BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>009500
MANNQNMAIPHGDGVDDSQSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSL
ECKQKLLCRVANANRGMRVVPPPPPERLPATDECFYVRESDENSGFQSLTIGQTDSLRKR
LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN
TGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFK
TALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRG
FRDQVMQIFRAISLPQILMYSATISQEVEKMSSSISKDIVVVSVGKPNMPNKAVKQLAIW
VESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKE
RREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEG
TAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRYTVGSFSSGKGFKKRKR

High Scoring Gene Products

Symbol, full name Information P value
AT3G02065 protein from Arabidopsis thaliana 2.6e-173
DDX59
Uncharacterized protein 		protein from Canis lupus familiaris 5.2e-113
DDX59
Probable ATP-dependent RNA helicase DDX59 		protein from Homo sapiens 1.4e-112
DDX59
Uncharacterized protein 		protein from Bos taurus 2.2e-112
Ddx59
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 		protein from Mus musculus 1.2e-111
DDX59
Uncharacterized protein 		protein from Sus scrofa 6.8e-111
DDX59
Uncharacterized protein 		protein from Gallus gallus 7.0e-109
ddx59
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 		gene_product from Danio rerio 1.3e-102
DDX59
Uncharacterized protein 		protein from Canis lupus familiaris 1.1e-101
DDX59
Probable ATP-dependent RNA helicase DDX59 		protein from Homo sapiens 4.9e-101
RH20
RNA helicase 20 		protein from Arabidopsis thaliana 6.2e-62
DDX3X
Uncharacterized protein 		protein from Sus scrofa 2.1e-61
DDX3X
Uncharacterized protein 		protein from Bos taurus 3.4e-61
DDX3X
Uncharacterized protein 		protein from Canis lupus familiaris 3.4e-61
DDX3X
Uncharacterized protein 		protein from Canis lupus familiaris 3.4e-61
DDX3X
ATP-dependent RNA helicase DDX3X 		protein from Homo sapiens 3.4e-61
AT3G58570 protein from Arabidopsis thaliana 7.1e-61
AT2G42520 protein from Arabidopsis thaliana 9.0e-61
DDX3X
Uncharacterized protein 		protein from Gallus gallus 1.2e-60
DDX3X
Uncharacterized protein 		protein from Gallus gallus 1.9e-60
DDX3Y
ATP-dependent RNA helicase DDX3Y 		protein from Homo sapiens 2.4e-60
DDX3Y
ATP-dependent RNA helicase DDX3Y 		protein from Homo sapiens 2.4e-60
Ddx3x
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked 		protein from Mus musculus 2.4e-60
Ddx3x
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked 		gene from Rattus norvegicus 2.4e-60
DDX3Y
Uncharacterized protein 		protein from Bos taurus 3.1e-60
D1Pas1
DNA segment, Chr 1, Pasteur Institute 1 		protein from Mus musculus 8.1e-60
RGD1309586
similar to probable ATP-dependent RNA helicase - mouse 		gene from Rattus norvegicus 8.1e-60
DDX3Y
Uncharacterized protein 		protein from Sus scrofa 2.2e-59
Ddx3y
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked 		protein from Mus musculus 2.2e-59
laf-1 gene from Caenorhabditis elegans 2.2e-59
ddx17
DEAD/DEAH box helicase 		gene from Dictyostelium discoideum 2.7e-59
AT3G58510 protein from Arabidopsis thaliana 5.7e-59
Ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 		gene from Rattus norvegicus 1.3e-58
DDX23
DDX23 protein 		protein from Bos taurus 1.3e-58
DDX23
Uncharacterized protein 		protein from Canis lupus familiaris 1.3e-58
DDX23
Probable ATP-dependent RNA helicase DDX23 		protein from Homo sapiens 1.3e-58
orf19.7392 gene_product from Candida albicans 1.5e-58
Ddx3y
DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked 		gene from Rattus norvegicus 2.5e-58
ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 		gene_product from Danio rerio 4.3e-58
DBP2
ATP-dependent RNA helicase of the DEAD-box protein family 		gene from Saccharomyces cerevisiae 2.2e-57
AT5G63120 protein from Arabidopsis thaliana 2.2e-57
DRH1
DEAD box RNA helicase 1 		protein from Arabidopsis thaliana 3.6e-57
DBP2 gene_product from Candida albicans 5.9e-57
vbh-1 gene from Caenorhabditis elegans 7.5e-57
DBP1
Putative ATP-dependent RNA helicase of the DEAD-box protein family 		gene from Saccharomyces cerevisiae 1.6e-56
DED1
ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase 		gene from Saccharomyces cerevisiae 1.6e-56
AT5G14610 protein from Arabidopsis thaliana 2.3e-56
CG10333 protein from Drosophila melanogaster 2.4e-56
DDX4
Uncharacterized protein 		protein from Canis lupus familiaris 8.6e-56
DDX4
Probable ATP-dependent RNA helicase DDX4 		protein from Homo sapiens 8.6e-56
DDX4
Probable ATP-dependent RNA helicase DDX4 		protein from Homo sapiens 8.6e-56
DDX4
Probable ATP-dependent RNA helicase DDX4 		protein from Sus scrofa 8.6e-56
DBP2
ATP-dependent RNA helicase DBP2 		protein from Magnaporthe oryzae 70-15 1.1e-55
DDX4
Probable ATP-dependent RNA helicase DDX4 		protein from Macaca fascicularis 1.1e-55
ddx4
Probable ATP-dependent RNA helicase DDX4 		protein from Pelophylax lessonae 1.8e-55
PF14_0437
helicase, truncated, putative 		gene from Plasmodium falciparum 2.9e-55
PF14_0437
Helicase, putative 		protein from Plasmodium falciparum 3D7 2.9e-55
SO_3783
ATP-dependent RNA helicase, DEAD box family 		protein from Shewanella oneidensis MR-1 2.9e-55
Ddx4
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 		protein from Mus musculus 2.9e-55
CG10077 protein from Drosophila melanogaster 3.0e-55
DDX46
Uncharacterized protein 		protein from Bos taurus 4.0e-55
Ddx4
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 		gene from Rattus norvegicus 6.1e-55
Ddx4
Probable ATP-dependent RNA helicase DDX4 		protein from Rattus norvegicus 6.1e-55
DDX17
Uncharacterized protein 		protein from Gallus gallus 7.8e-55
DDX46
Probable ATP-dependent RNA helicase DDX46 		protein from Homo sapiens 1.1e-54
DDX46
Uncharacterized protein 		protein from Canis lupus familiaris 1.1e-54
DDX46
Uncharacterized protein 		protein from Sus scrofa 1.1e-54
Ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 		protein from Mus musculus 1.1e-54
Ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 		gene from Rattus norvegicus 1.1e-54
AT3G06480 protein from Arabidopsis thaliana 1.7e-54
olvas
VASA 		protein from Oryzias latipes 2.1e-54
DDX17
DDX17 protein 		protein from Bos taurus 2.6e-54
DDX17
Uncharacterized protein 		protein from Canis lupus familiaris 2.6e-54
DDX17
Uncharacterized protein 		protein from Canis lupus familiaris 2.6e-54
DDX17
Probable ATP-dependent RNA helicase DDX17 		protein from Homo sapiens 2.6e-54
DDX17
Probable ATP-dependent RNA helicase DDX17 		protein from Homo sapiens 2.6e-54
DDX17
Uncharacterized protein 		protein from Sus scrofa 2.6e-54
Ddx17
DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 		protein from Mus musculus 2.6e-54
DDX4
Probable ATP-dependent RNA helicase DDX4 		protein from Bos taurus 3.4e-54
DDX4
Probable ATP-dependent RNA helicase DDX4 		protein from Bos taurus 3.4e-54
DDX52
Probable ATP-dependent RNA helicase DDX52 		protein from Homo sapiens 3.4e-54
DDX52
Probable ATP-dependent RNA helicase DDX52 		protein from Homo sapiens 3.4e-54
DDX4
Uncharacterized protein 		protein from Gallus gallus 5.5e-54
LOC100859810
Uncharacterized protein 		protein from Gallus gallus 7.0e-54
sacy-1 gene from Caenorhabditis elegans 7.0e-54
rhlE
ATP-dependent RNA helicase 		protein from Coxiella burnetii RSA 493 1.1e-53
SO_2571
ATP-dependent RNA helicase DEAD box family 		protein from Shewanella oneidensis MR-1 1.1e-53
VC_A0204
ATP-dependent RNA helicase RhlE 		protein from Vibrio cholerae O1 biovar El Tor str. N16961 1.1e-53
CBU_0670
ATP-dependent RNA helicase RhlE, putative 		protein from Coxiella burnetii RSA 493 1.1e-53
SO_1383
ATP-dependent RNA helicase, DEAD box family 		protein from Shewanella oneidensis MR-1 1.1e-53
SO_2571
ATP-dependent RNA helicase, DEAD box family 		protein from Shewanella oneidensis MR-1 1.1e-53
VC_A0204
ATP-dependent RNA helicase RhlE 		protein from Vibrio cholerae O1 biovar El Tor 1.1e-53
Ddx52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 		protein from Mus musculus 1.1e-53
ddx5
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 		gene_product from Danio rerio 1.5e-53

The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  009500
        (533 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2828586 - symbol:AT3G02065 species:3702 "Arabi...  1684  2.6e-173  1
UNIPROTKB|E2R4Y9 - symbol:DDX59 "Uncharacterized protein"...  1115  5.2e-113  1
UNIPROTKB|Q5T1V6 - symbol:DDX59 "Probable ATP-dependent R...  1111  1.4e-112  1
UNIPROTKB|G3X7G8 - symbol:DDX59 "Uncharacterized protein"...  1109  2.2e-112  1
MGI|MGI:1915247 - symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) bo...  1102  1.2e-111  1
UNIPROTKB|I3LV06 - symbol:DDX59 "Uncharacterized protein"...  1095  6.8e-111  1
UNIPROTKB|E1BXX5 - symbol:DDX59 "Uncharacterized protein"...  1076  7.0e-109  1
ZFIN|ZDB-GENE-050208-665 - symbol:ddx59 "DEAD (Asp-Glu-Al...  1017  1.3e-102  1
UNIPROTKB|E2R4Z9 - symbol:DDX59 "Uncharacterized protein"...  1008  1.1e-101  1
UNIPROTKB|B7Z5N6 - symbol:DDX59 "cDNA FLJ56549, highly si...  1002  4.9e-101  1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie...   633  6.2e-62   1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"...   628  2.1e-61   1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"...   626  3.4e-61   1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"...   626  3.4e-61   1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"...   626  3.4e-61   1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica...   626  3.4e-61   1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi...   623  7.1e-61   1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi...   622  9.0e-61   1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"...   621  1.2e-60   1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"...   619  1.9e-60   1
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"...   618  2.4e-60   1
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica...   618  2.4e-60   1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi...   618  2.4e-60   1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po...   618  2.4e-60   1
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"...   617  3.1e-60   1
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu...   613  8.1e-60   1
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-...   613  8.1e-60   1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme...   589  1.6e-59   2
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"...   609  2.2e-59   1
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo...   609  2.2e-59   1
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd...   609  2.2e-59   1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli...   608  2.7e-59   1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi...   605  5.7e-59   1
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po...   360  1.3e-58   2
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"...   360  1.3e-58   2
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"...   360  1.3e-58   2
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R...   360  1.3e-58   2
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ...   601  1.5e-58   1
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po...   599  2.5e-58   1
ZFIN|ZDB-GENE-030131-6215 - symbol:ddx23 "DEAD (Asp-Glu-A...   358  4.3e-58   2
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ...   590  2.2e-57   1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi...   590  2.2e-57   1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation...   589  2.8e-57   1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1...   588  3.6e-57   1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer...   586  5.9e-57   1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica...   586  5.9e-57   1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd...   585  7.5e-57   1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ...   582  1.6e-56   1
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu...   582  1.6e-56   1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi...   533  2.3e-56   2
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ...   357  2.4e-56   2
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ...   575  8.6e-56   1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN...   575  8.6e-56   1
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN...   575  8.6e-56   1
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN...   575  8.6e-56   1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas...   574  1.1e-55   1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN...   574  1.1e-55   1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN...   572  1.8e-55   1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase...   570  2.9e-55   1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ...   570  2.9e-55   1
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli...   570  2.9e-55   1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ...   570  2.9e-55   1
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN...   570  2.9e-55   1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ...   571  3.0e-55   1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"...   577  4.0e-55   1
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol...   567  6.1e-55   1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN...   567  6.1e-55   1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"...   566  7.8e-55   1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R...   573  1.1e-54   1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"...   573  1.1e-54   1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"...   573  1.1e-54   1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo...   573  1.1e-54   1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol...   573  1.1e-54   1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R...   573  1.1e-54   1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi...   572  1.7e-54   1
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz...   562  2.1e-54   1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli...   562  2.1e-54   1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"...   561  2.6e-54   1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"...   561  2.6e-54   1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"...   561  2.6e-54   1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R...   561  2.6e-54   1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R...   561  2.6e-54   1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"...   561  2.6e-54   1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo...   561  2.6e-54   1
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN...   560  3.4e-54   1
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN...   560  3.4e-54   1
UNIPROTKB|A8MTP9 - symbol:DDX52 "Probable ATP-dependent R...   560  3.4e-54   1
UNIPROTKB|Q9Y2R4 - symbol:DDX52 "Probable ATP-dependent R...   560  3.4e-54   1
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ...   558  5.5e-54   1
UNIPROTKB|F1NAH6 - symbol:LOC100859810 "Uncharacterized p...   557  7.0e-54   1
WB|WBGene00019245 - symbol:sacy-1 species:6239 "Caenorhab...   557  7.0e-54   1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas...   555  1.1e-53   1
UNIPROTKB|Q8EE19 - symbol:SO_2571 "ATP-dependent RNA heli...   555  1.1e-53   1
UNIPROTKB|Q9KMW4 - symbol:VC_A0204 "ATP-dependent RNA hel...   555  1.1e-53   1
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he...   555  1.1e-53   1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli...   555  1.1e-53   1
TIGR_CMR|SO_2571 - symbol:SO_2571 "ATP-dependent RNA heli...   555  1.1e-53   1
TIGR_CMR|VC_A0204 - symbol:VC_A0204 "ATP-dependent RNA he...   555  1.1e-53   1
MGI|MGI:1925644 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) bo...   555  1.1e-53   1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala...   554  1.5e-53   1

WARNING:  Descriptions of 869 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2828586 [details] [associations]
            symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
            PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
            EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
            RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
            UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
            PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
            EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
            GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
            ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
        Length = 505

 Score = 1684 (597.9 bits), Expect = 2.6e-173, P = 2.6e-173
 Identities = 338/506 (66%), Positives = 403/506 (79%)

Query:    13 DGVDDSQSDV-KEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCRVA 71
             +G     SDV K+ S DQR  L  EPKCVIC RYGEYICDET+DDVCSLECKQ LL RV 
Sbjct:     4 EGCVPHNSDVVKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALLRRVD 63

Query:    72 NANRGMRXXXXXXXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGD--A 129
             +A               PATDECFYVR+   +S    L       LR++L+I+V+G   A
Sbjct:    64 SARV------------FPATDECFYVRDPGSSSHDAQL-------LRRKLDIHVQGQGSA 104

Query:   130 VPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASF 189
             VP P+L+F+SC L  KLL N+E AGYD PTP+QMQAIP+AL+GKSLL SA+TGSGKTASF
Sbjct:   105 VPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASF 164

Query:   190 LVPVISQCANIRLHHSQNQK-NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGD 248
             LVP+IS+C      H  +Q+ NPLAMVL PTRELC+QVE+QAK+LGKGLPFKTALVVGGD
Sbjct:   165 LVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGD 224

Query:   249 AMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQI 308
              M+ Q+YRIQQGVELI+GTPGR++DLL KH IELD+I  FVLDEVDCMLQRGFRDQVMQI
Sbjct:   225 PMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQI 284

Query:   309 FRAISLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQ 368
             F+A+S PQ+L++SATIS+EVEK+             G PN PNKAV QLAIWV++ +KKQ
Sbjct:   285 FQALSQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQ 344

Query:   369 KLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSF 428
             KLFDIL S+ HF PPAVVYV SR+GADLL+NAI+V TG+KALSIHGEKPMKERR++M SF
Sbjct:   345 KLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSF 404

Query:   429 LVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNE 488
             L GEVPV+V+TG+LGRGV+LL VRQVI+FDMP++IKEY+H IGRAS+MG++GTAIVFVNE
Sbjct:   405 LGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNE 464

Query:   489 ENKNLFQELVDILKSSGAGIPRELIN 514
             +++NLF +LV  LKSSGA IP+ELIN
Sbjct:   465 DDRNLFPDLVAALKSSGAAIPKELIN 490


>UNIPROTKB|E2R4Y9 [details] [associations]
            symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
            Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
        Length = 623

 Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
 Identities = 226/507 (44%), Positives = 330/507 (65%)

Query:    14 GVDDSQSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCRVANA 73
             G D S+  VK +SK QR A P EP CV+CGRYGEYICD+TD+DVCSLECK K L +V   
Sbjct:    84 GSDLSEEPVKSFSKTQRWAEPGEPVCVVCGRYGEYICDKTDEDVCSLECKAKHLLQVKEK 143

Query:    74 NRGMRXXXXXXXERLPATD-ECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPA 132
                ++          P +     YV +  E+    +L   Q ++L+++L I V+G  V  
Sbjct:   144 EERLKLSAPHKANSEPESPLNTLYVYK--EHPFILNLQEDQIENLKRQLGIVVQGQDVTR 201

Query:   133 PILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVP 192
             PI+ F  C   + L  N++ +GY++PTP+QMQ IP  L G+ +L SA+TGSGKTA+FL+P
Sbjct:   202 PIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLP 261

Query:   193 VISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGDAMA 251
             VI++     L  S   K P A++LTPTREL IQ+E QAK L  GLP  KT L+VGG  + 
Sbjct:   262 VITRA----LCES---KTPSALILTPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPLP 314

Query:   252 RQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRA 311
              Q+YR++Q V++I+ TPGRL+D++ +  +EL  I++ V+DE D ML+ GF+ QV+ I   
Sbjct:   315 PQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLKMGFQQQVLDILEH 374

Query:   312 I-SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKL 370
             + +  Q ++ SATI   +E++             G+ N+P  +V+Q+ +WVE   KK+KL
Sbjct:   375 VPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCSSVRQIILWVEEPAKKKKL 434

Query:   371 FDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
             F+IL  K+ F PP +V+V  +LGADLLS A+   TG+K++SIH EK   ER+ I++  L 
Sbjct:   435 FEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSVSIHSEKSQTERKNILKGLLE 494

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN 490
             G+  V+V+TG+LGRG++L+ VR V+ FDMP+S+ EYVHQ+GR  ++G  GTAI F+N  +
Sbjct:   495 GDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQVGRVGRLGQNGTAITFINNNS 554

Query:   491 KNLFQELVDILKSSGAGIPRELINSRY 517
             K LF ++   +K +G+ +P +L+NS Y
Sbjct:   555 KRLFWDIAKRVKPTGSILPPQLLNSPY 581


>UNIPROTKB|Q5T1V6 [details] [associations]
            symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
            GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
            IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
            UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
            SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
            PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
            Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
            CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
            neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
            HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
            EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
            ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
            Genevestigator:Q5T1V6 Uniprot:Q5T1V6
        Length = 619

 Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
 Identities = 228/503 (45%), Positives = 327/503 (65%)

Query:    18 SQSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCRVANANRGM 77
             S+  VK +SK QR A P EP CV+CGRYGEYICD+TD+DVCSLECK K L +V       
Sbjct:    87 SEEPVKSFSKTQRWAEPGEPICVVCGRYGEYICDKTDEDVCSLECKAKHLLQVKEKEEKS 146

Query:    78 RXXXXXXXERLPATD-ECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILS 136
             +       +  P +     YV +  E+    +L   Q ++L+++L I V+G  V  PI+ 
Sbjct:   147 KLSNPQKADSEPESPLNASYVYK--EHPFILNLQEDQIENLKQQLGILVQGQEVTRPIID 204

Query:   137 FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 196
             F  CSL + L  N++ +GY++PTP+QMQ IP  L G+ +L SA+TGSGKTA+FL+PVI +
Sbjct:   205 FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMR 264

Query:   197 CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGDAMARQVY 255
                  L  S   K P A++LTPTREL IQ+E QAK L  GLP  KT L+VGG  +  Q+Y
Sbjct:   265 A----LFES---KTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLY 317

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315
             R+QQ V++I+ TPGRL+D++ +  +EL  +++ V+DE D ML+ GF+ QV+ I   I   
Sbjct:   318 RLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPND 377

Query:   316 -QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDIL 374
              Q ++ SATI   +E++             G+ N+P   V+Q+ +WVE   KK+KLF+IL
Sbjct:   378 CQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEIL 437

Query:   375 MSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVP 434
               K+ F PP +V+V  +LGADLLS A+   TG+K++SIH EK   ER+ I++  L G+  
Sbjct:   438 NDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYE 497

Query:   435 VIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLF 494
             V+V+TG+LGRG++L+ VR V+ FDMP+S+ EYVHQIGR  ++G  GTAI F+N  +K LF
Sbjct:   498 VVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSKRLF 557

Query:   495 QELVDILKSSGAGIPRELINSRY 517
              ++   +K +G+ +P +L+NS Y
Sbjct:   558 WDIAKRVKPTGSILPPQLLNSPY 580


>UNIPROTKB|G3X7G8 [details] [associations]
            symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
            RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
            GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
        Length = 620

 Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
 Identities = 225/505 (44%), Positives = 327/505 (64%)

Query:    16 DDSQSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCRVANANR 75
             D  +  VK +SK QR+A P EP CV+CGRYGEY+CDETD+DVCSLECK K L +V     
Sbjct:    86 DLPEEPVKSFSKTQRQAEPGEPICVVCGRYGEYVCDETDEDVCSLECKAKHLLQVRGVEA 145

Query:    76 GMRXXXXXXXERLPATD-ECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPI 134
                          PA      YV    E++    L   Q ++LR++L I V+G  VP PI
Sbjct:   146 ASEPSRPQKAGSEPAAPGPAPYVYT--EHAFVSHLREDQIENLRRQLGITVRGRGVPRPI 203

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + F  C   + L +N++A+GY++PTP+QMQ IP  L G+ +L SA+TGSGKTA+FL+PVI
Sbjct:   204 VDFEHCGFPEALNRNLKASGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVI 263

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGDAMARQ 253
              +        SQ+ K+P  +VLTPTREL IQ+E QAK L  GLP  +TAL+VGG     Q
Sbjct:   264 LRAL------SQS-KSPSGLVLTPTRELAIQIERQAKELMSGLPCLRTALLVGGLPAPPQ 316

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS 313
              +R++Q +++I+ TPGRL+D++ +  +EL  I++ V+DE D ML+ GF+ QV+ +   + 
Sbjct:   317 RHRLRQRIQVIIATPGRLLDIIKQRSVELGSIKIVVVDEADTMLKMGFQQQVLDVLEQLP 376

Query:   314 LP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                Q ++ SATI   VE++             G+ N+P  +V+Q+ +WVE   KK+KLF+
Sbjct:   377 HDCQTVLASATIPASVEQLACQLLRDPVAITAGERNLPCPSVRQIVLWVEEPAKKKKLFE 436

Query:   373 ILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
             IL  K+ F PP +V+V  +LGADLLS A+   TG+K+ S+H +K   ER+ I++  L G+
Sbjct:   437 ILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSTSVHSDKTQMERKNILKGLLEGD 496

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492
               V+V+TG+LGRG++L+GV+ V+ FDMP+S+ EYVHQIGR  ++G  GTAI F+N  +K 
Sbjct:   497 YDVVVSTGVLGRGLDLVGVKLVVNFDMPSSMDEYVHQIGRVGRLGQHGTAITFINNNSKR 556

Query:   493 LFQELVDILKSSGAGIPRELINSRY 517
             LF ++   +K +G+ +P +L+NS Y
Sbjct:   557 LFWDIAKRVKPTGSLLPPQLLNSPY 581


>MGI|MGI:1915247 [details] [associations]
            symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
            GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
            Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
            HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
            EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
            RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
            ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
            PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
            UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
            ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
            Genevestigator:Q9DBN9 Uniprot:Q9DBN9
        Length = 619

 Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
 Identities = 226/511 (44%), Positives = 331/511 (64%)

Query:    13 DGVDDS---QSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCR 69
             +GV DS   +  VK +SK QR   P EP CV+CGRYGEYICD+TD+DVCSLECK K L +
Sbjct:    79 EGVKDSHPSEEPVKSFSKTQRWPEPGEPVCVVCGRYGEYICDKTDEDVCSLECKAKHLLQ 138

Query:    70 VANANRGMRXXXXXXXERLPATD-ECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGD 128
             V      +R          P +  + FYV +  E+    +L   Q ++L+++L I+V+G 
Sbjct:   139 VKEGEGSLRPSSPQRVAAEPESPLDAFYVYK--EHPFIVTLKEDQIETLKQQLGISVQGQ 196

Query:   129 AVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTAS 188
              V  PI+ F  C   + L QN++ +GY++PTP+QMQ IP  L G+ +L SA+TGSGKTA+
Sbjct:   197 DVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAA 256

Query:   189 FLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGG 247
             FL+PVI     IR   S++ K P A++LTPTREL IQ+E QAK L  GLP  KT L+VGG
Sbjct:   257 FLLPVI-----IRAF-SED-KTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGG 309

Query:   248 DAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQ 307
               +  Q+YR++Q V++I+ TPGRL+D++ +  + L  I++ V+DE D ML+ GF+ QV+ 
Sbjct:   310 LPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVSLSGIKIVVVDEADTMLKMGFQQQVLD 369

Query:   308 IFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKK 366
             +        Q ++ SATI   +E++             G  N+P  +V+Q+ +WVE   K
Sbjct:   370 VLEHTPGDCQTILVSATIPDSIEQLTDQLLHNPVRIITGDKNLPCASVRQIILWVEDPAK 429

Query:   367 KQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMR 426
             K+KLF+IL  ++ F PP +V+V  +LGADLLS A+   TG+ + SIH EK   ERR+I++
Sbjct:   430 KKKLFEILNDQKLFKPPVLVFVDCKLGADLLSEAVQKITGLNSTSIHSEKSQVERRDILK 489

Query:   427 SFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV 486
               L G+  V+V+TG+LGRG++L+ V+ V+ FDMP+S+ EYVHQ+GR  ++G  GTAI F+
Sbjct:   490 GLLEGDYEVVVSTGVLGRGLDLVNVKLVVNFDMPSSMDEYVHQVGRVGRLGQNGTAITFI 549

Query:   487 NEENKNLFQELVDILKSSGAGIPRELINSRY 517
             N  +K LF ++   +K +G+ +P +L+NS Y
Sbjct:   550 NNNSKRLFWDVAKRVKPTGSILPPQLLNSPY 580


>UNIPROTKB|I3LV06 [details] [associations]
            symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
            Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
            Uniprot:I3LV06
        Length = 607

 Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
 Identities = 228/514 (44%), Positives = 331/514 (64%)

Query:     7 MAIPHGDGVDD-SQSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQK 65
             +A P  +  D+  +  VK +SK QR A P EP CV+CGR+GEYICDETD+DVCSLECK K
Sbjct:    65 LAGPEQEAQDNLPEEPVKSFSKTQRWAEPGEPVCVVCGRFGEYICDETDEDVCSLECKAK 124

Query:    66 LLCRVANANRGMRXXXXXXXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINV 125
              L +V  A    R           A     YV    E++   +L   Q ++LR +L I V
Sbjct:   125 HLLQVRAAEE-QREPPQEGSSEPGAPCPASYVYT--EHAFISNLREDQIENLRGQLGIVV 181

Query:   126 KGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGK 185
             +G  VP PI+ F  C   + L  N++ AGY++PTP+QMQ IP  L G+ LL SA+TGSGK
Sbjct:   182 EGRGVPRPIIDFGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTGSGK 241

Query:   186 TASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALV 244
             TA+FL+PVI++     L  S   K P A+VLTPTREL IQ+E QAK L  GLP  +TAL+
Sbjct:   242 TAAFLLPVITRA----LVQS---KAPSALVLTPTRELAIQIERQAKELMGGLPRMRTALL 294

Query:   245 VGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQ 304
             VGG     Q++R++Q V++I+ TPGRL+D++ +  ++L +I++ V+DE D ML+ GF++Q
Sbjct:   295 VGGLPAPPQLHRLRQRVQVIIATPGRLLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQ 354

Query:   305 VMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVES 363
             V+ +   +    Q ++ SATI   +E++             G+ N+P  +V+Q+ +WVE 
Sbjct:   355 VLDVLENVPQDCQTILVSATIPTRIEQLASRLLHDPVRVLAGEKNLPCPSVRQIVLWVEE 414

Query:   364 NKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERRE 423
               KK+KLF+IL  K+ F PP +V+V  +LGADLLS A+   TG+K+ S+H EK   ER+ 
Sbjct:   415 PAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVEKITGLKSTSMHSEKSQIERKT 474

Query:   424 IMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAI 483
             I+   L G+  V+V+TG+LGRG++L+ V+ V+ FDMP+S+ EYVHQ+GR  ++G  GTAI
Sbjct:   475 ILEGLLEGDYDVVVSTGVLGRGLDLISVKLVVNFDMPSSMDEYVHQVGRVGRLGQNGTAI 534

Query:   484 VFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
              F+N  +K LF ++   +K +G+ +P +L+NS Y
Sbjct:   535 TFINNNSKRLFWDIAKRVKPTGSLLPPQLLNSPY 568


>UNIPROTKB|E1BXX5 [details] [associations]
            symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
            RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
            Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
            NextBio:20826688 Uniprot:E1BXX5
        Length = 625

 Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
 Identities = 220/510 (43%), Positives = 325/510 (63%)

Query:    12 GDGVDDSQSD--VKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCR 69
             G+  +DS S+  VK +SK QR A P EP CV+CGRYGEYICD+TD+DVCSLECK K L +
Sbjct:    84 GNTAEDSSSEEPVKSFSKSQRWAEPGEPVCVVCGRYGEYICDKTDEDVCSLECKAKHLLQ 143

Query:    70 VANANRGMRXXXXXXXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDA 129
             +      ++       E    +          ++S   SL   Q ++L+ +L I ++G  
Sbjct:   144 MQEKEEKLKSAHLAKGESQEESHLLNTAYFYKDHSFILSLQDEQVENLKLQLGIAIQGQQ 203

Query:   130 VPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASF 189
             VP PI+ F  C   + L  N++ +GY++PTP+QMQ IP  L G+ ++ SA+TGSGKTA+F
Sbjct:   204 VPRPIIEFEHCGFPETLNSNLKNSGYEVPTPIQMQMIPVGLLGRDIVASADTGSGKTAAF 263

Query:   190 LVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGD 248
             L+PVI +  N         + P A++L PTREL IQ+E QAK L  GLP  +T L+VGG 
Sbjct:   264 LLPVIMKVLN-------ETETPSALILAPTRELAIQIERQAKELMAGLPNMRTVLLVGGL 316

Query:   249 AMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQI 308
              +  Q++R++Q V++I+ TPGRL+++L +  ++L  I++ V+DEVD ML+ GF+ QV+ I
Sbjct:   317 PLPPQLHRLKQSVKVIIATPGRLLEILRQSSVQLHGIKIVVVDEVDTMLKMGFQQQVLDI 376

Query:   309 FRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKK 367
                IS   Q ++ SATI   +E +             G+ N+P   V+Q+ +WVE   KK
Sbjct:   377 LEDISHDHQTILVSATIPVGIEHLANQLLHNFVRITIGEKNLPCSNVRQIILWVEEPSKK 436

Query:   368 QKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRS 427
             +KLF+IL  K+ F PP +V+V  +LGADLLS+A+   TG++  S+H EK   ER  I++ 
Sbjct:   437 KKLFEILNDKKLFKPPVLVFVDCKLGADLLSDAVHKITGLQCTSMHSEKSQVERTAILQG 496

Query:   428 FLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVN 487
              L  +  VIV+TG+LGRG++L+ V+ V+ FDMP+S+ EYVHQ+GRA ++G  GTAI F+N
Sbjct:   497 LLQEKYEVIVSTGVLGRGLDLVNVKLVVNFDMPSSMDEYVHQVGRAGRLGHSGTAITFIN 556

Query:   488 EENKNLFQELVDILKSSGAGIPRELINSRY 517
               +K LF ++V  +K +G  +P +L+NS Y
Sbjct:   557 NNSKKLFWDVVKRVKPTGTILPPQLLNSPY 586


>ZFIN|ZDB-GENE-050208-665 [details] [associations]
            symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
            Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
            IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
            Uniprot:F1R8P9
        Length = 584

 Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
 Identities = 205/499 (41%), Positives = 312/499 (62%)

Query:    19 QSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCRVANANRGMR 78
             +  VK + K QR   P EP CV+CGRYGEYICD+TD+D+CSLECK   L  V  A+ G +
Sbjct:    58 EEPVKSFKKSQRWPEPGEPVCVMCGRYGEYICDKTDNDICSLECKAAHLAAVC-ADFGDK 116

Query:    79 XXXXXXXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFS 138
                    +  P + E        +++    LT  Q + ++  L I   G  V  P++ F 
Sbjct:   117 LFNN---KNTPESSENTKSYSYKQDAFISELTEEQIERVKAELGIVSVGTEVCRPVIEFQ 173

Query:   139 SCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCA 198
              C     L +N++AAGY+ PTPVQMQ +P  L+G+ ++ +A+TGSGKT +FL+PV+ +  
Sbjct:   174 HCRFPTVLERNLKAAGYEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRAL 233

Query:   199 NIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGDAMARQVYRI 257
                   S +   P  ++LTPTREL IQ+EEQAK L +GLP  +TAL+VGG  +  Q++R+
Sbjct:   234 Q---SESASPSCPACLILTPTRELAIQIEEQAKELMRGLPNMRTALLVGGMPLPPQLHRL 290

Query:   258 QQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-Q 316
             +  +++++GTPGRL+++L +  ++LD +R  V+DE D ML+ GF+ QV+ I   +    Q
Sbjct:   291 KHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADTMLKMGFQQQVLDILEQVPEDHQ 350

Query:   317 ILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMS 376
              L+ SATI    +++             G+ N P   V+Q+ +WVE   KK+KLF+IL  
Sbjct:   351 TLLTSATIPTGTQQLAERLTHDPVTITIGQKNQPCANVRQIVLWVEEPSKKKKLFEILND 410

Query:   377 KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVI 436
             ++ + PP VV+V  +LGADLL  A+     +  ++IH +K   ER +I++  L G+  V+
Sbjct:   411 EKLYQPPVVVFVDCKLGADLLCEAVQKVMSLNTVAIHSDKMQWERNKIVKGLLEGQFDVV 470

Query:   437 VATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQE 496
             ++TGILGRG++L+ V+ VI FDMP+++ EYVHQIGRA ++G  GTAI F+N  NK LF E
Sbjct:   471 ISTGILGRGLDLVNVKLVINFDMPSNMDEYVHQIGRAGRLGHRGTAITFMNNNNKRLFLE 530

Query:   497 LVDILKSSGAGIPRELINS 515
             +V  +K +G+ +P +++NS
Sbjct:   531 MVKRVKPTGSILPPQILNS 549


>UNIPROTKB|E2R4Z9 [details] [associations]
            symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
            Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
        Length = 569

 Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
 Identities = 207/460 (45%), Positives = 299/460 (65%)

Query:    14 GVDDSQSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCRVANA 73
             G D S+  VK +SK QR A P EP CV+CGRYGEYICD+TD+DVCSLECK K L +V   
Sbjct:    84 GSDLSEEPVKSFSKTQRWAEPGEPVCVVCGRYGEYICDKTDEDVCSLECKAKHLLQVKEK 143

Query:    74 NRGMRXXXXXXXERLPATD-ECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPA 132
                ++          P +     YV +  E+    +L   Q ++L+++L I V+G  V  
Sbjct:   144 EERLKLSAPHKANSEPESPLNTLYVYK--EHPFILNLQEDQIENLKRQLGIVVQGQDVTR 201

Query:   133 PILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVP 192
             PI+ F  C   + L  N++ +GY++PTP+QMQ IP  L G+ +L SA+TGSGKTA+FL+P
Sbjct:   202 PIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLP 261

Query:   193 VISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGDAMA 251
             VI++     L  S   K P A++LTPTREL IQ+E QAK L  GLP  KT L+VGG  + 
Sbjct:   262 VITRA----LCES---KTPSALILTPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPLP 314

Query:   252 RQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRA 311
              Q+YR++Q V++I+ TPGRL+D++ +  +EL  I++ V+DE D ML+ GF+ QV+ I   
Sbjct:   315 PQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLKMGFQQQVLDILEH 374

Query:   312 I-SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKL 370
             + +  Q ++ SATI   +E++             G+ N+P  +V+Q+ +WVE   KK+KL
Sbjct:   375 VPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCSSVRQIILWVEEPAKKKKL 434

Query:   371 FDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
             F+IL  K+ F PP +V+V  +LGADLLS A+   TG+K++SIH EK   ER+ I++  L 
Sbjct:   435 FEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSVSIHSEKSQTERKNILKGLLE 494

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQI 470
             G+  V+V+TG+LGRG++L+ VR V+ FDMP+S+ EYVHQ+
Sbjct:   495 GDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQV 534


>UNIPROTKB|B7Z5N6 [details] [associations]
            symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
            DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
            variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
            Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
            HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
            EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
            UCSC:uc010ppl.1 Uniprot:B7Z5N6
        Length = 567

 Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
 Identities = 208/456 (45%), Positives = 296/456 (64%)

Query:    18 SQSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCRVANANRGM 77
             S+  VK +SK QR A P EP CV+CGRYGEYICD+TD+DVCSLECK K L +V       
Sbjct:    87 SEEPVKSFSKTQRWAEPGEPICVVCGRYGEYICDKTDEDVCSLECKAKHLLQVKEKEEKS 146

Query:    78 RXXXXXXXERLPATD-ECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILS 136
             +       +  P +     YV +  E+    +L   Q ++L+++L I V+G  V  PI+ 
Sbjct:   147 KLSNPQKADSEPESPLNASYVYK--EHPFILNLQEDQIENLKQQLGILVQGQEVTRPIID 204

Query:   137 FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 196
             F  CSL + L  N++ +GY++PTP+QMQ IP  L G+ +L SA+TGSGKTA+FL+PVI +
Sbjct:   205 FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMR 264

Query:   197 CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGDAMARQVY 255
                  L  S   K P A++LTPTREL IQ+E QAK L  GLP  KT L+VGG  +  Q+Y
Sbjct:   265 A----LFES---KTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLY 317

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315
             R+QQ V++I+ TPGRL+D++ +  +EL  +++ V+DE D ML+ GF+ QV+ I   I   
Sbjct:   318 RLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPND 377

Query:   316 -QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDIL 374
              Q ++ SATI   +E++             G+ N+P   V+Q+ +WVE   KK+KLF+IL
Sbjct:   378 CQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEIL 437

Query:   375 MSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVP 434
               K+ F PP +V+V  +LGADLLS A+   TG+K++SIH EK   ER+ I++  L G+  
Sbjct:   438 NDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYE 497

Query:   435 VIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQI 470
             V+V+TG+LGRG++L+ VR V+ FDMP+S+ EYVHQ+
Sbjct:   498 VVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQL 533


>TAIR|locus:2035741 [details] [associations]
            symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
            IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
            UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
            PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
            KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
            OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
            Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
        Length = 501

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 146/442 (33%), Positives = 235/442 (53%)

Query:    74 NRGMRXXXXXXXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAP 133
             N G         + L   ++ FYV    E+    ++T  + +  RK  EI V+G  +P P
Sbjct:    42 NDGNESPRKLDLDGLTPFEKNFYV----ESPAVAAMTDTEVEEYRKLREITVEGKDIPKP 97

Query:   134 ILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPV 193
             + SF        +L+ ++ AG+  PTP+Q Q  P A+ G+ L+  A TGSGKT S+L+P 
Sbjct:    98 VKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPA 157

Query:   194 ISQC-ANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMAR 252
             I    A   L H      P+ +VL PTREL +Q++++A   G     KT  + GG     
Sbjct:   158 IVHVNAQPMLAHGDG---PIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGP 214

Query:   253 QVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI 312
             QV  +Q+GVE+++ TPGRLID++  ++  L  +   VLDE D ML  GF  Q+ +I   I
Sbjct:   215 QVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHI 274

Query:   313 SLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKKKQKL 370
                 Q L +SAT  +EVE++             G  ++  N+A++Q+   +  ++K  KL
Sbjct:   275 RPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKL 334

Query:   371 FDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
               +L      +   +V++ ++ G D ++  + +  G  ALSIHG+K   ER  ++  F  
Sbjct:   335 VKLLEDIMDGSR-ILVFLDTKKGCDQITRQLRMD-GWPALSIHGDKSQAERDWVLSEFRS 392

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN 490
             G+ P++ AT +  RG+++  V+ VI +D P S+++YVH+IGR  + G +GTA  F    N
Sbjct:   393 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVAN 452

Query:   491 KNLFQELVDILKSSGAGIPREL 512
                 +EL +IL+ +G  +  EL
Sbjct:   453 ARFAKELTNILQEAGQKVSPEL 474


>UNIPROTKB|F1RX16 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
            EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
        Length = 661

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 138/415 (33%), Positives = 230/415 (55%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   166 IPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 225

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ  +      +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   226 TGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 285

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   286 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 345

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   346 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 405

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAIS 402
             G+    ++ + Q  +WVE + K+  L D+L +  K   T   +V+V ++ GAD L + + 
Sbjct:   406 GRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLT---LVFVETKKGADSLEDFL- 461

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ 
Sbjct:   462 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSD 521

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             I+EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   522 IEEYVHRIGRTGRVGNLGLATSFFNERNANITKDLLDLLVEAKQEVPSWLENMAY 576


>UNIPROTKB|G5E631 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
            OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
            PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
            KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
        Length = 661

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 138/415 (33%), Positives = 230/415 (55%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   165 IPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 224

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ  +      +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   225 TGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 284

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   285 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 344

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   345 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 404

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAIS 402
             G+    ++ + Q  +WVE + K+  L D+L +  K   T   +V+V ++ GAD L + + 
Sbjct:   405 GRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLT---LVFVETKKGADSLEDFL- 460

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ 
Sbjct:   461 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSD 520

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             I+EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   521 IEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAY 575


>UNIPROTKB|E2RRQ7 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
            Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
        Length = 706

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 136/414 (32%), Positives = 229/414 (55%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   208 IPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 267

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ  +      +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   268 TGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 327

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   328 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 387

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   388 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 447

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPP-AVVYVGSRLGADLLSNAISV 403
             G+    ++ + Q  +WVE + K+  L D+L + +       +V+V ++ GAD L + +  
Sbjct:   448 GRVGSTSENITQKVVWVEESDKRSFLLDLLNATESGKDSLTLVFVETKKGADSLEDFL-Y 506

Query:   404 TTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSI 463
               G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ I
Sbjct:   507 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 566

Query:   464 KEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             +EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   567 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAY 620


>UNIPROTKB|J9P0V9 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
            RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
            KEGG:cfa:480886 Uniprot:J9P0V9
        Length = 662

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 138/415 (33%), Positives = 230/415 (55%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   166 IPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 225

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ  +      +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   226 TGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 285

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   286 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 345

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   346 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 405

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAIS 402
             G+    ++ + Q  +WVE + K+  L D+L +  K   T   +V+V ++ GAD L + + 
Sbjct:   406 GRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLT---LVFVETKKGADSLEDFL- 461

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ 
Sbjct:   462 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSD 521

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             I+EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   522 IEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAY 576


>UNIPROTKB|O00571 [details] [associations]
            symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
            speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
            regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IDA] [GO:1900087
            "positive regulation of G1/S transition of mitotic cell cycle"
            evidence=IMP] [GO:0045948 "positive regulation of translational
            initiation" evidence=IMP] [GO:0031333 "negative regulation of
            protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IMP] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
            stress" evidence=IDA] [GO:0071243 "cellular response to
            arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
            regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
            [GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
            initiation factor binding" evidence=IDA] [GO:0042256 "mature
            ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
            subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0009615 "response to virus" evidence=IDA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IDA] [GO:0032728
            "positive regulation of interferon-beta production" evidence=TAS]
            [GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
            "positive regulation of chemokine (C-C motif) ligand 5 production"
            evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IDA] [GO:0030308 "negative
            regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
            evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IMP]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
            GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
            GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
            GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
            GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
            GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
            EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
            EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
            IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
            UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
            PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
            DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
            PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
            SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
            Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
            KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
            HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
            neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
            OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
            ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
            GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
            CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
            GO:GO:0032728 Uniprot:O00571
        Length = 662

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 138/415 (33%), Positives = 230/415 (55%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   166 IPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 225

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ  +      +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   226 TGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 285

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   286 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 345

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   346 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 405

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAIS 402
             G+    ++ + Q  +WVE + K+  L D+L +  K   T   +V+V ++ GAD L + + 
Sbjct:   406 GRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLT---LVFVETKKGADSLEDFL- 461

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ 
Sbjct:   462 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSD 521

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             I+EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   522 IEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAY 576


>TAIR|locus:2076436 [details] [associations]
            symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
            EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
            RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
            SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
            EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
            GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
            ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
            Uniprot:Q9M2F9
        Length = 646

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 135/412 (32%), Positives = 224/412 (54%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + I   GD VP P+ +F+   L + L  NI+   Y  PTPVQ  AIP   +G+ L+  A 
Sbjct:   132 IPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQ 191

Query:   181 TGSGKTASFLVPVISQCANIRLHHSQNQKN-----PLAMVLTPTRELCIQVEEQAKLLGK 235
             TGSGKTA+F  P+IS    ++  H +  +      PLA++L+PTREL  Q+ ++A+    
Sbjct:   192 TGSGKTAAFCFPIISGI--MKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSY 249

Query:   236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295
                 K  +  GG  + +Q+  +++GV+++V TPGRL DLL +  + L  +R   LDE D 
Sbjct:   250 QTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADR 309

Query:   296 MLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP 350
             ML  GF  Q+ +I + + +P     Q +++SAT  +E++++             G+    
Sbjct:   310 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSS 369

Query:   351 NKAVKQLAIWVESNKKKQKLFDILMSK-----QHFTPPAVVYVGSRLGADLLSNAISVTT 405
                + Q   +V  + K+  L D+L ++     Q      +V+V ++ GAD L N + +  
Sbjct:   370 TDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCIN- 428

Query:   406 GMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKE 465
             G  A +IHG++  +ER   +RSF  G  P++VAT +  RG+++  V  V+ FD+PN I +
Sbjct:   429 GFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 488

Query:   466 YVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             YVH+IGR  + G+ G A  F N+ N  + + L ++++ +   +P  L  +RY
Sbjct:   489 YVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWL--TRY 538


>TAIR|locus:2041549 [details] [associations]
            symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
            EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
            UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
            PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
            KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
            OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
            GermOnline:AT2G42520 Uniprot:Q84W89
        Length = 633

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 144/436 (33%), Positives = 231/436 (52%)

Query:    99 ESDENSGF--QSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYD 156
             +S+    F  Q  T+   D+    + I   GD VP P+ +F+   L + L  NI    Y 
Sbjct:   122 DSEPEPAFTEQDNTVINFDAYED-IPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYV 180

Query:   157 MPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKN-----P 211
              PTPVQ  AIP  L G+ L+  A TGSGKTA+F  P+IS    ++  H Q  +      P
Sbjct:   181 KPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGI--MKDQHVQRPRGSRTVYP 238

Query:   212 LAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRL 271
             LA++L+PTREL  Q+ ++AK        K  +  GG  + +Q+  +++GV+++V TPGRL
Sbjct:   239 LAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRL 298

Query:   272 IDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQ 326
              DLL +  + +  IR   LDE D ML  GF  Q+ +I   + +P     Q L++SAT  +
Sbjct:   299 NDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPR 358

Query:   327 EVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSK-----QHFT 381
             E++++             G+       + Q   +V  + K+  L D+L ++     Q   
Sbjct:   359 EIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQ 418

Query:   382 PPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGI 441
                +V+V ++ GAD L N + +  G  A SIHG++  +ER   +++F  G  P++VAT +
Sbjct:   419 ALTLVFVETKRGADSLENWLCIN-GFPATSIHGDRTQQEREVALKAFKSGRTPILVATDV 477

Query:   442 LGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDIL 501
               RG+++  V  V+ FD+PN I +YVH+IGR  + G  G A  F N+ N +L + L +++
Sbjct:   478 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELM 537

Query:   502 KSSGAGIPRELINSRY 517
             + +   +P  L  +RY
Sbjct:   538 QEANQEVPEWL--TRY 551


>UNIPROTKB|F1NIX1 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
            IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
            Uniprot:F1NIX1
        Length = 638

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 139/415 (33%), Positives = 229/415 (55%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G   P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   144 IPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 203

Query:   181 TGSGKTASFLVPVISQC-AN-----IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ  A+     +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   204 TGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 263

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   264 ARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 323

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   324 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 383

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAIS 402
             G+    ++ + Q  +WVE   K+  L D+L +  K   T   +V+V ++ GAD L + + 
Sbjct:   384 GRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLT---LVFVETKKGADALEDFL- 439

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ 
Sbjct:   440 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSD 499

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             I+EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   500 IEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAY 554


>UNIPROTKB|F1NIX2 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
            Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
        Length = 636

 Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
 Identities = 140/416 (33%), Positives = 229/416 (55%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G   P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   142 IPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 201

Query:   181 TGSGKTASFLVPVISQC-AN-----IRLHHSQN------QKNPLAMVLTPTRELCIQVEE 228
             TGSGKTA+FL+P++SQ  A+     +R   + N      ++ P+++VL PTREL +Q+ E
Sbjct:   202 TGSGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQYPISLVLAPTRELAVQIYE 261

Query:   229 QAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF 288
             +A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  
Sbjct:   262 EARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 321

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXX 343
             VLDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +            
Sbjct:   322 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 381

Query:   344 XGKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAI 401
              G+    ++ + Q  +WVE   K+  L D+L +  K   T   +V+V ++ GAD L + +
Sbjct:   382 VGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLT---LVFVETKKGADALEDFL 438

Query:   402 SVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPN 461
                 G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+
Sbjct:   439 -YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPS 497

Query:   462 SIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
              I+EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   498 DIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAY 553


>UNIPROTKB|B4DXX7 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
            UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
            IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
            UCSC:uc011nar.1 Uniprot:B4DXX7
        Length = 657

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 136/413 (32%), Positives = 227/413 (54%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G   P  I +FS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   161 IPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQ 220

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ         ++       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   221 TGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEE 280

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   281 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 340

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   341 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 400

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             G+    ++ + Q  +WVE   K+  L DIL +    +   +V+V ++ GAD L + +   
Sbjct:   401 GRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSL-TLVFVETKKGADSLEDFL-YH 458

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
              G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  VR VI FD+P+ I+
Sbjct:   459 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIE 518

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             EYVH+IGR  ++G+ G A  F NE+N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   519 EYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAY 571


>UNIPROTKB|O15523 [details] [associations]
            symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
            HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
            EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
            RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
            SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
            PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
            Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
            KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
            HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
            InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
            NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
            Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
        Length = 660

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 136/413 (32%), Positives = 227/413 (54%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G   P  I +FS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   164 IPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQ 223

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ         ++       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   224 TGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEE 283

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   284 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 343

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   344 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 403

