Query 009500
Match_columns 533
No_of_seqs 379 out of 2989
Neff 9.2
Searched_HMMs 13730
Date Mon Mar 25 06:35:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009500.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009500hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j0sa1 c.37.1.19 (A:22-243) P 100.0 1.7E-41 1.2E-45 316.1 23.3 207 132-345 14-221 (222)
2 d1veca_ c.37.1.19 (A:) DEAD bo 100.0 9.2E-40 6.7E-44 302.0 24.7 202 135-343 3-206 (206)
3 d1wrba1 c.37.1.19 (A:164-401) 100.0 5.5E-40 4E-44 310.1 21.9 224 122-345 6-238 (238)
4 d2g9na1 c.37.1.19 (A:21-238) I 100.0 1E-39 7.6E-44 303.8 21.5 210 129-345 6-217 (218)
5 d1qdea_ c.37.1.19 (A:) Initiat 100.0 2.6E-39 1.9E-43 300.0 23.6 209 127-343 2-211 (212)
6 d1t6na_ c.37.1.19 (A:) Spliceo 100.0 9.2E-39 6.7E-43 295.5 24.7 202 135-343 1-206 (207)
7 d1hv8a1 c.37.1.19 (A:3-210) Pu 100.0 8.6E-38 6.3E-42 289.5 25.2 202 134-344 3-206 (208)
8 d1s2ma1 c.37.1.19 (A:46-251) P 100.0 3.8E-37 2.7E-41 285.0 23.3 204 135-345 1-205 (206)
9 d1q0ua_ c.37.1.19 (A:) Probabl 100.0 7.1E-35 5.2E-39 270.7 19.2 203 135-344 1-208 (209)
10 d2bmfa2 c.37.1.14 (A:178-482) 100.0 1.7E-34 1.2E-38 284.2 18.4 272 169-488 6-299 (305)
11 d1fuka_ c.37.1.19 (A:) Initiat 100.0 1.9E-30 1.4E-34 229.1 15.8 159 354-515 1-160 (162)
12 d1s2ma2 c.37.1.19 (A:252-422) 100.0 7E-30 5.1E-34 228.1 17.8 166 349-517 2-167 (171)
13 d2j0sa2 c.37.1.19 (A:244-411) 100.0 3.8E-30 2.8E-34 228.4 15.3 163 349-514 3-166 (168)
14 d1hv8a2 c.37.1.19 (A:211-365) 100.0 1.9E-28 1.4E-32 215.2 19.1 149 351-503 1-149 (155)
15 d2rb4a1 c.37.1.19 (A:307-474) 100.0 4.2E-28 3.1E-32 215.3 16.9 157 350-509 2-165 (168)
16 d1t5ia_ c.37.1.19 (A:) Spliceo 100.0 3E-28 2.2E-32 216.4 15.6 159 354-515 2-161 (168)
17 d1oywa3 c.37.1.19 (A:207-406) 99.9 6.7E-27 4.9E-31 212.9 17.7 136 360-498 11-146 (200)
18 d2p6ra3 c.37.1.19 (A:1-202) He 99.9 2.3E-27 1.7E-31 218.3 12.4 182 142-338 10-195 (202)
19 d1oywa2 c.37.1.19 (A:1-206) Re 99.9 2.5E-27 1.8E-31 218.8 10.3 188 136-340 3-202 (206)
20 d1c4oa2 c.37.1.19 (A:410-583) 99.9 5.1E-25 3.7E-29 193.1 17.5 128 366-495 16-148 (174)
21 d1gkub1 c.37.1.16 (B:1-250) He 99.9 2.7E-25 1.9E-29 209.6 15.8 165 148-328 34-218 (237)
22 d1t5la2 c.37.1.19 (A:415-595) 99.9 1.6E-24 1.2E-28 193.2 17.4 127 364-492 14-145 (181)
23 d1wp9a1 c.37.1.19 (A:1-200) pu 99.9 3.8E-23 2.8E-27 189.5 23.3 164 155-329 7-171 (200)
24 d1jr6a_ c.37.1.14 (A:) HCV hel 99.8 5.2E-22 3.8E-26 168.6 8.3 99 381-490 35-137 (138)
25 d2p6ra4 c.37.1.19 (A:203-403) 99.8 1.5E-20 1.1E-24 171.0 11.4 114 380-493 39-190 (201)
26 d1wp9a2 c.37.1.19 (A:201-486) 99.8 2.8E-20 2E-24 179.9 12.4 125 365-491 143-277 (286)
27 d2eyqa3 c.37.1.19 (A:546-778) 99.8 9E-18 6.5E-22 154.2 23.2 175 141-334 39-223 (233)
28 d1gm5a4 c.37.1.19 (A:550-755) 99.8 3.9E-20 2.9E-24 167.1 5.8 155 364-519 12-177 (206)
29 d1gm5a3 c.37.1.19 (A:286-549) 99.8 4.2E-18 3.1E-22 159.5 16.8 177 145-341 71-258 (264)
30 d1rifa_ c.37.1.23 (A:) DNA hel 99.8 9.3E-19 6.8E-23 167.8 11.8 152 156-326 112-264 (282)
31 d2fz4a1 c.37.1.19 (A:24-229) D 99.8 1E-18 7.3E-23 160.1 10.4 136 157-324 70-205 (206)
32 d1gkub2 c.37.1.16 (B:251-498) 99.7 4E-20 2.9E-24 174.8 -2.9 119 363-495 10-133 (248)
33 d1a1va2 c.37.1.14 (A:326-624) 99.7 1E-18 7.4E-23 163.0 5.6 105 381-487 36-153 (299)
34 d2eyqa5 c.37.1.19 (A:779-989) 99.7 7.2E-17 5.3E-21 143.9 17.3 137 369-505 19-159 (211)
35 d2fwra1 c.37.1.19 (A:257-456) 99.7 2E-18 1.4E-22 157.5 5.5 117 364-488 78-197 (200)
36 d1yksa1 c.37.1.14 (A:185-324) 99.7 1.2E-17 8.8E-22 142.7 8.8 135 170-325 5-140 (140)
37 d1a1va1 c.37.1.14 (A:190-325) 99.6 3.4E-16 2.5E-20 133.1 11.3 126 172-324 8-136 (136)
38 d1z5za1 c.37.1.19 (A:663-906) 99.5 3E-14 2.2E-18 133.5 11.6 137 363-499 67-209 (244)
39 d1z3ix1 c.37.1.19 (X:390-735) 99.5 1.9E-13 1.4E-17 133.8 15.7 141 363-504 99-247 (346)
40 d1z3ix2 c.37.1.19 (X:92-389) R 99.4 4.9E-12 3.6E-16 121.8 17.9 160 157-325 55-231 (298)
41 d1yksa2 c.37.1.14 (A:325-623) 99.3 1.4E-12 1E-16 123.8 10.3 101 381-487 36-155 (299)
42 d1tf5a4 c.37.1.19 (A:396-570) 99.3 5.7E-12 4.2E-16 108.2 13.0 128 359-490 12-148 (175)
43 d1z63a1 c.37.1.19 (A:432-661) 99.3 4.5E-12 3.3E-16 117.3 11.5 147 157-324 12-162 (230)
44 d1tf5a3 c.37.1.19 (A:1-226,A:3 98.9 3.3E-08 2.4E-12 89.9 17.7 172 154-342 78-270 (273)
45 d1nkta3 c.37.1.19 (A:-15-225,A 98.8 3.7E-08 2.7E-12 90.0 16.3 170 157-342 97-285 (288)
46 d1nkta4 c.37.1.19 (A:397-615) 98.8 2E-08 1.5E-12 87.3 12.5 130 358-491 11-193 (219)
47 d1w36d1 c.37.1.19 (D:2-360) Ex 98.0 7.7E-06 5.6E-10 79.2 10.5 141 156-320 147-294 (359)
48 d1uaaa1 c.37.1.19 (A:2-307) DE 97.6 6.5E-05 4.8E-09 70.7 8.4 71 157-235 1-71 (306)
49 d1pjra1 c.37.1.19 (A:1-318) DE 97.2 0.00045 3.3E-08 65.2 9.1 70 157-234 11-80 (318)
50 d1a5ta2 c.37.1.20 (A:1-207) de 96.9 0.0027 1.9E-07 55.8 11.2 34 158-191 3-43 (207)
51 d2qy9a2 c.37.1.10 (A:285-495) 96.7 0.026 1.9E-06 49.0 15.5 66 175-252 12-78 (211)
52 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 96.4 0.004 2.9E-07 64.1 9.5 71 156-234 10-80 (623)
53 d1gm5a3 c.37.1.19 (A:286-549) 96.3 0.0065 4.7E-07 55.1 9.2 91 379-471 130-224 (264)
54 d1vmaa2 c.37.1.10 (A:82-294) G 96.3 0.098 7.1E-06 45.3 16.5 83 175-269 14-103 (213)
55 d1okkd2 c.37.1.10 (D:97-303) G 96.1 0.027 2E-06 48.8 11.8 20 172-191 6-25 (207)
56 d2gnoa2 c.37.1.20 (A:11-208) g 96.0 0.021 1.5E-06 49.3 10.5 111 162-323 2-117 (198)
57 d1ls1a2 c.37.1.10 (A:89-295) G 95.9 0.0074 5.4E-07 52.6 7.0 129 175-335 13-145 (207)
58 d1l8qa2 c.37.1.20 (A:77-289) C 95.8 0.037 2.7E-06 48.3 11.8 43 284-326 97-142 (213)
59 d2eyqa3 c.37.1.19 (A:546-778) 95.8 0.032 2.3E-06 49.3 11.3 94 365-458 88-185 (233)
60 d1t5la1 c.37.1.19 (A:2-414) Nu 95.7 0.0088 6.4E-07 57.9 7.7 67 157-236 11-82 (413)
61 d1sxje2 c.37.1.20 (E:4-255) Re 95.4 0.01 7.5E-07 53.2 6.3 40 283-323 130-169 (252)
62 d1j8yf2 c.37.1.10 (F:87-297) G 95.2 0.013 9.4E-07 51.1 6.1 17 175-191 15-31 (211)
63 d1sxjb2 c.37.1.20 (B:7-230) Re 95.1 0.012 8.7E-07 51.9 5.7 42 282-324 99-141 (224)
64 d1njfa_ c.37.1.20 (A:) delta p 95.1 0.28 2E-05 43.1 15.2 40 283-323 114-153 (239)
65 d1iqpa2 c.37.1.20 (A:2-232) Re 94.7 0.092 6.7E-06 46.0 10.8 18 173-190 46-63 (231)
66 d1sxjd2 c.37.1.20 (D:26-262) R 94.7 0.015 1.1E-06 51.5 5.5 16 174-189 35-50 (237)
67 d1ixza_ c.37.1.20 (A:) AAA dom 94.7 0.07 5.1E-06 47.6 10.0 54 133-189 4-59 (247)
68 d1c4oa2 c.37.1.19 (A:410-583) 94.7 0.28 2E-05 40.8 13.0 111 209-329 30-147 (174)
69 d1d2na_ c.37.1.20 (A:) Hexamer 94.4 0.12 8.7E-06 46.0 10.8 17 173-189 41-57 (246)
70 d1g6oa_ c.37.1.11 (A:) Hexamer 94.1 0.017 1.3E-06 54.0 4.5 52 160-222 153-205 (323)
71 d1sxjc2 c.37.1.20 (C:12-238) R 94.0 0.061 4.4E-06 47.1 7.7 46 278-324 93-138 (227)
72 d1p9ra_ c.37.1.11 (A:) Extrace 93.9 0.041 3E-06 53.1 6.9 48 133-197 133-182 (401)
73 d1jbka_ c.37.1.20 (A:) ClpB, A 92.8 0.35 2.5E-05 41.0 10.2 120 172-294 43-186 (195)
74 d2b8ta1 c.37.1.24 (A:11-149) T 92.2 0.18 1.3E-05 40.4 7.3 88 175-297 5-92 (139)
75 d2eyqa5 c.37.1.19 (A:779-989) 91.7 0.18 1.3E-05 43.3 7.0 93 208-312 29-125 (211)
76 d1nc8a_ g.40.1.1 (A:) HIV nucl 91.5 0.013 9.3E-07 31.9 -0.4 12 36-47 6-17 (29)
77 d2i3ba1 c.37.1.11 (A:1-189) Ca 91.2 0.12 8.5E-06 43.0 5.4 25 173-198 2-26 (189)
78 d1c4oa1 c.37.1.19 (A:2-409) Nu 91.0 0.31 2.3E-05 46.6 8.8 67 157-236 8-79 (408)
79 d1t5la2 c.37.1.19 (A:415-595) 91.0 1.6 0.00011 36.3 12.4 77 210-296 31-111 (181)
80 d1um8a_ c.37.1.20 (A:) ClpX {H 90.7 0.1 7.5E-06 49.3 4.9 18 172-189 68-85 (364)
81 d1tf7a2 c.37.1.11 (A:256-497) 90.0 0.25 1.8E-05 43.3 6.7 38 171-218 25-62 (242)
82 d1dsqa_ g.40.1.1 (A:) Nucleic 89.8 0.05 3.6E-06 28.1 0.9 13 36-48 2-14 (26)
83 d1w5sa2 c.37.1.20 (A:7-293) CD 89.0 0.1 7.6E-06 46.8 3.3 15 175-189 49-63 (287)
84 d1g41a_ c.37.1.20 (A:) HslU {H 88.9 0.081 5.9E-06 51.5 2.6 19 171-189 48-66 (443)
85 d1kaga_ c.37.1.2 (A:) Shikimat 88.8 0.12 9E-06 41.9 3.4 20 172-191 2-21 (169)
86 d1hv8a2 c.37.1.19 (A:211-365) 88.6 0.94 6.8E-05 36.5 8.9 73 210-292 28-104 (155)
87 d1ofha_ c.37.1.20 (A:) HslU {H 88.1 0.13 9.5E-06 47.4 3.4 19 171-189 48-66 (309)
88 d1e9ra_ c.37.1.11 (A:) Bacteri 87.8 0.25 1.8E-05 47.6 5.4 43 171-223 49-91 (433)
89 d1r6bx2 c.37.1.20 (X:169-436) 87.7 0.87 6.4E-05 40.5 8.6 121 172-295 39-183 (268)
90 d1in4a2 c.37.1.20 (A:17-254) H 87.6 0.49 3.6E-05 41.2 6.9 17 173-189 36-52 (238)
91 d1fuka_ c.37.1.19 (A:) Initiat 87.5 1.7 0.00013 35.2 9.9 75 209-293 26-104 (162)
92 d1g5ta_ c.37.1.11 (A:) ATP:cor 87.0 0.86 6.2E-05 36.9 7.4 51 282-332 92-145 (157)
93 d1s2ma2 c.37.1.19 (A:252-422) 86.7 2.5 0.00018 34.4 10.7 76 209-294 31-110 (171)
94 d1oywa3 c.37.1.19 (A:207-406) 86.5 1.7 0.00012 36.7 9.6 74 209-292 29-106 (200)
95 d1zp6a1 c.37.1.25 (A:6-181) Hy 86.2 0.15 1.1E-05 42.0 2.4 20 170-189 2-21 (176)
96 d1qvra2 c.37.1.20 (A:149-535) 85.2 5 0.00036 37.4 13.1 127 165-295 34-186 (387)
97 d1y63a_ c.37.1.1 (A:) Probable 85.2 0.24 1.8E-05 40.6 3.2 18 172-189 5-22 (174)
98 d1fnna2 c.37.1.20 (A:1-276) CD 84.9 0.61 4.4E-05 41.1 6.1 17 173-189 44-60 (276)
99 d1ly1a_ c.37.1.1 (A:) Polynucl 84.3 0.2 1.5E-05 40.2 2.2 16 174-189 4-19 (152)
100 d1rkba_ c.37.1.1 (A:) Adenylat 84.2 0.26 1.9E-05 40.3 2.9 18 173-190 5-22 (173)
101 d1w36b1 c.37.1.19 (B:1-485) Ex 83.8 0.94 6.9E-05 43.6 7.5 61 172-232 16-78 (485)
102 d2bdta1 c.37.1.25 (A:1-176) Hy 83.4 0.29 2.1E-05 39.9 2.9 16 174-189 4-19 (176)
103 d1qhxa_ c.37.1.3 (A:) Chloramp 83.3 0.31 2.3E-05 39.9 3.1 19 171-189 2-20 (178)
104 d1ixsb2 c.37.1.20 (B:4-242) Ho 83.1 0.31 2.2E-05 42.6 3.1 17 173-189 36-52 (239)
105 d1cr2a_ c.37.1.11 (A:) Gene 4 82.3 0.62 4.5E-05 41.6 5.0 40 170-218 33-72 (277)
106 d1t5ia_ c.37.1.19 (A:) Spliceo 82.2 3 0.00022 33.9 9.0 75 210-294 27-105 (168)
107 d1hv8a1 c.37.1.19 (A:3-210) Pu 82.2 2.5 0.00018 35.7 8.8 75 379-458 70-153 (208)
108 d1lw7a2 c.37.1.1 (A:220-411) T 82.2 0.25 1.8E-05 40.8 2.1 17 173-189 8-24 (192)
109 d1lv7a_ c.37.1.20 (A:) AAA dom 81.8 0.29 2.1E-05 43.6 2.3 52 135-189 9-62 (256)
110 d2j0sa2 c.37.1.19 (A:244-411) 81.7 3.1 0.00022 33.8 8.9 74 210-293 34-111 (168)
111 d1nlfa_ c.37.1.11 (A:) Hexamer 81.5 0.76 5.5E-05 40.8 5.3 66 168-235 25-91 (274)
112 d1viaa_ c.37.1.2 (A:) Shikimat 81.0 0.44 3.2E-05 38.8 3.1 17 173-189 1-17 (161)
113 d1jr6a_ c.37.1.14 (A:) HCV hel 80.8 0.53 3.9E-05 37.4 3.4 67 209-289 34-100 (138)
114 d2rb4a1 c.37.1.19 (A:307-474) 80.6 4.5 0.00033 32.7 9.5 75 209-293 31-109 (168)
115 d1m8pa3 c.37.1.15 (A:391-573) 80.5 0.29 2.1E-05 40.2 1.8 21 170-190 4-24 (183)
116 d1ak2a1 c.37.1.1 (A:14-146,A:1 80.1 0.5 3.6E-05 39.5 3.2 20 172-191 3-22 (190)
117 d1ye8a1 c.37.1.11 (A:1-178) Hy 79.1 0.63 4.6E-05 38.1 3.6 14 174-187 2-15 (178)
118 d1zina1 c.37.1.1 (A:1-125,A:16 79.0 0.49 3.6E-05 39.1 2.8 17 174-190 2-18 (182)
119 d2j0sa1 c.37.1.19 (A:22-243) P 78.8 4.7 0.00034 34.4 9.4 72 381-456 85-165 (222)
120 d1gvnb_ c.37.1.21 (B:) Plasmid 78.5 0.5 3.7E-05 41.8 2.9 16 174-189 34-49 (273)
121 d1e6ca_ c.37.1.2 (A:) Shikimat 78.1 0.61 4.5E-05 38.2 3.1 19 173-191 3-21 (170)
122 d1sxja2 c.37.1.20 (A:295-547) 78.0 0.54 3.9E-05 41.2 2.9 41 283-324 122-164 (253)
123 d1zaka1 c.37.1.1 (A:3-127,A:15 77.9 0.56 4.1E-05 39.2 2.9 18 174-191 5-22 (189)
124 d1khta_ c.37.1.1 (A:) Adenylat 77.8 0.99 7.2E-05 36.9 4.5 17 173-189 2-18 (190)
125 d1n0wa_ c.37.1.11 (A:) DNA rep 77.7 0.96 7E-05 38.1 4.5 20 171-190 22-41 (242)
126 d1knqa_ c.37.1.17 (A:) Glucona 77.5 0.47 3.5E-05 38.6 2.2 16 175-190 9-24 (171)
127 d1tf7a1 c.37.1.11 (A:14-255) C 77.5 0.99 7.2E-05 38.7 4.6 24 171-194 25-48 (242)
128 d1xbta1 c.37.1.24 (A:18-150) T 77.3 1.3 9.2E-05 34.8 4.7 37 175-221 5-41 (133)
129 d1s3ga1 c.37.1.1 (A:1-125,A:16 77.1 0.62 4.5E-05 38.6 2.9 18 174-191 2-19 (182)
130 d1np6a_ c.37.1.10 (A:) Molybdo 77.1 0.97 7.1E-05 36.4 4.1 14 175-188 5-18 (170)
131 d2cdna1 c.37.1.1 (A:1-181) Ade 77.0 0.61 4.4E-05 38.6 2.8 18 174-191 2-19 (181)
132 d1e4va1 c.37.1.1 (A:1-121,A:15 76.4 0.62 4.5E-05 38.5 2.7 17 174-190 2-18 (179)
133 d1yksa2 c.37.1.14 (A:325-623) 76.1 1.7 0.00013 39.1 5.9 69 210-289 36-104 (299)
134 d1qf9a_ c.37.1.1 (A:) UMP/CMP 75.6 0.69 5E-05 38.7 2.8 17 174-190 8-24 (194)
135 d1ukza_ c.37.1.1 (A:) Uridylat 75.4 0.73 5.3E-05 38.7 2.9 17 175-191 11-27 (196)
136 d1yj5a2 c.37.1.1 (A:351-522) 5 74.7 0.63 4.6E-05 38.4 2.2 15 174-188 16-30 (172)
137 d2ak3a1 c.37.1.1 (A:0-124,A:16 74.6 0.77 5.6E-05 38.5 2.8 19 173-191 7-25 (189)
138 d1bg2a_ c.37.1.9 (A:) Kinesin 74.6 1 7.4E-05 41.3 3.9 25 165-189 67-93 (323)
139 d1byia_ c.37.1.10 (A:) Dethiob 74.0 1.3 9.5E-05 37.4 4.3 34 173-216 2-36 (224)
140 d1xx6a1 c.37.1.24 (A:2-142) Th 73.4 1.8 0.00013 34.2 4.7 37 175-221 10-46 (141)
141 d1teva_ c.37.1.1 (A:) UMP/CMP 73.4 0.88 6.4E-05 38.0 2.9 16 175-190 4-19 (194)
142 d1szpa2 c.37.1.11 (A:145-395) 73.1 1.1 7.9E-05 38.7 3.6 20 171-190 33-52 (251)
143 d1akya1 c.37.1.1 (A:3-130,A:16 73.0 0.92 6.7E-05 37.5 2.9 18 174-191 4-21 (180)
144 d3adka_ c.37.1.1 (A:) Adenylat 72.6 1.1 7.8E-05 37.5 3.3 21 170-190 6-26 (194)
145 d1x6va3 c.37.1.4 (A:34-228) Ad 72.2 0.5 3.7E-05 39.4 1.0 19 172-190 19-37 (195)
146 d1gkya_ c.37.1.1 (A:) Guanylat 71.7 1.1 8.1E-05 37.2 3.1 16 173-188 2-17 (186)
147 d2iyva1 c.37.1.2 (A:2-166) Shi 71.4 1.1 8.1E-05 36.3 3.0 18 174-191 3-20 (165)
148 d2i1qa2 c.37.1.11 (A:65-322) D 71.4 1.4 0.00011 37.8 4.0 26 171-196 33-58 (258)
149 d1nksa_ c.37.1.1 (A:) Adenylat 71.3 1.8 0.00013 35.4 4.5 15 175-189 4-18 (194)
150 d1v8ka_ c.37.1.9 (A:) Kinesin 70.5 1.4 0.0001 41.1 3.8 24 166-189 106-131 (362)
151 d1g8pa_ c.37.1.20 (A:) ATPase 70.4 0.75 5.4E-05 42.4 1.8 18 171-188 27-44 (333)
152 d1pzna2 c.37.1.11 (A:96-349) D 70.0 1.1 8.1E-05 38.9 2.9 20 171-190 35-54 (254)
153 d2pmka1 c.37.1.12 (A:467-707) 69.6 0.95 6.9E-05 39.6 2.2 17 171-187 28-44 (241)
154 d1lvga_ c.37.1.1 (A:) Guanylat 69.3 1.3 9.8E-05 36.9 3.1 16 173-188 1-16 (190)
155 d1znwa1 c.37.1.1 (A:20-201) Gu 69.0 1.4 0.0001 36.4 3.1 17 172-188 2-18 (182)
156 d1e32a2 c.37.1.20 (A:201-458) 68.9 0.99 7.2E-05 39.9 2.3 17 172-188 38-54 (258)
157 d1goja_ c.37.1.9 (A:) Kinesin 68.9 1.6 0.00012 40.5 3.9 25 165-189 71-97 (354)
158 d1jj7a_ c.37.1.12 (A:) Peptide 68.2 1 7.6E-05 39.6 2.2 17 171-187 39-55 (251)
159 d1sdma_ c.37.1.9 (A:) Kinesin 67.7 1.5 0.00011 40.9 3.4 25 165-189 66-92 (364)
160 d1xjca_ c.37.1.10 (A:) Molybdo 67.5 2.9 0.00021 33.6 4.9 22 176-198 5-26 (165)
161 d2zfia1 c.37.1.9 (A:4-352) Kin 67.4 1.8 0.00013 40.0 3.9 25 165-189 78-104 (349)
162 d1rz3a_ c.37.1.6 (A:) Hypothet 67.1 1.1 8E-05 37.1 2.1 14 176-189 26-39 (198)
163 d1x88a1 c.37.1.9 (A:18-362) Ki 67.1 1.7 0.00012 40.2 3.6 25 165-189 72-98 (345)
164 d1ny5a2 c.37.1.20 (A:138-384) 66.8 2 0.00014 37.6 3.9 22 168-189 19-40 (247)
165 d2ncda_ c.37.1.9 (A:) Kinesin 66.7 1.6 0.00012 40.7 3.4 26 164-189 115-142 (368)
166 d1wrba1 c.37.1.19 (A:164-401) 66.4 15 0.0011 31.2 9.9 74 381-458 98-180 (238)
167 d1v5wa_ c.37.1.11 (A:) Meiotic 66.3 2.2 0.00016 36.8 4.1 22 171-192 36-57 (258)
168 d1u94a1 c.37.1.11 (A:6-268) Re 66.0 3.2 0.00024 36.5 5.1 25 171-195 53-77 (263)
169 d1l2ta_ c.37.1.12 (A:) MJ0796 65.6 1.3 9.4E-05 38.4 2.2 23 171-195 30-52 (230)
170 d1svma_ c.37.1.20 (A:) Papillo 64.5 2.7 0.00019 39.0 4.5 19 171-189 153-171 (362)
171 d3b60a1 c.37.1.12 (A:329-581) 64.5 1.2 8.9E-05 39.2 1.9 18 171-188 40-57 (253)
172 d1s96a_ c.37.1.1 (A:) Guanylat 64.4 2 0.00014 36.4 3.2 18 171-188 1-18 (205)
173 d1f9va_ c.37.1.9 (A:) Kinesin 64.0 1.8 0.00013 39.9 3.1 25 165-189 74-100 (342)
174 d1uj2a_ c.37.1.6 (A:) Uridine- 63.7 1.4 0.00011 37.2 2.2 14 176-189 6-19 (213)
175 d1t6na_ c.37.1.19 (A:) Spliceo 63.6 15 0.0011 30.4 9.1 75 381-458 69-153 (207)
176 d1ckea_ c.37.1.1 (A:) CMP kina 63.5 1.8 0.00013 36.5 2.9 17 175-191 6-22 (225)
177 d1gkub1 c.37.1.16 (B:1-250) He 63.4 13 0.00091 31.5 8.7 76 380-457 85-169 (237)
178 d1kgda_ c.37.1.1 (A:) Guanylat 62.9 1.8 0.00013 35.8 2.5 17 172-188 3-19 (178)
179 d1mv5a_ c.37.1.12 (A:) Multidr 62.1 1.4 0.00011 38.4 1.9 17 171-187 27-43 (242)
180 d1r7ra3 c.37.1.20 (A:471-735) 61.8 1.9 0.00014 38.1 2.8 17 172-188 41-57 (265)
181 d1bifa1 c.37.1.7 (A:37-249) 6- 60.0 1.8 0.00013 36.1 2.2 16 175-190 5-20 (213)
182 d1q3ta_ c.37.1.1 (A:) CMP kina 59.9 2.3 0.00017 35.9 2.9 17 175-191 6-22 (223)
183 d1vi2a1 c.2.1.7 (A:107-288) Pu 58.9 12 0.00085 30.4 7.3 82 170-268 16-99 (182)
184 d1qdea_ c.37.1.19 (A:) Initiat 58.6 6.2 0.00045 33.2 5.5 74 380-458 77-159 (212)
185 d1veca_ c.37.1.19 (A:) DEAD bo 58.6 16 0.0011 30.3 8.2 73 380-456 70-152 (206)
186 d2awna2 c.37.1.12 (A:4-235) Ma 57.8 2.6 0.00019 36.4 2.8 17 171-187 25-41 (232)
187 d1r6bx3 c.37.1.20 (X:437-751) 57.3 2.6 0.00019 38.3 2.8 16 174-189 54-69 (315)
188 d1knxa2 c.91.1.2 (A:133-309) H 56.6 2.6 0.00019 34.6 2.5 20 171-190 14-33 (177)
189 d2fnaa2 c.37.1.20 (A:1-283) Ar 56.2 7.5 0.00055 33.4 5.9 18 171-188 28-45 (283)
190 d1yrba1 c.37.1.10 (A:1-244) AT 56.1 5.5 0.0004 33.8 4.8 13 175-187 3-15 (244)
191 d1sq5a_ c.37.1.6 (A:) Pantothe 56.0 5.7 0.00042 35.7 5.0 15 175-189 83-97 (308)
192 d1mo6a1 c.37.1.11 (A:1-269) Re 55.7 6.8 0.00049 34.4 5.3 51 171-234 59-109 (269)
193 d1s2ma1 c.37.1.19 (A:46-251) P 55.2 26 0.0019 28.7 9.1 75 380-458 68-151 (206)
194 d1g2912 c.37.1.12 (1:1-240) Ma 54.8 3.1 0.00022 36.1 2.8 18 171-188 28-45 (240)
195 d1sgwa_ c.37.1.12 (A:) Putativ 54.7 3.1 0.00022 35.0 2.7 18 171-188 26-43 (200)
196 d1kkma_ c.91.1.2 (A:) HPr kina 54.6 3.1 0.00022 34.2 2.6 20 171-190 13-32 (176)
197 d1xpua3 c.37.1.11 (A:129-417) 54.6 10 0.00076 33.5 6.4 26 163-188 31-59 (289)
198 d1v43a3 c.37.1.12 (A:7-245) Hy 54.5 3.1 0.00023 36.0 2.8 17 171-187 31-47 (239)
199 d2exfa1 g.40.1.1 (A:12-53) HIV 54.4 2.5 0.00018 25.6 1.5 14 36-49 22-35 (42)
200 d2hyda1 c.37.1.12 (A:324-578) 54.0 2.9 0.00021 36.6 2.5 18 171-188 43-60 (255)
201 d2eyqa2 c.37.1.19 (A:349-465) 54.0 7.6 0.00055 29.2 4.7 74 368-457 24-97 (117)
202 d1nija1 c.37.1.10 (A:2-223) Hy 53.8 5.2 0.00038 34.0 4.2 13 175-187 6-18 (222)
203 d3dhwc1 c.37.1.12 (C:1-240) Me 53.3 2.9 0.00021 36.2 2.4 17 171-187 30-46 (240)
204 d1ko7a2 c.91.1.2 (A:130-298) H 52.6 3.4 0.00025 33.6 2.5 20 171-190 14-33 (169)
205 d1wp9a2 c.37.1.19 (A:201-486) 52.4 29 0.0021 30.0 9.5 77 208-294 159-247 (286)
206 d3d31a2 c.37.1.12 (A:1-229) Su 51.7 2.2 0.00016 36.8 1.2 17 171-187 25-41 (229)
207 d2qm8a1 c.37.1.10 (A:5-327) Me 51.4 36 0.0026 30.3 9.9 75 260-334 166-250 (323)
208 g1xew.1 c.37.1.12 (X:,Y:) Smc 50.8 3.9 0.00029 36.8 3.0 22 175-198 29-50 (329)
209 d1gm5a4 c.37.1.19 (A:550-755) 50.4 6.7 0.00048 32.9 4.2 95 208-312 27-132 (206)
210 d1r0wa_ c.37.1.12 (A:) Cystic 50.2 3.6 0.00026 36.6 2.5 17 171-187 61-77 (281)
211 d1qhla_ c.37.1.12 (A:) Cell di 49.5 1.3 9.7E-05 36.6 -0.6 22 175-198 27-48 (222)
212 d1ys7a2 c.23.1.1 (A:7-127) Tra 49.5 45 0.0032 24.5 10.6 83 211-325 2-84 (121)
213 d1qvra3 c.37.1.20 (A:536-850) 49.4 3.6 0.00026 37.3 2.4 17 174-190 55-71 (315)
214 d1em8a_ c.128.1.1 (A:) DNA pol 49.2 8.5 0.00062 30.2 4.5 116 368-507 23-140 (147)
215 d1xp8a1 c.37.1.11 (A:15-282) R 49.0 8.9 0.00065 33.6 5.0 39 171-219 56-94 (268)
216 d1oxxk2 c.37.1.12 (K:1-242) Gl 49.0 2.4 0.00017 36.8 1.0 17 171-187 30-46 (242)
217 d2vp4a1 c.37.1.1 (A:12-208) De 48.9 3.6 0.00026 33.9 2.2 14 175-188 12-25 (197)
218 d1w44a_ c.37.1.11 (A:) NTPase 48.8 3.4 0.00025 37.5 2.1 15 175-189 126-140 (321)
219 d1wp9a1 c.37.1.19 (A:1-200) pu 48.4 39 0.0029 27.0 9.1 72 381-457 52-132 (200)
220 d1tq1a_ c.46.1.3 (A:) Thiosulf 48.1 9.3 0.00068 28.6 4.4 41 377-418 68-109 (119)
221 d1uf9a_ c.37.1.1 (A:) Dephosph 48.0 3.6 0.00027 33.8 2.1 14 177-190 8-21 (191)
222 d1nn5a_ c.37.1.1 (A:) Thymidyl 47.9 7.9 0.00057 32.4 4.3 18 172-189 3-20 (209)
223 d2onka1 c.37.1.12 (A:1-240) Mo 47.7 4.2 0.00031 35.1 2.5 13 175-187 27-39 (240)
224 d1vhta_ c.37.1.1 (A:) Dephosph 47.3 3.9 0.00029 34.3 2.2 16 175-190 6-21 (208)
225 d1ry6a_ c.37.1.9 (A:) Kinesin 47.3 4 0.00029 37.2 2.4 19 171-189 82-102 (330)
226 d2fh5b1 c.37.1.8 (B:63-269) Si 46.4 4.3 0.00031 33.8 2.3 15 173-187 1-15 (207)
227 d1lkxa_ c.37.1.9 (A:) Myosin S 46.1 6.3 0.00046 39.8 3.9 34 164-198 75-111 (684)
228 d1w1wa_ c.37.1.12 (A:) Smc hea 45.6 5.5 0.0004 37.1 3.2 22 175-198 28-49 (427)
229 d1jjva_ c.37.1.1 (A:) Dephosph 43.2 6 0.00043 33.0 2.7 14 176-189 6-19 (205)
230 d2p67a1 c.37.1.10 (A:1-327) LA 43.2 45 0.0033 29.7 9.1 27 171-198 51-79 (327)
231 d1ihua1 c.37.1.10 (A:1-296) Ar 43.1 11 0.00083 32.8 4.9 35 173-217 9-43 (296)
232 d1a7ja_ c.37.1.6 (A:) Phosphor 43.0 5.3 0.00039 35.5 2.4 14 175-188 7-20 (288)
233 d1yt8a4 c.46.1.2 (A:243-372) T 42.7 12 0.0009 28.4 4.4 38 379-417 78-115 (130)
234 d2jdid3 c.37.1.11 (D:82-357) C 42.4 19 0.0014 31.4 6.1 25 164-188 57-84 (276)
235 d1gsia_ c.37.1.1 (A:) Thymidyl 41.5 11 0.00077 31.1 4.1 15 175-189 3-17 (208)
236 d2mysa2 c.37.1.9 (A:4-33,A:80- 41.3 19 0.0014 36.7 6.8 93 104-198 43-148 (794)
237 d1m7ga_ c.37.1.4 (A:) Adenosin 40.9 5.4 0.00039 33.5 2.0 18 172-189 24-41 (208)
238 d1ji0a_ c.37.1.12 (A:) Branche 40.2 6.5 0.00047 33.9 2.5 18 171-188 31-48 (240)
239 d4tmka_ c.37.1.1 (A:) Thymidyl 40.0 8 0.00058 32.1 3.1 19 172-190 2-20 (210)
240 g1ii8.1 c.37.1.12 (A:,B:) Rad5 39.8 8.4 0.00061 34.2 3.4 16 174-189 25-40 (369)
241 d1odfa_ c.37.1.6 (A:) Hypothet 39.8 7.5 0.00055 34.4 2.9 13 177-189 32-44 (286)
242 g1f2t.1 c.37.1.12 (A:,B:) Rad5 39.7 8.6 0.00063 33.3 3.4 14 175-188 26-39 (292)
243 d2p6ra4 c.37.1.19 (A:203-403) 39.7 40 0.0029 27.5 7.6 76 210-291 40-145 (201)
244 d1d0xa2 c.37.1.9 (A:2-33,A:80- 39.5 12 0.00091 37.6 4.9 94 104-199 45-151 (712)
245 d1ihua2 c.37.1.10 (A:308-586) 38.9 15 0.0011 31.8 4.9 25 171-195 18-43 (279)
246 d1br2a2 c.37.1.9 (A:80-789) My 37.6 12 0.00086 37.8 4.4 37 161-198 77-116 (710)
247 d1c9ka_ c.37.1.11 (A:) Adenosy 37.5 11 0.00082 30.6 3.5 46 175-234 2-47 (180)
248 d2g9na1 c.37.1.19 (A:21-238) I 36.4 3.9 0.00029 34.7 0.4 75 380-457 79-162 (218)
249 d1z5za1 c.37.1.19 (A:663-906) 36.3 66 0.0048 26.8 8.9 97 180-294 65-166 (244)
250 d2b2na1 c.37.1.19 (A:26-333) T 35.8 25 0.0018 31.1 6.0 90 381-470 14-120 (308)
251 d1b0ua_ c.37.1.12 (A:) ATP-bin 35.8 8.4 0.00061 33.5 2.5 18 171-188 27-44 (258)