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             G+    ++ + Q  +WVE   K+  L DIL +    +   +V+V ++ GAD L + +   
Sbjct:   404 GRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSL-TLVFVETKKGADSLEDFL-YH 461

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
              G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  VR VI FD+P+ I+
Sbjct:   462 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIE 521

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             EYVH+IGR  ++G+ G A  F NE+N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   522 EYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAY 574


>MGI|MGI:103064 [details] [associations]
            symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
            X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
            "RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
            of translation" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
            [GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
            "RNA secondary structure unwinding" evidence=ISO] [GO:0016020
            "membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0031333 "negative regulation of protein complex assembly"
            evidence=ISO] [GO:0031369 "translation initiation factor binding"
            evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
            assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
            binding" evidence=ISO] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043154 "negative
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=ISO] [GO:0045087 "innate immune response"
            evidence=ISO] [GO:0045727 "positive regulation of translation"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0045948
            "positive regulation of translational initiation" evidence=ISO]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=ISO]
            [GO:0071470 "cellular response to osmotic stress" evidence=ISO]
            [GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
            [GO:1900087 "positive regulation of G1/S transition of mitotic cell
            cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
            apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
            GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
            GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
            GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
            GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
            GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
            GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
            HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
            IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
            ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
            MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
            REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
            Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
            InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
            Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
        Length = 662

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 138/415 (33%), Positives = 230/415 (55%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   166 IPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 225

Query:   181 TGSGKTASFLVPVISQC-AN-----IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ  A+     +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   226 TGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 285

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   286 ARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 345

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   346 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 405

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAIS 402
             G+    ++ + Q  +WVE   K+  L D+L +  K   T   +V+V ++ GAD L + + 
Sbjct:   406 GRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSLT---LVFVETKKGADSLEDFL- 461

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ 
Sbjct:   462 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSD 521

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             I+EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  +
Sbjct:   522 IEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAF 576


>RGD|1564771 [details] [associations]
            symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
            PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
            Uniprot:D4ADE8
        Length = 662

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 138/415 (33%), Positives = 230/415 (55%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   166 IPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 225

Query:   181 TGSGKTASFLVPVISQC-AN-----IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ  A+     +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   226 TGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 285

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   286 ARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 345

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   346 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 405

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAIS 402
             G+    ++ + Q  +WVE   K+  L D+L +  K   T   +V+V ++ GAD L + + 
Sbjct:   406 GRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSLT---LVFVETKKGADSLEDFL- 461

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ 
Sbjct:   462 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSD 521

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             I+EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  +
Sbjct:   522 IEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAF 576


>UNIPROTKB|D3IVZ2 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
            EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
            Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
        Length = 661

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 136/413 (32%), Positives = 226/413 (54%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + + V G+  P  I SFS  ++ + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   166 IPVEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 225

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ         ++       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   226 TGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIYEE 285

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+           +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   286 ARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 345

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   346 LDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 405

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             G+    ++ + Q  +WVE   K+  L D+L +        +V+V ++ GAD L + +   
Sbjct:   406 GRVGSTSENITQKVVWVEEADKRSFLLDLL-NATGTDSLTLVFVETKKGADSLEDFL-YH 463

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
              G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P  I+
Sbjct:   464 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPGDIE 523

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   524 EYVHRIGRTGRVGNLGLATSFFNERNINISKDLLDLLVEAKQEVPSWLENMAY 576


>MGI|MGI:91842 [details] [associations]
            symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
            GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
            GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
            IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
            ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
            PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
            Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
            InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
            Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
            GermOnline:ENSMUSG00000039224 Uniprot:P16381
        Length = 660

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 135/413 (32%), Positives = 227/413 (54%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   165 IPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 224

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ         +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   225 TGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEE 284

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   285 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 344

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   345 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 404

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             G+    ++ + Q  +WVE   K+  L D+L +    +   +V+V ++ GAD L + +   
Sbjct:   405 GRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSL-ILVFVETKKGADSLEDFL-YH 462

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
              G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ I+
Sbjct:   463 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIE 522

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  +
Sbjct:   523 EYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAF 575


>RGD|1309586 [details] [associations]
            symbol:RGD1309586 "similar to probable ATP-dependent RNA
            helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
            OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
            RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
            GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
            NextBio:684798 Uniprot:D3ZN21
        Length = 659

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 135/413 (32%), Positives = 227/413 (54%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   164 IPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 223

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ         +R       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   224 TGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEE 283

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   284 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 343

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   344 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 403

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             G+    ++ + Q  +WVE   K+  L D+L +    +   +V+V ++ GAD L + +   
Sbjct:   404 GRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSL-ILVFVETKKGADSLEDFL-YH 461

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
              G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ I+
Sbjct:   462 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIE 521

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L N  +
Sbjct:   522 EYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAF 574


>ASPGD|ASPL0000077157 [details] [associations]
            symbol:AN10557 species:162425 "Emericella nidulans"
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010628 "positive regulation of gene expression" evidence=IEA]
            [GO:0097308 "cellular response to farnesol" evidence=IEP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
            PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
        Length = 668

 Score = 589 (212.4 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
 Identities = 130/405 (32%), Positives = 217/405 (53%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G  VP P+ +F++  L   L+ NI  A Y  PTPVQ  +IP  ++G+ L+  A 
Sbjct:   172 IPVEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQ 231

Query:   181 TGSGKTASFLVPVISQC----------ANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQA 230
             TGSGKT  FL P++SQ           +       Q +  P +++L PTREL  Q+ ++A
Sbjct:   232 TGSGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDEA 291

Query:   231 KLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVL 290
             +        +  +V GG  +  Q+ +I++G +L+V TPGRL+DL+ +  I L +I+  +L
Sbjct:   292 RKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLIL 351

Query:   291 DEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXXG 345
             DE D ML  GF  Q+ +I     +P     Q LM+SAT  ++++ +             G
Sbjct:   352 DEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVG 411

Query:   346 KPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPP-AVVYVGSRLGADLLSNAISVT 404
             +    ++ + Q   +VE + K+  L DIL +  H T    +++V ++  AD LS  + + 
Sbjct:   412 RVGSTSENITQKVEYVEDHDKRSVLLDILHT--HGTTGLTLIFVETKRMADALSEFL-IN 468

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
                 A +IHG++  +ER   +  F  G  P++VAT +  RG+++  V  VI +D+P  I 
Sbjct:   469 QRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIPNVTHVINYDLPTDID 528

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
             +YVH+IGR  + G+ G A  F N  N+ + ++L+D+LK +   +P
Sbjct:   529 DYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEVP 573

 Score = 39 (18.8 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query:   117 LRKRLEINVKGDAVPAP 133
             LR+R ++N  GD   AP
Sbjct:    37 LRQR-QVNANGDGASAP 52


>UNIPROTKB|I3LDV0 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
            Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
        Length = 667

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 137/418 (32%), Positives = 229/418 (54%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I SFS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   167 IPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 226

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ         ++       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   227 TGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEE 286

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   287 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 346

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   347 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 406

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAIS 402
             G+    ++ + Q  +WVE + K+  L D+L +  K   T   +V+V ++ GAD L + + 
Sbjct:   407 GRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLT---LVFVETKKGADSLEDFL- 462

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                G    SIHG++  ++R E +  F  G+ P++VAT +  RG+++  V+ VI FD+P+ 
Sbjct:   463 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSD 522

Query:   463 IKEYVHQIGRASQMGDEGT---AIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             I+EYVH+IGR  ++G+ G    A  F NE N N+ ++L+D+L  +   +P  L N  Y
Sbjct:   523 IEEYVHRIGRTGRVGNLGLIGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAY 580


>MGI|MGI:1349406 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
            CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
            RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
            SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
            PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
            InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
            GermOnline:ENSMUSG00000069045 Uniprot:Q62095
        Length = 658

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 136/415 (32%), Positives = 225/415 (54%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I +FS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   165 IPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 224

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA+FL+P++SQ         ++       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   225 TGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 284

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG    +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   285 ARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 344

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   345 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 404

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQHFTPPAVVYVGSRLGADLLSNAIS 402
             G+    ++ + Q  +WVE   K+  L D+L +  K   T   +V+V ++ GAD L N + 
Sbjct:   405 GRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLT---LVFVETKKGADSLENFL- 460

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                     SIHG++  K+R E +  F  G  P++VAT +  RG+++  V+ VI FD+P+ 
Sbjct:   461 FQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSD 520

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             I+EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L +  Y
Sbjct:   521 IEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPSWLESMAY 575


>WB|WBGene00002244 [details] [associations]
            symbol:laf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
            "masculinization of hermaphroditic germ-line" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
            EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
            ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
            KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
            ArrayExpress:D0PV95 Uniprot:D0PV95
        Length = 708

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 134/407 (32%), Positives = 232/407 (57%)

Query:   119 KRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVS 178
             + + +   GD VP PI  FS  SL + + +NI+ AGYD PTPVQ  +IP+   G+ L+  
Sbjct:   215 EEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSC 274

Query:   179 ANTGSGKTASFLVPVIS---QCANIRLHHS------QNQKNPLAMVLTPTRELCIQVEEQ 229
             A TGSGKTA+FLVP+++   Q     +H S      + ++ P A+VL+PTREL +Q+  +
Sbjct:   275 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNE 334

Query:   230 AKLLGKGLPFKTALVVGG-DAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF 288
             ++      P  +AL+ GG +    Q+++++ G  +++ TPGRLID++ +  I ++  R  
Sbjct:   335 SRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYL 394

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLPQ-----ILMYSATISQEVEKMXXXXXXXXXXXX 343
             VLDE D ML  GF  Q+ QI     +P        M+SAT  +E++ +            
Sbjct:   395 VLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFL 454

Query:   344 X-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAIS 402
               G+    ++ + Q  +WVE ++K+  L D+L +    +   +V+V ++ GA  L+  ++
Sbjct:   455 AVGRVGSTSENIMQKIVWVEEDEKRSYLMDLLDATGD-SSLTLVFVETKRGASDLAYYLN 513

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                  + ++IHG+    ER + +  F  G  P++VAT +  RG+++  V+ VI +D+P+ 
Sbjct:   514 -RQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSD 572

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
             + EYVH+IGR  ++G+ G A  F N++N+N+ +EL+D++  +   +P
Sbjct:   573 VDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVEANQELP 619


>DICTYBASE|DDB_G0293168 [details] [associations]
            symbol:ddx17 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
            activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
            [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
            RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
            PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
            KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
        Length = 785

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 141/434 (32%), Positives = 225/434 (51%)

Query:    87 RLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKL 146
             +LP  ++ FY+   D +   Q     + +  R   ++ VKG  VP PI+ F+       L
Sbjct:   340 KLPRFEKNFYLEHPDVSKFTQE----EIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYL 395

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQ 206
             ++ I  AG+  PTP+Q QA P AL G+ ++  A TGSGKT +FL+P I    N +    +
Sbjct:   396 MKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHI-NAQPVLRE 454

Query:   207 NQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVG 266
             +   P+ +VL PTREL +Q++E+    G         V GG +   QV  +++GVE+++ 
Sbjct:   455 DD-GPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIA 513

Query:   267 TPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATIS 325
             TPGRLID+L      L  +   VLDE D ML  GF  Q+ +I   I    Q LM+SAT  
Sbjct:   514 TPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWP 573

Query:   326 QEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPA 384
             +EV+ +             G   +  N  V+Q+    +  +KK+++   L S        
Sbjct:   574 KEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSVGR-DEKV 632

Query:   385 VVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGR 444
             +V+  +R G D L   +  + G K++ IHG K   ER  ++  F  G VP+++AT +  R
Sbjct:   633 IVFAETRKGVDDLQRVLQFS-GFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASR 691

Query:   445 GVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSS 504
             G+++  ++ V+ +D PN+I+ Y+H+IGR ++ G  G +   +  +N  L  EL+ +L  +
Sbjct:   692 GLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLANELIKVLTEA 751

Query:   505 GAGIPRELINSRYT 518
                IP EL N   T
Sbjct:   752 KQKIPIELSNLSVT 765


>TAIR|locus:2076351 [details] [associations]
            symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
            GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
            EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
            IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
            RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
            UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
            STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
            EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
            KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
            OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
            Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
        Length = 612

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 131/408 (32%), Positives = 214/408 (52%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G  VP P+ +F+   L   L  NI    Y  PTPVQ  AIP  L+ + L+  A 
Sbjct:   137 IPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQ 196

Query:   181 TGSGKTASFLVPVIS---QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGL 237
             TGSGKTA+F  P+IS   +  ++          P A++L+PTREL  Q+ ++AK      
Sbjct:   197 TGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQT 256

Query:   238 PFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCML 297
               K  +  GG  + +Q+  +++G +++V TPGRL DLL +  + +  IR   LDE D ML
Sbjct:   257 GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRML 316

Query:   298 QRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNK 352
               GF  Q+ +I   + +P     Q +++SAT   +++++             G+      
Sbjct:   317 DMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTD 376

Query:   353 AVKQLAIWVESNKKKQKLFDILMSKQHFTPP---AVVYVGSRLGADLLSNAISVTTGMKA 409
              + Q   +V+ + K+  L D+L +++         +V+V ++ GAD L N + +     A
Sbjct:   377 LITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNE-FPA 435

Query:   410 LSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQ 469
              SIHG++  +ER   +RSF  G  P++VAT +  RG+++  V  V+ FD+PN I +YVH+
Sbjct:   436 TSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 495

Query:   470 IGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             IGR  + G  G A  F NE N  L + L ++++ +   +P  L  +RY
Sbjct:   496 IGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWL--TRY 541


>RGD|1308685 [details] [associations]
            symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
            evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
            [GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
            GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
            RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
            GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
        Length = 819

 Score = 360 (131.8 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
 Identities = 75/193 (38%), Positives = 112/193 (58%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             R+   I  KG  +P PI S+   SL   +L+ I+  GY  PTP+Q QAIP  L  + ++ 
Sbjct:   373 REDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIG 432

Query:   178 SANTGSGKTASFLVPVISQCANI-RLHH-SQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235
              A TGSGKTA+FL+P++     + ++    ++ + P A++L PTREL  Q+EE+    GK
Sbjct:   433 VAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK 492

Query:   236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295
              L  +T  V+GG +   Q +R++ G E+++ TPGRLID+L    + L      VLDE D 
Sbjct:   493 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 552

Query:   296 MLQRGFRDQVMQI 308
             M+  GF   V +I
Sbjct:   553 MIDMGFEPDVQKI 565

 Score = 298 (110.0 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
 Identities = 62/200 (31%), Positives = 111/200 (55%)

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q +M++AT+   VE++             G    P++ V+Q    +  ++K++KL  IL 
Sbjct:   600 QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL- 658

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
              +Q F PP +++V  + G D+L+ ++    G  A ++HG K  ++R   + +   G   +
Sbjct:   659 -EQGFDPPIIIFVNQKKGCDVLAKSLE-KMGYNACTLHGGKGQEQREFALSNLKAGAKDI 716

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT + GRG+++  V  V+ +DM  +I++Y+H+IGR  + G  G AI F+ +E+  +F 
Sbjct:   717 LVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFY 776

Query:   496 ELVD-ILKSSGAGIPRELIN 514
             EL   IL+S  +  P EL N
Sbjct:   777 ELKQAILESPVSSCPPELAN 796


>UNIPROTKB|A6QLB2 [details] [associations]
            symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
            GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
            HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
            EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
            UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
            GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
            Uniprot:A6QLB2
        Length = 820

 Score = 360 (131.8 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
 Identities = 75/193 (38%), Positives = 112/193 (58%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             R+   I  KG  +P PI S+   SL   +L+ I+  GY  PTP+Q QAIP  L  + ++ 
Sbjct:   374 REDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIG 433

Query:   178 SANTGSGKTASFLVPVISQCANI-RLHH-SQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235
              A TGSGKTA+FL+P++     + ++    ++ + P A++L PTREL  Q+EE+    GK
Sbjct:   434 VAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK 493

Query:   236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295
              L  +T  V+GG +   Q +R++ G E+++ TPGRLID+L    + L      VLDE D 
Sbjct:   494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553

Query:   296 MLQRGFRDQVMQI 308
             M+  GF   V +I
Sbjct:   554 MIDMGFEPDVQKI 566

 Score = 298 (110.0 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
 Identities = 62/200 (31%), Positives = 111/200 (55%)

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q +M++AT+   VE++             G    P++ V+Q    +  ++K++KL  IL 
Sbjct:   601 QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL- 659

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
              +Q F PP +++V  + G D+L+ ++    G  A ++HG K  ++R   + +   G   +
Sbjct:   660 -EQGFDPPIIIFVNQKKGCDVLAKSLE-KMGYNACTLHGGKGQEQREFALSNLKAGAKDI 717

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT + GRG+++  V  V+ +DM  +I++Y+H+IGR  + G  G AI F+ +E+  +F 
Sbjct:   718 LVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFY 777

Query:   496 ELVD-ILKSSGAGIPRELIN 514
             EL   IL+S  +  P EL N
Sbjct:   778 ELKQAILESPVSSCPPELAN 797


>UNIPROTKB|E2RTL6 [details] [associations]
            symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
            GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
            RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
            Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
            NextBio:20853071 Uniprot:E2RTL6
        Length = 820

 Score = 360 (131.8 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
 Identities = 75/193 (38%), Positives = 112/193 (58%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             R+   I  KG  +P PI S+   SL   +L+ I+  GY  PTP+Q QAIP  L  + ++ 
Sbjct:   374 REDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIG 433

Query:   178 SANTGSGKTASFLVPVISQCANI-RLHH-SQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235
              A TGSGKTA+FL+P++     + ++    ++ + P A++L PTREL  Q+EE+    GK
Sbjct:   434 VAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK 493

Query:   236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295
              L  +T  V+GG +   Q +R++ G E+++ TPGRLID+L    + L      VLDE D 
Sbjct:   494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553

Query:   296 MLQRGFRDQVMQI 308
             M+  GF   V +I
Sbjct:   554 MIDMGFEPDVQKI 566

 Score = 298 (110.0 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
 Identities = 62/200 (31%), Positives = 111/200 (55%)

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q +M++AT+   VE++             G    P++ V+Q    +  ++K++KL  IL 
Sbjct:   601 QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL- 659

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
              +Q F PP +++V  + G D+L+ ++    G  A ++HG K  ++R   + +   G   +
Sbjct:   660 -EQGFDPPIIIFVNQKKGCDVLAKSLE-KMGYNACTLHGGKGQEQREFALSNLKAGAKDI 717

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT + GRG+++  V  V+ +DM  +I++Y+H+IGR  + G  G AI F+ +E+  +F 
Sbjct:   718 LVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFY 777

Query:   496 ELVD-ILKSSGAGIPRELIN 514
             EL   IL+S  +  P EL N
Sbjct:   778 ELKQAILESPVSSCPPELAN 797


>UNIPROTKB|Q9BUQ8 [details] [associations]
            symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
            "RNA splicing, via transesterification reactions" evidence=TAS]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
            "cis assembly of pre-catalytic spliceosome" evidence=IC]
            [GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
            "gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
            GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
            KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
            RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
            SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
            STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
            PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
            KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
            HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
            PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
            InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
            GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
            CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
            Uniprot:Q9BUQ8
        Length = 820

 Score = 360 (131.8 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
 Identities = 75/193 (38%), Positives = 112/193 (58%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             R+   I  KG  +P PI S+   SL   +L+ I+  GY  PTP+Q QAIP  L  + ++ 
Sbjct:   374 REDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIG 433

Query:   178 SANTGSGKTASFLVPVISQCANI-RLHH-SQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235
              A TGSGKTA+FL+P++     + ++    ++ + P A++L PTREL  Q+EE+    GK
Sbjct:   434 VAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK 493

Query:   236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295
              L  +T  V+GG +   Q +R++ G E+++ TPGRLID+L    + L      VLDE D 
Sbjct:   494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553

Query:   296 MLQRGFRDQVMQI 308
             M+  GF   V +I
Sbjct:   554 MIDMGFEPDVQKI 566

 Score = 298 (110.0 bits), Expect = 1.3e-58, Sum P(2) = 1.3e-58
 Identities = 62/200 (31%), Positives = 111/200 (55%)

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q +M++AT+   VE++             G    P++ V+Q    +  ++K++KL  IL 
Sbjct:   601 QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL- 659

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
              +Q F PP +++V  + G D+L+ ++    G  A ++HG K  ++R   + +   G   +
Sbjct:   660 -EQGFDPPIIIFVNQKKGCDVLAKSLE-KMGYNACTLHGGKGQEQREFALSNLKAGAKDI 717

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT + GRG+++  V  V+ +DM  +I++Y+H+IGR  + G  G AI F+ +E+  +F 
Sbjct:   718 LVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFY 777

Query:   496 ELVD-ILKSSGAGIPRELIN 514
             EL   IL+S  +  P EL N
Sbjct:   778 ELKQAILESPVSSCPPELAN 797


>CGD|CAL0004832 [details] [associations]
            symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
            ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
            KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
        Length = 672

 Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
 Identities = 136/421 (32%), Positives = 231/421 (54%)

Query:   102 ENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPV 161
             ++S FQS  I   D+    + +   GD VP PI SF++  L + L++NI+ + +  PTPV
Sbjct:   155 DDSHFQSSGIN-FDNYDD-IPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPV 212

Query:   162 QMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQC-----ANIRLHH---SQNQKNPLA 213
             Q  ++P   +G+ L+  A TGSGKT  FL PV+S+      A +   +   S ++  P  
Sbjct:   213 QKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTI 272

Query:   214 MVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLID 273
             +V+ PTREL  Q+ E++K        +  +V GG  + +Q+  + +G +L+V TPGRL D
Sbjct:   273 LVMAPTRELVSQIYEESKKFSYRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKD 332

Query:   274 LLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEV 328
             LL +  + L +IR  VLDE D ML  GF  Q+  I     +P     Q LM+SAT  +++
Sbjct:   333 LLDRGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDI 392

Query:   329 EKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYV 388
             + +             G+    ++ + Q  ++VE ++KK  + D+L + ++     +V+ 
Sbjct:   393 QMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLLSANENGL--TIVFT 450

Query:   389 GSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVEL 448
              ++  AD L++ +    G  A +IHG++   ER + + +F  G  P++VAT +  RG+++
Sbjct:   451 ETKRMADNLADYL-YDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDI 509

Query:   449 LGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGI 508
               V  VI +D+P+ I +YVH+IGR  + G+ G A  F N  NKN+ + L+++L  +   +
Sbjct:   510 PNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGLIELLSEANQEV 569

Query:   509 P 509
             P
Sbjct:   570 P 570


>RGD|2314437 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
            species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
            EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
            UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
            GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
        Length = 652

 Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 133/413 (32%), Positives = 223/413 (53%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G+  P  I +FS   + + ++ NIE   Y  PTPVQ  AIP     + L+  A 
Sbjct:   159 IPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQ 218

Query:   181 TGSGKTASFLVPVISQCAN------IRL-----HHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSG TA+FL+P++SQ         ++       + + ++ P+++VL PTREL +Q+ E+
Sbjct:   219 TGSGCTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEE 278

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             A+        +  +V GG    +Q+  +++G  L+V TPGRL+D++ +  I LD  +  V
Sbjct:   279 ARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 338

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+ +I    ++P       +M+SAT  +E++ +             
Sbjct:   339 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 398

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             G+    ++ + Q  +WVE   K+  L D+L +    +   +V+V ++ GAD L N +   
Sbjct:   399 GRVGSTSENITQKVVWVEELDKRSFLLDLLNATGRDSL-TLVFVETKKGADSLENFL-FQ 456

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
                   SIHG++  K+R E +  F  G  P++VAT +  RG+++  V+ VI FD+P+ I+
Sbjct:   457 ERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDIE 516

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             EYVH+IGR  ++G+ G A  F NE N N+ ++L+D+L  +   +P  L +  Y
Sbjct:   517 EYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPSWLESMAY 569


>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
            symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
            GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
            CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
            EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
            RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
            Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
            InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
        Length = 807

 Score = 358 (131.1 bits), Expect = 4.3e-58, Sum P(2) = 4.3e-58
 Identities = 76/197 (38%), Positives = 113/197 (57%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             R+   I  KG  +P PI ++   SL   +L+ IE  GY  PTP+Q QAIP  L  + ++ 
Sbjct:   361 REDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIG 420

Query:   178 SANTGSGKTASFLVPVISQCANI-RLHHSQNQ-KNPLAMVLTPTRELCIQVEEQAKLLGK 235
              A TGSGKTA+FL+P++     + ++   ++  + P A++L PTREL  Q+EE+    GK
Sbjct:   421 VAETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQIEEETIKFGK 480

Query:   236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295
              L  +T  V+GG +   Q +R++ G E+++ TPGRLID+L    + L      VLDE D 
Sbjct:   481 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 540

Query:   296 MLQRGFRDQVMQIFRAI 312
             M+  GF   V +I   I
Sbjct:   541 MIDMGFEPDVQKILEYI 557

 Score = 296 (109.3 bits), Expect = 4.3e-58, Sum P(2) = 4.3e-58
 Identities = 63/215 (29%), Positives = 119/215 (55%)

Query:   303 DQVMQIFRA--ISLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIW 360
             +++MQ F +      Q +M++AT+   VE++             G    P++ V+Q  I 
Sbjct:   573 EKMMQNFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVIL 632

Query:   361 VESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKE 420
             +   +K++KL ++L S   F PP +++V  + G D+L+ ++    G  A ++HG K  ++
Sbjct:   633 MSEGEKRKKLLEVLASG--FEPPIIIFVNQKKGCDVLAKSLE-KMGYNACTLHGGKGQEQ 689

Query:   421 RREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEG 480
             R   + +   G   ++VAT + GRG+++  V  V+ +DM  +I++Y+H+IGR  + G  G
Sbjct:   690 REFALSNLKAGAKDILVATDVAGRGIDIQDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSG 749

Query:   481 TAIVFVNEENKNLFQELVD-ILKSSGAGIPRELIN 514
              A+ F+ +E+ ++F +L   IL+S  +  P EL N
Sbjct:   750 VAMTFLTKEDSSVFYDLKQAILESPVSTCPPELAN 784


>SGD|S000005056 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
            protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
            "nuclear polyadenylation-dependent mRNA catabolic process"
            evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
            ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
            RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
            SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
            STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
            GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
            CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
            Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
        Length = 546

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 137/430 (31%), Positives = 226/430 (52%)

Query:    87 RLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKL 146
             +LP  ++ FYV    E+   +  +  +    RK  E+ + G  +P PI +F        +
Sbjct:    69 KLPTFEKNFYV----EHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYV 124

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQ 206
             L  ++A G+D PT +Q Q  P ALSG+ ++  A TGSGKT S+ +P I    N +   + 
Sbjct:   125 LNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHI-NAQPLLAP 183

Query:   207 NQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVG 266
                 P+ +VL PTREL +Q++ +    G     +   V GG   ++Q+  + +G E+++ 
Sbjct:   184 GD-GPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIA 242

Query:   267 TPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATIS 325
             TPGRLID+L      L  +   VLDE D ML  GF  Q+ +I   I    Q LM+SAT  
Sbjct:   243 TPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 302

Query:   326 QEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKKKQKLFDIL-MSKQHFTPP 383
             +EV+++             G   +  +  + Q+   V   +K+ +L   L  + Q     
Sbjct:   303 KEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYK 362

Query:   384 AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILG 443
              +++  ++   D ++  +    G  AL+IHG+K  +ER  +++ F  G  P++VAT +  
Sbjct:   363 TLIFASTKRMCDDITKYLR-EDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAA 421

Query:   444 RGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKS 503
             RG+++ G+  VI +DMP +I++YVH+IGR  + G  GTAI F  E+NK L  +L+ I++ 
Sbjct:   422 RGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMRE 481

Query:   504 SGAGIPRELI 513
             +   IP EL+
Sbjct:   482 ANQNIPPELL 491


>TAIR|locus:2162022 [details] [associations]
            symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
            EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
            IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
            UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
            PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
            KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
            OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
            Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
        Length = 591

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 135/422 (31%), Positives = 228/422 (54%)

Query:    95 FYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAG 154
             FYV    E+   Q++T       R   +I+V+G  VP P+  F   +    +L+ I   G
Sbjct:   129 FYV----ESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLG 184

Query:   155 YDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVP-VISQCANIRLHHSQNQKNPLA 213
             +  PTP+Q Q  P AL G+ L+  A TGSGKT ++L+P ++   A  RL   Q+   P+ 
Sbjct:   185 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRL--GQDD-GPIV 241

Query:   214 MVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLID 273
             ++L PTREL +Q++E+++  G     ++  + GG     Q+  +++GVE+++ TPGRLID
Sbjct:   242 LILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 301

Query:   274 LLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMX 332
             +L      L  +   VLDE D ML  GF  Q+ +I   I    Q L++SAT  +EVE + 
Sbjct:   302 MLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLA 361

Query:   333 XXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAV-VYVGS 390
                         G  ++  N+++ Q+   V + +K  +L  +L  KQ      + ++V +
Sbjct:   362 RQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLL--KQLMDGSKILIFVET 419

Query:   391 RLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLG 450
             + G D ++  + +  G  AL+IHG+K   ER  ++  F  G  P++ AT +  RG+++  
Sbjct:   420 KRGCDQVTRQLRMD-GWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKD 478

Query:   451 VRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPR 510
             ++ V+ +D PN++++Y+H+IGR  + G +G A  F   +N    +ELV IL+ +G  +P 
Sbjct:   479 IKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPP 538

Query:   511 EL 512
              L
Sbjct:   539 TL 540


>POMBASE|SPCC1795.11 [details] [associations]
            symbol:sum3 "translation initiation RNA helicase Sum3"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=IMP] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0031047
            "gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IGI] [GO:0071470
            "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
            OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
            EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
            ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
            MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
            EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
            NextBio:20799875 Uniprot:O13370
        Length = 636

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 134/412 (32%), Positives = 218/412 (52%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + + V G  +  P+  F+S  L+  LLQNI+ +GY  PTPVQ  +IP   SG+ L+  A 
Sbjct:   156 IPVEVSGGDIE-PVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQ 214

Query:   181 TGSGKTASFLVPVISQC-----------ANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQ 229
             TGSGKTA FL P++S              +  + +   +  P  ++L PTREL  Q+ E+
Sbjct:   215 TGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEE 274

Query:   230 AKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289
             ++        +   V GG  +  Q+ +I QG +L+  TPGRL+DL+ +  I L +I+  V
Sbjct:   275 SRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLV 334

Query:   290 LDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX 344
             LDE D ML  GF  Q+  I     +      Q LM+SAT  ++++ +             
Sbjct:   335 LDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSV 394

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPP---AVVYVGSRLGADLLSNAI 401
             G+    ++ + Q  + VE ++K+  L DIL    H  PP    +++V ++  AD L++ +
Sbjct:   395 GRVGSTSENITQKVVHVEDSEKRSYLLDIL----HTLPPEGLTLIFVETKRMADTLTDYL 450

Query:   402 SVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPN 461
              + +   A SIHG++  +ER   +  F  G   ++VAT +  RG+++  V  VI +D+P 
Sbjct:   451 -LNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPT 509

Query:   462 SIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELI 513
              I +YVH+IGR  + G+ G A+ F N  NK + +EL+++L+ +    P  LI
Sbjct:   510 DIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFLI 561


>TAIR|locus:2084178 [details] [associations]
            symbol:DRH1 "DEAD box RNA helicase 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
            PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
            SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
            EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
            EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
            PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
            RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
            ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
            PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
            EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
            KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
            OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
            Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
        Length = 619

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 128/401 (31%), Positives = 217/401 (54%)

Query:   115 DSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKS 174
             ++  +R EI V G  VP P++SF +     +LL+ + +AG+  PTP+Q Q+ P A+ G+ 
Sbjct:   138 EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRD 197

Query:   175 LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLG 234
             ++  A TGSGKT  +L+P       IR   + ++  P  +VL+PTREL  Q++E+A   G
Sbjct:   198 IVAIAKTGSGKTLGYLIPGFLHLQRIR---NDSRMGPTILVLSPTRELATQIQEEAVKFG 254

Query:   235 KGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVD 294
             +        + GG     Q+  +++G +++V TPGRL D+L    I L  I   VLDE D
Sbjct:   255 RSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEAD 314

Query:   295 CMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPN--MPN 351
              ML  GF  Q+ +I + I    Q LMY+AT  + V K+             G  +  + N
Sbjct:   315 RMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVAN 374

Query:   352 KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALS 411
             K++ Q    V   +K+++L  IL S++  +   +++  ++   D L+   ++T    A +
Sbjct:   375 KSITQHIEVVAPMEKQRRLEQILRSQEPGSK-VIIFCSTKRMCDQLTR--NLTRQFGAAA 431

Query:   412 IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIG 471
             IHG+K   ER  ++  F  G  PV+VAT +  RG+++  +R V+ +D PN +++YVH+IG
Sbjct:   432 IHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIG 491

Query:   472 RASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             R  + G  G A  F  +++     +L+ IL+ +   +P ++
Sbjct:   492 RTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532


>ASPGD|ASPL0000006660 [details] [associations]
            symbol:AN5931 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
            EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
            ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
            EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
            OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
        Length = 563

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 142/454 (31%), Positives = 231/454 (50%)

Query:    69 RVANANRGMRXXXXXXXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGD 128
             R+ N   G++       + LP  ++ FY    D  +  Q     + D  RK+ E+ V+G 
Sbjct:    79 RMGNLGSGLKKQDWDL-DTLPKFEKSFYKEHPDVTARSQR----EVDEFRKKCEMTVQGR 133

Query:   129 AVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTAS 188
              VP P+ +F      Q +L  ++A G++ PT +Q Q  P ALSG+ ++  A TGSGKT S
Sbjct:   134 DVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLS 193

Query:   189 FLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGD 248
             + +P I    N +   +     P+ ++L PTREL +Q++ +    GK    +   V GG 
Sbjct:   194 YCLPAIVHI-NAQPLLAPGD-GPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGV 251

Query:   249 AMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQI 308
                 Q+  + +GVE+ + TPGRLID+L      L  +   VLDE D ML  GF  Q+ +I
Sbjct:   252 PKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI 311

Query:   309 FRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKK 366
                I    Q  M+SAT  +EV ++             G  ++  N  + Q+   +   +K
Sbjct:   312 ISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEK 371

Query:   367 KQKLFDILMS-KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIM 425
             + ++   L    ++     +V+ G++  AD ++  +    G  ALSIHG+K  +ER  ++
Sbjct:   372 RDRMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLR-QDGWPALSIHGDKQQQERDWVL 430

Query:   426 RSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVF 485
               F  G+ P++VAT +  RG+++  +  VI +D PN+ ++YVH+IGR  + G +GTAI F
Sbjct:   431 NEFKTGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITF 490

Query:   486 VNEENKNLFQELVDILKSSGAGI-PRELINSRYT 518
                +N    ++LV IL  +   I PR     RY+
Sbjct:   491 FTTDNAKQARDLVTILSEAKQQIDPRLAEMVRYS 524


>CGD|CAL0003204 [details] [associations]
            symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
            EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
            ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
            GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
            Uniprot:Q59LU0
        Length = 562

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 140/431 (32%), Positives = 222/431 (51%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             E+LP  ++ FY     E+    + +    +  RK  E+ VKG  +P PI +F        
Sbjct:    82 EQLPKFEKNFY----SEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDY 137

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQC-ANIRLHH 204
             +LQ ++  G+  PTP+Q Q  P ALSG+ ++  A TGSGKT S+ +P I    A  +L +
Sbjct:   138 VLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQY 197

Query:   205 SQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELI 264
                   P+ +VL PTREL +Q++ +    GK    +   V GG     Q+  + +GVE+ 
Sbjct:   198 GDG---PIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEIC 254

Query:   265 VGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSAT 323
             + TPGRLID+L      L  +   VLDE D ML  GF  Q+ +I   I    Q LM+SAT
Sbjct:   255 IATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSAT 314

Query:   324 ISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKKKQKLFDILMSKQHFTP 382
               +EV+++             G   +  +  + QL   ++   K+ +L   L S  +   
Sbjct:   315 WPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKD 374

Query:   383 PAV-VYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGI 441
               + V+  ++   D ++  +  + G  AL+IHG+K   ER  ++  F  G+  ++VAT +
Sbjct:   375 NKILVFASTKRTCDEITTYLR-SDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDV 433

Query:   442 LGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDIL 501
               RG+++ G+  VI +DMP +I++YVH+IGR  + G  GTAI F  E N  L  +L  I+
Sbjct:   434 AARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIM 493

Query:   502 KSSGAGIPREL 512
             + +   +P EL
Sbjct:   494 REANQTVPPEL 504


>WB|WBGene00006888 [details] [associations]
            symbol:vbh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0032502 "developmental process"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
            germ-line" evidence=IMP] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
            evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
            GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
            GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
            ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
            MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
            EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
            GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
            WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
            ArrayExpress:Q65XX1 Uniprot:Q65XX1
        Length = 660

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 137/428 (32%), Positives = 231/428 (53%)

Query:    99 ESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMP 158
             E  E++ F     G      + + + V GD+VPA I  F+       +++N+  +GY  P
Sbjct:   103 EYSESNLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKP 162

Query:   159 TPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN-----IRLHHSQNQKN--- 210
             TPVQ  +IP+ L+ + L+  A TGSGKTA+FL+P+I          ++     N +    
Sbjct:   163 TPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYY 222

Query:   211 PLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMAR-QVYRIQQGVELIVGTPG 269
             P A+VL+PTREL IQ+ ++A         +TA++ GG    R QV R++ G  +++ TPG
Sbjct:   223 PCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPG 282

Query:   270 RLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQIL----MYSATIS 325
             RLID++ +  I L   R  VLDE D ML  GF  Q+ +I      P+      M+SAT  
Sbjct:   283 RLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFP 342

Query:   326 QEVEKMXXXXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPA 384
             +E++ +              G+    ++ ++Q  +WV   +K+  L +ILM+ +H     
Sbjct:   343 KEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMN-EHSENLV 401

Query:   385 VVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGR 444
             +V+V ++ GA+ L+  ++    ++++SIHG+    ER   +  F  G+ P++VAT +  R
Sbjct:   402 LVFVETKRGANELAYFLN-RQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAAR 460

Query:   445 GVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSS 504
             G+++  VR VI +D+P    EYVH+IGR  + G+ G A  F N++N+ + ++L +++  S
Sbjct:   461 GLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVES 520

Query:   505 GAGIPREL 512
                +P  L
Sbjct:   521 NQEVPEWL 528


>SGD|S000006040 [details] [associations]
            symbol:DBP1 "Putative ATP-dependent RNA helicase of the
            DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
            [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
            SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
            STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
            KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
            NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
            Uniprot:P24784
        Length = 617

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 131/402 (32%), Positives = 214/402 (53%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + ++  G  VP PIL FSS  L + L++NI+ A +  PTPVQ  +IP    G+ L+  A 
Sbjct:   140 IPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQ 199

Query:   181 TGSGKTASFLVPVISQCANI-------RLHHSQNQKN-PLAMVLTPTRELCIQVEEQAKL 232
             TGSGKT  FL P+ ++           +     ++K  P A+VL PTREL  Q+ E+A+ 
Sbjct:   200 TGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARK 259

Query:   233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292
                    +  +V GG  +  Q+  + +G +L+V TPGRL DLL +  + L +I+  VLDE
Sbjct:   260 FTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDE 319

Query:   293 VDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
              D ML  GF  Q+  I     +P     Q LM+SAT   +++ +             G+ 
Sbjct:   320 ADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRV 379

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
                ++ + Q  ++V+   KK  L D+L S +H     +++V ++  AD L++ + +    
Sbjct:   380 GSTSENITQRILYVDDMDKKSALLDLL-SAEH-KGLTLIFVETKRMADQLTDFL-IMQNF 436

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
             KA +IHG++   ER   + +F      ++VAT +  RG+++  V  VI +D+P+ I +YV
Sbjct:   437 KATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYV 496

Query:   468 HQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
             H+IGR  + G+ G A  F N  N+N+ + L++IL  +   +P
Sbjct:   497 HRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVP 538


>SGD|S000005730 [details] [associations]
            symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
            helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
            [GO:0033592 "RNA strand annealing activity" evidence=IDA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
            EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
            EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
            RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
            DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
            PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
            GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
            KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
            GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
        Length = 604

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 138/421 (32%), Positives = 222/421 (52%)

Query:   102 ENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPV 161
             E+  FQS  I   D+    + ++  G  VP PI  F+S  L   LL+NI+ A +  PTPV
Sbjct:   111 EDPNFQSSGIN-FDNYDD-IPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPV 168

Query:   162 QMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLH---HSQN---QKN--PLA 213
             Q  ++P   +G+ L+  A TGSGKT  FL PV+S+           SQ    Q+   P A
Sbjct:   169 QKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTA 228

Query:   214 MVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLID 273
             +++ PTREL  Q+ ++AK        K  +V GG  +  Q+  I++G +L+V TPGRL D
Sbjct:   229 VIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLND 288

Query:   274 LLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL-P----QILMYSATISQEV 328
             LL +  I L +++  VLDE D ML  GF  Q+  I     + P    Q LM+SAT   ++
Sbjct:   289 LLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADI 348

Query:   329 EKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYV 388
             + +             G+    ++ + Q  ++VE+  KK  L D+L +        +++V
Sbjct:   349 QHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGL--TLIFV 406

Query:   389 GSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVEL 448
              ++  AD L++ + +    +A +IHG++   ER   + +F  G   ++VAT +  RG+++
Sbjct:   407 ETKRMADQLTDFL-IMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDI 465

Query:   449 LGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGI 508
               V  VI +D+P+ + +YVH+IGR  + G+ G A  F N EN N+ + L +IL  +   +
Sbjct:   466 PNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEV 525

Query:   509 P 509
             P
Sbjct:   526 P 526


>TAIR|locus:2222617 [details] [associations]
            symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
            "plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
            wall modification" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
            PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
            SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
            Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
            ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
            EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
            OMA:YLIPGFM Uniprot:F4K6V1
        Length = 712

 Score = 533 (192.7 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
 Identities = 119/383 (31%), Positives = 203/383 (53%)

Query:   133 PILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVP 192
             P   F+S  +     + + +AG+  P+P+Q Q+ P A+  + ++  A TGSGKT  +L+P
Sbjct:   227 PAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP 286

Query:   193 VISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMAR 252
                    I   H+ ++  P  +VL+PTREL  Q++ +A   GK      A + GG     
Sbjct:   287 GFMHLQRI---HNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGP 343

Query:   253 QVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI 312
             Q+  I++GV+++V TPGRL D+L    I L  +   VLDE D ML  GF  Q+ +I   +
Sbjct:   344 QLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEV 403

Query:   313 SLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPN--MPNKAVKQLAIWVESNKKKQK 369
                 Q LMY+AT  +EV K+             G  +  + NK++ Q    +   +K  +
Sbjct:   404 PTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSR 463

Query:   370 LFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFL 429
             L  IL S++  +   +++  ++   D L+  ++ T G  A +IHG+K   ER +++  F 
Sbjct:   464 LEQILRSQEPGSK-IIIFCSTKRMCDQLARNLTRTFG--AAAIHGDKSQAERDDVLNQFR 520

Query:   430 VGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEE 489
              G  PV+VAT +  RG+++  +R V+ +D PN +++YVH+IGR  + G  G A  F  ++
Sbjct:   521 SGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQ 580

Query:   490 NKNLFQELVDILKSSGAGIPREL 512
             +     +L+ IL+ +   +P ++
Sbjct:   581 DAKHASDLIKILEGANQKVPPQV 603

 Score = 65 (27.9 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query:   119 KRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSAL 170
             ++ EI V G  VP P++SF +  L  +LL+  E   +    P  +  +P A+
Sbjct:   145 RKHEITVSGGQVPPPLMSFEATGLPNELLR--ECPNF---MPYALSFVPGAI 191


>FB|FBgn0032690 [details] [associations]
            symbol:CG10333 species:7227 "Drosophila melanogaster"
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
            nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
            snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
            "precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
            GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
            GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
            OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
            UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
            GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
            InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
        Length = 822

 Score = 357 (130.7 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
 Identities = 70/193 (36%), Positives = 116/193 (60%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             R+   + +KG  +P PI S++     ++++  I+  GY  PTP+Q QAIP  L  + ++ 
Sbjct:   377 REDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIG 436

Query:   178 SANTGSGKTASFLVPVISQCANI-RLHHSQN-QKNPLAMVLTPTRELCIQVEEQAKLLGK 235
              A TGSGKT +FL+P++S   ++ ++   ++  + P A+++ PTREL  Q+EE+    G+
Sbjct:   437 VAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQ 496

Query:   236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295
              L  +T +VVGG +   Q +R++ G E+++ TPGRLID+L    + L+     VLDE D 
Sbjct:   497 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADR 556

Query:   296 MLQRGFRDQVMQI 308
             M+  GF   V +I
Sbjct:   557 MIDMGFEPDVQKI 569

 Score = 282 (104.3 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
 Identities = 60/200 (30%), Positives = 106/200 (53%)

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q +M++AT+   VE++             G    P +  +Q+   +  N K++KL +IL 
Sbjct:   603 QTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILS 662

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
              K    PP +++V  + GAD+L+  +    G  + ++HG K  ++R   + +   G   +
Sbjct:   663 RK--IDPPVIIFVNQKKGADVLAKGLE-KLGYNSCTLHGGKGQEQREYALAALKSGAKDI 719

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT + GRG+++  V  VI +DM  +I++Y H+IGR  + G  G AI FV +++  LF 
Sbjct:   720 LVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFY 779

Query:   496 ELVDILKSSGAGI-PRELIN 514
             +L   + +S     P EL+N
Sbjct:   780 DLKQCVSASPVSTCPPELMN 799


>UNIPROTKB|E2RMU5 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
            "leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
            GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
            Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
        Length = 728

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 136/418 (32%), Positives = 221/418 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   255 DEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 314

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP  L+G+ L+  A TGSGKTA+FL+P+++   +  I     +  + P  +++ P
Sbjct:   315 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAP 374

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG  +   + +I QG  ++  TPGRL+D++ K 
Sbjct:   375 TRELINQIYLEARKFSFGTCVRAVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDIIGKE 434

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  ++  VLDE D ML  GF  ++ ++     +P     Q LM+SAT  +E++++  
Sbjct:   435 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 494

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    K++KL +IL S        +V+V ++ 
Sbjct:   495 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRSIGD--ERTMVFVETKK 552

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   553 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQ 611

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIP 509
              VI FD+P++I EYVH+IGR  + G+ G AI F + E+ N L Q LV +L  +   +P
Sbjct:   612 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDPESDNHLAQPLVKVLSDAQQDVP 669


>UNIPROTKB|D6RDK4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
            UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
            GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
            ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
            Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
            Bgee:D6RDK4 Uniprot:D6RDK4
        Length = 704

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 136/418 (32%), Positives = 221/418 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   234 DEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 293

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP  L+G+ L+  A TGSGKTA+FL+P+++   +  I     +  + P  +++ P
Sbjct:   294 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAP 353

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG  +   + +I QG  ++  TPGRL+D++ K 
Sbjct:   354 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 413

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  I+  VLDE D ML  GF  ++ ++     +P     Q LM+SAT  +E++++  
Sbjct:   414 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 473

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    K++KL +IL  +       +V+V ++ 
Sbjct:   474 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEIL--RNIGDERTMVFVETKK 531

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   532 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQ 590

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIP 509
              VI FD+P++I EYVH+IGR  + G+ G AI F + E+ N L Q LV +L  +   +P
Sbjct:   591 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVP 648


>UNIPROTKB|Q9NQI0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0000237
            "leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
            localization" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
            [GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
            EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
            IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
            RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
            ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
            PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
            PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
            Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
            KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
            GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
            HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
            InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
            NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
            Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
            Uniprot:Q9NQI0
        Length = 724

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 136/418 (32%), Positives = 221/418 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   254 DEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 313

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP  L+G+ L+  A TGSGKTA+FL+P+++   +  I     +  + P  +++ P
Sbjct:   314 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAP 373

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG  +   + +I QG  ++  TPGRL+D++ K 
Sbjct:   374 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 433

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  I+  VLDE D ML  GF  ++ ++     +P     Q LM+SAT  +E++++  
Sbjct:   434 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 493

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    K++KL +IL  +       +V+V ++ 
Sbjct:   494 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEIL--RNIGDERTMVFVETKK 551

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   552 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQ 610

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIP 509
              VI FD+P++I EYVH+IGR  + G+ G AI F + E+ N L Q LV +L  +   +P
Sbjct:   611 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVP 668


>UNIPROTKB|Q6GWX0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
            ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
            KEGG:ssc:431672 Uniprot:Q6GWX0
        Length = 722

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 136/418 (32%), Positives = 221/418 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   252 DEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 311

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP  L+G+ L+  A TGSGKTA+FL+P+++   +  I     +  + P  +++ P
Sbjct:   312 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAP 371

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG  +   + +I QG  ++  TPGRL+D++ K 
Sbjct:   372 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 431

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  I+  VLDE D ML  GF  ++ ++     +P     Q LM+SAT  +E++++  
Sbjct:   432 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 491

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    K++KL +IL  +       +V+V ++ 
Sbjct:   492 EFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKLLEIL--RNIGDERTMVFVETKK 549

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   550 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQ 608

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIP 509
              VI FD+P++I EYVH+IGR  + G+ G AI F + E+ N L Q LV +L  +   +P
Sbjct:   609 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVP 666


>UNIPROTKB|A4QSS5 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase DBP2"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
            ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
            KEGG:mgr:MGG_16901 Uniprot:A4QSS5
        Length = 548

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 137/455 (30%), Positives = 232/455 (50%)

Query:    69 RVANANRGMRXXXXXXXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGD 128
             R++N   G++         LP  ++ FY    D  +  Q+    + D  R+   + V+G 
Sbjct:    64 RMSNLGAGLQKQDWDI-NALPKFEKHFYKEHPDVTNRSQA----EVDKFRREHSMAVQGS 118

Query:   129 AVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTAS 188
              VP P+ +F      + ++  ++A G+  PT +Q Q  P ALSG+ ++  A TGSGKT +
Sbjct:   119 DVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLT 178

Query:   189 FLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGD 248
             + +P I    N +   +     P+ ++L PTREL +Q++ +    GK    +   V GG 
Sbjct:   179 YCLPAIVHI-NAQPLLAPGD-GPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGV 236

Query:   249 AMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQI 308
                 Q+  + +GVE+ + TPGRLID+L      L  +   VLDE D ML  GF  Q+ +I
Sbjct:   237 PKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI 296

Query:   309 FRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKK 366
                I    Q LM+SAT  +EV  M             G  ++  N  + Q+   V  ++K
Sbjct:   297 IGQIRPDRQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEK 356

Query:   367 KQKLF---DILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERRE 423
             + ++    + +M  +      +++VG++  AD ++  +    G  ALSIHG+K   ER  
Sbjct:   357 RDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLR-QDGWPALSIHGDKQQNERDW 415

Query:   424 IMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAI 483
             ++  F  G+ P++VAT +  RG+++  +  V+ +D PN+ ++Y+H+IGR  + G +GTAI
Sbjct:   416 VLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAI 475

Query:   484 VFVNEENKNLFQELVDILKSSGAGI-PRELINSRY 517
              F   EN    ++L+ +L+ +   I PR    +RY
Sbjct:   476 TFFTTENSKQARDLLGVLQEAKQEIDPRLAEMARY 510


>UNIPROTKB|Q4R5S7 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
            ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
        Length = 725

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 136/418 (32%), Positives = 223/418 (53%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G +      + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   255 DEDSIFAHYQTGISFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 314

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS--QNQKNPLAMVLTP 218
             VQ  +IP  L+G+ L+  A TGSGKTA+FL+P+++   +  +  S  +  + P  +++ P
Sbjct:   315 VQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASCFKELQEPECIIVAP 374

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG  +   + +I QG  ++  TPGRL+D++ K 
Sbjct:   375 TRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKE 434

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  I+  VLDE D ML  GF  ++ ++     +P     Q LM+SAT  +E++++  
Sbjct:   435 KIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAA 494

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    K++KL +IL  +       +V+V ++ 
Sbjct:   495 EFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEIL--RNIGDERTMVFVETKK 552

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   553 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQ 611

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIP 509
              VI FD+P++I EYVH+IGR  + G+ G AI F + E+ N L Q LV +L  +   +P
Sbjct:   612 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVP 669


>UNIPROTKB|Q3MSQ8 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
            ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
        Length = 724

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 134/421 (31%), Positives = 223/421 (52%)

Query:   100 SDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPT 159
             ++E+  F+    G        + + V G  VP  IL+F   +L   L +N+  +GY   T
Sbjct:   251 AEESDIFKHYQTGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLT 310

Query:   160 PVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS--QNQKNPLAMVLT 217
             P+Q  +IP  ++G+ L+  A TGSGKTA+FL+P+++      +  S  Q  K P A+++ 
Sbjct:   311 PIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLMVKGVESSAFQTLKEPEAIIVA 370

Query:   218 PTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMK 277
             PTREL  Q+   A+    G   +  ++ GG  M   + +I +G  ++  TPGRL+D++ K
Sbjct:   371 PTRELINQIYLDARKFSYGTCVRPVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRK 430

Query:   278 HDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMX 332
               I L  +R  VLDE D ML  GFR+ +  + ++  +P     Q LM+SAT    ++ + 
Sbjct:   431 EKIGLTKLRYLVLDEADRMLDMGFREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLA 490

Query:   333 XXXXX-XXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSR 391
                          G+       V+Q+ I V+   KK KL +IL  ++  +   +V+V ++
Sbjct:   491 REILKPDYLFVVVGQVGGACSDVEQMVIEVDEFGKKDKLMEIL--QEIGSERTMVFVKTK 548

Query:   392 LGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGV 451
               AD ++  +     + + SIHG++  KER   +R F  G+ PVIVAT +  RG+++  V
Sbjct:   549 KKADFIATFLCQEK-VPSTSIHGDREQKERETALRDFRTGQCPVIVATSVAARGLDIENV 607

Query:   452 RQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVN---EENKNLFQELVDILKSSGAGI 508
               VI FD+P+ I EYVH+IGR  + G+ G AI F +   ++ + + + LV +L  +   +
Sbjct:   608 SYVINFDIPDDIDEYVHRIGRTGRCGNTGRAISFFDKRGDDEQRIARSLVKVLSDAHQEV 667

Query:   509 P 509
             P
Sbjct:   668 P 668


>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
            symbol:PF14_0437 "helicase, truncated,
            putative" species:5833 "Plasmodium falciparum" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
            MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
            GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 132/423 (31%), Positives = 224/423 (52%)

Query:   102 ENSGFQSLTIGQTDSLRKRLEINV-KGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             E+     L+  +   +R + +I + +G+ VP P++S +       ++++++      PTP
Sbjct:    79 EHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTP 138

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPV-ISQCANIRLHHSQNQKNPLAMVLTPT 219
             +Q+Q  P ALSGK ++  A TGSGKT +F++P  +   A   L +      P+ +VL PT
Sbjct:   139 IQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDG---PIVLVLAPT 195

Query:   220 RELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
             REL  Q+ ++          +     GG   + Q+Y ++QGV +++  PGRLIDLL ++ 
Sbjct:   196 RELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNV 255

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXX 338
               L  +   VLDE D ML  GF  Q+ +I   I    Q LM+SAT  +EV+ +       
Sbjct:   256 TNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKE 315

Query:   339 X-XXXXXGKPNMPN-KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADL 396
                    G   +   +++KQ    +E ++K   L  +L          +V+V ++  AD 
Sbjct:   316 QPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVETKKNADF 375

Query:   397 LSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVII 456
             ++ A+ +  GM AL IHG+K  +ERR ++  F  G+ P+++AT +  RG+++  V+ VI 
Sbjct:   376 ITKALRLD-GMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVIN 434

Query:   457 FDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSR 516
             FD PN I++YVH+IGR  + G  G +  F+  +   L ++LV IL+ S   +P +L    
Sbjct:   435 FDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLAKDLVKILRESEQPVPPQLEKIS 494

Query:   517 YTV 519
             Y++
Sbjct:   495 YSM 497


>UNIPROTKB|Q8IL13 [details] [associations]
            symbol:PF14_0437 "Helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
            ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
            PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
            KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 132/423 (31%), Positives = 224/423 (52%)

Query:   102 ENSGFQSLTIGQTDSLRKRLEINV-KGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             E+     L+  +   +R + +I + +G+ VP P++S +       ++++++      PTP
Sbjct:    79 EHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTP 138

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPV-ISQCANIRLHHSQNQKNPLAMVLTPT 219
             +Q+Q  P ALSGK ++  A TGSGKT +F++P  +   A   L +      P+ +VL PT
Sbjct:   139 IQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDG---PIVLVLAPT 195

Query:   220 RELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
             REL  Q+ ++          +     GG   + Q+Y ++QGV +++  PGRLIDLL ++ 
Sbjct:   196 RELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNV 255

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXX 338
               L  +   VLDE D ML  GF  Q+ +I   I    Q LM+SAT  +EV+ +       
Sbjct:   256 TNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKE 315

Query:   339 X-XXXXXGKPNMPN-KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADL 396
                    G   +   +++KQ    +E ++K   L  +L          +V+V ++  AD 
Sbjct:   316 QPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVETKKNADF 375

Query:   397 LSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVII 456
             ++ A+ +  GM AL IHG+K  +ERR ++  F  G+ P+++AT +  RG+++  V+ VI 
Sbjct:   376 ITKALRLD-GMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVIN 434

Query:   457 FDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSR 516
             FD PN I++YVH+IGR  + G  G +  F+  +   L ++LV IL+ S   +P +L    
Sbjct:   435 FDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLAKDLVKILRESEQPVPPQLEKIS 494

Query:   517 YTV 519
             Y++
Sbjct:   495 YSM 497


>TIGR_CMR|SO_3783 [details] [associations]
            symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
            KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
            Uniprot:Q8EAV8
        Length = 535

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 127/364 (34%), Positives = 204/364 (56%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SFS+  LS  L + +   GYD P+P+Q QAIP+ L+GK ++ +A TG+GKTA F +P++
Sbjct:     1 MSFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
                A     H        A+VLTPTREL  QV E  +  GK LP ++A+V GG  +  Q+
Sbjct:    61 ELLAK---GHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQI 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
              +++ GV+++V TPGRL+DL+ ++ ++ + + + VLDE D ML  GF   + +I   +  
Sbjct:   118 NKLRHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPA 177

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q LM+SAT S E+ ++                N     VKQ    V+  +K   L  +
Sbjct:   178 KRQNLMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQKSALLIQL 237

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             +  KQ      +V+  ++ GA+ L+ ++ +   + A +IHG K    R + +  F  GEV
Sbjct:   238 I--KQENWQQVLVFSRTKHGANRLAKSL-IQAEISAAAIHGNKSQGARTKALADFKSGEV 294

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V+VAT I  RG+++  + QV+ FD+PN  ++YVH+IGR  + G  G A+  V+ E   L
Sbjct:   295 RVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKL 354

Query:   494 FQEL 497
              +++
Sbjct:   355 LKDI 358


>MGI|MGI:102670 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0032880 "regulation of protein localization" evidence=IMP]
            [GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
            part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
            "piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
            GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
            EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
            UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
            PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
            REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
            Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
            UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
            CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
            Uniprot:Q61496
        Length = 702

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 134/418 (32%), Positives = 219/418 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   227 DEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 286

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP  L+G+ L+  A TGSGKTA+FL+P+++      I     +  + P  +++ P
Sbjct:   287 VQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAP 346

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG      V +I QG  ++  TPGRL+D++ K 
Sbjct:   347 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKE 406

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  ++  VLDE D ML  GF  ++ ++     +P     Q L++SAT  +E++++  
Sbjct:   407 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 466

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    K++KL +IL  +       +V+V ++ 
Sbjct:   467 DFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEIL--RNIGDERTMVFVETKK 524

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   525 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQ 583

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIP 509
              VI FD+P++I EYVH+IGR  + G+ G AI F + ++ N L Q LV +L  +   +P
Sbjct:   584 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQPLVKVLSDAQQDVP 641


>UNIPROTKB|D4ADV9 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
            Uniprot:D4ADV9
        Length = 674

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 134/418 (32%), Positives = 219/418 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   228 DEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 287

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP  L+G+ L+  A TGSGKTA+FL+P+++      I     +  + P  +++ P
Sbjct:   288 VQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAP 347

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG      + +I QG  ++  TPGRL+D++ K 
Sbjct:   348 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKE 407

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  ++  VLDE D ML  GF  ++ ++     +P     Q L++SAT  +E++++  
Sbjct:   408 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 467

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    K++KL +IL  +       +V+V ++ 
Sbjct:   468 EFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEIL--RNIGDERTMVFVETKK 525

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   526 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQ 584

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIP 509
              VI FD+P++I EYVH+IGR  + G+ G AI F + E+ N L Q LV +L  +   +P
Sbjct:   585 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVP 642


>FB|FBgn0035720 [details] [associations]
            symbol:CG10077 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005875 "microtubule associated complex"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
            EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
            GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
            ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
            RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
            STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
            UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
        Length = 818

 Score = 571 (206.1 bits), Expect = 3.0e-55, P = 3.0e-55
 Identities = 132/410 (32%), Positives = 218/410 (53%)

Query:   110 TIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSA 169
             T+G+T++     EI +KGD VP P + F        ++  I   G+  PT +Q Q  P A
Sbjct:   132 TVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIA 191

Query:   170 LSGKSLLVSANTGSGKTASFLVPVISQCANI-RLHHSQNQKNPLAMVLTPTRELCIQVEE 228
             +SG+ L+  A TGSGKT ++++P +    N  RL        P+A+VL PTREL  Q+++
Sbjct:   192 MSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDG---PIALVLAPTRELAQQIQQ 248

Query:   229 QAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF 288
              A   G     +   + GG    +Q   +++GVE+++ TPGRLID L +    L      
Sbjct:   249 VAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYL 308

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D ML  GF  Q+ +I + I    Q+LM+SAT  +EV ++             G  
Sbjct:   309 VLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSL 368

Query:   348 NMP-NKAVKQLAIWVESNKKKQKLFDIL--MSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             ++  N  + Q+    + N+K  KL  +L  +S ++ T   +++V ++   D ++  IS  
Sbjct:   369 SLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETK-TIIFVETKKRVDEITRNIS-R 426

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
              G +A +IHG+K  +ER  ++ SF  G   ++VAT +  RG+++  V+ VI +D P++ +
Sbjct:   427 QGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSE 486

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELIN 514
             +YVH+IGR  +  + GTA       N N   +L+ +L+ +   I  +L+N
Sbjct:   487 DYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMN 536


>UNIPROTKB|F1MX40 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
            EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
            Uniprot:F1MX40
        Length = 1032

 Score = 577 (208.2 bits), Expect = 4.0e-55, P = 4.0e-55
 Identities = 134/423 (31%), Positives = 227/423 (53%)

Query:    95 FYVRESDENSGFQSLTIGQTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAA 153
             FYV E  E      +++ + +  R  +E I VKG   P PI S+  C +S K+L +++  
Sbjct:   335 FYV-EVPE---LAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKH 390

Query:   154 GYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLA 213
             GY+ PTP+Q QAIP+ +SG+ L+  A TGSGKT +FL+P+     + R    +  + P+A
Sbjct:   391 GYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR--SLEEGEGPIA 448

Query:   214 MVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLID 273
             +++TPTREL +Q+ ++ K   K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID
Sbjct:   449 VIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 508

Query:   274 LLMKHDIELDDIRMF---VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVE 329
             +L  +   + ++R     VLDE D M   GF  QVM+I   +    Q +M+SAT  + +E
Sbjct:   509 MLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAME 568

Query:   330 KMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVG 389
              +             G  ++    V+Q  I +E  KK  KL ++L   Q  +   +++V 
Sbjct:   569 ALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE-SGSVIIFVD 627

Query:   390 SRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELL 449
              +  AD L   + +      +S+HG     +R  I+  F  G   ++VAT +  RG+++ 
Sbjct:   628 KQEHADGLLKDL-MRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVK 686

Query:   450 GVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
              +  V+ +  PN  ++YVH+ GR  + G++G A  F+ E+      +++  L+ SG  +P
Sbjct:   687 HLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVP 746

Query:   510 REL 512
              +L
Sbjct:   747 PDL 749


>RGD|1308793 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
            evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
            [GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO] [GO:0032880 "regulation of protein localization"
            evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
            [GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
            evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
            RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
            SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
            NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
        Length = 713

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 135/418 (32%), Positives = 220/418 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   239 DEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 298

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP  L+G+ L+  A TGSGKTA+FL+P+++      I     +  + P  +++ P
Sbjct:   299 VQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAP 358

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG      + +I QG  ++  TPGRL+D++ K 
Sbjct:   359 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKE 418

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  ++  VLDE D ML  GF  ++ ++     +P     Q L++SAT  +E++++  
Sbjct:   419 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 478

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    KK+KL +IL +     P  +V+V ++ 
Sbjct:   479 EFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILRNIGDERP--MVFVETKK 536

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   537 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQ 595

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIP 509
              VI F++P++I EYVH+IGR  + G+ G AI F + E+ N L Q LV +L  +   +P
Sbjct:   596 HVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVP 653


>UNIPROTKB|Q64060 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
            RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
            SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
            NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
        Length = 713

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 135/418 (32%), Positives = 220/418 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   239 DEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 298

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP  L+G+ L+  A TGSGKTA+FL+P+++      I     +  + P  +++ P
Sbjct:   299 VQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAP 358

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG      + +I QG  ++  TPGRL+D++ K 
Sbjct:   359 TRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKE 418

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  ++  VLDE D ML  GF  ++ ++     +P     Q L++SAT  +E++++  
Sbjct:   419 KIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAG 478

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    KK+KL +IL +     P  +V+V ++ 
Sbjct:   479 EFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILRNIGDERP--MVFVETKK 536

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   537 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQ 595

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIP 509
              VI F++P++I EYVH+IGR  + G+ G AI F + E+ N L Q LV +L  +   +P
Sbjct:   596 HVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVP 653


>UNIPROTKB|E1C2R8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0072358 "cardiovascular system
            development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
            Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
        Length = 496

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 142/442 (32%), Positives = 234/442 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKG-DAVPAPILSFSSCSLSQKL 146
             LP  ++ FYV    E+     LT  + + LR++ EI ++G +  P P+ +F  CS  Q +
Sbjct:    46 LPKFEKNFYV----EHPEVARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYV 101

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS- 205
             +  +    +  PTP+Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H  
Sbjct:   102 MDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQP 156

Query:   206 --QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
               +    P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE+
Sbjct:   157 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI 216

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSA 322
              + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SA
Sbjct:   217 CIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 276

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLA-IWVESNKKK---QKLFDILMSK 377
             T  +EV ++             G   +  N  + Q+  + +ES K     Q + +I+  K
Sbjct:   277 TWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 336

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             ++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P+++
Sbjct:   337 ENKT---IIFVETKRRCDDLTRRMR-RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 392

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    +EL
Sbjct:   393 ATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 452

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +L++ R
Sbjct:   453 IKVLEEANQAINPKLMQLVDHR 474


>UNIPROTKB|Q7L014 [details] [associations]
            symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
            IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
            ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
            MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
            PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
            Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
            KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
            HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
            PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
            NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
            CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
            Uniprot:Q7L014
        Length = 1031

 Score = 573 (206.8 bits), Expect = 1.1e-54, P = 1.1e-54
 Identities = 129/405 (31%), Positives = 219/405 (54%)

Query:   113 QTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALS 171
             + +  R  +E I VKG   P PI S+  C +S K+L +++  GY+ PTP+Q QAIP+ +S
Sbjct:   349 EVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMS 408

Query:   172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAK 231
             G+ L+  A TGSGKT +FL+P+     + R    +  + P+A+++TPTREL +Q+ ++ K
Sbjct:   409 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQR--SLEEGEGPIAVIMTPTRELALQITKECK 466

Query:   232 LLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF--- 288
                K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID+L  +   + ++R     
Sbjct:   467 KFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYV 526

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D M   GF  QVM+I   +    Q +M+SAT  + +E +             G  
Sbjct:   527 VLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
             ++    V+Q  I +E  KK  KL ++L   Q  +   +++V  +  AD L   + +    
Sbjct:   587 SVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE-SGSVIIFVDKQEHADGLLKDL-MRASY 644

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
               +S+HG     +R  I+  F  G   ++VAT +  RG+++  +  V+ +  PN  ++YV
Sbjct:   645 PCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYV 704

Query:   468 HQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             H+ GR  + G++G A  F+ E+      +++  L+ SG  +P +L
Sbjct:   705 HRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDL 749


>UNIPROTKB|F1PK90 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
            Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
        Length = 1032

 Score = 573 (206.8 bits), Expect = 1.1e-54, P = 1.1e-54
 Identities = 129/405 (31%), Positives = 219/405 (54%)

Query:   113 QTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALS 171
             + +  R  +E I VKG   P PI S+  C +S K+L +++  GY+ PTP+Q QAIP+ +S
Sbjct:   349 EVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMS 408

Query:   172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAK 231
             G+ L+  A TGSGKT +FL+P+     + R    +  + P+A+++TPTREL +Q+ ++ K
Sbjct:   409 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQR--SLEEGEGPIAVIMTPTRELALQITKECK 466

Query:   232 LLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF--- 288
                K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID+L  +   + ++R     
Sbjct:   467 KFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYV 526

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D M   GF  QVM+I   +    Q +M+SAT  + +E +             G  
Sbjct:   527 VLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
             ++    V+Q  I +E  KK  KL ++L   Q  +   +++V  +  AD L   + +    
Sbjct:   587 SVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE-SGSVIIFVDKQEHADGLLKDL-MRASY 644

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
               +S+HG     +R  I+  F  G   ++VAT +  RG+++  +  V+ +  PN  ++YV
Sbjct:   645 PCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYV 704

Query:   468 HQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             H+ GR  + G++G A  F+ E+      +++  L+ SG  +P +L
Sbjct:   705 HRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDL 749


>UNIPROTKB|I3LR20 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
            Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
        Length = 1032

 Score = 573 (206.8 bits), Expect = 1.1e-54, P = 1.1e-54
 Identities = 129/405 (31%), Positives = 219/405 (54%)

Query:   113 QTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALS 171
             + +  R  +E I VKG   P PI S+  C +S K+L +++  GY+ PTP+Q QAIP+ +S
Sbjct:   349 EVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMS 408

Query:   172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAK 231
             G+ L+  A TGSGKT +FL+P+     + R    +  + P+A+++TPTREL +Q+ ++ K
Sbjct:   409 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQR--SLEEGEGPIAVIMTPTRELALQITKECK 466

Query:   232 LLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF--- 288
                K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID+L  +   + ++R     
Sbjct:   467 KFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYV 526

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D M   GF  QVM+I   +    Q +M+SAT  + +E +             G  
Sbjct:   527 VLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
             ++    V+Q  I +E  KK  KL ++L   Q  +   +++V  +  AD L   + +    
Sbjct:   587 SVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE-SGSVIIFVDKQEHADGLLKDL-MRASY 644

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
               +S+HG     +R  I+  F  G   ++VAT +  RG+++  +  V+ +  PN  ++YV
Sbjct:   645 PCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYV 704

Query:   468 HQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             H+ GR  + G++G A  F+ E+      +++  L+ SG  +P +L
Sbjct:   705 HRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDL 749


>MGI|MGI:1920895 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
            EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
            UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
            STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
            Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
            UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
            Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
            GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
        Length = 1032

 Score = 573 (206.8 bits), Expect = 1.1e-54, P = 1.1e-54
 Identities = 129/405 (31%), Positives = 219/405 (54%)

Query:   113 QTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALS 171
             + +  R  +E I VKG   P PI S+  C +S K+L +++  GY+ PTP+Q QAIP+ +S
Sbjct:   349 EVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMS 408

Query:   172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAK 231
             G+ L+  A TGSGKT +FL+P+     + R    +  + P+A+++TPTREL +Q+ ++ K
Sbjct:   409 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQR--SLEEGEGPIAVIMTPTRELALQITKECK 466

Query:   232 LLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF--- 288
                K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID+L  +   + ++R     
Sbjct:   467 KFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYV 526

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D M   GF  QVM+I   +    Q +M+SAT  + +E +             G  
Sbjct:   527 VLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
             ++    V+Q  I +E  KK  KL ++L   Q  +   +++V  +  AD L   + +    
Sbjct:   587 SVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE-SGSVIIFVDKQEHADGLLKDL-MRASY 644

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
               +S+HG     +R  I+  F  G   ++VAT +  RG+++  +  V+ +  PN  ++YV
Sbjct:   645 PCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYV 704

Query:   468 HQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             H+ GR  + G++G A  F+ E+      +++  L+ SG  +P +L
Sbjct:   705 HRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDL 749


>RGD|708480 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
            HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
            EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
            RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
            STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
            Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
            UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 573 (206.8 bits), Expect = 1.1e-54, P = 1.1e-54
 Identities = 129/405 (31%), Positives = 219/405 (54%)

Query:   113 QTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALS 171
             + +  R  +E I VKG   P PI S+  C +S K+L +++  GY+ PTP+Q QAIP+ +S
Sbjct:   349 EVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMS 408

Query:   172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAK 231
             G+ L+  A TGSGKT +FL+P+     + R    +  + P+A+++TPTREL +Q+ ++ K
Sbjct:   409 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQR--SLEEGEGPIAVIMTPTRELALQITKECK 466

Query:   232 LLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF--- 288
                K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID+L  +   + ++R     
Sbjct:   467 KFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYV 526

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D M   GF  QVM+I   +    Q +M+SAT  + +E +             G  
Sbjct:   527 VLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
             ++    V+Q  I +E  KK  KL ++L   Q  +   +++V  +  AD L   + +    
Sbjct:   587 SVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE-SGSVIIFVDKQEHADGLLKDL-MRASY 644

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
               +S+HG     +R  I+  F  G   ++VAT +  RG+++  +  V+ +  PN  ++YV
Sbjct:   645 PCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYV 704

Query:   468 HQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             H+ GR  + G++G A  F+ E+      +++  L+ SG  +P +L
Sbjct:   705 HRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDL 749


>UNIPROTKB|Q62780 [details] [associations]
            symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
            species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
            PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
            ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
            PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
            KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 573 (206.8 bits), Expect = 1.1e-54, P = 1.1e-54
 Identities = 129/405 (31%), Positives = 219/405 (54%)

Query:   113 QTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALS 171
             + +  R  +E I VKG   P PI S+  C +S K+L +++  GY+ PTP+Q QAIP+ +S
Sbjct:   349 EVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMS 408

Query:   172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAK 231
             G+ L+  A TGSGKT +FL+P+     + R    +  + P+A+++TPTREL +Q+ ++ K
Sbjct:   409 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQR--SLEEGEGPIAVIMTPTRELALQITKECK 466

Query:   232 LLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF--- 288
                K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID+L  +   + ++R     
Sbjct:   467 KFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYV 526

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D M   GF  QVM+I   +    Q +M+SAT  + +E +             G  
Sbjct:   527 VLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
             ++    V+Q  I +E  KK  KL ++L   Q  +   +++V  +  AD L   + +    
Sbjct:   587 SVVCSDVEQQVIVIEEEKKFLKLLELLGHYQE-SGSVIIFVDKQEHADGLLKDL-MRASY 644

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
               +S+HG     +R  I+  F  G   ++VAT +  RG+++  +  V+ +  PN  ++YV
Sbjct:   645 PCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYV 704

Query:   468 HQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             H+ GR  + G++G A  F+ E+      +++  L+ SG  +P +L
Sbjct:   705 HRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDL 749


>TAIR|locus:2081061 [details] [associations]
            symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
            "vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
            evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
            PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
            SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
            UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
            PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
            KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
            HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
            ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
            Uniprot:Q9SQV1
        Length = 1088

 Score = 572 (206.4 bits), Expect = 1.7e-54, P = 1.7e-54
 Identities = 128/401 (31%), Positives = 218/401 (54%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             RK+ E+   G+ +PAP ++F S  L  ++L+ + +AG+  PTP+Q Q  P AL  + ++ 
Sbjct:   418 RKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVA 477

Query:   178 SANTGSGKTASFLVPVISQCANIRLHHSQNQ-KN-PLAMVLTPTRELCIQVEEQAKLLGK 235
              A TGSGKT  +L+P     A I L H +N  +N P  ++L PTREL  Q++++A   G+
Sbjct:   478 IAKTGSGKTLGYLIP-----AFILLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGR 532

Query:   236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295
                     + GG     Q+  +++G +++V TPGRL D+L    I+   + + VLDE D 
Sbjct:   533 SSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADR 592

Query:   296 MLQRGFRDQVMQIFRAISLP--QILMYSATISQEVEKMXXXXXXXXXXXXXGKPN--MPN 351
             ML  GF  Q+ +I   I  P  Q LMY+AT  +EV K+             G+ +    N
Sbjct:   593 MLDMGFEPQIRKIVNEIP-PRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAAN 651

Query:   352 KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALS 411
             KA+ Q    V   +K+++L  IL S++  +   +++  ++   D L+ ++    G  A+ 
Sbjct:   652 KAITQYVEVVPQMEKERRLEQILRSQERGSK-VIIFCSTKRLCDHLARSVGRHFG--AVV 708

Query:   412 IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIG 471
             IHG+K   ER  ++  F  G+  V++AT +  RG+++  +R VI +D P  +++YVH+IG
Sbjct:   709 IHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIG 768

Query:   472 RASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             R  + G  G A  F  E++     +L+ +L+ +   +P ++
Sbjct:   769 RTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQV 809


>UNIPROTKB|Q90ZF6 [details] [associations]
            symbol:olvas "VASA" species:8090 "Oryzias latipes"
            [GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
            RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
            SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
        Length = 617

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 139/459 (30%), Positives = 234/459 (50%)

Query:    71 ANANRGMRXXXXXXXERLPATDECFYVRES---DENSGFQSLTIGQTDSLRKRLEINVKG 127
             A   RG         ER   T    Y+  S   DE+S F    +G        + ++V G
Sbjct:   118 AGDGRGAENSDAADPERPKVT----YIPPSLPEDEDSIFSHYKMGINFDKYDDILVDVSG 173

Query:   128 DAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTA 187
               +PA I++F    L + L  NI  +GY  PTPVQ   +P   +G+ L+  A TGSGKTA
Sbjct:   174 TNLPAAIMTFEEAKLCESLENNISRSGYVKPTPVQKYGLPIISAGRDLMACAQTGSGKTA 233

Query:   188 SFLVPVISQCA--NIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVV 245
             +FL+P++ Q     +        + P A+++ PTREL  Q+ ++A+    G   +  +V 
Sbjct:   234 AFLLPILQQLMADGVAASRFSEIQEPEAVIVAPTRELINQIYQEARKFSFGTCVRPVVVY 293

Query:   246 GGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQV 305
             GG     Q+  I++G  ++ GTPGRL+D++ +  + L  +R  VLDE D ML  GF   +
Sbjct:   294 GGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRGKVGLSKVRHLVLDEADRMLDMGFEPDM 353

Query:   306 MQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX-GKPNMPNKAVKQLAI 359
              ++  +  +P     Q LM+SAT  ++++++              G        V+Q  +
Sbjct:   354 RRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGACTDVEQTFL 413

Query:   360 WVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMK 419
              V    K+++L D+L +    +   +V+V ++  AD ++ A      +   SIHG++  +
Sbjct:   414 QVTKFNKREQLLDLLRTIG--SERTMVFVETKRQADFIA-AFLCQEKVPTTSIHGDREQR 470

Query:   420 ERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDE 479
             ER + +  F  G+ PV+VAT +  RG+++  V+ V+ FD+PN+I +YVH+IGR  + G+ 
Sbjct:   471 EREKALADFRSGKCPVLVATSVASRGLDIPDVQHVVNFDLPNTIDDYVHRIGRTGRCGNT 530

Query:   480 GTAIVFVNEE-NKNLFQELVDILKSSGAGIPRELINSRY 517
             G A+ F + + +  L + LV IL  +   +P  L  S +
Sbjct:   531 GRAVSFYDPDVDSQLARSLVGILAKAQQEVPSWLEESAF 569


>POMBASE|SPBP8B7.16c [details] [associations]
            symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
            EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
            ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
            EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
            NextBio:20802492 Uniprot:P24782
        Length = 550

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 131/421 (31%), Positives = 222/421 (52%)

Query:   102 ENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPV 161
             E+   ++ +  +    RK  EI V G  VP P+ +F        +L+ ++  G++ PTP+
Sbjct:    89 EHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPI 148

Query:   162 QMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRE 221
             Q QA P A+SG+ ++  + TGSGKT S+ +P I    N +   S     P+ +VL PTRE
Sbjct:   149 QQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHI-NAQPLLSPGD-GPIVLVLAPTRE 206

Query:   222 LCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIE 281
             L +Q++++    GK    +   V GG     Q+  + +GVE+ + TPGRL+D+L  +   
Sbjct:   207 LAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTN 266

Query:   282 LDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXX 340
             L  +   VLDE D ML  GF  Q+ +I   I    Q +M+SAT  +EV+++         
Sbjct:   267 LRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYI 326

Query:   341 XXXXGKPNMP-NKAVKQLAIWVESNKKKQKLF-DILMSKQHFTPPAVVYVGSRLGADLLS 398
                 G  ++  +  +KQ+   V++  K+ +L  DI    +      +++ G++  AD ++
Sbjct:   327 QVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDIT 386

Query:   399 NAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD 458
               +    G  AL+IHG+K   ER  ++  F  G+ P++VAT +  RG+++ G+  V  +D
Sbjct:   387 RFLR-QDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYD 445

Query:   459 MPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELIN-SRY 517
              P + ++YVH+IGR  + G +GTA  +   +N    +ELV IL  +   I  +L   +RY
Sbjct:   446 FPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQARELVSILSEAKQDIDPKLEEMARY 505

Query:   518 T 518
             +
Sbjct:   506 S 506


>UNIPROTKB|A7E307 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
            GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
            IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
            Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
            InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
        Length = 650

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 143/442 (32%), Positives = 233/442 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKG-DAVPAPILSFSSCSLSQKL 146
             LP  ++ FYV    E+     LT  + D LR++ EI V+G D  P P+ +F   +  Q +
Sbjct:    48 LPKFEKNFYV----EHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYV 103

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS- 205
             +  +    +  PTP+Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H  
Sbjct:   104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQP 158

Query:   206 --QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
               +    P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE+
Sbjct:   159 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI 218

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSA 322
              + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SA
Sbjct:   219 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 278

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLA-IWVESNKKK---QKLFDILMSK 377
             T  +EV ++             G   +  N  + Q+  + +ES K     Q + +I+  K
Sbjct:   279 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 338

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             ++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P+++
Sbjct:   339 ENKT---IIFVETKRRCDDLTRRMR-RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 394

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    +EL
Sbjct:   395 ATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 454

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +L++ R
Sbjct:   455 IKVLEEANQAINPKLMQLVDHR 476


>UNIPROTKB|E2RJ60 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
            Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
        Length = 650

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 143/442 (32%), Positives = 233/442 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKG-DAVPAPILSFSSCSLSQKL 146
             LP  ++ FYV    E+     LT  + D LR++ EI V+G D  P P+ +F   +  Q +
Sbjct:    48 LPKFEKNFYV----EHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYV 103

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS- 205
             +  +    +  PTP+Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H  
Sbjct:   104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQP 158

Query:   206 --QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
               +    P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE+
Sbjct:   159 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI 218

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSA 322
              + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SA
Sbjct:   219 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 278

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLA-IWVESNKKK---QKLFDILMSK 377
             T  +EV ++             G   +  N  + Q+  + +ES K     Q + +I+  K
Sbjct:   279 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 338

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             ++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P+++
Sbjct:   339 ENKT---IIFVETKRRCDDLTRRMR-RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 394

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    +EL
Sbjct:   395 ATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 454

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +L++ R
Sbjct:   455 IKVLEEANQAINPKLMQLVDHR 476


>UNIPROTKB|F1PID8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
            Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
        Length = 736

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 143/442 (32%), Positives = 233/442 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKG-DAVPAPILSFSSCSLSQKL 146
             LP  ++ FYV    E+     LT  + D LR++ EI V+G D  P P+ +F   +  Q +
Sbjct:   129 LPKFEKNFYV----EHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYV 184

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS- 205
             +  +    +  PTP+Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H  
Sbjct:   185 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQP 239

Query:   206 --QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
               +    P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE+
Sbjct:   240 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI 299

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSA 322
              + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SA
Sbjct:   300 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 359

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLA-IWVESNKKK---QKLFDILMSK 377
             T  +EV ++             G   +  N  + Q+  + +ES K     Q + +I+  K
Sbjct:   360 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 419

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             ++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P+++
Sbjct:   420 ENKT---IIFVETKRRCDDLTRRMR-RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 475

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    +EL
Sbjct:   476 ATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 535

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +L++ R
Sbjct:   536 IKVLEEANQAINPKLMQLVDHR 557


>UNIPROTKB|H3BLZ8 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0072358
            "cardiovascular system development" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
            ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
            Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
        Length = 731

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 143/442 (32%), Positives = 233/442 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKG-DAVPAPILSFSSCSLSQKL 146
             LP  ++ FYV    E+     LT  + D LR++ EI V+G D  P P+ +F   +  Q +
Sbjct:   127 LPKFEKNFYV----EHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYV 182

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS- 205
             +  +    +  PTP+Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H  
Sbjct:   183 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQP 237

Query:   206 --QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
               +    P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE+
Sbjct:   238 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI 297

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSA 322
              + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SA
Sbjct:   298 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 357

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLA-IWVESNKKK---QKLFDILMSK 377
             T  +EV ++             G   +  N  + Q+  + +ES K     Q + +I+  K
Sbjct:   358 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 417

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             ++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P+++
Sbjct:   418 ENKT---IIFVETKRRCDDLTRRMR-RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 473

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    +EL
Sbjct:   474 ATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 533

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +L++ R
Sbjct:   534 IKVLEEANQAINPKLMQLVDHR 555


>UNIPROTKB|Q92841 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0033148 "positive
            regulation of intracellular estrogen receptor signaling pathway"
            evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
            EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
            EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
            IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
            RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
            ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
            MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
            REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
            DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
            UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
            HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
            HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
            GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
            CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
            GO:GO:2001014 Uniprot:Q92841
        Length = 729

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 143/442 (32%), Positives = 233/442 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKG-DAVPAPILSFSSCSLSQKL 146
             LP  ++ FYV    E+     LT  + D LR++ EI V+G D  P P+ +F   +  Q +
Sbjct:   127 LPKFEKNFYV----EHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYV 182

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS- 205
             +  +    +  PTP+Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H  
Sbjct:   183 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQP 237

Query:   206 --QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
               +    P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE+
Sbjct:   238 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI 297

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSA 322
              + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SA
Sbjct:   298 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 357

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLA-IWVESNKKK---QKLFDILMSK 377
             T  +EV ++             G   +  N  + Q+  + +ES K     Q + +I+  K
Sbjct:   358 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 417

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             ++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P+++
Sbjct:   418 ENKT---IIFVETKRRCDDLTRRMR-RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 473

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    +EL
Sbjct:   474 ATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 533

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +L++ R
Sbjct:   534 IKVLEEANQAINPKLMQLVDHR 555


>UNIPROTKB|F1SKQ0 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
            EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
        Length = 736

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 143/442 (32%), Positives = 233/442 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKG-DAVPAPILSFSSCSLSQKL 146
             LP  ++ FYV    E+     LT  + D LR++ EI V+G D  P P+ +F   +  Q +
Sbjct:   129 LPKFEKNFYV----EHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYV 184

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS- 205
             +  +    +  PTP+Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H  
Sbjct:   185 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQP 239

Query:   206 --QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
               +    P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE+
Sbjct:   240 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI 299

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSA 322
              + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SA
Sbjct:   300 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 359

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLA-IWVESNKKK---QKLFDILMSK 377
             T  +EV ++             G   +  N  + Q+  + +ES K     Q + +I+  K
Sbjct:   360 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 419

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             ++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P+++
Sbjct:   420 ENKT---IIFVETKRRCDDLTRRMR-RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 475

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    +EL
Sbjct:   476 ATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 535

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +L++ R
Sbjct:   536 IKVLEEANQAINPKLMQLVDHR 557


>MGI|MGI:1914290 [details] [associations]
            symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0072358 "cardiovascular system
            development" evidence=IMP] [GO:2001014 "regulation of skeletal
            muscle cell differentiation" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
            GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
            GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
            ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
            EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
            RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
            UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
            IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
            REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
            GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
            InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
            CleanEx:MM_DDX17 Genevestigator:Q501J6
            GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
        Length = 650

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 143/442 (32%), Positives = 233/442 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKG-DAVPAPILSFSSCSLSQKL 146
             LP  ++ FYV    E+     LT  + D LR++ EI V+G D  P P+ +F   +  Q +
Sbjct:    48 LPKFEKNFYV----EHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYV 103

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS- 205
             +  +    +  PTP+Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H  
Sbjct:   104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQP 158

Query:   206 --QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
               +    P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE+
Sbjct:   159 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI 218

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSA 322
              + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SA
Sbjct:   219 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 278

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLA-IWVESNKKK---QKLFDILMSK 377
             T  +EV ++             G   +  N  + Q+  + +ES K     Q + +I+  K
Sbjct:   279 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 338

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             ++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P+++
Sbjct:   339 ENKT---IIFVETKRRCDDLTRRMR-RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 394

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    +EL
Sbjct:   395 ATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 454

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +L++ R
Sbjct:   455 IKVLEEANQAINPKLMQLVDHR 476


>UNIPROTKB|F1MYC6 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0032880 "regulation of protein localization"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
            GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
            OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
            EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
            Uniprot:F1MYC6
        Length = 729

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 133/418 (31%), Positives = 217/418 (51%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   256 DEDSIFAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTP 315

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP    G+ L+  A TGSGKTA+FL+P+++      I     +  + P  +++ P
Sbjct:   316 VQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAP 375

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG  +   + +I QG  ++  TPGRL+D++ K 
Sbjct:   376 TRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKE 435

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  ++  VLDE D ML  GF  ++ ++     +P     Q LM+SAT  +E++++  
Sbjct:   436 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 495

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    K++KL +IL  +       +V+V ++ 
Sbjct:   496 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEIL--RNIGDERTMVFVETKK 553

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   554 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQ 612

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVN-EENKNLFQELVDILKSSGAGIP 509
              VI FD+P++I EYVH+IGR  + G+ G AI F + E +  L Q LV +L  +   +P
Sbjct:   613 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQPLVKVLSDAQQDVP 670


>UNIPROTKB|Q5W5U4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
            IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
            ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
            GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
            OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
        Length = 729

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 133/418 (31%), Positives = 217/418 (51%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE+S F     G        + + V G   P  IL+F   +L Q L  NI  AGY   TP
Sbjct:   256 DEDSIFAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTP 315

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTP 218
             VQ  +IP    G+ L+  A TGSGKTA+FL+P+++      I     +  + P  +++ P
Sbjct:   316 VQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAP 375

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG  +   + +I QG  ++  TPGRL+D++ K 
Sbjct:   376 TRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKE 435

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  ++  VLDE D ML  GF  ++ ++     +P     Q LM+SAT  +E++++  
Sbjct:   436 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 495

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G+     + V+Q  + V    K++KL +IL  +       +V+V ++ 
Sbjct:   496 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEIL--RNIGDERTMVFVETKK 553

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F  G+ PV+VAT +  RG+++  V+
Sbjct:   554 KADFIATFLCQEK-ISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQ 612

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVN-EENKNLFQELVDILKSSGAGIP 509
              VI FD+P++I EYVH+IGR  + G+ G AI F + E +  L Q LV +L  +   +P
Sbjct:   613 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQPLVKVLSDAQQDVP 670


>UNIPROTKB|A8MTP9 [details] [associations]
            symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486
            HOVERGEN:HBG051332 EMBL:AC091199 HGNC:HGNC:20038
            PharmGKB:PA134904836 ChiTaRS:DDX52 NextBio:42007 IPI:IPI00394982
            ProteinModelPortal:A8MTP9 SMR:A8MTP9 STRING:A8MTP9 PRIDE:A8MTP9
            Ensembl:ENST00000394367 ArrayExpress:A8MTP9 Bgee:A8MTP9
            Uniprot:A8MTP9
        Length = 491

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 143/426 (33%), Positives = 233/426 (54%)

Query:    98 RESDENSG-FQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCS----LSQKLLQNIEA 152
             RES   SG  ++L   + + LR + +I+V+G  +P PI +F        ++ +LLQNI  
Sbjct:    15 RESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILD 74

Query:   153 AGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPL 212
             AG+ MPTP+QMQAIP  L G+ LL SA TGSGKT +F +P++ Q     L    N K   
Sbjct:    75 AGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQ-----LKQPAN-KGFR 128

Query:   213 AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY-RIQQGVELIVGTPGRL 271
             A++++PTREL  Q+  +   + +G  F+  ++      A++   +  +  +++V TP RL
Sbjct:   129 ALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRL 188

Query:   272 IDLLMKHD---IELDDIRMFVLDEVDCMLQ---RGFRDQVMQIFRAISLPQI--LMYSAT 323
             I LL K D   I+L  +   V+DE D + +    GFRDQ+  IF A +  ++   M+SAT
Sbjct:   189 IYLL-KQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSAT 247

Query:   324 ISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPP 383
              + +VE+              G  N   + V+Q  ++V S   K      L+ K+ F PP
Sbjct:   248 FAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELV-KKGFNPP 306

Query:   384 AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILG 443
              +V+V S   A  L + + +  G+    IH E+  ++R   + SF  G++ V++ T +L 
Sbjct:   307 VLVFVQSIERAKELFHEL-IYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLA 365

Query:   444 RGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKS 503
             RG++  GV  VI +D P S  EY+H+IGR  + G++G AI F  E++K L + + ++++ 
Sbjct:   366 RGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVANVIQQ 425

Query:   504 SGAGIP 509
             +G  +P
Sbjct:   426 AGCPVP 431


>UNIPROTKB|Q9Y2R4 [details] [associations]
            symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 CTD:11056 HOGENOM:HOG000242486
            HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
            EMBL:AF077033 EMBL:AK001652 EMBL:AK093661 EMBL:AC091199
            EMBL:BC041785 EMBL:AJ010840 IPI:IPI00032423 RefSeq:NP_008941.2
            UniGene:Hs.590937 PDB:3DKP PDBsum:3DKP ProteinModelPortal:Q9Y2R4
            SMR:Q9Y2R4 IntAct:Q9Y2R4 STRING:Q9Y2R4 PhosphoSite:Q9Y2R4
            DMDM:296439375 SWISS-2DPAGE:Q9Y2R4 PaxDb:Q9Y2R4 PRIDE:Q9Y2R4
            Ensembl:ENST00000349699 GeneID:11056 KEGG:hsa:11056 UCSC:uc002hoh.2
            GeneCards:GC17M035969 HGNC:HGNC:20038 MIM:612500 neXtProt:NX_Q9Y2R4
            PharmGKB:PA134904836 InParanoid:Q9Y2R4 PhylomeDB:Q9Y2R4
            ChiTaRS:DDX52 EvolutionaryTrace:Q9Y2R4 GenomeRNAi:11056
            NextBio:42007 ArrayExpress:Q9Y2R4 Bgee:Q9Y2R4 CleanEx:HS_DDX52
            Genevestigator:Q9Y2R4 GermOnline:ENSG00000141141 Uniprot:Q9Y2R4
        Length = 599

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 143/426 (33%), Positives = 233/426 (54%)

Query:    98 RESDENSG-FQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCS----LSQKLLQNIEA 152
             RES   SG  ++L   + + LR + +I+V+G  +P PI +F        ++ +LLQNI  
Sbjct:   123 RESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILD 182

Query:   153 AGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPL 212
             AG+ MPTP+QMQAIP  L G+ LL SA TGSGKT +F +P++ Q     L    N K   
Sbjct:   183 AGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQ-----LKQPAN-KGFR 236

Query:   213 AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY-RIQQGVELIVGTPGRL 271
             A++++PTREL  Q+  +   + +G  F+  ++      A++   +  +  +++V TP RL
Sbjct:   237 ALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRL 296

Query:   272 IDLLMKHD---IELDDIRMFVLDEVDCMLQ---RGFRDQVMQIFRAISLPQI--LMYSAT 323
             I LL K D   I+L  +   V+DE D + +    GFRDQ+  IF A +  ++   M+SAT
Sbjct:   297 IYLL-KQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSAT 355

Query:   324 ISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPP 383
              + +VE+              G  N   + V+Q  ++V S   K      L+ K+ F PP
Sbjct:   356 FAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELV-KKGFNPP 414

Query:   384 AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILG 443
              +V+V S   A  L + + +  G+    IH E+  ++R   + SF  G++ V++ T +L 
Sbjct:   415 VLVFVQSIERAKELFHEL-IYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLA 473

Query:   444 RGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKS 503
             RG++  GV  VI +D P S  EY+H+IGR  + G++G AI F  E++K L + + ++++ 
Sbjct:   474 RGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVANVIQQ 533

Query:   504 SGAGIP 509
             +G  +P
Sbjct:   534 AGCPVP 539


>UNIPROTKB|F1N991 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
            OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
            IPI:IPI00819436 ProteinModelPortal:F1N991
            Ensembl:ENSGALT00000023724 Uniprot:F1N991
        Length = 568

 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 133/418 (31%), Positives = 219/418 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE S F     G          + + G   PAP+L+F   + +Q L +NI   GY   TP
Sbjct:   133 DEQSIFACYQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTP 192

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS--QNQKNPLAMVLTP 218
             VQ  +IP   +G+ L+  A TGSGKTA+FL+P++ +     +  S  Q Q+ P  +++ P
Sbjct:   193 VQKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAP 252

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG      + +I QG  ++  TPGRL+D++ K 
Sbjct:   253 TRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKG 312

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L +++  VLDE D ML  GF   + ++     +P     Q LM+SAT  +EV+++  
Sbjct:   313 KISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAG 372

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G        V+Q  + V    K+ KL +IL S        +V+V ++ 
Sbjct:   373 EFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEILQSTGG--ERTMVFVDTKK 430

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD L+ A      + + SIHG++  +ER   +R F  G+  ++VAT +  RG+++  V+
Sbjct:   431 KADYLA-AFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASRGLDIENVQ 489

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK-NLFQELVDILKSSGAGIP 509
              VI FD+PN+I++YVH+IGR  + G+ G A+ F ++++  +L Q L+ +L  +   +P
Sbjct:   490 HVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLVQSLLKVLSEAQQEVP 547


>UNIPROTKB|F1NAH6 [details] [associations]
            symbol:LOC100859810 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0035458 "cellular response to interferon-beta" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
            to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
            EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
            Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
        Length = 607

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 129/403 (32%), Positives = 217/403 (53%)

Query:   117 LRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLL 176
             +RK+  I V+G+ +P PI SF        +L+ ++  G   PTP+Q+Q IP+ LSG+ ++
Sbjct:   159 VRKKYHILVEGEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMI 218

Query:   177 VSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ----VEEQA 230
               A TGSGKT  F +PVI  C     RL  S+ +  P  +++ P+REL  Q    +E   
Sbjct:   219 GIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE-GPYGLIICPSRELARQTHGIIEYYC 277

Query:   231 KLLGKGL--PFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF 288
             +LL +    P + AL +GG ++  Q+  I+ GV ++V TPGRL+DLL K  + LD  R  
Sbjct:   278 RLLQEDSLPPLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYL 337

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
              LDE D M+  GF   +  IF       Q L++SAT+ ++++               G+ 
Sbjct:   338 ALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRA 397

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
                +  V Q    VE  K++ K+  +L   Q   PP +++   +   D +   + +  G+
Sbjct:   398 GAASLDVVQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYL-LLKGV 453

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
             +A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ VI +DMP  I+ YV
Sbjct:   454 EAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYV 513

Query:   468 HQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
             H+IGR  + G+ G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   514 HRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 556


>WB|WBGene00019245 [details] [associations]
            symbol:sacy-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
            epithelium" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
            GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
            OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
            ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
            EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
            UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
            NextBio:875413 Uniprot:Q9N5K1
        Length = 630

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 132/406 (32%), Positives = 219/406 (53%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAA-GYDMPTPVQMQAIPSALSGKSLL 176
             RKRL I+ +GD +P PI SF      + LL+ ++   G   PT +Q+Q IP ALSG+ ++
Sbjct:   172 RKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMI 231

Query:   177 VSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTPTRELCIQVE----EQA 230
               A+TGSGKT +F++P++  C    ++L   +++  P  +++ P+REL  Q+     E  
Sbjct:   232 GIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE-GPFGLIIVPSRELARQIFDLIIEMF 290

Query:   231 KLLGK-GLP-FKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF 288
               LGK GLP  +  L +GG  +  Q   ++ G+ ++V TPGRL D+L K  I L+  R  
Sbjct:   291 DALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYL 350

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D ML  GF D++  IF       Q L++SAT+ ++++               G+ 
Sbjct:   351 VLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRA 410

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
                +  V Q   +V S  K  ++ + L   Q  +P  +++   ++  D +   + V  G+
Sbjct:   411 GAASLNVLQELEFVRSENKLVRVLECL---QKTSPKVLIFAEKKVDVDNIYEYLLVK-GV 466

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
             +  SIHG K   +R   + +F   E  V+VAT +  +G++  G+  VI FDMP  I+ YV
Sbjct:   467 EVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYV 526

Query:   468 HQIGRASQMGDEGTAIVFVNEENK-NLFQELVDILKSSGAGIPREL 512
             H+IGR  + G +G A  F+N++++ ++  +L  +L  +G  +P  L
Sbjct:   527 HRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFL 572


>UNIPROTKB|Q83DM8 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
            KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
            BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
        Length = 420

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 125/381 (32%), Positives = 218/381 (57%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SF    LS +LL+ I   GY  PTPVQ QAIP  L  + ++V+A TG+GKTA F +P++
Sbjct:    10 MSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLL 69

Query:   195 SQCANIRLHHSQNQKNPL-AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253
              +    R    ++ K  + A++LTPTREL +QV E  +  GK LP K  +V GG ++  Q
Sbjct:    70 QRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQ 129

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI- 312
             +  +++GV+++V TPGRL+DL+ +  + L  +  FVLDE D ML  GF   + +I + + 
Sbjct:   130 INHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLP 189

Query:   313 SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                Q L++SAT S+E++++              + N     +  +   V+  +K++ L  
Sbjct:   190 ESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRELLSF 249

Query:   373 ILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
             ++ SK       +V+  ++ GA+ LS  +  + G+ + +IHG K    R   +  F  G+
Sbjct:   250 MIGSKNW--RQVLVFTRTKHGANRLSQQLE-SDGLSSAAIHGNKSQAARMRALTQFKQGK 306