252 d1z3ix1 c.37.1.19 (X:390-735) 35.7 93 0.0068 27.6 10.2 97 180-294 97-199 (346)
253 d1vl1a_ c.124.1.1 (A:) 6-phosp 35.6 23 0.0017 29.5 5.4 56 221-294 14-69 (218)
254 d1p5zb_ c.37.1.1 (B:) Deoxycyt 35.4 7.2 0.00053 33.0 2.0 17 172-188 2-18 (241)
255 d1htwa_ c.37.1.18 (A:) Hypothe 34.8 7.7 0.00056 31.0 1.9 13 175-187 36-48 (158)
256 d1l7vc_ c.37.1.12 (C:) ABC tra 34.6 8.4 0.00061 32.9 2.3 18 171-188 24-41 (231)
257 d1u0la2 c.37.1.8 (A:69-293) Pr 34.2 13 0.00093 31.5 3.4 29 159-187 82-110 (225)
258 d2gvia2 g.39.1.18 (A:169-201) 33.8 3.5 0.00026 22.0 -0.3 10 38-47 5-14 (33)
259 d2bmfa2 c.37.1.14 (A:178-482) 33.0 17 0.0012 31.7 4.3 56 209-268 177-232 (305)
260 d1deka_ c.37.1.1 (A:) Deoxynuc 33.0 11 0.00081 31.9 2.9 16 175-190 4-19 (241)
261 d1e69a_ c.37.1.12 (A:) Smc hea 32.6 9.2 0.00067 33.7 2.3 14 175-188 27-40 (308)
262 d1qxna_ c.46.1.3 (A:) Polysulf 32.5 26 0.0019 26.7 4.8 38 379-417 80-118 (137)
263 d1h65a_ c.37.1.8 (A:) Chloropl 32.3 11 0.00081 32.5 2.8 15 173-187 33-47 (257)
264 d1c7na_ c.67.1.3 (A:) Cystalys 32.1 1.6E+02 0.012 26.0 12.8 95 111-222 16-125 (394)
265 d1xj1a_ g.3.6.5 (A:) Vhv1.1, p 31.7 5.2 0.00038 23.7 0.2 27 26-52 18-44 (47)
266 d1kk8a2 c.37.1.9 (A:1-28,A:77- 31.7 17 0.0012 37.1 4.4 93 104-198 41-146 (789)
267 d1a6bb_ g.40.1.1 (B:) Zinc fin 31.5 11 0.00077 21.8 1.6 21 29-49 3-23 (40)
268 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 31.4 9.1 0.00066 30.5 1.9 15 174-188 15-29 (186)
269 d1r8sa_ c.37.1.8 (A:) ADP-ribo 30.7 11 0.00078 29.1 2.2 14 174-187 2-15 (160)
270 d1gmxa_ c.46.1.3 (A:) Sulfurtr 30.7 22 0.0016 25.7 4.0 39 379-418 56-95 (108)
271 d1vpla_ c.37.1.12 (A:) Putativ 30.7 9.5 0.00069 32.7 1.9 18 171-188 27-44 (238)
272 d1w7ja2 c.37.1.9 (A:63-792) My 30.4 15 0.0011 37.2 3.7 37 162-199 81-120 (730)
273 d1g6ha_ c.37.1.12 (A:) MJ1267 30.2 12 0.00085 32.4 2.5 18 171-188 29-46 (254)
274 d1krwa_ c.23.1.1 (A:) NTRC rec 29.9 94 0.0069 22.5 11.7 88 210-329 3-90 (123)
275 d1wmsa_ c.37.1.8 (A:) Rab9a {H 29.3 12 0.00085 29.8 2.2 13 175-187 9-21 (174)
276 d1ksha_ c.37.1.8 (A:) ADP-ribo 28.9 12 0.00088 29.3 2.2 14 174-187 4-17 (165)
277 d1a1va2 c.37.1.14 (A:326-624) 28.9 25 0.0018 30.9 4.5 38 210-251 36-73 (299)
278 d1xhfa1 c.23.1.1 (A:2-122) Aer 28.0 1E+02 0.0074 22.3 12.5 88 210-330 2-89 (121)
279 d1t5la1 c.37.1.19 (A:2-414) Nu 28.0 1.4E+02 0.01 27.2 10.1 116 356-474 34-179 (413)
280 d1yioa2 c.23.1.1 (A:3-130) Res 27.9 1E+02 0.0076 22.4 9.6 83 210-324 2-84 (128)
281 d1tmka_ c.37.1.1 (A:) Thymidyl 27.5 17 0.0013 30.2 3.1 18 172-189 3-20 (214)
282 d3raba_ c.37.1.8 (A:) Rab3a {R 27.5 12 0.00086 29.7 1.9 13 175-187 8-20 (169)
283 d1nrjb_ c.37.1.8 (B:) Signal r 27.0 13 0.00096 30.3 2.2 14 174-187 5-18 (209)
284 d2jdia3 c.37.1.11 (A:95-379) C 27.0 51 0.0037 28.7 6.3 26 164-189 57-85 (285)
285 d2ocpa1 c.37.1.1 (A:37-277) De 26.9 16 0.0011 30.8 2.8 15 174-188 4-18 (241)
286 d1mkya1 c.37.1.8 (A:2-172) Pro 26.8 14 0.001 29.2 2.2 13 175-187 3-15 (171)
287 d1urha2 c.46.1.2 (A:149-268) 3 26.4 60 0.0044 23.4 6.0 38 379-417 80-118 (120)
288 d1upta_ c.37.1.8 (A:) ADP-ribo 25.9 15 0.0011 28.5 2.2 14 174-187 7-20 (169)
289 d2cxxa1 c.37.1.8 (A:2-185) GTP 25.7 14 0.00099 29.5 2.0 14 174-187 2-15 (184)
290 d1oywa2 c.37.1.19 (A:1-206) Re 25.3 75 0.0055 25.4 7.0 75 381-456 65-145 (206)
291 d1gkub2 c.37.1.16 (B:251-498) 25.2 46 0.0033 28.0 5.7 72 210-293 25-101 (248)
292 d1qkka_ c.23.1.1 (A:) Transcri 25.2 1.3E+02 0.0091 22.4 11.6 43 284-328 44-86 (140)
293 d1zj6a1 c.37.1.8 (A:2-178) ADP 25.2 13 0.00095 29.4 1.8 14 174-187 17-30 (177)
294 d1svia_ c.37.1.8 (A:) Probable 25.0 15 0.0011 29.8 2.1 14 174-187 25-38 (195)
295 d2gc6a1 c.59.1.2 (A:297-425) F 24.9 85 0.0062 22.8 6.7 48 288-337 14-61 (129)
296 d1g3qa_ c.37.1.10 (A:) Cell di 24.9 32 0.0023 28.3 4.5 18 176-193 7-24 (237)
297 d2qtvb1 c.37.1.8 (B:24-189) SA 24.6 16 0.0012 28.0 2.2 13 175-187 3-15 (166)
298 d1moza_ c.37.1.8 (A:) ADP-ribo 24.4 14 0.0011 29.5 1.9 14 174-187 19-32 (182)
299 d2atva1 c.37.1.8 (A:5-172) Ras 24.2 14 0.001 29.2 1.7 13 175-187 5-17 (168)
300 d2f7sa1 c.37.1.8 (A:5-190) Rab 24.1 16 0.0012 29.2 2.2 13 175-187 8-20 (186)
301 d1z06a1 c.37.1.8 (A:32-196) Ra 24.0 15 0.0011 28.7 1.9 13 175-187 5-17 (165)
302 d2a5ja1 c.37.1.8 (A:9-181) Rab 23.5 15 0.0011 29.0 1.9 13 175-187 6-18 (173)
303 d1z2aa1 c.37.1.8 (A:8-171) Rab 23.2 18 0.0013 28.3 2.2 13 175-187 5-17 (164)
304 d1cp2a_ c.37.1.10 (A:) Nitroge 23.1 31 0.0023 29.4 4.1 21 175-195 4-24 (269)
305 d1i2ma_ c.37.1.8 (A:) Ran {Hum 23.0 15 0.0011 29.0 1.8 13 175-187 6-18 (170)
306 d2erxa1 c.37.1.8 (A:6-176) di- 22.9 18 0.0013 28.4 2.2 13 175-187 5-17 (171)
307 d2bv3a2 c.37.1.8 (A:7-282) Elo 22.8 20 0.0015 31.3 2.7 17 173-189 7-23 (276)
308 d2gj8a1 c.37.1.8 (A:216-376) P 22.8 16 0.0011 28.4 1.8 14 174-187 3-16 (161)
309 d1hyqa_ c.37.1.10 (A:) Cell di 22.6 43 0.0031 27.4 4.9 18 176-193 6-23 (232)
310 d1wf3a1 c.37.1.8 (A:3-180) GTP 22.5 18 0.0013 28.6 2.2 13 175-187 8-20 (178)
311 d2c07a1 c.2.1.2 (A:54-304) bet 22.3 1.5E+02 0.011 24.6 8.6 59 381-440 34-95 (251)
312 d1luaa1 c.2.1.7 (A:98-288) Met 22.3 53 0.0039 26.2 5.3 79 170-268 21-100 (191)
313 d1kaoa_ c.37.1.8 (A:) Rap2a {H 22.3 17 0.0012 28.5 1.9 14 174-187 5-18 (167)
314 d1zd9a1 c.37.1.8 (A:18-181) AD 22.2 18 0.0013 28.2 2.1 14 174-187 4-17 (164)
315 d1udxa2 c.37.1.8 (A:157-336) O 22.1 14 0.001 29.4 1.4 15 174-188 3-17 (180)
316 d2bmea1 c.37.1.8 (A:6-179) Rab 21.9 19 0.0014 28.5 2.1 13 175-187 8-20 (174)
317 d1susa1 c.66.1.1 (A:21-247) Ca 21.6 2E+02 0.015 23.5 12.4 127 158-323 43-171 (227)
318 d1tuea_ c.37.1.20 (A:) Replica 21.3 23 0.0017 29.3 2.5 43 144-188 23-69 (205)
319 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 21.3 19 0.0014 28.5 2.1 14 174-187 4-17 (177)
320 d1yb1a_ c.2.1.2 (A:) 17-beta-h 21.3 1.5E+02 0.011 24.4 8.4 79 170-267 5-91 (244)
321 d1u0ja_ c.37.1.20 (A:) Rep 40 21.1 65 0.0047 27.6 5.8 42 145-188 74-120 (267)
322 d1r2qa_ c.37.1.8 (A:) Rab5a {H 21.0 19 0.0014 28.4 1.9 14 174-187 8-21 (170)
323 d2afhe1 c.37.1.10 (E:1-289) Ni 21.0 38 0.0028 29.1 4.3 20 175-194 5-24 (289)
324 d2erya1 c.37.1.8 (A:10-180) r- 20.8 18 0.0013 28.5 1.8 14 174-187 7-20 (171)
325 d2fn4a1 c.37.1.8 (A:24-196) r- 20.7 20 0.0015 28.3 2.1 14 174-187 8-21 (173)
326 d1b5pa_ c.67.1.1 (A:) Aspartat 20.7 2.5E+02 0.018 24.4 10.5 11 287-297 199-209 (382)
327 d1lnza2 c.37.1.8 (A:158-342) O 20.5 22 0.0016 28.3 2.3 14 174-187 3-16 (185)
328 d1z08a1 c.37.1.8 (A:17-183) Ra 20.5 22 0.0016 27.8 2.2 13 175-187 6-18 (167)
329 d2f9la1 c.37.1.8 (A:8-182) Rab 20.5 22 0.0016 28.1 2.2 13 175-187 7-19 (175)
330 d1x1ra1 c.37.1.8 (A:10-178) Ra 20.3 20 0.0014 28.3 1.9 13 175-187 7-19 (169)
331 d1fzqa_ c.37.1.8 (A:) ADP-ribo 20.3 21 0.0015 28.1 2.1 14 174-187 18-31 (176)
332 d1fx0a3 c.37.1.11 (A:97-372) C 20.3 30 0.0022 30.1 3.3 20 170-189 65-84 (276)
333 d1z0fa1 c.37.1.8 (A:8-173) Rab 20.2 20 0.0015 28.0 1.9 13 175-187 7-19 (166)
334 d1ky3a_ c.37.1.8 (A:) Rab-rela 20.2 20 0.0014 28.2 1.9 13 175-187 5-17 (175)
No 1
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.7e-41 Score=316.13 Aligned_cols=207 Identities=29% Similarity=0.582 Sum_probs=193.8
Q ss_pred CcccCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCc
Q 009500 132 APILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNP 211 (533)
Q Consensus 132 ~~~~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~ 211 (533)
....+|++++|++.++++|.+.||..|||+|.++||.++.|+|+++.|+||||||++|++|++.++.. ....+
T Consensus 14 ~~~~sF~~l~L~~~l~~~L~~~g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTlayllPil~~l~~-------~~~~~ 86 (222)
T d2j0sa1 14 DVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDI-------QVRET 86 (222)
T ss_dssp CCCCSGGGGCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHTCCT-------TSCSC
T ss_pred CCCCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhhhhcccccccccc-------cccCc
Confidence 34568999999999999999999999999999999999999999999999999999999999987753 24567
Q ss_pred eEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEe
Q 009500 212 LAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLD 291 (533)
Q Consensus 212 ~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvD 291 (533)
++||++||++|+.|+++.++++++..++++..++||.....+...+..+++|+|+||++|.+++......+++++++|+|
T Consensus 87 ~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~~~~~Ilv~TPgrl~~~~~~~~~~~~~l~~lVlD 166 (222)
T d2j0sa1 87 QALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLD 166 (222)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHHHCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEE
T ss_pred eeEEecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhccCCeEEeCCCCcHHhcccccccccccceeeeec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhcchHHHHHHHHHhC-CCCcEEEecccCcHHHHHHHHhhcCCeEEEEeC
Q 009500 292 EVDCMLQRGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMSSSISKDIVVVSVG 345 (533)
Q Consensus 292 Eah~~~~~~~~~~i~~i~~~~-~~~q~i~~SAT~~~~~~~~~~~~~~~~~~i~~~ 345 (533)
|||+|++.+|...+..|++.+ +.+|+++||||+++++.++++.++.+|+.+.++
T Consensus 167 EaD~ll~~~f~~~i~~I~~~l~~~~Q~ilfSAT~~~~v~~l~~~~l~~Pv~I~V~ 221 (222)
T d2j0sa1 167 EADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVK 221 (222)
T ss_dssp THHHHTSTTTHHHHHHHHTTSCTTCEEEEEESCCCHHHHTTGGGTCSSCEEECCC
T ss_pred chhHhhhcCcHHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCEEEEEe
Confidence 999999999999999999998 568999999999999999999999999888654
No 2
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=9.2e-40 Score=302.05 Aligned_cols=202 Identities=33% Similarity=0.568 Sum_probs=185.9
Q ss_pred cCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEE
Q 009500 135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAM 214 (533)
Q Consensus 135 ~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~L 214 (533)
.+|++++|++.++++|.+.||..|||+|.++||.+++|+|++++||||||||++|++|++.++.. ...++++|
T Consensus 3 ~~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllP~l~~~~~-------~~~~~~~l 75 (206)
T d1veca_ 3 NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL-------KKDNIQAM 75 (206)
T ss_dssp SSGGGSCCCHHHHHHHHTTTCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHHHHHHHHHHHCCT-------TSCSCCEE
T ss_pred CChhccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeeccCccccccccccchhhcccc-------cccCcceE
Confidence 58999999999999999999999999999999999999999999999999999999999987653 24678899
Q ss_pred EEcccHHHHHHHHHHHHHHhcCCC-CeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEecc
Q 009500 215 VLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEV 293 (533)
Q Consensus 215 il~Ptr~L~~Q~~~~~~~~~~~~~-~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEa 293 (533)
|++||++|+.|+++.+..+..... .......|+.....+...+..+++|+|+||+++.+++..+...+++++++|+|||
T Consensus 76 il~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ivv~TPgrl~~~~~~~~~~~~~l~~lVlDEa 155 (206)
T d1veca_ 76 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEA 155 (206)
T ss_dssp EECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEETH
T ss_pred EEeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHHHhccCeEEeCCccccccccchhccccccceEEEecc
Confidence 999999999999999998876543 6677778888888877788889999999999999999999999999999999999
Q ss_pred chhhhcchHHHHHHHHHhC-CCCcEEEecccCcHHHHHHHHhhcCCeEEEE
Q 009500 294 DCMLQRGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMSSSISKDIVVVS 343 (533)
Q Consensus 294 h~~~~~~~~~~i~~i~~~~-~~~q~i~~SAT~~~~~~~~~~~~~~~~~~i~ 343 (533)
|+|++.+|..++..|+..+ +..|++++|||+++++.++++.++.+|+.++
T Consensus 156 D~ll~~~f~~~i~~I~~~~~~~~Q~~l~SAT~~~~v~~l~~~~l~~P~~I~ 206 (206)
T d1veca_ 156 DKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLEKPYEIN 206 (206)
T ss_dssp HHHTSTTTHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCEEEC
T ss_pred ccccccchHHHHHHHHHhCCCCCEEEEEEecCCHHHHHHHHHHCCCCEEEC
Confidence 9999999999999999999 6689999999999999999999999998763
No 3
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=100.00 E-value=5.5e-40 Score=310.15 Aligned_cols=224 Identities=35% Similarity=0.603 Sum_probs=201.3
Q ss_pred CceEecC--CCCCcccCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHh
Q 009500 122 EINVKGD--AVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCAN 199 (533)
Q Consensus 122 ~i~~~~~--~~p~~~~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~ 199 (533)
++...|. ..|.++.+|++++|++.++++|.+.||..|+|+|.++||.++.|+|++++||||||||++|++|++.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~F~~l~l~~~l~~~L~~~g~~~pt~iQ~~~ip~il~g~dvvi~a~TGsGKTlayllp~l~~l~~ 85 (238)
T d1wrba1 6 PVSVTGPDYSATNVIENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINHLVC 85 (238)
T ss_dssp CCCEECCSSSCCSCCCSSGGGSCCCSTTTTTTTTTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred ceeeeCCCCCCCCccCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHhhhhhCCCCEEEECCCCCCcceeeHHHHHHHHHh
Confidence 3444544 55778999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred hhhcc--cCCCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHc
Q 009500 200 IRLHH--SQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMK 277 (533)
Q Consensus 200 ~~~~~--~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~ 277 (533)
.+... .....++++||++||++|+.|+.+.+..++...++++..+.|+.....+......+++|+|+||++|.+++..
T Consensus 86 ~~~~~~~~~~~~~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ivV~TP~~l~~~~~~ 165 (238)
T d1wrba1 86 QDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEK 165 (238)
T ss_dssp TCC------CCBCCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHHHHSSCCSEEEECHHHHHHHHHT
T ss_pred cccccccccCCCCceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHhhcccCCceeecCHHHHHhHHcc
Confidence 43211 1234578999999999999999999999999999999999999998888888888999999999999999999
Q ss_pred CCCCCCCeeEEEEeccchhhhcchHHHHHHHHHhCC-----CCcEEEecccCcHHHHHHHHhhcCCeEEEEeC
Q 009500 278 HDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAIS-----LPQILMYSATISQEVEKMSSSISKDIVVVSVG 345 (533)
Q Consensus 278 ~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~~-----~~q~i~~SAT~~~~~~~~~~~~~~~~~~i~~~ 345 (533)
+...+.+++++|+||||+|++.+|...+..|++++. .+|++++|||++.+++.+++.++.+|+.+.+|
T Consensus 166 ~~~~l~~v~~lViDEaD~ll~~~f~~~i~~Il~~~~~~~~~~~Q~il~SAT~~~~v~~l~~~~~~~p~~i~vg 238 (238)
T d1wrba1 166 NKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVG 238 (238)
T ss_dssp TSBCCTTCCEEEEETHHHHHHTTCHHHHHHHHHSSCCCCGGGCEEEEEESSCCHHHHHHHHHHCSSCEEEEEC
T ss_pred CceeccccceeeeehhhhhhhhccHHHHHHHHHHhcCCCCCCCEEEEEeeeCCHHHHHHHHHHCCCCEEEEeC
Confidence 988999999999999999999999999999999763 56999999999999999999999999988764
No 4
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1e-39 Score=303.80 Aligned_cols=210 Identities=34% Similarity=0.569 Sum_probs=189.4
Q ss_pred CCCCcccCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCC
Q 009500 129 AVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQ 208 (533)
Q Consensus 129 ~~p~~~~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~ 208 (533)
+.|.++.+|++++|++.++++|.+.||..|||+|.++||.++.|+|++++|+||||||++|++|++.++.. ..
T Consensus 6 ~~~e~i~sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllp~l~~i~~-------~~ 78 (218)
T d2g9na1 6 NWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL-------DL 78 (218)
T ss_dssp CCCCCCCCGGGSCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHHHHHHHHHCCT-------TC
T ss_pred CCCCccCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhhhhhhhheecc-------cc
Confidence 45778999999999999999999999999999999999999999999999999999999999999988743 24
Q ss_pred CCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHH-HcCCceeecChHHHHHHHHcCCCCCCCeeE
Q 009500 209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRI-QQGVELIVGTPGRLIDLLMKHDIELDDIRM 287 (533)
Q Consensus 209 ~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l-~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~ 287 (533)
.++++||++||++||.|+++.++.+....+.....+.++.....+.... ..+++|+|+||+++.+++.++...++++++
T Consensus 79 ~~~~alil~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~l~~ 158 (218)
T d2g9na1 79 KATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 158 (218)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCSTTTSSSSCCCSEEEECHHHHHHHHHTTSSCSTTCCE
T ss_pred cCccEEEEcccchhhhhHHHHHhhhccccceeEEeeecccchhHHHHHHhcCCCEEEEeCChhHHHHHhcCCcccccceE
Confidence 6788999999999999999999999999999988888876655543332 245899999999999999998889999999
Q ss_pred EEEeccchhhhcchHHHHHHHHHhC-CCCcEEEecccCcHHHHHHHHhhcCCeEEEEeC
Q 009500 288 FVLDEVDCMLQRGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMSSSISKDIVVVSVG 345 (533)
Q Consensus 288 vVvDEah~~~~~~~~~~i~~i~~~~-~~~q~i~~SAT~~~~~~~~~~~~~~~~~~i~~~ 345 (533)
+|+||||+|++.+|...+..|++.+ .+.|++++|||+++++.++++.++.+|+.+.+.
T Consensus 159 lVlDEaD~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT~~~~v~~~~~~~l~~pv~i~v~ 217 (218)
T d2g9na1 159 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVK 217 (218)
T ss_dssp EEEESHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCEEEECC
T ss_pred EEeeecchhhcCchHHHHHHHHHhCCCCCeEEEEEecCCHHHHHHHHHHCCCCEEEEEe
Confidence 9999999999999999999999999 468999999999999999999999999988764
No 5
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.6e-39 Score=300.00 Aligned_cols=209 Identities=29% Similarity=0.564 Sum_probs=185.8
Q ss_pred cCCCCCcccCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccC
Q 009500 127 GDAVPAPILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQ 206 (533)
Q Consensus 127 ~~~~p~~~~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~ 206 (533)
|.+.|.++.+|++++|++.++++|.+.||..|||+|.++||.++.|+|++++||||||||++|++|++.++..
T Consensus 2 ~~~~~~~~~sF~~l~l~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~~lp~i~~l~~------- 74 (212)
T d1qdea_ 2 QTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDT------- 74 (212)
T ss_dssp CBSCCCCCCCGGGGTCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHCCT-------
T ss_pred CCCCcccccChhhCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhhHhhhHhhhhc-------
Confidence 4567889999999999999999999999999999999999999999999999999999999999999988743
Q ss_pred CCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCee
Q 009500 207 NQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIR 286 (533)
Q Consensus 207 ~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~ 286 (533)
...+++++|++||++|+.|+...+..+............++.....+...+ ++++|+|+||+++..++..+.+.+++++
T Consensus 75 ~~~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~IvI~TP~~l~~~~~~~~~~l~~l~ 153 (212)
T d1qdea_ 75 SVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQIVVGTPGRVFDNIQRRRFRTDKIK 153 (212)
T ss_dssp TCCSCCEEEECSSHHHHHHHHHHHHHHTTTSCCCEEEECC----------C-TTCSEEEECHHHHHHHHHTTSSCCTTCC
T ss_pred cCCCcceEEEcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHHh-cCCcEEEECCCccccccccCceecCcce
Confidence 346789999999999999999999999988888888888887777665554 4689999999999999999999999999
Q ss_pred EEEEeccchhhhcchHHHHHHHHHhC-CCCcEEEecccCcHHHHHHHHhhcCCeEEEE
Q 009500 287 MFVLDEVDCMLQRGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMSSSISKDIVVVS 343 (533)
Q Consensus 287 ~vVvDEah~~~~~~~~~~i~~i~~~~-~~~q~i~~SAT~~~~~~~~~~~~~~~~~~i~ 343 (533)
++|+||||+|++.+|...+..|++.+ +..|++++|||+++.+.++++.++.+|+.+.
T Consensus 154 ~lVlDEad~lld~~f~~~v~~I~~~~~~~~Q~vl~SAT~~~~v~~l~~~~l~~Pv~i~ 211 (212)
T d1qdea_ 154 MFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRIL 211 (212)
T ss_dssp EEEEETHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESSCCHHHHHHHHHHCSSCEEEC
T ss_pred EEeehhhhhhcccchHHHHHHHHHhCCCCCeEEEEEeeCCHHHHHHHHHHCCCCEEEe
Confidence 99999999999999999999999999 5789999999999999999999999998775
No 6
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=9.2e-39 Score=295.51 Aligned_cols=202 Identities=31% Similarity=0.533 Sum_probs=183.4
Q ss_pred cCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEE
Q 009500 135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAM 214 (533)
Q Consensus 135 ~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~L 214 (533)
.+|++++|++.++++|.+.||..|||+|.++||.+++|+|+++.||||||||++|++|++.++.. ...+++++
T Consensus 1 s~F~dl~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla~~lp~l~~~~~-------~~~~~~~l 73 (207)
T d1t6na_ 1 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEP-------VTGQVSVL 73 (207)
T ss_dssp CCSTTSCCCHHHHHHHHHTTCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHCCC-------CTTCCCEE
T ss_pred CCccccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCeEEEeccccccccccccceeeeecc-------cCCCceEE
Confidence 37999999999999999999999999999999999999999999999999999999999987543 24567899
Q ss_pred EEcccHHHHHHHHHHHHHHhcCCC-CeEEEEEcCCchHHHHHHHH-cCCceeecChHHHHHHHHcCCCCCCCeeEEEEec
Q 009500 215 VLTPTRELCIQVEEQAKLLGKGLP-FKTALVVGGDAMARQVYRIQ-QGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292 (533)
Q Consensus 215 il~Ptr~L~~Q~~~~~~~~~~~~~-~~~~~~~gg~~~~~~~~~l~-~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDE 292 (533)
|++||++|+.|+.+.++.+....+ .+...++||.....+...+. .+++|+|+||+++.+++..+.+.++++.++|+||
T Consensus 74 il~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ilI~TP~rl~~~~~~~~~~l~~l~~lVlDE 153 (207)
T d1t6na_ 74 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDE 153 (207)
T ss_dssp EECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHHHHHHSCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEES
T ss_pred EEeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHHHHHhcCCCEEEeCcchhhhhccCCceeccccceeehhh
Confidence 999999999999999999988765 56778888888887777764 5689999999999999999888999999999999
Q ss_pred cchhhh-cchHHHHHHHHHhC-CCCcEEEecccCcHHHHHHHHhhcCCeEEEE
Q 009500 293 VDCMLQ-RGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMSSSISKDIVVVS 343 (533)
Q Consensus 293 ah~~~~-~~~~~~i~~i~~~~-~~~q~i~~SAT~~~~~~~~~~~~~~~~~~i~ 343 (533)
||+|++ .+|...+..|++.+ +.+|++++|||+++.++++++.++.+|+.+.
T Consensus 154 aD~ll~~~~~~~~i~~I~~~~~~~~Q~il~SAT~~~~v~~l~~~~l~~P~~I~ 206 (207)
T d1t6na_ 154 CDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 206 (207)
T ss_dssp HHHHHSSHHHHHHHHHHHHTSCSSSEEEEEESCCCTTTHHHHHTTCSSCEEEE
T ss_pred hhhhhhcCCcHHHHHHHHHhCCCCCEEEEEeeeCCHHHHHHHHHHCCCCEEEe
Confidence 999998 48999999999998 5789999999999999999999999998775
No 7
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=8.6e-38 Score=289.51 Aligned_cols=202 Identities=35% Similarity=0.606 Sum_probs=186.5
Q ss_pred ccCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCC-cEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCce
Q 009500 134 ILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGK-SLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPL 212 (533)
Q Consensus 134 ~~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~-~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~ 212 (533)
..+|+++++++.++++|.+.||..|+|+|.++||.++.|+ |++++||||+|||++|++|++.+... ..+++
T Consensus 3 ~msf~~l~l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~~~~~~~--------~~~~~ 74 (208)
T d1hv8a1 3 YMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNE--------NNGIE 74 (208)
T ss_dssp CCCGGGSSCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHHHHSCS--------SSSCC
T ss_pred ccCHHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeeccccccccc--------ccCcc
Confidence 4689999999999999999999999999999999999875 99999999999999999999876443 56789
Q ss_pred EEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEec
Q 009500 213 AMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDE 292 (533)
Q Consensus 213 ~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDE 292 (533)
+||++||++||.|+.++++.+....+.++...+|+.....+...+ ++++|+|+||++|.+++.++.+.+++++++|+||
T Consensus 75 ~lil~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l-~~~~IlV~TP~~l~~~l~~~~~~~~~l~~lViDE 153 (208)
T d1hv8a1 75 AIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKAL-KNANIVVGTPGRILDHINRGTLNLKNVKYFILDE 153 (208)
T ss_dssp EEEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHH-HTCSEEEECHHHHHHHHHTTCSCTTSCCEEEEET
T ss_pred eEEEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhc-CCCCEEEEChHHHHHHHHcCCCCcccCcEEEEEC
Confidence 999999999999999999999999899999999998888877665 5699999999999999999988999999999999
Q ss_pred cchhhhcchHHHHHHHHHhC-CCCcEEEecccCcHHHHHHHHhhcCCeEEEEe
Q 009500 293 VDCMLQRGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMSSSISKDIVVVSV 344 (533)
Q Consensus 293 ah~~~~~~~~~~i~~i~~~~-~~~q~i~~SAT~~~~~~~~~~~~~~~~~~i~~ 344 (533)
||+|++.++...+..|++.+ ++.|++++|||+|+++.++++.++.++..+..
T Consensus 154 ad~l~~~~~~~~i~~I~~~~~~~~Q~i~~SAT~~~~v~~~~~~~l~~~~~I~~ 206 (208)
T d1hv8a1 154 ADEMLNMGFIKDVEKILNACNKDKRILLFSATMPREILNLAKKYMGDYSFIKA 206 (208)
T ss_dssp HHHHHTTTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHHHHHHHCCSEEEEEC
T ss_pred hHHhhcCCChHHHHHHHHhCCCCCeEEEEEccCCHHHHHHHHHHCCCCeEEEE
Confidence 99999999999999999998 57899999999999999999999999987764
No 8
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.8e-37 Score=284.98 Aligned_cols=204 Identities=31% Similarity=0.578 Sum_probs=191.3
Q ss_pred cCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEE
Q 009500 135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAM 214 (533)
Q Consensus 135 ~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~L 214 (533)
.+|++++|++.++++|.+.||..|||+|.++||.++.|+|+++.||||||||++|++|++.++.. ...+++++
T Consensus 1 ~sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTlay~lp~i~~~~~-------~~~~~~~~ 73 (206)
T d1s2ma1 1 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKP-------KLNKIQAL 73 (206)
T ss_dssp CCGGGGCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCT-------TSCSCCEE
T ss_pred CChHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhhhhcccccccccc-------ccccccce
Confidence 37999999999999999999999999999999999999999999999999999999999987653 24567899
Q ss_pred EEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccc
Q 009500 215 VLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVD 294 (533)
Q Consensus 215 il~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah 294 (533)
+++|+++++.|.......+....++++...+|+.....+...+..+++|+|+||++|.+++..+.+.+.+++++|+||||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~Ili~TP~~l~~~l~~~~~~l~~l~~lV~DEaD 153 (206)
T d1s2ma1 74 IMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEAD 153 (206)
T ss_dssp EECSSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEESHH
T ss_pred eeccchhhhhhhhhhhhhcccccCeeEEeecCccchhhHHHHhcccceEEEECCcccccccccceeecccceEEEeechh
Confidence 99999999999999999999999999999999999998888888899999999999999999999999999999999999
Q ss_pred hhhhcchHHHHHHHHHhCC-CCcEEEecccCcHHHHHHHHhhcCCeEEEEeC
Q 009500 295 CMLQRGFRDQVMQIFRAIS-LPQILMYSATISQEVEKMSSSISKDIVVVSVG 345 (533)
Q Consensus 295 ~~~~~~~~~~i~~i~~~~~-~~q~i~~SAT~~~~~~~~~~~~~~~~~~i~~~ 345 (533)
+|++.+|...+..|++.++ .+|++++|||+|+.+.++++.++.+|+.+.++
T Consensus 154 ~l~~~~f~~~v~~I~~~l~~~~Q~il~SATl~~~v~~~~~~~l~~P~~I~~~ 205 (206)
T d1s2ma1 154 KMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLM 205 (206)
T ss_dssp HHSSHHHHHHHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEESCC
T ss_pred hhhhhhhHHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCEEEEee
Confidence 9999999999999999995 68999999999999999999999999888764
No 9
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=7.1e-35 Score=270.66 Aligned_cols=203 Identities=27% Similarity=0.486 Sum_probs=179.7
Q ss_pred cCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEE
Q 009500 135 LSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAM 214 (533)
Q Consensus 135 ~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~L 214 (533)
.+|++++|++.++++|++.||.+|||+|.++||.++.|+|++++||||||||++|++|++..+.. ....+..+
T Consensus 1 t~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTlayllp~l~~~~~-------~~~~~~~~ 73 (209)
T d1q0ua_ 1 TQFTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLLPIMEKIKP-------ERAEVQAV 73 (209)
T ss_dssp CCGGGSCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHHHHHHHHHHHCCT-------TSCSCCEE
T ss_pred CccccCCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEeecccccccceeeeeeecccccc-------cccccccc
Confidence 37999999999999999999999999999999999999999999999999999999999987653 24567799
Q ss_pred EEcccHHHHHHHHHHHHHHhcCCC----CeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEE
Q 009500 215 VLTPTRELCIQVEEQAKLLGKGLP----FKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVL 290 (533)
Q Consensus 215 il~Ptr~L~~Q~~~~~~~~~~~~~----~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVv 290 (533)
+++|+++++.+....+........ .....+.++.....+......+++|+|+||+++..++.+....+.+++++|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ilv~TP~~l~~~~~~~~~~~~~l~~lVi 153 (209)
T d1q0ua_ 74 ITAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKALEKLNVQPHIVIGTPGRINDFIREQALDVHTAHILVV 153 (209)
T ss_dssp EECSSHHHHHHHHHHHHHHHTTSCGGGCCCEEEECCCSHHHHTTCCCSSCCSEEEECHHHHHHHHHTTCCCGGGCCEEEE
T ss_pred ccccccchhHHHHHHHHhhhccccccccccccccccchhhHHHHHHhccCceEEEecCchhhhhhhhhccccccceEEEE
Confidence 999999999999888877655443 4556666666666655556678999999999999999998888999999999
Q ss_pred eccchhhhcchHHHHHHHHHhC-CCCcEEEecccCcHHHHHHHHhhcCCeEEEEe
Q 009500 291 DEVDCMLQRGFRDQVMQIFRAI-SLPQILMYSATISQEVEKMSSSISKDIVVVSV 344 (533)
Q Consensus 291 DEah~~~~~~~~~~i~~i~~~~-~~~q~i~~SAT~~~~~~~~~~~~~~~~~~i~~ 344 (533)
||||++++++|...+..|+..+ ++.|++++|||+|+++.++++.++.+|+.+.+
T Consensus 154 DEad~ll~~~f~~~v~~I~~~~~~~~Q~il~SATl~~~v~~l~~~~l~~p~~i~V 208 (209)
T d1q0ua_ 154 DEADLMLDMGFITDVDQIAARMPKDLQMLVFSATIPEKLKPFLKKYMENPTFVHV 208 (209)
T ss_dssp CSHHHHHHTTCHHHHHHHHHTSCTTCEEEEEESCCCGGGHHHHHHHCSSCEEEEC
T ss_pred eecccccccccHHHHHHHHHHCCCCCEEEEEEccCCHHHHHHHHHHCCCCEEEEe
Confidence 9999999999999999999998 67899999999999999999999999988764
No 10
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=100.00 E-value=1.7e-34 Score=284.21 Aligned_cols=272 Identities=14% Similarity=0.147 Sum_probs=186.9
Q ss_pred HhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCC
Q 009500 169 ALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGD 248 (533)
Q Consensus 169 i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~ 248 (533)
+.+|+++++.||||||||++|+.+++..+.. .+.++||++||++||.|+.+.++.+..... ....+
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~---------~~~~~lvi~Ptr~La~q~~~~l~~~~~~~~----~~~~~- 71 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVREAIK---------RGLRTLILAPTRVVAAEMEEALRGLPIRYQ----TPAIR- 71 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHHHHHH---------HTCCEEEEESSHHHHHHHHHHTTTSCCBCC----C-----
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHHHHHh---------cCCEEEEEccHHHHHHHHHHHHhcCCccee----eeEEe-
Confidence 3578999999999999999998888876654 356799999999999998887665432211 11100
Q ss_pred chHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchH--HHHHHHHHhCCCCcEEEecccCcH
Q 009500 249 AMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFR--DQVMQIFRAISLPQILMYSATISQ 326 (533)
Q Consensus 249 ~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~--~~i~~i~~~~~~~q~i~~SAT~~~ 326 (533)
........++++|++.|..+.... ..+.++++||+||+|++..+++. ..+..+ ...+..+++++|||++.
T Consensus 72 ------~~~~~~~~i~~~t~~~l~~~~~~~-~~~~~~~~vViDE~H~~~~~~~~~~~~l~~~-~~~~~~~~v~~SAT~~~ 143 (305)
T d2bmfa2 72 ------AEHTGREIVDLMCHATFTMRLLSP-IRVPNYNLIIMDEAHFTDPASIAARGYISTR-VEMGEAAGIFMTATPPG 143 (305)
T ss_dssp ----------CCCSEEEEEHHHHHHHHTSS-SCCCCCSEEEEESTTCCSHHHHHHHHHHHHH-HHHTSCEEEEECSSCTT
T ss_pred ------ecccCccccccCCcHHHHHHHhcC-ccccceeEEEeeeeeecchhhHHHHHHHHHh-hccccceEEEeecCCCc
Confidence 112245789999999987776543 45788999999999998765422 222221 22267899999999975
Q ss_pred HHHHHHHhhcCCeEEEEeCCCCCCCccceEEEEEecchhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcC
Q 009500 327 EVEKMSSSISKDIVVVSVGKPNMPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTG 406 (533)
Q Consensus 327 ~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~ 406 (533)
....... ...++... ........+...+ ..+ ....+++||||+++++++.+++.|. ..+
T Consensus 144 ~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~~-~~~---~~~~~~~lvf~~~~~~~~~l~~~L~-~~~ 202 (305)
T d2bmfa2 144 SRDPFPQ--SNAPIMDE--------------EREIPERSWNSGH-EWV---TDFKGKTVWFVPSIKAGNDIAACLR-KNG 202 (305)
T ss_dssp CCCSSCC--CSSCEEEE--------------ECCCCCSCCSSCC-HHH---HSSCSCEEEECSCHHHHHHHHHHHH-HHT
T ss_pred ceeeecc--cCCcceEE--------------EEeccHHHHHHHH-HHH---HhhCCCEEEEeccHHHHHHHHHHHH-hCC
Confidence 3211100 00011110 0001111111111 111 2235689999999999999999998 778
Q ss_pred CeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEeccccccCCCCCccEEEE----------cC----------CCCCHhHH
Q 009500 407 MKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVII----------FD----------MPNSIKEY 466 (533)
Q Consensus 407 ~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~~~Gldi~~v~~VI~----------~~----------~p~s~~~y 466 (533)
+.+..+||++.+.. ...|++|..+++|||+++++|+|++ ++.||. ++ .|.|..+|
T Consensus 203 ~~~~~l~~~~~~~~----~~~~~~~~~~~lvaT~~~~~G~~~~-~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 277 (305)
T d2bmfa2 203 KKVIQLSRKTFDSE----YIKTRTNDWDFVVTTDISEMGANFK-AERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSA 277 (305)
T ss_dssp CCCEECCTTCHHHH----GGGGGTSCCSEEEECGGGGTTCCCC-CSEEEECCEEEEEEEECSSSCEEEEEEEEECCHHHH
T ss_pred CCEEEeCCcChHHH----HhhhhccchhhhhhhHHHHhcCCCC-ccEEEEcCCceeeeEecCCCCceEEeccccCCHHHH
Confidence 99999999986544 3467899999999999999999984 566553 33 35689999
Q ss_pred HHhhcccCCCCCccEEEEEecC
Q 009500 467 VHQIGRASQMGDEGTAIVFVNE 488 (533)
Q Consensus 467 ~qriGR~gR~g~~g~~~~l~~~ 488 (533)
+||+||+||.|+.|...+++..
T Consensus 278 ~Qr~GR~GR~~~~~~~~~~~~~ 299 (305)
T d2bmfa2 278 AQRRGRVGRNPKNENDQYIYMG 299 (305)
T ss_dssp HHHHTTSSCSSSCCCEEEEECS
T ss_pred hhhhcCcCcCCCCceEEEEECC
Confidence 9999999999988877766653
No 11
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=1.9e-30 Score=229.12 Aligned_cols=159 Identities=28% Similarity=0.504 Sum_probs=141.3
Q ss_pred ceEEEEEecchh-hHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCC
Q 009500 354 VKQLAIWVESNK-KKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGE 432 (533)
Q Consensus 354 i~~~~~~~~~~~-k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~ 432 (533)
++|.+..+...+ |...|.+++... ...++||||+++..++.+++.|. ..++.+..+||++++.+|..+++.|+.|+
T Consensus 1 I~q~~~~v~~~e~K~~~L~~ll~~~--~~~k~iIF~~s~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~r~~~l~~f~~~~ 77 (162)
T d1fuka_ 1 IKQFYVNVEEEEYKYECLTDLYDSI--SVTQAVIFCNTRRKVEELTTKLR-NDKFTVSAIYSDLPQQERDTIMKEFRSGS 77 (162)
T ss_dssp CEEEEEEEESGGGHHHHHHHHHHHT--TCSCEEEEESSHHHHHHHHHHHH-HTTCCEEEECTTSCHHHHHHHHHHHHTTS
T ss_pred CEEEEEEeCCcHHHHHHHHHHHHhC--CCCcEEEEEEEEchHHHHHHHHh-hcCceEEEeccCCchhhHHHHHHHHhhcc
Confidence 467888886555 777887887654 34689999999999999999998 78999999999999999999999999999
Q ss_pred CcEEEEeccccccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCcCHHHHHHHHHHHHhcCCCCCHHH
Q 009500 433 VPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512 (533)
Q Consensus 433 ~~VLvaT~~~~~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~~~~~l~~~l~~~~~~~p~~l 512 (533)
.+|||||++++||+|+|++++||+||+|++++.|+||+||+||.|+.|.|++|+++.+...+..+.+.++....++|.++
T Consensus 78 ~~iLv~Tdv~~rGiDi~~v~~VI~~d~P~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~~~~~~ip~~~ 157 (162)
T d1fuka_ 78 SRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELPSDI 157 (162)
T ss_dssp CSEEEEEGGGTTTCCCCSCSEEEESSCCSSGGGGGGSSCSCC-----CEEEEEEETTTHHHHHHHHHHSSCCCEECCSCC
T ss_pred cceeeccccccccccCCCceEEEEeccchhHHHHHhhccccccCCCccEEEEEcCHHHHHHHHHHHHHHcCcCCCCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred Hhc
Q 009500 513 INS 515 (533)
Q Consensus 513 ~~~ 515 (533)
.++
T Consensus 158 ~~l 160 (162)
T d1fuka_ 158 ATL 160 (162)
T ss_dssp TTT
T ss_pred HHh
Confidence 664
No 12
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=7e-30 Score=228.13 Aligned_cols=166 Identities=27% Similarity=0.449 Sum_probs=154.5
Q ss_pred CCCccceEEEEEecchhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHH
Q 009500 349 MPNKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSF 428 (533)
Q Consensus 349 ~~~~~i~~~~~~~~~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f 428 (533)
.+.+++.|.+..++...|...|.+++... ...++||||+++..++.++..|. ..|+.+..+||++++.+|..+++.|
T Consensus 2 ~tl~~i~q~yi~v~~~~K~~~L~~ll~~~--~~~k~iVF~~~~~~~~~l~~~L~-~~g~~~~~~h~~~~~~~r~~~~~~f 78 (171)
T d1s2ma2 2 LTLKGITQYYAFVEERQKLHCLNTLFSKL--QINQAIIFCNSTNRVELLAKKIT-DLGYSCYYSHARMKQQERNKVFHEF 78 (171)
T ss_dssp CBCTTEEEEEEECCGGGHHHHHHHHHHHS--CCSEEEEECSSHHHHHHHHHHHH-HHTCCEEEECTTSCHHHHHHHHHHH
T ss_pred CCccceEEEEEEcCHHHHHHHHHHHHHhC--CCCceEEEEeeeehhhHhHHhhh-cccccccccccccchhhhhhhhhhc
Confidence 35677899999999999999999999764 35689999999999999999998 7899999999999999999999999
Q ss_pred hcCCCcEEEEeccccccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCcCHHHHHHHHHHHHhcCCCC
Q 009500 429 LVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGI 508 (533)
Q Consensus 429 ~~g~~~VLvaT~~~~~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~~~~~l~~~l~~~~~~~ 508 (533)
+.|..+|||||+++++|+|+|++++||+||+|+++..|+||+||+||.|+.|.|++|+++.+...+..+.+.+.....++
T Consensus 79 ~~~~~~ilv~Td~~~~Gid~~~v~~VI~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~v~~~e~~~~~~i~~~l~~~~~~~ 158 (171)
T d1s2ma2 79 RQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAI 158 (171)
T ss_dssp HTTSSSEEEESSCSSSSCCCTTEEEEEESSCCSSHHHHHHHHCBSSCTTCCEEEEEEECGGGHHHHHHHHHHHTCCCEEC
T ss_pred ccCccccccchhHhhhccccceeEEEEecCCcchHHHHHHHhhhcccCCCccEEEEEeCHHHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988889
Q ss_pred CHHHHhchh
Q 009500 509 PRELINSRY 517 (533)
Q Consensus 509 p~~l~~~~~ 517 (533)
|..+.+..|
T Consensus 159 p~~~d~~~~ 167 (171)
T d1s2ma2 159 PATIDKSLY 167 (171)
T ss_dssp CSSCCGGGT
T ss_pred Ccccchhhh
Confidence 987666544
No 13
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=3.8e-30 Score=228.42 Aligned_cols=163 Identities=26% Similarity=0.517 Sum_probs=149.2
Q ss_pred CCCccceEEEEEecch-hhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHH
Q 009500 349 MPNKAVKQLAIWVESN-KKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRS 427 (533)
Q Consensus 349 ~~~~~i~~~~~~~~~~-~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~ 427 (533)
.+..+++|.+..++.. .|...|.+++.... ..++||||+++..++.++..|. ..++.+..+||++++.+|..+++.
T Consensus 3 ~tl~~i~q~~v~v~~~~~K~~~L~~ll~~~~--~~k~iiF~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~r~~~~~~ 79 (168)
T d2j0sa2 3 LTLEGIKQFFVAVEREEWKFDTLCDLYDTLT--ITQAVIFCNTKRKVDWLTEKMR-EANFTVSSMHGDMPQKERESIMKE 79 (168)
T ss_dssp CSCTTEEEEEEEESSTTHHHHHHHHHHHHHT--SSEEEEECSSHHHHHHHHHHHH-HTTCCCEEECTTSCHHHHHHHHHH
T ss_pred CCCCCcEEEEEEecChHHHHHHHHHHHHhCC--CCceEEEeeeHHHHHHHHHHhh-hcccchhhhhhhhhHHHHHHHHHH
Confidence 4567899999888775 48888888886643 4589999999999999999998 789999999999999999999999
Q ss_pred HhcCCCcEEEEeccccccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCcCHHHHHHHHHHHHhcCCC
Q 009500 428 FLVGEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAG 507 (533)
Q Consensus 428 f~~g~~~VLvaT~~~~~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~~~~~l~~~l~~~~~~ 507 (533)
|++|+.++||||++++||+|+|++++|||||+|++...|+||+||+||.|+.|.+++|+.+.+...++.+.+.++...++
T Consensus 80 fk~g~~~iLv~Td~~~rGiDi~~v~~VIn~d~P~~~~~yihR~GR~gR~g~~G~~i~~~~~~d~~~~~~i~~~~~~~i~e 159 (168)
T d2j0sa2 80 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 159 (168)
T ss_dssp HHHTSSCEEEECGGGSSSCCCTTEEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEEGGGHHHHHHHHHHTTCCCEE
T ss_pred HhcCCccEEeccchhcccccccCcceEEEecCCcCHHHHHhhhccccccCCCcEEEEEECHHHHHHHHHHHHHHcCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888888
Q ss_pred CCHHHHh
Q 009500 508 IPRELIN 514 (533)
Q Consensus 508 ~p~~l~~ 514 (533)
+|..+.+
T Consensus 160 ~p~~~~d 166 (168)
T d2j0sa2 160 MPMNVAD 166 (168)
T ss_dssp CCSCCTT
T ss_pred CCcChHH
Confidence 8866544
No 14
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.96 E-value=1.9e-28 Score=215.19 Aligned_cols=149 Identities=23% Similarity=0.453 Sum_probs=138.5
Q ss_pred CccceEEEEEecchhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhc
Q 009500 351 NKAVKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLV 430 (533)
Q Consensus 351 ~~~i~~~~~~~~~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~ 430 (533)
+.++.|.+..++..+|...|.+++.. .+.++||||+++..|+.++..|+ ..++.+..+||++++.+|..+++.|+.
T Consensus 1 n~nI~~~~i~v~~~~K~~~L~~ll~~---~~~k~IIF~~s~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~r~~~~~~f~~ 76 (155)
T d1hv8a2 1 NANIEQSYVEVNENERFEALCRLLKN---KEFYGLVFCKTKRDTKELASMLR-DIGFKAGAIHGDLSQSQREKVIRLFKQ 76 (155)
T ss_dssp SSSSEEEEEECCGGGHHHHHHHHHCS---TTCCEEEECSSHHHHHHHHHHHH-HTTCCEEEECSSSCHHHHHHHHHHHHT
T ss_pred CCCeEEEEEEeChHHHHHHHHHHHcc---CCCCEEEEECchHHHHHHHhhhc-ccccccccccccchhhhhhhhhhhhhc
Confidence 35789999999999999999998864 34689999999999999999998 789999999999999999999999999
Q ss_pred CCCcEEEEeccccccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCcCHHHHHHHHHHHHh
Q 009500 431 GEVPVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKS 503 (533)
Q Consensus 431 g~~~VLvaT~~~~~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~~~~~l~~~l~~ 503 (533)
|+.+|||||+++++|+|+|++++||+||+|+|+..|+||+||+||.|+.|.+++|+++.+...+..+.+.++.
T Consensus 77 ~~~~ilv~T~~~~~Gid~~~v~~Vi~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~~ 149 (155)
T d1hv8a2 77 KKIRILIATDVMSRGIDVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRREYKKLRYIERAMKL 149 (155)
T ss_dssp TSSSEEEECTTHHHHCCCSCCSEEEESSCCSCHHHHHHHSTTTCCSSSCCEEEEEECTTSHHHHHHHHHHHTC
T ss_pred ccceeeeehhHHhhhhhhccCcEEEEecCCCCHHHHHHHHHhcCcCCCCceEEEEEchHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999999999999999999888887766654
No 15
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=4.2e-28 Score=215.29 Aligned_cols=157 Identities=24% Similarity=0.416 Sum_probs=137.0
Q ss_pred CCccceEEEEEecc-hhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHH
Q 009500 350 PNKAVKQLAIWVES-NKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSF 428 (533)
Q Consensus 350 ~~~~i~~~~~~~~~-~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f 428 (533)
+..+++|.+..++. ..|...|.+++.. ...+++||||+++..++.|+..|. ..++++..+||++++.+|..+++.|
T Consensus 2 tl~~ikq~y~~~~~~~~K~~~L~~ll~~--~~~~~~lIF~~~~~~~~~l~~~l~-~~~~~~~~~hg~~~~~~R~~~~~~F 78 (168)
T d2rb4a1 2 TLNNIRQYYVLCEHRKDKYQALCNIYGS--ITIGQAIIFCQTRRNAKWLTVEMI-QDGHQVSLLSGELTVEQRASIIQRF 78 (168)
T ss_dssp CBCCEEEEEEECSSHHHHHHHHHHHHTT--SCCSEEEEECSCHHHHHHHHHHHH-TTTCCEEEECSSCCHHHHHHHHHHH
T ss_pred CccccEEEEEEeCCHHHHHHHHHHHHHh--CCCCcEEEEcCHHHHHHHHHHHHH-hcCCcceecccchhhHHHHHHhhhh
Confidence 45678999988865 4577788888754 345689999999999999999998 7899999999999999999999999
Q ss_pred hcCCCcEEEEeccccccCCCCCccEEEEcCCCC------CHhHHHHhhcccCCCCCccEEEEEecCcCHHHHHHHHHHHH
Q 009500 429 LVGEVPVIVATGILGRGVELLGVRQVIIFDMPN------SIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILK 502 (533)
Q Consensus 429 ~~g~~~VLvaT~~~~~Gldi~~v~~VI~~~~p~------s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~~~~~l~~~l~ 502 (533)
++|..++||||+++++|+|+|++++||+||+|. ++..|+||+||+||.|+.|.|++|+++.+...+..+.+.+.
T Consensus 79 ~~g~~~ilv~Td~~~~Gid~~~v~~Vi~yd~P~~~~~~~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~l~~i~~~~~ 158 (168)
T d2rb4a1 79 RDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFN 158 (168)
T ss_dssp HTTSCSEEEECCSCCTTTCCTTEEEEEESSCCC--CCSCCHHHHHHHHCBC----CCEEEEEEECGGGHHHHHHHHHHHT
T ss_pred cCCceeeeechhhhhhhhccccccEEEeecCCCcccccCCHHHHHHHhhhcccCCCceEEEEEEcHHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999998 47899999999999999999999999999998888888777
Q ss_pred hcCCCCC
Q 009500 503 SSGAGIP 509 (533)
Q Consensus 503 ~~~~~~p 509 (533)
....++|
T Consensus 159 ~~i~el~ 165 (168)
T d2rb4a1 159 SSIKQLN 165 (168)
T ss_dssp CCCEEEC
T ss_pred CCCCcCC
Confidence 7665555
No 16
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=3e-28 Score=216.36 Aligned_cols=159 Identities=28% Similarity=0.477 Sum_probs=142.7
Q ss_pred ceEEEEEecchhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCC
Q 009500 354 VKQLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEV 433 (533)
Q Consensus 354 i~~~~~~~~~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~ 433 (533)
+.|++..+..+.|...|.+++.... ..++||||+++..++.+++.|. ..++.+..+||+|++++|..+++.|++|++
T Consensus 2 l~q~~v~~~~~~K~~~L~~ll~~~~--~~k~iIF~~~~~~~~~l~~~L~-~~~~~~~~ihg~~~~~~r~~~l~~F~~g~~ 78 (168)
T d1t5ia_ 2 LQQYYVKLKDNEKNRKLFDLLDVLE--FNQVVIFVKSVQRCIALAQLLV-EQNFPAIAIHRGMPQEERLSRYQQFKDFQR 78 (168)
T ss_dssp CEEEEEECCGGGHHHHHHHHHHHSC--CSSEEEECSSHHHHHHHHHHHH-HTTCCEEEECTTSCHHHHHHHHHHHHTTSC
T ss_pred cEEEEEEeChHHHHHHHHHHHHhCC--CCeEEEEEeeeecchhhhhhhc-cccccccccccccchhhhhhhhhhhccccc
Confidence 5789999999999999999997753 4689999999999999999998 789999999999999999999999999999
Q ss_pred cEEEEeccccccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCc-CHHHHHHHHHHHHhcCCCCCHHH
Q 009500 434 PVIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEE-NKNLFQELVDILKSSGAGIPREL 512 (533)
Q Consensus 434 ~VLvaT~~~~~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~-~~~~~~~l~~~l~~~~~~~p~~l 512 (533)
+|||||+++++|+|+|.+++||+||+|.++..|+||+||+||.|+.|.|++|+++. +...+..+.+.++....++|.++
T Consensus 79 ~iLv~T~~~~~Gid~~~~~~vi~~~~p~~~~~yiqr~GR~gR~g~~g~~i~l~~~~~~~~~~~~i~~~~~~~~~elp~~~ 158 (168)
T d1t5ia_ 79 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 158 (168)
T ss_dssp SEEEESSCCSTTCCGGGCSEEEESSCCSSHHHHHHHHHHHTGGGCCCEEEEEECSHHHHHHHHHHHHHHCCCEEECC---
T ss_pred eeeeccccccchhhcccchhhhhhhcccchhhHhhhhhhcccCCCccEEEEEECchHHHHHHHHHHHHHcCCcccCCchh
Confidence 99999999999999999999999999999999999999999999999999999875 56778888888888888899876
Q ss_pred Hhc
Q 009500 513 INS 515 (533)
Q Consensus 513 ~~~ 515 (533)
.-.