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492
             + V+VAT +  RG+++  +  VI F++P++ K+YVH++GR  +  ++G AI  V+ +   
Sbjct:   307 IRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVR 366

Query:   493 LFQELVDILKSSGAGIPRELI 513
             L +++  +L+S    +P+E+I
Sbjct:   367 LLRDIEKLLQSK---MPQEVI 384


>UNIPROTKB|Q8EE19 [details] [associations]
            symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
            GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
            ProtClustDB:CLSK906777 Uniprot:Q8EE19
        Length = 475

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 124/380 (32%), Positives = 215/380 (56%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + FS   L   L++ +   GY  PTP+Q QAIPS L+GK++L +A TG+GKTASF++P++
Sbjct:     1 MPFSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              + A+         K   +++LTPTREL +QVE+      K LP     + GG   A Q 
Sbjct:    61 HRFADAP---KIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQK 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
              R+ +GV+L+V TPGRL+D+  +  I  D++ + VLDE D ML  GF + +  I   +  
Sbjct:   118 KRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPE 177

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q L++SAT+S++V+ +              + N  +  + Q    V+ ++K   L  +
Sbjct:   178 QRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHL 237

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             +  K++    A++++ ++ GA  L + +    G+ A + H  +    R +++  F  G+V
Sbjct:   238 I--KENNWAQALIFIQTKHGAAKLVSQLE-KRGIVAEAFHSGRSQAIREQLLIDFKAGKV 294

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
             P +VATG++ RG+++  + +VI +D+P+   +Y+H+IGR  + G++G AI FV++++   
Sbjct:   295 PFLVATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDD--- 351

Query:   494 FQELVDILKSSGAGIPRELI 513
             F+ L  I +  G  I R+ I
Sbjct:   352 FRNLCAIERRLGHIIERKNI 371


>UNIPROTKB|Q9KMW4 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 125/362 (34%), Positives = 208/362 (57%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + F+S  LS  +L+ IE  GY+ P+P+Q+QAIP+ L+GK ++ +A TG+GKTA F +P++
Sbjct:     1 MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
                A      + NQ    A++LTPTREL  Q+++   L G+ LP K+A+V GG  +  Q+
Sbjct:    61 ELLAKGPKVRA-NQVR--ALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQM 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
              R+ +G +++V TPGRL+DL  ++ ++ D + + VLDE D ML  GF   + +I + +  
Sbjct:   118 QRMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPE 177

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q L++SAT S E+ ++                N   + V+Q  I+    KKK  +  +
Sbjct:   178 KRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ-CIYPADVKKKPDML-V 235

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
              + K+      +V++ ++ GA+ L+  ++   G+ A +IHG K    R   +  F  GEV
Sbjct:   236 KLVKEGNWQQVLVFMRTKHGANRLATYLN-EQGLTAAAIHGNKSQGARTRALADFKAGEV 294

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNE-ENKN 492
              ++VAT I  RG+++  + QV+ F++P   ++YVH+IGR  + G+ G AI  V+  E   
Sbjct:   295 RILVATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPE 354

Query:   493 LF 494
             LF
Sbjct:   355 LF 356


>TIGR_CMR|CBU_0670 [details] [associations]
            symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
            putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
            GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
            ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
            Uniprot:Q83DM8
        Length = 420

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 125/381 (32%), Positives = 218/381 (57%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SF    LS +LL+ I   GY  PTPVQ QAIP  L  + ++V+A TG+GKTA F +P++
Sbjct:    10 MSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLL 69

Query:   195 SQCANIRLHHSQNQKNPL-AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253
              +    R    ++ K  + A++LTPTREL +QV E  +  GK LP K  +V GG ++  Q
Sbjct:    70 QRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQ 129

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI- 312
             +  +++GV+++V TPGRL+DL+ +  + L  +  FVLDE D ML  GF   + +I + + 
Sbjct:   130 INHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLP 189

Query:   313 SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                Q L++SAT S+E++++              + N     +  +   V+  +K++ L  
Sbjct:   190 ESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRELLSF 249

Query:   373 ILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
             ++ SK       +V+  ++ GA+ LS  +  + G+ + +IHG K    R   +  F  G+
Sbjct:   250 MIGSKNW--RQVLVFTRTKHGANRLSQQLE-SDGLSSAAIHGNKSQAARMRALTQFKQGK 306

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492
             + V+VAT +  RG+++  +  VI F++P++ K+YVH++GR  +  ++G AI  V+ +   
Sbjct:   307 IRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVR 366

Query:   493 LFQELVDILKSSGAGIPRELI 513
             L +++  +L+S    +P+E+I
Sbjct:   367 LLRDIEKLLQSK---MPQEVI 384


>TIGR_CMR|SO_1383 [details] [associations]
            symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
            ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
            PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
        Length = 433

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 130/378 (34%), Positives = 207/378 (54%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + F S S   ++L+ I   GY   TP+Q QAIP+   G+ +L SA TG+GKTA+F +P++
Sbjct:     1 MRFESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPIL 60

Query:   195 SQCANIRLHHSQNQK-NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253
              +      + S+  K N   ++LTPTREL  QV E  +   K L F    + GG  +  Q
Sbjct:    61 QKMVE---NPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQ 117

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS 313
               ++++G ++IV TPGRL++ L   ++ L  +   VLDE D ML  GF   + +I +A++
Sbjct:   118 AQKLKRGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVN 177

Query:   314 LP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                Q L++SAT S  V+K+              K N     V Q+   VE  +K++ L +
Sbjct:   178 KKRQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSE 237

Query:   373 ILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
              L+ K+++    +V+  +R  AD L   +++  G+ +  +HGEK    RR  +R F+ G+
Sbjct:   238 -LIGKKNWQQ-VLVFTATRDAADTLVKELNLD-GIPSEVVHGEKAQGSRRRALREFVSGK 294

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492
             V V+VAT +  RG+++  +  V+ FD+P   ++YVH+IGR  + G  G AI FV+ E + 
Sbjct:   295 VRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEE- 353

Query:   493 LFQELVDILKSSGAGIPR 510
               + L DI K  G  I R
Sbjct:   354 --RTLADIEKLIGQKIRR 369


>TIGR_CMR|SO_2571 [details] [associations]
            symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
            GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
            ProtClustDB:CLSK906777 Uniprot:Q8EE19
        Length = 475

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 124/380 (32%), Positives = 215/380 (56%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + FS   L   L++ +   GY  PTP+Q QAIPS L+GK++L +A TG+GKTASF++P++
Sbjct:     1 MPFSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              + A+         K   +++LTPTREL +QVE+      K LP     + GG   A Q 
Sbjct:    61 HRFADAP---KIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQK 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
              R+ +GV+L+V TPGRL+D+  +  I  D++ + VLDE D ML  GF + +  I   +  
Sbjct:   118 KRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPE 177

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q L++SAT+S++V+ +              + N  +  + Q    V+ ++K   L  +
Sbjct:   178 QRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHL 237

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             +  K++    A++++ ++ GA  L + +    G+ A + H  +    R +++  F  G+V
Sbjct:   238 I--KENNWAQALIFIQTKHGAAKLVSQLE-KRGIVAEAFHSGRSQAIREQLLIDFKAGKV 294

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
             P +VATG++ RG+++  + +VI +D+P+   +Y+H+IGR  + G++G AI FV++++   
Sbjct:   295 PFLVATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDD--- 351

Query:   494 FQELVDILKSSGAGIPRELI 513
             F+ L  I +  G  I R+ I
Sbjct:   352 FRNLCAIERRLGHIIERKNI 371


>TIGR_CMR|VC_A0204 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 125/362 (34%), Positives = 208/362 (57%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + F+S  LS  +L+ IE  GY+ P+P+Q+QAIP+ L+GK ++ +A TG+GKTA F +P++
Sbjct:     1 MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
                A      + NQ    A++LTPTREL  Q+++   L G+ LP K+A+V GG  +  Q+
Sbjct:    61 ELLAKGPKVRA-NQVR--ALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQM 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
              R+ +G +++V TPGRL+DL  ++ ++ D + + VLDE D ML  GF   + +I + +  
Sbjct:   118 QRMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPE 177

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q L++SAT S E+ ++                N   + V+Q  I+    KKK  +  +
Sbjct:   178 KRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQ-CIYPADVKKKPDML-V 235

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
              + K+      +V++ ++ GA+ L+  ++   G+ A +IHG K    R   +  F  GEV
Sbjct:   236 KLVKEGNWQQVLVFMRTKHGANRLATYLN-EQGLTAAAIHGNKSQGARTRALADFKAGEV 294

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNE-ENKN 492
              ++VAT I  RG+++  + QV+ F++P   ++YVH+IGR  + G+ G AI  V+  E   
Sbjct:   295 RILVATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPE 354

Query:   493 LF 494
             LF
Sbjct:   355 LF 356


>MGI|MGI:1925644 [details] [associations]
            symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1925644 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003723 EMBL:CH466556 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 CTD:11056
            GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
            HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
            EMBL:AK080767 EMBL:AK133545 EMBL:AL645615 EMBL:BC029094
            IPI:IPI00336965 RefSeq:NP_084372.2 UniGene:Mm.280544
            ProteinModelPortal:Q8K301 SMR:Q8K301 STRING:Q8K301
            PhosphoSite:Q8K301 PaxDb:Q8K301 PRIDE:Q8K301
            Ensembl:ENSMUST00000049257 GeneID:78394 KEGG:mmu:78394
            InParanoid:Q3UZY9 NextBio:348796 Bgee:Q8K301 CleanEx:MM_DDX52
            Genevestigator:Q8K301 GermOnline:ENSMUSG00000020677 Uniprot:Q8K301
        Length = 598

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 144/431 (33%), Positives = 235/431 (54%)

Query:   101 DEN-SGFQSLTIGQTDSLRK--------RLEINVKGDAVPAPILSFSSCS----LSQKLL 147
             DE  SG + LT G+ + LRK        + +I+V+G  +P PI +F        ++ +LL
Sbjct:   119 DEKVSGEKKLTSGKLEHLRKEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLL 178

Query:   148 QNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQN 207
             QNI  AG+ +PTP+QMQAIP  L G+ LL SA TGSGKT +F +P++ Q     L    N
Sbjct:   179 QNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQ-----LKQPTN 233

Query:   208 QKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY-RIQQGVELIVG 266
              K   A+V++PTREL  Q+  +   + +G  F+  ++      A++   +  +  +++V 
Sbjct:   234 -KGFRALVISPTRELASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVT 292

Query:   267 TPGRLIDLLMKHD---IELDDIRMFVLDEVDCMLQ---RGFRDQVMQIFRAISLPQI--L 318
             TP RLI LL K D   I+L ++   V+DE D + +    GFR+Q+  IF A + P++   
Sbjct:   293 TPNRLIYLL-KQDPPGIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSPKVRRA 351

Query:   319 MYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQ 378
             M+SAT + +VE+              G  N   + V+Q  ++V S   K      L+ K+
Sbjct:   352 MFSATFAYDVEQWCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELV-KK 410

Query:   379 HFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVA 438
              F PP +V+V S   A  L + + +  G+    IH E+  ++R   + SF  G++ V++ 
Sbjct:   411 GFKPPVLVFVQSIERAKELFHEL-IYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLIC 469

Query:   439 TGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELV 498
             T +L RG++  GV  VI +D P S  EY+H+IGR  + G+ G A+ F  E++K L + + 
Sbjct:   470 TALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVA 529

Query:   499 DILKSSGAGIP 509
             ++++ +G  +P
Sbjct:   530 NVIQQAGCPVP 540


>ZFIN|ZDB-GENE-030131-925 [details] [associations]
            symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
            ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
        Length = 617

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 139/437 (31%), Positives = 222/437 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     EN      +  + +  R+  EI VKG   P PI+ F   +  + 
Sbjct:    51 DELPKFEKNFY----QENPDVARRSAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKY 106

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  I    +  PTP+Q Q  P ALSGK ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   107 VMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAI-----VHINHQ 161

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                ++   P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE
Sbjct:   162 PFLEHGDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVE 221

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   222 ICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 281

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKKKQKLF----DILMS 376
             AT  +EV ++             G   +  N  + Q+       +K+ KL     +I+  
Sbjct:   282 ATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSE 341

Query:   377 KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVI 436
             K++ T   +++V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P++
Sbjct:   342 KENKT---IIFVETKRRCDDLTRRMR-RDGWPAMGIHGDKNQQERDWVLNEFKYGKAPIL 397

Query:   437 VATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQE 496
             +AT +  RG+++  V+ VI FD PN+ ++Y+H+IGR ++    GTA  F    N     +
Sbjct:   398 IATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHD 457

Query:   497 LVDILKSSGAGIPRELI 513
             LV +L+ +   I  +LI
Sbjct:   458 LVSVLREANQAINPKLI 474


>UNIPROTKB|F1NL04 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
            of protein localization" evidence=IEA] [GO:0033391 "chromatoid
            body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
            EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
            Ensembl:ENSGALT00000038830 Uniprot:F1NL04
        Length = 542

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 132/413 (31%), Positives = 217/413 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             DE S F     G          + + G   PAP+L+F   + +Q L +NI   GY   TP
Sbjct:   133 DEQSIFACYQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTP 192

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS--QNQKNPLAMVLTP 218
             VQ  +IP   +G+ L+  A TGSGKTA+FL+P++ +     +  S  Q Q+ P  +++ P
Sbjct:   193 VQKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAP 252

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  ++ GG      + +I QG  ++  TPGRL+D++ K 
Sbjct:   253 TRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKG 312

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L +++  VLDE D ML  GF   + ++     +P     Q LM+SAT  +EV+++  
Sbjct:   313 KISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAG 372

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G        V+Q  + V    K+ KL +IL S        +V+V ++ 
Sbjct:   373 EFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEILQSTGG--ERTMVFVDTKK 430

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD L+ A      + + SIHG++  +ER   +R F  G+  ++VAT +  RG+++  V+
Sbjct:   431 KADYLA-AFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASRGLDIENVQ 489

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK-NLFQELVDILKSS 504
              VI FD+PN+I++YVH+IGR  + G+ G A+ F ++++  +L Q L+ +L  +
Sbjct:   490 HVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLVQSLLKVLSEA 542


>RGD|1311758 [details] [associations]
            symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
            evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
            "defense response to virus" evidence=IEA;ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
            RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
            Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
            UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
            Uniprot:B2RYL8
        Length = 622

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 132/412 (32%), Positives = 223/412 (54%)

Query:   108 SLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             S++  + + +RK+  I V+GD +P PI SF    L   +L+ ++  G   PTP+Q+Q IP
Sbjct:   154 SMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIP 213

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ 225
             + LSG+ ++  A TGSGKT  F +PVI  C     RL  S+ +  P  +++ P+REL  Q
Sbjct:   214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE-GPYGLIICPSRELARQ 272

Query:   226 ----VEEQAKLLGK-GLPF-KTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
                 +E   +LL +   P  + AL +GG ++  Q+  I+ GV ++V TPGRL+DLL K  
Sbjct:   273 THGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKM 332

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXX 338
             + LD  R   LDE D M+  GF   +  IF       Q L++SAT+ ++++         
Sbjct:   333 VSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVK 392

Query:   339 XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLS 398
                   G+    +  V Q    VE  K++ K+  +L   Q   PP +++   +   D + 
Sbjct:   393 PVTINVGRAGAASLDVIQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIH 449

Query:   399 NAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD 458
               + +  G++A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ VI +D
Sbjct:   450 EYL-LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 508

Query:   459 MPNSIKEYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
             MP  I+ YVH+IGR  + G+ G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   509 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>UNIPROTKB|A3KN07 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0035458 "cellular response to
            interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
            KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
            RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
            Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
            InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
        Length = 622

 Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
 Identities = 131/412 (31%), Positives = 222/412 (53%)

Query:   108 SLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             S++  + + +RK+  I V+GD +P PI SF        +L+ ++  G   PTP+Q+Q IP
Sbjct:   154 SMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIP 213

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ 225
             + LSG+ ++  A TGSGKT  F +PVI  C     RL  S+ +  P  +++ P+REL  Q
Sbjct:   214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE-GPYGLIICPSRELARQ 272

Query:   226 ----VEEQAKLLGK-GLPF-KTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
                 +E   +LL +   P  + AL +GG ++  Q+  I+ GV ++V TPGRL+DLL K  
Sbjct:   273 THGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKM 332

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXX 338
             + LD  R   LDE D M+  GF   +  IF       Q L++SAT+ ++++         
Sbjct:   333 VSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVK 392

Query:   339 XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLS 398
                   G+    +  V Q    VE  K++ K+  +L   Q   PP +++   +   D + 
Sbjct:   393 PVTINVGRAGAASLDVIQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIH 449

Query:   399 NAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD 458
               + +  G++A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ VI +D
Sbjct:   450 EYL-LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 508

Query:   459 MPNSIKEYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
             MP  I+ YVH+IGR  + G+ G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   509 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>UNIPROTKB|E2R052 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
            response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
            RefSeq:XP_536417.2 ProteinModelPortal:E2R052
            Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
            NextBio:20854482 Uniprot:E2R052
        Length = 622

 Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
 Identities = 131/412 (31%), Positives = 222/412 (53%)

Query:   108 SLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             S++  + + +RK+  I V+GD +P PI SF        +L+ ++  G   PTP+Q+Q IP
Sbjct:   154 SMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIP 213

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ 225
             + LSG+ ++  A TGSGKT  F +PVI  C     RL  S+ +  P  +++ P+REL  Q
Sbjct:   214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE-GPYGLIICPSRELARQ 272

Query:   226 ----VEEQAKLLGK-GLPF-KTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
                 +E   +LL +   P  + AL +GG ++  Q+  I+ GV ++V TPGRL+DLL K  
Sbjct:   273 THGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKM 332

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXX 338
             + LD  R   LDE D M+  GF   +  IF       Q L++SAT+ ++++         
Sbjct:   333 VSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVK 392

Query:   339 XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLS 398
                   G+    +  V Q    VE  K++ K+  +L   Q   PP +++   +   D + 
Sbjct:   393 PVTINVGRAGAASLDVIQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIH 449

Query:   399 NAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD 458
               + +  G++A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ VI +D
Sbjct:   450 EYL-LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 508

Query:   459 MPNSIKEYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
             MP  I+ YVH+IGR  + G+ G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   509 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>UNIPROTKB|J9NZF6 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
            GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
            Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
        Length = 649

 Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
 Identities = 131/412 (31%), Positives = 222/412 (53%)

Query:   108 SLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             S++  + + +RK+  I V+GD +P PI SF        +L+ ++  G   PTP+Q+Q IP
Sbjct:   181 SMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIP 240

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ 225
             + LSG+ ++  A TGSGKT  F +PVI  C     RL  S+ +  P  +++ P+REL  Q
Sbjct:   241 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE-GPYGLIICPSRELARQ 299

Query:   226 ----VEEQAKLLGK-GLPF-KTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
                 +E   +LL +   P  + AL +GG ++  Q+  I+ GV ++V TPGRL+DLL K  
Sbjct:   300 THGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKM 359

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXX 338
             + LD  R   LDE D M+  GF   +  IF       Q L++SAT+ ++++         
Sbjct:   360 VSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVK 419

Query:   339 XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLS 398
                   G+    +  V Q    VE  K++ K+  +L   Q   PP +++   +   D + 
Sbjct:   420 PVTINVGRAGAASLDVIQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIH 476

Query:   399 NAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD 458
               + +  G++A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ VI +D
Sbjct:   477 EYL-LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 535

Query:   459 MPNSIKEYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
             MP  I+ YVH+IGR  + G+ G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   536 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 587


>UNIPROTKB|J3KNN5 [details] [associations]
            symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
            GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
            Ensembl:ENST00000330503 Uniprot:J3KNN5
        Length = 640

 Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
 Identities = 131/412 (31%), Positives = 222/412 (53%)

Query:   108 SLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             S++  + + +RK+  I V+GD +P PI SF        +L+ ++  G   PTP+Q+Q IP
Sbjct:   172 SMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIP 231

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ 225
             + LSG+ ++  A TGSGKT  F +PVI  C     RL  S+ +  P  +++ P+REL  Q
Sbjct:   232 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE-GPYGLIICPSRELARQ 290

Query:   226 ----VEEQAKLLGK-GLPF-KTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
                 +E   +LL +   P  + AL +GG ++  Q+  I+ GV ++V TPGRL+DLL K  
Sbjct:   291 THGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKM 350

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXX 338
             + LD  R   LDE D M+  GF   +  IF       Q L++SAT+ ++++         
Sbjct:   351 VSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVK 410

Query:   339 XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLS 398
                   G+    +  V Q    VE  K++ K+  +L   Q   PP +++   +   D + 
Sbjct:   411 PVTINVGRAGAASLDVIQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIH 467

Query:   399 NAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD 458
               + +  G++A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ VI +D
Sbjct:   468 EYL-LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 526

Query:   459 MPNSIKEYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
             MP  I+ YVH+IGR  + G+ G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   527 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 578


>UNIPROTKB|Q9UJV9 [details] [associations]
            symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
            "cellular response to interferon-beta" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0051607 "defense response to virus"
            evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
            GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
            EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
            EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
            UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
            SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
            PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
            PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
            KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
            HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
            PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
            OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
            EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
            ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
            Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
        Length = 622

 Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
 Identities = 131/412 (31%), Positives = 222/412 (53%)

Query:   108 SLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             S++  + + +RK+  I V+GD +P PI SF        +L+ ++  G   PTP+Q+Q IP
Sbjct:   154 SMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIP 213

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ 225
             + LSG+ ++  A TGSGKT  F +PVI  C     RL  S+ +  P  +++ P+REL  Q
Sbjct:   214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE-GPYGLIICPSRELARQ 272

Query:   226 ----VEEQAKLLGK-GLPF-KTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
                 +E   +LL +   P  + AL +GG ++  Q+  I+ GV ++V TPGRL+DLL K  
Sbjct:   273 THGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKM 332

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXX 338
             + LD  R   LDE D M+  GF   +  IF       Q L++SAT+ ++++         
Sbjct:   333 VSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVK 392

Query:   339 XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLS 398
                   G+    +  V Q    VE  K++ K+  +L   Q   PP +++   +   D + 
Sbjct:   393 PVTINVGRAGAASLDVIQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIH 449

Query:   399 NAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD 458
               + +  G++A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ VI +D
Sbjct:   450 EYL-LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 508

Query:   459 MPNSIKEYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
             MP  I+ YVH+IGR  + G+ G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   509 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>UNIPROTKB|Q48PB7 [details] [associations]
            symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
            putative" species:264730 "Pseudomonas syringae pv. phaseolicola
            1448A" [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
            KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
            ProtClustDB:CLSK865855 Uniprot:Q48PB7
        Length = 625

 Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
 Identities = 127/372 (34%), Positives = 205/372 (55%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SF+S  LS+ L++ IEAAGY  PTPVQ +AIP+ L G+ L+V+A TG+GKT  F +P++
Sbjct:     1 MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query:   195 SQC-ANIRLHHSQNQ--KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMA 251
              +   N     SQ    + P  +VLTPTREL  QV E  KL  + L F +A + GG  M 
Sbjct:    61 ERLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMN 120

Query:   252 RQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIF-R 310
              QV  + +GV+++V  PGRL+DL  +  ++L  + + VLDE D ML  GF   V ++  R
Sbjct:   121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180

Query:   311 AISLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKL 370
               +  Q L++SAT S ++  +               PN   + ++Q    + +N K+  L
Sbjct:   181 LPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANHKRSLL 240

Query:   371 FDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
               ++          +V+  ++ GA+ L+  +    G+ A++IHG K    R + +  F  
Sbjct:   241 AHLITVGAW--EQVLVFTRTKHGANRLAEYLD-KHGLAAVAIHGNKSQNARTKALADFKA 297

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN 490
             G+V ++VAT I  RG+++  +  V+ F++PN  ++YVH+IGR  + G  G AI  V  + 
Sbjct:   298 GDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDE 357

Query:   491 KNLFQELVDILK 502
             + L + +  + K
Sbjct:   358 EKLLKSIERMTK 369


>UNIPROTKB|E1BSC0 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
            IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
        Length = 1031

 Score = 560 (202.2 bits), Expect = 2.7e-53, P = 2.7e-53
 Identities = 134/423 (31%), Positives = 224/423 (52%)

Query:    95 FYVRESDENSGFQSLTIGQTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAA 153
             FYV E  E      +T  + +  R  +E I VKG   P PI ++  C +S K+L  ++  
Sbjct:   334 FYV-EVPE---LAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKH 389

Query:   154 GYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLA 213
             GY+ PTP+Q QAIP+ ++G+ L+  A TGSGKT +FL+P+     + R    +  + P+A
Sbjct:   390 GYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRA--LEEGEGPIA 447

Query:   214 MVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLID 273
             +++TPTREL +Q+ ++ K   K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID
Sbjct:   448 VIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 507

Query:   274 LLMKHDIELDDIRMF---VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVE 329
             +L  ++  + ++R     VLDE D M   GF  QVM+I   +    Q +M+SAT  + +E
Sbjct:   508 MLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAME 567

Query:   330 KMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVG 389
              +             G  ++    V+Q  I +E   K  KL ++L   Q      +++V 
Sbjct:   568 ALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQE-KGSVIIFVD 626

Query:   390 SRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELL 449
              +  AD L   + +      LS+HG     +R  I+  F  G   ++VAT +  RG+++ 
Sbjct:   627 KQEHADGLLKDL-MRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVK 685

Query:   450 GVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
              +  V+ +  PN  ++YVH+ GR  + G++G A  F+ E+      +++  L+ SG  IP
Sbjct:   686 QLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQARYAGDIIKALELSGNPIP 745

Query:   510 REL 512
              +L
Sbjct:   746 ADL 748


>ZFIN|ZDB-GENE-030131-667 [details] [associations]
            symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
            pancreas development" evidence=IMP] [GO:0007420 "brain development"
            evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
            evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
            GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
            GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
            EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
            ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
        Length = 1035

 Score = 559 (201.8 bits), Expect = 3.6e-53, P = 3.6e-53
 Identities = 131/406 (32%), Positives = 218/406 (53%)

Query:   113 QTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALS 171
             +    R  LE I+VKG   P PI ++  C +S K+L  ++   Y+ PTP+Q QAIP+ +S
Sbjct:   334 EVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMS 393

Query:   172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAK 231
             G+ L+  A TGSGKT +FL+P+     + R       + PLA+++TPTREL +Q+ ++ K
Sbjct:   394 GRDLIGIAKTGSGKTIAFLLPMFRHILDQR--PVGEAEGPLAVIMTPTRELALQITKECK 451

Query:   232 LLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF--- 288
                K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID+L  ++  + ++R     
Sbjct:   452 KFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYV 511

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             V+DE D M   GF  QVM+I   +    Q +M+SAT  + +E +             G  
Sbjct:   512 VIDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGR 571

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGAD-LLSNAISVTTG 406
             ++    V+Q  I +E  KK  KL +IL   Q      +++V  +  AD LL + +  +  
Sbjct:   572 SVVCSDVEQHVIVIEEEKKFLKLLEILGHYQE-KGSVIIFVDKQEHADGLLKDLMKAS-- 628

Query:   407 MKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEY 466
                +S+HG     +R  I+  F  G   ++VAT +  RG+++  +  V+ +  PN  ++Y
Sbjct:   629 YPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDY 688

Query:   467 VHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             VH+ GR  + G++G A  F+ E       +++  L+ SG+ +P EL
Sbjct:   689 VHRAGRTGRAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAEL 734


>UNIPROTKB|C9JMU5 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
            HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
            STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
            ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
        Length = 652

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 143/444 (32%), Positives = 233/444 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKG-DAVPAPILSFSSCSLSQKL 146
             LP  ++ FYV    E+     LT  + D LR++ EI V+G D  P P+ +F   +  Q +
Sbjct:    48 LPKFEKNFYV----EHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYV 103

Query:   147 LQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS- 205
             +  +    +  PTP+Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H  
Sbjct:   104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQP 158

Query:   206 --QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
               +    P+ +VL PTREL  QV++ A   GK    K+  + GG     Q+  +++GVE+
Sbjct:   159 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI 218

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSA 322
              + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SA
Sbjct:   219 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 278

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLA-IWVESNKKK---QKLFDILMSK 377
             T  +EV ++             G   +  N  + Q+  + +ES K     Q + +I+  K
Sbjct:   279 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 338

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             ++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P+++
Sbjct:   339 ENKT---IIFVETKRRCDDLTRRMR-RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILI 394

Query:   438 ATGILGRGV--ELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             AT +  RG+  ++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    +
Sbjct:   395 ATDVASRGLGFDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAR 454

Query:   496 ELVDILKSSGAGI-PR--ELINSR 516
             EL+ +L+ +   I P+  +L++ R
Sbjct:   455 ELIKVLEEANQAINPKLMQLVDHR 478


>UNIPROTKB|Q4K4H4 [details] [associations]
            symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
            EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
            ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
            PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
        Length = 622

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 126/372 (33%), Positives = 206/372 (55%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SF+S  LS+ L+  IEAAGY  PTPVQ +AIP+ L G+ L+V+A TG+GKT  F +P++
Sbjct:     1 MSFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query:   195 SQC-ANIRLHHSQNQ--KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMA 251
              +   N     SQ    + P  +VLTPTREL  QV +  KL  + L F +A + GG  M 
Sbjct:    61 ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMN 120

Query:   252 RQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIF-R 310
              QV  + +GV+++V  PGRL+DL  +  ++L  + + VLDE D ML  GF   V ++  R
Sbjct:   121 PQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180

Query:   311 AISLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKL 370
               +  Q L++SAT S+++  +               PN   + ++Q    + ++ K+  L
Sbjct:   181 LPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALL 240

Query:   371 FDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
               ++ +        +V+  ++ GA+ L+  +    G+ A++IHG K    R + +  F  
Sbjct:   241 AHLITAGAW--EQVLVFTRTKHGANRLAEYLD-KHGLSAVAIHGNKSQNARTKALADFKA 297

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN 490
             GEV ++VAT I  RG+++  +  V+ F++PN  ++YVH+IGR  + G  G AI  V  + 
Sbjct:   298 GEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDE 357

Query:   491 KNLFQELVDILK 502
             + L + +  + K
Sbjct:   358 EKLLKSIERMTK 369


>RGD|621743 [details] [associations]
            symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=NAS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:621743
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            CTD:11056 GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
            HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
            EMBL:AB055628 IPI:IPI00201365 RefSeq:NP_445977.1 UniGene:Rn.18605
            ProteinModelPortal:Q99PT0 SMR:Q99PT0 PRIDE:Q99PT0
            Ensembl:ENSRNOT00000003600 GeneID:85432 KEGG:rno:85432
            InParanoid:Q99PT0 NextBio:617542 Genevestigator:Q99PT0
            GermOnline:ENSRNOG00000002612 Uniprot:Q99PT0
        Length = 598

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 135/404 (33%), Positives = 221/404 (54%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCS----LSQKLLQNIEAAGYDMPTPVQMQAIPSALSGK 173
             R + +I+V+G  +P PI +F        +S +LLQNI  AG+ +PTP+QMQAIP  L G+
Sbjct:   145 RNKHKIHVQGTDLPDPIATFQQLDQEYKISPRLLQNILDAGFQVPTPIQMQAIPVMLHGR 204

Query:   174 SLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLL 233
              LL SA TGSGKT +F +P++ Q     L    N K   A+V++PTREL  Q+  +   +
Sbjct:   205 ELLASAPTGSGKTLAFSIPILMQ-----LKQPTN-KGFRALVISPTRELASQIHRELIKI 258

Query:   234 GKGLPFKTALVVGGDAMARQVY-RIQQGVELIVGTPGRLIDLLMKHD--IELDDIRMFVL 290
              +G  F+  ++      A++   +  +  +++V TP RLI LL +    I+L  +   V+
Sbjct:   259 SEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPPGIDLTSVEWLVV 318

Query:   291 DEVDCMLQ---RGFRDQVMQIFRAISLPQI--LMYSATISQEVEKMXXXXXXXXXXXXXG 345
             DE D + +    GFRDQ+  IF A + P++   M+SAT + +VE+              G
Sbjct:   319 DESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNIVSVSIG 378

Query:   346 KPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTT 405
               N   + V+Q  ++V S   K      L+ K+ F PP +V+V S   A  L + + +  
Sbjct:   379 ARNSAVETVEQELLFVGSETGKLLAMRELV-KKGFNPPVLVFVQSIERAKELFHEL-IYE 436

Query:   406 GMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKE 465
             G+    IH E+  ++R   + SF  G++ V++ T +L RG++  GV  VI +D P S  E
Sbjct:   437 GINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVE 496

Query:   466 YVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
             Y+H+IGR  + G+ G A+ F  E++K L + + ++++ +G  +P
Sbjct:   497 YIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQAGCPVP 540


>MGI|MGI:1920185 [details] [associations]
            symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0035458 "cellular response to
            interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
            response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
            GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
            KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
            RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
            SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
            PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
            KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
            CleanEx:MM_DDX41 Genevestigator:Q91VN6
            GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
        Length = 622

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 131/412 (31%), Positives = 222/412 (53%)

Query:   108 SLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             S++  + + +RK+  I V+GD +P PI SF        +L+ ++  G   PTP+Q+Q IP
Sbjct:   154 SMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIP 213

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ 225
             + LSG+ ++  A TGSGKT  F +PVI  C     RL  S+ +  P  +++ P+REL  Q
Sbjct:   214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE-GPYGLIICPSRELARQ 272

Query:   226 ----VEEQAKLLGK-GLPF-KTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
                 +E   +LL +   P  + AL +GG ++  Q+  I+ GV ++V TPGRL+DLL K  
Sbjct:   273 THGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKM 332

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXX 338
             + LD  R   LDE D M+  GF   +  IF       Q L++SAT+ ++++         
Sbjct:   333 VSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVK 392

Query:   339 XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLS 398
                   G+    +  V Q    VE  K++ K+  +L   Q   PP +++   +   D + 
Sbjct:   393 PVTINVGRAGAASLDVIQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIH 449

Query:   399 NAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD 458
               + +  G++A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ VI +D
Sbjct:   450 EYL-LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 508

Query:   459 MPNSIKEYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
             MP  I+ YVH+IGR  + G+ G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   509 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>UNIPROTKB|I3LJA0 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
            EMBL:FP565631 EMBL:FP312903 Ensembl:ENSSSCT00000024730
            Uniprot:I3LJA0
        Length = 507

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 140/426 (32%), Positives = 229/426 (53%)

Query:    98 RESDENSG-FQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCS----LSQKLLQNIEA 152
             RE    SG  + L   + +  R + +I+V+G  +P PI +F        +S +LLQNI  
Sbjct:    31 REKKLTSGKLEELRKEKINFFRNKHKIHVQGTDLPDPITTFQQLDQEYKISSRLLQNILD 90

Query:   153 AGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPL 212
             AG+ +PTP+QMQAIP  L G+ LL SA TGSGKT +F +P++ Q     L    N K   
Sbjct:    91 AGFQLPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQ-----LKQPTN-KGFR 144

Query:   213 AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY-RIQQGVELIVGTPGRL 271
             A+V++PTREL  Q+  +   + +G  F+  ++      A++   +  +  +++V TP RL
Sbjct:   145 ALVISPTRELASQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRL 204

Query:   272 IDLLMKHD---IELDDIRMFVLDEVDCMLQ---RGFRDQVMQIFRAISLPQI--LMYSAT 323
             I LL K D   I+L  +   V+DE D + +    GFRDQ+  IF A +  ++   M+SAT
Sbjct:   205 IYLL-KQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSAT 263

Query:   324 ISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPP 383
              + +VE+              G  N   + V+Q  ++V S   K      L+ K+ F PP
Sbjct:   264 FAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELV-KKGFNPP 322

Query:   384 AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILG 443
              +V+V S   A  L + + +  G+    IH ++  ++R   + SF  G++ V++ T +L 
Sbjct:   323 VLVFVQSIERAKELFHEL-IYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLA 381

Query:   444 RGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKS 503
             RG++  GV  VI +D P S  EY+H+IGR  + G +G A+ F  E++K L + + ++++ 
Sbjct:   382 RGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQ 441

Query:   504 SGAGIP 509
             +G  +P
Sbjct:   442 AGCPVP 447


>RGD|1559513 [details] [associations]
            symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
            IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
            NextBio:667517 Uniprot:D4ADJ9
        Length = 621

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 131/412 (31%), Positives = 222/412 (53%)

Query:   108 SLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             S++  + + +RK+  I V+GD +P PI SF    L   +L+ ++  G   PTP+Q+Q IP
Sbjct:   153 SMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIP 212

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ 225
             + LSG+ ++  A TGSGKT  F +PVI  C     RL  S+ +  P  +++ P+REL  Q
Sbjct:   213 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKRE-GPYGLIICPSRELARQ 271

Query:   226 ----VEEQAKLLGK-GLPF-KTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD 279
                 +E   +LL +   P    AL +GG ++  Q+  ++ GV ++V TPGRL+DLL K  
Sbjct:   272 THGILEYYCRLLQEDSSPLLHCALCIGGVSLKEQMETMRHGVHIMVATPGRLMDLLQKKM 331

Query:   280 IELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXX 338
             + LD  R   LDE D M+  GF   +  IF       Q L++SAT+ ++++         
Sbjct:   332 VSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVK 391

Query:   339 XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLS 398
                   G+    +  V Q    VE  K++ K+  +L   Q   PP +++   +   D + 
Sbjct:   392 PVTINVGRAGAASLDVIQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAKKKADVDAIH 448

Query:   399 NAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD 458
               + +  G++A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ VI +D
Sbjct:   449 EYL-LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 507

Query:   459 MPNSIKEYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
             MP  I+ YVH+IGR  + G+ G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   508 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 559


>ASPGD|ASPL0000055571 [details] [associations]
            symbol:AN1266 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
            EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
            OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
            RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
            EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
            Uniprot:Q5BDW4
        Length = 1173

 Score = 546 (197.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
 Identities = 130/433 (30%), Positives = 226/433 (52%)

Query:    95 FYVRESDENSGFQSLTIGQTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAA 153
             FY   SD       ++  +  +LR  L+ I V+G  VP P+  +S C L  + L  I+  
Sbjct:   504 FYTEPSD----LAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKL 559

Query:   154 GYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLA 213
             G+   T +Q QAIP+ +SG+ ++  A TGSGKT +FL+P+     + R    +N + P+ 
Sbjct:   560 GFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQR--PLENMEGPIG 617

Query:   214 MVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLID 273
             +++TPTREL  Q+ +  K   K L  +     GG  +  Q+  +++G E+IV TPGR+ID
Sbjct:   618 LIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMID 677

Query:   274 LLMKHDIELDDIRMF---VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVE 329
             LL  +   + ++R     VLDE D M   GF  QVM+I   +    Q +++SAT  + +E
Sbjct:   678 LLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFPRNME 737

Query:   330 KMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDIL----MSKQHFTPPAV 385
              +             G  ++    + Q+       KK  +L ++L     + ++    ++
Sbjct:   738 ALARKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELLGNLYSTDENEDARSL 797

Query:   386 VYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRG 445
             ++V  +  AD L   + +  G   +SIHG K   +R   +  F  G  PV++AT +  RG
Sbjct:   798 IFVDRQEAADTLLREL-MRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARG 856

Query:   446 VELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSG 505
             +++  ++ V+ +D PN +++YVH+ GR  + G+ GTA+ F+ E+ +    ++   LK SG
Sbjct:   857 LDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSG 916

Query:   506 AGIP---RELINS 515
               +P   ++L++S
Sbjct:   917 QEVPEAVQKLVDS 929

 Score = 40 (19.1 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
 Identities = 7/26 (26%), Positives = 18/26 (69%)

Query:    97 VRESDENSGFQSLTIGQTDSLRKRLE 122
             V +++++   ++L  G+ +S R++LE
Sbjct:   312 VADNEKSIATKTLGFGEEESTRRKLE 337


>UNIPROTKB|F1P0H1 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
            IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
            Uniprot:F1P0H1
        Length = 703

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 127/427 (29%), Positives = 215/427 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY    DE+    SLT  Q   LR +L + V G A P P  SF+     ++L+ 
Sbjct:   206 PPFEKNFY----DEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 261

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208
              I  + Y  PTP+Q Q +P A+SG+ ++  A TGSGKTA+F+ P++    + +    +  
Sbjct:   262 QIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK--ELEPG 319

Query:   209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268
               P+A+++ PTRELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TP
Sbjct:   320 DGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 379

Query:   269 GRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQE 327
             GRLID + K    L  +   V DE D M   GF  QV  I   +    Q L++SAT  ++
Sbjct:   380 GRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 439

Query:   328 VEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVY 387
             +EK+             G     N+ V Q+     S   K       + +   +   +++
Sbjct:   440 IEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLF 499

Query:   388 VGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447
             V  +  A+ L+N +        L +HG+    ER +++  F    +P++VAT +  RG++
Sbjct:   500 VTKKANAEELANNLKQEDHNLGL-LHGDMDQSERNKVISEFKKKGIPILVATDVAARGLD 558

Query:   448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507
             +  ++ VI +D+   I  + H+IGR  + G++G A   +  ++ N   +LV  L+ +   
Sbjct:   559 IPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQH 618

Query:   508 IPRELIN 514
             + +EL++
Sbjct:   619 VSKELLD 625


>ZFIN|ZDB-GENE-990415-272 [details] [associations]
            symbol:vasa "vasa homolog" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
            EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
            ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
            GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
            NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
        Length = 716

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 129/421 (30%), Positives = 219/421 (52%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             +E+S F     G        + ++V G   P  I++F    L   L +N+  +GY  PTP
Sbjct:   243 EESSIFSHYATGINFDKYDDILVDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTP 302

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQK--NPLAMVLTP 218
             VQ   IP   +G+ L+  A TGSGKTA+FL+P++ +     +  S+  +   P A+++ P
Sbjct:   303 VQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQRFMTDGVAASKFSEIQEPEAIIVAP 362

Query:   219 TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             TREL  Q+  +A+    G   +  +V GG      +  + +G  ++  TPGRL DL+ + 
Sbjct:   363 TRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRG 422

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXX 333
              I L  +R  VLDE D ML  GF  ++ ++  +  +P     Q LM+SAT  +++++M  
Sbjct:   423 KIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAA 482

Query:   334 XXXXXXXXXXX-GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                         G        V+Q  + V+   K+ +L ++L +  +     +V+V ++ 
Sbjct:   483 DFLKVDYIFLAVGVVGGACSDVEQTVVQVDQYSKRDQLLELLRATGN--ERTMVFVETKR 540

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              AD ++  +     +   SIHG++  +ER + +  F +G  PV+VAT +  RG+++  V+
Sbjct:   541 SADFIATFLCQEK-ISTTSIHGDREQREREKALSDFRLGHCPVLVATSVAARGLDIEQVQ 599

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN-LFQELVDILKSSGAGIPRE 511
              V+ FDMP+SI EYVH+IGR  + G+ G A+ F N E+   L + LV +L  +   +P+ 
Sbjct:   600 HVVNFDMPSSIDEYVHRIGRTGRCGNTGRAVSFFNPESDTPLARSLVKVLSGAQQVVPKW 659

Query:   512 L 512
             L
Sbjct:   660 L 660


>UNIPROTKB|E1C4M1 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
            EMBL:AADN02025730 IPI:IPI00593921 ProteinModelPortal:E1C4M1
            Ensembl:ENSGALT00000008815 ArrayExpress:E1C4M1 Uniprot:E1C4M1
        Length = 604

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 134/406 (33%), Positives = 219/406 (53%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCS----LSQKLLQNIEAAGYDMPTPVQMQAIPSALSGK 173
             R +  INV+G  +P PI +F        +  K+++NI+AAG+ +PTP+QMQAIP  L G+
Sbjct:   138 RNQHRINVQGTDLPDPIATFDQLQKEYKIHPKVIENIQAAGFQVPTPIQMQAIPVMLHGR 197

Query:   174 SLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLL 233
              LL SA TGSGKT +F +P+++      L    N K   A++++PTREL  Q   +   L
Sbjct:   198 ELLASAPTGSGKTLAFCIPLLTH-----LKQPMN-KGFRALIISPTRELASQTHRELVKL 251

Query:   234 GKGLPFKTALVVGGDAMARQV--YRIQQGVELIVGTPGRLIDLLMKHD---IELDDIRMF 288
               G  F+  ++      A++      ++ V+++V TP RLI LL K D   I+L  +   
Sbjct:   252 ADGTGFRIHMIQKASEAAKKFGPKSSRKFVDILVTTPNRLIYLL-KQDPPAIDLTSVEWL 310

Query:   289 VLDEVDCMLQ---RGFRDQVMQIFRAISLPQI--LMYSATISQEVEKMXXXXXXXXXXXX 343
             V+DE D + +    GFRDQ+  IF A +   +    +SAT + +VE+             
Sbjct:   311 VVDESDKLFEDGKSGFRDQLASIFLACTSHVVRRAFFSATFAHDVEEWCKLNLDSIVLVS 370

Query:   344 XGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISV 403
              G  N   + V+Q  ++V S   K      L+ K+ F PP +V+V S   A  L + + +
Sbjct:   371 VGARNSAAETVEQELLFVGSETGKLTAMRELV-KKGFAPPVLVFVQSIERAKELFHEL-I 428

Query:   404 TTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSI 463
               G+    IH +K  ++R  ++ SF  G++ V++ T +L RG++  GV  VI +D+P S 
Sbjct:   429 YEGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVINYDLPTSA 488

Query:   464 KEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
              EY+H+IGR  + G  G A+ F  E++K L + + ++++ +G  +P
Sbjct:   489 VEYIHRIGRTGRAGHTGKAVTFFTEDDKPLLRSIANVIQRAGCPVP 534


>ZFIN|ZDB-GENE-080204-77 [details] [associations]
            symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
            EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
            Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
        Length = 719

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 134/433 (30%), Positives = 225/433 (51%)

Query:    88 LPATDECFYVR-ESDENSGFQSLTIGQTDSLRKRLEINVKGD--AVPAPILSFSSCSLSQ 144
             LP   + FY+  +S      + + I + ++    ++    GD   +P P+ +F       
Sbjct:   227 LPVLKKNFYIEAKSVAARSAEEVKIWRKENNNIFVDDLKDGDKRTIPNPVCTFEEAFAHY 286

Query:   145 K-LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLH 203
               +++NI   G+  PTP+Q QA P  L+G  L+  A TG+GKT ++L+P         + 
Sbjct:   287 PGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGFIHMDGQPMP 346

Query:   204 HSQNQKNPLAMVLTPTRELCIQVEEQA-KLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
               + +  P  +VLTPTREL +Q+E +  K   KG  FK+  + GG     Q+  +  GV+
Sbjct:   347 RDK-RNGPGMLVLTPTRELALQIEAECNKYSYKG--FKSICIYGGGDRNAQIKVVTSGVD 403

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             +++ TPGRL DL M   I L  I   VLDE D ML  GF  Q+M+I   I    Q +M S
Sbjct:   404 IVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMTS 463

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMPN-KAVKQLAIWVESNKKKQKLFDILMSKQHF 380
             AT    V ++             G  ++     V+Q  ++V+ ++KK  +FD +   +  
Sbjct:   464 ATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDFIHRMEPL 523

Query:   381 TPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATG 440
                 +++VG +L AD LS+ + +  G+   S+HG++   +R E ++ F  G V ++VAT 
Sbjct:   524 DK-VLIFVGKKLKADDLSSDLCLQ-GIAVQSLHGDREQCDREEALQDFKDGRVRILVATD 581

Query:   441 ILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDI 500
             +  RG+++  +  V  +D P +++EYVH++GR  + G  G ++  V  E+  +  EL+ I
Sbjct:   582 LASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTREDWRVAAELITI 641

Query:   501 LKSSGAGIPRELI 513
             L+ SG  +P EL+
Sbjct:   642 LERSGQDVPEELV 654


>UNIPROTKB|F1NQA6 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 EMBL:AADN02025730
            IPI:IPI00822952 Ensembl:ENSGALT00000039070 ArrayExpress:F1NQA6
            Uniprot:F1NQA6
        Length = 603

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 133/405 (32%), Positives = 218/405 (53%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCS----LSQKLLQNIEAAGYDMPTPVQMQAIPSALSGK 173
             R +  INV+G  +P PI +F        +  K+++NI+AAG+ +PTP+QMQAIP  L G+
Sbjct:   138 RNQHRINVQGTDLPDPIATFDQLQKEYKIHPKVIENIQAAGFQVPTPIQMQAIPVMLHGR 197

Query:   174 SLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLL 233
              LL SA TGSGKT +F +P+++      L    N K   A++++PTREL  Q   +   L
Sbjct:   198 ELLASAPTGSGKTLAFCIPLLTH-----LKQPMN-KGFRALIISPTRELASQTHRELVKL 251

Query:   234 GKGLPFKTALVVGGDAMARQVY-RIQQGVELIVGTPGRLIDLLMKHD---IELDDIRMFV 289
               G  F+  ++      A++   +  +  +++V TP RLI LL K D   I+L  +   V
Sbjct:   252 ADGTGFRIHMIQKASEAAKKFGPKSSRKFDILVTTPNRLIYLL-KQDPPAIDLTSVEWLV 310

Query:   290 LDEVDCMLQ---RGFRDQVMQIFRAISLPQI--LMYSATISQEVEKMXXXXXXXXXXXXX 344
             +DE D + +    GFRDQ+  IF A +   +    +SAT + +VE+              
Sbjct:   311 VDESDKLFEDGKSGFRDQLASIFLACTSHVVRRAFFSATFAHDVEEWCKLNLDSIVLVSV 370

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             G  N   + V+Q  ++V S   K      L+ K+ F PP +V+V S   A  L + + + 
Sbjct:   371 GARNSAAETVEQELLFVGSETGKLTAMRELV-KKGFAPPVLVFVQSIERAKELFHEL-IY 428

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
              G+    IH +K  ++R  ++ SF  G++ V++ T +L RG++  GV  VI +D+P S  
Sbjct:   429 EGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVINYDLPTSAV 488

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
             EY+H+IGR  + G  G A+ F  E++K L + + ++++ +G  +P
Sbjct:   489 EYIHRIGRTGRAGHTGKAVTFFTEDDKPLLRSIANVIQRAGCPVP 533


>DICTYBASE|DDB_G0283661 [details] [associations]
            symbol:ddx3 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
            EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
            SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
            KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
        Length = 712

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 133/402 (33%), Positives = 203/402 (50%)

Query:   122 EINVK-GDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             +I+++  + + AP+ SF+   L   LL NI+ A Y  PTPVQ  A+P  L  + L+  A 
Sbjct:   233 DISIETSEHICAPLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQ 292

Query:   181 TGSGKTASFLVPVIS--------QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232
             TGSGKTA+FL P+IS        +              P A+VL PTREL  Q+ ++A  
Sbjct:   293 TGSGKTAAFLFPIISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANK 352

Query:   233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292
                G P  + ++ GG  +  Q+  + +G +++V T GRL+DLLM+  + L  I+  VLDE
Sbjct:   353 FSYGSPVSSVVIYGGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDE 412

Query:   293 VDCMLQRGFRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
              D ML  GF  Q+ QI     +P     Q LM+SAT  ++++ +             G  
Sbjct:   413 ADRMLDMGFEPQIRQIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVV 472