T Consensus 159 ~i~ 161 (168)
T d1t5ia_ 159 DIS 161 (168)
T ss_dssp ---
T ss_pred hHH
Confidence 433
No 17
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=6.7e-27 Score=212.91 Aligned_cols=136 Identities=22% Similarity=0.408 Sum_probs=124.9
Q ss_pred EecchhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEe
Q 009500 360 WVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVAT 439 (533)
Q Consensus 360 ~~~~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT 439 (533)
.++...|...|+.++.... +.++||||+++..++.++..|. ..++.+..+||++++.+|..+++.|++|+++|||||
T Consensus 11 v~~~~~k~~~L~~~l~~~~--~~~~IIF~~t~~~~~~l~~~l~-~~~~~~~~~h~~~~~~~r~~~~~~f~~g~~~ilvaT 87 (200)
T d1oywa3 11 LMEKFKPLDQLMRYVQEQR--GKSGIIYCNSRAKVEDTAARLQ-SKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVAT 87 (200)
T ss_dssp EEECSSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHHH-HTTCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEC
T ss_pred EEcCCcHHHHHHHHHHhcC--CCCEEEEEeeehhhHHhhhhhc-cCCceeEEecCCCcHHHHHHHHHHHhcccceEEEec
Confidence 3555678888888887643 4689999999999999999998 789999999999999999999999999999999999
Q ss_pred ccccccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCcCHHHHHHHH
Q 009500 440 GILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELV 498 (533)
Q Consensus 440 ~~~~~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~~~~~l~ 498 (533)
+++++|||+|++++||+||+|.++.+|+||+||+||.|+.|.|++|+++.+...++.++
T Consensus 88 d~~~~GiD~p~v~~VI~~~~P~~~~~y~qr~GR~gR~g~~g~ai~~~~~~d~~~l~~~i 146 (200)
T d1oywa3 88 VAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL 146 (200)
T ss_dssp TTSCTTTCCTTCCEEEESSCCSSHHHHHHHHTTSCTTSSCEEEEEEECHHHHHHHHHHH
T ss_pred chhhhccCCCCCCEEEECCCccchHHHHHHhhhhhcCCCCceEEEecCHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999998877776554
No 18
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.94 E-value=2.3e-27 Score=218.31 Aligned_cols=182 Identities=18% Similarity=0.225 Sum_probs=142.2
Q ss_pred CCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHH
Q 009500 142 LSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRE 221 (533)
Q Consensus 142 l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~ 221 (533)
+++.+...|++.||.+|+|+|.++++.+++|+++++++|||||||++++++++..+.. ++++||++|+++
T Consensus 10 ~~~~~~~~l~~~g~~~l~~~Q~~ai~~l~~~~~~il~apTGsGKT~~a~l~i~~~~~~----------~~~vl~l~P~~~ 79 (202)
T d2p6ra3 10 ISSYAVGILKEEGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIK----------GGKSLYVVPLRA 79 (202)
T ss_dssp HHHHHHHHHHCC---CCCCCCHHHHHHHTTCSCEEEECSSHHHHHHHHHHHHHHHHHT----------TCCEEEEESSHH
T ss_pred hhHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCchhHHHHHHHHHHhhc----------cCcceeecccHH
Confidence 5678888999999999999999999999999999999999999999999998876643 457999999999
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcch
Q 009500 222 LCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGF 301 (533)
Q Consensus 222 L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~ 301 (533)
|+.|+.+.++++.... .++....|+..... .....+.++++||..+..++.+....+..+++||+||+|.+.+..+
T Consensus 80 L~~q~~~~~~~~~~~~-~~v~~~~~~~~~~~---~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ii~DE~h~~~~~~r 155 (202)
T d2p6ra3 80 LAGEKYESFKKWEKIG-LRIGISTGDYESRD---EHLGDCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHLLDSEKR 155 (202)
T ss_dssp HHHHHHHHHTTTTTTT-CCEEEECSSCBCCS---SCSTTCSEEEEEHHHHHHHHHTTCSGGGGCCEEEETTGGGGGCTTT
T ss_pred HHHHHHHHHHHHhhcc-ccceeeccCccccc---ccccccceeeeccHHHHHHHhccchhhhhhhhccccHHHHhccccc
Confidence 9999999998876542 44444444433222 1124588999999999999988887888999999999999987765
Q ss_pred HHHHHHHHHhC----CCCcEEEecccCcHHHHHHHHhhcCC
Q 009500 302 RDQVMQIFRAI----SLPQILMYSATISQEVEKMSSSISKD 338 (533)
Q Consensus 302 ~~~i~~i~~~~----~~~q~i~~SAT~~~~~~~~~~~~~~~ 338 (533)
...+..++..+ ++.|+|+||||+++ .+.++..+..+
T Consensus 156 ~~~~~~~l~~i~~~~~~~~~l~lSATl~n-~~~~~~~l~~~ 195 (202)
T d2p6ra3 156 GATLEILVTKMRRMNKALRVIGLSATAPN-VTEIAEWLDAD 195 (202)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEECCCTT-HHHHHHHTTCE
T ss_pred chHHHHHHHHHHhcCCCCcEEEEcCCCCc-HHHHHHHcCCC
Confidence 55555544443 67899999999976 46666554333
No 19
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=2.5e-27 Score=218.85 Aligned_cols=188 Identities=20% Similarity=0.252 Sum_probs=144.1
Q ss_pred CcccCCCCHHHHHHHHHc-CCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEE
Q 009500 136 SFSSCSLSQKLLQNIEAA-GYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAM 214 (533)
Q Consensus 136 ~f~~~~l~~~l~~~l~~~-g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~L 214 (533)
..+.++|++...+.|++. ||..++|+|.++++++++|+|+++++|||||||++|.+|++. ...+++
T Consensus 3 ~~e~~~l~~~~~~~l~~~fg~~~~rp~Q~~ai~~~l~g~~vlv~apTGsGKT~~~~~~~~~-------------~~~~~~ 69 (206)
T d1oywa2 3 QAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALL-------------LNGLTV 69 (206)
T ss_dssp CCCCSSHHHHHHHHHHHTTCCSSCCTTHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHH-------------SSSEEE
T ss_pred chhhCCCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCCCcchhhhhhhh-------------ccCceE
Confidence 456788999999999987 999999999999999999999999999999999999999874 245799
Q ss_pred EEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchH----HHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEE
Q 009500 215 VLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMA----RQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVL 290 (533)
Q Consensus 215 il~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~----~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVv 290 (533)
+++|+++|+.|+...++.+... .....+..... ...........|+++||.++............+++++|+
T Consensus 70 ~v~P~~~L~~q~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~~v~~lvi 145 (206)
T d1oywa2 70 VVSPLISLMKDQVDQLQANGVA----AACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAV 145 (206)
T ss_dssp EECSCHHHHHHHHHHHHHTTCC----EEEECTTSCHHHHHHHHHHHHHTCCSEEEECHHHHTSTTHHHHHTTSCEEEEEE
T ss_pred EeccchhhhhhHHHHHHhhccc----ccccccccccccchhHHHHHhcCCceEEEEechhhhchhhcccchhheeeeeee
Confidence 9999999999999988877432 33333322221 112223345889999999986554444445678999999
Q ss_pred eccchhhhcchH-----HHHHHHHHhCCCCcEEEecccCcHHHH-HHHHhh-cCCeE
Q 009500 291 DEVDCMLQRGFR-----DQVMQIFRAISLPQILMYSATISQEVE-KMSSSI-SKDIV 340 (533)
Q Consensus 291 DEah~~~~~~~~-----~~i~~i~~~~~~~q~i~~SAT~~~~~~-~~~~~~-~~~~~ 340 (533)
||||++.++++. ..+..+...++..|+++||||+++.+. .+.+.+ +.+|+
T Consensus 146 DEaH~~~~~~~~~~~~~~~~~~l~~~~~~~~ii~lSATl~~~v~~di~~~L~l~~p~ 202 (206)
T d1oywa2 146 DEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPL 202 (206)
T ss_dssp SSGGGGCTTSSCCCHHHHGGGGHHHHCTTSCEEEEESCCCHHHHHHHHHHHTCCSCE
T ss_pred eeeeeeeccccchHHHHHHHHHHHHhCCCCceEEEEeCCCHHHHHHHHHHcCCCCCc
Confidence 999999877521 233455666788999999999999875 455554 56764
No 20
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=99.93 E-value=5.1e-25 Score=193.06 Aligned_cols=128 Identities=20% Similarity=0.318 Sum_probs=111.8
Q ss_pred hHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEecccccc
Q 009500 366 KKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRG 445 (533)
Q Consensus 366 k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~~~G 445 (533)
....|++.+.+....+.++||||+++++|+.++..|. ..|+.+..+||+|++.+|..+++.|++|+++|||||+++++|
T Consensus 16 qv~dll~~i~~~~~~g~r~lvfc~t~~~~~~l~~~L~-~~Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~v~~~G 94 (174)
T d1c4oa2 16 QILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLV-EHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREG 94 (174)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHH-HTTCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESCCCCTT
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcchhHHHHHHHHHH-hcCCceEEEecccchHHHHHHHHHHHCCCeEEEEeeeeeeee
Confidence 3455666666555567899999999999999999999 899999999999999999999999999999999999999999
Q ss_pred CCCCCccEEEEcCCCC-----CHhHHHHhhcccCCCCCccEEEEEecCcCHHHHH
Q 009500 446 VELLGVRQVIIFDMPN-----SIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495 (533)
Q Consensus 446 ldi~~v~~VI~~~~p~-----s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~~~~ 495 (533)
+|+|++++||+|++|. |...|+||+||+||.|. |.++++.......+.+
T Consensus 95 iDip~V~~Vi~~~~~~~~~~~~~~~~iq~~GR~gR~~~-g~~~~~~~~~~~~~~~ 148 (174)
T d1c4oa2 95 LDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAR-GEVWLYADRVSEAMQR 148 (174)
T ss_dssp CCCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSCCHHHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHhhhhhhcCC-CeeEEeecCCCHHHHH
Confidence 9999999999999765 55889999999999864 8888887766554333
No 21
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.92 E-value=2.7e-25 Score=209.65 Aligned_cols=165 Identities=20% Similarity=0.200 Sum_probs=123.8
Q ss_pred HHHHHcCCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHH
Q 009500 148 QNIEAAGYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVE 227 (533)
Q Consensus 148 ~~l~~~g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~ 227 (533)
.++-..++.+|+++|+++++.++.|+|++++||||+|||++++++++..+. .++++||++||++|+.|+.
T Consensus 34 ~~~~~~~~~~p~~~Q~~~i~~~l~g~~~~i~apTGsGKT~~~~~~~~~~~~----------~~~rvliv~Pt~~La~Q~~ 103 (237)
T d1gkub1 34 VEFFRKCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLAL----------KGKRCYVIFPTSLLVIQAA 103 (237)
T ss_dssp HHHHHTTTCSCCHHHHHHHHHHHTTCCEECCCCBTSCSHHHHHHHHHHHHT----------TSCCEEEEESCHHHHHHHH
T ss_pred HHHHHhccCCCCHHHHHHHHHHHCCCCEEEEecCCChHHHHHHHHHHHHHH----------hcCeEEEEeccHHHHHHHH
Confidence 344455788999999999999999999999999999999999998876543 3568999999999999999
Q ss_pred HHHHHHhcCCCCeE----EEEEcCCchHHHHHHH--HcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcch
Q 009500 228 EQAKLLGKGLPFKT----ALVVGGDAMARQVYRI--QQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGF 301 (533)
Q Consensus 228 ~~~~~~~~~~~~~~----~~~~gg~~~~~~~~~l--~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~ 301 (533)
++++++.+..++.+ ....++.....+...+ ..+++|+|+||++|.+ +...+.++++||+||+|.|++.+.
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ilv~Tp~~l~~----~~~~~~~~~~vVvDE~d~~l~~~~ 179 (237)
T d1gkub1 104 ETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSK----HYRELGHFDFIFVDDVDAILKASK 179 (237)
T ss_dssp HHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHH----CSTTSCCCSEEEESCHHHHHTSTH
T ss_pred HHHHHHHHHcCCceEEEEeeeecccchhhhhhhhccccccceeccChHHHHH----hhhhcCCCCEEEEEChhhhhhccc
Confidence 99999988766443 3333333333332222 2457899999998754 333577899999999999987653
Q ss_pred HHHHHHHHHhC--------------CCCcEEEecccCcHHH
Q 009500 302 RDQVMQIFRAI--------------SLPQILMYSATISQEV 328 (533)
Q Consensus 302 ~~~i~~i~~~~--------------~~~q~i~~SAT~~~~~ 328 (533)
. +..++..+ ...|++++|||+++..
T Consensus 180 ~--~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~SAT~~~~~ 218 (237)
T d1gkub1 180 N--VDKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGK 218 (237)
T ss_dssp H--HHHHHHHTTEEEETTTTEEEECCSSEEEECCCCSCCCT
T ss_pred c--hhHHHHhcCChHHHHHHHhhCCCCCeEEEEeCCCCccc
Confidence 2 22222221 4567999999998654
No 22
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=99.92 E-value=1.6e-24 Score=193.16 Aligned_cols=127 Identities=24% Similarity=0.382 Sum_probs=109.3
Q ss_pred hhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEecccc
Q 009500 364 NKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILG 443 (533)
Q Consensus 364 ~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~~ 443 (533)
......++..+.+....+.++||||+++..++.++..|. ..|+.+..+||+|++.+|..+++.|++|+++|||||++++
T Consensus 14 ~~qvd~ll~~i~~~~~~~~~~iif~~~~~~~~~~~~~l~-~~g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTdv~~ 92 (181)
T d1t5la2 14 KGQIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLK-EAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLR 92 (181)
T ss_dssp TTHHHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHH-TTTCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEESCCCS
T ss_pred CCcHHHHHHHHHHHHhcCCeEEEEeehhhhhHHHHHHHH-hCCcceeEecCCccHHHHHHHHHHHHCCCCCEEEehhHHH
Confidence 344455666665554556789999999999999999998 8899999999999999999999999999999999999999
Q ss_pred ccCCCCCccEEEEcCCCC-----CHhHHHHhhcccCCCCCccEEEEEecCcCHH
Q 009500 444 RGVELLGVRQVIIFDMPN-----SIKEYVHQIGRASQMGDEGTAIVFVNEENKN 492 (533)
Q Consensus 444 ~Gldi~~v~~VI~~~~p~-----s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~ 492 (533)
+|||+|++++|||||+|. |...|+||+||+||.|. |.++++.......
T Consensus 93 rGiDip~v~~VI~~d~p~~~~~~s~~~yi~R~GRagR~g~-~~~~~~~~~~~~~ 145 (181)
T d1t5la2 93 EGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAN-GHVIMYADTITKS 145 (181)
T ss_dssp SSCCCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSCCHH
T ss_pred ccCCCCCCCEEEEecCCcccccccHHHHHHHHHhhccccC-ceeEeecchhhHH
Confidence 999999999999999995 78999999999999975 4555555554443
No 23
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.91 E-value=3.8e-23 Score=189.48 Aligned_cols=164 Identities=20% Similarity=0.190 Sum_probs=130.4
Q ss_pred CCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHh
Q 009500 155 YDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLG 234 (533)
Q Consensus 155 ~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~ 234 (533)
+-+|+++|.+++..+. ++|+|+++|||||||+++++++...+.. .+.++||++|+++|+.|+.+.++++.
T Consensus 7 ~~~pr~~Q~~~~~~~~-~~n~lv~~pTGsGKT~i~~~~~~~~~~~---------~~~~il~i~P~~~L~~q~~~~~~~~~ 76 (200)
T d1wp9a1 7 LIQPRIYQEVIYAKCK-ETNCLIVLPTGLGKTLIAMMIAEYRLTK---------YGGKVLMLAPTKPLVLQHAESFRRLF 76 (200)
T ss_dssp HHCCCHHHHHHHHHGG-GSCEEEECCTTSCHHHHHHHHHHHHHHH---------SCSCEEEECSSHHHHHHHHHHHHHHB
T ss_pred CCCCCHHHHHHHHHHh-cCCeEEEeCCCCcHHHHHHHHHHHHHHh---------cCCcEEEEcCchHHHHHHHHHHHHhh
Confidence 3489999999999876 5689999999999999988887766543 34579999999999999999999998
Q ss_pred cCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchH-HHHHHHHHhCC
Q 009500 235 KGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFR-DQVMQIFRAIS 313 (533)
Q Consensus 235 ~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~-~~i~~i~~~~~ 313 (533)
...+.++....++...... .......+++++||+.+...+......+.++++||+||||++...... .....+.....
T Consensus 77 ~~~~~~v~~~~~~~~~~~~-~~~~~~~~i~i~t~~~~~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~ 155 (200)
T d1wp9a1 77 NLPPEKIVALTGEKSPEER-SKAWARAKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAK 155 (200)
T ss_dssp CSCGGGEEEECSCSCHHHH-HHHHHHCSEEEECHHHHHHHHHTTSCCTTSCSEEEEETGGGCSTTCHHHHHHHHHHHHCS
T ss_pred cccccceeeeecccchhHH-HHhhhcccccccccchhHHHHhhhhhhccccceEEEEehhhhhcchhHHHHHHHHHhcCC
Confidence 8777787776666555443 333445789999999999999988888899999999999998765433 33334445557
Q ss_pred CCcEEEecccCcHHHH
Q 009500 314 LPQILMYSATISQEVE 329 (533)
Q Consensus 314 ~~q~i~~SAT~~~~~~ 329 (533)
.++++++|||++....
T Consensus 156 ~~~~l~~SATp~~~~~ 171 (200)
T d1wp9a1 156 NPLVIGLTASPGSTPE 171 (200)
T ss_dssp SCCEEEEESCSCSSHH
T ss_pred CCcEEEEEecCCCcHH
Confidence 7899999999864433
No 24
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.85 E-value=5.2e-22 Score=168.56 Aligned_cols=99 Identities=20% Similarity=0.253 Sum_probs=90.3
Q ss_pred CCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEeccccccCCCCCccEEEEcC--
Q 009500 381 TPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFD-- 458 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~~~Gldi~~v~~VI~~~-- 458 (533)
++++||||+|+..|+.|++.|+ ..|+.+..+|++++++ .|++|+.+|||||+++++|+| |++++||+++
T Consensus 35 ~~k~IVFc~t~~~ae~la~~L~-~~G~~~~~~H~~~~~~-------~~~~~~~~vlvaTd~~~~GiD-~~v~~Vi~~~~~ 105 (138)
T d1jr6a_ 35 GGRHLIFCHSKKKCDELAAKLV-ALGINAVAYYRGLDVS-------VIPTNGDVVVVATDALMTGFT-GDFDSVIDCNTS 105 (138)
T ss_dssp TSCEEEECSCHHHHHHHHHHHH-HHTCEEEEECTTCCSC-------CCTTSSCEEEEESSSSCSSSC-CCBSEEEECSEE
T ss_pred CCCEEEEeCcHHHHHHHHHHHh-ccccchhhhhccchhh-------hhhhhhcceeehhHHHHhccc-cccceEEEEEec
Confidence 5689999999999999999998 7899999999999854 478899999999999999999 9999999855
Q ss_pred --CCCCHhHHHHhhcccCCCCCccEEEEEecCcC
Q 009500 459 --MPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN 490 (533)
Q Consensus 459 --~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~~ 490 (533)
+|.+++.|+||+||+|| |++|. ++|+.+.+
T Consensus 106 ~~~P~~~~~y~qr~GR~gR-g~~G~-~~~i~~~e 137 (138)
T d1jr6a_ 106 DGKPQDAVSRTQRRGRTGR-GKPGI-YRFVAPGE 137 (138)
T ss_dssp TTEECCHHHHHHHHTTBCS-SSCEE-EEECCSSC
T ss_pred CCCCCCHHHHHhHhccccC-CCCcE-EEEEcCCC
Confidence 69999999999999999 99995 77887765
No 25
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.82 E-value=1.5e-20 Score=171.01 Aligned_cols=114 Identities=27% Similarity=0.383 Sum_probs=98.9
Q ss_pred CCCCEEEEEcCcccHHHHHHHHHhhc-----------------------------CCeEEEEcCCCCHHHHHHHHHHHhc
Q 009500 380 FTPPAVVYVGSRLGADLLSNAISVTT-----------------------------GMKALSIHGEKPMKERREIMRSFLV 430 (533)
Q Consensus 380 ~~~~~lIF~~s~~~~~~l~~~l~~~~-----------------------------~~~~~~ih~~~~~~~r~~~~~~f~~ 430 (533)
.++++||||+|++.|+.++..|.... ...+..+||+|++.+|..+++.|++
T Consensus 39 ~~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~ 118 (201)
T d2p6ra4 39 ENGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRR 118 (201)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHT
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhC
Confidence 46789999999999998888875211 1226789999999999999999999
Q ss_pred CCCcEEEEeccccccCCCCCccEEEE-------cCCCCCHhHHHHhhcccCCCCC--ccEEEEEecCcCHHH
Q 009500 431 GEVPVIVATGILGRGVELLGVRQVII-------FDMPNSIKEYVHQIGRASQMGD--EGTAIVFVNEENKNL 493 (533)
Q Consensus 431 g~~~VLvaT~~~~~Gldi~~v~~VI~-------~~~p~s~~~y~qriGR~gR~g~--~g~~~~l~~~~~~~~ 493 (533)
|.++|||||+++++|+|+|..++||. ++.|.+..+|+||+|||||.|. .|.+++++.+.+.+.
T Consensus 119 g~i~vlvaT~~l~~Gin~p~~~vvi~~~~~~d~~~~~~~~~~~~q~~GRAGR~g~~~~G~~~l~~~~~~~~~ 190 (201)
T d2p6ra4 119 GNIKVVVATPTLAAGVNLPARRVIVRSLYRFDGYSKRIKVSEYKQMAGRAGRPGMDERGEAIIIVGKRDREI 190 (201)
T ss_dssp TSCCEEEECSTTTSSSCCCBSEEEECCSEEESSSEEECCHHHHHHHHTTBSCTTTCSCEEEEEECCGGGHHH
T ss_pred CCceEEEechHHHhhcCCCCceEEEecceeccCCcCCCCHHHHHHHhcccCCCCCCCeeEEEEEeCCCChHH
Confidence 99999999999999999999888886 6678899999999999999985 699999988876653
No 26
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.81 E-value=2.8e-20 Score=179.91 Aligned_cols=125 Identities=23% Similarity=0.378 Sum_probs=106.7
Q ss_pred hhHHHHHHHHHhc--cCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcC--------CCCHHHHHHHHHHHhcCCCc
Q 009500 365 KKKQKLFDILMSK--QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHG--------EKPMKERREIMRSFLVGEVP 434 (533)
Q Consensus 365 ~k~~~l~~~l~~~--~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~--------~~~~~~r~~~~~~f~~g~~~ 434 (533)
.|...+.+++... ...+.++||||+++..++.+++.|. ..++++..+|| ++++.+|..+++.|++|+++
T Consensus 143 pK~~~l~~~l~~~~~~~~~~k~iiF~~~~~~~~~~~~~L~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~~~ 221 (286)
T d1wp9a2 143 PKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVNELV-KDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFN 221 (286)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEECSCHHHHHHHHHHHH-HTTCCEEEECCSSCC-------CCHHHHHHHHHHHTSCS
T ss_pred cHHHHHHHHHHHHHHhCCCCcEEEEeCcHHhHHHHHHHHH-HcCCceEEeeccccccccchhchHHHHHHHHHHHcCCCc
Confidence 4666666666543 2446799999999999999999998 77888887766 56667899999999999999
Q ss_pred EEEEeccccccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCcCH
Q 009500 435 VIVATGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENK 491 (533)
Q Consensus 435 VLvaT~~~~~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~~~ 491 (533)
|||||+++++|||+|++++||+||+|+++..|+||+||+||. +.|.+++|+++...
T Consensus 222 vLv~T~~~~~Gld~~~~~~Vi~~d~~~~~~~~~Qr~GR~gR~-~~~~~~~l~~~~~~ 277 (286)
T d1wp9a2 222 VLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRH-MPGRVIILMAKGTR 277 (286)
T ss_dssp EEEECGGGGGGGGSTTCCEEEESSCCHHHHHHHHHHTTSCSC-CCSEEEEEEETTSH
T ss_pred EEEEccceeccccCCCCCEEEEeCCCCCHHHHHHHHHhCCCC-CCCEEEEEEeCCCH
Confidence 999999999999999999999999999999999999999997 57889999987643
No 27
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.79 E-value=9e-18 Score=154.25 Aligned_cols=175 Identities=21% Similarity=0.213 Sum_probs=134.9
Q ss_pred CCCHHHHHHHHHcCCCCCCHHHHHHHHHHh----CC--CcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEE
Q 009500 141 SLSQKLLQNIEAAGYDMPTPVQMQAIPSAL----SG--KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAM 214 (533)
Q Consensus 141 ~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~----~g--~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~L 214 (533)
..+....+.+.+.-.-.+|+-|.+++..+. ++ .+.|++|.||||||.+|+..+...+. .+.+++
T Consensus 39 ~~~~~~~~~~~~~lP~~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~----------~g~qv~ 108 (233)
T d2eyqa3 39 KHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVD----------NHKQVA 108 (233)
T ss_dssp CCCHHHHHHHHHTCCSCCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHT----------TTCEEE
T ss_pred CCCHHHHHhhhhccccccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHH----------cCCceE
Confidence 345666666666544589999999998876 33 36899999999999999988887663 478899
Q ss_pred EEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHH---HHHHHcC-CceeecChHHHHHHHHcCCCCCCCeeEEEE
Q 009500 215 VLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ---VYRIQQG-VELIVGTPGRLIDLLMKHDIELDDIRMFVL 290 (533)
Q Consensus 215 il~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~---~~~l~~~-~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVv 290 (533)
+++||..|+.|.++.++++...++.++..+.++...... +..+..| .+|+|+|-.. ....+.++++++||+
T Consensus 109 ~l~Pt~~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~-----l~~~~~f~~LgLiIi 183 (233)
T d2eyqa3 109 VLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKL-----LQSDVKFKDLGLLIV 183 (233)
T ss_dssp EECSSHHHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHH-----HHSCCCCSSEEEEEE
T ss_pred EEccHHHhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhh-----hccCCccccccceee
Confidence 999999999999999999999899999999998776553 3344444 7999999433 345667899999999
Q ss_pred eccchhhhcchHHHHHHHHHhCCCCcEEEecccCcHHHHHHHHh
Q 009500 291 DEVDCMLQRGFRDQVMQIFRAISLPQILMYSATISQEVEKMSSS 334 (533)
Q Consensus 291 DEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT~~~~~~~~~~~ 334 (533)
||-|+..- .+-..+.....+..++++|||+.+....++..
T Consensus 184 DEeH~fg~----kQ~~~l~~~~~~~~~l~~SATPiprtl~~~~~ 223 (233)
T d2eyqa3 184 DEEHRFGV----RHKERIKAMRANVDILTLTATPIPRTLNMAMS 223 (233)
T ss_dssp ESGGGSCH----HHHHHHHHHHTTSEEEEEESSCCCHHHHHHHT
T ss_pred echhhhhh----HHHHHHHhhCCCCCEEEEecchhHHHHHHHHH
Confidence 99998642 23344445557789999999997655554443
No 28
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.78 E-value=3.9e-20 Score=167.09 Aligned_cols=155 Identities=14% Similarity=0.215 Sum_probs=119.9
Q ss_pred hhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHH--------HHHHHhh--cCCeEEEEcCCCCHHHHHHHHHHHhcCCC
Q 009500 364 NKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLL--------SNAISVT--TGMKALSIHGEKPMKERREIMRSFLVGEV 433 (533)
Q Consensus 364 ~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l--------~~~l~~~--~~~~~~~ih~~~~~~~r~~~~~~f~~g~~ 433 (533)
.++...+.+.+.+....++++.+.||..+..+.+ ...|.+. .++.+..+||.|++++|+.+++.|++|++
T Consensus 12 ~~~~~~v~~~I~~el~~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~ 91 (206)
T d1gm5a4 12 MDRVNEVYEFVRQEVMRGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRY 91 (206)
T ss_dssp SSTHHHHHHHHHHHTTTSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSS
T ss_pred cccHHHHHHHHHHHHHcCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCE
Confidence 3456778888888778888999999887655533 2333322 25677889999999999999999999999
Q ss_pred cEEEEeccccccCCCCCccEEEEcCCCC-CHhHHHHhhcccCCCCCccEEEEEecCcCHHHHHHHHHHHHhcCCCCCHHH
Q 009500 434 PVIVATGILGRGVELLGVRQVIIFDMPN-SIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQELVDILKSSGAGIPREL 512 (533)
Q Consensus 434 ~VLvaT~~~~~Gldi~~v~~VI~~~~p~-s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~~~~~l~~~l~~~~~~~p~~l 512 (533)
+|||||+++++|||+|++++||+++.|. ..+++.|..||+||.|..|.|++++++.+...... ++.+...+..+.-.-
T Consensus 92 ~iLVaTtViE~GIDip~a~~iii~~a~~fglsqlhQlrGRvGR~~~~~~~~l~~~~~~~~~~~r-l~~~~~~~dGf~ia~ 170 (206)
T d1gm5a4 92 DILVSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDVGEEAMER-LRFFTLNTDGFKIAE 170 (206)
T ss_dssp SBCCCSSCCCSCSCCTTCCEEEBCSCSSSCTTHHHHHHHTSCCSSTTCEEECCCCSCCHHHHHH-HHHHHTCCCSHHHHH
T ss_pred EEEEEehhhhccccccCCcEEEEEccCCccHHHHHhhhhheeeccccceeEeeeccccccchhh-hhhccccCCCchHHH
Confidence 9999999999999999999999999997 67777777999999999999999998866555544 577777777766666
Q ss_pred Hhchhcc
Q 009500 513 INSRYTV 519 (533)
Q Consensus 513 ~~~~~~~ 519 (533)
.++...-
T Consensus 171 ~Dl~lRG 177 (206)
T d1gm5a4 171 YDLKTRG 177 (206)
T ss_dssp HHHHSSC
T ss_pred HHHhccC
Confidence 6665443
No 29
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.76 E-value=4.2e-18 Score=159.47 Aligned_cols=177 Identities=18% Similarity=0.239 Sum_probs=128.6
Q ss_pred HHHHH-HHHcCCCCCCHHHHHHHHHHh----CC--CcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEc
Q 009500 145 KLLQN-IEAAGYDMPTPVQMQAIPSAL----SG--KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLT 217 (533)
Q Consensus 145 ~l~~~-l~~~g~~~p~~~Q~~~i~~i~----~g--~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~ 217 (533)
.+.+. +....| .+|+-|.+++..+. ++ .+.|++|.||||||.+|+..++..+.. +.++++++
T Consensus 71 ~l~~~f~~~LPF-eLT~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~----------g~q~~~m~ 139 (264)
T d1gm5a3 71 KLAEEFIKSLPF-KLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEA----------GFQTAFMV 139 (264)
T ss_dssp HHHHHHHHHSSS-CCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHH----------TSCEEEEC
T ss_pred HHHHHHHhhccc-cCCchHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHHhc----------ccceeEEe
Confidence 34444 444566 89999999999986 23 367999999999999999998877654 66799999
Q ss_pred ccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHH---HHHHHc-CCceeecChHHHHHHHHcCCCCCCCeeEEEEecc
Q 009500 218 PTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ---VYRIQQ-GVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEV 293 (533)
Q Consensus 218 Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~---~~~l~~-~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEa 293 (533)
||..|+.|.+..++++...+++.+..+.|+....+. +..+.+ ..+|+|+|-.-+ ...+.++++++||+||-
T Consensus 140 Pt~~La~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~-----~~~~~f~~LglviiDEq 214 (264)
T d1gm5a3 140 PTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALI-----QEDVHFKNLGLVIIDEQ 214 (264)
T ss_dssp SCHHHHHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHH-----HHCCCCSCCCEEEEESC
T ss_pred ehHhhhHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHh-----cCCCCccccceeeeccc
Confidence 999999999999999999989999999988776543 333444 489999995433 34456789999999999
Q ss_pred chhhhcchHHHHHHHHHhCCCCcEEEecccCcHHHHHHHHhhcCCeEE
Q 009500 294 DCMLQRGFRDQVMQIFRAISLPQILMYSATISQEVEKMSSSISKDIVV 341 (533)
Q Consensus 294 h~~~~~~~~~~i~~i~~~~~~~q~i~~SAT~~~~~~~~~~~~~~~~~~ 341 (533)
|++.-... ..+..+-..+.++++|||+-+....++.....+...
T Consensus 215 H~fgv~Qr----~~l~~~~~~~~~l~~SATPiprtl~~~~~g~~~~s~ 258 (264)
T d1gm5a3 215 HRFGVKQR----EALMNKGKMVDTLVMSATPIPRSMALAFYGDLDVTV 258 (264)
T ss_dssp CCC---------CCCCSSSSCCCEEEEESSCCCHHHHHHHTCCSSCEE
T ss_pred cccchhhH----HHHHHhCcCCCEEEEECCCCHHHHHHHHcCCCCeEe
Confidence 98753221 111222256789999999866555555443334433
No 30
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=99.76 E-value=9.3e-19 Score=167.80 Aligned_cols=152 Identities=13% Similarity=0.114 Sum_probs=113.2
Q ss_pred CCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhc
Q 009500 156 DMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235 (533)
Q Consensus 156 ~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~ 235 (533)
-.|+++|.+++..++.+++.++.+|||+|||+++.+.+ ..+.. ..+.++||++|+++|+.|+.+.+.+++.
T Consensus 112 ~~~rdyQ~~av~~~l~~~~~il~~pTGsGKT~i~~~i~-~~~~~--------~~~~k~Liivp~~~Lv~Q~~~~f~~~~~ 182 (282)
T d1rifa_ 112 IEPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLA-RYYLE--------NYEGKILIIVPTTALTTQMADDFVDYRL 182 (282)
T ss_dssp CCCCHHHHHHHHHHHHHSEEEECCCTTSCHHHHHHHHH-HHHHH--------HCSSEEEEECSSHHHHHHHHHHHHHHTS
T ss_pred cccchHHHHHHHHHHhcCCceeEEEcccCccHHHHHHH-HHhhh--------cccceEEEEEcCchhHHHHHHHHHHhhc
Confidence 37999999999999999999999999999998765443 33332 2345799999999999999999999876
Q ss_pred CCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchHHHHHHHHHhCCCC
Q 009500 236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315 (533)
Q Consensus 236 ~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~~~~ 315 (533)
.....+..+.+|...... ......++++|++.+... ....++++++||+||||++. ...+..++..+.+.
T Consensus 183 ~~~~~~~~~~~g~~~~~~---~~~~~~i~i~t~qs~~~~---~~~~~~~f~~VIvDEaH~~~----a~~~~~il~~~~~~ 252 (282)
T d1rifa_ 183 FSHAMIKKIGGGASKDDK---YKNDAPVVVGTWQTVVKQ---PKEWFSQFGMMMNDECHLAT----GKSISSIISGLNNC 252 (282)
T ss_dssp CCGGGEEECSTTCSSTTC---CCTTCSEEEECHHHHTTS---CGGGGGGEEEEEEETGGGCC----HHHHHHHTTTCTTC
T ss_pred cccccceeecceeccccc---ccccceEEEEeeehhhhh---cccccCCCCEEEEECCCCCC----chhHHHHHHhccCC
Confidence 544555666666543221 113468999999887443 22346789999999999875 35566777777544
Q ss_pred -cEEEecccCcH
Q 009500 316 -QILMYSATISQ 326 (533)
Q Consensus 316 -q~i~~SAT~~~ 326 (533)
..++||||+++
T Consensus 253 ~~rlGlTaT~~~ 264 (282)
T d1rifa_ 253 MFKFGLSGSLRD 264 (282)
T ss_dssp CEEEEECSSCCT
T ss_pred CeEEEEEeecCC
Confidence 46999999864
No 31
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.75 E-value=1e-18 Score=160.12 Aligned_cols=136 Identities=22% Similarity=0.184 Sum_probs=103.6
Q ss_pred CCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcC
Q 009500 157 MPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKG 236 (533)
Q Consensus 157 ~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~ 236 (533)
+|+++|.+++..++.+++.++.+|||+|||++++..+ .. .+.++||++|+++|+.||.+.++.+...
T Consensus 70 ~Lr~yQ~eav~~~~~~~~~ll~~~tG~GKT~~a~~~~-~~------------~~~~~Liv~p~~~L~~q~~~~~~~~~~~ 136 (206)
T d2fz4a1 70 SLRDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAI-NE------------LSTPTLIVVPTLALAEQWKERLGIFGEE 136 (206)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEESSSTTHHHHHHHHH-HH------------SCSCEEEEESSHHHHHHHHHHHGGGCGG
T ss_pred CcCHHHHHHHHHHHhCCCcEEEeCCCCCceehHHhHH-HH------------hcCceeEEEcccchHHHHHHHHHhhccc
Confidence 6899999999999999999999999999998765433 21 1346999999999999999998877432
Q ss_pred CCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchHHHHHHHHHhCCCCc
Q 009500 237 LPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQ 316 (533)
Q Consensus 237 ~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~~~~q 316 (533)
. +..+.|... ....|+++|++.+....... .+++++||+||||++... .+..++..++...
T Consensus 137 ---~-~~~~~~~~~--------~~~~i~i~t~~~~~~~~~~~---~~~~~lvIiDEaH~~~a~----~~~~i~~~~~~~~ 197 (206)
T d2fz4a1 137 ---Y-VGEFSGRIK--------ELKPLTVSTYDSAYVNAEKL---GNRFMLLIFDEVHHLPAE----SYVQIAQMSIAPF 197 (206)
T ss_dssp ---G-EEEESSSCB--------CCCSEEEEEHHHHHHTHHHH---TTTCSEEEEECSSCCCTT----THHHHHHTCCCSE
T ss_pred ---c-hhhcccccc--------cccccccceehhhhhhhHhh---CCcCCEEEEECCeeCCcH----HHHHHHhccCCCc
Confidence 2 333344322 33679999999886655432 346889999999998543 3456677777778
Q ss_pred EEEecccC
Q 009500 317 ILMYSATI 324 (533)
Q Consensus 317 ~i~~SAT~ 324 (533)
.++||||+
T Consensus 198 ~lgLTATl 205 (206)
T d2fz4a1 198 RLGLTATF 205 (206)
T ss_dssp EEEEEESC
T ss_pred EEEEecCC
Confidence 89999997
No 32
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.73 E-value=4e-20 Score=174.76 Aligned_cols=119 Identities=15% Similarity=0.242 Sum_probs=101.3
Q ss_pred chhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEe---
Q 009500 363 SNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVAT--- 439 (533)
Q Consensus 363 ~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT--- 439 (533)
...+...|.+++... +.++||||+++..|+.++.+|.. .+||++++.+|..+++.|++|+++|||||
T Consensus 10 ~~~~~~~l~~~l~~~---~~~~iif~~~~~~~~~l~~~l~~-------~~hg~~~~~~R~~~~~~f~~g~~~vLVaT~a~ 79 (248)
T d1gkub2 10 NDESISTLSSILEKL---GTGGIIYARTGEEAEEIYESLKN-------KFRIGIVTATKKGDYEKFVEGEIDHLIGTAHY 79 (248)
T ss_dssp SCCCTTTTHHHHTTS---CSCEEEEESSHHHHHHHHHTTTT-------SSCEEECTTSSSHHHHHHHHTSCSEEEEECC-
T ss_pred CchHHHHHHHHHHHh---CCCEEEEECCHHHHHHHHHHHHH-------hccCCCCHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 456777788888643 45799999999999999999972 27999999999999999999999999999
Q ss_pred -ccccccCCCCC-ccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCcCHHHHH
Q 009500 440 -GILGRGVELLG-VRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEENKNLFQ 495 (533)
Q Consensus 440 -~~~~~Gldi~~-v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~~~~~~~ 495 (533)
+++++|||+|+ +++|||||+|+ |.||+||+||.|+.|.+++++...+.....
T Consensus 80 ~~v~~rGlDip~~v~~VI~~d~P~----~~~r~gR~~R~g~~~~~~~~~~~~~~~~~~ 133 (248)
T d1gkub2 80 YGTLVRGLDLPERIRFAVFVGCPS----FRVTIEDIDSLSPQMVKLLAYLYRNVDEIE 133 (248)
T ss_dssp -----CCSCCTTTCCEEEEESCCE----EEEECSCGGGSCHHHHHHHHTTTSCHHHHH
T ss_pred cchhhhccCccccccEEEEeCCCc----chhhhhhhhccCcceEeeeeccHhhHHHHH
Confidence 78999999996 99999999995 889999999999999999988877665543
No 33
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.72 E-value=1e-18 Score=163.02 Aligned_cols=105 Identities=11% Similarity=0.161 Sum_probs=93.0
Q ss_pred CCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHH----------HHHHHHHhcCCCcEEEEeccccc---cCC
Q 009500 381 TPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKER----------REIMRSFLVGEVPVIVATGILGR---GVE 447 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r----------~~~~~~f~~g~~~VLvaT~~~~~---Gld 447 (533)
++++||||+|+..|+.|+..|+ ..|+.+..+|++++++.| ..+++.|..|+.++||+|+++++ |+|
T Consensus 36 ggk~LVFcnSR~~aE~La~~L~-~~Gi~a~~~Hgglsq~~R~~~gd~~i~~~~aLe~f~~G~~dvVVaT~~~a~g~~giD 114 (299)
T d1a1va2 36 GGRHLIFCHSKKKCDELAAKLV-ALGINAVAYYRGLDVSVIPTSGDVVVVATDALMTGFTGDFDSVIDCNTCVTQTVDFS 114 (299)
T ss_dssp SSEEEEECSSHHHHHHHHHHHH-HTTCCEEEECTTSCGGGSCSSSSEEEEECTTC---CCCCBSEEEECCEEEEEEEECC
T ss_pred CCCEEEECCcHHHHHHHHHHHH-HCCCCEEEEeCCchHHHHHhccchHHHHHHHHHHHhcCCCcEEEEEeehhccCCCCC
Confidence 4689999999999999999998 789999999999999876 46788999999999999999988 678
Q ss_pred CCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEec
Q 009500 448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVN 487 (533)
Q Consensus 448 i~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~ 487 (533)
++.+.+||++++|.|.+.|+||+||+|| |++|....++.
T Consensus 115 id~V~~VI~~d~P~SvesyIQRiGRTGR-Gr~G~~~~l~~ 153 (299)
T d1a1va2 115 LDPTFTIETTTLPQDAVSRTQRRGRTGR-GKPGIYRFVAP 153 (299)
T ss_dssp CSSSCEEEEEEEECBHHHHHHHHTTBCS-SSCEEEEESCS
T ss_pred CCcceEEEeCCCCCCHHHHHhhccccCC-CCCceEEEEec
Confidence 8888899999999999999999999999 89997766654
No 34
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.72 E-value=7.2e-17 Score=143.92 Aligned_cols=137 Identities=12% Similarity=0.144 Sum_probs=116.1
Q ss_pred HHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhh-cCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEeccccccCC
Q 009500 369 KLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVT-TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447 (533)
Q Consensus 369 ~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~-~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~~~Gld 447 (533)
.+.+.+......++++-+.||..+..+.++..+.+. .+..+..+||.|++++++.++..|.+|+++|||||.+++.|||
T Consensus 19 ~i~~~I~~El~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~TtvIEvGiD 98 (211)
T d2eyqa5 19 VVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGID 98 (211)
T ss_dssp HHHHHHHHHHTTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESSTTGGGSC
T ss_pred HHHHHHHHHHHcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEehhhhhccC
Confidence 466677766677889999999999999999988743 4678999999999999999999999999999999999999999
Q ss_pred CCCccEEEEcCCCC-CHhHHHHhhcccCCCCCccEEEEEecCcC--HHHHHHHHHHHHhcC
Q 009500 448 LLGVRQVIIFDMPN-SIKEYVHQIGRASQMGDEGTAIVFVNEEN--KNLFQELVDILKSSG 505 (533)
Q Consensus 448 i~~v~~VI~~~~p~-s~~~y~qriGR~gR~g~~g~~~~l~~~~~--~~~~~~l~~~l~~~~ 505 (533)
+|+++++|+.+... ...++.|..||+||.+..|+|++++.... .+...+=++.++...
T Consensus 99 vpnA~~iiI~~a~rfGLaQLhQLRGRVGR~~~~s~c~l~~~~~~~~~~~a~~RL~~l~~~~ 159 (211)
T d2eyqa5 99 IPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLE 159 (211)
T ss_dssp CTTEEEEEETTTTSSCHHHHHHHHTTCCBTTBCEEEEEEECCGGGSCHHHHHHHHHHTTCC
T ss_pred CCCCcEEEEecchhccccccccccceeeecCccceEEEEecCCcCCCchHHHHHHHHHhcc
Confidence 99999999999885 78888898999999999999999996542 233344445555543
No 35
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.71 E-value=2e-18 Score=157.53 Aligned_cols=117 Identities=20% Similarity=0.317 Sum_probs=101.2
Q ss_pred hhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEecccc
Q 009500 364 NKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILG 443 (533)
Q Consensus 364 ~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~~ 443 (533)
..|...|.+++... .+.++||||.+...++.|++.|. +..+||++++.+|..+++.|++|+++|||+|++++
T Consensus 78 ~~K~~~l~~ll~~~--~~~k~lvf~~~~~~~~~l~~~l~------~~~i~g~~~~~~R~~~l~~F~~~~~~vLv~~~~~~ 149 (200)
T d2fwra1 78 KNKIRKLREILERH--RKDKIIIFTRHNELVYRISKVFL------IPAITHRTSREEREEILEGFRTGRFRAIVSSQVLD 149 (200)
T ss_dssp SHHHHHHHHHHHHT--SSSCBCCBCSCHHHHHHHHHHTT------CCBCCSSSCSHHHHTHHHHHHHSSCSBCBCSSCCC
T ss_pred HHHHHHHHHHHHhC--CCCcEEEEeCcHHHHHHHHhhcC------cceeeCCCCHHHHHHHHHHhhcCCeeeeeecchhh
Confidence 45777888888764 35789999999999999988764 23579999999999999999999999999999999
Q ss_pred ccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCcc---EEEEEecC
Q 009500 444 RGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEG---TAIVFVNE 488 (533)
Q Consensus 444 ~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g---~~~~l~~~ 488 (533)
+|+|+|.+++||++++|+|+..|+||+||++|.|+.+ ..+.|+.+
T Consensus 150 ~Gidl~~~~~vi~~~~~~s~~~~~Q~iGR~~R~~~~k~~~~i~~~v~~ 197 (200)
T d2fwra1 150 EGIDVPDANVGVIMSGSGSAREYIQRLGRILRPSKGKKEAVLYELISR 197 (200)
T ss_dssp SSSCSCCBSEEEEECCSSCCHHHHHHHHHSBCCCTTTCCEEEEEEEEC
T ss_pred cccCCCCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCCcEEEEEEEecC
Confidence 9999999999999999999999999999999998643 44445544
No 36
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.70 E-value=1.2e-17 Score=142.65 Aligned_cols=135 Identities=16% Similarity=0.184 Sum_probs=91.5
Q ss_pred hCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCc
Q 009500 170 LSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDA 249 (533)
Q Consensus 170 ~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~ 249 (533)
..|++++++||||||||.+++..++..... .+.++++++|+++++.|+.+.+... +.......+...
T Consensus 5 ~~~~~~il~~~tGsGKT~~~~~~~~~~~~~---------~~~~vli~~p~~~l~~q~~~~~~~~----~~~~~~~~~~~~ 71 (140)
T d1yksa1 5 KKGMTTVLDFHPGAGKTRRFLPQILAECAR---------RRLRTLVLAPTRVVLSEMKEAFHGL----DVKFHTQAFSAH 71 (140)
T ss_dssp STTCEEEECCCTTSSTTTTHHHHHHHHHHH---------TTCCEEEEESSHHHHHHHHHHTTTS----CEEEESSCCCCC
T ss_pred HcCCcEEEEcCCCCChhHHHHHHHHHHhhh---------cCceeeeeecchhHHHHHHHHhhhh----hhhhcccccccc
Confidence 478999999999999998876666665543 3577999999999999887765332 222211111110
Q ss_pred hHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchH-HHHHHHHHhCCCCcEEEecccCc
Q 009500 250 MARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFR-DQVMQIFRAISLPQILMYSATIS 325 (533)
Q Consensus 250 ~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~-~~i~~i~~~~~~~q~i~~SAT~~ 325 (533)
. .....+.++|...+.... .....+.++++||+||||++...++. ..+...+...+..++|+||||+|
T Consensus 72 -~------~~~~~~~~~~~~~l~~~~-~~~~~~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~~~~~~~~l~lTATPp 140 (140)
T d1yksa1 72 -G------SGREVIDAMCHATLTYRM-LEPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRARANESATILMTATPP 140 (140)
T ss_dssp -C------CSSCCEEEEEHHHHHHHH-TSSSCCCCCSEEEETTTTCCSHHHHHHHHHHHHHHHTTSCEEEEECSSCT
T ss_pred -c------ccccchhhhhHHHHHHHH-hccccccceeEEEEccccccChhhHHHHHHHHHHhhCCCCCEEEEEcCCC
Confidence 0 123557778887776644 34456889999999999987544322 22233344457899999999997
No 37
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.64 E-value=3.4e-16 Score=133.12 Aligned_cols=126 Identities=14% Similarity=0.120 Sum_probs=86.6
Q ss_pred CCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchH
Q 009500 172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMA 251 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~ 251 (533)
.+..++.||||||||+++...+ . ..+.++||++|+++|++|+.+.+...... ......++....
T Consensus 8 ~~~~ll~apTGsGKT~~~~~~~----~---------~~~~~vli~~P~~~l~~q~~~~~~~~~~~---~~~~~~~~~~~~ 71 (136)
T d1a1va1 8 FQVAHLHAPTGSGKSTKVPAAY----A---------AQGYKVLVLNPSVAATLGFGAYMSKAHGV---DPNIRTGVRTIT 71 (136)
T ss_dssp CEEEEEECCTTSCTTTHHHHHH----H---------TTTCCEEEEESCHHHHHHHHHHHHHHHSC---CCEEECSSCEEC
T ss_pred CCEEEEEeCCCCCHHHHHHHHH----H---------HcCCcEEEEcChHHHHHHHHHHHHHHhhc---cccccccccccc
Confidence 4568999999999998543222 1 24667999999999999999988877543 223333443221
Q ss_pred HHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchHHHHHHHHHhC---CCCcEEEecccC
Q 009500 252 RQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI---SLPQILMYSATI 324 (533)
Q Consensus 252 ~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~---~~~q~i~~SAT~ 324 (533)
....++++|++.+... ....+.++++||+||+|++... ....+..++..+ +..+++++|||+
T Consensus 72 -------~~~~~~~~~~~~~~~~---~~~~~~~~~~vIiDE~H~~~~~-~~~~~~~~l~~~~~~~~~~~l~~TATP 136 (136)
T d1a1va1 72 -------TGSPITYSTYGKFLAD---GGCSGGAYDIIICDECHSTDAT-SILGIGTVLDQAETAGARLVVLATATP 136 (136)
T ss_dssp -------CCCSEEEEEHHHHHHT---TGGGGCCCSEEEEETTTCCSHH-HHHHHHHHHHHTTTTTCSEEEEEESSC
T ss_pred -------cccceEEEeeeeeccc---cchhhhcCCEEEEecccccCHH-HHHHHHHHHHHHHHCCCCcEEEEeCCC
Confidence 2356889998876443 3345788999999999986432 223344455544 556899999996
No 38
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.51 E-value=3e-14 Score=133.53 Aligned_cols=137 Identities=18% Similarity=0.165 Sum_probs=100.9
Q ss_pred chhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcC-CCcEEEE-ec
Q 009500 363 SNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG-EVPVIVA-TG 440 (533)
Q Consensus 363 ~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g-~~~VLva-T~ 440 (533)
.+.|...+.+++......+.++||||......+.+...+....+..+..+||+++..+|..+++.|.++ ...||++ |.
T Consensus 67 ~S~K~~~l~~~l~~~~~~g~kviIFs~~~~~~~~l~~~l~~~~~~~~~~i~G~~~~~~R~~~i~~F~~~~~~~vll~~~~ 146 (244)
T d1z5za1 67 RSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVK 146 (244)
T ss_dssp TCHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTSCHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred hhhHHHHHHHHHHhhcccccceEEEeeceehHHHHHHHHHhhccceEEEEecccchhccchhhhhhhccccchhcccccc
Confidence 356888899998876667789999999999999999999766789999999999999999999999887 4677655 57
Q ss_pred cccccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCcc--EEEEEecCc--CHHHHHHHHH
Q 009500 441 ILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEG--TAIVFVNEE--NKNLFQELVD 499 (533)
Q Consensus 441 ~~~~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g--~~~~l~~~~--~~~~~~~l~~ 499 (533)
..+.|+|++.+++||++++|+++..+.|++||+.|.|+.. .++.|+..+ |...+..+..
T Consensus 147 ~~g~Glnl~~a~~vi~~~~~wn~~~~~Qa~~R~~R~Gq~~~v~i~~l~~~~Tiee~i~~~~~~ 209 (244)
T d1z5za1 147 AGGFGINLTSANRVIHFDRWWNPAVEDQATDRVYRIGQTRNVIVHKLISVGTLEEKIDQLLAF 209 (244)
T ss_dssp TTCCCCCCTTCSEEEECSCCSCTTTC--------------CCEEEEEEETTSHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhcCchhhhHHHhhhcceeeecCCCCceEEEEEeeCCCHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999754 444455554 3333443333
No 39
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.48 E-value=1.9e-13 Score=133.77 Aligned_cols=141 Identities=17% Similarity=0.216 Sum_probs=114.3
Q ss_pred chhhHHHHHHHHHhc-cCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCc---EEEE
Q 009500 363 SNKKKQKLFDILMSK-QHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVP---VIVA 438 (533)
Q Consensus 363 ~~~k~~~l~~~l~~~-~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~---VLva 438 (533)
.+.|...|.+++... ...+.++|||+......+.+...|. ..|+.+..++|+++..+|..+++.|+++... +|++
T Consensus 99 ~S~Kl~~L~~ll~~~~~~~g~KvlIFs~~~~~ld~l~~~l~-~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~vlLls 177 (346)
T d1z3ix1 99 LSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCR-NRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLS 177 (346)
T ss_dssp GSHHHHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHHHH-HHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEE
T ss_pred cCHHHHHHHHHHHHHHHhcCCceeEEeehhhhhHHHHHHHh-hhhccccccccchhHHHHHHHHHhhhcccccceeeeec
Confidence 356777777777654 2446799999999999999999998 7899999999999999999999999987543 5778
Q ss_pred eccccccCCCCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEE--EEecCc--CHHHHHHHHHHHHhc
Q 009500 439 TGILGRGVELLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAI--VFVNEE--NKNLFQELVDILKSS 504 (533)
Q Consensus 439 T~~~~~Gldi~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~--~l~~~~--~~~~~~~l~~~l~~~ 504 (533)
|.+++.|+|+..+++||+||++|++..+.|++||+.|.|+...+. .|+... +...+........-.
T Consensus 178 ~~agg~GlnL~~a~~vi~~d~~wnp~~~~Qa~~R~~R~GQ~~~V~v~rli~~~TiEe~i~~~~~~K~~l~ 247 (346)
T d1z3ix1 178 SKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALS 247 (346)
T ss_dssp GGGSCTTCCCTTEEEEEECSCCSSHHHHHHHHTTSSSTTCCSCEEEEEEEETTSHHHHHHHHHHHHHHTS
T ss_pred chhhhhccccccceEEEEecCCCccchHhHhhhcccccCCCCceEEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999876544 444443 444455554444433
No 40
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.38 E-value=4.9e-12 Score=121.84 Aligned_cols=160 Identities=11% Similarity=0.107 Sum_probs=104.6
Q ss_pred CCCHHHHHHHHHHh---------CCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHH
Q 009500 157 MPTPVQMQAIPSAL---------SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVE 227 (533)
Q Consensus 157 ~p~~~Q~~~i~~i~---------~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~ 227 (533)
.++|||.+++..+. .+..+|+..++|.|||+.++. ++..+...... ......++|||+|.. |..||.
T Consensus 55 ~Lr~hQ~~gv~~l~~~~~~~~~~~~~g~iLaDemGlGKT~qaia-~l~~l~~~~~~--~~~~~~~~LIV~P~s-l~~qW~ 130 (298)
T d1z3ix2 55 VLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCIT-LIWTLLKQSPD--CKPEIDKVIVVSPSS-LVRNWY 130 (298)
T ss_dssp TCCHHHHHHHHHHHHHHTTSSSTTCCEEEECCCTTSCHHHHHHH-HHHHHHHCCTT--SSCSCSCEEEEECHH-HHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCceEEEeCCCCCHHHHHHH-HHHHHHHhccc--ccCCCCcEEEEccch-hhHHHH
Confidence 68899999998763 345689999999999987543 33333321110 112234699999985 779999
Q ss_pred HHHHHHhcCCCCeEEEEEcCCchHHHH--HHHHc------CCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhc
Q 009500 228 EQAKLLGKGLPFKTALVVGGDAMARQV--YRIQQ------GVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQR 299 (533)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~gg~~~~~~~--~~l~~------~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~ 299 (533)
+++.++... ....+.++++....... ..... ...++++|++.+..... .+.-.++++||+||+|++.+.
T Consensus 131 ~Ei~k~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~sy~~~~~~~~--~l~~~~~~~vI~DEaH~ikn~ 207 (298)
T d1z3ix2 131 NEVGKWLGG-RVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAE--VLHKGKVGLVICDEGHRLKNS 207 (298)
T ss_dssp HHHHHHHGG-GCCEEEECSSCHHHHHHHHHHHHCCCSSCCSCCEEEEEHHHHHHHTT--TTTTSCCCEEEETTGGGCCTT
T ss_pred HHHHhhcCC-ceeEEEEeCchHHHHHHHHHHhhhccCccccceEEEEeecccccchh--cccccceeeeecccccccccc
Confidence 999998764 34455555554332211 11111 24689999988865432 222346789999999999765
Q ss_pred chHHHHHHHHHhCCCCcEEEecccCc
Q 009500 300 GFRDQVMQIFRAISLPQILMYSATIS 325 (533)
Q Consensus 300 ~~~~~i~~i~~~~~~~q~i~~SAT~~ 325 (533)
+ ......+..+.....+++|||+-
T Consensus 208 ~--s~~~~a~~~l~~~~rllLTGTPi 231 (298)
T d1z3ix2 208 D--NQTYLALNSMNAQRRVLISGTPI 231 (298)
T ss_dssp C--HHHHHHHHHHCCSEEEEECSSCS
T ss_pred c--chhhhhhhccccceeeeecchHH
Confidence 4 33334455567788899999983
No 41
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.33 E-value=1.4e-12 Score=123.83 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=81.0
Q ss_pred CCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEeccccccCCCCCccEEEEcCC-
Q 009500 381 TPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVELLGVRQVIIFDM- 459 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~~~Gldi~~v~~VI~~~~- 459 (533)
.++++|||++..+++.++..|+ ..|..+..+||.+...++. .|++|+.+|||||+++++|+|+ ++.+||+.+.
T Consensus 36 ~g~~~~F~~s~~~~~~~a~~L~-~~g~~V~~l~~~~~~~e~~----~~~~~~~~~~~~t~~~~~~~~~-~~~~vid~g~~ 109 (299)
T d1yksa2 36 KRPTAWFLPSIRAANVMAASLR-KAGKSVVVLNRKTFEREYP----TIKQKKPDFILATDIAEMGANL-CVERVLDCRTA 109 (299)
T ss_dssp CSCEEEECSCHHHHHHHHHHHH-HTTCCEEECCSSSCC------------CCCSEEEESSSTTCCTTC-CCSEEEECCEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHH-hcCCeEEEEcCcCcHhHHh----hhhcCCcCEEEEechhhhceec-CceEEEecCce
Confidence 5789999999999999999998 7899999999999877654 4678999999999999999999 5999997553
Q ss_pred ------------------CCCHhHHHHhhcccCCCCCccEEEEEec
Q 009500 460 ------------------PNSIKEYVHQIGRASQMGDEGTAIVFVN 487 (533)
Q Consensus 460 ------------------p~s~~~y~qriGR~gR~g~~g~~~~l~~ 487 (533)
|.|...-.||.||+||.+....++.++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~qr~gr~gr~~~~~~~~~~y~ 155 (299)
T d1yksa2 110 FKPVLVDEGRKVAIKGPLRISASSAAQRRGRIGRNPNRDGDSYYYS 155 (299)
T ss_dssp EEEEEETTTTEEEEEEEEECCHHHHHHHHTTSSCCTTCCCEEEEEC
T ss_pred eceeeecCCCCeeEEeeeecCHHHHHHhcccccccCCCceEEEEeC
Confidence 3477888999999999865555555554
No 42
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=99.33 E-value=5.7e-12 Score=108.19 Aligned_cols=128 Identities=18% Similarity=0.244 Sum_probs=105.7
Q ss_pred EEecchhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcC-CCcEEE
Q 009500 359 IWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG-EVPVIV 437 (533)
Q Consensus 359 ~~~~~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g-~~~VLv 437 (533)
.+....+|...+++.+......+.|+||++.|.+.++.++..|. ..+++...+++.....+-. +-. ..| .-.|.|
T Consensus 12 vf~T~~eK~~AIi~eV~~~~~~grPVLIgT~SIe~SE~ls~~L~-~~gi~h~vLnAk~~~~Ea~--II~-~Ag~~g~VtI 87 (175)
T d1tf5a4 12 IYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLK-NKGIPHQVLNAKNHEREAQ--IIE-EAGQKGAVTI 87 (175)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTCCEEEEESCHHHHHHHHHHHH-TTTCCCEEECSSCHHHHHH--HHT-TTTSTTCEEE
T ss_pred EEcCHHHHHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHH-HcCCCceeehhhhHHHHHH--HHH-hccCCCceee
Confidence 45566788888888887777778899999999999999999998 8899999999876543333 222 234 456999
Q ss_pred EeccccccCCCCC--------ccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCcC
Q 009500 438 ATGILGRGVELLG--------VRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEEN 490 (533)
Q Consensus 438 aT~~~~~Gldi~~--------v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~~ 490 (533)
||++++||.||.- =-+||..-.|.|.....|..||+||.|.+|.+..|++-+|
T Consensus 88 ATNmAGRGtDikl~~~v~~~GGLhVI~t~~~~s~Rid~Ql~GR~gRQGdpGs~~~~~sleD 148 (175)
T d1tf5a4 88 ATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMED 148 (175)
T ss_dssp EETTSSTTCCCCCCTTSGGGTSEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEETTS
T ss_pred hhhHHHcCCCccchHHHHhCCCcEEEEeccCcchhHHHHHhcchhhhCCCcccEEEEEcCH
Confidence 9999999999852 1389999999999999999999999999999999987655
No 43
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.30 E-value=4.5e-12 Score=117.32 Aligned_cols=147 Identities=14% Similarity=0.186 Sum_probs=99.1
Q ss_pred CCCHHHHHHHHHHh----CCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHH
Q 009500 157 MPTPVQMQAIPSAL----SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKL 232 (533)
Q Consensus 157 ~p~~~Q~~~i~~i~----~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~ 232 (533)
.++|+|.+++..+. .+..+|+..++|.|||+.++.. +.++.. .....++||++|. .+..||.+++.+
T Consensus 12 ~L~~yQ~~~v~~~~~~~~~~~g~iLaDe~GlGKT~~~i~~-~~~~~~-------~~~~~~~LIv~p~-~l~~~W~~e~~~ 82 (230)
T d1z63a1 12 NLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAV-FSDAKK-------ENELTPSLVICPL-SVLKNWEEELSK 82 (230)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCEEECCCTTSCHHHHHHHH-HHHHHH-------TTCCSSEEEEECS-TTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhhcCCCEEEEeCCCCChHHHHHHh-hhhhhh-------cccccccceecch-hhhhHHHHHHHh
Confidence 68899999997654 4556899999999999986543 343332 1344569999995 666889999998
Q ss_pred HhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchHHHHHHHHHhC
Q 009500 233 LGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI 312 (533)
Q Consensus 233 ~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~ 312 (533)
+.... .+....+...... ....+|+++|++.+....... --.+++||+||+|++.... ......+..+
T Consensus 83 ~~~~~--~~~~~~~~~~~~~-----~~~~~vvi~~~~~~~~~~~l~---~~~~~~vI~DEah~~k~~~--s~~~~~~~~l 150 (230)
T d1z63a1 83 FAPHL--RFAVFHEDRSKIK-----LEDYDIILTTYAVLLRDTRLK---EVEWKYIVIDEAQNIKNPQ--TKIFKAVKEL 150 (230)
T ss_dssp HCTTS--CEEECSSSTTSCC-----GGGSSEEEEEHHHHTTCHHHH---TCCEEEEEEETGGGGSCTT--SHHHHHHHTS
T ss_pred hcccc--cceeeccccchhh-----ccCcCEEEeeHHHHHhHHHHh---cccceEEEEEhhhcccccc--hhhhhhhhhh
Confidence 86543 3322222111111 134789999998875433321 2357899999999987543 2333445566
Q ss_pred CCCcEEEecccC
Q 009500 313 SLPQILMYSATI 324 (533)
Q Consensus 313 ~~~q~i~~SAT~ 324 (533)
.....+++|||+
T Consensus 151 ~a~~r~~LTgTP 162 (230)
T d1z63a1 151 KSKYRIALTGTP 162 (230)
T ss_dssp CEEEEEEECSSC
T ss_pred ccceEEEEecch
Confidence 667789999998
No 44
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=98.89 E-value=3.3e-08 Score=89.89 Aligned_cols=172 Identities=20% Similarity=0.233 Sum_probs=128.8
Q ss_pred CCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHH
Q 009500 154 GYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLL 233 (533)
Q Consensus 154 g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~ 233 (533)
|. .|+++|..+--.+..|+ ++.+.||-|||+++.+|+.-..+. |..+-|++.+--||..=.+|+..+
T Consensus 78 G~-RhyDVQLiGgi~L~~G~--iaem~TGEGKTL~a~l~a~l~al~----------g~~vhvvTvNdyLA~RDae~m~~i 144 (273)
T d1tf5a3 78 GM-FPFKVQLMGGVALHDGN--IAEMKTGEGKTLTSTLPVYLNALT----------GKGVHVVTVNEYLASRDAEQMGKI 144 (273)
T ss_dssp SC-CCCHHHHHHHHHHHTTS--EEECCTTSCHHHHHHHHHHHHHTT----------SSCEEEEESSHHHHHHHHHHHHHH
T ss_pred ce-EEehhHHHHHHHHHhhh--heeecCCCcchhHHHHHHHHHHhc----------CCCceEEecCccccchhhhHHhHH
Confidence 44 78888988888888886 899999999999999998877654 556889999999999988999999
Q ss_pred hcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHH-HHHHHcCC------CCCCCeeEEEEeccchhhh-cc-----
Q 009500 234 GKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRL-IDLLMKHD------IELDDIRMFVLDEVDCMLQ-RG----- 300 (533)
Q Consensus 234 ~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l-~~~l~~~~------~~l~~i~~vVvDEah~~~~-~~----- 300 (533)
.+.+|+.+.++..+.......... .++|+.+|...| .++++.+- .....+.+.|+||+|.++= ..