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
                    +++   VE +K    L D L   +      +++V ++   D L+  ++     
Sbjct:   473 GTTQNITQRIEYVVEEDKNSY-LLDYLSGLKS-DGLCLIFVETKRSCDTLTYFLN-QRNF 529

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
                 IHG+    ER   ++SF     P +VAT I  RG+ +  V  VI FD+P  I  YV
Sbjct:   530 PTTCIHGDLTQPERENALQSFRSFATPFLVATDIASRGLHIGNVNLVINFDLPTDIHIYV 589

Query:   468 HQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
             H+IGR  + G +G AI F NE+NK +  EL+ ++K+S   IP
Sbjct:   590 HRIGRTGRAGKKGLAISFFNEKNKPVGAELLKLMKASNQDIP 631


>UNIPROTKB|E2RB54 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:ERESINT
            EMBL:AAEX03006616 Ensembl:ENSCAFT00000028820 Uniprot:E2RB54
        Length = 601

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 138/426 (32%), Positives = 230/426 (53%)

Query:    98 RESDENSG-FQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCS----LSQKLLQNIEA 152
             RE+   SG  ++L   + +  R + +I+V+G  +P PI +F        ++ +LLQNI  
Sbjct:   125 RENKLTSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILD 184

Query:   153 AGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPL 212
             AG+  PTP+QMQAIP  L G+ LL SA TGSGKT +F +P++ Q     L    N K   
Sbjct:   185 AGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQ-----LKQPTN-KGFR 238

Query:   213 AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY-RIQQGVELIVGTPGRL 271
             A++++PTREL  Q+  +   + +G  F+  ++      A++   +  +  +++V TP RL
Sbjct:   239 ALIISPTRELANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRL 298

Query:   272 IDLLMKHD---IELDDIRMFVLDEVDCMLQ---RGFRDQVMQIFRAISLPQI--LMYSAT 323
             I LL K D   I+L  +   V+DE D + +    GFRDQ+  IF A +  ++   M+SAT
Sbjct:   299 IYLL-KQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSAT 357

Query:   324 ISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPP 383
              + +VE+              G  N   + V+Q  ++V S   K      L+ K+ F PP
Sbjct:   358 FAYDVEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELV-KKGFNPP 416

Query:   384 AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILG 443
              +V+V S   A  L + + +  G+    IH ++  ++R   + SF  G++ V++ T +L 
Sbjct:   417 VLVFVQSIERAKELFHEL-IYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLA 475

Query:   444 RGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKS 503
             RG++  GV  VI +D P S  EY+H+IGR  + G +G A+ F  E++K L + + ++++ 
Sbjct:   476 RGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQ 535

Query:   504 SGAGIP 509
             +G  +P
Sbjct:   536 AGCPVP 541


>UNIPROTKB|B2C6E9 [details] [associations]
            symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
            [GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
        Length = 704

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 131/398 (32%), Positives = 208/398 (52%)

Query:   123 INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTG 182
             + V G   P  IL+F    L Q L  +I  AGY   TPVQ   IP  L+G+ L+  A TG
Sbjct:   254 VEVSGHDAPPAILTFEETDLCQTLNNDITKAGYTKLTPVQKYGIPIILAGRDLMACAQTG 313

Query:   183 SGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFK 240
             SGKTA+FL+P+++      +     ++Q+ P  +++ PTREL  Q+  +A+    G   +
Sbjct:   314 SGKTAAFLLPILAHMMRDGVTASRFKDQQEPECIIVAPTRELINQIFLEARKFSFGTCVR 373

Query:   241 TALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRG 300
               ++ GG  +   + +I QG  ++  TPGRL+D++ K  I L  IR  VLDE D ML  G
Sbjct:   374 PVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKEKIGLGQIRYLVLDEADRMLDMG 433

Query:   301 FRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXX---XXGKPNMPNK 352
             F  ++ ++     +P     Q LM+SAT  +   K                 G+      
Sbjct:   434 FGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWAGEFLKNLTICLVAVGQVGGACS 493

Query:   353 AVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSI 412
              V+Q  + V    K++KL +IL +        +V+V ++  AD ++  +     +   SI
Sbjct:   494 DVQQTVLQVGQYSKREKLVEILRNIGE--ERTMVFVETKKKADFIATFLCQEK-ISTTSI 550

Query:   413 HGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGR 472
             HG++  +ER + +  F  G+ PV+VAT +  RG+++  V+ VI FD+P++I EYVH+IGR
Sbjct:   551 HGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGR 610

Query:   473 ASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
               + G+ G AI F + E + +L Q LV +L  +  G P
Sbjct:   611 TGRCGNTGKAISFFDPEPDSHLAQPLVKVLSDAQQGCP 648


>RGD|1359520 [details] [associations]
            symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 RGD:1359520 GO:GO:0005524
            GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
            HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
            IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
            UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
            SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
            Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
            UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
            Genevestigator:Q66HG7 Uniprot:Q66HG7
        Length = 589

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 130/314 (41%), Positives = 187/314 (59%)

Query:    14 GVDDS---QSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCRV 70
             GV DS   +  VK +SK QR   P EP CV+CGRYGEYICD+TD+DVCSLECK K L +V
Sbjct:    80 GVKDSHPSEEPVKSFSKTQRWPEPGEPVCVVCGRYGEYICDKTDEDVCSLECKAKHLLQV 139

Query:    71 ANANRGMRXXXXXXXERLPATD-ECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDA 129
                   ++          P +  + FYV +  E+    +L   Q ++L+++L I+V+G  
Sbjct:   140 KEEEGSLKPSSPQGAASEPESPLDAFYVYK--EHPFIVALRDDQIETLKQQLGISVQGQE 197

Query:   130 VPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASF 189
             V  PI+ F  C   + L QN++ +GY++PTP+QMQ IP  L G+ +L SA+TGSGKTA+F
Sbjct:   198 VARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAF 257

Query:   190 LVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGD 248
             L+PVI     IR       K P A++LTPTREL IQ+E QAK L +GLP  KT L+VGG 
Sbjct:   258 LLPVI-----IRA--LPEDKTPSALILTPTRELAIQIERQAKELMRGLPRMKTVLLVGGL 310

Query:   249 AMARQVYRIQQGVE----LIVGTPGRLIDLLMKH---DIELDDIRMFVLDEVDCMLQRGF 301
              +  Q+YR+QQ V+    L +G   +++D+L +H   D +   +   + D +D +  +  
Sbjct:   311 PLPPQLYRLQQHVKADTMLKMGFQQQVLDVL-EHTPSDCQTVLVSATIPDSIDQLADQLL 369

Query:   302 RDQVMQIFRAISLP 315
              + V  +    +LP
Sbjct:   370 HNPVRIVTGDKNLP 383

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 108/272 (39%), Positives = 169/272 (62%)

Query:   250 MARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE---VDCMLQRGFRDQVM 306
             +A Q+ R  Q  EL+ G P R+  +L+   + L   +++ L +    D ML+ GF+ QV+
Sbjct:   283 LAIQIER--QAKELMRGLP-RMKTVLLVGGLPLPP-QLYRLQQHVKADTMLKMGFQQQVL 338

Query:   307 QIFRAI-SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNK 365
              +     S  Q ++ SATI   ++++             G  N+P  +V+Q+ +WVE   
Sbjct:   339 DVLEHTPSDCQTVLVSATIPDSIDQLADQLLHNPVRIVTGDKNLPCSSVRQIILWVEDPA 398

Query:   366 KKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIM 425
             KK+KLF+IL  ++ F PP +V+V  +LGADLLS A+   TG+ + SIH EK   ERREI+
Sbjct:   399 KKKKLFEILNDQKLFKPPVLVFVDCKLGADLLSEAVQKITGLSSTSIHSEKSQVERREIL 458

Query:   426 RSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVF 485
             +  L G+  V+V+TGILGRG++L+ V+ V+ FDMP+S+ EYVHQ+GR  ++G  GTAI F
Sbjct:   459 KGLLEGDYEVVVSTGILGRGLDLVNVKLVVNFDMPSSLDEYVHQVGRVGRLGQNGTAITF 518

Query:   486 VNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             +N  +K LF ++   +K +G+ +P +L+NS Y
Sbjct:   519 INNNSKRLFWDVAKRVKPTGSILPPQLLNSPY 550


>UNIPROTKB|Q66HG7 [details] [associations]
            symbol:Ddx59 "Probable ATP-dependent RNA helicase DDX59"
            species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1359520
            GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
            PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
            HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
            IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
            UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
            SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
            Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
            UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
            Genevestigator:Q66HG7 Uniprot:Q66HG7
        Length = 589

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 130/314 (41%), Positives = 187/314 (59%)

Query:    14 GVDDS---QSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDDVCSLECKQKLLCRV 70
             GV DS   +  VK +SK QR   P EP CV+CGRYGEYICD+TD+DVCSLECK K L +V
Sbjct:    80 GVKDSHPSEEPVKSFSKTQRWPEPGEPVCVVCGRYGEYICDKTDEDVCSLECKAKHLLQV 139

Query:    71 ANANRGMRXXXXXXXERLPATD-ECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDA 129
                   ++          P +  + FYV +  E+    +L   Q ++L+++L I+V+G  
Sbjct:   140 KEEEGSLKPSSPQGAASEPESPLDAFYVYK--EHPFIVALRDDQIETLKQQLGISVQGQE 197

Query:   130 VPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASF 189
             V  PI+ F  C   + L QN++ +GY++PTP+QMQ IP  L G+ +L SA+TGSGKTA+F
Sbjct:   198 VARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAF 257

Query:   190 LVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGD 248
             L+PVI     IR       K P A++LTPTREL IQ+E QAK L +GLP  KT L+VGG 
Sbjct:   258 LLPVI-----IRA--LPEDKTPSALILTPTRELAIQIERQAKELMRGLPRMKTVLLVGGL 310

Query:   249 AMARQVYRIQQGVE----LIVGTPGRLIDLLMKH---DIELDDIRMFVLDEVDCMLQRGF 301
              +  Q+YR+QQ V+    L +G   +++D+L +H   D +   +   + D +D +  +  
Sbjct:   311 PLPPQLYRLQQHVKADTMLKMGFQQQVLDVL-EHTPSDCQTVLVSATIPDSIDQLADQLL 369

Query:   302 RDQVMQIFRAISLP 315
              + V  +    +LP
Sbjct:   370 HNPVRIVTGDKNLP 383

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 108/272 (39%), Positives = 169/272 (62%)

Query:   250 MARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE---VDCMLQRGFRDQVM 306
             +A Q+ R  Q  EL+ G P R+  +L+   + L   +++ L +    D ML+ GF+ QV+
Sbjct:   283 LAIQIER--QAKELMRGLP-RMKTVLLVGGLPLPP-QLYRLQQHVKADTMLKMGFQQQVL 338

Query:   307 QIFRAI-SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNK 365
              +     S  Q ++ SATI   ++++             G  N+P  +V+Q+ +WVE   
Sbjct:   339 DVLEHTPSDCQTVLVSATIPDSIDQLADQLLHNPVRIVTGDKNLPCSSVRQIILWVEDPA 398

Query:   366 KKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIM 425
             KK+KLF+IL  ++ F PP +V+V  +LGADLLS A+   TG+ + SIH EK   ERREI+
Sbjct:   399 KKKKLFEILNDQKLFKPPVLVFVDCKLGADLLSEAVQKITGLSSTSIHSEKSQVERREIL 458

Query:   426 RSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVF 485
             +  L G+  V+V+TGILGRG++L+ V+ V+ FDMP+S+ EYVHQ+GR  ++G  GTAI F
Sbjct:   459 KGLLEGDYEVVVSTGILGRGLDLVNVKLVVNFDMPSSLDEYVHQVGRVGRLGQNGTAITF 518

Query:   486 VNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             +N  +K LF ++   +K +G+ +P +L+NS Y
Sbjct:   519 INNNSKRLFWDVAKRVKPTGSILPPQLLNSPY 550


>ZFIN|ZDB-GENE-030131-18 [details] [associations]
            symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
            UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
            KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
            Uniprot:F1QBS1
        Length = 671

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 136/437 (31%), Positives = 224/437 (51%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             ++LP  ++ FY    +EN     ++    +  R++ EI V+G   P P+ +F      Q 
Sbjct:    50 DQLPKFEKNFY----NENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFPQY 105

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  +    +  PT +Q Q  P ALSG+ ++  A TGSGKT ++L+P I     + ++H 
Sbjct:   106 VMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI-----VHINHQ 160

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A   GK    K+  V GG     Q+  +++GVE
Sbjct:   161 PYLERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVE 220

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   221 ICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 280

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKKKQKLF----DILMS 376
             AT  +EV ++             G   +  N  + Q+      N+K  KL     +I+  
Sbjct:   281 ATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAE 340

Query:   377 KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVI 436
             K++ T   +++V ++   D L+  +    G  A+ IHG+K   ER  ++  F  G+ P++
Sbjct:   341 KENKT---IIFVETKKRCDELTRRMR-RDGWPAMCIHGDKSQPERDWVLTEFRSGKAPIL 396

Query:   437 VATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQE 496
             +AT +  RG+++  V+ VI +D PNS ++YVH+IGR ++  ++GTA  F    N    ++
Sbjct:   397 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 456

Query:   497 LVDILKSSGAGIPRELI 513
             LV +L+ +   I  +L+
Sbjct:   457 LVRVLEEARQAINPKLL 473


>UNIPROTKB|A4RN46 [details] [associations]
            symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
            PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
            "mycelium development" evidence=IEP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
            ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
            KEGG:mgr:MGG_15532 Uniprot:A4RN46
        Length = 1012

 Score = 549 (198.3 bits), Expect = 3.9e-52, P = 3.9e-52
 Identities = 128/415 (30%), Positives = 218/415 (52%)

Query:   109 LTIGQTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             +T  +   LR  L+ I V G  VP P+  +S C L++ +L  I    YD PT +QMQA+P
Sbjct:   351 MTEAEVAELRLELDGIKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALP 410

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVE 227
               +SG+ ++  A TGSGKT +FL+P+     +      ++ + P+ ++LTPTREL +Q+ 
Sbjct:   411 VIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKD--QEPVKDNEGPIGLILTPTRELAVQIF 468

Query:   228 EQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRM 287
                K   K L  +     GG  +  Q+  +++G E++V T GR+IDLL  +   +  +R 
Sbjct:   469 RDCKPFLKTLGLRAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRR 528

Query:   288 ---FVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXX 343
                 VLDE D M   GF  QVM+IF  +    Q +++SAT+ + ++ +            
Sbjct:   529 TTYIVLDEADRMFDMGFEPQVMKIFANVRPDRQTVLFSATMPKIMDALVKKVLKNPVEIE 588

Query:   344 XGKPNMPNKAVKQLAIWVESNKKKQKLFDIL--MSKQHFTPPAVVYVGSRLGADLLSNAI 401
              G  ++    + Q+    +   K  +L ++L  + K      ++++V  +  AD L   +
Sbjct:   589 VGGKSVVASEITQIVEIRDEKSKFNRLLELLGELYKDDDDVRSLIFVERQEKADELLREL 648

Query:   402 SVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPN 461
              +  G   +S+HG K   +R   +  F  G  PV++AT +  RG+++  ++ V+ +D PN
Sbjct:   649 -LRKGYGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNYDAPN 707

Query:   462 SIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSR 516
              +++YVH+ GR  + G+ GTA+ FV EE +N    +   L+ SG  +P +LI  R
Sbjct:   708 HLEDYVHRAGRTGRAGNTGTAVTFVTEEQENCAIGIAKALEQSGQPVPEKLIEMR 762


>UNIPROTKB|E2RFF1 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
            Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
        Length = 933

 Score = 547 (197.6 bits), Expect = 4.6e-52, P = 4.6e-52
 Identities = 127/427 (29%), Positives = 217/427 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY    +E+    +LT  Q   LR +L + V G A P P  SF+     ++L+ 
Sbjct:   211 PPFEKNFY----NEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208
              I  + Y  PTP+Q Q +P ALSG+ ++  A TGSGKTA+F+ P++    + +    +  
Sbjct:   267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK--ELEPG 324

Query:   209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268
               P+A+++ PTRELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TP
Sbjct:   325 DGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 384

Query:   269 GRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQE 327
             GRLID + K    L  +   V DE D M   GF  QV  I   +    Q L++SAT  ++
Sbjct:   385 GRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 444

Query:   328 VEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVY 387
             +EK+             G     N+ V Q+   + S   K       + +   +   +++
Sbjct:   445 IEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLF 504

Query:   388 VGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447
             V  +  A+ L+N +    G     +HG+    ER +++  F   ++PV+VAT +  RG++
Sbjct:   505 VTKKANAEELANNLK-QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLD 563

Query:   448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507
             +  ++ VI +D+   I  + H+IGR  + G++G A   +  ++ N   +LV  L+ +   
Sbjct:   564 IPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQH 623

Query:   508 IPRELIN 514
             + +EL++
Sbjct:   624 VSKELLD 630


>UNIPROTKB|Q86XP3 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
            evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
            localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
            EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
            OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
            EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
            EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
            PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
            ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
            MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
            PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
            Ensembl:ENST00000389924 Ensembl:ENST00000457800
            Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
            KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
            HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
            MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
            InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
            NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
            Genevestigator:Q86XP3 Uniprot:Q86XP3
        Length = 938

 Score = 547 (197.6 bits), Expect = 4.7e-52, P = 4.7e-52
 Identities = 127/427 (29%), Positives = 217/427 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY    +E+    +LT  Q   LR +L + V G A P P  SF+     ++L+ 
Sbjct:   211 PPFEKNFY----NEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208
              I  + Y  PTP+Q Q +P ALSG+ ++  A TGSGKTA+F+ P++    + +    +  
Sbjct:   267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK--ELEPG 324

Query:   209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268
               P+A+++ PTRELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TP
Sbjct:   325 DGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 384

Query:   269 GRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQE 327
             GRLID + K    L  +   V DE D M   GF  QV  I   +    Q L++SAT  ++
Sbjct:   385 GRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 444

Query:   328 VEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVY 387
             +EK+             G     N+ V Q+   + S   K       + +   +   +++
Sbjct:   445 IEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLF 504

Query:   388 VGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447
             V  +  A+ L+N +    G     +HG+    ER +++  F   ++PV+VAT +  RG++
Sbjct:   505 VTKKANAEELANNLK-QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLD 563

Query:   448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507
             +  ++ VI +D+   I  + H+IGR  + G++G A   +  ++ N   +LV  L+ +   
Sbjct:   564 IPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQH 623

Query:   508 IPRELIN 514
             + +EL++
Sbjct:   624 VSKELLD 630


>UNIPROTKB|Q5R7D1 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
            localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
            GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
            RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
            GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
        Length = 942

 Score = 547 (197.6 bits), Expect = 4.8e-52, P = 4.8e-52
 Identities = 127/427 (29%), Positives = 217/427 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY    +E+    +LT  Q   LR +L + V G A P P  SF+     ++L+ 
Sbjct:   211 PPFEKNFY----NEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208
              I  + Y  PTP+Q Q +P ALSG+ ++  A TGSGKTA+F+ P++    + +    +  
Sbjct:   267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK--ELEPG 324

Query:   209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268
               P+A+++ PTRELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TP
Sbjct:   325 DGPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 384

Query:   269 GRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQE 327
             GRLID + K    L  +   V DE D M   GF  QV  I   +    Q L++SAT  ++
Sbjct:   385 GRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 444

Query:   328 VEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVY 387
             +EK+             G     N+ V Q+   + S   K       + +   +   +++
Sbjct:   445 IEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLF 504

Query:   388 VGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447
             V  +  A+ L+N +    G     +HG+    ER +++  F   ++PV+VAT +  RG++
Sbjct:   505 VTKKANAEELANNLK-QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLD 563

Query:   448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507
             +  ++ VI +D+   I  + H+IGR  + G++G A   +  ++ N   +LV  L+ +   
Sbjct:   564 IPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQH 623

Query:   508 IPRELIN 514
             + +EL++
Sbjct:   624 VSKELLD 630


>UNIPROTKB|E1BJD2 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
            Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
        Length = 946

 Score = 547 (197.6 bits), Expect = 4.9e-52, P = 4.9e-52
 Identities = 132/429 (30%), Positives = 218/429 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY    +E+    +LT  Q   LR +L + V G A P P  SF+     ++L+ 
Sbjct:   211 PPFEKNFY----NEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208
              I  + Y  PTP+Q Q +P ALSG+ ++  A TGSGKTA+F+ P++    + +    +  
Sbjct:   267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK--ELEPG 324

Query:   209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268
               P+A+++ PTRELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TP
Sbjct:   325 DGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 384

Query:   269 GRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQE 327
             GRLID + K    L  +   V DE D M   GF  QV  I   +    Q L++SAT  ++
Sbjct:   385 GRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 444

Query:   328 VEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVV- 386
             +EK+             G     N+ V Q+   + S  K   L   L+    FT    V 
Sbjct:   445 IEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGSKWNWLTRRLVE---FTSSGSVL 501

Query:   387 -YVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRG 445
              +V  +  A+ L+N +    G     +HG+    ER +++  F   ++PV+VAT +  RG
Sbjct:   502 LFVTKKANAEELANNLK-QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARG 560

Query:   446 VELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSG 505
             +++  ++ VI +D+   I  + H+IGR  + G++G A   +  ++ N   +LV  L+ + 
Sbjct:   561 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGAN 620

Query:   506 AGIPRELIN 514
               + +EL++
Sbjct:   621 QHVSKELLD 629


>FB|FBgn0030631 [details] [associations]
            symbol:CG6227 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
            RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
            EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
            UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
            Uniprot:Q9VXW2
        Length = 1224

 Score = 550 (198.7 bits), Expect = 5.5e-52, P = 5.5e-52
 Identities = 124/409 (30%), Positives = 219/409 (53%)

Query:   109 LTIGQTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIP 167
             +T    +  R  LE I VKG   P PI +++ C +S+K ++ +   G++ PTP+Q QAIP
Sbjct:   483 MTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIP 542

Query:   168 SALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVE 227
             + +SG+ L+  A TGSGKT +F++P+     +      ++    +A+++ PTRELC+Q+ 
Sbjct:   543 AIMSGRDLIGIAKTGSGKTLAFILPMFRHILD--QPSMEDGDGAIAIIMAPTRELCMQIG 600

Query:   228 EQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRM 287
             +  +   K L  +   V GG  ++ Q+  +++G E+IV TPGR+ID+L  +   + ++R 
Sbjct:   601 KDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 660

Query:   288 F---VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXX 343
                 VLDE D M   GF  QVM+I   +    Q +M+SAT  +++E +            
Sbjct:   661 VTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVI 720

Query:   344 XGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISV 403
              G  ++  K V+Q  + +  + K  KL ++L   Q      +V+V  +  AD+L   + +
Sbjct:   721 VGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQE-AGSIIVFVDKQENADILLRDL-M 778

Query:   404 TTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSI 463
                   +S+HG     +R   +  F  G+V +++AT +  RG+++  +  V+ +D+PN  
Sbjct:   779 KASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHY 838

Query:   464 KEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
             ++YVH+ GR  + G +G+A  F+  E      +++  +  SG  IP EL
Sbjct:   839 EDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAEL 887


>TIGR_CMR|CPS_1125 [details] [associations]
            symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
            ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
            KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
            BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
        Length = 466

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 116/367 (31%), Positives = 208/367 (56%)

Query:   137 FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 196
             F+   LS+ LL+ +   GY+ P+P+Q QAIP+ +SG+ ++ +A TG+GKTA F +P++ +
Sbjct:     8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67

Query:   197 CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYR 256
              ++ +  +  +  N  A++LTPTREL  Q+ E  ++ GK L   + +V GG  +  Q+ R
Sbjct:    68 LSSSK-GNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIAR 126

Query:   257 IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP- 315
             ++QGV+++V TPGRL+DL  +  ++   + +F+LDE D ML  GF   + ++  A+    
Sbjct:   127 LRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDR 186

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q L++SAT S E+  +                N   + V Q    V+  +K   L  ++ 
Sbjct:   187 QNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKRKPAVLTHLI- 245

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
              K++     +V+  ++ GA+ L+  +    G+ A +IHG K    R + + +F  G V +
Sbjct:   246 -KENNWQQVLVFTKTKHGANKLTKHLEAE-GLTAAAIHGNKSQGARTKALAAFKDGSVKI 303

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT I  RG+++  + QV+ FD+PN  ++YVH+IGR ++ G+ G A+  V  +  +L  
Sbjct:   304 LVATDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALSLVCADELDLLW 363

Query:   496 ELVDILK 502
              +  +++
Sbjct:   364 GIEHVIQ 370


>TAIR|locus:2119176 [details] [associations]
            symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
            IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
            ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
            EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
            GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
            PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
            Uniprot:Q9SZB4
        Length = 542

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 131/413 (31%), Positives = 220/413 (53%)

Query:   107 QSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAI 166
             + ++  Q D +RK+  I V G+ +P PI +F        LL+ ++  G   PTP+Q+Q +
Sbjct:    69 RKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGL 128

Query:   167 PSALSGKSLLVSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTPTRELCI 224
             P  LSG+ ++  A TGSGKT  F++P+I       I +  +  +  P+A+V+ P+REL  
Sbjct:   129 PVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGE-GPIALVICPSRELAK 187

Query:   225 Q---VEEQ--AKLLGKGLP-FKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKH 278
             Q   V EQ  A L+  G P  ++ L +GG  M  Q+  +++GV ++V TPGRL D+L K 
Sbjct:   188 QTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKK 247

Query:   279 DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMXXXXXX 337
              + LD  R+  LDE D ++  GF D +  +F    S  Q L++SAT+  +++        
Sbjct:   248 KMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALV 307

Query:   338 XXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLL 397
                    G+    N  V Q    VE  K++ K+  +L   Q  TPP +++  ++   D +
Sbjct:   308 KPVTVNVGRAGAANLDVIQE---VEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDI 364

Query:   398 SNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIF 457
                + +  G++A++IHG K  ++R   +  F  G+  V+VAT +  +G++   ++ VI +
Sbjct:   365 HEYL-LLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINY 423

Query:   458 DMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL-FQELVDILKSSGAGIP 509
             DMP  I+ YVH+IGR  + G  G A  F+N+    +   +L  +L+ +   IP
Sbjct:   424 DMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIP 476


>RGD|1304909 [details] [associations]
            symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
            evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
            GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
            IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
            Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
            UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
        Length = 929

 Score = 546 (197.3 bits), Expect = 5.8e-52, P = 5.8e-52
 Identities = 127/427 (29%), Positives = 217/427 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY    +E+    +LT  Q   LR +L + V G A P P  SF+     ++L+ 
Sbjct:   211 PPFEKNFY----NEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208
              I  + Y  PTP+Q Q +P ALSG+ ++  A TGSGKTA+F+ P++    + +    +  
Sbjct:   267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK--ELEPG 324

Query:   209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268
               P+A+++ PTRELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TP
Sbjct:   325 DGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 384

Query:   269 GRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQE 327
             GRLID + K    L  +   V DE D M   GF  QV  I   +    Q L++SAT  ++
Sbjct:   385 GRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 444

Query:   328 VEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVY 387
             +EK+             G     N+ V Q+   + S   K       + +   +   +++
Sbjct:   445 IEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLF 504

Query:   388 VGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447
             V  +  A+ L+N +    G     +HG+    ER +++  F   ++PV+VAT +  RG++
Sbjct:   505 VTKKANAEELANNLK-QEGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVATDVAARGLD 563

Query:   448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507
             +  ++ VI +D+   I  + H+IGR  + G++G A   +  ++ N   +LV  L+ +   
Sbjct:   564 IPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQH 623

Query:   508 IPRELIN 514
             + +EL++
Sbjct:   624 VSKELLD 630


>UNIPROTKB|Q5F485 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
            localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
            UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
            GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
            HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
            NextBio:20822943 Uniprot:Q5F485
        Length = 944

 Score = 546 (197.3 bits), Expect = 6.2e-52, P = 6.2e-52
 Identities = 127/427 (29%), Positives = 215/427 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY    DE+    SLT  Q   LR +L + V G A P P  SF+     ++L+ 
Sbjct:   211 PPFEKNFY----DEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMH 266

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208
              I  + Y  PTP+Q Q +P A+SG+ ++  A TGSGKTA+F+ P++    + +    +  
Sbjct:   267 QIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK--ELEPG 324

Query:   209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268
               P+A+++ PTRELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TP
Sbjct:   325 DGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 384

Query:   269 GRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQE 327
             GRLID + K    L  +   V DE D M   GF  QV  I   +    Q L++SAT  ++
Sbjct:   385 GRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 444

Query:   328 VEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVY 387
             +EK+             G     N+ V Q+     S   K       + +   +   +++
Sbjct:   445 IEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLF 504

Query:   388 VGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447
             V  +  A+ L+N +        L +HG+    ER +++  F    +P++VAT +  RG++
Sbjct:   505 VTKKANAEELANNLKQEDHNLGL-LHGDMDQSERNKVISEFKKKGIPILVATDVAARGLD 563

Query:   448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507
             +  ++ VI +D+   I  + H+IGR  + G++G A   +  ++ N   +LV  L+ +   
Sbjct:   564 IPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQH 623

Query:   508 IPRELIN 514
             + +EL++
Sbjct:   624 VSKELLD 630


>UNIPROTKB|F1NJ40 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AADN02056764
            Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
        Length = 946

 Score = 546 (197.3 bits), Expect = 6.3e-52, P = 6.3e-52
 Identities = 127/427 (29%), Positives = 215/427 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY    DE+    SLT  Q   LR +L + V G A P P  SF+     ++L+ 
Sbjct:   213 PPFEKNFY----DEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 268

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208
              I  + Y  PTP+Q Q +P A+SG+ ++  A TGSGKTA+F+ P++    + +    +  
Sbjct:   269 QIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK--ELEPG 326

Query:   209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268
               P+A+++ PTRELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TP
Sbjct:   327 DGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 386

Query:   269 GRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQE 327
             GRLID + K    L  +   V DE D M   GF  QV  I   +    Q L++SAT  ++
Sbjct:   387 GRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 446

Query:   328 VEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVY 387
             +EK+             G     N+ V Q+     S   K       + +   +   +++
Sbjct:   447 IEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLF 506

Query:   388 VGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447
             V  +  A+ L+N +        L +HG+    ER +++  F    +P++VAT +  RG++
Sbjct:   507 VTKKANAEELANNLKQEDHNLGL-LHGDMDQSERNKVISEFKKKGIPILVATDVAARGLD 565

Query:   448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507
             +  ++ VI +D+   I  + H+IGR  + G++G A   +  ++ N   +LV  L+ +   
Sbjct:   566 IPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQH 625

Query:   508 IPRELIN 514
             + +EL++
Sbjct:   626 VSKELLD 632


>UNIPROTKB|P25888 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
            PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
            ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
            MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
            EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
            KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
            EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
            BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
            Genevestigator:P25888 Uniprot:P25888
        Length = 454

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 119/377 (31%), Positives = 213/377 (56%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SF S  LS  +L+ +   GY  PTP+Q QAIP+ L G+ L+ SA TG+GKTA F +P++
Sbjct:     1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
                   R  H++ ++   A++LTPTREL  Q+ E  +   K L  ++ +V GG ++  Q+
Sbjct:    61 QHLIT-RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQM 119

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
              +++ GV+++V TPGRL+DL  ++ ++LD + + VLDE D ML  GF   + ++   +  
Sbjct:   120 MKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA 179

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q L++SAT S +++ +              + N  +  V Q   +V+  K+K++L   
Sbjct:   180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDK-KRKRELLSH 238

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             ++ K ++    +V+  ++ GA+ L+  ++   G+++ +IHG K    R   +  F  G++
Sbjct:   239 MIGKGNWQQ-VLVFTRTKHGANHLAEQLN-KDGIRSAAIHGNKSQGARTRALADFKSGDI 296

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V+VAT I  RG+++  +  V+ +++PN  ++YVH+IGR  +    G A+  V  +   L
Sbjct:   297 RVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKL 356

Query:   494 FQELVDILKSSGAGIPR 510
              +++  +LK     IPR
Sbjct:   357 LRDIEKLLKKE---IPR 370


>UNIPROTKB|A5D7C1 [details] [associations]
            symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
            species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:BC140501 IPI:IPI00692860
            RefSeq:NP_001096708.1 UniGene:Bt.51117 ProteinModelPortal:A5D7C1
            SMR:A5D7C1 PRIDE:A5D7C1 Ensembl:ENSBTAT00000013622 GeneID:510826
            KEGG:bta:510826 CTD:11056 GeneTree:ENSGT00550000074863
            HOGENOM:HOG000242486 HOVERGEN:HBG051332 InParanoid:A5D7C1 KO:K14779
            OMA:NVMKQSG OrthoDB:EOG4XKV6Q NextBio:20869637 ArrayExpress:A5D7C1
            Uniprot:A5D7C1
        Length = 596

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 137/427 (32%), Positives = 229/427 (53%)

Query:    98 RESDENSG-FQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCS----LSQKLLQNIEA 152
             R++   SG  + L   + +  R + +I+V+G  +P PI +F        ++ +LLQNI  
Sbjct:   121 RKNKLTSGKLEQLRKEKLNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILD 180

Query:   153 AGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQ-NQKNP 211
             AG+  PTP+QMQAIP  L G+ LL SA TGSGKT +F +P++       +H  Q   K  
Sbjct:   181 AGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPIL-------MHLKQPTNKGF 233

Query:   212 LAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY-RIQQGVELIVGTPGR 270
              A++++PTREL  Q+  +   L +G  F+  ++      A++   +  +  +++V TP R
Sbjct:   234 RALIISPTRELASQIHRELVKLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNR 293

Query:   271 LIDLLMKHD---IELDDIRMFVLDEVDCMLQ---RGFRDQVMQIFRAISLPQI--LMYSA 322
             LI LL K D   I+L  +   V+DE D + +    GFRDQ+  IF A +  ++   M+SA
Sbjct:   294 LIYLL-KQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSA 352

Query:   323 TISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTP 382
             T + +VE+              G  N   + V+Q  ++V S   K      L+ K+ F P
Sbjct:   353 TFAYDVEQWCRLNLDSVITVSVGARNSAVETVEQELLFVGSETGKLLAMRELV-KKGFNP 411

Query:   383 PAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGIL 442
             P +V+V S   A  L + + +  G+    IH ++  ++R   + SF  G++ V++ T +L
Sbjct:   412 PVLVFVQSIERAKELFHEL-IYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALL 470

Query:   443 GRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILK 502
              RG++  GV  VI +D P S  EY+H+IGR  + G +G A+ F  E++K L + + ++++
Sbjct:   471 ARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQ 530

Query:   503 SSGAGIP 509
              +G  +P
Sbjct:   531 QAGCPVP 537


>UNIPROTKB|Q9NXZ2 [details] [associations]
            symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
            IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
            ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
            PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
            Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
            CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
            HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
            InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
            ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
            Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
            GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
        Length = 648

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 143/441 (32%), Positives = 229/441 (51%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGD--------AVPAPILSFSS 139
             LP   + FY +ES   S    +   + DS RK    N+  D         +P P  +F  
Sbjct:   191 LPPIKKNFY-KESTATSAMSKV---EADSWRKE-NFNITWDDLKDGEKRPIPNPTCTFDD 245

Query:   140 C-SLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCA 198
                   ++++NI+ AG+  PTP+Q QA P  L G  L+  A TG+GKT  +L+P      
Sbjct:   246 AFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGF---I 302

Query:   199 NIRLHHS-QNQKN-PLAMVLTPTRELCIQVE-EQAKLLGKGLPFKTALVVGGDAMARQVY 255
             ++ L  S + Q+N P  +VLTPTREL +QVE E  K   KGL  ++  V GG     Q+ 
Sbjct:   303 HLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGL--RSVCVYGGGNRDEQIE 360

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315
              +++GV++I+ TPGRL DL M + + L +I   VLDE D ML  GF  Q+M+I   +   
Sbjct:   361 ELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPD 420

Query:   316 -QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN-KAVKQLAIWVESNKKKQKLFDI 373
              Q +M SAT    V ++             G  ++    +VKQ  I V + ++K      
Sbjct:   421 RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNII-VTTEEEKWSHMQT 479

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
              +     T   +V+V  +  AD LS+ + +   +   S+HG++  ++R + + +F  G+V
Sbjct:   480 FLQSMSSTDKVIVFVSRKAVADHLSSDL-ILGNISVESLHGDREQRDREKALENFKTGKV 538

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              +++AT +  RG+++  V  V  FD P +I+EYVH+IGR  + G  G +I  +   +  +
Sbjct:   539 RILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRV 598

Query:   494 FQELVDILKSSGAGIPRELIN 514
               EL++IL+ +   IP EL++
Sbjct:   599 ASELINILERANQSIPEELVS 619


>ZFIN|ZDB-GENE-050706-53 [details] [associations]
            symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
            Uniprot:E7F401
        Length = 910

 Score = 544 (196.6 bits), Expect = 8.6e-52, P = 8.6e-52
 Identities = 120/415 (28%), Positives = 212/415 (51%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             +E+    SLT  +   LR++L + V G A P P  SF+     ++L+  I  + Y  PTP
Sbjct:   223 NEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEYTQPTP 282

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTR 220
             +Q Q +P ALSG+  +  A TGSGKTA+F+ P++    + +    +  + P+A+++ PTR
Sbjct:   283 IQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQK--ELEPGEGPIAVIVCPTR 340

Query:   221 ELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDI 280
             ELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TPGRLID + K   
Sbjct:   341 ELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKAT 400

Query:   281 ELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXX 339
              L  +   V DE D M   GF  QV  I   +    Q L++SAT  +++EK+        
Sbjct:   401 SLQRVTFLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILVDP 460

Query:   340 XXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSN 399
                  G     N+ + Q+   ++S + K       + +       +V+V  +   + L+ 
Sbjct:   461 IRVVQGDIGEANEDITQIVEVLQSGQDKWGWLTRRLVEFTSAGSVLVFVTKKANCEELAT 520

Query:   400 AISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDM 459
              + +  G     +HG+    ER +++  F    +PV+VAT +  RG+++  +R V+ +D+
Sbjct:   521 NL-IQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARGLDIPSIRTVVNYDV 579

Query:   460 PNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELIN 514
                I  + H+IGR  + G++G A   +  ++ +   +LV  L+ +   + ++L++
Sbjct:   580 ARDIDTHTHRIGRTGRAGEKGVAYTLLTTKDTSFAGDLVRNLEGANQSVSKDLLD 634


>UNIPROTKB|J9P4L6 [details] [associations]
            symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
            EMBL:AAEX03026218 Ensembl:ENSCAFT00000021498 Uniprot:J9P4L6
        Length = 598

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 141/461 (30%), Positives = 240/461 (52%)

Query:    63 KQKLLCRVANANRGMRXXXXXXXERLPATDECFYVRESDENSG-FQSLTIGQTDSLRKRL 121
             K+K++  + +   G         E     ++    RE+   SG  ++L   + +  R + 
Sbjct:    89 KRKMISEIISQEEGSTIQWTSSVEA--KIEDKKIKRENKLTSGKLENLRKEKINFFRNKH 146

Query:   122 EINVKGDAVPAPILSFSSCS----LSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             +I+V+G  +P PI +F        ++ +LLQNI  AG+  PTP+QMQAIP  L G+ LL 
Sbjct:   147 KIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGRELLA 206

Query:   178 SANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGL 237
             SA TGSGKT +F +P++ Q     L    N K   A++++PTREL  Q+  +   + +G 
Sbjct:   207 SAPTGSGKTLAFSIPILMQ-----LKQPTN-KGFRALIISPTRELANQIHRELVKISEGT 260

Query:   238 PFKTALVVGGDAMARQVY-RIQQGVELIVGTPGRLIDLLMKHD---IELDDIRMFVLDEV 293
              F+  ++      A++   +  +  +++V TP RLI LL K D   I+L  +   V+DE 
Sbjct:   261 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLL-KQDPPGIDLTSVEWLVVDES 319

Query:   294 DCMLQ---RGFRDQVMQIFRAISLPQI--LMYSATISQEVEKMXXXXXXXXXXXXXGKPN 348
             D + +    GFRDQ+  IF A +  ++   M+SA  + +VE+              G  N
Sbjct:   320 DKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSAIFAYDVEQWCKLNLDNVITVSIGARN 379

Query:   349 MPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMK 408
                + V+Q  ++V S   K      L+ K+ F PP +V+V S   A  L + + +  G+ 
Sbjct:   380 SAVETVEQELLFVGSETGKLLAMRELV-KKGFNPPVLVFVQSIERAKELFHEL-IYEGIN 437

Query:   409 ALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVH 468
                IH ++  ++R   + SF  G++ V++ T +L RG++  GV  VI +D P S  EY+H
Sbjct:   438 VDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIH 497

Query:   469 QIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIP 509
             +IGR  + G +G A+ F  E++K L + + ++++ +G  +P
Sbjct:   498 RIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVP 538


>ZFIN|ZDB-GENE-060623-1 [details] [associations]
            symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
            OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
            RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
            STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
            Uniprot:Q1ECZ5
        Length = 606

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 129/413 (31%), Positives = 222/413 (53%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCS----LSQKLLQNIEAAGYDMPTPVQMQAIPS 168
             + + +R +  INV G  +P P+ +F        L  +++ NI+AAG+  PTP+QMQA+P 
Sbjct:   141 KVNRIRHQNRINVHGTDIPDPVTTFEELQKEYDLDPRIIHNIKAAGFQTPTPIQMQAVPL 200

Query:   169 ALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEE 228
              +  + +L  A TGSGKT +F +P+++      L    N K   A++++PTREL  Q   
Sbjct:   201 MMHKREILACAPTGSGKTMAFCLPLLAH-----LRQPLN-KGFRALIISPTRELATQTHR 254

Query:   229 QAKLLGKGLPFKTALVVGG-DAMARQVYRIQQGVELIVGTPGRLIDLLMKHD--IELDDI 285
             +   L +G+ F+  ++  G +A+ +   +  +  +++V TP RLI LL +    I L  +
Sbjct:   255 ELLKLSEGVGFRVHMINKGVEAVKKYGPKSAKKFDILVTTPNRLIYLLNQDPPAINLSSV 314

Query:   286 RMFVLDEVDCMLQ---RGFRDQVMQIFRAISLPQI--LMYSATISQEVEKMXXXXXXXXX 340
                V+DE D + +    GFR+Q+  IF A S P +  +++SAT + +VE+          
Sbjct:   315 EWLVVDESDKLFEDGKTGFREQLATIFLACSSPNVRRVLFSATFATDVERWCKLNLDNLV 374

Query:   341 XXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNA 400
                 G  N   + V+Q  ++V S   K      L+ KQ F PP +V+V S   A  L + 
Sbjct:   375 SVSIGARNSAAETVEQQLLFVGSENGKILAMRNLI-KQGFLPPVLVFVQSIDRARELYHE 433

Query:   401 ISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMP 460
             + V  G+    IH ++  ++R  ++ SF  G++ V++ T +L RG++  G+  VI +D P
Sbjct:   434 L-VYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALLARGIDFKGINLVINYDFP 492

Query:   461 NSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELI 513
              S  EY+H+IGR  + G +G A+ F  E++K L + +  ++K +G  +P  +I
Sbjct:   493 TSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSIATVIKKAGCPVPDYMI 545


>POMBASE|SPCC10H11.01 [details] [associations]
            symbol:prp11 "ATP-dependent RNA helicase Prp11"
            species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
            "spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
            [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
            EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
            RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
            IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
            GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
            NextBio:20800113 Uniprot:Q9P7C7
        Length = 1014

 Score = 545 (196.9 bits), Expect = 1.1e-51, P = 1.1e-51
 Identities = 129/425 (30%), Positives = 224/425 (52%)

Query:    95 FYVRESDENSGFQSLTIGQTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAA 153
             FYV E +E    ++L+  + D LR  L+ I ++G   P P+ S+S C LS + +  I + 
Sbjct:   381 FYV-EPEE---LKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSL 436

Query:   154 GYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLA 213
             GY+ PT +Q QAIP+  SG+ ++  A TGSGKT +FL+P+     + R    +  + P+A
Sbjct:   437 GYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR--PLKTGEGPIA 494

Query:   214 MVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLID 273
             +++TPTREL +Q+  + K   K L  +     GG  +  Q+  +++G E++V TPGR+ID
Sbjct:   495 IIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMID 554

Query:   274 LLMKHDIELDDIRM---FVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVE 329
             +L  +   + ++      VLDE D M   GF  QVM+I   I    Q +++SAT  + +E
Sbjct:   555 VLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAME 614

Query:   330 KMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDIL--MSKQHFTPPAVVY 387
              +             G  ++    V+Q+        K  +L ++L  +         +V+
Sbjct:   615 ALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVF 674

Query:   388 VGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447
             V  +  AD L + + +  G  + SIHG K   +R   +  +  G   V++AT ++ RG++
Sbjct:   675 VDRQESADALLSDL-MKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLD 733

Query:   448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507
             +  ++ V+ +D PN +++YVH++GR  + G  G A+ F+  E +    ++   LK S   
Sbjct:   734 VKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQP 793

Query:   508 IPREL 512
             +P+EL
Sbjct:   794 VPKEL 798


>UNIPROTKB|Q91372 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
            "nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
            "mitochondrial cloud" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
            GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
            UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
            KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
        Length = 700

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 125/396 (31%), Positives = 207/396 (52%)

Query:   123 INVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTG 182
             ++V G  VP  IL+F   +L + L +N+  AGY   TPVQ  +IP  ++G+ L+  A TG
Sbjct:   262 VDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTG 321

Query:   183 SGKTASFLVPVISQCANIRLHHSQ--NQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFK 240
             SGKTA+FL+P++S   N  +  SQ    + P A+++ PTREL  Q+   A+    G   +
Sbjct:   322 SGKTAAFLLPILSYMMNEGITASQYLQLQEPEAIIIAPTRELINQIYLDARKFSYGTCVR 381

Query:   241 TALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRG 300
               +V GG      +  +++G  ++  TPGRL+D++ K  I L  +R  VLDE D ML  G
Sbjct:   382 PVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADRMLDMG 441

Query:   301 FRDQVMQIFRAISLP-----QILMYSATISQEVEKMXXXXXXXXXXXXX-GKPNMPNKAV 354
             F  ++ ++     +P     Q LM+SAT  +E+ ++              G        V
Sbjct:   442 FAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGGACSDV 501

Query:   355 KQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHG 414
              Q  + +  N K +KL +IL S +      +++V ++  AD ++  +       + SIHG
Sbjct:   502 AQTVLEMRENGKMEKLLEILKSSEK--ERTMIFVNTKKKADFIAGYLCQEK-FSSTSIHG 558

Query:   415 EKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRAS 474
             ++   +R   +  F  G+  VIV T +  RG+++  V+ VI +D+P  + EYVH+IGR  
Sbjct:   559 DREQYQRESALWDFRTGKCTVIVCTAVAARGLDIENVQHVINYDVPKEVDEYVHRIGRTG 618

Query:   475 QMGDEGTAIVFVNEENKNLF-QELVDILKSSGAGIP 509
             + G+ G A  F N ++ ++  + LV IL  +   +P
Sbjct:   619 RCGNTGKATSFFNVQDDHVIARPLVKILTDAHQEVP 654


>MGI|MGI:1919297 [details] [associations]
            symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
            GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
            CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
            OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
            EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
            IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
            ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
            PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
            Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
            UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
            InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
            Genevestigator:Q810A7 Uniprot:Q810A7
        Length = 929

 Score = 542 (195.9 bits), Expect = 1.6e-51, P = 1.6e-51
 Identities = 126/427 (29%), Positives = 217/427 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY    +E+    +LT  Q   LR +L + V G A P P  SF+     ++L+ 
Sbjct:   211 PPFEKNFY----NEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208
              I  + Y  PTP+Q Q +P ALSG+ ++  A TGSGKTA+F+ P++    + +    +  
Sbjct:   267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK--ELEPG 324

Query:   209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268
               P+A+++ PTRELC Q+  + K  GK    ++  V GG +M  Q   +Q+G E++V TP
Sbjct:   325 DGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 384

Query:   269 GRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQE 327
             GRLID + K    L  +   V DE D M   GF  QV  I   +    Q L++SAT  ++
Sbjct:   385 GRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK 444

Query:   328 VEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVY 387
             +EK+             G     N+ V Q+   + S   K       + +   +   +++
Sbjct:   445 IEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLF 504

Query:   388 VGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447
             V  +  A+ L++ +    G     +HG+    ER +++  F   ++PV+VAT +  RG++
Sbjct:   505 VTKKANAEELASNLK-QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLD 563

Query:   448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507
             +  ++ VI +D+   I  + H+IGR  + G++G A   +  ++ N   +LV  L+ +   
Sbjct:   564 IPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQH 623

Query:   508 IPRELIN 514
             + +EL++
Sbjct:   624 VSKELLD 630


>FB|FBgn0036104 [details] [associations]
            symbol:CG6418 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
            GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
            UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
            STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
            KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
            InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
            NextBio:812543 Uniprot:Q9VTC1
        Length = 791

 Score = 536 (193.7 bits), Expect = 2.3e-51, P = 2.3e-51
 Identities = 126/422 (29%), Positives = 214/422 (50%)

Query:    95 FYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAG 154
             FY +  D      +L   Q   LR+ L + V G + P P+ SF      ++L++ +  A 
Sbjct:   233 FYTQHDD----IAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAE 288

Query:   155 YDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAM 214
             Y  PTP+Q QA+P+ALSG+ ++  A TGSGKTA+F+ P++    + +    +    P+ +
Sbjct:   289 YTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQK--QLKPGDGPIGL 346

Query:   215 VLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDL 274
             +L PTREL +Q+  +AK  GK          GG +   Q   ++QG E+IV TPGR+ID+
Sbjct:   347 ILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDM 406

Query:   275 LMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXX 333
             +      L  +   VLDE D M   GF  QV  I   +    Q LM+SAT  + +E++  
Sbjct:   407 VKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIERLAR 466

Query:   334 XXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPA--VVYVGSR 391
                        G  N  N+ + Q +++V  N   QK   +L     F      +++V  +
Sbjct:   467 DVLSDPVRIVQGDLNEANQDITQ-SVYVFPNPL-QKWNWLLCHLVKFLSEGSVLIFVTKK 524

Query:   392 LGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGV 451
             + A+ +SN + +      L +HG+    +R +++  F   E  ++VAT +  RG+++  +
Sbjct:   525 VDAETVSNNLLIKE-YNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHI 583

Query:   452 RQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRE 511
             R V+ +D    I+ + H+IGR  + G++G A   V +++K     LV  L+ +   +P +
Sbjct:   584 RNVVNYDTARDIETHTHRIGRTGRAGEKGNAYTLVTDKDKEFAGHLVRNLEGADQLVPDD 643

Query:   512 LI 513
             L+
Sbjct:   644 LM 645


>UNIPROTKB|Q9KLH6 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
            family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 119/378 (31%), Positives = 204/378 (53%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             ++FS   L  +LL  +   G   PTP+Q QAIP  L GK +L  A TG+GKTA+F +P+I
Sbjct:     6 ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              +          N K   A+VL PTREL  QV +  +   KG   K   V GG +M  Q+
Sbjct:    66 QRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQL 125

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS- 313
               ++ GV++++ TPGRL+D      + L  + + VLDE D ML  GF   + ++ R +S 
Sbjct:   126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
             L Q L +SAT   +++ +                N   + V+Q+   V+  K+K++L   
Sbjct:   186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDK-KRKRELLSY 244

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L+  +++    +V+  +R G+D L+  + +  G+KA+SI+G+K    R++ +  F  G+V
Sbjct:   245 LIGSKNWQQ-VLVFTKTRQGSDALAEELKLD-GIKAVSINGDKSQGARQKALDDFKAGKV 302

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
               ++AT +  RG+++  + QV+ +DMP   ++YVH+IGR  + G  G A+  ++ + +  
Sbjct:   303 RALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQ 362

Query:   494 FQELVDILKSSGAGIPRE 511
              + +  +L +    +P+E
Sbjct:   363 LEAIERLLNTR---LPQE 377


>UNIPROTKB|Q9KS53 [details] [associations]
            symbol:VC1407 "ATP-dependent RNA helicase RhlE"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
            RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
            GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
            ProtClustDB:CLSK874358 Uniprot:Q9KS53
        Length = 397

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 122/361 (33%), Positives = 202/361 (55%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SFS   LS  L+Q +   GY  PT +Q QAIP  L G+ L+ +A TG+GKTASF++P++
Sbjct:     1 MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              +   +R   +Q +K   A++L PTREL +QV E+ +  GK    K+  V GG     Q 
Sbjct:    61 EK---LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQK 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
              R+  GV+++V TPGRL+DL  +  +  ++I M VLDE D ML  GF + + +I   + S
Sbjct:   118 QRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPS 177

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q L++SAT+S++V ++                      + Q  I V+ + K   L   
Sbjct:   178 EVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSA-LLSH 236

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L+++Q +   A++++ ++ GA  L + +    G+ A + H  +    R +++  F  G++
Sbjct:   237 LINEQQWDQ-ALIFIETKHGAAKLVSQLE-KRGIHAEAFHSGRSQAIRAQLLEDFKSGKI 294

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN-KN 492
               +VATG+  RG+++  + +V+ +D+P    EYVH+IGR  +    G AI FV+++N KN
Sbjct:   295 KYLVATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKN 354

Query:   493 L 493
             L
Sbjct:   355 L 355


>TIGR_CMR|VC_1407 [details] [associations]
            symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
            RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
            GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
            ProtClustDB:CLSK874358 Uniprot:Q9KS53
        Length = 397

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 122/361 (33%), Positives = 202/361 (55%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SFS   LS  L+Q +   GY  PT +Q QAIP  L G+ L+ +A TG+GKTASF++P++
Sbjct:     1 MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              +   +R   +Q +K   A++L PTREL +QV E+ +  GK    K+  V GG     Q 
Sbjct:    61 EK---LRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQK 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
              R+  GV+++V TPGRL+DL  +  +  ++I M VLDE D ML  GF + + +I   + S
Sbjct:   118 QRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPS 177

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q L++SAT+S++V ++                      + Q  I V+ + K   L   
Sbjct:   178 EVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSA-LLSH 236

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L+++Q +   A++++ ++ GA  L + +    G+ A + H  +    R +++  F  G++
Sbjct:   237 LINEQQWDQ-ALIFIETKHGAAKLVSQLE-KRGIHAEAFHSGRSQAIRAQLLEDFKSGKI 294

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN-KN 492
               +VATG+  RG+++  + +V+ +D+P    EYVH+IGR  +    G AI FV+++N KN
Sbjct:   295 KYLVATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKN 354

Query:   493 L 493
             L
Sbjct:   355 L 355


>TIGR_CMR|VC_A0768 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 119/378 (31%), Positives = 204/378 (53%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             ++FS   L  +LL  +   G   PTP+Q QAIP  L GK +L  A TG+GKTA+F +P+I
Sbjct:     6 ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              +          N K   A+VL PTREL  QV +  +   KG   K   V GG +M  Q+
Sbjct:    66 QRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQL 125

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS- 313
               ++ GV++++ TPGRL+D      + L  + + VLDE D ML  GF   + ++ R +S 
Sbjct:   126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
             L Q L +SAT   +++ +                N   + V+Q+   V+  K+K++L   
Sbjct:   186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDK-KRKRELLSY 244

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L+  +++    +V+  +R G+D L+  + +  G+KA+SI+G+K    R++ +  F  G+V
Sbjct:   245 LIGSKNWQQ-VLVFTKTRQGSDALAEELKLD-GIKAVSINGDKSQGARQKALDDFKAGKV 302

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
               ++AT +  RG+++  + QV+ +DMP   ++YVH+IGR  + G  G A+  ++ + +  
Sbjct:   303 RALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQ 362

Query:   494 FQELVDILKSSGAGIPRE 511
              + +  +L +    +P+E
Sbjct:   363 LEAIERLLNTR---LPQE 377


>FB|FBgn0003261 [details] [associations]
            symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
            evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
            GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
            GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
            EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
            RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
            RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
            RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
            ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
            MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
            EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
            CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
            OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
            Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
        Length = 719

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 135/410 (32%), Positives = 211/410 (51%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             R+  EI V+G  VP PI  FS   L   +++ I   GY  PT +Q Q  P A+SG + + 
Sbjct:   265 REEQEITVRGQ-VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVG 323

Query:   178 SANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGL 237
              A TGSGKT  +++P I    N +    Q    P+A+VL PTREL  Q+++ A   G   
Sbjct:   324 IAKTGSGKTLGYILPAIVHINNQQ--PLQRGDGPIALVLAPTRELAQQIQQVATEFGSSS 381

Query:   238 PFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCML 297
               +   V GG     Q+  +Q+G E+++ TPGRLID L      L      VLDE D ML
Sbjct:   382 YVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRML 441

Query:   298 QRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVK 355
               GF  Q+ +I   I    Q LM+SAT  +EV+++             G   +  N  ++
Sbjct:   442 DMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIR 501

Query:   356 QLAIWVESNKKKQKLFDILMSKQHFTPPA----VVYVGSRLGADLLSNAISVTTGMKALS 411
             Q+    +   K++KL   L+S  + T  +    +++V ++   D L   I  + G++  +
Sbjct:   502 QVVDVCDEFSKEEKL-KTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIR-SFGVRCGA 559

Query:   412 IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIG 471
             IHG+K   ER  ++R F  G+  ++VAT +  RG+++ G++ VI FD P + ++Y+H+IG
Sbjct:   560 IHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIG 619

Query:   472 RASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELIN----SRY 517
             R  +   +GT+  F  + N    + LVD+L+ +   I   L N    SRY
Sbjct:   620 RTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNSRY 669


>TAIR|locus:2176192 [details] [associations]
            symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
            evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
            OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
            RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
            SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
            EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
            GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
            ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
            Uniprot:Q9LU46
        Length = 591

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 127/406 (31%), Positives = 217/406 (53%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSG 172
             Q D +RK+  I V GD +P PI +F      + +L  ++  G   PTP+Q+Q +P  L+G
Sbjct:   124 QRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAG 183

Query:   173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHS-QNQKNPLAMVLTPTRELCIQ---VEE 228
             + ++  A TGSGKT  F++P+I       +       + P+ +++ P+REL  Q   V E
Sbjct:   184 RDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVE 243

Query:   229 Q--AKLLGKGLP-FKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDI 285
             Q  A L+  G P  ++ L +GG  M  Q+  +++GV ++V TPGRL D+L K  + LD  
Sbjct:   244 QFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDAC 303

Query:   286 RMFVLDEVDCMLQRGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMXXXXXXXXXXXXX 344
             R   LDE D ++  GF D + ++F    S  Q L++SAT+  +++               
Sbjct:   304 RYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNV 363

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             G+    N  V Q    VE  K++ K+  +L   Q  +PP +++  ++   D +   + + 
Sbjct:   364 GRAGAANLDVIQE---VEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYL-LL 419

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
              G++A++IHG K  ++R   + SF  G+  V+VAT +  +G++   ++ VI +DMP  I+
Sbjct:   420 KGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 479

Query:   465 EYVHQIGRASQMGDEGTAIVFVNE-ENKNLFQELVDILKSSGAGIP 509
              YVH+IGR  + G  G A  F+N+ +++    +L  +L+ +   IP
Sbjct:   480 NYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIP 525


>UNIPROTKB|F1SQ03 [details] [associations]
            symbol:LOC100524536 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
            ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
            GeneID:100524536 Uniprot:F1SQ03
        Length = 630

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 141/440 (32%), Positives = 230/440 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVK------GDA--VPAPILSFSS 139
             LP   + FYV    E     S++  Q D  RK    NV       G+   +P PI  F  
Sbjct:   173 LPPIHKNFYV----ETKATSSMSQVQVDIWRKE-NFNVMCNDLKDGEKRPIPNPICKFED 227

Query:   140 C-SLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCA 198
                   +L+++I+ AG+  PTP+Q QA P  L G  L+  A TG+GKT S+L+P      
Sbjct:   228 AFGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLN 287

Query:   199 NIRLHHSQNQKN-PLAMVLTPTRELCIQV-EEQAKLLGKGLPFKTALVVGGDAMARQVYR 256
             +  +  S+ ++N P  +VLTPTREL +QV  E +K   KGL  K+  + GG     Q+  
Sbjct:   288 SQPV--SRGKRNGPGMLVLTPTRELALQVGAECSKYSYKGL--KSVCIYGGGNRKGQIQD 343

Query:   257 IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP- 315
             I +GV++I+ TPGRL DL M + + L  I   VLDE D ML  GF  Q+M+I   +    
Sbjct:   344 IMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDR 403

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN-KAVKQLAIWVESNKKKQKLFDIL 374
             Q +M SAT    + ++             G  ++     VKQ  I + + ++K+ LF   
Sbjct:   404 QTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNII-ITTEEEKRSLFQEF 462

Query:   375 MSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVP 434
             +         +V+V  +L AD LS+ +S+  G+   S+HG++   +R   +  F  G+V 
Sbjct:   463 LQSLSPKDKVIVFVSRKLIADDLSSDLSIQ-GIPVQSLHGDREQSDRERALDDFKTGKVK 521

Query:   435 VIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLF 494
             +++AT +  RG+++  V  V  ++ P +I+EYVH++GR  + G  G ++  + +++  + 
Sbjct:   522 ILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVA 581

Query:   495 QELVDILKSSGAGIPRELIN 514
              EL++IL+ +   IP +L++
Sbjct:   582 GELIEILQRANQSIPEDLLS 601


>UNIPROTKB|I3LHW0 [details] [associations]
            symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
            Uniprot:I3LHW0
        Length = 621

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 141/440 (32%), Positives = 230/440 (52%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVK------GDA--VPAPILSFSS 139
             LP   + FYV    E     S++  Q D  RK    NV       G+   +P PI  F  
Sbjct:   164 LPPIHKNFYV----ETKATSSMSQVQVDIWRKE-NFNVMCNDLKDGEKRPIPNPICKFED 218

Query:   140 C-SLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCA 198
                   +L+++I+ AG+  PTP+Q QA P  L G  L+  A TG+GKT S+L+P      
Sbjct:   219 AFGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLN 278

Query:   199 NIRLHHSQNQKN-PLAMVLTPTRELCIQV-EEQAKLLGKGLPFKTALVVGGDAMARQVYR 256
             +  +  S+ ++N P  +VLTPTREL +QV  E +K   KGL  K+  + GG     Q+  
Sbjct:   279 SQPV--SRGKRNGPGMLVLTPTRELALQVGAECSKYSYKGL--KSVCIYGGGNRKGQIQD 334

Query:   257 IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP- 315
             I +GV++I+ TPGRL DL M + + L  I   VLDE D ML  GF  Q+M+I   +    
Sbjct:   335 IMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDR 394

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN-KAVKQLAIWVESNKKKQKLFDIL 374
             Q +M SAT    + ++             G  ++     VKQ  I + + ++K+ LF   
Sbjct:   395 QTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNII-ITTEEEKRSLFQEF 453

Query:   375 MSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVP 434
             +         +V+V  +L AD LS+ +S+  G+   S+HG++   +R   +  F  G+V 
Sbjct:   454 LQSLSPKDKVIVFVSRKLIADDLSSDLSIQ-GIPVQSLHGDREQSDRERALDDFKTGKVK 512

Query:   435 VIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLF 494
             +++AT +  RG+++  V  V  ++ P +I+EYVH++GR  + G  G ++  + +++  + 
Sbjct:   513 ILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVA 572

Query:   495 QELVDILKSSGAGIPRELIN 514
              EL++IL+ +   IP +L++
Sbjct:   573 GELIEILQRANQSIPEDLLS 592


>MGI|MGI:105037 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=ISO] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IDA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
            receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=ISO]
            [GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0060765 "regulation of androgen receptor signaling pathway"
            evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
            p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
            GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
            ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
            UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
            DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
            PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
            Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
        Length = 614

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 134/436 (30%), Positives = 220/436 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + D+ R+  EI V+G   P P+L+F   +    
Sbjct:    49 DELPKFEKNFY----QEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPAN 104

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  I    +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   105 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 159

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   160 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVE 219

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   220 ICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 279

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE ++K  +L + +MS+
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   340 KE--NKTIVFVETKRRCDELTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI 396

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   397 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456

Query:   498 VDILKSSGAGIPRELI 513
             + +L+ +   I  +L+
Sbjct:   457 ISVLREANQAINPKLL 472


>RGD|619906 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
            activity" evidence=ISO] [GO:0003713 "transcription coactivator
            activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
            evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
            rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
            evidence=IDA] [GO:0030331 "estrogen receptor binding"
            evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
            "pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=IDA] [GO:0050681 "androgen receptor binding"
            evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
            signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
            signaling pathway by p53 class mediator" evidence=IEA;ISO]
            [GO:2001014 "regulation of skeletal muscle cell differentiation"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
            GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
            EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
            UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
            Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
            UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
            Genevestigator:Q6AYI1 Uniprot:Q6AYI1
        Length = 615

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 134/436 (30%), Positives = 220/436 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + D+ R+  EI V+G   P P+L+F   +    
Sbjct:    49 DELPKFEKNFY----QEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPAN 104

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  I    +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   105 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 159

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   160 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVE 219

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   220 ICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 279

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE ++K  +L + +MS+
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   340 KE--NKTIVFVETKRRCDELTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI 396

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   397 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456

Query:   498 VDILKSSGAGIPRELI 513
             + +L+ +   I  +L+
Sbjct:   457 ISVLREANQAINPKLL 472


>TIGR_CMR|CPS_1590 [details] [associations]
            symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
            STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
            OMA:AISECGY ProtClustDB:CLSK768209
            BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
        Length = 455

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 122/384 (31%), Positives = 206/384 (53%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +S  S  LS  LL+ ++A GY   TP+Q +AIP    G  LL SA TG+GKTA+F +P++
Sbjct:     1 MSVDSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPIL 60

Query:   195 SQCANIRL----------HHSQNQKNPL-----AMVLTPTRELCIQVEEQAKLLGKGLPF 239
                A               +S  +K+       A++LTPTREL  QV +  K   + LP 
Sbjct:    61 DAIAKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPI 120

Query:   240 KTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQR 299
             K+ +V GG  MA Q   ++QG++++V TPGRL++ L   +++L  ++  VLDE D ML  
Sbjct:   121 KSGVVYGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDM 180

Query:   300 GFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLA 358
             GF   + ++  A+    Q LM+SAT S  V+ +              K N  +  +KQ  
Sbjct:   181 GFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAV 240

Query:   359 IWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPM 418
              WV   +K++ L + L+   ++    +V+ G++  A+ L+  + +  G+KA   HG+K  
Sbjct:   241 YWVTEERKRELLSE-LIGVNNWQQ-VLVFAGTKESANTLAKELKLD-GIKAALCHGDKTQ 297

Query:   419 KERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGD 478
               R + +  F  G+V V+VAT +  RG+++  +  V+ F +P   ++YVH++GR  + G 
Sbjct:   298 GARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGK 357

Query:   479 EGTAIVFVNEENKNLFQELVDILK 502
              GTAI  V+ +++   + +  +++
Sbjct:   358 SGTAISLVSPKDERFLENIEQLIE 381


>UNIPROTKB|F1NM08 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
            ArrayExpress:F1NM08 Uniprot:F1NM08
        Length = 595

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 135/442 (30%), Positives = 222/442 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + +  R   E+ V+G   P PI++F   +    
Sbjct:    37 DELPKFEKNFY----QEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPAN 92

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             +++ I+   +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:    93 VMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 147

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   148 PFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVE 207

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   208 ICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 267

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE + K  +L + +MS+
Sbjct:   268 ATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSE 327

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   328 KE--NKTIVFVETKRRCDDLTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI 384

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   385 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDL 444

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +LI  R
Sbjct:   445 ISVLREANQAINPKLLQLIEDR 466

 Score = 205 (77.2 bits), Expect = 2.9e-13, P = 2.9e-13
 Identities = 61/222 (27%), Positives = 109/222 (49%)

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLF 371
             Q LM+SAT  +EV ++             G   +  N  + Q+      VE + K  +L 
Sbjct:   262 QTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLM 321

Query:   372 DILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG 431
             + +MS++      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G
Sbjct:   322 EEIMSEKE--NKTIVFVETKRRCDDLTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHG 378

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
             + P+++AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N 
Sbjct:   379 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 438

Query:   492 NLFQELVDILKSSGAGI-PR--ELINSR------------YT 518
                 +L+ +L+ +   I P+  +LI  R            Y+
Sbjct:   439 KQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYS 480


>UNIPROTKB|F1NXI3 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
            receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
            GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
            ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
            ArrayExpress:F1NXI3 Uniprot:F1NXI3
        Length = 603

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 135/442 (30%), Positives = 222/442 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + +  R   E+ V+G   P PI++F   +    
Sbjct:    45 DELPKFEKNFY----QEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPAN 100

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             +++ I+   +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   101 VMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 155

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   156 PFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVE 215

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   216 ICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 275

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE + K  +L + +MS+
Sbjct:   276 ATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSE 335

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   336 KE--NKTIVFVETKRRCDDLTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI 392

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   393 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDL 452

Query:   498 VDILKSSGAGI-PR--ELINSR 516
             + +L+ +   I P+  +LI  R
Sbjct:   453 ISVLREANQAINPKLLQLIEDR 474

 Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
 Identities = 61/222 (27%), Positives = 109/222 (49%)

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLF 371
             Q LM+SAT  +EV ++             G   +  N  + Q+      VE + K  +L 
Sbjct:   270 QTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLM 329

Query:   372 DILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG 431
             + +MS++      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G
Sbjct:   330 EEIMSEKE--NKTIVFVETKRRCDDLTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHG 386

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
             + P+++AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N 
Sbjct:   387 KAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNI 446

Query:   492 NLFQELVDILKSSGAGI-PR--ELINSR------------YT 518
                 +L+ +L+ +   I P+  +LI  R            Y+
Sbjct:   447 KQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYS 488


>UNIPROTKB|F1MBQ8 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
            class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
            receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
            receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IEA] [GO:0036002
            "pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
            of intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
            GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
            EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
            UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
            Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
            NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
        Length = 614

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 133/436 (30%), Positives = 220/436 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + ++ R+  EI V+G   P P+L+F   +    
Sbjct:    49 DELPKFEKNFY----QEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPAN 104

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  I    +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   105 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 159

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   160 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVE 219

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   220 ICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 279

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE ++K  +L + +MS+
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   340 KE--NKTIVFVETKRRCDELTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI 396

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   397 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456

Query:   498 VDILKSSGAGIPRELI 513
             + +L+ +   I  +L+
Sbjct:   457 ISVLREANQAINPKLL 472


>UNIPROTKB|F1PEA6 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] [GO:0003712 "transcription cofactor
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
            Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
        Length = 671

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 133/436 (30%), Positives = 220/436 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + ++ R+  EI V+G   P P+L+F   +    
Sbjct:   106 DELPKFEKNFY----QEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPAN 161

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  I    +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   162 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 216

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   217 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVE 276

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   277 ICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 336

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE ++K  +L + +MS+
Sbjct:   337 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 396

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   397 KE--NKTIVFVETKRRCDELTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI 453

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   454 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 513

Query:   498 VDILKSSGAGIPRELI 513
             + +L+ +   I  +L+
Sbjct:   514 ISVLREANQAINPKLL 529


>UNIPROTKB|J3KTA4 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
            Ensembl:ENST00000578804 Uniprot:J3KTA4
        Length = 614

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 133/436 (30%), Positives = 220/436 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + ++ R+  EI V+G   P P+L+F   +    
Sbjct:    49 DELPKFEKNFY----QEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPAN 104

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  I    +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   105 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 159

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   160 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVE 219

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   220 ICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 279

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE ++K  +L + +MS+
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   340 KE--NKTIVFVETKRRCDELTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI 396

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   397 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456

Query:   498 VDILKSSGAGIPRELI 513
             + +L+ +   I  +L+
Sbjct:   457 ISVLREANQAINPKLL 472


>UNIPROTKB|P17844 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
            evidence=IEA] [GO:0045069 "regulation of viral genome replication"
            evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
            [GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IMP] [GO:0072332
            "intrinsic apoptotic signaling pathway by p53 class mediator"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
            "regulation of skeletal muscle cell differentiation" evidence=ISS]
            [GO:0045667 "regulation of osteoblast differentiation"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0050681
            "androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
            of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
            "positive regulation of intracellular estrogen receptor signaling
            pathway" evidence=IDA] [GO:0003713 "transcription coactivator
            activity" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
            "pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
            GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
            GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
            GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
            EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
            RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
            PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
            IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
            DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
            PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
            Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
            CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
            HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
            InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
            EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
            ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
            Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
        Length = 614

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 133/436 (30%), Positives = 220/436 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + ++ R+  EI V+G   P P+L+F   +    
Sbjct:    49 DELPKFEKNFY----QEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPAN 104

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  I    +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   105 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 159

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   160 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVE 219

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   220 ICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 279

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE ++K  +L + +MS+
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   340 KE--NKTIVFVETKRRCDELTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI 396

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   397 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456

Query:   498 VDILKSSGAGIPRELI 513
             + +L+ +   I  +L+
Sbjct:   457 ISVLREANQAINPKLL 472


>UNIPROTKB|Q4R6M5 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
            HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
            Uniprot:Q4R6M5
        Length = 614

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 133/436 (30%), Positives = 220/436 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + ++ R+  EI V+G   P P+L+F   +    
Sbjct:    49 DELPKFEKNFY----QEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPAN 104

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  I    +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   105 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 159

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   160 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVE 219

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
             + + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   220 ICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 279

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE ++K  +L + +MS+
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   340 KE--NKTIVFVETKRRCDELTRKMR-RDGWPAMGIHGDKSQQERGWVLNEFKHGKAPILI 396

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   397 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456

Query:   498 VDILKSSGAGIPRELI 513
             + +L+ +   I  +L+
Sbjct:   457 ISVLREANQAINPKLL 472


>FB|FBgn0029979 [details] [associations]
            symbol:CG10777 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
            GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
            RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
            MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
            KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
            InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
            NextBio:774939 Uniprot:Q9W3M7
        Length = 945

 Score = 532 (192.3 bits), Expect = 2.1e-50, P = 2.1e-50
 Identities = 128/403 (31%), Positives = 209/403 (51%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSG 172
             Q   +R+ LEI V G+ +P P++SF   SL   +++ ++  G+  PT +Q Q  P ALSG
Sbjct:   215 QVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSG 274

Query:   173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232
             + L+  A TGSGKT ++++P I    N         + P+A+VL PTREL  Q++   + 
Sbjct:   275 RDLVGIAQTGSGKTLAYMLPAIVHIGN--QPPIIRGEGPIALVLAPTRELAQQIQSVVRD 332

Query:   233 LGKGL-P-FKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVL 290
              G    P  +   + GG +   Q   + +GVE+I+ TPGRLID L   +  L      VL
Sbjct:   333 YGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVL 392

Query:   291 DEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNM 349
             DE D ML  GF  Q+ +I   I    Q++M+SAT  +EV+ +             G  N+
Sbjct:   393 DEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNL 452

Query:   350 P-NKAVKQLAIWVESNKKKQKLFDIL------MSKQHFTPPAVVYVGSRLGADLLSNAIS 402
               N  ++Q+       +K Q+L  +L       +  +     +V+V +++  + +   I 
Sbjct:   453 SANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIR 512

Query:   403 VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNS 462
                G  A SIHG+K   ER  +++ F  G+  +++AT +  RG+++  ++ VI +D PNS
Sbjct:   513 AE-GYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNS 571

Query:   463 IKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSG 505
              + YVH+IGR  +    GTA  F   +N    +EL+ +L+ +G
Sbjct:   572 SENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVLEEAG 614


>TAIR|locus:2034481 [details] [associations]
            symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
            "RNA methylation" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
            EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
            OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
            IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
            UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
            PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
            KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
            PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
            GermOnline:AT1G31970 Uniprot:Q9C551
        Length = 537

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 128/412 (31%), Positives = 219/412 (53%)

Query:   111 IGQTDSLRKRLEINVKG--DAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPS 168
             +G+ +S ++++ +  KG  +A  A + +F+  +L + +L   +   ++ P+P+Q    P 
Sbjct:    90 LGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPF 147

Query:   169 ALSGKSLLVSANTGSGKTASFLVPVISQCA--NIRLHHSQNQKNPLAMVLTPTRELCIQV 226
              L G+ L+  A TGSGKT +F +P I      N ++     + NP  +VL+PTREL +Q+
Sbjct:   148 LLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQI 207

Query:   227 EEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIR 286
              +  +  G+    K+  V GG +   Q+  I+ GV++++GTPGRL DL+  + + L D+ 
Sbjct:   208 SDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVS 267

Query:   287 MFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXX-XXXXX 344
               VLDE D ML  GF + V  I    + + Q++M+SAT   +V K+              
Sbjct:   268 FVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVII 327

Query:   345 GKPNMP-NKAVKQLAIWVESNKKKQKLFDILMSKQHFTPP--AVVYVGSRLGADLLSNAI 401
             G  ++  N  V Q+   ++   + Q+L   L+ K H +     +V+   ++ A+ L   +
Sbjct:   328 GSVDLAANHDVMQIIEVLDERARDQRLI-ALLEKYHKSQKNRVLVFALYKVEAERLERFL 386

Query:   402 SVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPN 461
                 G KA+SIHG K   ER   +  F  G  P++VAT +  RG+++  V  VI +  P 
Sbjct:   387 Q-QRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPL 445

Query:   462 SIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELI 513
             + ++YVH+IGR  + G +G A  F    NK L  ELV++L+ +G  +P +L+
Sbjct:   446 TTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVLREAGQVVPADLL 497


>TAIR|locus:2065215 [details] [associations]
            symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
            HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
            IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
            ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
            PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
            KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
            OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
            Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
        Length = 760

 Score = 525 (189.9 bits), Expect = 2.5e-50, P = 2.5e-50
 Identities = 123/414 (29%), Positives = 207/414 (50%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             +E      +T  +T   R+RL I V G  V  P+ +F  C  S +++  I+   Y+ PT 
Sbjct:   194 EELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTA 253

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTR 220
             +Q QA+P  LSG+ ++  A TGSGKTA+F++P+I    +      Q  + P+ ++  PTR
Sbjct:   254 IQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMD--QPELQRDEGPIGVICAPTR 311

Query:   221 ELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDI 280
             EL  Q+  +AK   K    + + V GG +   Q   ++ G E++V TPGRLID+L    +
Sbjct:   312 ELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKAL 371

Query:   281 ELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXX 339
              +      VLDE D M   GF  QV  I   I    Q L++SAT+  +VEK+        
Sbjct:   372 TMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDP 431

Query:   340 XXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSN 399
                  G+  M N+ + Q+   + S+ +K       +         +V+   +   D +  
Sbjct:   432 IRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEA 491

Query:   400 AISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDM 459
              +++ +  K  ++HG+K    R E ++ F  G   V++AT +  RG+++  ++ V+ +D+
Sbjct:   492 QLTLNS-FKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDI 550

Query:   460 PNSIKEYVHQIGRASQMGD-EGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
                +  +VH+IGR  + GD +G A   V +       ELV+ L ++G  +P EL
Sbjct:   551 AKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPEL 604


>UNIPROTKB|Q48AV0 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 120/371 (32%), Positives = 211/371 (56%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             ++FSS SL   LL+ I  + YD PT +Q Q+IP  L+   ++  A TG+GKTA+F +P++
Sbjct:     5 MTFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPIL 64

Query:   195 SQCANIRLHHSQNQKNPL-AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253
              Q  ++     Q  K  L A+VLTPTREL  QV +     G+       +  GG +  +Q
Sbjct:    65 QQLISV-----QPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQ 119

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI- 312
             +  ++ GV++++ TPGRL+DLL    + L +I   V DE D ML  GF++++ QI + + 
Sbjct:   120 ISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLP 179

Query:   313 SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                Q L++SAT + ++ KM              + N     V+QL   V++++K++ L  
Sbjct:   180 KTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRE-LTS 238

Query:   373 ILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
              L+  +++    +V+  ++  AD L+  ++   G+K+L+IHG+K    R + +  F  G+
Sbjct:   239 FLIGSRNWKQ-VLVFTRTKQCADDLAKEMT-KDGVKSLAIHGDKSQGAREKALHEFKEGK 296

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492
             V  ++AT +  RG+++ G+  VI +++P + ++YVH+IGR ++ G+ G A+  V+   + 
Sbjct:   297 VRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEW 356

Query:   493 LF---QELVDI 500
             L    +EL+DI
Sbjct:   357 LLTAIEELLDI 367


>TIGR_CMR|CPS_0042 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 120/371 (32%), Positives = 211/371 (56%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             ++FSS SL   LL+ I  + YD PT +Q Q+IP  L+   ++  A TG+GKTA+F +P++
Sbjct:     5 MTFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPIL 64

Query:   195 SQCANIRLHHSQNQKNPL-AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253
              Q  ++     Q  K  L A+VLTPTREL  QV +     G+       +  GG +  +Q
Sbjct:    65 QQLISV-----QPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQ 119

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI- 312
             +  ++ GV++++ TPGRL+DLL    + L +I   V DE D ML  GF++++ QI + + 
Sbjct:   120 ISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLP 179

Query:   313 SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                Q L++SAT + ++ KM              + N     V+QL   V++++K++ L  
Sbjct:   180 KTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRE-LTS 238

Query:   373 ILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
              L+  +++    +V+  ++  AD L+  ++   G+K+L+IHG+K    R + +  F  G+
Sbjct:   239 FLIGSRNWKQ-VLVFTRTKQCADDLAKEMT-KDGVKSLAIHGDKSQGAREKALHEFKEGK 296

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492
             V  ++AT +  RG+++ G+  VI +++P + ++YVH+IGR ++ G+ G A+  V+   + 
Sbjct:   297 VRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEW 356

Query:   493 LF---QELVDI 500
             L    +EL+DI
Sbjct:   357 LLTAIEELLDI 367


>TAIR|locus:2057640 [details] [associations]
            symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
            GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
            OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
            RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
            SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
            EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
            GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
            ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
            Uniprot:P93008
        Length = 733

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 123/412 (29%), Positives = 210/412 (50%)

Query:   118 RKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLV 177
             R+   I+ KG  +P P+ S+    L+ +LL+ +E AGY  P+P+QM AIP  L  + ++ 
Sbjct:   296 REDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIG 355

Query:   178 SANTGSGKTASFLVPVISQCANIRLHHSQNQ-KNPLAMVLTPTRELCIQVEEQAKLLGKG 236
              A TGSGKTA+F++P+++  + +     +N+ + P A+V+ PTREL  Q+EE+       
Sbjct:   356 IAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHY 415

Query:   237 LPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCM 296
             L F+   +VGG ++  Q  +I QG E+++ TPGRLID L +    L+     VLDE D M
Sbjct:   416 LGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 475

Query:   297 LQRGFRDQVMQIFRAISLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQ 356
             +  GF  QV  +  A+    +   +     + +K+             G   +  K ++ 
Sbjct:   476 IDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRN 535

Query:   357 -LAIWVESNKKKQKLFD---ILM--SKQHFT----------PPAVVYVGSRLGADLLSNA 400
              + + + +  K   L     I+M  S++ F             A+V+V ++   D ++  
Sbjct:   536 PVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKN 595

Query:   401 ISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMP 460
             +    G +  ++HG K  ++R   +  F      V+VAT ++GRG+++  V  VI +DMP
Sbjct:   596 LD-KAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMP 654

Query:   461 NSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
               I+ Y H+IGR  + G  G A  F+   +  +F +L  +L  S + +P EL
Sbjct:   655 KHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPEL 706


>DICTYBASE|DDB_G0288501 [details] [associations]
            symbol:ddx42 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
            GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
            STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
            KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
        Length = 986

 Score = 530 (191.6 bits), Expect = 4.1e-50, P = 4.1e-50
 Identities = 123/415 (29%), Positives = 214/415 (51%)

Query:   101 DENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTP 160
             +E+    +LT  Q   +RK L+I + G  +  P+ SF        LLQ I     + PTP
Sbjct:   271 EEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTP 330

Query:   161 VQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTR 220
             +Q QAIP ALSG+ L+  A TGSGKTA+F+ P IS   +    + +    P+A+ L PTR
Sbjct:   331 IQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMD--QPYLEKGDGPIALFLAPTR 388

Query:   221 ELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDI 280
             EL  Q+  +     K    KT ++ GG +  +Q   ++ G E+IV TPGRLID++     
Sbjct:   389 ELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKAT 448

Query:   281 ELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXX 339
             +L+ +   VLDE D M   GF  QV+ I   +    Q L++SAT    VE+         
Sbjct:   449 KLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTILSDP 508

Query:   340 XXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSN 399
                  G     N  + Q+   ++S+  K       ++        +++V +++  + LS+
Sbjct:   509 IKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGSVLIFVSTKVAVEQLSS 568

Query:   400 AISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDM 459
              ++   G +  ++HG+K   ER + +++F  G++ +++AT +  RG+++  ++ V+ +D 
Sbjct:   569 NLT-KFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNVVNYDT 627

Query:   460 PNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELIN 514
                I+ + H+IGR  + G+ G A   +  ++ +   +L+  L+S+   +P ELI+
Sbjct:   628 SRDIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSVDLIKNLESASQFVPPELID 682


>UNIPROTKB|A5A6J2 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
            CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
            UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
            GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
            Uniprot:A5A6J2
        Length = 614

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 133/436 (30%), Positives = 219/436 (50%)

Query:    86 ERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQK 145
             + LP  ++ FY     E+      T  + ++ R+  EI V+G   P P+L+F   +    
Sbjct:    49 DELPKFEKNFY----QEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPAN 104

Query:   146 LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS 205
             ++  I    +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H 
Sbjct:   105 VMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQ 159

Query:   206 ---QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVE 262
                +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE
Sbjct:   160 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVE 219

Query:   263 LIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYS 321
               + TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+S
Sbjct:   220 NCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 279

Query:   322 ATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSK 377
             AT  +EV ++             G   +  N  + Q+      VE ++K  +L + +MS+
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   378 QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIV 437
             +      +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++
Sbjct:   340 KE--NKTIVFVETKRRCDELTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI 396

Query:   438 ATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQEL 497
             AT +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L
Sbjct:   397 ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456

Query:   498 VDILKSSGAGIPRELI 513
             + +L+ +   I  +L+
Sbjct:   457 ISVLREANQAINPKLL 472


>UNIPROTKB|Q5R4I9 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
            GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
            RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
            PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
            Uniprot:Q5R4I9
        Length = 614

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 132/433 (30%), Positives = 218/433 (50%)

Query:    89 PATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQ 148
             P  ++ FY     E+      T  + ++ R+  EI V+G   P P+L+F   +    ++ 
Sbjct:    52 PKFEKNFY----QEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMD 107

Query:   149 NIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHS--- 205
              I    +  PT +Q Q  P ALSG  ++  A TGSGKT S+L+P I     + ++H    
Sbjct:   108 VIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI-----VHINHQPFL 162

Query:   206 QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIV 265
             +    P+ +VL PTREL  QV++ A    +    K+  + GG     Q+  +++GVE+ +
Sbjct:   163 ERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICI 222

Query:   266 GTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATI 324
              TPGRLID L      L      VLDE D ML  GF  Q+ +I   I    Q LM+SAT 
Sbjct:   223 ATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 282

Query:   325 SQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIW---VESNKKKQKLFDILMSKQHF 380
              +EV ++             G   +  N  + Q+      VE ++K  +L + +MS++  
Sbjct:   283 PKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKE- 341

Query:   381 TPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATG 440
                 +V+V ++   D L+  +    G  A+ IHG+K  +ER  ++  F  G+ P+++AT 
Sbjct:   342 -NKTIVFVETKRRCDELTRKMR-RDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 399

Query:   441 ILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDI 500
             +  RG+++  V+ VI +D PNS ++Y+H+IGR ++    GTA  F    N     +L+ +
Sbjct:   400 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 459

Query:   501 LKSSGAGIPRELI 513
             L+ +   I  +L+
Sbjct:   460 LREANQAINPKLL 472


>UNIPROTKB|G3MYF0 [details] [associations]
            symbol:LOC100300937 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
            Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
        Length = 608

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 135/436 (30%), Positives = 226/436 (51%)

Query:    88 LPATDECFYVRESDENSGFQS-LTIGQTDSLRKRLEINVKGDA--VPAPILSFSSCSLSQ 144
             LP   +  Y+     +S  ++ + I + ++   R +   +G+   +P P  +F       
Sbjct:   150 LPPIKKNLYIESKATHSLSEAQVEIWRKENFNIRCDDLTEGEKRPIPKPTCTFEDAFQQY 209

Query:   145 -KLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLH 203
              +++Q+I  AG+  PTP+Q Q+ P  L G  L+  A TG+GKT S+L+P       I +H
Sbjct:   210 PEIMQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGF-----IHIH 264

Query:   204 H---SQNQKN-PLAMVLTPTRELCIQVE-EQAKLLGKGLPFKTALVVGGDAMARQVYRIQ 258
                 S+ Q+N P  +VLTPTREL +QVE E +K L KGL  K+  + GG     Q+  + 
Sbjct:   265 SQPVSRKQRNGPGMLVLTPTRELALQVEAECSKYLYKGL--KSVCIYGGGNRKGQIQDVT 322

Query:   259 QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-QI 317
             +GV++I+ TPGRL DL M + + L  I   VLDE D ML  GF  Q+M+I   +    Q 
Sbjct:   323 KGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQT 382

Query:   318 LMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN-KAVKQLAIWVESNKKKQKLFDILMS 376
             +M +A+      ++             G  ++     VKQ  I     +K+  + + L S
Sbjct:   383 VMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQS 442

Query:   377 KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVI 436
                     +V+V  +L AD LS+ +S+  G+   S+HG++   +R + +  F  G V ++
Sbjct:   443 LSP-KDKVIVFVSRKLVADDLSSDLSIQ-GIPVQSLHGDREQSDRDQALEDFRTGRVKIL 500

Query:   437 VATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQE 496
             +AT +  RG+++  V  V  ++ P +I+EYVH++GR  + G  G +I  V +++  +  E
Sbjct:   501 IATDLAARGLDVSDVTHVYNYNFPRNIEEYVHRVGRTGRAGKIGESITLVTQDDWKIADE 560

Query:   497 LVDILKSSGAGIPREL 512
             L+ IL+ +   +P  L
Sbjct:   561 LIKILQRANQIVPPSL 576


>TAIR|locus:2037416 [details] [associations]
            symbol:RCF1 "regulator of CBF gene expression 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
            HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
            RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
            ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
            EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
            KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
            TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
            ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
            Uniprot:Q8H0U8
        Length = 1166

 Score = 526 (190.2 bits), Expect = 1.8e-49, P = 1.8e-49
 Identities = 138/507 (27%), Positives = 246/507 (48%)

Query:    13 DGVDDSQSDVKEWSKDQREALPEEPKCVICGRYGE--YICDETDDDVCSLECKQKLLCRV 70
             DG  DS+ + KE     ++   +    +I G   +  Y   + DDD    E  ++ + RV
Sbjct:   409 DGTLDSKMNGKESGDRPKKGFNKALGRIIQGEDSDSDYSEPKNDDDPSLDEDDEEFMKRV 468

Query:    71 ANAN-RGMRXXXXXXXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDA 129
                    +        E  P     FY+   D       +T  + ++ RK LE+ V G  
Sbjct:   469 KKTKAEKLSLVDHSKIEYEPFRKN-FYIEVKD----ISRMTQEEVNTYRKELELKVHGKD 523

Query:   130 VPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASF 189
             VP PI  +    L+ K+L  ++   Y+ P P+Q QA+P  +SG+  +  A TGSGKT  F
Sbjct:   524 VPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGF 583

Query:   190 LVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDA 249
             ++P++    +     + +   P+ +V+ PTREL  Q+    +   K L  +   V GG  
Sbjct:   584 VLPMLRHIKDQPPVEAGD--GPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSG 641

Query:   250 MARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIR---MFVLDEVDCMLQRGFRDQVM 306
             +A+Q+  +++G E++V TPGR+ID+L     ++ ++R     V+DE D M   GF  Q+ 
Sbjct:   642 VAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQIT 701

Query:   307 QIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNK 365
             +I + I    Q +++SAT  ++VE +             G  ++ NK + QL      + 
Sbjct:   702 RIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESD 761

Query:   366 KKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIM 425
             +  +L ++L  +       +V+V S+   D L   + + +    LS+HG K   +R   +
Sbjct:   762 RFLRLLELL-GEWSEKGKILVFVQSQEKCDALYRDM-IKSSYPCLSLHGGKDQTDRESTI 819

Query:   426 RSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVF 485
               F      +++AT +  RG+++  +  V+ FD PN  ++YVH++GR  + G +G A+ F
Sbjct:   820 SDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTF 879

Query:   486 VNEENKNLFQELVDILKSSGAGIPREL 512
             ++E++     +LV  L+ S   +P +L
Sbjct:   880 ISEDDAKYAPDLVKALELSEQPVPDDL 906


>FB|FBgn0015331 [details] [associations]
            symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
            "establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
            system development" evidence=NAS] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
            evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
            GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
            EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
            ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
            MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
            EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
            UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
            OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
            NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
        Length = 619

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 144/511 (28%), Positives = 248/511 (48%)

Query:    16 DDSQS--DVKEWSKDQREALPE---EPKCVICGRYGEYICDETDDDVCSLE--CKQKLLC 68
             DDSQ   DV+ W +    +L +   E K +   +    +  +  ++   +E   +QK L 
Sbjct:    64 DDSQGAHDVETWGRKYNISLLDQHTELKKIAEAKKLSAVEKQLREEEKIMESIAQQKALM 123

Query:    69 RVANANRGMRXXXXXXXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGD 128
              VA   +G++          P      Y+RE  E          + +++R  L I V+G+
Sbjct:   124 GVAELAKGIQYEQPIKTAWKPPR----YIREMSEE---------EREAVRHELRILVEGE 170

Query:   129 AVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTAS 188
                 PI SF      + +L  + A G   PTP+Q+Q +P+ L+G+ L+  A TGSGKT  
Sbjct:   171 TPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLV 230

Query:   189 FLVPVISQCAN--IRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGK-----GLP-FK 240
             F++PVI         L   +N+  P  +++ P+REL  Q  E  +   K     G+P  +
Sbjct:   231 FVLPVIMFALEQEYSLPFERNE-GPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIR 289

Query:   241 TALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRG 300
             + L +GG  ++  +  I +GV ++V TPGRL+D+L K  + LD  R   +DE D M+  G
Sbjct:   290 SCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMG 349

Query:   301 FRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAI 359
             F + V  IF       Q L++SAT+ ++++               G+    +  V Q   
Sbjct:   350 FEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVE 409

Query:   360 WVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMK 419
             +V+   K   L D L   Q   PP +++   +   D +   + +  G++A++IHG K  +
Sbjct:   410 YVKQEAKVVYLLDCL---QKTAPPVLIFAEKKQDVDCIHEYL-LLKGVEAVAIHGGKDQE 465

Query:   420 ERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDE 479
             ER   + ++ VG+  V+VAT +  +G++   V+ VI +DMP+ I+ YVH+IGR  +   +
Sbjct:   466 ERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTK 525

Query:   480 GTAIVFVNEENK-NLFQELVDILKSSGAGIP 509
             G A   +N+  + ++  +L  +L      +P
Sbjct:   526 GLATTLINKTTEQSVLLDLKHLLIEGKQEVP 556


>UNIPROTKB|Q3AFI3 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 118/378 (31%), Positives = 203/378 (53%)

Query:   137 FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 196
             F    L   LL+ +   G++MPTP+Q +AIP  L G +L+  A TG+GKTA++L+PV+ +
Sbjct:     4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63

Query:   197 CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYR 256
                      Q  K    +++TPTREL +QV ++   LGK L  +   V GG A+ RQ+  
Sbjct:    64 I--------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRG 115

Query:   257 IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LP 315
             ++QGVE+IVGTPGR++D + +      +I++ +LDE D ML  GF D +  I   ++   
Sbjct:   116 LRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQ 175

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q L++SAT+   ++ +                     A++Q+   +   +K + L  IL 
Sbjct:   176 QTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILN 235

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
             S+      A+V+  ++   D +   ++   G  A  +HG+   +ER + ++SF  G+  +
Sbjct:   236 SELPIQ--AIVFCRTKKRVDEVVEQLNFR-GYAAKGLHGDMSQRERTQTIKSFKAGKTEL 292

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT +  RG+++  V  VI FD+P + + Y+H+IGR  + G EG AI  +N   + L +
Sbjct:   293 LVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLK 352

Query:   496 ELVDILKSSGAGIPRELI 513
              + + +      + RE++
Sbjct:   353 AIEEAINKR---LKREIL 367


>TIGR_CMR|CHY_0229 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 118/378 (31%), Positives = 203/378 (53%)

Query:   137 FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 196
             F    L   LL+ +   G++MPTP+Q +AIP  L G +L+  A TG+GKTA++L+PV+ +
Sbjct:     4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63

Query:   197 CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYR 256
                      Q  K    +++TPTREL +QV ++   LGK L  +   V GG A+ RQ+  
Sbjct:    64 I--------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRG 115

Query:   257 IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-LP 315
             ++QGVE+IVGTPGR++D + +      +I++ +LDE D ML  GF D +  I   ++   
Sbjct:   116 LRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQ 175

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q L++SAT+   ++ +                     A++Q+   +   +K + L  IL 
Sbjct:   176 QTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILN 235

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
             S+      A+V+  ++   D +   ++   G  A  +HG+   +ER + ++SF  G+  +
Sbjct:   236 SELPIQ--AIVFCRTKKRVDEVVEQLNFR-GYAAKGLHGDMSQRERTQTIKSFKAGKTEL 292

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT +  RG+++  V  VI FD+P + + Y+H+IGR  + G EG AI  +N   + L +
Sbjct:   293 LVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLK 352

Query:   496 ELVDILKSSGAGIPRELI 513
              + + +      + RE++
Sbjct:   353 AIEEAINKR---LKREIL 367


>DICTYBASE|DDB_G0275443 [details] [associations]
            symbol:helB1 "putative RNA splicing factor"
            species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
            reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
            GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
            EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
            ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
            GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
            ProtClustDB:CLSZ2500419 Uniprot:Q553B1
        Length = 1151

 Score = 513 (185.6 bits), Expect = 2.9e-49, Sum P(2) = 2.9e-49
 Identities = 119/413 (28%), Positives = 220/413 (53%)

Query:   113 QTDSLRKRLEINVK--GDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSAL 170
             +T+ L  R E+ VK  G   P PI S++   L++K+   ++   Y+ PT +Q Q IP+ +
Sbjct:   485 ETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIM 544

Query:   171 SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQA 230
             +G+ L+  A TGSGKT +FL+P+      +    S   +  +A++++PTREL +Q+  + 
Sbjct:   545 NGRDLIGIARTGSGKTLAFLLPMFRHI--LAQPKSAPGEGMIALIMSPTRELALQIHVEC 602

Query:   231 KLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIR---M 287
             K   K L  +TA V GG +++ Q+  +++G +++V TPGR+ID+L  ++  + ++R    
Sbjct:   603 KKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTF 662

Query:   288 FVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGK 346
              VLDE D M   GF  Q+  I  +I    Q +M+SAT   +VE +             G 
Sbjct:   663 LVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAGG 722

Query:   347 PNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTG 406
              ++ +  ++Q      +  + ++L ++L    H     +++   +   D L   +S  + 
Sbjct:   723 RSIVSSDIEQFVEVRPTETRFRRLIELLSIWYH-KGQILIFTNRQETTDNLYRQLS-NSQ 780

Query:   407 MKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEY 466
              + LS+HG K   +R E +  F      +++AT +  RG+++  +  V+ FD P+ +++Y
Sbjct:   781 YQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDY 840

Query:   467 VHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL--INSRY 517
             VH++GR  + G+ GTA  F+  + +     ++  L+ SG+ +P EL  +N  Y
Sbjct:   841 VHRVGRTGRAGNRGTAYTFITPDEERFSSSIIKALEQSGSKVPDELRKLNDTY 893

 Score = 39 (18.8 bits), Expect = 2.9e-49, Sum P(2) = 2.9e-49
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query:    52 ETDDDVCSLECKQKLLCRVANAN 74
             E DDD+  L+   + L + AN N
Sbjct:   396 EEDDDIDPLDAYMENLNKEANLN 418


>TIGR_CMR|CPS_1418 [details] [associations]
            symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
            GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
            BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
        Length = 401

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 125/381 (32%), Positives = 205/381 (53%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SFS+  LS  +L  I   GY  PT +Q +AIP  L+GK ++ +A TG+GKTASF++P++
Sbjct:     1 MSFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLL 60

Query:   195 SQCANIRLHHSQNQ---KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMA 251
              Q  N +   +  +   K   A++L PTREL +QVE       K L   +  + GG    
Sbjct:    61 EQL-NSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQ 119

Query:   252 RQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRA 311
              Q  R+  GV+++V TPGRL+D+  +  +  D++ M VLDE D ML  GF D + +I   
Sbjct:   120 EQKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIER 179

Query:   312 I-SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKL 370
             +    Q L++SAT+S+EV  +             G        ++Q  + V+   K   L
Sbjct:   180 LPEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKSALL 239

Query:   371 FDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
               I+ + Q++   A++++ ++ GA  L + +    G+ A SIH  +    R +I+  F  
Sbjct:   240 SHIITT-QNWQQ-ALIFIETKHGAAKLVSQLE-KRGIVAESIHSGRAQDIREKILNDFKS 296

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN 490
             G++  +VAT I  RG+++  + +VI +D+P  + +Y+H+IGR  + G  G AI  V+++N
Sbjct:   297 GKIKFLVATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAISLVSKDN 356

Query:   491 KNLFQELVDILKSSGAGIPRE 511
                F+EL  I    G  I R+
Sbjct:   357 ---FRELCAIESRLGHIIERK 374


>TAIR|locus:2130918 [details] [associations]
            symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
            OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
            PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
            ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
            PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
            KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
            PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
            GermOnline:AT4G16630 Uniprot:Q9ZRZ8
        Length = 789

 Score = 492 (178.3 bits), Expect = 3.8e-49, Sum P(2) = 3.8e-49
 Identities = 121/421 (28%), Positives = 215/421 (51%)

Query:    96 YVRESDENSGFQSLTIGQTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGY 155
             Y+ E DE + ++       D+  K     V G +  A   +F   +LS+ LL+  E  GY
Sbjct:   135 YLSEDDEAAEYKP-----EDATPKPFFSTVDGVSFHAD--TFMELNLSRPLLRACETLGY 187