T Consensus 145 y~~lGlsvg~~~~~~~~~~r~~~Y--~~di~Ygt~~e~~fDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiliDeartpli 222 (273)
T d1tf5a3 145 FEFLGLTVGLNLNSMSKDEKREAY--AADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLI 222 (273)
T ss_dssp HHHTTCCEEECCTTSCHHHHHHHH--HSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEEETHHHHHTTTTTCEEE
T ss_pred HHHcCCCccccccccCHHHHHHHh--hCCceecchhhhhhhhcchhhhcChhhhccCCCCEEEEEcchhhhhhccCCceE
Confidence 999999999888776655543333 489999999888 55555421 2246689999999998761 11
Q ss_pred --------hHHHHHHHHHhCCCCcEEEecccCcHHHHHHHHhhcCCeEEE
Q 009500 301 --------FRDQVMQIFRAISLPQILMYSATISQEVEKMSSSISKDIVVV 342 (533)
Q Consensus 301 --------~~~~i~~i~~~~~~~q~i~~SAT~~~~~~~~~~~~~~~~~~i 342 (533)
-.-.+...++. -.++-+||+|...+..++...+..+.+.|
T Consensus 223 isg~~~~~a~it~q~~f~~--y~~l~gmtgta~~~~~e~~~iy~l~v~~i 270 (273)
T d1tf5a3 223 ISGQSMTLATITFQNYFRM--YEKLAGMTGTAKTEEEEFRNIYNMQVVTI 270 (273)
T ss_dssp EEEEEEEEEEEEHHHHHTT--SSEEEEEESCCGGGHHHHHHHHCCCEEEC
T ss_pred eccCccchhhhhHHHHHHH--HHHHhCCccccHHHHHHHHhccCCceEeC
Confidence 00112333443 35889999999887888877776655543
No 45
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.85 E-value=3.7e-08 Score=90.01 Aligned_cols=170 Identities=16% Similarity=0.204 Sum_probs=126.4
Q ss_pred CCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcC
Q 009500 157 MPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKG 236 (533)
Q Consensus 157 ~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~ 236 (533)
.|+++|.-.--++..| -++.+.||-|||+++.+|+.-..+. |..+-|++..--||..=.+|+..+.+.
T Consensus 97 RhyDVQLiGgi~l~~g--~iaem~TGEGKTL~a~l~a~l~al~----------g~~vhvvTvNdyLA~RDa~~m~~~y~~ 164 (288)
T d1nkta3 97 RPFDVQVMGAAALHLG--NVAEMKTGEGKTLTCVLPAYLNALA----------GNGVHIVTVNDYLAKRDSEWMGRVHRF 164 (288)
T ss_dssp CCCHHHHHHHHHHHTT--EEEECCTTSCHHHHTHHHHHHHHTT----------TSCEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred eeeeehhHHHHHHhhh--hhhcccCCCchhHHHHHHHHHHHhc----------CCCeEEEecCchhhhhhHHHHHHHHHH
Confidence 6788888887777666 4999999999999999999877664 556889999999999988999999999
Q ss_pred CCCeEEEEEcCCchHHHHHHHHcCCceeecChHHH-HHHHHcCC------CCCCCeeEEEEeccchhh-hcch-------
Q 009500 237 LPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRL-IDLLMKHD------IELDDIRMFVLDEVDCML-QRGF------- 301 (533)
Q Consensus 237 ~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l-~~~l~~~~------~~l~~i~~vVvDEah~~~-~~~~------- 301 (533)
+|+.+.++..+......... -.++|+.+|...| .++++.+- .-...+.+.|+||+|.++ |...
T Consensus 165 lGlsvg~~~~~~~~~~~~~~--Y~~di~Y~t~~e~gfDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiLiDeartpLiis~ 242 (288)
T d1nkta3 165 LGLQVGVILATMTPDERRVA--YNADITYGTNNEFGFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSILIDEARTPLIISN 242 (288)
T ss_dssp TTCCEEECCTTCCHHHHHHH--HHSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEETTHHHHHTTGGGSCEEEEE
T ss_pred hCCCcCcccccCChHHHHHH--hhcccccccHHHHhhhhhhhhhccChhhhcccCCcEEEEEcccccccccccCceEecc
Confidence 99999999888776554333 3489999999888 55555321 224678999999999876 2110
Q ss_pred ----HHHHHHHHHhCCCCcEEEecccCcHHHHHHHHhhcCCeEEE
Q 009500 302 ----RDQVMQIFRAISLPQILMYSATISQEVEKMSSSISKDIVVV 342 (533)
Q Consensus 302 ----~~~i~~i~~~~~~~q~i~~SAT~~~~~~~~~~~~~~~~~~i 342 (533)
...+...++. -.++-+|+.|...+..++...+..+.+.+
T Consensus 243 ~~~a~it~qn~fr~--y~kl~gmtgta~te~~E~~~iy~l~v~~i 285 (288)
T d1nkta3 243 QTLATITLQNYFRL--YDKLAGMTGTAQTEAAELHEIYKLGVVSI 285 (288)
T ss_dssp EEEEEECHHHHHTT--SSEEEEEESCCGGGHHHHHHHHCCEEEEC
T ss_pred CCcchhhHHHHHHH--HHHHhCCcccHHHHHHHHHHHhCCceEec
Confidence 0112222222 45788999999888888877776555443
No 46
>d1nkta4 c.37.1.19 (A:397-615) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.81 E-value=2e-08 Score=87.27 Aligned_cols=130 Identities=18% Similarity=0.220 Sum_probs=106.7
Q ss_pred EEEecchhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcC-CCcEE
Q 009500 358 AIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVG-EVPVI 436 (533)
Q Consensus 358 ~~~~~~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g-~~~VL 436 (533)
.++.....|...+++.+......+.|+||.+.|.+..+.|+..|. ..++++.++++.-. +|+.-+-. ++| .-.|-
T Consensus 11 ~Vy~T~~~K~~Avv~ei~~~h~~GqPVLVGT~SVe~SE~lS~lL~-~~gi~h~vLNAK~h--erEAeIIA-qAG~~GaVT 86 (219)
T d1nkta4 11 LIYKTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFT-KRRIPHNVLNAKYH--EQEATIIA-VAGRRGGVT 86 (219)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHH-HTTCCCEEECSSCH--HHHHHHHH-TTTSTTCEE
T ss_pred eEEcCHHHHHHHHHHHHHHHHhcCCCEEEeeCcHHHHHHHHHHHH-HhccchhccchhhH--HHHHHHHH-hcccCCcEE
Confidence 445667788899998888887888999999999999999999998 78999999999754 33333222 345 45799
Q ss_pred EEeccccccCCCCC----------------------------------------------------ccEEEEcCCCCCHh
Q 009500 437 VATGILGRGVELLG----------------------------------------------------VRQVIIFDMPNSIK 464 (533)
Q Consensus 437 vaT~~~~~Gldi~~----------------------------------------------------v~~VI~~~~p~s~~ 464 (533)
|||++++||.||.= ==+||-.....|-.
T Consensus 87 IATNMAGRGTDI~LGgn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGL~VIGTErHeSrR 166 (219)
T d1nkta4 87 VATNMAGRGTDIVLGGNVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASKEAKEVIEAGGLYVLGTERHESRR 166 (219)
T ss_dssp EEETTCSTTCCCCTTCCHHHHHHHHHHHTTCCTTTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTSEEEEECSCCSSHH
T ss_pred eeccccCCCCceeecCchhhhhHHHhhhcccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecccccccc
Confidence 99999999999931 12788888889999
Q ss_pred HHHHhhcccCCCCCccEEEEEecCcCH
Q 009500 465 EYVHQIGRASQMGDEGTAIVFVNEENK 491 (533)
Q Consensus 465 ~y~qriGR~gR~g~~g~~~~l~~~~~~ 491 (533)
--.|-.||+||.|.+|...+|++-+|.
T Consensus 167 IDnQLRGRsGRQGDPGsSrFflSLeDd 193 (219)
T d1nkta4 167 IDNQLRGRSGRQGDPGESRFYLSLGDE 193 (219)
T ss_dssp HHHHHHHTSSGGGCCEEEEEEEETTSH
T ss_pred ccccccccccccCCCccceeEEeccHH
Confidence 999999999999999999999987664
No 47
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=98.04 E-value=7.7e-06 Score=79.21 Aligned_cols=141 Identities=16% Similarity=0.195 Sum_probs=82.0
Q ss_pred CCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhc
Q 009500 156 DMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235 (533)
Q Consensus 156 ~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~ 235 (533)
......|.+|+..+++++-++|.|+.|+|||... ..++..+... ....+.++++++||-.-+..+.+.......
T Consensus 147 ~~~~~~Q~~A~~~al~~~~~vI~G~pGTGKTt~i-~~~l~~l~~~-----~~~~~~~I~l~ApTgkAA~~L~e~~~~~~~ 220 (359)
T d1w36d1 147 SDEINWQKVAAAVALTRRISVISGGPGTGKTTTV-AKLLAALIQM-----ADGERCRIRLAAPTGKAAARLTESLGKALR 220 (359)
T ss_dssp TTSCCHHHHHHHHHHTBSEEEEECCTTSTHHHHH-HHHHHHHHHT-----CSSCCCCEEEEBSSHHHHHHHHHHHTHHHH
T ss_pred cccccHHHHHHHHHHcCCeEEEEcCCCCCceehH-HHHHHHHHHH-----HhccCCeEEEecCcHHHHHHHHHHHHHHHh
Confidence 3467899999999999999999999999999863 3333333321 124567899999999888877766544332
Q ss_pred CCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHH------HHHHcCCCCCCCeeEEEEeccchhhhcchHHHHHHHH
Q 009500 236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLI------DLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIF 309 (533)
Q Consensus 236 ~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~------~~l~~~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~ 309 (533)
..+....... ....-..|..++. ..+..+......+++|||||+-.+. .+.+..++
T Consensus 221 ~~~~~~~~~~--------------~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~----~~l~~~ll 282 (359)
T d1w36d1 221 QLPLTDEQKK--------------RIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMID----LPMMSRLI 282 (359)
T ss_dssp HSSCCSCCCC--------------SCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGCB----HHHHHHHH
T ss_pred hcCchhhhhh--------------hhhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhccC----HHHHHHHH
Confidence 2211000000 0000011111111 1122233445578899999999653 34555667
Q ss_pred HhCCC-CcEEEe
Q 009500 310 RAISL-PQILMY 320 (533)
Q Consensus 310 ~~~~~-~q~i~~ 320 (533)
..++. .++|++
T Consensus 283 ~~~~~~~~lILv 294 (359)
T d1w36d1 283 DALPDHARVIFL 294 (359)
T ss_dssp HTCCTTCEEEEE
T ss_pred HHhcCCCEEEEE
Confidence 76643 455554
No 48
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=97.58 E-value=6.5e-05 Score=70.73 Aligned_cols=71 Identities=21% Similarity=0.106 Sum_probs=51.2
Q ss_pred CCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhc
Q 009500 157 MPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235 (533)
Q Consensus 157 ~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~ 235 (533)
+++|-|.+++.. ....++|.|+.|||||.+.+.-+ .+++... .....++||+++|+.++..+.+.+.++..
T Consensus 1 ~L~~eQ~~av~~--~~~~~lI~g~aGTGKTt~l~~rv-~~ll~~~-----~~~~~~ILvlt~tn~a~~~i~~~~~~~~~ 71 (306)
T d1uaaa1 1 RLNPGQQQAVEF--VTGPCLVLAGAGSGKTRVITNKI-AHLIRGC-----GYQARHIAAVTFTNKAAREMKERVGQTLG 71 (306)
T ss_dssp CCCHHHHHHHHC--CSSEEEECCCTTSCHHHHHHHHH-HHHHHHH-----CCCGGGEEEEESSHHHHHHHHHHHHHHSC
T ss_pred CcCHHHHHHHhC--CCCCEEEEeeCCccHHHHHHHHH-HHHHHhc-----CCChhHEEEEeCcHHHHHHHHHHHHHhcC
Confidence 478999999965 34569999999999998754333 3333221 11234699999999999988887776643
No 49
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=97.20 E-value=0.00045 Score=65.22 Aligned_cols=70 Identities=21% Similarity=0.197 Sum_probs=50.3
Q ss_pred CCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHh
Q 009500 157 MPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLG 234 (533)
Q Consensus 157 ~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~ 234 (533)
.+++-|.+++.. .+..++|.|+.|||||.+.+--+...+.. . .....++|++++|+..+..+...+....
T Consensus 11 ~L~~eQ~~~v~~--~~g~~lV~g~aGSGKTt~l~~ri~~ll~~-~-----~~~p~~il~lt~t~~aa~~~~~~~~~~~ 80 (318)
T d1pjra1 11 HLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAE-K-----HVAPWNILAITFTNKAAREMRERVQSLL 80 (318)
T ss_dssp TSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHT-T-----CCCGGGEEEEESSHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHhC--CCCCEEEEecCCccHHHHHHHHHHHHHHc-C-----CCCHHHeEeEeccHHHHHHHHHHHHhhc
Confidence 478999999975 34579999999999999754433333322 1 1122469999999999999888776543
No 50
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=96.95 E-value=0.0027 Score=55.77 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHHh----CCC---cEEEEccCCCchhHHHHH
Q 009500 158 PTPVQMQAIPSAL----SGK---SLLVSANTGSGKTASFLV 191 (533)
Q Consensus 158 p~~~Q~~~i~~i~----~g~---~vli~a~TGsGKT~~~ll 191 (533)
++|||..++..+. +++ .+|+.||.|+|||..+..
T Consensus 3 ~yPw~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~ 43 (207)
T d1a5ta2 3 WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYA 43 (207)
T ss_dssp CCGGGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHH
Confidence 5689988887664 444 389999999999986443
No 51
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.71 E-value=0.026 Score=49.04 Aligned_cols=66 Identities=21% Similarity=0.210 Sum_probs=36.6
Q ss_pred EEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEccc-HHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHH
Q 009500 175 LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPT-RELCIQVEEQAKLLGKGLPFKTALVVGGDAMAR 252 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Pt-r~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~ 252 (533)
+++++|||+|||++..-.+ .++.. .....+||-+-| |.=| .++++.+++.+++.+.....+.....
T Consensus 12 i~lvGptGvGKTTTiAKLA-~~~~~--------~g~kV~lit~Dt~R~gA---~eQL~~~a~~l~v~~~~~~~~~d~~~ 78 (211)
T d2qy9a2 12 ILMVGVNGVGKTTTIGKLA-RQFEQ--------QGKSVMLAAGDTFRAAA---VEQLQVWGQRNNIPVIAQHTGADSAS 78 (211)
T ss_dssp EEEECCTTSCHHHHHHHHH-HHHHT--------TTCCEEEECCCTTCHHH---HHHHHHHHHHTTCCEECCSTTCCHHH
T ss_pred EEEECCCCCCHHHHHHHHH-HHHHH--------CCCcEEEEecccccccc---hhhhhhhhhhcCCcccccccCCCHHH
Confidence 5679999999998754333 22222 223334444444 3333 34455555555777666655555444
No 52
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=96.39 E-value=0.004 Score=64.13 Aligned_cols=71 Identities=20% Similarity=0.175 Sum_probs=51.6
Q ss_pred CCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHh
Q 009500 156 DMPTPVQMQAIPSALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLG 234 (533)
Q Consensus 156 ~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~ 234 (533)
..+++-|.+++.. ...+++|.|..|||||.+.+--+ .+++... .....++|+|+.|+..+.++.+.++...
T Consensus 10 ~~L~~eQ~~~v~~--~~~~~lV~A~AGSGKT~~lv~ri-~~ll~~~-----~~~p~~Il~ltft~~Aa~ei~~Ri~~~l 80 (623)
T g1qhh.1 10 AHLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRI-AYLMAEK-----HVAPWNILAITFTNKAAREMRERVQSLL 80 (623)
T ss_dssp TTSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHH-HHHHHTT-----CCCGGGEEEEESSHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHcC--CCCCEEEEEeCchHHHHHHHHHH-HHHHHcC-----CCCcccEEEEeccHHHHHHHHHHHHHhc
Confidence 4788999999863 45679999999999999754433 3444321 1123469999999999998888776653
No 53
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.32 E-value=0.0065 Score=55.06 Aligned_cols=91 Identities=14% Similarity=0.100 Sum_probs=69.5
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHHhhc---CCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEeccc-cccCCCCCccEE
Q 009500 379 HFTPPAVVYVGSRLGADLLSNAISVTT---GMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGIL-GRGVELLGVRQV 454 (533)
Q Consensus 379 ~~~~~~lIF~~s~~~~~~l~~~l~~~~---~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~-~~Gldi~~v~~V 454 (533)
..+.++++.+++..-|...+..+++.. +..+..+||+++..+|..+.....+|+++|+|+|-.+ ...+.+.++..|
T Consensus 130 ~~g~q~~~m~Pt~~La~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~~~~f~~Lglv 209 (264)
T d1gm5a3 130 EAGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLV 209 (264)
T ss_dssp HHTSCEEEECSCHHHHHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCCCCSCCCEE
T ss_pred hcccceeEEeehHhhhHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcCCCCcccccee
Confidence 345689999999988888777776444 7899999999999999999999999999999999754 557888888888
Q ss_pred EEcCCCCCHhHHHHhhc
Q 009500 455 IIFDMPNSIKEYVHQIG 471 (533)
Q Consensus 455 I~~~~p~s~~~y~qriG 471 (533)
|.----. -.|.||-+
T Consensus 210 iiDEqH~--fgv~Qr~~ 224 (264)
T d1gm5a3 210 IIDEQHR--FGVKQREA 224 (264)
T ss_dssp EEESCCC--C-----CC
T ss_pred eeccccc--cchhhHHH
Confidence 8654322 23556543
No 54
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.26 E-value=0.098 Score=45.34 Aligned_cols=83 Identities=20% Similarity=0.255 Sum_probs=42.3
Q ss_pred EEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccH-HHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHH
Q 009500 175 LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTR-ELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ 253 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr-~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~ 253 (533)
+++++|||+|||+...-.+ .++.. ...+.+||-+.|- .=+. ++++.+++.+++.+.....+.....-
T Consensus 14 i~lvGptGvGKTTTiAKLA-a~~~~--------~~~kV~lit~Dt~R~gA~---eQL~~~a~~l~i~~~~~~~~~d~~~~ 81 (213)
T d1vmaa2 14 IMVVGVNGTGKTTSCGKLA-KMFVD--------EGKSVVLAAADTFRAAAI---EQLKIWGERVGATVISHSEGADPAAV 81 (213)
T ss_dssp EEEECCTTSSHHHHHHHHH-HHHHH--------TTCCEEEEEECTTCHHHH---HHHHHHHHHHTCEEECCSTTCCHHHH
T ss_pred EEEECCCCCCHHHHHHHHH-HHHHH--------CCCceEEEeecccccchh---HHHHHHhhhcCccccccCCCCcHHHH
Confidence 5779999999998754333 23332 2234566666543 3332 34444444446665544444333221
Q ss_pred H-----HHHHcCCc-eeecChH
Q 009500 254 V-----YRIQQGVE-LIVGTPG 269 (533)
Q Consensus 254 ~-----~~l~~~~~-Iiv~Tp~ 269 (533)
. ....++++ |+|=|+|
T Consensus 82 ~~~~~~~~~~~~~d~ilIDTaG 103 (213)
T d1vmaa2 82 AFDAVAHALARNKDVVIIDTAG 103 (213)
T ss_dssp HHHHHHHHHHTTCSEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeccc
Confidence 1 11123444 5567776
No 55
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.08 E-value=0.027 Score=48.82 Aligned_cols=20 Identities=35% Similarity=0.557 Sum_probs=15.6
Q ss_pred CCcEEEEccCCCchhHHHHH
Q 009500 172 GKSLLVSANTGSGKTASFLV 191 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~ll 191 (533)
++-+++++|||+|||++..-
T Consensus 6 ~~vi~lvGptGvGKTTTiaK 25 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAK 25 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHH
Confidence 34567899999999987543
No 56
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.96 E-value=0.021 Score=49.30 Aligned_cols=111 Identities=14% Similarity=0.165 Sum_probs=60.9
Q ss_pred HHHHHHHHh---CCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHH--HHHHHHHHHHHHhcC
Q 009500 162 QMQAIPSAL---SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRE--LCIQVEEQAKLLGKG 236 (533)
Q Consensus 162 Q~~~i~~i~---~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~--L~~Q~~~~~~~~~~~ 236 (533)
|.+.+..+. .+.++++.|+.|+|||..+...+ ..+.. .....+-++++.|... -+.|+.+
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~-~~i~~------~~~~h~D~~~i~~~~~~I~Id~IR~-------- 66 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELP-EYVEK------FPPKASDVLEIDPEGENIGIDDIRT-------- 66 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHH-HHHHT------SCCCTTTEEEECCSSSCBCHHHHHH--------
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHHHHH-HHHhc------cccCCCCEEEEeCCcCCCCHHHHHH--------
Confidence 556666665 34478999999999998654332 33322 1123445777776311 0111211
Q ss_pred CCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchHHHHHHHHHhCCCCc
Q 009500 237 LPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQ 316 (533)
Q Consensus 237 ~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~~~~q 316 (533)
+.+.+.... .....+++|+||||+|... ....+..+++..+..-
T Consensus 67 ----------------------------------i~~~~~~~~-~~~~~KviIId~ad~l~~~-aqNaLLK~LEEPp~~t 110 (198)
T d2gnoa2 67 ----------------------------------IKDFLNYSP-ELYTRKYVIVHDCERMTQQ-AANAFLKALEEPPEYA 110 (198)
T ss_dssp ----------------------------------HHHHHTSCC-SSSSSEEEEETTGGGBCHH-HHHHTHHHHHSCCTTE
T ss_pred ----------------------------------HHHHHhhCc-ccCCCEEEEEeCccccchh-hhhHHHHHHhCCCCCc
Confidence 122222222 2345789999999998643 3456666666654433
Q ss_pred EEEeccc
Q 009500 317 ILMYSAT 323 (533)
Q Consensus 317 ~i~~SAT 323 (533)
++.+.++
T Consensus 111 ~fiLit~ 117 (198)
T d2gnoa2 111 VIVLNTR 117 (198)
T ss_dssp EEEEEES
T ss_pred eeeeccC
Confidence 3334433
No 57
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.86 E-value=0.0074 Score=52.63 Aligned_cols=129 Identities=16% Similarity=0.229 Sum_probs=61.5
Q ss_pred EEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcc--cHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHH
Q 009500 175 LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTP--TRELCIQVEEQAKLLGKGLPFKTALVVGGDAMAR 252 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~P--tr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~ 252 (533)
+++++|||+|||+...-.+. ++.. .+.++.+++. .|.-|. ++++.+++.+++.+...........
T Consensus 13 i~lvGp~GvGKTTTiaKLA~-~~~~---------~g~kV~lit~Dt~R~gA~---eQL~~~a~~l~v~~~~~~~~~~~~~ 79 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAKLAL-YYKG---------KGRRPLLVAADTQRPAAR---EQLRLLGEKVGVPVLEVMDGESPES 79 (207)
T ss_dssp EEEECCTTTTHHHHHHHHHH-HHHH---------TTCCEEEEECCSSCHHHH---HHHHHHHHHHTCCEEECCTTCCHHH
T ss_pred EEEECCCCCCHHHHHHHHHH-HHHH---------CCCcEEEEecccccchHH---HHHHHHHHhcCCccccccccchhhH
Confidence 46699999999986544332 2222 1233544443 444443 3333443333555544443333222
Q ss_pred HHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcc-hHHHHHHHHHhCC-CCcEEEecccCcHHHHH
Q 009500 253 QVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRG-FRDQVMQIFRAIS-LPQILMYSATISQEVEK 330 (533)
Q Consensus 253 ~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~-~~~~i~~i~~~~~-~~q~i~~SAT~~~~~~~ 330 (533)
-.... ..+. .+.+.++|++|=+-+..... ...++..+..... ...++.++|+...+...
T Consensus 80 ~~~~~--------------~~~~-----~~~~~d~vlIDTaGr~~~d~~~~~el~~~~~~~~~~~~llv~~a~~~~~~~~ 140 (207)
T d1ls1a2 80 IRRRV--------------EEKA-----RLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALS 140 (207)
T ss_dssp HHHHH--------------HHHH-----HHHTCCEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGTHHHHH
T ss_pred HHHHH--------------HHHH-----hhccCcceeecccccchhhhhhHHHHHHHHhhcCCceEEEEeccccchhHHH
Confidence 11000 0000 12344567777776543221 2344444444443 34456677777766655
Q ss_pred HHHhh
Q 009500 331 MSSSI 335 (533)
Q Consensus 331 ~~~~~ 335 (533)
.+..+
T Consensus 141 ~~~~f 145 (207)
T d1ls1a2 141 VARAF 145 (207)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 58
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=95.85 E-value=0.037 Score=48.34 Aligned_cols=43 Identities=21% Similarity=0.375 Sum_probs=27.9
Q ss_pred CeeEEEEeccchhhhc-chHHHHHHHHHhC--CCCcEEEecccCcH
Q 009500 284 DIRMFVLDEVDCMLQR-GFRDQVMQIFRAI--SLPQILMYSATISQ 326 (533)
Q Consensus 284 ~i~~vVvDEah~~~~~-~~~~~i~~i~~~~--~~~q~i~~SAT~~~ 326 (533)
..++|++|++|.+... .+...+..++..+ ...++|+.|...|.
T Consensus 97 ~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~ 142 (213)
T d1l8qa2 97 SVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQ 142 (213)
T ss_dssp TCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGG
T ss_pred hccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcch
Confidence 4678999999988643 3445555666555 45666666655554
No 59
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=95.85 E-value=0.032 Score=49.28 Aligned_cols=94 Identities=15% Similarity=0.143 Sum_probs=74.8
Q ss_pred hhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHh---hcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEecc
Q 009500 365 KKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISV---TTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGI 441 (533)
Q Consensus 365 ~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~---~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~ 441 (533)
.|-...+..+......+.++++.+++..-+...+..+++ ..+..+..+||..+..+|..+...+.+|+.+|||.|..
T Consensus 88 GKT~V~~~a~~~~~~~g~qv~~l~Pt~~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths 167 (233)
T d2eyqa3 88 GKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHK 167 (233)
T ss_dssp TTHHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTH
T ss_pred CcHHHHHHHHHHHHHcCCceEEEccHHHhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehh
Confidence 444444444444445677899999999999998888875 35678899999999999999999999999999999985
Q ss_pred c-cccCCCCCccEEEEcC
Q 009500 442 L-GRGVELLGVRQVIIFD 458 (533)
Q Consensus 442 ~-~~Gldi~~v~~VI~~~ 458 (533)
+ ...+.++++..||.-.
T Consensus 168 ~l~~~~~f~~LgLiIiDE 185 (233)
T d2eyqa3 168 LLQSDVKFKDLGLLIVDE 185 (233)
T ss_dssp HHHSCCCCSSEEEEEEES
T ss_pred hhccCCccccccceeeec
Confidence 4 4578888888888744
No 60
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=95.75 E-value=0.0088 Score=57.89 Aligned_cols=67 Identities=30% Similarity=0.292 Sum_probs=49.3
Q ss_pred CCCHHHHHHHHHHh----CC-CcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHH
Q 009500 157 MPTPVQMQAIPSAL----SG-KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAK 231 (533)
Q Consensus 157 ~p~~~Q~~~i~~i~----~g-~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~ 231 (533)
.|+.-|=+||..+. .| ++.++.|-||||||++.. .++.. .+..+|||+|+..+|.|+++.++
T Consensus 11 ~p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA-~l~~~------------~~rp~LVVt~n~~~A~qL~~dL~ 77 (413)
T d1t5la1 11 EPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTIS-NVIAQ------------VNKPTLVIAHNKTLAGQLYSELK 77 (413)
T ss_dssp CCCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHH-HHHHH------------HTCCEEEECSSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEeCCCCcHHHHHHH-HHHHH------------hCCCEEEEeCCHHHHHHHHHHHH
Confidence 46667777776665 34 568899999999997432 22222 13349999999999999999999
Q ss_pred HHhcC
Q 009500 232 LLGKG 236 (533)
Q Consensus 232 ~~~~~ 236 (533)
.+...
T Consensus 78 ~~l~~ 82 (413)
T d1t5la1 78 EFFPH 82 (413)
T ss_dssp HHCTT
T ss_pred HHcCC
Confidence 98643
No 61
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.35 E-value=0.01 Score=53.22 Aligned_cols=40 Identities=8% Similarity=0.164 Sum_probs=24.3
Q ss_pred CCeeEEEEeccchhhhcchHHHHHHHHHhCCCCcEEEeccc
Q 009500 283 DDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQILMYSAT 323 (533)
Q Consensus 283 ~~i~~vVvDEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT 323 (533)
....++|+||+|.+... ....+..++......-.+.++++
T Consensus 130 ~~~~iiiide~d~l~~~-~~~~l~~~~e~~~~~~~~Il~tn 169 (252)
T d1sxje2 130 HRYKCVIINEANSLTKD-AQAALRRTMEKYSKNIRLIMVCD 169 (252)
T ss_dssp -CCEEEEEECTTSSCHH-HHHHHHHHHHHSTTTEEEEEEES
T ss_pred CCceEEEeccccccccc-cchhhhcccccccccccceeeec
Confidence 45679999999998544 34556666666544333333433
No 62
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=95.19 E-value=0.013 Score=51.11 Aligned_cols=17 Identities=18% Similarity=0.333 Sum_probs=9.8
Q ss_pred EEEEccCCCchhHHHHH
Q 009500 175 LLVSANTGSGKTASFLV 191 (533)
Q Consensus 175 vli~a~TGsGKT~~~ll 191 (533)
+++++|||+|||++..-
T Consensus 15 i~lvGptGvGKTTTiAK 31 (211)
T d1j8yf2 15 IMLVGVQGTGKATTAGK 31 (211)
T ss_dssp EEEECSCCC----HHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 56689999999987543
No 63
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.09 E-value=0.012 Score=51.93 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=24.6
Q ss_pred CCCeeEEEEeccchhhhcchHHHHHHHHHhCCC-CcEEEecccC
Q 009500 282 LDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISL-PQILMYSATI 324 (533)
Q Consensus 282 l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~~~-~q~i~~SAT~ 324 (533)
.....++|+||+|.+.... ...+...+..... ..+++.+...
T Consensus 99 ~~~~kviiiDe~d~~~~~~-~~~ll~~~e~~~~~~~~i~~~~~~ 141 (224)
T d1sxjb2 99 PGKHKIVILDEADSMTAGA-QQALRRTMELYSNSTRFAFACNQS 141 (224)
T ss_dssp TTCCEEEEEESGGGSCHHH-HHTTHHHHHHTTTTEEEEEEESCG
T ss_pred CcceEEEEEecccccchhH-HHHHhhhccccccceeeeeccCch
Confidence 3456799999999987643 3334444444433 3444444443
No 64
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=95.08 E-value=0.28 Score=43.14 Aligned_cols=40 Identities=10% Similarity=0.268 Sum_probs=24.5
Q ss_pred CCeeEEEEeccchhhhcchHHHHHHHHHhCCCCcEEEeccc
Q 009500 283 DDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQILMYSAT 323 (533)
Q Consensus 283 ~~i~~vVvDEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT 323 (533)
....++|+||+|.|... ....+..+++..+....+.+.++
T Consensus 114 ~~~kviiIde~d~l~~~-~q~~Llk~lE~~~~~~~~il~tn 153 (239)
T d1njfa_ 114 GRFKVYLIDEVHMLSRH-SFNALLKTLEEPPEHVKFLLATT 153 (239)
T ss_dssp SSSEEEEEETGGGSCHH-HHHHHHHHHHSCCTTEEEEEEES
T ss_pred CCCEEEEEECcccCCHH-HHHHHHHHHhcCCCCeEEEEEcC
Confidence 35679999999998533 34456666665444444444444
No 65
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.74 E-value=0.092 Score=46.04 Aligned_cols=18 Identities=39% Similarity=0.545 Sum_probs=15.1
Q ss_pred CcEEEEccCCCchhHHHH
Q 009500 173 KSLLVSANTGSGKTASFL 190 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~l 190 (533)
.++|+.||+|+|||+.+-
T Consensus 46 ~~lll~Gp~G~GKTtla~ 63 (231)
T d1iqpa2 46 PHLLFAGPPGVGKTTAAL 63 (231)
T ss_dssp CEEEEESCTTSSHHHHHH
T ss_pred CeEEEECCCCCcHHHHHH
Confidence 469999999999998643
No 66
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.74 E-value=0.015 Score=51.50 Aligned_cols=16 Identities=31% Similarity=0.594 Sum_probs=14.0
Q ss_pred cEEEEccCCCchhHHH
Q 009500 174 SLLVSANTGSGKTASF 189 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ 189 (533)
++++.||+|+|||+..