Query:   156 DMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMV 215
               PTP+Q   IP AL+G+ L  SA TGSGKTA+F +P + +     L   +       ++
Sbjct:   188 KKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERL----LFRPKRVFATRVLI 243

Query:   216 LTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLL 275
             LTPTREL +Q+    + L +    K  L+VGG ++  Q   ++   +++V TPGR+ID L
Sbjct:   244 LTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHL 303

Query:   276 MKH-DIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMXX 333
                  ++LDD+ + +LDE D +LQ GF  ++ ++ R      Q +++SAT+++EV+++  
Sbjct:   304 RNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVK 363

Query:   334 XXXXXXXXXXXG-KPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRL 392
                              P    +++     + +  Q+   + +  + F    +++ G++ 
Sbjct:   364 LSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQ 423

Query:   393 GADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVR 452
              A  L     +  G+KA  +HG     +R + +  F   EV  ++AT +  RG++++GV+
Sbjct:   424 AAHRLKILFGLA-GLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQ 482

Query:   453 QVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512
              VI +  P  I  YVH++GR ++ G EG A+ FV + +++L +    I K  G+ +   +
Sbjct:   483 TVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKV---IAKKVGSKLKSRV 539

Query:   513 I 513
             I
Sbjct:   540 I 540

 Score = 48 (22.0 bits), Expect = 3.8e-49, Sum P(2) = 3.8e-49
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query:    16 DDSQSDVKEWSKDQREALPEEPKCVICGRYGEYICDETDDD 56
             D S+ DVKE   ++ EA  +E         GE   +E DDD
Sbjct:    23 DSSEEDVKEGEAEEHEAGEDED--------GEEEYEEEDDD 55


>UNIPROTKB|F1RSJ7 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
            Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
        Length = 941

 Score = 519 (187.8 bits), Expect = 5.3e-49, P = 5.3e-49
 Identities = 117/391 (29%), Positives = 200/391 (51%)

Query:   125 VKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSG 184
             V G A P P  SF+     ++L+  I  + Y  PTP+Q Q +P ALSG+ ++  A TGSG
Sbjct:   243 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSG 302

Query:   185 KTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALV 244
             KTA+F+ P++    + +    +    P+A+++ PTRELC Q+  + K  GK    ++  V
Sbjct:   303 KTAAFIWPMLIHIMDQK--ELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV 360

Query:   245 VGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQ 304
              GG +M  Q   +Q+G E++V TPGRLID + K    L  +   V DE D M   GF  Q
Sbjct:   361 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ 420

Query:   305 VMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVES 363
             V  I   +    Q L++SAT  +++EK+             G     N+ V Q+   + S
Sbjct:   421 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS 480

Query:   364 NKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERRE 423
                K       + +   +   +++V  +  A+ L+N +    G     +HG+    ER +
Sbjct:   481 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLK-QEGHNLGLLHGDMDQSERNK 539

Query:   424 IMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAI 483
             ++  F   ++PV+VAT +  RG+++  ++ VI +D+   I  + H+IGR  + G++G A 
Sbjct:   540 VISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAY 599

Query:   484 VFVNEENKNLFQELVDILKSSGAGIPRELIN 514
               +  ++ N   +LV  L+ +   + +EL++
Sbjct:   600 TLLTPKDSNFAGDLVRNLEGANQHVSKELLD 630


>UNIPROTKB|Q0C354 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
            GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
            BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
        Length = 464

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 116/384 (30%), Positives = 203/384 (52%)

Query:   134 ILS-FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVP 192
             I+S F S  L+ ++L ++  AGY  PTP+Q QAIP  + G+ ++  A TG+GKT +F  P
Sbjct:     5 IMSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAP 64

Query:   193 VISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMAR 252
             ++ + +  R       +    +VL PTREL  Q+       G GL  +  +V GG  +  
Sbjct:    65 ILDRLS--RNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGG 122

Query:   253 QVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI 312
             Q+ ++++G  ++V TPGRLIDL+ +  + LD +   +LDE D ML  GF   +  I + +
Sbjct:   123 QIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNV 182

Query:   313 -SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLF 371
              S  Q L +SAT+ + VE +               P      ++Q   +VE  +K   L 
Sbjct:   183 PSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASLLI 242

Query:   372 DILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG 431
             + +   +     A+V+  ++ GAD +   ++    + +++IHG K   +R + + +F  G
Sbjct:   243 EKIRDPE--LRSAIVFTRTKHGADGVVKRLA-KADIDSVAIHGNKSQSQREKALEAFKAG 299

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
              VP++VAT I  RG+ +  +  VI +D+P+  +++VH+IGR ++ G+ G AI F + + +
Sbjct:   300 RVPILVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDER 359

Query:   492 ---NLFQELVDI-LKSSGAGIPRE 511
                   ++L  + L  +G  +P E
Sbjct:   360 PTLRAIEKLTGLKLAPNGVSLPDE 383


>WB|WBGene00010260 [details] [associations]
            symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
            RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
            STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
            EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
            EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
            KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
            WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
            ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
        Length = 561

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 131/456 (28%), Positives = 226/456 (49%)

Query:    71 ANANRGMRXXXXX-XXERLPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGDA 129
             +N + G R        E L   ++ FY     EN+        + D      ++ ++G  
Sbjct:    69 SNGSAGGRLRDVDWSAENLTPIEKDFY----HENAAVSRREQYEIDQWVSANQVTLEGRG 124

Query:   130 VPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASF 189
             VP P+  F+   L  ++ + +    +  PT +Q  + P A+SG+ ++  A TGSGKT +F
Sbjct:   125 VPRPVFEFNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAF 183

Query:   190 LVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDA 249
             ++P +      +  H Q  + P  +VL PTREL  QV+E +      L  K   + GG +
Sbjct:   184 MLPALVHIT--KQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGAS 241

Query:   250 MARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIF 309
                Q   +++GV+++V TPGRL+D L      +      VLDE D ML  GF  Q+ +I 
Sbjct:   242 KGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKII 301

Query:   310 RAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESNKKK 367
               I    Q LM+SAT  +EV  +             G   +  N  + Q+   +E + K+
Sbjct:   302 GQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQ 361

Query:   368 QKLFDIL---MSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREI 424
              KL ++L   M+++      +++V ++  AD L+ A+    G   L IHG+K   ER  +
Sbjct:   362 AKLMELLNHIMNQKECK--TIIFVETKRKADELTRAMR-RDGWPTLCIHGDKNQGERDWV 418

Query:   425 MRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIV 484
             ++ F  G+ P+++AT +  RG+++  ++ VI +D PN+ ++YVH+IGR  +   +GTA  
Sbjct:   419 LQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYT 478

Query:   485 FVNEENKNLFQELVDILKSSGAGIP---RELINSRY 517
             F    N +  ++L+ +L  +   +P   R++ N  Y
Sbjct:   479 FFTHTNASKAKDLLKVLDEAKQTVPQALRDMANRSY 514


>UNIPROTKB|E1BII7 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
            EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
            Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
        Length = 647

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 135/444 (30%), Positives = 226/444 (50%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGD--------AVPAPILSFSS 139
             LP   + FY+ ES++ S   S++  Q D+ RK    N+  D         +P P  +F  
Sbjct:   190 LPPVKKNFYI-ESEKTS---SMSQEQVDNWRKE-NYNIICDDLKDGEKRPLPNPTCNFED 244

Query:   140 C-SLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVP-VISQC 197
                   ++++NIE AG+  PTP+Q QA P  L G  L+  A TG+GKT S+L+P  I   
Sbjct:   245 AFHCYPEVMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHID 304

Query:   198 ANIRLHHSQNQKNPLAMVLTPTRELCIQVE-EQAKLLGKGLPFKTALVVGGDAMARQVYR 256
             +   L  ++N   P  +VLTPTREL +QV+ E ++   +GL  K+  + GG     Q+  
Sbjct:   305 SQPVLQRARN--GPGMLVLTPTRELALQVDAECSEYSYRGL--KSVCIYGGGDRDGQIKD 360

Query:   257 IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP- 315
             + +G ++I+ TPGRL DL M + + L  I   VLDE D ML  GF  Q+M+I   +    
Sbjct:   361 LSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDR 420

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q +M SAT    V ++             G  ++   +     I V +  +K+      +
Sbjct:   421 QTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKRSHIQAFI 480

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
                      +++V  +  AD LS+ + +   +   S+HG +   +R   ++SF  G+V +
Sbjct:   481 DSMSPKDKVIIFVSRKAVADHLSSDLGIRR-ISVESLHGNREQSDRERALKSFKTGKVRI 539

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             ++AT +  RG+++  V  V  +D P +I+EYVH++GR  + G  G +I  +   +  +  
Sbjct:   540 LIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRNDWKIAG 599

Query:   496 ELVDILKSSGAGIPRELIN--SRY 517
             EL++IL+ +   +P +L++   RY
Sbjct:   600 ELINILERANQSVPEDLVSMAERY 623


>TIGR_CMR|CPS_2658 [details] [associations]
            symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
            ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
            PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
            Uniprot:Q480Z7
        Length = 399

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 118/374 (31%), Positives = 196/374 (52%)

Query:   137 FSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQ 196
             F + SL + ++  +   GY  PTP+Q + IP+ ++G  LL  A TG+GKTA+F +P+I++
Sbjct:     4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63

Query:   197 CANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYR 256
                 ++      K+  +++LTPTREL  Q+ +       GL  KT +V GG     QV  
Sbjct:    64 FGRNKI--DIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDS 121

Query:   257 IQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP- 315
             I+ G++++V TPGRL+DL+   DI    + +FVLDE D ML  GF   V  I   +    
Sbjct:   122 IELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSR 181

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q L++SAT+  E+E +                 +    V Q    ++ + K   LF+IL 
Sbjct:   182 QTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPLLFNILT 241

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
                +     +++  ++ GAD++  A+   + + A S+H  K    R E +++F    + V
Sbjct:   242 KADY--EKVLIFCKTKYGADIIVKALEKAS-ITAASLHSGKTQAVREEALQNFKDSTLRV 298

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT +  RG+++  +  VI +++P   + Y+H+IGR ++ G  G AI F  E   N  +
Sbjct:   299 LVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVE---NDIR 355

Query:   496 ELVDILKSSGAGIP 509
             +L +I  S G  IP
Sbjct:   356 QLTNIENSIGQVIP 369


>UNIPROTKB|F1S0I6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
            EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
            Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
        Length = 650

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 144/448 (32%), Positives = 225/448 (50%)

Query:    88 LPATDECFYVRESDENSGFQSLTIGQTDSLRKRLEINVKGD--------AVPAPILSFSS 139
             LP   + FY+ ES+  S   S++  Q  + RK    N+  D         +P P   F  
Sbjct:   190 LPLIKKNFYM-ESEITS---SMSQEQVQNWRKE-NYNIMCDDLKDGEKRPIPNPACKFED 244

Query:   140 C-SLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVP----VI 194
                   +++ NI+ AG+  PTP+Q QA P  L G  L+  A TG+GKT S+L+P    V 
Sbjct:   245 AFQCYPEVMINIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHVD 304

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVE-EQAKLLGKGLPFKTALVVGGDAMARQ 253
             SQ     L  ++N   P  +VLTPTREL +QVE E +K   KGL  K+  V GG     Q
Sbjct:   305 SQPVVFSLQRARN--GPGMLVLTPTRELALQVEAECSKYSYKGL--KSVCVYGGGDRDGQ 360

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS 313
             +  + +GV++I+ TPGRL DL M + + L  I   VLDE D ML  GF  Q+M+I   I 
Sbjct:   361 IKDLLKGVDIIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQIMKILLDIR 420

Query:   314 LP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN-KAVKQLAIWVESNKKKQKLF 371
                Q +M SAT    V ++             G  ++     VKQ  I    ++K+  + 
Sbjct:   421 PDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKRSHIQ 480

Query:   372 DILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG 431
               + S        +++V  +  AD LS+ + +   +   S+HG +   +R   +++F  G
Sbjct:   481 TFIESMSP-KDKVIIFVSRKAVADHLSSDLGIRH-ISVESLHGNREQGDRERALKNFKTG 538

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
             +V +++AT +  RG+++  V  V  +D P +I+EYVH++GR  + G  G +I  +   + 
Sbjct:   539 KVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRSDW 598

Query:   492 NLFQELVDILKSSGAGIPRELIN--SRY 517
              +  EL+ IL+ +   IP +L+    RY
Sbjct:   599 KIAGELIHILERANQSIPEDLVEMAERY 626


>UNIPROTKB|Q8EBV7 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 108/369 (29%), Positives = 201/369 (54%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SFS+ SL+ +L+  +   GY  PTP+Q++AIP+ L+ + ++  A TG+GKTA+F +P++
Sbjct:     1 MSFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPIL 60

Query:   195 SQC-ANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253
                 A+ +  H+   K   A+VL PTREL +QV++      KG   +  +  GG ++  Q
Sbjct:    61 QLLMADNQSDHAA--KAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQ 118

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS 313
                   G+++++ TPGRL+D L +  + L+ +   V DE D ML  GF D++  + + + 
Sbjct:   119 QAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVP 178

Query:   314 LP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                Q L++SAT+   +                 KPN     ++Q    ++S++K + +  
Sbjct:   179 AQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTEFVSH 238

Query:   373 ILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
             ++ SK       +++  ++ G D L+  ++   G+   S HG+     R ++++ F  G 
Sbjct:   239 LVRSKNW--QQVLIFSRTKQGVDKLTAQLN-KLGVATQSFHGDLSQGAREKVLQEFKQGL 295

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492
             V V+VAT +  RG+++  ++ VI F++P   ++Y+H+IGR  + G  G AI   ++E+  
Sbjct:   296 VQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDAL 355

Query:   493 LFQELVDIL 501
             L +E+  +L
Sbjct:   356 LLEEVETLL 364


>TIGR_CMR|SO_3388 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 108/369 (29%), Positives = 201/369 (54%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             +SFS+ SL+ +L+  +   GY  PTP+Q++AIP+ L+ + ++  A TG+GKTA+F +P++
Sbjct:     1 MSFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPIL 60

Query:   195 SQC-ANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253
                 A+ +  H+   K   A+VL PTREL +QV++      KG   +  +  GG ++  Q
Sbjct:    61 QLLMADNQSDHAA--KAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQ 118

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS 313
                   G+++++ TPGRL+D L +  + L+ +   V DE D ML  GF D++  + + + 
Sbjct:   119 QAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVP 178

Query:   314 LP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                Q L++SAT+   +                 KPN     ++Q    ++S++K + +  
Sbjct:   179 AQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTEFVSH 238

Query:   373 ILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
             ++ SK       +++  ++ G D L+  ++   G+   S HG+     R ++++ F  G 
Sbjct:   239 LVRSKNW--QQVLIFSRTKQGVDKLTAQLN-KLGVATQSFHGDLSQGAREKVLQEFKQGL 295

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492
             V V+VAT +  RG+++  ++ VI F++P   ++Y+H+IGR  + G  G AI   ++E+  
Sbjct:   296 VQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDAL 355

Query:   493 LFQELVDIL 501
             L +E+  +L
Sbjct:   356 LLEEVETLL 364


>WB|WBGene00018776 [details] [associations]
            symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
            GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
            HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
            RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
            PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
            KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
            InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
        Length = 970

 Score = 513 (185.6 bits), Expect = 2.6e-48, P = 2.6e-48
 Identities = 124/425 (29%), Positives = 228/425 (53%)

Query:    95 FYVRESDENSGFQSLTIGQTDSLRKRLE-INVKGDAVPAPILSFSSCSLSQKLLQNIEAA 153
             FY+ E++E    + +T  +  + R+ L+ I VKG   P PI +++ C ++ K++  ++  
Sbjct:   267 FYI-ETEE---IRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322

Query:   154 GYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLA 213
              Y  PT +Q QAIPS +SG+ ++  A TGSGKT +FL+P+     +      +    P+A
Sbjct:   323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILD--QPELEEGDGPIA 380

Query:   214 MVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLID 273
             ++L PTREL +Q  ++A    K L  K A   GG  ++ Q+  +++G E++V TPGR+ID
Sbjct:   381 VILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMID 440

Query:   274 LLMKHDIELDDIRM---FVLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVE 329
             +L  +  ++ ++R     VLDE D M  +GF  Q+M++   I    Q +++SAT  + +E
Sbjct:   441 VLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHME 500

Query:   330 KMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVG 389
              +             G  ++    + Q A+    ++K  KL ++L    +    ++V+V 
Sbjct:   501 ALARKVLDKPVEILVGGKSVVCSDITQNAVICAEHQKFLKLLELL-GMYYEEGSSIVFVD 559

Query:   390 SRLGADLLSNAISVTTGMKALS-IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVEL 448
              +  AD + + + + TG  +++ +HG     +R   +  F  G + V+VAT +  RG+++
Sbjct:   560 KQEKADDIVDQL-MRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDV 618

Query:   449 LGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV-NEENKNLFQELVDILKSSGAG 507
               +  V+ +D PN  ++YVH++GR  + G +G A  FV  E  + +  E+    +++G  
Sbjct:   619 KNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEKMAGEICRAFETAGCK 678

Query:   508 IPREL 512
              P +L
Sbjct:   679 PPADL 683


>FB|FBgn0263231 [details] [associations]
            symbol:bel "belle" species:7227 "Drosophila melanogaster"
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
            development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
            [GO:0016442 "RNA-induced silencing complex" evidence=IDA]
            [GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
            particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
            GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
            GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
            RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
            SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
            EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
            UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
            OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
            NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
        Length = 798

 Score = 509 (184.2 bits), Expect = 2.8e-48, P = 2.8e-48
 Identities = 107/316 (33%), Positives = 182/316 (57%)

Query:   204 HSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
             +S+ ++ PL +VL PTREL  Q+ E+AK        + A++ GG+  + Q+  + +G  L
Sbjct:   372 YSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHL 431

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QIL 318
             IV TPGRL D++ +  + L++IR  VLDE D ML  GF  Q+ +I   +++P     Q L
Sbjct:   432 IVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTL 491

Query:   319 MYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQ 378
             M+SAT  ++++++             G+    ++ + Q  +WV    K+  L D+L S +
Sbjct:   492 MFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIR 551

Query:   379 ---HFTPPAV--VYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
                 +T  ++  ++V ++ GAD L   +         SIHG++  KER E +R F  G+ 
Sbjct:   552 DGPEYTKDSLTLIFVETKKGADSLEEFL-YQCNHPVTSIHGDRTQKEREEALRCFRSGDC 610

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
             P++VAT +  RG+++  V+ VI FD+P+ ++EYVH+IGR  +MG+ G A  F NE+N+N+
Sbjct:   611 PILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNI 670

Query:   494 FQELVDILKSSGAGIP 509
               +L+++L  +   IP
Sbjct:   671 CSDLLELLIETKQEIP 686

 Score = 429 (156.1 bits), Expect = 1.7e-39, P = 1.7e-39
 Identities = 99/292 (33%), Positives = 157/292 (53%)

Query:   101 DENSGFQSLTIGQTD-SLRKRLEINVK--GDAVPAPILSFSSCSLSQKLLQNIEAAGYDM 157
             DE    +   +G T  +  K  +I V+  G  VP  I SF    L++ +  N+  A YD 
Sbjct:   258 DERLEVELFGVGNTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDK 317

Query:   158 PTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANI--------RLHHSQNQK 209
             PTPVQ  AIP  ++G+ L+  A TGSGKTA+FLVP+++Q   +           +S+ ++
Sbjct:   318 PTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQ 377

Query:   210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPG 269
              PL +VL PTREL  Q+ E+AK        + A++ GG+  + Q+  + +G  LIV TPG
Sbjct:   378 YPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPG 437

Query:   270 RLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMYSATI 324
             RL D++ +  + L++IR  VLDE D ML  GF  Q+ +I   +++P     Q LM+SAT 
Sbjct:   438 RLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATF 497

Query:   325 SQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMS 376
              ++++++             G+    ++ + Q  +WV    K+  L D+L S
Sbjct:   498 PKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSS 549


>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
            symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
            RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
            Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
            OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
        Length = 709

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 106/319 (33%), Positives = 182/319 (57%)

Query:   206 QNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIV 265
             + ++ P+++VL PTREL +Q+ ++A+        +  +V GG  + +Q+  +++G  L+V
Sbjct:   310 RRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 369

Query:   266 GTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QILMY 320
              TPGRL+D++ +  I LD  +  VLDE D ML  GF  Q+ +I    ++P     Q +M+
Sbjct:   370 ATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMF 429

Query:   321 SATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMS--KQ 378
             SAT  +E++ +             G+    ++ + Q  +WVE N K+  L D+L +  K 
Sbjct:   430 SATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKD 489

Query:   379 HFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVA 438
               T   +V+V ++ GAD L + +    G    SIHG++  ++R E +  F  G  P++VA
Sbjct:   490 SLT---LVFVETKKGADALEDFL-YREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVA 545

Query:   439 TGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELV 498
             T +  RG+++  V+ VI FD+P+ I+EYVH+IGR  ++G+ G A  F N++N N+ ++L+
Sbjct:   546 TAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNITKDLL 605

Query:   499 DILKSSGAGIPRELINSRY 517
             DIL  +   +P  L N  Y
Sbjct:   606 DILVEAKQEVPSWLENLAY 624

 Score = 305 (112.4 bits), Expect = 2.7e-24, P = 2.7e-24
 Identities = 73/211 (34%), Positives = 113/211 (53%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G   P  I SF    + + ++ NI  + Y  PTPVQ  AIP   + + L+  A 
Sbjct:   209 IPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQ 268

Query:   181 TGSGKTASFLVPVISQC-------ANIRLHHSQNQKN---------PLAMVLTPTRELCI 224
             TGSGKTA+FL+PV+SQ        A      S  Q+N         P+++VL PTREL +
Sbjct:   269 TGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQENGKYVRRKQYPISLVLAPTRELAL 328

Query:   225 QVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDD 284
             Q+ ++A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD 
Sbjct:   329 QIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDY 388

Query:   285 IRMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315
              +  VLDE D ML  GF  Q+ +I    ++P
Sbjct:   389 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMP 419


>UNIPROTKB|B7ZBU3 [details] [associations]
            symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
            HOVERGEN:HBG015893 EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
            IPI:IPI00916009 SMR:B7ZBU3 Ensembl:ENST00000433235
            HOGENOM:HOG000200515 Uniprot:B7ZBU3
        Length = 224

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 98/223 (43%), Positives = 146/223 (65%)

Query:   296 MLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAV 354
             ML+ GF+ QV+ I   I    Q ++ SATI   +E++             G+ N+P   V
Sbjct:     1 MLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANV 60

Query:   355 KQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHG 414
             +Q+ +WVE   KK+KLF+IL  K+ F PP +V+V  +LGADLLS A+   TG+K++SIH 
Sbjct:    61 RQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHS 120

Query:   415 EKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRAS 474
             EK   ER+ I++  L G+  V+V+TG+LGRG++L+ VR V+ FDMP+S+ EYVHQIGR  
Sbjct:   121 EKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVG 180

Query:   475 QMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSRY 517
             ++G  GTAI F+N  +K LF ++   +K +G+ +P +L+NS Y
Sbjct:   181 RLGQNGTAITFINNNSKRLFWDIAKRVKPTGSILPPQLLNSPY 223


>FB|FBgn0037549 [details] [associations]
            symbol:CG7878 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
            UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
            GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
            FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
            GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
        Length = 703

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 122/390 (31%), Positives = 203/390 (52%)

Query:   130 VPAPILSFSSCSLSQK-LLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTAS 188
             +P P+ +F  C      +L+ I   G+  P+P+Q QA P  L G  ++  A TG+GKT +
Sbjct:   277 IPNPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLA 336

Query:   189 FLVP-VISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLG-KGLPFKTALVVG 246
             FL+P +I          ++   N L  VL PTREL +Q+E + K    +G+  K   V G
Sbjct:   337 FLLPGMIHTEYQSTPRGTRGGANVL--VLAPTRELALQIEMEVKKYSFRGM--KAVCVYG 392

Query:   247 GDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVM 306
             G     Q+  +++G E+I+ TPGRL DL+M + I++  I   VLDE D ML  GF  Q+ 
Sbjct:   393 GGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIR 452

Query:   307 QIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP-NKAVKQLAIWVESN 364
             ++   I    Q +M SAT    V ++             G  ++    +VKQ+   +E +
Sbjct:   453 KVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDD 512

Query:   365 KKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREI 424
               K       +     T   +++ G ++ AD LS+ +++  G     IHG +   +R + 
Sbjct:   513 MDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLD-GFMTQCIHGNRDQMDREQA 571

Query:   425 MRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIV 484
             +     G V ++VAT +  RG+++  +  VI +D P++I+EYVH++GR  + G +GT+I 
Sbjct:   572 IADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSIS 631

Query:   485 FVNEENKNLFQELVDILKSSGAGIPRELIN 514
             F   E+  + +EL++IL+ +   +P EL N
Sbjct:   632 FFTREDWAMAKELIEILQEAEQEVPDELHN 661


>POMBASE|SPAC1F5.10 [details] [associations]
            symbol:SPAC1F5.10 "ATP-dependent RNA helicase
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
            GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
            OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
            ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
            EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
            NextBio:20802696 Uniprot:Q10055
        Length = 394

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 114/384 (29%), Positives = 207/384 (53%)

Query:   115 DSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKS 174
             D + + +E+    D V A + SF   +L + LL+ I A GY+ P+ VQ +AI     G+ 
Sbjct:     3 DEIMENVELTTSED-VNA-VSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRD 60

Query:   175 LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLG 234
             ++  A +G+GKTA+F + ++ Q  ++ +  +Q      A++L+PTREL +Q++     LG
Sbjct:    61 VIAQAQSGTGKTATFSIGIL-QSIDLSVRDTQ------ALILSPTRELAVQIQNVVLALG 113

Query:   235 KGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVD 294
               +  +    +GG ++   + ++  G  ++ GTPGR+ D++ + ++   +++M +LDE D
Sbjct:   114 DHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEAD 173

Query:   295 CMLQRGFRDQVMQIFRAISL-PQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKA 353
              +L +GF++Q+  I+R +    Q+++ SAT+ Q+V +M              +  +  + 
Sbjct:   174 ELLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEG 233

Query:   354 VKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIH 413
             +KQ  I VE  + K      L      T  AV++  SR   D L+  +         S+H
Sbjct:   234 LKQYFIAVEKEEWKFDTLCDLYDTLTITQ-AVIFCNSRRKVDWLTEKMR-EANFTVTSMH 291

Query:   414 GEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRA 473
             GE P KER  IM+ F  G   V++ T I  RG+++  V  VI +D+P + + Y+H+IGR+
Sbjct:   292 GEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRS 351

Query:   474 SQMGDEGTAIVFVNEENKNLFQEL 497
              + G +G AI FV  E+  + +++
Sbjct:   352 GRFGRKGVAINFVTNEDVRILRDI 375


>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
            symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
            IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
            Uniprot:F1QQ09
        Length = 473

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 124/406 (30%), Positives = 214/406 (52%)

Query:   115 DSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKS 174
             + +RK+  I V+G+ +PAPI SF      Q +L+ ++  G   PTP+Q+Q IP+ LSG+ 
Sbjct:    17 ERVRKKYHILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRD 76

Query:   175 LLVSANTGSGKTASFLVPVISQCANI--RLHHSQNQKNPLAMVLTPTRELCIQ-----VE 227
             ++  A TGSGKT  F +P+I  C     RL   + +  P  +++ P+  +        +E
Sbjct:    77 MIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKRE-GPYGLIICPSVNVAKHTHHGIIE 135

Query:   228 EQAKLL-GKGLP-FKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDI 285
                KLL  +G P  + AL +GG ++  Q+    + V+L   TPGRL+DLL K  + LD  
Sbjct:   136 YYCKLLEDEGAPQMRCALCIGGMSVKEQM----EVVKL--ATPGRLMDLLNKKMVSLDIC 189

Query:   286 RMFVLDEVDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXXXXXXX 344
             R   LDE D M+  GF + +  IF       Q L++SAT+ ++++               
Sbjct:   190 RYLALDEADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINV 249

Query:   345 GKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT 404
             G+    +  V Q    VE  K++ K+  +L   Q   PP +++   +   D +   + + 
Sbjct:   250 GRAGAASLDVIQE---VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYL-LL 305

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
              G++A++IHG K  +ER + + +F  G+  V+VAT +  +G++   ++ V+ +DMP  I+
Sbjct:   306 KGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGLDFPAIQHVVNYDMPEEIE 365

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIP 509
              YVH+IGR  + G  G A  F+N+  ++++  +L  +L  +   +P
Sbjct:   366 NYVHRIGRTGRSGKTGIATTFINKGCDESVLMDLKALLVEAKQKVP 411


>ZFIN|ZDB-GENE-980526-150 [details] [associations]
            symbol:pl10 "pl10" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
            EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
            ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
            CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
            Uniprot:Q6PBB2
        Length = 688

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 105/321 (32%), Positives = 182/321 (56%)

Query:   204 HSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVEL 263
             + + ++ P+++VL PTREL +Q+ ++A+        +  +V GG  + +Q+  +++G  L
Sbjct:   292 YGRRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHL 351

Query:   264 IVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP-----QIL 318
             +V TPGRL+D++ +  I LD     VLDE D ML  GF  Q+ +I    ++P     Q +
Sbjct:   352 LVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTM 411

Query:   319 MYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMS-- 376
             M+SAT  +E++ +             G+    ++ + Q  +WVE N K+  L D+L +  
Sbjct:   412 MFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATG 471

Query:   377 KQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVI 436
             K   T   +V+V ++ GAD L + +    G    SIHG++  ++R E +  F  G  P++
Sbjct:   472 KDSLT---LVFVETKKGADALEDFL-YREGYACTSIHGDRSQRDREEALHQFRSGRCPIL 527

Query:   437 VATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQE 496
             VAT +  RG+++  V+ VI FD+P+ I+EYVH+IGR  ++G+ G A  F N++N N+ ++
Sbjct:   528 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKD 587

Query:   497 LVDILKSSGAGIPRELINSRY 517
             L+DIL  +   +P  L +  Y
Sbjct:   588 LLDILVEAKQEVPSWLESLAY 608

 Score = 312 (114.9 bits), Expect = 3.9e-25, P = 3.9e-25
 Identities = 74/210 (35%), Positives = 114/210 (54%)

Query:   121 LEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSAN 180
             + +   G   P PI  F    + + ++ NI  + Y  PTPVQ  AIP   S + L+  A 
Sbjct:   194 IPVEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQ 253

Query:   181 TGSGKTASFLVPVISQC----ANIRLHHSQN--QKN---------PLAMVLTPTRELCIQ 225
             TGSGKTA+FL+PV+SQ         L  ++N  Q+N         P+++VL PTREL +Q
Sbjct:   254 TGSGKTAAFLLPVLSQIYTDGPGEALQAAKNSAQENGKYGRRKQYPISLVLAPTRELALQ 313

Query:   226 VEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDI 285
             + ++A+        +  +V GG  + +Q+  +++G  L+V TPGRL+D++ +  I LD  
Sbjct:   314 IYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLLDMMERGKIGLDYC 373

Query:   286 RMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315
                VLDE D ML  GF  Q+ +I    ++P
Sbjct:   374 NYLVLDEADRMLDMGFEPQIRRIVEQDTMP 403


>CGD|CAL0004095 [details] [associations]
            symbol:TIF species:5476 "Candida albicans" [GO:0003743
            "translation initiation factor activity" evidence=ISS] [GO:0006413
            "translational initiation" evidence=ISS] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
            EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
            ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
            GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
            Uniprot:P87206
        Length = 397

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 110/382 (28%), Positives = 201/382 (52%)

Query:   134 ILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPV 193
             +  F   +L   +++ I   GY+ P+ +Q +AI     G+ +L  A +G+GKTA+F +  
Sbjct:    22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISA 81

Query:   194 ISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253
             + +        ++N+K   A++L PTREL +Q++     +G  L       +GG +M+  
Sbjct:    82 LQRI-------NENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDD 134

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI- 312
             +   + GV+++VGTPGR++D++ +   + D ++MF+LDE D ML  GF++Q+  IFR + 
Sbjct:   135 IEAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLP 194

Query:   313 SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                QI++ SAT+ Q+V ++              K  +  + +KQ  I VE    K   FD
Sbjct:   195 ETTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYK---FD 251

Query:   373 IL--MSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
              L  +        AV++  +R   + L+N +         +IH + P  ER  IM+ F  
Sbjct:   252 CLCDLYDSISVTQAVIFCNTRSKVEFLTNKLR-EQHFTVSAIHADLPQAERDTIMKEFRS 310

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN 490
             G   ++++T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV + +
Sbjct:   311 GSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRD 370

Query:   491 KNLFQELVDILKSSGAGIPREL 512
               + +E+     +    +P ++
Sbjct:   371 VGMMREIEKFYSTQIEEMPADI 392


>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
            symbol:PF14_0655 "RNA helicase-1, putative"
            species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
            evidence=ISS] [GO:0003743 "translation initiation factor activity"
            evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
            [GO:0006446 "regulation of translational initiation" evidence=ISS]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
            GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
            RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
            IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
            GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
            ProtClustDB:PTZ00424 Uniprot:Q8IKF0
        Length = 398

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 115/359 (32%), Positives = 200/359 (55%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F +  L++KLL+ I + G++ P+ +Q + I   L+G   +  A +G+GKTA+F   VIS
Sbjct:    24 TFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATF---VIS 80

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
                 I   +   Q    A++L PTREL  Q+++    LG  L  K    VGG  +   + 
Sbjct:    81 SLQLINYDYVACQ----ALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDID 136

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315
             +++QGV ++VGTPGR+ D++ K  + +D +++F+LDE D ML RGF+ Q+ ++F+ + +P
Sbjct:   137 KLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKL-VP 195

Query:   316 --QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+ ++SAT+ QE+ ++              K  +  + ++Q  + VE  K++ KL  +
Sbjct:   196 DIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVE--KEEWKLDTL 253

Query:   374 LMSKQHFT-PPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
                 +  T   +++Y  +R   D+L+  +          +HG+   K+R  IMR F  G 
Sbjct:   254 CDLYETLTITQSIIYCNTRKKVDILTQEMHNRL-FTVSCMHGDMDQKDRDLIMREFRSGS 312

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
               V+V T +L RG+++  V  VI +D+P S   Y+H+IGR+ + G +G AI FV  ++K
Sbjct:   313 TRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDK 371


>UNIPROTKB|F1NVJ6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
            EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
            Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
        Length = 642

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 123/394 (31%), Positives = 207/394 (52%)

Query:   130 VPAPILSFSSC-SLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTAS 188
             +P P+  F         ++ NI   G+  PTP+Q QA P  L G  L+  A TG+GKT +
Sbjct:   234 IPNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLA 293

Query:   189 FLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQA-KLLGKGLPFKTALVVGG 247
             +L+P     A+  +   + +  P  +VL PTREL +QVE +  K   KG  FK+  + GG
Sbjct:   294 YLMPGFIHLASQPIPKDK-RGGPGMLVLAPTRELALQVEAECLKYTYKG--FKSICIYGG 350

Query:   248 DAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQ 307
                  Q+  + +GV++++ TPGRL DL M + I L  I  ++ +E D ML  GF  Q+M+
Sbjct:   351 GDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSIT-YLANEADRMLDMGFEPQIMK 409

Query:   308 IFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN-KAVKQLAIWVESNK 365
             I   +    Q +M SAT    V ++             G  ++     V+Q  I +   +
Sbjct:   410 ILIDVRPDRQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVIVINEEE 469

Query:   366 KKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIM 425
             KK  + + + S +     A+++VG +  AD +++ + V  G+   S+HG++   +R + +
Sbjct:   470 KKAFMENFIDSMKP-KDKAIIFVGKKSTADDIASDLGVQ-GVPVQSLHGDREQCDREQAL 527

Query:   426 RSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVF 485
               F  G+V ++VAT +  RG+++  +  V  FD P +I+EYVH++GR  + G  G A+  
Sbjct:   528 DDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTL 587

Query:   486 VNEENKNLFQELVDILKSSGAGIPRELIN--SRY 517
             + +++     EL+DIL+ +   +P ELI+   RY
Sbjct:   588 ITKKDWKAASELIDILQRAKQVVPDELISMAERY 621


>UNIPROTKB|P87206 [details] [associations]
            symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
            species:237561 "Candida albicans SC5314" [GO:0003743 "translation
            initiation factor activity" evidence=ISS] [GO:0006413
            "translational initiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
            GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
            EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
            ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
            GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
            Uniprot:P87206
        Length = 397

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 110/382 (28%), Positives = 201/382 (52%)

Query:   134 ILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPV 193
             +  F   +L   +++ I   GY+ P+ +Q +AI     G+ +L  A +G+GKTA+F +  
Sbjct:    22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISA 81

Query:   194 ISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253
             + +        ++N+K   A++L PTREL +Q++     +G  L       +GG +M+  
Sbjct:    82 LQRI-------NENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDD 134

Query:   254 VYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI- 312
             +   + GV+++VGTPGR++D++ +   + D ++MF+LDE D ML  GF++Q+  IFR + 
Sbjct:   135 IEAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLP 194

Query:   313 SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
                QI++ SAT+ Q+V ++              K  +  + +KQ  I VE    K   FD
Sbjct:   195 ETTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYK---FD 251

Query:   373 IL--MSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
              L  +        AV++  +R   + L+N +         +IH + P  ER  IM+ F  
Sbjct:   252 CLCDLYDSISVTQAVIFCNTRSKVEFLTNKLR-EQHFTVSAIHADLPQAERDTIMKEFRS 310

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN 490
             G   ++++T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV + +
Sbjct:   311 GSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRD 370

Query:   491 KNLFQELVDILKSSGAGIPREL 512
               + +E+     +    +P ++
Sbjct:   371 VGMMREIEKFYSTQIEEMPADI 392


>UNIPROTKB|Q8IKF0 [details] [associations]
            symbol:H45 "Helicase 45" species:36329 "Plasmodium
            falciparum 3D7" [GO:0006446 "regulation of translational
            initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
            GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
            RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
            IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
            GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
            ProtClustDB:PTZ00424 Uniprot:Q8IKF0
        Length = 398

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 115/359 (32%), Positives = 200/359 (55%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F +  L++KLL+ I + G++ P+ +Q + I   L+G   +  A +G+GKTA+F   VIS
Sbjct:    24 TFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATF---VIS 80

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
                 I   +   Q    A++L PTREL  Q+++    LG  L  K    VGG  +   + 
Sbjct:    81 SLQLINYDYVACQ----ALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDID 136

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315
             +++QGV ++VGTPGR+ D++ K  + +D +++F+LDE D ML RGF+ Q+ ++F+ + +P
Sbjct:   137 KLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKL-VP 195

Query:   316 --QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+ ++SAT+ QE+ ++              K  +  + ++Q  + VE  K++ KL  +
Sbjct:   196 DIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVE--KEEWKLDTL 253

Query:   374 LMSKQHFT-PPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
                 +  T   +++Y  +R   D+L+  +          +HG+   K+R  IMR F  G 
Sbjct:   254 CDLYETLTITQSIIYCNTRKKVDILTQEMHNRL-FTVSCMHGDMDQKDRDLIMREFRSGS 312

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
               V+V T +L RG+++  V  VI +D+P S   Y+H+IGR+ + G +G AI FV  ++K
Sbjct:   313 TRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDK 371


>UNIPROTKB|Q8EDC4 [details] [associations]
            symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
            GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
            Uniprot:Q8EDC4
        Length = 449

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 118/373 (31%), Positives = 197/373 (52%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + F+  SL Q+LLQ+++  G   PT +Q QA+P AL+GK L+ S+ TGSGKT +FL+P +
Sbjct:     1 MQFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              +  + R   + ++++P  ++L PTREL  QV  Q +LL     +K   V+GG+    Q 
Sbjct:    61 QRVISTR---ALSKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQA 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
               + +    IV TPGR+ D L + ++ L+ + + +LDE D ML  GF  Q+  I  A   
Sbjct:   118 KALAKEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAADH 177

Query:   315 P--QILMYSATISQ-EVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLF 371
                Q LM+SAT+   E+ ++             G  +  ++ + Q     +    K+ L 
Sbjct:   178 KRRQTLMFSATLDHSEINEIAAALLKNPLHVAIGTAHAEHQDISQRIYLCDHLDHKEALL 237

Query:   372 DILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG 431
               L+S +      +++  +R   + L+  +S   G    ++ GE     R +IM  F  G
Sbjct:   238 SRLLSDESHKQ-VIIFTATRADTERLAAKLSAQ-GFATAALSGELKQAARNQIMDQFARG 295

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
             +  ++V T +  RG++LL V  VI FDMP   +EYVH+IGR  + G +G AI  V  ++ 
Sbjct:   296 QQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDW 355

Query:   492 NLFQELVDILKSS 504
             + F+++   L+ +
Sbjct:   356 DSFKKVQLFLRKT 368


>TIGR_CMR|SO_2838 [details] [associations]
            symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
            GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
            Uniprot:Q8EDC4
        Length = 449

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 118/373 (31%), Positives = 197/373 (52%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + F+  SL Q+LLQ+++  G   PT +Q QA+P AL+GK L+ S+ TGSGKT +FL+P +
Sbjct:     1 MQFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              +  + R   + ++++P  ++L PTREL  QV  Q +LL     +K   V+GG+    Q 
Sbjct:    61 QRVISTR---ALSKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQA 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
               + +    IV TPGR+ D L + ++ L+ + + +LDE D ML  GF  Q+  I  A   
Sbjct:   118 KALAKEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAADH 177

Query:   315 P--QILMYSATISQ-EVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLF 371
                Q LM+SAT+   E+ ++             G  +  ++ + Q     +    K+ L 
Sbjct:   178 KRRQTLMFSATLDHSEINEIAAALLKNPLHVAIGTAHAEHQDISQRIYLCDHLDHKEALL 237

Query:   372 DILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG 431
               L+S +      +++  +R   + L+  +S   G    ++ GE     R +IM  F  G
Sbjct:   238 SRLLSDESHKQ-VIIFTATRADTERLAAKLSAQ-GFATAALSGELKQAARNQIMDQFARG 295

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
             +  ++V T +  RG++LL V  VI FDMP   +EYVH+IGR  + G +G AI  V  ++ 
Sbjct:   296 QQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDW 355

Query:   492 NLFQELVDILKSS 504
             + F+++   L+ +
Sbjct:   356 DSFKKVQLFLRKT 368


>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
            symbol:PFE0430w "ATP-dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
            RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
            MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
            KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
            HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
        Length = 1490

 Score = 509 (184.2 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 132/414 (31%), Positives = 211/414 (50%)

Query:   115 DSLRKRL-EINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGK 173
             D  RK    I V+G   P P+  F  C L  K+LQ +E   +     +QMQ IP+ + G+
Sbjct:   702 DMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGR 761

Query:   174 SLLVSANTGSGKTASFLVPVISQCANIRLHHS--QNQKNPLAMVLTPTRELCIQVEEQAK 231
              ++  A TGSGKT S+L PVI       LH    +N   P++++LTPTREL IQV+ +AK
Sbjct:   762 DVIAIAETGSGKTLSYLFPVIRHV----LHQEPLRNNDGPISIILTPTRELSIQVKNEAK 817

Query:   232 LLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIE---LDDIRMF 288
             +  K +  +   V GG  +ARQ+  +++GVE++VGTPGR+ID+L   + +   L+ +   
Sbjct:   818 IYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFV 877

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D +L  GF  Q+  I R      Q  M SAT    ++ M             G+ 
Sbjct:   878 VLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEK 937

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
                N  + Q    +E +KK  +L  +L     +    +++V  ++ ADLL   +      
Sbjct:   938 GKTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGL-VLIFVNKQIEADLLYLEL-YKYDY 995

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
               L +HG +   +R+  +  F   E  V++AT ++ RG+++  +  VI +  P+ I++Y+
Sbjct:   996 NLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCPDHIEDYI 1055

Query:   468 HQIGRASQMGDEGTAIVFV--NEENK-----NLFQELVDILKSSGAGIPRELIN 514
             H+IGR  +  + G A  F+  NE  K     NL +  +  L  +   IP++L N
Sbjct:  1056 HRIGRTGRSNNIGYAYTFILPNEYTKAYDIYNLLKNNIYYLNKT-IDIPQDLEN 1108


>UNIPROTKB|Q8I416 [details] [associations]
            symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
            RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
            MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
            KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
            HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
        Length = 1490

 Score = 509 (184.2 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 132/414 (31%), Positives = 211/414 (50%)

Query:   115 DSLRKRL-EINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGK 173
             D  RK    I V+G   P P+  F  C L  K+LQ +E   +     +QMQ IP+ + G+
Sbjct:   702 DMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGR 761

Query:   174 SLLVSANTGSGKTASFLVPVISQCANIRLHHS--QNQKNPLAMVLTPTRELCIQVEEQAK 231
              ++  A TGSGKT S+L PVI       LH    +N   P++++LTPTREL IQV+ +AK
Sbjct:   762 DVIAIAETGSGKTLSYLFPVIRHV----LHQEPLRNNDGPISIILTPTRELSIQVKNEAK 817

Query:   232 LLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIE---LDDIRMF 288
             +  K +  +   V GG  +ARQ+  +++GVE++VGTPGR+ID+L   + +   L+ +   
Sbjct:   818 IYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFV 877

Query:   289 VLDEVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKP 347
             VLDE D +L  GF  Q+  I R      Q  M SAT    ++ M             G+ 
Sbjct:   878 VLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEK 937

Query:   348 NMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGM 407
                N  + Q    +E +KK  +L  +L     +    +++V  ++ ADLL   +      
Sbjct:   938 GKTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGL-VLIFVNKQIEADLLYLEL-YKYDY 995

Query:   408 KALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYV 467
               L +HG +   +R+  +  F   E  V++AT ++ RG+++  +  VI +  P+ I++Y+
Sbjct:   996 NLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCPDHIEDYI 1055

Query:   468 HQIGRASQMGDEGTAIVFV--NEENK-----NLFQELVDILKSSGAGIPRELIN 514
             H+IGR  +  + G A  F+  NE  K     NL +  +  L  +   IP++L N
Sbjct:  1056 HRIGRTGRSNNIGYAYTFILPNEYTKAYDIYNLLKNNIYYLNKT-IDIPQDLEN 1108


>UNIPROTKB|Q5ZM36 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
            RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
            SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
            InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
        Length = 412

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 107/386 (27%), Positives = 206/386 (53%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSG 172
             + D  +   E + + D  P    +F +  L + LL+ I A G++ P+ +Q +AI   + G
Sbjct:    21 EEDMTKVEFETSEEVDVTP----TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG 76

Query:   173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232
             + ++  + +G+GKTA+F + V+ QC +I++  +Q      A++L PTREL +Q+++    
Sbjct:    77 RDVIAQSQSGTGKTATFSISVL-QCLDIQVRETQ------ALILAPTRELAVQIQKGLLA 129

Query:   233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292
             LG  +  +    +GG  +   + ++  G  ++ GTPGR+ D++ +  +    I+M VLDE
Sbjct:   130 LGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDE 189

Query:   293 VDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN 351
              D ML +GF++Q+  ++R +    Q+++ SAT+  E+ +M              +  +  
Sbjct:   190 ADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTL 249

Query:   352 KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALS 411
             + +KQ  + VE  + K      L      T  AV++  ++   D L+  +         S
Sbjct:   250 EGIKQFFVAVEREEWKFDTLCDLYDTLTITQ-AVIFCNTKRKVDWLTEKMR-EANFTVSS 307

Query:   412 IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIG 471
             +HG+ P KER  IM+ F  G   V+++T +  RG+++  V  +I +D+PN+ + Y+H+IG
Sbjct:   308 MHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIG 367

Query:   472 RASQMGDEGTAIVFVNEENKNLFQEL 497
             R+ + G +G AI FV  ++  + +++
Sbjct:   368 RSGRYGRKGVAINFVKNDDIRILRDI 393


>UNIPROTKB|Q8JFP1 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
            EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
            ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
            Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
            KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
            ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
        Length = 407

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 116/364 (31%), Positives = 198/364 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    34 NFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQ 93

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   I L  +Q      A+VL PTREL  Q+++    LG  +       +GG  +  ++ 
Sbjct:    94 QL-EIDLKETQ------ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q +   ++VGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+ +IF+ +S 
Sbjct:   147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLST 206

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + +KQ  I VE  + K      
Sbjct:   207 NIQVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   267 LYETLTITQ-AVIFLNTRRKVDWLTEKMHARD-FTVSALHGDMDQKERDVIMREFRSGSS 324

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV EE+K +
Sbjct:   325 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRI 384

Query:   494 FQEL 497
              +++
Sbjct:   385 LRDI 388


>UNIPROTKB|Q2NL22 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
            GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
            GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
            GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
            IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
            ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
            Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
            InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
            Uniprot:Q2NL22
        Length = 411

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 107/386 (27%), Positives = 206/386 (53%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSG 172
             + D  +   E + + D  P    +F +  L + LL+ I A G++ P+ +Q +AI   + G
Sbjct:    20 EEDMTKVEFETSEEVDVTP----TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG 75

Query:   173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232
             + ++  + +G+GKTA+F + V+ QC +I++  +Q      A++L PTREL +Q+++    
Sbjct:    76 RDVIAQSQSGTGKTATFSISVL-QCLDIQVRETQ------ALILAPTRELAVQIQKGLLA 128

Query:   233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292
             LG  +  +    +GG  +   + ++  G  ++ GTPGR+ D++ +  +    I+M VLDE
Sbjct:   129 LGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDE 188

Query:   293 VDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN 351
              D ML +GF++Q+  ++R +    Q+++ SAT+  E+ +M              +  +  
Sbjct:   189 ADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTL 248

Query:   352 KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALS 411
             + +KQ  + VE  + K      L      T  AV++  ++   D L+  +         S
Sbjct:   249 EGIKQFFVAVEREEWKFDTLCDLYDTLTITQ-AVIFCNTKRKVDWLTEKMR-EANFTVSS 306

Query:   412 IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIG 471
             +HG+ P KER  IM+ F  G   V+++T +  RG+++  V  +I +D+PN+ + Y+H+IG
Sbjct:   307 MHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIG 366

Query:   472 RASQMGDEGTAIVFVNEENKNLFQEL 497
             R+ + G +G AI FV  ++  + +++
Sbjct:   367 RSGRYGRKGVAINFVKNDDIRILRDI 392


>UNIPROTKB|Q3SZ54 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
            IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
            ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
            Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
            InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
            NextBio:20866906 Uniprot:Q3SZ54
        Length = 406

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 120/376 (31%), Positives = 199/376 (52%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             SF   +LS+ LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   I L     Q    A+VL PTREL  Q+++    LG  +       +GG  +  +V 
Sbjct:    93 Q---IELDLKATQ----ALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 145

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
             ++Q +   +IVGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+  IF+ + S
Sbjct:   146 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 205

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + ++Q  I VE  + K      
Sbjct:   206 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 265

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   266 LYETLTITQ-AVIFINTRRKVDWLTEKMHARD-FTVSAMHGDMDQKERDVIMREFRSGSS 323

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI  V EE+K  
Sbjct:   324 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRT 383

Query:   494 FQELVDILKSSGAGIP 509
              +++     +S   +P
Sbjct:   384 LRDIETFYNTSIEEMP 399


>UNIPROTKB|E2RDZ4 [details] [associations]
            symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
            "negative regulation of translation" evidence=IEA] [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
            EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
            GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
        Length = 411

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 107/386 (27%), Positives = 206/386 (53%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSG 172
             + D  +   E + + D  P    +F +  L + LL+ I A G++ P+ +Q +AI   + G
Sbjct:    20 EEDMTKVEFETSEEVDVTP----TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG 75

Query:   173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232
             + ++  + +G+GKTA+F + V+ QC +I++  +Q      A++L PTREL +Q+++    
Sbjct:    76 RDVIAQSQSGTGKTATFSISVL-QCLDIQVRETQ------ALILAPTRELAVQIQKGLLA 128

Query:   233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292
             LG  +  +    +GG  +   + ++  G  ++ GTPGR+ D++ +  +    I+M VLDE
Sbjct:   129 LGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDE 188

Query:   293 VDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN 351
              D ML +GF++Q+  ++R +    Q+++ SAT+  E+ +M              +  +  
Sbjct:   189 ADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTL 248

Query:   352 KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALS 411
             + +KQ  + VE  + K      L      T  AV++  ++   D L+  +         S
Sbjct:   249 EGIKQFFVAVEREEWKFDTLCDLYDTLTITQ-AVIFCNTKRKVDWLTEKMR-EANFTVSS 306

Query:   412 IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIG 471
             +HG+ P KER  IM+ F  G   V+++T +  RG+++  V  +I +D+PN+ + Y+H+IG
Sbjct:   307 MHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIG 366

Query:   472 RASQMGDEGTAIVFVNEENKNLFQEL 497
             R+ + G +G AI FV  ++  + +++
Sbjct:   367 RSGRYGRKGVAINFVKNDDIRILRDI 392


>UNIPROTKB|F1P895 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
            EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
            Uniprot:F1P895
        Length = 406

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 120/376 (31%), Positives = 199/376 (52%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             SF   +LS+ LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   I L     Q    A+VL PTREL  Q+++    LG  +       +GG  +  +V 
Sbjct:    93 Q---IELDLKATQ----ALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 145

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
             ++Q +   +IVGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+  IF+ + S
Sbjct:   146 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 205

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + ++Q  I VE  + K      
Sbjct:   206 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 265

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   266 LYETLTITQ-AVIFINTRRKVDWLTEKMHARD-FTVSAMHGDMDQKERDVIMREFRSGSS 323

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI  V EE+K  
Sbjct:   324 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRT 383

Query:   494 FQELVDILKSSGAGIP 509
              +++     +S   +P
Sbjct:   384 LRDIETFYNTSIEEMP 399


>UNIPROTKB|J9NY67 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
            ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
            GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
        Length = 406

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 120/376 (31%), Positives = 199/376 (52%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             SF   +LS+ LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   I L     Q    A+VL PTREL  Q+++    LG  +       +GG  +  +V 
Sbjct:    93 Q---IELDLKATQ----ALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 145

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
             ++Q +   +IVGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+  IF+ + S
Sbjct:   146 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 205

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + ++Q  I VE  + K      
Sbjct:   206 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 265

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   266 LYETLTITQ-AVIFINTRRKVDWLTEKMHARD-FTVSAMHGDMDQKERDVIMREFRSGSS 323

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI  V EE+K  
Sbjct:   324 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRT 383

Query:   494 FQELVDILKSSGAGIP 509
              +++     +S   +P
Sbjct:   384 LRDIETFYNTSIEEMP 399


>UNIPROTKB|P38919 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048026 "positive
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
            of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
            evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IDA] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
            "cytokine-mediated signaling pathway" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
            GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
            GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
            GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
            PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
            PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
            OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
            EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
            EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
            UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
            SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
            STRING:P38919 PhosphoSite:P38919 DMDM:20532400
            REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
            PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
            KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
            HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
            InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
            EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
            CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
            Uniprot:P38919
        Length = 411

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 107/386 (27%), Positives = 206/386 (53%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSG 172
             + D  +   E + + D  P    +F +  L + LL+ I A G++ P+ +Q +AI   + G
Sbjct:    20 EEDMTKVEFETSEEVDVTP----TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG 75

Query:   173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232
             + ++  + +G+GKTA+F + V+ QC +I++  +Q      A++L PTREL +Q+++    
Sbjct:    76 RDVIAQSQSGTGKTATFSISVL-QCLDIQVRETQ------ALILAPTRELAVQIQKGLLA 128

Query:   233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292
             LG  +  +    +GG  +   + ++  G  ++ GTPGR+ D++ +  +    I+M VLDE
Sbjct:   129 LGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDE 188

Query:   293 VDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN 351
              D ML +GF++Q+  ++R +    Q+++ SAT+  E+ +M              +  +  
Sbjct:   189 ADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTL 248

Query:   352 KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALS 411
             + +KQ  + VE  + K      L      T  AV++  ++   D L+  +         S
Sbjct:   249 EGIKQFFVAVEREEWKFDTLCDLYDTLTITQ-AVIFCNTKRKVDWLTEKMR-EANFTVSS 306

Query:   412 IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIG 471
             +HG+ P KER  IM+ F  G   V+++T +  RG+++  V  +I +D+PN+ + Y+H+IG
Sbjct:   307 MHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIG 366

Query:   472 RASQMGDEGTAIVFVNEENKNLFQEL 497
             R+ + G +G AI FV  ++  + +++
Sbjct:   367 RSGRYGRKGVAINFVKNDDIRILRDI 392


>UNIPROTKB|P60842 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
            evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
            [GO:0008135 "translation factor activity, nucleic acid binding"
            evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
            process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
            Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
            Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
            Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
            GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
            GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
            EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
            EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
            RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
            PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
            ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
            MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
            PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
            Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
            GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
            neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
            EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
            ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
            Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
            Uniprot:P60842
        Length = 406

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 120/376 (31%), Positives = 199/376 (52%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             SF   +LS+ LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   I L     Q    A+VL PTREL  Q+++    LG  +       +GG  +  +V 
Sbjct:    93 Q---IELDLKATQ----ALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 145

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
             ++Q +   +IVGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+  IF+ + S
Sbjct:   146 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 205

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + ++Q  I VE  + K      
Sbjct:   206 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 265

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   266 LYETLTITQ-AVIFINTRRKVDWLTEKMHARD-FTVSAMHGDMDQKERDVIMREFRSGSS 323

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI  V EE+K  
Sbjct:   324 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRT 383

Query:   494 FQELVDILKSSGAGIP 509
              +++     +S   +P
Sbjct:   384 LRDIETFYNTSIEEMP 399


>UNIPROTKB|A6M928 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
            UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
            Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
            Uniprot:A6M928
        Length = 406

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 120/376 (31%), Positives = 199/376 (52%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             SF   +LS+ LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   I L     Q    A+VL PTREL  Q+++    LG  +       +GG  +  +V 
Sbjct:    93 Q---IELDLKATQ----ALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 145

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
             ++Q +   +IVGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+  IF+ + S
Sbjct:   146 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 205

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + ++Q  I VE  + K      
Sbjct:   206 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 265

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   266 LYETLTITQ-AVIFINTRRKVDWLTEKMHARD-FTVSAMHGDMDQKERDVIMREFRSGSS 323

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI  V EE+K  
Sbjct:   324 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRT 383

Query:   494 FQELVDILKSSGAGIP 509
              +++     +S   +P
Sbjct:   384 LRDIETFYNTSIEEMP 399


>UNIPROTKB|A6M931 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
            "regulation of translation" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
            UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
            GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
        Length = 411

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 107/386 (27%), Positives = 206/386 (53%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSG 172
             + D  +   E + + D  P    +F +  L + LL+ I A G++ P+ +Q +AI   + G
Sbjct:    20 EEDMTKVEFETSEEVDVTP----TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG 75

Query:   173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232
             + ++  + +G+GKTA+F + V+ QC +I++  +Q      A++L PTREL +Q+++    
Sbjct:    76 RDVIAQSQSGTGKTATFSISVL-QCLDIQVRETQ------ALILAPTRELAVQIQKGLLA 128

Query:   233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292
             LG  +  +    +GG  +   + ++  G  ++ GTPGR+ D++ +  +    I+M VLDE
Sbjct:   129 LGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDE 188

Query:   293 VDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN 351
              D ML +GF++Q+  ++R +    Q+++ SAT+  E+ +M              +  +  
Sbjct:   189 ADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTL 248

Query:   352 KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALS 411
             + +KQ  + VE  + K      L      T  AV++  ++   D L+  +         S
Sbjct:   249 EGIKQFFVAVEREEWKFDTLCDLYDTLTITQ-AVIFCNTKRKVDWLTEKMR-EANFTVSS 306

Query:   412 IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIG 471
             +HG+ P KER  IM+ F  G   V+++T +  RG+++  V  +I +D+PN+ + Y+H+IG
Sbjct:   307 MHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIG 366

Query:   472 RASQMGDEGTAIVFVNEENKNLFQEL 497
             R+ + G +G AI FV  ++  + +++
Sbjct:   367 RSGRYGRKGVAINFVKNDDIRILRDI 392


>UNIPROTKB|A0R8U6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
            "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
            ProteinModelPortal:A0R8U6 STRING:A0R8U6
            EnsemblBacteria:EBBACT00000069056 GeneID:4546566
            GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
        Length = 528

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 117/356 (32%), Positives = 192/356 (53%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F    LS  LLQ++E+ G++  TP+Q + IP AL GK ++  A TG+GKTA+F +P++ 
Sbjct:     3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             +   +  H    Q     +V+ PTREL IQV E+   +GK    +   + GG  + RQ+ 
Sbjct:    63 K---VDTHKESVQ----GIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-SL 314
              +++   +IVGTPGR++D + +  + L ++   VLDE D ML  GF + +  I   +   
Sbjct:   116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPET 175

Query:   315 PQILMYSATISQEVEKMXXXXXXX--XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
              Q L++SAT+   + ++                +  MPN  ++Q  + V+  KK    FD
Sbjct:   176 HQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN--IQQFYLEVQEKKK----FD 229

Query:   373 ILMSKQHFTPP--AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
             +L        P  A+V+  ++   D LS A+++  G  A  IHG+    +R  ++R F  
Sbjct:   230 VLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR-GYAAEGIHGDLTQAKRMSVLRKFKE 288

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV 486
             G + V+VAT +  RG+++ GV  V  FD+P   + YVH+IGR  + G +G A++FV
Sbjct:   289 GSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFV 344


>UNIPROTKB|Q63GX5 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
            "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
            ProteinModelPortal:Q63GX5 STRING:Q63GX5
            EnsemblBacteria:EBBACT00000041470 GeneID:3022962
            GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
            BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
        Length = 528

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 117/356 (32%), Positives = 192/356 (53%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F    LS  LLQ++E+ G++  TP+Q + IP AL GK ++  A TG+GKTA+F +P++ 
Sbjct:     3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             +   +  H    Q     +V+ PTREL IQV E+   +GK    +   + GG  + RQ+ 
Sbjct:    63 K---VDTHKESVQ----GIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-SL 314
              +++   +IVGTPGR++D + +  + L ++   VLDE D ML  GF + +  I   +   
Sbjct:   116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPET 175

Query:   315 PQILMYSATISQEVEKMXXXXXXX--XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
              Q L++SAT+   + ++                +  MPN  ++Q  + V+  KK    FD
Sbjct:   176 HQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN--IQQFYLEVQEKKK----FD 229

Query:   373 ILMSKQHFTPP--AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
             +L        P  A+V+  ++   D LS A+++  G  A  IHG+    +R  ++R F  
Sbjct:   230 VLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR-GYAAEGIHGDLTQAKRMSVLRKFKE 288

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV 486
             G + V+VAT +  RG+++ GV  V  FD+P   + YVH+IGR  + G +G A++FV
Sbjct:   289 GSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFV 344


>UNIPROTKB|Q6HPE6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:281309 "Bacillus thuringiensis serovar konkukian str.
            97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
            "ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
            ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
            GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
            PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
        Length = 528

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 117/356 (32%), Positives = 192/356 (53%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F    LS  LLQ++E+ G++  TP+Q + IP AL GK ++  A TG+GKTA+F +P++ 
Sbjct:     3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             +   +  H    Q     +V+ PTREL IQV E+   +GK    +   + GG  + RQ+ 
Sbjct:    63 K---VDTHKESVQ----GIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-SL 314
              +++   +IVGTPGR++D + +  + L ++   VLDE D ML  GF + +  I   +   
Sbjct:   116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPET 175

Query:   315 PQILMYSATISQEVEKMXXXXXXX--XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
              Q L++SAT+   + ++                +  MPN  ++Q  + V+  KK    FD
Sbjct:   176 HQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN--IQQFYLEVQEKKK----FD 229

Query:   373 ILMSKQHFTPP--AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
             +L        P  A+V+  ++   D LS A+++  G  A  IHG+    +R  ++R F  
Sbjct:   230 VLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR-GYAAEGIHGDLTQAKRMSVLRKFKE 288

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV 486
             G + V+VAT +  RG+++ GV  V  FD+P   + YVH+IGR  + G +G A++FV
Sbjct:   289 GSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFV 344


>UNIPROTKB|Q73EU1 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
            RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
            DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
            GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
            Uniprot:Q73EU1
        Length = 525

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 117/356 (32%), Positives = 192/356 (53%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F    LS  LLQ++E+ G++  TP+Q + IP AL GK ++  A TG+GKTA+F +P++ 
Sbjct:     3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             +   +  H    Q     +V+ PTREL IQV E+   +GK    +   + GG  + RQ+ 
Sbjct:    63 K---VDTHKESVQ----GIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-SL 314
              +++   +IVGTPGR++D + +  + L ++   VLDE D ML  GF + +  I   +   
Sbjct:   116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPET 175

Query:   315 PQILMYSATISQEVEKMXXXXXXX--XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
              Q L++SAT+   + ++                +  MPN  ++Q  + V+  KK    FD
Sbjct:   176 HQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN--IQQFYLEVQEKKK----FD 229

Query:   373 ILMSKQHFTPP--AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
             +L        P  A+V+  ++   D LS A+++  G  A  IHG+    +R  ++R F  
Sbjct:   230 VLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR-GYAAEGIHGDLTQAKRMSVLRKFKE 288

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV 486
             G + V+VAT +  RG+++ GV  V  FD+P   + YVH+IGR  + G +G A++FV
Sbjct:   289 GSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFV 344


>UNIPROTKB|Q81IT9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
            STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
            GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
            PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
        Length = 533

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 117/356 (32%), Positives = 192/356 (53%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F    LS  LLQ++E+ G++  TP+Q + IP AL GK ++  A TG+GKTA+F +P++ 
Sbjct:     3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             +   +  H    Q     +V+ PTREL IQV E+   +GK    +   + GG  + RQ+ 
Sbjct:    63 K---VDTHKESVQ----GIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-SL 314
              +++   +IVGTPGR++D + +  + L ++   VLDE D ML  GF + +  I   +   
Sbjct:   116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPET 175

Query:   315 PQILMYSATISQEVEKMXXXXXXX--XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
              Q L++SAT+   + ++                +  MPN  ++Q  + V+  KK    FD
Sbjct:   176 HQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN--IQQFYLEVQEKKK----FD 229

Query:   373 ILMSKQHFTPP--AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
             +L        P  A+V+  ++   D LS A+++  G  A  IHG+    +R  ++R F  
Sbjct:   230 VLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR-GYAAEGIHGDLTQAKRMSVLRKFKE 288

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV 486
             G + V+VAT +  RG+++ GV  V  FD+P   + YVH+IGR  + G +G A++FV
Sbjct:   289 GSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFV 344


>UNIPROTKB|Q81VG0 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 117/356 (32%), Positives = 192/356 (53%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F    LS  LLQ++E+ G++  TP+Q + IP AL GK ++  A TG+GKTA+F +P++ 
Sbjct:     3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             +   +  H    Q     +V+ PTREL IQV E+   +GK    +   + GG  + RQ+ 
Sbjct:    63 K---VDTHKESVQ----GIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-SL 314
              +++   +IVGTPGR++D + +  + L ++   VLDE D ML  GF + +  I   +   
Sbjct:   116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPET 175

Query:   315 PQILMYSATISQEVEKMXXXXXXX--XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
              Q L++SAT+   + ++                +  MPN  ++Q  + V+  KK    FD
Sbjct:   176 HQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN--IQQFYLEVQEKKK----FD 229

Query:   373 ILMSKQHFTPP--AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
             +L        P  A+V+  ++   D LS A+++  G  A  IHG+    +R  ++R F  
Sbjct:   230 VLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR-GYAAEGIHGDLTQAKRMSVLRKFKE 288

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV 486
             G + V+VAT +  RG+++ GV  V  FD+P   + YVH+IGR  + G +G A++FV
Sbjct:   289 GSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFV 344


>TIGR_CMR|BA_0247 [details] [associations]
            symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
            GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 117/356 (32%), Positives = 192/356 (53%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F    LS  LLQ++E+ G++  TP+Q + IP AL GK ++  A TG+GKTA+F +P++ 
Sbjct:     3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             +   +  H    Q     +V+ PTREL IQV E+   +GK    +   + GG  + RQ+ 
Sbjct:    63 K---VDTHKESVQ----GIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-SL 314
              +++   +IVGTPGR++D + +  + L ++   VLDE D ML  GF + +  I   +   
Sbjct:   116 ALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPET 175

Query:   315 PQILMYSATISQEVEKMXXXXXXX--XXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFD 372
              Q L++SAT+   + ++                +  MPN  ++Q  + V+  KK    FD
Sbjct:   176 HQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN--IQQFYLEVQEKKK----FD 229

Query:   373 ILMSKQHFTPP--AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430
             +L        P  A+V+  ++   D LS A+++  G  A  IHG+    +R  ++R F  
Sbjct:   230 VLTRLLDIQSPELAIVFGRTKRRVDELSEALNLR-GYAAEGIHGDLTQAKRMSVLRKFKE 288

Query:   431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV 486
             G + V+VAT +  RG+++ GV  V  FD+P   + YVH+IGR  + G +G A++FV
Sbjct:   289 GSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFV 344


>MGI|MGI:95303 [details] [associations]
            symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
            EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
            EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
            PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
            UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
            MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
            REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
            Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
            InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
            Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
        Length = 406

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 120/376 (31%), Positives = 199/376 (52%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             SF   +LS+ LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   I L     Q    A+VL PTREL  Q+++    LG  +       +GG  +  +V 
Sbjct:    93 Q---IELDLKATQ----ALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 145

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
             ++Q +   +IVGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+  IF+ + S
Sbjct:   146 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 205

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + ++Q  I VE  + K      
Sbjct:   206 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 265

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   266 LYETLTITQ-AVIFINTRRKVDWLTEKMHARD-FTVSAMHGDMDQKERDVIMREFRSGSS 323

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI  V EE+K  
Sbjct:   324 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRT 383

Query:   494 FQELVDILKSSGAGIP 509
              +++     +S   +P
Sbjct:   384 LRDIETFYNTSIEEMP 399


>RGD|1591139 [details] [associations]
            symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
            isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
            IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
            ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
            KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
        Length = 411

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 107/386 (27%), Positives = 206/386 (53%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSG 172
             + D  +   E + + D  P    +F +  L + LL+ I A G++ P+ +Q +AI   + G
Sbjct:    20 EEDMTKVEFETSEEVDVTP----TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG 75

Query:   173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232
             + ++  + +G+GKTA+F + V+ QC +I++  +Q      A++L PTREL +Q+++    
Sbjct:    76 RDVIAQSQSGTGKTATFSISVL-QCLDIQVRETQ------ALILAPTRELAVQIQKGLLA 128

Query:   233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292
             LG  +  +    +GG  +   + ++  G  ++ GTPGR+ D++ +  +    I+M VLDE
Sbjct:   129 LGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDE 188

Query:   293 VDCMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPN 351
              D ML +GF++Q+  ++R +    Q+++ SAT+  E+ +M              +  +  
Sbjct:   189 ADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTL 248

Query:   352 KAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALS 411
             + +KQ  + VE  + K      L      T  AV++  ++   D L+  +         S
Sbjct:   249 EGIKQFFVAVEREEWKFDTLCDLYDTLTITQ-AVIFCNTKRKVDWLTEKMR-EANFTVSS 306

Query:   412 IHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIG 471
             +HG+ P KER  IM+ F  G   V+++T +  RG+++  V  +I +D+PN+ + Y+H+IG
Sbjct:   307 MHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIG 366

Query:   472 RASQMGDEGTAIVFVNEENKNLFQEL 497
             R+ + G +G AI FV  ++  + +++
Sbjct:   367 RSGRYGRKGVAINFVKNDDIRILRDI 392


>UNIPROTKB|Q6P3V8 [details] [associations]
            symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
            norvegicus" [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
            GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
            UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
            Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
            InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
            Uniprot:Q6P3V8
        Length = 406

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 120/376 (31%), Positives = 199/376 (52%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             SF   +LS+ LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   I L     Q    A+VL PTREL  Q+++    LG  +       +GG  +  +V 
Sbjct:    93 Q---IELDLKATQ----ALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQ 145

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
             ++Q +   +IVGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+  IF+ + S
Sbjct:   146 KLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNS 205

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + ++Q  I VE  + K      
Sbjct:   206 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 265

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   266 LYETLTITQ-AVIFINTRRKVDWLTEKMHARD-FTVSAMHGDMDQKERDVIMREFRSGSS 323

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI  V EE+K  
Sbjct:   324 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRT 383

Query:   494 FQELVDILKSSGAGIP 509
              +++     +S   +P
Sbjct:   384 LRDIETFYNTSIEEMP 399


>WB|WBGene00002083 [details] [associations]
            symbol:inf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
            GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
            EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
            UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
            DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
            PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
            EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
            UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
            InParanoid:P27639 NextBio:890522 Uniprot:P27639
        Length = 402

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 115/366 (31%), Positives = 200/366 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             SF    L ++LL+ I   G++ P+ +Q +AI    +GK ++  A +G+GKTA+F V ++ 
Sbjct:    30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
                  R+ H        A+V+ PTREL  Q+++    LG+ L       +GG ++     
Sbjct:    90 -----RIDHEDPHVQ--ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142

Query:   256 RIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315
             +++ G+ ++VGTPGR+ D++ ++ ++   I+MFVLDE D ML RGF+DQ+ ++FR++   
Sbjct:   143 KLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQD 202

Query:   316 -QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDIL 374
              Q+++ SAT+  EV  +              K  +  + ++Q  I V+ ++ K   FD L
Sbjct:   203 VQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWK---FDCL 259

Query:   375 MSKQHFT--PPAVVYVGSRLGADLLSNAISVTTGMKALS-IHGEKPMKERREIMRSFLVG 431
                 +      AV++  +R   D L+    +T     +S +HG+    ER  IMR F  G
Sbjct:   260 CDLYNVVNVTQAVIFCNTRRKVDTLTE--KMTENQFTVSCLHGDMDQAERDTIMREFRSG 317

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
                V++ T IL RG+++  V  VI +D+P++ + Y+H+IGR+ + G +G AI FV E + 
Sbjct:   318 SSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDA 377

Query:   492 NLFQEL 497
                +E+
Sbjct:   378 RQLKEI 383


>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
            symbol:eif4a2 "eukaryotic translation initiation
            factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
            EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
            ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
            ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
        Length = 411

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 114/364 (31%), Positives = 198/364 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    38 NFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQ 97

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   + +   + Q    A+VL PTREL  Q+++    LG  +       +GG  +  ++ 
Sbjct:    98 Q---LEIEQKETQ----ALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRNEMQ 150

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q +   ++VGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+ +IF+ +S 
Sbjct:   151 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLST 210

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + +KQ  I VE  + K      
Sbjct:   211 NIQVVLLSATMPADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 270

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   271 LYETLTITQ-AVIFLNTRRKVDWLTEKMHARD-FTVSALHGDMDQKERDIIMREFRSGSS 328

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV EE+K +
Sbjct:   329 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRI 388

Query:   494 FQEL 497
              +++
Sbjct:   389 LRDI 392


>FB|FBgn0036754 [details] [associations]
            symbol:CG5589 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00550000074863 KO:K14779 OMA:NVMKQSG
            RefSeq:NP_649009.1 ProteinModelPortal:Q9VVK8 SMR:Q9VVK8
            STRING:Q9VVK8 PRIDE:Q9VVK8 EnsemblMetazoa:FBtr0075170 GeneID:39979
            KEGG:dme:Dmel_CG5589 UCSC:CG5589-RA FlyBase:FBgn0036754
            InParanoid:Q9VVK8 OrthoDB:EOG4QBZMN PhylomeDB:Q9VVK8
            GenomeRNAi:39979 NextBio:816380 Bgee:Q9VVK8 Uniprot:Q9VVK8
        Length = 594

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 126/416 (30%), Positives = 214/416 (51%)

Query:   113 QTDSLRKRLEINVKGDAVPAPILSFSSCSLSQKLL----QNIEAAGYDMPTPVQMQAIPS 168
             + +  RK+  I V G  VP P+ SF + +   K+L    QN+ +  +D PTP+QMQA+P 
Sbjct:    93 EANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPV 152

Query:   169 ALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEE 228
              L  ++L+  A TGSGKT +FL P+I+    +R H +   +   A+VL PTREL  Q+  
Sbjct:   153 LLQRRALMACAPTGSGKTLAFLTPIIN---GLRAHKTTGLR---ALVLAPTRELAQQIYR 206

Query:   229 QAKLLGKGLPFKTALVVG-GDAMARQVYRIQQGVELIVGTPGRLIDLLMKHD--IELDDI 285
             +   L +    +T  +    +A  +     +Q  +++V TP R+  LL +    ++L  +
Sbjct:   207 ECAELTRETGLRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHV 266

Query:   286 RMFVLDEVDCMLQRG---FRDQVMQIFRAISLPQ--ILMYSATISQEVEKMXXXXXXXXX 340
               FVLDE D +++ G   F++Q+  I+ A S P   +  +SAT +  V K          
Sbjct:   267 EWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWALRHLKNLV 326

Query:   341 XXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNA 400
                 G  N   + V+Q  ++V S   K      L+ +Q   PP +V+V S+  A  L   
Sbjct:   327 RITIGVQNSATETVQQELLFVGSEGGKLVAIRDLV-RQGLQPPVLVFVQSKERAKQLFEE 385

Query:   401 ISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMP 460
             + +  G+    IH E+   +R   +++F  G + V++ T ++GRG++  GV  VI +D P
Sbjct:   386 L-LYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLVINYDFP 444

Query:   461 NSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPRELINSR 516
              +   Y+H+IGR  + G  G AI F  +E+ +  + +  I+K+SG  +P  ++  +
Sbjct:   445 PTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALIIKNSGGTVPEYMLQMK 500


>SGD|S000003046 [details] [associations]
            symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
            family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
            subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
            "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
            EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
            ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
            MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
            EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
            KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
            KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
            GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
        Length = 523

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 130/429 (30%), Positives = 214/429 (49%)

Query:    95 FYVRESDENSGFQSLTIGQTDSLRKRLEINVKG--DAVPAPILSFSSCSLSQKLLQNIEA 152
             FYV    ++    SL     D   K  EI V+   D    P+LSF   SL   +    E 
Sbjct:    76 FYV----QSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSI--QAEI 129

Query:   153 AGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPL 212
             + +  PTP+Q  A P  LSGK ++  A TGSGKT +F VP IS   N      Q ++   
Sbjct:   130 SKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMN-----DQKKRGIQ 184

Query:   213 AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLI 272
              +V++PTREL  Q+ +   +L   +  +   V GG     Q  ++++  +++V TPGRL+
Sbjct:   185 VLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLL 243

Query:   273 DLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI--SLPQILMYSATISQEVEK 330
             DLL +  ++L  +   VLDE D ML++GF + +  I R    S  Q LM++AT  +EV +
Sbjct:   244 DLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRE 303

Query:   331 MXXXXXXXXXXXXXGKPNM--PNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPP----A 384
             +             G  +    NK + Q+   V+   K++KL ++L  K H  P      
Sbjct:   304 LASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELL-KKYHSGPKKNEKV 362

Query:   385 VVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGR 444
             +++   +  A  +   +    G    +IHG+   ++R + +  F  G+  +++AT +  R
Sbjct:   363 LIFALYKKEAARVERNLKYN-GYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAAR 421

Query:   445 GVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSS 504
             G+++  V+ VI    P ++++YVH+IGR  + G  GTA     E+ K+L   LV++L  +
Sbjct:   422 GLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGA 481

Query:   505 GAGIPRELI 513
                +P +LI
Sbjct:   482 NQPVPEDLI 490


>ZFIN|ZDB-GENE-031030-2 [details] [associations]
            symbol:eif4a1a "eukaryotic translation initiation
            factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
            "helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
            IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
            STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
            KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
            Uniprot:Q802C9
        Length = 406

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 115/365 (31%), Positives = 200/365 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             SF   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    33 SFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q  ++ L  +Q      AMVL PTREL  Q+++    LG  +       +GG  +   V 
Sbjct:    93 QI-DVELKATQ------AMVLAPTRELAQQIQKVVLALGDYMGATCHACIGGTNVRNDVQ 145

Query:   256 RIQQGV-ELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q  V  ++VGTPGR+ D+L +  +    I+MF LDE D ML RGF+DQ+ +IF+ ++ 
Sbjct:   146 KLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLAT 205

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+ QEV ++              K  +  + ++Q  I VE  K++ KL  +
Sbjct:   206 DTQVILLSATMPQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVE--KEEWKLDTL 263

Query:   374 LMSKQHFT-PPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432
                 +  T   AV+++ +R   D L+  +         ++HG+   KER  IM+ F  G 
Sbjct:   264 CDLYETLTITQAVIFINTRRKVDWLTEKMHARD-FTVSALHGDMEQKERDVIMKEFRSGS 322

Query:   433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492
               V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI  + E++K 
Sbjct:   323 SRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMITEDDKR 382

Query:   493 LFQEL 497
               +++
Sbjct:   383 TLRDI 387


>DICTYBASE|DDB_G0287361 [details] [associations]
            symbol:ddx41 "DEAD box protein abstrakt"
            species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
            GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
            EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
            IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
            KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
        Length = 671

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 121/408 (29%), Positives = 211/408 (51%)

Query:   117 LRKRLEINVKGDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLL 176
             +R +L I   G+ +P PI +F    + + ++  +   G   P+P+Q+Q +P  LSG+ ++
Sbjct:   204 VRDQLNIITDGEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMI 263

Query:   177 VSANTGSGKTASFLVPVISQCAN--IRLHHSQNQKNPLAMVLTPTRELCIQ----VEEQA 230
               A TGSGKT  F +P++        +L   Q +  P  ++L P+REL  Q    V    
Sbjct:   264 GIAYTGSGKTLVFTLPMVLFALEEECKLPIIQGE-GPFGLILCPSRELARQTYDLVNSFT 322

Query:   231 KLLGK--GLP-FKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRM 287
               L K  G P  +T L +GG  +  Q +  ++GV +I+ TPGRL+DLL K  I     + 
Sbjct:   323 NALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKY 382

Query:   288 FVLDEVDCMLQRGFRDQVMQIF-RAISLPQILMYSATISQEVEKMXXXXXXXXXXXXXGK 346
               LDE D ++  GF D +  +     +  Q L++SAT+ +++++              G+
Sbjct:   383 LGLDEADRLIDLGFEDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVEVNVGR 442

Query:   347 PNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTG 406
                 N  V Q    VE  K + K+  +L   Q   PP +++  ++   D +   + +   
Sbjct:   443 AGAANLNVTQE---VEFVKPEAKIVYLLECLQKTPPPVLIFCENKKDVDDIYEYLLLKQ- 498

Query:   407 MKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEY 466
             ++A+SIHG+K   ER   +++F  G+  V+VAT +  +G++   ++ VI FDMP  I+ Y
Sbjct:   499 VEAVSIHGDKSQDERESAIKAFREGKKDVLVATDVASKGLDFPEIQHVINFDMPREIENY 558

Query:   467 VHQIGRASQMGDEGTAIVFVNEEN-KNLFQELVDILKSSGAGIPRELI 513
             +H+IGR  + G++G A  F+N+ N ++L  +L  +L  +   +P  L+
Sbjct:   559 IHRIGRTGRRGNKGVATTFINKNNTESLLLDLKYLLIEAKQKVPPALL 606


>UNIPROTKB|Q3SZ65 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
            OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
            RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
            SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
            GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
            OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
        Length = 407

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 113/364 (31%), Positives = 198/364 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    34 NFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQ 93

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   + +   + Q    A+VL PTREL  Q+++    LG  +       +GG  +  ++ 
Sbjct:    94 Q---LEIEFKETQ----ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q +   ++VGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+ +IF+ ++ 
Sbjct:   147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + +KQ  I VE  + K      
Sbjct:   207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   267 LYETLTITQ-AVIFLNTRRKVDWLTEKMHARD-FTVSALHGDMDQKERDVIMREFRSGSS 324

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV EE+K +
Sbjct:   325 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRI 384

Query:   494 FQEL 497
              +++
Sbjct:   385 LRDI 388


>UNIPROTKB|E2R3J1 [details] [associations]
            symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
            SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
            KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
        Length = 407

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 113/364 (31%), Positives = 198/364 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    34 NFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQ 93

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   + +   + Q    A+VL PTREL  Q+++    LG  +       +GG  +  ++ 
Sbjct:    94 Q---LEIEFKETQ----ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q +   ++VGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+ +IF+ ++ 
Sbjct:   147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + +KQ  I VE  + K      
Sbjct:   207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   267 LYETLTITQ-AVIFLNTRRKVDWLTEKMHARD-FTVSALHGDMDQKERDVIMREFRSGSS 324

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV EE+K +
Sbjct:   325 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRI 384

Query:   494 FQEL 497
              +++
Sbjct:   385 LRDI 388


>UNIPROTKB|Q14240 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
            "helicase activity" evidence=TAS] [GO:0006446 "regulation of
            translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
            translation initiation factor 4F complex" evidence=TAS] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
            GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
            GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
            CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
            EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
            IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
            UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
            ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
            STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
            PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
            Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
            UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
            HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
            PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
            EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
            PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
            Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
        Length = 407

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 113/364 (31%), Positives = 198/364 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    34 NFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQ 93

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   + +   + Q    A+VL PTREL  Q+++    LG  +       +GG  +  ++ 
Sbjct:    94 Q---LEIEFKETQ----ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q +   ++VGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+ +IF+ ++ 
Sbjct:   147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + +KQ  I VE  + K      
Sbjct:   207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   267 LYETLTITQ-AVIFLNTRRKVDWLTEKMHARD-FTVSALHGDMDQKERDVIMREFRSGSS 324

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV EE+K +
Sbjct:   325 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRI 384

Query:   494 FQEL 497
              +++
Sbjct:   385 LRDI 388


>UNIPROTKB|A6M930 [details] [associations]
            symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
            isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
            ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
            Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
            Uniprot:A6M930
        Length = 407

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 113/364 (31%), Positives = 198/364 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    34 NFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQ 93

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   + +   + Q    A+VL PTREL  Q+++    LG  +       +GG  +  ++ 
Sbjct:    94 Q---LEIEFKETQ----ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q +   ++VGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+ +IF+ ++ 
Sbjct:   147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + +KQ  I VE  + K      
Sbjct:   207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   267 LYETLTITQ-AVIFLNTRRKVDWLTEKMHARD-FTVSALHGDMDQKERDVIMREFRSGSS 324

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV EE+K +
Sbjct:   325 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRI 384

Query:   494 FQEL 497
              +++
Sbjct:   385 LRDI 388


>MGI|MGI:106906 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
            OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
            EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
            RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
            SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
            PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
            Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
            NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
            GermOnline:ENSMUSG00000022884 Uniprot:P10630
        Length = 407

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 113/364 (31%), Positives = 198/364 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    34 NFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQ 93

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   + +   + Q    A+VL PTREL  Q+++    LG  +       +GG  +  ++ 
Sbjct:    94 Q---LEIEFKETQ----ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q +   ++VGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+ +IF+ ++ 
Sbjct:   147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + +KQ  I VE  + K      
Sbjct:   207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   267 LYETLTITQ-AVIFLNTRRKVDWLTEKMHARD-FTVSALHGDMDQKERDVIMREFRSGSS 324

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV EE+K +
Sbjct:   325 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRI 384

Query:   494 FQEL 497
              +++
Sbjct:   385 LRDI 388


>RGD|1309225 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10116 "Rattus norvegicus" [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
            RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
            SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
            World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
            UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
            ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
            GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
        Length = 407

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 113/364 (31%), Positives = 198/364 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    34 NFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQ 93

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   + +   + Q    A+VL PTREL  Q+++    LG  +       +GG  +  ++ 
Sbjct:    94 Q---LEIEFKETQ----ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 146

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q +   ++VGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+ +IF+ ++ 
Sbjct:   147 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 206

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + +KQ  I VE  + K      
Sbjct:   207 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 266

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   267 LYETLTITQ-AVIFLNTRRKVDWLTEKMHARD-FTVSALHGDMDQKERDVIMREFRSGSS 324

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV EE+K +
Sbjct:   325 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRI 384

Query:   494 FQEL 497
              +++
Sbjct:   385 LRDI 388


>UNIPROTKB|F8WFX2 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
            OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
            Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
        Length = 408

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 113/364 (31%), Positives = 198/364 (54%)

Query:   136 SFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVIS 195
             +F   +L + LL+ I A G++ P+ +Q +AI   + G  ++  A +G+GKTA+F + ++ 
Sbjct:    35 NFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQ 94

Query:   196 QCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY 255
             Q   + +   + Q    A+VL PTREL  Q+++    LG  +       +GG  +  ++ 
Sbjct:    95 Q---LEIEFKETQ----ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQ 147

Query:   256 RIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL 314
             ++Q +   ++VGTPGR+ D+L +  +    I+MFVLDE D ML RGF+DQ+ +IF+ ++ 
Sbjct:   148 KLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNT 207

Query:   315 P-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q+++ SAT+  +V ++              K  +  + +KQ  I VE  + K      
Sbjct:   208 SIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCD 267

Query:   374 LMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433
             L      T  AV+++ +R   D L+  +         ++HG+   KER  IMR F  G  
Sbjct:   268 LYETLTITQ-AVIFLNTRRKVDWLTEKMHARD-FTVSALHGDMDQKERDVIMREFRSGSS 325

Query:   434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNL 493
              V++ T +L RG+++  V  VI +D+P + + Y+H+IGR  + G +G AI FV EE+K +
Sbjct:   326 RVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRI 385

Query:   494 FQEL 497
              +++
Sbjct:   386 LRDI 389


>DICTYBASE|DDB_G0281711 [details] [associations]
            symbol:ddx27 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
            GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
            EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
            STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
            KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
        Length = 783

 Score = 496 (179.7 bits), Expect = 6.7e-47, P = 6.7e-47
 Identities = 120/394 (30%), Positives = 217/394 (55%)

Query:   114 TDSLRKRLEINVK-GDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSG 172
             TD + K L+ N K    V   + +F    LS+ LL+ ++  G+  PTP+Q +AIP AL+G
Sbjct:   169 TDKI-KVLQSNRKLKKIVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNG 227

Query:   173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232
             K +L SA+TGSGKTA+FL+PV+ +     L      +    ++L PTREL +Q +   + 
Sbjct:   228 KDILASASTGSGKTAAFLLPVLERL----LFRDSEYRAIRVLILLPTRELALQCQSVMEN 283

Query:   233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLID-LLMKHDIELDDIRMFVLD 291
             L +     + L+VGG +   Q   +++  ++++ TPGRLID LL  H I LDD+ + +LD
Sbjct:   284 LAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILD 343

Query:   292 EVDCMLQRGFRDQVMQIFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMP 350
             E D +L  GF+D++ +I  +     Q +++SAT++ EV+ +                   
Sbjct:   344 EADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQV 403

Query:   351 NKAVKQLAIWVESNKKKQKLFD---ILMS--KQHFTPPA-VVYVGSRLGADLLSNAISVT 404
                ++Q  + +    K Q L D   IL+S   + F     +++  S+     L   I   
Sbjct:   404 TSTLEQEFVKI----KPQHLSDRPAILLSLCTRVFNQGGTIIFCRSKKEVHRL-RIIFGL 458

Query:   405 TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIK 464
             + +KA  +HG    ++R + ++ F  G+V  ++A+ +  RG++++GV+ VI ++MPN++ 
Sbjct:   459 SDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMA 518

Query:   465 EYVHQIGRASQMGDEGTAIVFVNEENKNLFQELV 498
              Y+H++GR ++ G +G +  F+ + ++ L +++V
Sbjct:   519 NYIHRVGRTARAGMDGKSCSFITDNDRKLLKDIV 552


>UNIPROTKB|F1NQ09 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
            IPI:IPI00819782 ProteinModelPortal:F1NQ09
            Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
        Length = 451

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 125/394 (31%), Positives = 202/394 (51%)

Query:   130 VPAPILSFSSC-SLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTAS 188
             +P P+  F         ++ NI   G+  PTP+Q QA P  L G  L+  A TG+GKT +
Sbjct:    47 IPNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLA 106

Query:   189 FLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQA-KLLGKGLPFKTALVVGG 247
             +L+P     A+  +   + +  P  +VL PTREL +QVE +  K   KG  FK+  + GG
Sbjct:   107 YLMPGFIHLASQPIPKDK-RGGPGMLVLAPTRELALQVEAECLKYTYKG--FKSICIYGG 163

Query:   248 DAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQ 307
                  Q+  + +GV++++ TPGRL DL M + I L  I   VLDE D ML  GF  Q+M+
Sbjct:   164 GDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMK 223

Query:   308 IFRAISLP-QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKK 366
             I   +    Q +M SAT    V ++             G  ++    V    +  + +  
Sbjct:   224 ILIDVRPDRQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAVSGVVLKYLQFDKDIF 283

Query:   367 KQKLFDILMSKQHF-TPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIM 425
               K   +  + Q F T   VV+V   + AD +++ + V  G+   S+HG++   +R + +
Sbjct:   284 TWKYMQV--NAQSFCTDVVVVFVQLHVVADDIASDLGVQ-GVPVQSLHGDREQCDREQAL 340

Query:   426 RSFLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVF 485
               F  G+V ++VAT +  RG+++  +  V  FD P +I+EYVH++GR  + G  G A+  
Sbjct:   341 DDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTL 400

Query:   486 VNEENKNLFQELVDILKSSGAGIPRELIN--SRY 517
             + +++     EL+DIL+ +   +P ELI+   RY
Sbjct:   401 ITKKDWKAASELIDILQRAKQVVPDELISMAERY 434


>TIGR_CMR|GSU_0522 [details] [associations]
            symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
            "RNA catabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
            RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
            KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
            BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
        Length = 443

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 112/371 (30%), Positives = 201/371 (54%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + F+  +L ++++Q +  AG+   TP+Q + +P +L GK +   A TG+GKTA+FL+ + 
Sbjct:     1 MKFADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLF 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
             ++   +R      +++P A++L PTREL +Q+E+ A++LG    F    + GG    +Q 
Sbjct:    61 TKL--LRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQK 118

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-- 312
               +++G +++VGTPGRLID L +    L +I M V+DE D M   GF   +  I R +  
Sbjct:   119 NALKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPP 178

Query:   313 -SLPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLF 371
                 Q LM+SAT++Q V ++                 M  + V+Q+   V   K+K  L 
Sbjct:   179 YDKRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHV-GRKEKFPLL 237

Query:   372 DILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG 431
               L+ K+      +++V ++  A+ L   ++         I G+   ++R +I+  F  G
Sbjct:   238 LGLLRKEGMER-TMIFVNTKREAEFLDERLNAND-FPCRVISGDVEQRKRLKILEDFKSG 295

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
             ++P+++AT +  RG+ + GV  VI +D+P   ++YVH+IGR ++ G EG AI   +E+  
Sbjct:   296 KLPIMIATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMADEDGA 355

Query:   492 NLFQELVDILK 502
                + + + +K
Sbjct:   356 FHLEAIHEYIK 366


>UNIPROTKB|P96614 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:224308 "Bacillus subtilis subsp. subtilis str. 168"
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
            "response to cold" evidence=IGI] [GO:0010501 "RNA secondary
            structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
            evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
            GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
            EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
            ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
            EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
            PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
            GO:GO:0010501 Uniprot:P96614
        Length = 494

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 116/371 (31%), Positives = 192/371 (51%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             ++F   +LS  L++ I   G++  TP+Q Q IP  LS K ++  A TG+GKTA+F +P++
Sbjct:     3 ITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLV 62

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              +        +    N  A+V+ PTREL IQV E+   +G+    K   + GG  + RQ+
Sbjct:    63 EKI-------NPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQI 115

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI-S 313
               +++   +IVGTPGRL+D + +  I L+++   V+DE D ML  GF D +  I   + S
Sbjct:   116 RALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPS 175

Query:   314 LPQILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDI 373
               Q L++SAT+   ++++                 M    ++Q  + V+  KK    FD 
Sbjct:   176 EHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKK----FDT 231

Query:   374 LMSKQHFTPP--AVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG 431
             L        P  A+V+  ++   D L+ A+++  G  A  IHG+    +R   +R F  G
Sbjct:   232 LTRLLDIQSPELAIVFGRTKRRVDELAEALNLR-GYAAEGIHGDLTQAKRMVALRKFKEG 290

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491
              + V+VAT +  RG+++ GV  V  FD+P   + YVH+IGR  + G  G A+ F+    K
Sbjct:   291 AIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREK 350

Query:   492 NLFQELVDILK 502
             ++ + +    K
Sbjct:   351 SMLRAIEQTTK 361


>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
            symbol:PF08_0096 "RNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
            HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
            ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
            EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
            EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
            ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
        Length = 941

 Score = 299 (110.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
 Identities = 62/199 (31%), Positives = 111/199 (55%)

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q +M+SAT  +E++ +             GK    N+ +KQ  ++VE   K   L ++L 
Sbjct:   582 QTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLLA 641

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
                +     +++V ++  AD++   +S    + A+ IHG+K   ER   ++ F  G   +
Sbjct:   642 ENNNGL--TILFVETKRKADIIERFLS-NQKLNAVCIHGDKSQDERERALKLFKRGIKNI 698

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT +  RG+++  ++ VI FD+P++I +Y+H+IGR  + G+ G A  FVNE+NKN+F+
Sbjct:   699 LVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNEDNKNIFK 758

Query:   496 ELVDILKSSGAGIPRELIN 514
             +L+  L+     IPR  +N
Sbjct:   759 DLLATLEECNQQIPRWFLN 777

 Score = 267 (99.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
 Identities = 67/191 (35%), Positives = 100/191 (52%)

Query:   139 SCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCA 198
             S +L++ LL NI+   YD  TP+Q  ++   ++   L+  A TGSGKTA +L+P+I+   
Sbjct:   366 SLNLNELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHML 425

Query:   199 -NIRLHHS---QNQKN----------PLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALV 244
              N    H+   QN K           P+ ++L PTREL +Q+   AK        K  ++
Sbjct:   426 INDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVL 485

Query:   245 VGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQ 304
              GG+ +  Q+  + +G ++IV TPGRL D+L K  I+L      VLDE D ML  GF  Q
Sbjct:   486 YGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQ 545

Query:   305 VMQIFRAISLP 315
             +  I     +P
Sbjct:   546 IRSIVNDYDMP 556


>UNIPROTKB|Q8IAU1 [details] [associations]
            symbol:PF08_0096 "RNA helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
            HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
            ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
            EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
            EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
            ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
        Length = 941

 Score = 299 (110.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
 Identities = 62/199 (31%), Positives = 111/199 (55%)

Query:   316 QILMYSATISQEVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLFDILM 375
             Q +M+SAT  +E++ +             GK    N+ +KQ  ++VE   K   L ++L 
Sbjct:   582 QTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLLA 641

Query:   376 SKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPV 435
                +     +++V ++  AD++   +S    + A+ IHG+K   ER   ++ F  G   +
Sbjct:   642 ENNNGL--TILFVETKRKADIIERFLS-NQKLNAVCIHGDKSQDERERALKLFKRGIKNI 698

Query:   436 IVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495
             +VAT +  RG+++  ++ VI FD+P++I +Y+H+IGR  + G+ G A  FVNE+NKN+F+
Sbjct:   699 LVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNEDNKNIFK 758

Query:   496 ELVDILKSSGAGIPRELIN 514
             +L+  L+     IPR  +N
Sbjct:   759 DLLATLEECNQQIPRWFLN 777

 Score = 267 (99.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
 Identities = 67/191 (35%), Positives = 100/191 (52%)

Query:   139 SCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCA 198
             S +L++ LL NI+   YD  TP+Q  ++   ++   L+  A TGSGKTA +L+P+I+   
Sbjct:   366 SLNLNELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHML 425

Query:   199 -NIRLHHS---QNQKN----------PLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALV 244
              N    H+   QN K           P+ ++L PTREL +Q+   AK        K  ++
Sbjct:   426 INDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVL 485

Query:   245 VGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQ 304
              GG+ +  Q+  + +G ++IV TPGRL D+L K  I+L      VLDE D ML  GF  Q
Sbjct:   486 YGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQ 545

Query:   305 VMQIFRAISLP 315
             +  I     +P
Sbjct:   546 IRSIVNDYDMP 556


>UNIPROTKB|Q47Z59 [details] [associations]
            symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
            "ribosome biogenesis" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
            STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
            OMA:PKFIVAT ProtClustDB:CLSK869483
            BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
        Length = 448

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 111/355 (31%), Positives = 190/355 (53%)

Query:   135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVI 194
             + FS   L   L+  IE  G++ PT +Q QAIP+A++G  L+ S+ TGSGKT +F++P +
Sbjct:     1 MQFSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPAL 60

Query:   195 SQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254
              + +  R   + ++++P  ++LTPTREL  QV  Q +L      +K  L++GG+    QV
Sbjct:    61 QRLSKNR---ALSKRDPRVVILTPTRELAKQVFSQLRLFTANTQYKAVLILGGENFNDQV 117

Query:   255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS- 313
               +Q+  E IV TPGRL D L +    L+ + + +LDE D ML  GF  ++ QI +A   
Sbjct:   118 KVLQKEPEFIVATPGRLADHLTQGHFHLNGLELLILDEADRMLDLGFSKELTQINKAADH 177

Query:   314 -LPQILMYSATISQ-EVEKMXXXXXXXXXXXXXGKPNMPNKAVKQLAIWVESNKKKQKLF 371
                Q L++SAT+   +V +                 +  +  + +     ++  +K+ L 
Sbjct:   178 RKRQTLLFSATLDHAQVNEFATELLTKPKRIAINAGHSEHVDIAKRFYLADNLTQKEALL 237

Query:   372 DILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG 431
                +  +  +   +++  +R   D L+  ++    + A+++ GE    +R +IM SF  G
Sbjct:   238 QHFLVTEK-SQQIIIFTATRSDTDRLAKLLT-EQNLNAVALSGELNQGQRNQIMESFSKG 295

Query:   432 EVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFV 486
             +  ++V T +  RG++L+ V  VI FDMP   +E+VH+IGR  + G +G AI  V
Sbjct:   296 QHKILVTTDLASRGLDLINVSHVINFDMPKHTEEFVHRIGRTGRAGTKGDAISLV 350

WARNING:  HSPs involving 719 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      533       499   0.00084  119 3  11 22  0.39    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  969
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  272 KB (2144 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  42.48u 0.14s 42.62t   Elapsed:  00:00:02
  Total cpu time:  42.55u 0.14s 42.69t   Elapsed:  00:00:02
  Start:  Fri May 10 04:21:23 2013   End:  Fri May 10 04:21:25 2013
WARNINGS ISSUED:  2

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