T Consensus 35 ~lll~Gp~G~GKTtl~ 50 (237)
T d1sxjd2 35 HMLFYGPPGTGKTSTI 50 (237)
T ss_dssp CEEEECSTTSSHHHHH
T ss_pred eEEEECCCCCChHHHH
Confidence 5899999999999853
No 67
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=94.73 E-value=0.07 Score=47.59 Aligned_cols=54 Identities=15% Similarity=0.119 Sum_probs=30.0
Q ss_pred cccCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHh--CCCcEEEEccCCCchhHHH
Q 009500 133 PILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSAL--SGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 133 ~~~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~--~g~~vli~a~TGsGKT~~~ 189 (533)
|-.+|++++--+...+.|... ..+ ..+.+.+..+- ..+.+|+.||+|+|||+.+
T Consensus 4 p~~~~~di~G~~~~k~~l~~~--i~~-l~~~~~~~~~g~~~~~giLl~GppGtGKT~la 59 (247)
T d1ixza_ 4 PKVTFKDVAGAEEAKEELKEI--VEF-LKNPSRFHEMGARIPKGVLLVGPPGVGKTHLA 59 (247)
T ss_dssp CSCCGGGCCSCHHHHHHHHHH--HHH-HHCHHHHHHTTCCCCSEEEEECCTTSSHHHHH
T ss_pred CCCcHHHHccHHHHHHHHHHH--HHH-HHCHHHHHHcCCCCCceEEEecCCCCChhHHH
Confidence 446888887666665555431 000 00111121111 2356999999999999853
No 68
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=94.68 E-value=0.28 Score=40.77 Aligned_cols=111 Identities=9% Similarity=0.150 Sum_probs=72.8
Q ss_pred CCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHH---HHc-CCceeecChHHHHHHHHcCCCCCCC
Q 009500 209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYR---IQQ-GVELIVGTPGRLIDLLMKHDIELDD 284 (533)
Q Consensus 209 ~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~---l~~-~~~Iiv~Tp~~l~~~l~~~~~~l~~ 284 (533)
.+.++||.|+|+.-+..+.+.+... ++++..+.|+.+..+.... +.. ..+|+|+| +++ ...+++.+
T Consensus 30 ~g~r~lvfc~t~~~~~~l~~~L~~~----Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT-----~v~-~~GiDip~ 99 (174)
T d1c4oa2 30 RGERTLVTVLTVRMAEELTSFLVEH----GIRARYLHHELDAFKRQALIRDLRLGHYDCLVGI-----NLL-REGLDIPE 99 (174)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEES-----CCC-CTTCCCTT
T ss_pred cCCcEEEEEcchhHHHHHHHHHHhc----CCceEEEecccchHHHHHHHHHHHCCCeEEEEee-----eee-eeeccCCC
Confidence 4678999999999999888877764 7899999999886664433 333 48999999 333 45678999
Q ss_pred eeEEEEeccchhhhcchHHHHHHHHHhC---CCCcEEEecccCcHHHH
Q 009500 285 IRMFVLDEVDCMLQRGFRDQVMQIFRAI---SLPQILMYSATISQEVE 329 (533)
Q Consensus 285 i~~vVvDEah~~~~~~~~~~i~~i~~~~---~~~q~i~~SAT~~~~~~ 329 (533)
+++||+=.++...-.....+|....-+. .....+++.......+.
T Consensus 100 V~~Vi~~~~~~~~~~~~~~~~iq~~GR~gR~~~g~~~~~~~~~~~~~~ 147 (174)
T d1c4oa2 100 VSLVAILDADKEGFLRSERSLIQTIGRAARNARGEVWLYADRVSEAMQ 147 (174)
T ss_dssp EEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTTCEEEEECSSCCHHHH
T ss_pred CcEEEEeccccccccchhHHHHHHhhhhhhcCCCeeEEeecCCCHHHH
Confidence 9999997776533222223333333333 23344555444444433
No 69
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=94.41 E-value=0.12 Score=45.96 Aligned_cols=17 Identities=41% Similarity=0.376 Sum_probs=14.5
Q ss_pred CcEEEEccCCCchhHHH
Q 009500 173 KSLLVSANTGSGKTASF 189 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ 189 (533)
+.+|+.||+|+|||..+
T Consensus 41 ~~vLL~GppGtGKT~la 57 (246)
T d1d2na_ 41 VSVLLEGPPHSGKTALA 57 (246)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECcCCCCHHHHH
Confidence 35899999999999853
No 70
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=94.14 E-value=0.017 Score=53.99 Aligned_cols=52 Identities=27% Similarity=0.397 Sum_probs=33.5
Q ss_pred HHHHHHHHH-HhCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHH
Q 009500 160 PVQMQAIPS-ALSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTREL 222 (533)
Q Consensus 160 ~~Q~~~i~~-i~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L 222 (533)
+-+...+.. +..+++++|+|+||||||+. +-.++..+ ....+++.+--+.||
T Consensus 153 ~~~~~~l~~~v~~~~nili~G~tgSGKTT~-l~al~~~i----------~~~~rivtiEd~~El 205 (323)
T d1g6oa_ 153 EQAISAIKDGIAIGKNVIVCGGTGSGKTTY-IKSIMEFI----------PKEERIISIEDTEEI 205 (323)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESTTSSHHHH-HHHHGGGS----------CTTCCEEEEESSCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccccchHH-HHHHhhhc----------ccccceeeccchhhh
Confidence 333444433 34788999999999999983 33332211 234568888788787
No 71
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.97 E-value=0.061 Score=47.11 Aligned_cols=46 Identities=15% Similarity=0.265 Sum_probs=27.6
Q ss_pred CCCCCCCeeEEEEeccchhhhcchHHHHHHHHHhCCCCcEEEecccC
Q 009500 278 HDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQILMYSATI 324 (533)
Q Consensus 278 ~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT~ 324 (533)
.........++|+||+|.+.... ...+..++......-++.++.+.
T Consensus 93 ~~~~~~~~kiiiiDe~d~~~~~~-~~~Ll~~le~~~~~~~~~~~~~~ 138 (227)
T d1sxjc2 93 RQIFSKGFKLIILDEADAMTNAA-QNALRRVIERYTKNTRFCVLANY 138 (227)
T ss_dssp CCSSSCSCEEEEETTGGGSCHHH-HHHHHHHHHHTTTTEEEEEEESC
T ss_pred ccccCCCeEEEEEeccccchhhH-HHHHHHHhhhcccceeeccccCc
Confidence 33445566799999999886543 44555566655444444444443
No 72
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=93.92 E-value=0.041 Score=53.10 Aligned_cols=48 Identities=21% Similarity=0.325 Sum_probs=31.9
Q ss_pred cccCcccCCCCHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCc--EEEEccCCCchhHHHHHHHHHHH
Q 009500 133 PILSFSSCSLSQKLLQNIEAAGYDMPTPVQMQAIPSALSGKS--LLVSANTGSGKTASFLVPVISQC 197 (533)
Q Consensus 133 ~~~~f~~~~l~~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g~~--vli~a~TGsGKT~~~llp~l~~l 197 (533)
+..++++++++ +.|.+.+..++.... +|++||||||||+. +..++..+
T Consensus 133 ~~~~l~~LG~~----------------~~~~~~l~~l~~~~~GliLvtGpTGSGKSTT-l~~~l~~~ 182 (401)
T d1p9ra_ 133 TRLDLHSLGMT----------------AHNHDNFRRLIKRPHGIILVTGPTGSGKSTT-LYAGLQEL 182 (401)
T ss_dssp TCCCGGGSCCC----------------HHHHHHHHHHHTSSSEEEEEECSTTSCHHHH-HHHHHHHH
T ss_pred cchhhhhhccc----------------HHHHHHHHHHHhhhhceEEEEcCCCCCccHH-HHHHhhhh
Confidence 44567777666 445555656664443 78899999999986 44555554
No 73
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=92.79 E-value=0.35 Score=40.96 Aligned_cols=120 Identities=14% Similarity=0.080 Sum_probs=64.0
Q ss_pred CCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHH-----HHHHHHHHHHhcC---CCCeEEE
Q 009500 172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELC-----IQVEEQAKLLGKG---LPFKTAL 243 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~-----~Q~~~~~~~~~~~---~~~~~~~ 243 (533)
..|+++.+++|.|||....-.+.. +..... +..-.+.+++-+-+.+-++ -++.+.++.+... ...++++
T Consensus 43 k~n~lLvG~pGVGKTalv~~LA~r-i~~~~v--p~~L~~~~i~~ld~~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iIL 119 (195)
T d1jbka_ 43 KNNPVLIGEPGVGKTAIVEGLAQR-IINGEV--PEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 119 (195)
T ss_dssp SCEEEEECCTTSCHHHHHHHHHHH-HHHTCS--CGGGTTCEEEEECHHHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEE
T ss_pred CCCeEEEecCCcccHHHHHHHHHH-HHhCCC--CHHHcCceEEEeeHHHHhccCCccHHHHHHHHHHHHHHhcCCCcEEE
Confidence 358999999999999865443332 222111 1112344555554444332 2455545443321 1122332
Q ss_pred EE-------------cCCchHHHHHHH-HcC-Ccee-ecChHHHHHHHHcCCCCCCCeeEEEEeccc
Q 009500 244 VV-------------GGDAMARQVYRI-QQG-VELI-VGTPGRLIDLLMKHDIELDDIRMFVLDEVD 294 (533)
Q Consensus 244 ~~-------------gg~~~~~~~~~l-~~~-~~Ii-v~Tp~~l~~~l~~~~~~l~~i~~vVvDEah 294 (533)
.. |+.+..+.+... ..+ ..+| -+||+.+..++..+.--...|..|-++|-+
T Consensus 120 fIDeih~l~~~g~~~g~~d~~~~Lkp~L~rg~l~~IgatT~eey~~~~e~d~aL~rrF~~I~V~Ep~ 186 (195)
T d1jbka_ 120 FIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 186 (195)
T ss_dssp EEETGGGGTT------CCCCHHHHHHHHHTTSCCEEEEECHHHHHHHTTTCHHHHTTEEEEECCCCC
T ss_pred EcchHHHHhcCCCCCCcccHHHHHHHHHhCCCceEEecCCHHHHHHHHHcCHHHHhcCCEeecCCCC
Confidence 22 222333333322 222 4444 589999988887766556788999999965
No 74
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=92.22 E-value=0.18 Score=40.37 Aligned_cols=88 Identities=16% Similarity=0.221 Sum_probs=50.3
Q ss_pred EEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHH
Q 009500 175 LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV 254 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~ 254 (533)
-++.||+.||||.- ++-.+.+.. ..+.+++++-|...- +... .+.. ..|..
T Consensus 5 ~~i~GpMfsGKTte-Li~~~~~~~---------~~~~kv~~ikp~~D~---------R~~~----~i~s-~~g~~----- 55 (139)
T d2b8ta1 5 EFITGPMFAGKTAE-LIRRLHRLE---------YADVKYLVFKPKIDT---------RSIR----NIQS-RTGTS----- 55 (139)
T ss_dssp EEEECSTTSCHHHH-HHHHHHHHH---------HTTCCEEEEEECCCG---------GGCS----SCCC-CCCCS-----
T ss_pred EEEEccccCHHHHH-HHHHHHHHH---------HCCCcEEEEEEcccc---------cccc----eEEc-ccCce-----
Confidence 47899999999984 333333332 235669999997432 1111 1111 11111
Q ss_pred HHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhh
Q 009500 255 YRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCML 297 (533)
Q Consensus 255 ~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~ 297 (533)
-..+.+.+...+.+.+..... ..++++|.+||++-+.
T Consensus 56 -----~~~~~~~~~~~~~~~~~~~~~-~~~~dvI~IDE~QFf~ 92 (139)
T d2b8ta1 56 -----LPSVEVESAPEILNYIMSNSF-NDETKVIGIDEVQFFD 92 (139)
T ss_dssp -----SCCEEESSTHHHHHHHHSTTS-CTTCCEEEECSGGGSC
T ss_pred -----eeeEEeccchhhHHHHHhhcc-ccCcCEEEechhhhcc
Confidence 123455555666566654432 4678999999999653
No 75
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=91.69 E-value=0.18 Score=43.31 Aligned_cols=93 Identities=13% Similarity=0.115 Sum_probs=68.3
Q ss_pred CCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHH---HHHHHc-CCceeecChHHHHHHHHcCCCCCC
Q 009500 208 QKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQ---VYRIQQ-GVELIVGTPGRLIDLLMKHDIELD 283 (533)
Q Consensus 208 ~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~---~~~l~~-~~~Iiv~Tp~~l~~~l~~~~~~l~ 283 (533)
..+.++.||+|..+-...+.+.++++... .++..++|..+..+. +....+ ..+|+||| ..++ -.+++.
T Consensus 29 ~rGgQvy~V~p~I~~~e~~~~~l~~~~p~--~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~T-----tvIE-vGiDvp 100 (211)
T d2eyqa5 29 LRGGQVYYLYNDVENIQKAAERLAELVPE--ARIAIGHGQMRERELERVMNDFHHQRFNVLVCT-----TIIE-TGIDIP 100 (211)
T ss_dssp TTTCEEEEECCCSSCHHHHHHHHHHHCTT--SCEEECCSSCCHHHHHHHHHHHHTTSCCEEEES-----STTG-GGSCCT
T ss_pred HcCCeEEEEEcCccchhhHHHHHHHhCCc--eEEEEEEeccCHHHHHHHHHHHHcCCcceEEEe-----hhhh-hccCCC
Confidence 46888999999998888888888887653 577777776654432 333344 49999999 3443 456889
Q ss_pred CeeEEEEeccchhhhcchHHHHHHHHHhC
Q 009500 284 DIRMFVLDEVDCMLQRGFRDQVMQIFRAI 312 (533)
Q Consensus 284 ~i~~vVvDEah~~~~~~~~~~i~~i~~~~ 312 (533)
+..++|+..|+++. ..++.++.-+.
T Consensus 101 nA~~iiI~~a~rfG----LaQLhQLRGRV 125 (211)
T d2eyqa5 101 TANTIIIERADHFG----LAQLHQLRGRV 125 (211)
T ss_dssp TEEEEEETTTTSSC----HHHHHHHHTTC
T ss_pred CCcEEEEecchhcc----cccccccccee
Confidence 99999999999863 45666766665
No 76
>d1nc8a_ g.40.1.1 (A:) HIV nucleocapsid {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=91.51 E-value=0.013 Score=31.90 Aligned_cols=12 Identities=33% Similarity=0.816 Sum_probs=10.6
Q ss_pred CCeeeeeccccc
Q 009500 36 EPKCVICGRYGE 47 (533)
Q Consensus 36 ~~~c~~c~~~~~ 47 (533)
-..|+.||++||
T Consensus 6 ~ikCfNCGkeGH 17 (29)
T d1nc8a_ 6 VIRCWNCGKEGH 17 (29)
T ss_dssp CCBCTTTSCBSS
T ss_pred eeEeecCCccch
Confidence 457999999999
No 77
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.19 E-value=0.12 Score=43.00 Aligned_cols=25 Identities=16% Similarity=0.282 Sum_probs=18.7
Q ss_pred CcEEEEccCCCchhHHHHHHHHHHHH
Q 009500 173 KSLLVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~llp~l~~l~ 198 (533)
|++++.||+|+|||+. +..++..+.
T Consensus 2 k~v~ItG~~GtGKTtl-~~~i~~~l~ 26 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTL-IHKASEVLK 26 (189)
T ss_dssp CCEEEESCCSSCHHHH-HHHHHHHHH
T ss_pred cEEEEECCCCCcHHHH-HHHHHHHHH
Confidence 6899999999999984 444444444
No 78
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=91.01 E-value=0.31 Score=46.56 Aligned_cols=67 Identities=25% Similarity=0.346 Sum_probs=46.7
Q ss_pred CCCHHHHHHHHHHh----CCCc-EEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHH
Q 009500 157 MPTPVQMQAIPSAL----SGKS-LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAK 231 (533)
Q Consensus 157 ~p~~~Q~~~i~~i~----~g~~-vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~ 231 (533)
.|+.-|-++|..+. .|+. ..+.|-+||+||++ +..+..- .+..+|||+|+...|.++++.++
T Consensus 8 ~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~--~A~l~~~-----------~~rp~LvVt~~~~~A~~l~~dL~ 74 (408)
T d1c4oa1 8 SPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVT--MAKVIEA-----------LGRPALVLAPNKILAAQLAAEFR 74 (408)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHH--HHHHHHH-----------HTCCEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEecCCCCHHHHH--HHHHHHH-----------hCCCEEEEeCCHHHHHHHHHHHH
Confidence 44555655666544 5554 68899999999974 2222211 12348999999999999999999
Q ss_pred HHhcC
Q 009500 232 LLGKG 236 (533)
Q Consensus 232 ~~~~~ 236 (533)
.+...
T Consensus 75 ~~l~~ 79 (408)
T d1c4oa1 75 ELFPE 79 (408)
T ss_dssp HHCTT
T ss_pred HhcCc
Confidence 98643
No 79
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=90.99 E-value=1.6 Score=36.26 Aligned_cols=77 Identities=17% Similarity=0.275 Sum_probs=58.9
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHH---Hc-CCceeecChHHHHHHHHcCCCCCCCe
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRI---QQ-GVELIVGTPGRLIDLLMKHDIELDDI 285 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l---~~-~~~Iiv~Tp~~l~~~l~~~~~~l~~i 285 (533)
+.++||.++++.-+..+...++. .++.+..++|+.+.......+ ++ ..+|+||| +++ ...+++.++
T Consensus 31 ~~~~iif~~~~~~~~~~~~~l~~----~g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaT-----dv~-~rGiDip~v 100 (181)
T d1t5la2 31 NERTLVTTLTKKMAEDLTDYLKE----AGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGI-----NLL-REGLDIPEV 100 (181)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHT----TTCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEES-----CCC-SSSCCCTTE
T ss_pred CCeEEEEeehhhhhHHHHHHHHh----CCcceeEecCCccHHHHHHHHHHHHCCCCCEEEeh-----hHH-HccCCCCCC
Confidence 56799999999998876666554 478999999998876654433 33 48999999 333 355789999
Q ss_pred eEEEEeccchh
Q 009500 286 RMFVLDEVDCM 296 (533)
Q Consensus 286 ~~vVvDEah~~ 296 (533)
++||.-++...
T Consensus 101 ~~VI~~d~p~~ 111 (181)
T d1t5la2 101 SLVAILDADKE 111 (181)
T ss_dssp EEEEETTTTSC
T ss_pred CEEEEecCCcc
Confidence 99999888753
No 80
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=90.70 E-value=0.1 Score=49.32 Aligned_cols=18 Identities=39% Similarity=0.464 Sum_probs=15.3
Q ss_pred CCcEEEEccCCCchhHHH
Q 009500 172 GKSLLVSANTGSGKTASF 189 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~ 189 (533)
-.++|..||||+|||..+
T Consensus 68 ~~niLfiGPTGvGKTElA 85 (364)
T d1um8a_ 68 KSNILLIGPTGSGKTLMA 85 (364)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CcceeeeCCCCccHHHHH
Confidence 357999999999999854
No 81
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=90.01 E-value=0.25 Score=43.29 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=25.1
Q ss_pred CCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcc
Q 009500 171 SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTP 218 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~P 218 (533)
.|.-+++.|++|+|||..++- ++..+. ..+..+++++-
T Consensus 25 ~gsl~li~G~pGsGKT~l~~q-ia~~~~---------~~~~~~~~is~ 62 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSR-FVENAC---------ANKERAILFAY 62 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHH-HHHHHH---------TTTCCEEEEES
T ss_pred CCeEEEEEeCCCCCHHHHHHH-HHHHHH---------Hhccccceeec
Confidence 456789999999999985443 333333 23455777764
No 82
>d1dsqa_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=89.76 E-value=0.05 Score=28.07 Aligned_cols=13 Identities=38% Similarity=1.027 Sum_probs=11.5
Q ss_pred CCeeeeecccccc
Q 009500 36 EPKCVICGRYGEY 48 (533)
Q Consensus 36 ~~~c~~c~~~~~~ 48 (533)
-|+|+-||+-||-
T Consensus 2 gpvcfscgktghi 14 (26)
T d1dsqa_ 2 GPVCFSCGKTGHI 14 (26)
T ss_dssp CCBCTTTCCBSSC
T ss_pred CCEEEecCCcccc
Confidence 3899999999993
No 83
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=88.98 E-value=0.1 Score=46.81 Aligned_cols=15 Identities=27% Similarity=0.155 Sum_probs=12.1
Q ss_pred EEEEccCCCchhHHH
Q 009500 175 LLVSANTGSGKTASF 189 (533)
Q Consensus 175 vli~a~TGsGKT~~~ 189 (533)
+++.||+|+|||++.
T Consensus 49 l~l~GppGtGKT~l~ 63 (287)
T d1w5sa2 49 YGSIGRVGIGKTTLA 63 (287)
T ss_dssp EECTTCCSSSHHHHH
T ss_pred EEeECCCCCCHHHHH
Confidence 456799999999863
No 84
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=88.91 E-value=0.081 Score=51.47 Aligned_cols=19 Identities=37% Similarity=0.466 Sum_probs=16.4
Q ss_pred CCCcEEEEccCCCchhHHH
Q 009500 171 SGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~ 189 (533)
..+|+|+.||||+|||+.+
T Consensus 48 ~ksNILliGPTGvGKTlLA 66 (443)
T d1g41a_ 48 TPKNILMIGPTGVGKTEIA 66 (443)
T ss_dssp CCCCEEEECCTTSSHHHHH
T ss_pred ccccEEEECCCCCCHHHHH
Confidence 4579999999999999853
No 85
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=88.82 E-value=0.12 Score=41.87 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=16.7
Q ss_pred CCcEEEEccCCCchhHHHHH
Q 009500 172 GKSLLVSANTGSGKTASFLV 191 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~ll 191 (533)
.+++++.|++|||||+++-.
T Consensus 2 ~k~I~l~G~~GsGKSTvak~ 21 (169)
T d1kaga_ 2 KRNIFLVGPMGAGKSTIGRQ 21 (169)
T ss_dssp CCCEEEECCTTSCHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHH
Confidence 46899999999999986543
No 86
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=88.62 E-value=0.94 Score=36.53 Aligned_cols=73 Identities=15% Similarity=0.301 Sum_probs=52.2
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHH---Hc-CCceeecChHHHHHHHHcCCCCCCCe
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRI---QQ-GVELIVGTPGRLIDLLMKHDIELDDI 285 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l---~~-~~~Iiv~Tp~~l~~~l~~~~~~l~~i 285 (533)
+.++||.|+++.-+.++...+++. ++.+..+.|+.+.......+ .. ...|+||| +.+.+ .+++..+
T Consensus 28 ~~k~IIF~~s~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~r~~~~~~f~~~~~~ilv~T-----~~~~~-Gid~~~v 97 (155)
T d1hv8a2 28 EFYGLVFCKTKRDTKELASMLRDI----GFKAGAIHGDLSQSQREKVIRLFKQKKIRILIAT-----DVMSR-GIDVNDL 97 (155)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHT----TCCEEEECSSSCHHHHHHHHHHHHTTSSSEEEEC-----TTHHH-HCCCSCC
T ss_pred CCCEEEEECchHHHHHHHhhhccc----ccccccccccchhhhhhhhhhhhhcccceeeeeh-----hHHhh-hhhhccC
Confidence 456999999999999888877764 67888888887766544333 23 47899999 33333 3567888
Q ss_pred eEEEEec
Q 009500 286 RMFVLDE 292 (533)
Q Consensus 286 ~~vVvDE 292 (533)
++||.=+
T Consensus 98 ~~Vi~~d 104 (155)
T d1hv8a2 98 NCVINYH 104 (155)
T ss_dssp SEEEESS
T ss_pred cEEEEec
Confidence 8888533
No 87
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=88.10 E-value=0.13 Score=47.43 Aligned_cols=19 Identities=37% Similarity=0.466 Sum_probs=16.4
Q ss_pred CCCcEEEEccCCCchhHHH
Q 009500 171 SGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~ 189 (533)
..+++|+.||||+|||..+
T Consensus 48 ~~~~iLl~GPpG~GKT~lA 66 (309)
T d1ofha_ 48 TPKNILMIGPTGVGKTEIA 66 (309)
T ss_dssp CCCCEEEECCTTSSHHHHH
T ss_pred CCceEEEECCCCCCHHHHH
Confidence 4578999999999999854
No 88
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=87.80 E-value=0.25 Score=47.63 Aligned_cols=43 Identities=21% Similarity=0.350 Sum_probs=30.5
Q ss_pred CCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELC 223 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~ 223 (533)
..++++|.|+||||||.. +..++..+.. .+..++|+=|.-++.
T Consensus 49 ~~~H~~I~G~tGsGKT~~-l~~li~~~~~---------~g~~~iiiD~kge~~ 91 (433)
T d1e9ra_ 49 EPRHLLVNGATGTGKSVL-LRELAYTGLL---------RGDRMVIVDPNGDML 91 (433)
T ss_dssp GGGCEEEEECTTSSHHHH-HHHHHHHHHH---------TTCEEEEEEETTHHH
T ss_pred ccceEEEEeCCCCcHHHH-HHHHHHHHHh---------CCCCEEEEeCChhHH
Confidence 357899999999999975 4444544443 245688888887764
No 89
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=87.67 E-value=0.87 Score=40.52 Aligned_cols=121 Identities=17% Similarity=0.088 Sum_probs=63.1
Q ss_pred CCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHH-----HHHHHHHHHHhcCC--CCeEEEE
Q 009500 172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELC-----IQVEEQAKLLGKGL--PFKTALV 244 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~-----~Q~~~~~~~~~~~~--~~~~~~~ 244 (533)
..|+++.|+.|.|||....-.+ ..+.... .+....+.++..+-+.+-++ .+|.+.++.+.... .-++++.
T Consensus 39 k~n~lLVG~~GvGKTalv~~la-~ri~~~~--vp~~l~~~~i~~l~~~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlf 115 (268)
T d1r6bx2 39 KNNPLLVGESGVGKTAIAEGLA-WRIVQGD--VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 115 (268)
T ss_dssp SCEEEEECCTTSSHHHHHHHHH-HHHHHTC--SCGGGTTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHSSSSCEEEE
T ss_pred cCCcEEECCCCCcHHHHHHHHH-HHHHhCC--cccccccceeEEeeechHhccCccchhHHHHHHHHHHHhhccCCceEE
Confidence 4579999999999998644333 2232211 11122344565555544443 12444443332211 1223332
Q ss_pred Ec--------CCc--hHHHHHHHHc------CCcee-ecChHHHHHHHHcCCCCCCCeeEEEEeccch
Q 009500 245 VG--------GDA--MARQVYRIQQ------GVELI-VGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295 (533)
Q Consensus 245 ~g--------g~~--~~~~~~~l~~------~~~Ii-v~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~ 295 (533)
.. |.. .......+.+ ...+| -+||+.+..++..+.--...|..|-|+|-+.
T Consensus 116 iDeih~l~~~g~~~g~~~d~a~~Lkp~L~rg~i~vIgatT~eey~~~~e~d~al~rrF~~I~V~Eps~ 183 (268)
T d1r6bx2 116 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSI 183 (268)
T ss_dssp ETTTTTTTTSCCSSSCHHHHHHHHSSCSSSCCCEEEEEECHHHHHCCCCCTTSSGGGEEEEECCCCCH
T ss_pred ecchHHHhcCCCCCCccccHHHHhhHHHhCCCCeEEEeCCHHHHHHHHhhcHHHHhhhcccccCCCCH
Confidence 22 111 1122233322 23444 6899999887777666678899999999884
No 90
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=87.60 E-value=0.49 Score=41.19 Aligned_cols=17 Identities=29% Similarity=0.427 Sum_probs=15.0
Q ss_pred CcEEEEccCCCchhHHH
Q 009500 173 KSLLVSANTGSGKTASF 189 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ 189 (533)
.++|+.||+|+|||..+
T Consensus 36 ~~~L~~GPpGtGKT~lA 52 (238)
T d1in4a2 36 DHVLLAGPPGLGKTTLA 52 (238)
T ss_dssp CCEEEESSTTSSHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 47999999999999854
No 91
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.53 E-value=1.7 Score=35.19 Aligned_cols=75 Identities=12% Similarity=0.225 Sum_probs=55.2
Q ss_pred CCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHH----cCCceeecChHHHHHHHHcCCCCCCC
Q 009500 209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQ----QGVELIVGTPGRLIDLLMKHDIELDD 284 (533)
Q Consensus 209 ~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~----~~~~Iiv~Tp~~l~~~l~~~~~~l~~ 284 (533)
...++||.|.++.-+.++.+.+... ++.+..++|+.+..+....+. ....|+|+| +.+ ...+++.+
T Consensus 26 ~~~k~iIF~~s~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~l~~f~~~~~~iLv~T-----dv~-~rGiDi~~ 95 (162)
T d1fuka_ 26 SVTQAVIFCNTRRKVEELTTKLRND----KFTVSAIYSDLPQQERDTIMKEFRSGSSRILIST-----DLL-ARGIDVQQ 95 (162)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHT----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEE-----GGG-TTTCCCCS
T ss_pred CCCcEEEEEEEEchHHHHHHHHhhc----CceEEEeccCCchhhHHHHHHHHhhcccceeecc-----ccc-cccccCCC
Confidence 3456999999999999887776554 678888888877766544332 347899999 333 45678899
Q ss_pred eeEEEEecc
Q 009500 285 IRMFVLDEV 293 (533)
Q Consensus 285 i~~vVvDEa 293 (533)
+++||.=+.
T Consensus 96 v~~VI~~d~ 104 (162)
T d1fuka_ 96 VSLVINYDL 104 (162)
T ss_dssp CSEEEESSC
T ss_pred ceEEEEecc
Confidence 999887554
No 92
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=87.04 E-value=0.86 Score=36.91 Aligned_cols=51 Identities=18% Similarity=0.227 Sum_probs=35.4
Q ss_pred CCCeeEEEEeccchhhhcc--hHHHHHHHHHhCCCCcEEEecc-cCcHHHHHHH
Q 009500 282 LDDIRMFVLDEVDCMLQRG--FRDQVMQIFRAISLPQILMYSA-TISQEVEKMS 332 (533)
Q Consensus 282 l~~i~~vVvDEah~~~~~~--~~~~i~~i~~~~~~~q~i~~SA-T~~~~~~~~~ 332 (533)
-..+++||+||+-...+.+ -...+..++..-+...-+.+|+ ..|+++.+++
T Consensus 92 ~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p~~L~e~A 145 (157)
T d1g5ta_ 92 DPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILDLA 145 (157)
T ss_dssp CTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHHHHHHC
T ss_pred cCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCCHHHHHhc
Confidence 3568999999999888777 3467777777765555555555 4677665553
No 93
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.72 E-value=2.5 Score=34.40 Aligned_cols=76 Identities=8% Similarity=0.095 Sum_probs=56.4
Q ss_pred CCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHH---H-cCCceeecChHHHHHHHHcCCCCCCC
Q 009500 209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRI---Q-QGVELIVGTPGRLIDLLMKHDIELDD 284 (533)
Q Consensus 209 ~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l---~-~~~~Iiv~Tp~~l~~~l~~~~~~l~~ 284 (533)
.+.++||.|.++.-+..+...+... ++.+..++|+.+.......+ . ...+|+|||. . ....+++.+
T Consensus 31 ~~~k~iVF~~~~~~~~~l~~~L~~~----g~~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td-----~-~~~Gid~~~ 100 (171)
T d1s2ma2 31 QINQAIIFCNSTNRVELLAKKITDL----GYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD-----L-LTRGIDIQA 100 (171)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHH----TCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESS-----C-SSSSCCCTT
T ss_pred CCCceEEEEeeeehhhHhHHhhhcc----cccccccccccchhhhhhhhhhcccCccccccchh-----H-hhhccccce
Confidence 4567999999999998888877766 67888888887765544333 2 3488999994 2 345678899
Q ss_pred eeEEEEeccc
Q 009500 285 IRMFVLDEVD 294 (533)
Q Consensus 285 i~~vVvDEah 294 (533)
+++||.=++.
T Consensus 101 v~~VI~~d~p 110 (171)
T d1s2ma2 101 VNVVINFDFP 110 (171)
T ss_dssp EEEEEESSCC
T ss_pred eEEEEecCCc
Confidence 9999976655
No 94
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=86.48 E-value=1.7 Score=36.68 Aligned_cols=74 Identities=12% Similarity=0.119 Sum_probs=52.5
Q ss_pred CCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHH---H-cCCceeecChHHHHHHHHcCCCCCCC
Q 009500 209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRI---Q-QGVELIVGTPGRLIDLLMKHDIELDD 284 (533)
Q Consensus 209 ~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l---~-~~~~Iiv~Tp~~l~~~l~~~~~~l~~ 284 (533)
.+.++||.++|+.-+..+...++.. ++.+..++|+.+.......+ . ...+|+|+|. . ....+++.+
T Consensus 29 ~~~~~IIF~~t~~~~~~l~~~l~~~----~~~~~~~h~~~~~~~r~~~~~~f~~g~~~ilvaTd-----~-~~~GiD~p~ 98 (200)
T d1oywa3 29 RGKSGIIYCNSRAKVEDTAARLQSK----GISAAAYHAGLENNVRADVQEKFQRDDLQIVVATV-----A-FGMGINKPN 98 (200)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEECT-----T-SCTTTCCTT
T ss_pred CCCCEEEEEeeehhhHHhhhhhccC----CceeEEecCCCcHHHHHHHHHHHhcccceEEEecc-----h-hhhccCCCC
Confidence 4557999999999988877766654 67888888887765543332 2 3488999993 2 235567888
Q ss_pred eeEEEEec
Q 009500 285 IRMFVLDE 292 (533)
Q Consensus 285 i~~vVvDE 292 (533)
+++||.=+
T Consensus 99 v~~VI~~~ 106 (200)
T d1oywa3 99 VRFVVHFD 106 (200)
T ss_dssp CCEEEESS
T ss_pred CCEEEECC
Confidence 98888533
No 95
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=86.17 E-value=0.15 Score=41.99 Aligned_cols=20 Identities=45% Similarity=0.674 Sum_probs=16.5
Q ss_pred hCCCcEEEEccCCCchhHHH
Q 009500 170 LSGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 170 ~~g~~vli~a~TGsGKT~~~ 189 (533)
+.|+-+++.|++|||||+.+
T Consensus 2 ~~g~iI~l~G~~GsGKSTia 21 (176)
T d1zp6a1 2 LGGNILLLSGHPGSGKSTIA 21 (176)
T ss_dssp CTTEEEEEEECTTSCHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHH
Confidence 35677889999999999954
No 96
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=85.18 E-value=5 Score=37.42 Aligned_cols=127 Identities=16% Similarity=0.087 Sum_probs=62.0
Q ss_pred HHHHHh--CCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHH-----HHHHHHHHHhcC-
Q 009500 165 AIPSAL--SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCI-----QVEEQAKLLGKG- 236 (533)
Q Consensus 165 ~i~~i~--~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~-----Q~~~~~~~~~~~- 236 (533)
++..+. ...|.++.|+.|.|||....-.+. .+.... .+..-.+.+++-+-+.+-++- ++.+.++.+...
T Consensus 34 ~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~-~i~~~~--vp~~l~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~ 110 (387)
T d1qvra2 34 VIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQ-RIVKGD--VPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEV 110 (387)
T ss_dssp HHHHHHCSSCCCCEEEECTTSCHHHHHHHHHH-HHHHTC--SCTTSTTCEEEEECC-----------CHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCeEECCCCCCHHHHHHHHHH-HHHhCC--CCHHHcCceEEEeeHhhhhcccCcchhHHHHHHHHHHHh
Confidence 344444 345799999999999986443332 232211 112234456666666555542 344444443221
Q ss_pred --CCCeEEEEEc-------------CCchHHHHHH-HHc-CCcee-ecChHHHHHHHHcCCCCCCCeeEEEEeccch
Q 009500 237 --LPFKTALVVG-------------GDAMARQVYR-IQQ-GVELI-VGTPGRLIDLLMKHDIELDDIRMFVLDEVDC 295 (533)
Q Consensus 237 --~~~~~~~~~g-------------g~~~~~~~~~-l~~-~~~Ii-v~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~ 295 (533)
....+++... +.+..+.+.. +.. ...+| -+||+.+.. +.+..--..+|..|-|+|-+.
T Consensus 111 ~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~~ey~~-~e~d~al~rrF~~v~v~ep~~ 186 (387)
T d1qvra2 111 VQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTV 186 (387)
T ss_dssp HTTCSSEEEEECCC-------------------HHHHHTTCCCEEEEECHHHHHH-HTTCTTTCSCCCCEEECCCCH
T ss_pred ccCCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhCCCcceeeecCHHHHHH-hcccHHHHHhcccccCCCCcH
Confidence 1222322211 1111121111 222 24544 689999865 566655567899999999884
No 97
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=85.18 E-value=0.24 Score=40.64 Aligned_cols=18 Identities=33% Similarity=0.661 Sum_probs=15.5
Q ss_pred CCcEEEEccCCCchhHHH
Q 009500 172 GKSLLVSANTGSGKTASF 189 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~ 189 (533)
+.++++.|++|||||+.+
T Consensus 5 ~~~I~i~G~~GsGKTT~~ 22 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMA 22 (174)
T ss_dssp SCEEEEECSTTSSHHHHH
T ss_pred CCEEEEEeCCCCCHHHHH
Confidence 457999999999999954
No 98
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=84.91 E-value=0.61 Score=41.10 Aligned_cols=17 Identities=24% Similarity=0.419 Sum_probs=14.9
Q ss_pred CcEEEEccCCCchhHHH
Q 009500 173 KSLLVSANTGSGKTASF 189 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ 189 (533)
.++++.||+|+|||.++
T Consensus 44 ~~lll~GppGtGKT~l~ 60 (276)
T d1fnna2 44 PRATLLGRPGTGKTVTL 60 (276)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CceEEECCCCCCHHHHH
Confidence 57999999999999753
No 99
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=84.34 E-value=0.2 Score=40.22 Aligned_cols=16 Identities=31% Similarity=0.357 Sum_probs=13.3
Q ss_pred cEEEEccCCCchhHHH
Q 009500 174 SLLVSANTGSGKTASF 189 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ 189 (533)
-++++|++|||||+.+
T Consensus 4 lIii~G~pGsGKTTla 19 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWA 19 (152)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3678999999999853
No 100
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=84.17 E-value=0.26 Score=40.31 Aligned_cols=18 Identities=28% Similarity=0.383 Sum_probs=15.3
Q ss_pred CcEEEEccCCCchhHHHH
Q 009500 173 KSLLVSANTGSGKTASFL 190 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~l 190 (533)
.++++.|++|||||+.+.
T Consensus 5 ~~I~i~G~pGsGKTTia~ 22 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGK 22 (173)
T ss_dssp CCEEEECSTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 468999999999998654
No 101
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.82 E-value=0.94 Score=43.65 Aligned_cols=61 Identities=15% Similarity=0.126 Sum_probs=37.8
Q ss_pred CCcEEEEccCCCchhHHHHHHHHHHHHhhhhcc--cCCCCCceEEEEcccHHHHHHHHHHHHH
Q 009500 172 GKSLLVSANTGSGKTASFLVPVISQCANIRLHH--SQNQKNPLAMVLTPTRELCIQVEEQAKL 232 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~--~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~ 232 (533)
...+||.|..|||||.+..--++..+....... ...-....+|+|+=|+.-|..+.+.+..
T Consensus 16 ~g~~lv~A~AGsGKT~~l~~r~~~ll~~~~~~~~~~~~~~~~~IL~lTFT~kAA~Emk~RI~~ 78 (485)
T d1w36b1 16 QGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRS 78 (485)
T ss_dssp SSCEEEECCTTSCHHHHHHHHHHHHHTTCSSSSSCSSCCCGGGEEEEESCHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCchHHHHHHHHHHHHHHhhCcccccccCCCCcccEeEeccHHHHHHHHHHHHHH
Confidence 346899999999999875555555444321100 0001123599999998887776665433
No 102
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=83.39 E-value=0.29 Score=39.91 Aligned_cols=16 Identities=19% Similarity=0.495 Sum_probs=13.8
Q ss_pred cEEEEccCCCchhHHH
Q 009500 174 SLLVSANTGSGKTASF 189 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ 189 (533)
-+++.|++|||||+.+
T Consensus 4 lI~i~G~~GsGKTTva 19 (176)
T d2bdta1 4 LYIITGPAGVGKSTTC 19 (176)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4788999999999864
No 103
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=83.34 E-value=0.31 Score=39.90 Aligned_cols=19 Identities=11% Similarity=0.422 Sum_probs=15.8
Q ss_pred CCCcEEEEccCCCchhHHH
Q 009500 171 SGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~ 189 (533)
+.+=+++.|++|||||+.+
T Consensus 2 ~~kiI~l~G~~GsGKsTva 20 (178)
T d1qhxa_ 2 TTRMIILNGGSSAGKSGIV 20 (178)
T ss_dssp CCCEEEEECCTTSSHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 4566888999999999864
No 104
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=83.15 E-value=0.31 Score=42.64 Aligned_cols=17 Identities=35% Similarity=0.407 Sum_probs=15.0
Q ss_pred CcEEEEccCCCchhHHH
Q 009500 173 KSLLVSANTGSGKTASF 189 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ 189 (533)
.++|+.||+|+|||..+
T Consensus 36 ~~~Ll~GPpG~GKTtla 52 (239)
T d1ixsb2 36 EHLLLFGPPGLGKTTLA 52 (239)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 47999999999999854
No 105
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=82.33 E-value=0.62 Score=41.56 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=26.3
Q ss_pred hCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcc
Q 009500 170 LSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTP 218 (533)
Q Consensus 170 ~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~P 218 (533)
..|.-+++.|+||+|||...+ -+..++.. ..+.+++|+..
T Consensus 33 ~~G~l~vi~G~~G~GKT~~~~-~la~~~a~--------~~g~~v~~~s~ 72 (277)
T d1cr2a_ 33 RGGEVIMVTSGSGMGKSTFVR-QQALQWGT--------AMGKKVGLAML 72 (277)
T ss_dssp CTTCEEEEECSTTSSHHHHHH-HHHHHHHH--------TSCCCEEEEES
T ss_pred CCCeEEEEEeCCCCCHHHHHH-HHHHhhhh--------hcccceeEeee
Confidence 356778999999999997433 33333322 23556888874
No 106
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.21 E-value=3 Score=33.87 Aligned_cols=75 Identities=11% Similarity=0.241 Sum_probs=53.7
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHH---Hc-CCceeecChHHHHHHHHcCCCCCCCe
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRI---QQ-GVELIVGTPGRLIDLLMKHDIELDDI 285 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l---~~-~~~Iiv~Tp~~l~~~l~~~~~~l~~i 285 (533)
..++||.|+++.-+..+.+.+.+. ++.+..++|+.+..++...+ .. ...|+|+| +.+ ...+++..+
T Consensus 27 ~~k~iIF~~~~~~~~~l~~~L~~~----~~~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T-----~~~-~~Gid~~~~ 96 (168)
T d1t5ia_ 27 FNQVVIFVKSVQRCIALAQLLVEQ----NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVAT-----NLF-GRGMDIERV 96 (168)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEES-----SCC-STTCCGGGC
T ss_pred CCeEEEEEeeeecchhhhhhhccc----cccccccccccchhhhhhhhhhhccccceeeecc-----ccc-cchhhcccc
Confidence 456999999999988887777664 67888889887766554433 33 47899999 222 345678888
Q ss_pred eEEEEeccc
Q 009500 286 RMFVLDEVD 294 (533)
Q Consensus 286 ~~vVvDEah 294 (533)
.+||.=+.-
T Consensus 97 ~~vi~~~~p 105 (168)
T d1t5ia_ 97 NIAFNYDMP 105 (168)
T ss_dssp SEEEESSCC
T ss_pred hhhhhhhcc
Confidence 888775543
No 107
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=82.21 E-value=2.5 Score=35.69 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=55.9
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHHh---hcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEec-----cc-cccCCCC
Q 009500 379 HFTPPAVVYVGSRLGADLLSNAISV---TTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATG-----IL-GRGVELL 449 (533)
Q Consensus 379 ~~~~~~lIF~~s~~~~~~l~~~l~~---~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~-----~~-~~Gldi~ 449 (533)
..+.++||.|+++..|..+...+.. ..+..+..++|+.+..++...++ ..+|||+|+ .+ ...+++.
T Consensus 70 ~~~~~~lil~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l~-----~~~IlV~TP~~l~~~l~~~~~~~~ 144 (208)
T d1hv8a1 70 NNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK-----NANIVVGTPGRILDHINRGTLNLK 144 (208)
T ss_dssp SSSCCEEEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHHH-----TCSEEEECHHHHHHHHHTTCSCTT
T ss_pred ccCcceEEEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhcC-----CCCEEEEChHHHHHHHHcCCCCcc
Confidence 4456899999999999988777652 45678889999988776555442 368999995 22 4467888
Q ss_pred CccEEEEcC
Q 009500 450 GVRQVIIFD 458 (533)
Q Consensus 450 ~v~~VI~~~ 458 (533)
+++++|.-.
T Consensus 145 ~l~~lViDE 153 (208)
T d1hv8a1 145 NVKYFILDE 153 (208)
T ss_dssp SCCEEEEET
T ss_pred cCcEEEEEC
Confidence 999988743
No 108
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=82.20 E-value=0.25 Score=40.81 Aligned_cols=17 Identities=24% Similarity=0.376 Sum_probs=14.8
Q ss_pred CcEEEEccCCCchhHHH
Q 009500 173 KSLLVSANTGSGKTASF 189 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ 189 (533)
+.+++.|++|+|||+.+
T Consensus 8 K~I~i~G~~GsGKTTla 24 (192)
T d1lw7a2 8 KTVAILGGESSGKSVLV 24 (192)
T ss_dssp EEEEEECCTTSHHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 57999999999999843
No 109
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=81.79 E-value=0.29 Score=43.62 Aligned_cols=52 Identities=17% Similarity=0.198 Sum_probs=29.1
Q ss_pred cCcccCCCCHHHHHHHHHc--CCCCCCHHHHHHHHHHhCCCcEEEEccCCCchhHHH
Q 009500 135 LSFSSCSLSQKLLQNIEAA--GYDMPTPVQMQAIPSALSGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 135 ~~f~~~~l~~~l~~~l~~~--g~~~p~~~Q~~~i~~i~~g~~vli~a~TGsGKT~~~ 189 (533)
.+|++.+-.+...+.|.+. -+..|..+|... +-..+.+|+.||+|+|||+.+
T Consensus 9 ~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g---~~~~~~iLL~GppGtGKT~la 62 (256)
T d1lv7a_ 9 TTFADVAGCDEAKEEVAELVEYLREPSRFQKLG---GKIPKGVLMVGPPGTGKTLLA 62 (256)
T ss_dssp CCGGGSCSCHHHHHHTHHHHHHHHCGGGC--------CCCCEEEEECCTTSCHHHHH
T ss_pred CCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcC---CCCCCeEEeeCCCCCCccHHH
Confidence 4788877666666655432 011121122111 112467999999999999853
No 110
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.73 E-value=3.1 Score=33.82 Aligned_cols=74 Identities=9% Similarity=0.200 Sum_probs=54.6
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHH---H-cCCceeecChHHHHHHHHcCCCCCCCe
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRI---Q-QGVELIVGTPGRLIDLLMKHDIELDDI 285 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l---~-~~~~Iiv~Tp~~l~~~l~~~~~~l~~i 285 (533)
+.++||.|.++.-+..+...++.. ++.+..++|+.+..+....+ + ...+|+||| +.+ ...+++.++
T Consensus 34 ~~k~iiF~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~r~~~~~~fk~g~~~iLv~T-----d~~-~rGiDi~~v 103 (168)
T d2j0sa2 34 ITQAVIFCNTKRKVDWLTEKMREA----NFTVSSMHGDMPQKERESIMKEFRSGASRVLIST-----DVW-ARGLDVPQV 103 (168)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHT----TCCCEEECTTSCHHHHHHHHHHHHHTSSCEEEEC-----GGG-SSSCCCTTE
T ss_pred CCceEEEeeeHHHHHHHHHHhhhc----ccchhhhhhhhhHHHHHHHHHHHhcCCccEEecc-----chh-cccccccCc
Confidence 457999999999999887777665 56778888887766654333 2 348999999 444 456789999
Q ss_pred eEEEEecc
Q 009500 286 RMFVLDEV 293 (533)
Q Consensus 286 ~~vVvDEa 293 (533)
++||.=++
T Consensus 104 ~~VIn~d~ 111 (168)
T d2j0sa2 104 SLIINYDL 111 (168)
T ss_dssp EEEEESSC
T ss_pred ceEEEecC
Confidence 99886444
No 111
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=81.52 E-value=0.76 Score=40.80 Aligned_cols=66 Identities=17% Similarity=0.153 Sum_probs=35.7
Q ss_pred HHhCCCcEEEEccCCCchhHHHHHHHHHHHHh-hhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhc
Q 009500 168 SALSGKSLLVSANTGSGKTASFLVPVISQCAN-IRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235 (533)
Q Consensus 168 ~i~~g~~vli~a~TGsGKT~~~llp~l~~l~~-~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~ 235 (533)
-++.|.-+++.|++|+|||..++-.++ ++.. ..........+.+++|+.-- .-..++...+..+..
T Consensus 25 G~~pg~~~~i~G~~G~GKS~l~l~la~-~ia~g~~~~~~~~~~~~~vl~~~~E-~~~~~~~~Rl~~~~~ 91 (274)
T d1nlfa_ 25 NMVAGTVGALVSPGGAGKSMLALQLAA-QIAGGPDLLEVGELPTGPVIYLPAE-DPPTAIHHRLHALGA 91 (274)
T ss_dssp TEETTSEEEEEESTTSSHHHHHHHHHH-HHHTCCCTTCCCCCCCCCEEEEESS-SCHHHHHHHHHHHHT
T ss_pred CccCCcEEEEEeCCCCCHHHHHHHHHH-HHHcCCCcccccccCCCceEEEecc-chHHHHHHHHHHHhh
Confidence 345677789999999999975444333 3332 11111112234457776632 223445555555544
No 112
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=81.03 E-value=0.44 Score=38.84 Aligned_cols=17 Identities=29% Similarity=0.395 Sum_probs=14.8
Q ss_pred CcEEEEccCCCchhHHH
Q 009500 173 KSLLVSANTGSGKTASF 189 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ 189 (533)
+++++.|++|+|||++.
T Consensus 1 k~I~liG~~GsGKsTi~ 17 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLA 17 (161)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CcEEEECCCCCCHHHHH
Confidence 57899999999999864
No 113
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=80.83 E-value=0.53 Score=37.38 Aligned_cols=67 Identities=16% Similarity=0.244 Sum_probs=48.6
Q ss_pred CCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEE
Q 009500 209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMF 288 (533)
Q Consensus 209 ~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~v 288 (533)
.+.++||.|+|+.-|+++.+.++.. ++.+..++++...... -....+++||| +.+.++ ++ .++++|
T Consensus 34 ~~~k~IVFc~t~~~ae~la~~L~~~----G~~~~~~H~~~~~~~~---~~~~~~vlvaT-----d~~~~G-iD-~~v~~V 99 (138)
T d1jr6a_ 34 KGGRHLIFCHSKKKCDELAAKLVAL----GINAVAYYRGLDVSVI---PTNGDVVVVAT-----DALMTG-FT-GDFDSV 99 (138)
T ss_dssp TTSCEEEECSCHHHHHHHHHHHHHH----TCEEEEECTTCCSCCC---TTSSCEEEEES-----SSSCSS-SC-CCBSEE
T ss_pred CCCCEEEEeCcHHHHHHHHHHHhcc----ccchhhhhccchhhhh---hhhhcceeehh-----HHHHhc-cc-cccceE
Confidence 3456999999999999998888776 6788888888765432 12458899999 444443 45 567776
Q ss_pred E
Q 009500 289 V 289 (533)
Q Consensus 289 V 289 (533)
|
T Consensus 100 i 100 (138)
T d1jr6a_ 100 I 100 (138)
T ss_dssp E
T ss_pred E
Confidence 5
No 114
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.63 E-value=4.5 Score=32.73 Aligned_cols=75 Identities=12% Similarity=0.150 Sum_probs=53.9
Q ss_pred CCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHH---H-cCCceeecChHHHHHHHHcCCCCCCC
Q 009500 209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRI---Q-QGVELIVGTPGRLIDLLMKHDIELDD 284 (533)
Q Consensus 209 ~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l---~-~~~~Iiv~Tp~~l~~~l~~~~~~l~~ 284 (533)
...++||.+.++.-+..+...+.+ .++.+..++|+.+...+...+ . ....++|+|. . ....+++.+
T Consensus 31 ~~~~~lIF~~~~~~~~~l~~~l~~----~~~~~~~~hg~~~~~~R~~~~~~F~~g~~~ilv~Td-----~-~~~Gid~~~ 100 (168)
T d2rb4a1 31 TIGQAIIFCQTRRNAKWLTVEMIQ----DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTN-----V-CARGIDVKQ 100 (168)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHT----TTCCEEEECSSCCHHHHHHHHHHHHTTSCSEEEECC-----S-CCTTTCCTT
T ss_pred CCCcEEEEcCHHHHHHHHHHHHHh----cCCcceecccchhhHHHHHHhhhhcCCceeeeechh-----h-hhhhhcccc
Confidence 456799999999998887765554 467888899988766644333 3 3488999993 2 335577899
Q ss_pred eeEEEEecc
Q 009500 285 IRMFVLDEV 293 (533)
Q Consensus 285 i~~vVvDEa 293 (533)
+.+||.=++
T Consensus 101 v~~Vi~yd~ 109 (168)
T d2rb4a1 101 VTIVVNFDL 109 (168)
T ss_dssp EEEEEESSC
T ss_pred ccEEEeecC
Confidence 998886343
No 115
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=80.53 E-value=0.29 Score=40.21 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=16.8
Q ss_pred hCCCcEEEEccCCCchhHHHH
Q 009500 170 LSGKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 170 ~~g~~vli~a~TGsGKT~~~l 190 (533)
..|.-++++|.+|||||+++-
T Consensus 4 ~~g~~I~l~G~~GsGKTTia~ 24 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGKDAIAR 24 (183)
T ss_dssp TCCEEEEEECSTTSSHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHH
Confidence 356668899999999998653
No 116
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=80.05 E-value=0.5 Score=39.55 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=16.4
Q ss_pred CCcEEEEccCCCchhHHHHH
Q 009500 172 GKSLLVSANTGSGKTASFLV 191 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~ll 191 (533)
|-.+++.||+|||||+.+-+
T Consensus 3 ~~riil~G~pGSGKsT~a~~ 22 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAPK 22 (190)
T ss_dssp CCEEEEECCTTSSHHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHHH
Confidence 45688999999999997643
No 117
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=79.12 E-value=0.63 Score=38.13 Aligned_cols=14 Identities=29% Similarity=0.722 Sum_probs=12.9
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.||+|+|||+
T Consensus 2 ki~I~G~~G~GKST 15 (178)
T d1ye8a1 2 KIIITGEPGVGKTT 15 (178)
T ss_dssp EEEEECCTTSSHHH
T ss_pred EEEEECCCCcHHHH
Confidence 47999999999998
No 118
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=79.04 E-value=0.49 Score=39.10 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=14.7
Q ss_pred cEEEEccCCCchhHHHH
Q 009500 174 SLLVSANTGSGKTASFL 190 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~l 190 (533)
++++.||+|||||+.+.
T Consensus 2 ~I~i~G~pGSGKsT~a~ 18 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAE 18 (182)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999999754
No 119
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.78 E-value=4.7 Score=34.35 Aligned_cols=72 Identities=13% Similarity=0.142 Sum_probs=54.3
Q ss_pred CCCEEEEEcCcccHHHHHHHHH---hhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEec------cccccCCCCCc
Q 009500 381 TPPAVVYVGSRLGADLLSNAIS---VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATG------ILGRGVELLGV 451 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~---~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~------~~~~Gldi~~v 451 (533)
..++||++++++-|..+++.+. ...++.+..+.|+.+..+....++ . ...|||+|+ .-...+++.++
T Consensus 85 ~~~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~---~-~~~Ilv~TPgrl~~~~~~~~~~~~~l 160 (222)
T d2j0sa1 85 ETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLD---Y-GQHVVAGTPGRVFDMIRRRSLRTRAI 160 (222)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHH---H-CCSEEEECHHHHHHHHHTTSSCCTTC
T ss_pred CceeEEecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhc---c-CCeEEeCCCCcHHhcccccccccccc
Confidence 4579999999999998887775 245678888999988766554443 2 368999996 22567788889
Q ss_pred cEEEE
Q 009500 452 RQVII 456 (533)
Q Consensus 452 ~~VI~ 456 (533)
+++|.
T Consensus 161 ~~lVl 165 (222)
T d2j0sa1 161 KMLVL 165 (222)
T ss_dssp CEEEE
T ss_pred eeeee
Confidence 99886
No 120
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=78.52 E-value=0.5 Score=41.81 Aligned_cols=16 Identities=38% Similarity=0.573 Sum_probs=13.9
Q ss_pred cEEEEccCCCchhHHH
Q 009500 174 SLLVSANTGSGKTASF 189 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ 189 (533)
.+|+.||+|+|||..+
T Consensus 34 ~ilL~GpPGtGKT~la 49 (273)
T d1gvnb_ 34 AFLLGGQPGSGKTSLR 49 (273)
T ss_dssp EEEEECCTTSCTHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4899999999999853
No 121
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=78.15 E-value=0.61 Score=38.21 Aligned_cols=19 Identities=16% Similarity=0.207 Sum_probs=15.8
Q ss_pred CcEEEEccCCCchhHHHHH
Q 009500 173 KSLLVSANTGSGKTASFLV 191 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ll 191 (533)
+.+++.|++|||||+++-+
T Consensus 3 ~~Iil~G~~GsGKSTia~~ 21 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRE 21 (170)
T ss_dssp CCEEEESCTTSSHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHH
Confidence 5688999999999986543
No 122
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.04 E-value=0.54 Score=41.25 Aligned_cols=41 Identities=20% Similarity=0.218 Sum_probs=23.8
Q ss_pred CCeeEEEEeccchhhhcc--hHHHHHHHHHhCCCCcEEEecccC
Q 009500 283 DDIRMFVLDEVDCMLQRG--FRDQVMQIFRAISLPQILMYSATI 324 (533)
Q Consensus 283 ~~i~~vVvDEah~~~~~~--~~~~i~~i~~~~~~~q~i~~SAT~ 324 (533)
....++++||+|.+.... +...+...... ....+++.+++.
T Consensus 122 ~~~~vi~ide~~~~~~~~~~~~~~~~~~~~~-~~~~ii~i~~~~ 164 (253)
T d1sxja2 122 GKHFVIIMDEVDGMSGGDRGGVGQLAQFCRK-TSTPLILICNER 164 (253)
T ss_dssp TTSEEEEECSGGGCCTTSTTHHHHHHHHHHH-CSSCEEEEESCT
T ss_pred ccceEEEeeeccccccchhhhhHHHhhhhcc-cccccccccccc
Confidence 346789999999876543 33333333333 344566665554
No 123
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=77.88 E-value=0.56 Score=39.18 Aligned_cols=18 Identities=22% Similarity=0.385 Sum_probs=15.2
Q ss_pred cEEEEccCCCchhHHHHH
Q 009500 174 SLLVSANTGSGKTASFLV 191 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ll 191 (533)
.+++.||+|||||+.+.+
T Consensus 5 ~I~i~GppGsGKsT~a~~ 22 (189)
T d1zaka1 5 KVMISGAPASGKGTQCEL 22 (189)
T ss_dssp CEEEEESTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 589999999999986543
No 124
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=77.77 E-value=0.99 Score=36.94 Aligned_cols=17 Identities=35% Similarity=0.470 Sum_probs=14.1
Q ss_pred CcEEEEccCCCchhHHH
Q 009500 173 KSLLVSANTGSGKTASF 189 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ 189 (533)
+-+++.|++|||||+..
T Consensus 2 kiI~i~G~~GsGKsT~~ 18 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSS 18 (190)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 45788999999999853
No 125
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.68 E-value=0.96 Score=38.06 Aligned_cols=20 Identities=20% Similarity=0.142 Sum_probs=16.4
Q ss_pred CCCcEEEEccCCCchhHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~l 190 (533)
.|+-+++.|++|+|||..++
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l 41 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICH 41 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHH
Confidence 45678999999999997543
No 126
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=77.49 E-value=0.47 Score=38.61 Aligned_cols=16 Identities=31% Similarity=0.399 Sum_probs=13.6
Q ss_pred EEEEccCCCchhHHHH
Q 009500 175 LLVSANTGSGKTASFL 190 (533)
Q Consensus 175 vli~a~TGsGKT~~~l 190 (533)
+++.|++|||||+.+-
T Consensus 9 ivl~G~~GsGKsT~a~ 24 (171)
T d1knqa_ 9 YVLMGVSGSGKSAVAS 24 (171)
T ss_dssp EEEECSTTSCHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 6789999999998644
No 127
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=77.47 E-value=0.99 Score=38.65 Aligned_cols=24 Identities=38% Similarity=0.455 Sum_probs=17.9
Q ss_pred CCCcEEEEccCCCchhHHHHHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFLVPVI 194 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp~l 194 (533)
.|.-+++.|++|+|||..++-.+.
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~ 48 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLY 48 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHH
Confidence 456789999999999975443333
No 128
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.31 E-value=1.3 Score=34.77 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=25.2
Q ss_pred EEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHH
Q 009500 175 LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRE 221 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~ 221 (533)
-++.||+.||||.- ++-.+.... ..+.+++++-|...
T Consensus 5 ~li~GpMfsGKTt~-Li~~~~~~~---------~~g~~v~~ikp~~D 41 (133)
T d1xbta1 5 QVILGPMFSGKSTE-LMRRVRRFQ---------IAQYKCLVIKYAKD 41 (133)
T ss_dssp EEEECCTTSCHHHH-HHHHHHHHH---------TTTCCEEEEEETTC
T ss_pred EEEEecccCHHHHH-HHHHHHHHH---------HcCCcEEEEecccc
Confidence 57899999999984 444443332 24566999988643
No 129
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=77.14 E-value=0.62 Score=38.62 Aligned_cols=18 Identities=17% Similarity=0.231 Sum_probs=14.9
Q ss_pred cEEEEccCCCchhHHHHH
Q 009500 174 SLLVSANTGSGKTASFLV 191 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ll 191 (533)
.+++.||+|||||+.+-+
T Consensus 2 ~I~i~G~pGSGKsT~a~~ 19 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADR 19 (182)
T ss_dssp EEEEECSTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 478999999999996543
No 130
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=77.09 E-value=0.97 Score=36.44 Aligned_cols=14 Identities=43% Similarity=0.553 Sum_probs=12.3
Q ss_pred EEEEccCCCchhHH
Q 009500 175 LLVSANTGSGKTAS 188 (533)
Q Consensus 175 vli~a~TGsGKT~~ 188 (533)
+.++|+.|||||+.
T Consensus 5 i~itG~~GSGKTTL 18 (170)
T d1np6a_ 5 LAFAAWSGTGKTTL 18 (170)
T ss_dssp EEEECCTTSCHHHH
T ss_pred EEEEcCCCCCHHHH
Confidence 57899999999983
No 131
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=77.02 E-value=0.61 Score=38.60 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=15.1
Q ss_pred cEEEEccCCCchhHHHHH
Q 009500 174 SLLVSANTGSGKTASFLV 191 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ll 191 (533)
++++.||+|||||+.+-.
T Consensus 2 ~I~i~G~pGsGKsT~a~~ 19 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVK 19 (181)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 578999999999996544
No 132
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=76.40 E-value=0.62 Score=38.46 Aligned_cols=17 Identities=12% Similarity=0.174 Sum_probs=14.5
Q ss_pred cEEEEccCCCchhHHHH
Q 009500 174 SLLVSANTGSGKTASFL 190 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~l 190 (533)
.+++.||+|||||+.+-
T Consensus 2 ~I~i~G~pGSGKsT~~~ 18 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQ 18 (179)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47889999999999754
No 133
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=76.05 E-value=1.7 Score=39.14 Aligned_cols=69 Identities=9% Similarity=-0.003 Sum_probs=43.5
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEE
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vV 289 (533)
.++++|.+|+..-++++.+.+++. +.+++.++|......+........+|||+| ++...+ +++ ++.+||
T Consensus 36 ~g~~~~F~~s~~~~~~~a~~L~~~----g~~V~~l~~~~~~~e~~~~~~~~~~~~~~t-----~~~~~~-~~~-~~~~vi 104 (299)
T d1yksa2 36 KRPTAWFLPSIRAANVMAASLRKA----GKSVVVLNRKTFEREYPTIKQKKPDFILAT-----DIAEMG-ANL-CVERVL 104 (299)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHT----TCCEEECCSSSCC--------CCCSEEEES-----SSTTCC-TTC-CCSEEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhc----CCeEEEEcCcCcHhHHhhhhcCCcCEEEEe-----chhhhc-eec-CceEEE
Confidence 456999999999999888888764 567787777766554433333457899999 444433 445 355554
No 134
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=75.55 E-value=0.69 Score=38.73 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.1
Q ss_pred cEEEEccCCCchhHHHH
Q 009500 174 SLLVSANTGSGKTASFL 190 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~l 190 (533)
-+++.||+|||||+.+-
T Consensus 8 iI~i~G~pGSGKsT~a~ 24 (194)
T d1qf9a_ 8 VVFVLGGPGSGKGTQCA 24 (194)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 36889999999999654
No 135
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.38 E-value=0.73 Score=38.65 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=14.1
Q ss_pred EEEEccCCCchhHHHHH
Q 009500 175 LLVSANTGSGKTASFLV 191 (533)
Q Consensus 175 vli~a~TGsGKT~~~ll 191 (533)
+++.||+|||||+.+-+
T Consensus 11 I~i~GppGSGKsT~a~~ 27 (196)
T d1ukza_ 11 IFVLGGPGAGKGTQCEK 27 (196)
T ss_dssp EEEECSTTSSHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 78899999999986543
No 136
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.70 E-value=0.63 Score=38.43 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=12.9
Q ss_pred cEEEEccCCCchhHH
Q 009500 174 SLLVSANTGSGKTAS 188 (533)
Q Consensus 174 ~vli~a~TGsGKT~~ 188 (533)
=+|++|++|||||+.
T Consensus 16 liil~G~pGsGKST~ 30 (172)
T d1yj5a2 16 VVVAVGFPGAGKSTF 30 (172)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 378899999999984
No 137
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=74.65 E-value=0.77 Score=38.49 Aligned_cols=19 Identities=21% Similarity=0.134 Sum_probs=15.5
Q ss_pred CcEEEEccCCCchhHHHHH
Q 009500 173 KSLLVSANTGSGKTASFLV 191 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ll 191 (533)
-.+++.||+|||||+.+..
T Consensus 7 mrIiliG~PGSGKtT~a~~ 25 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSR 25 (189)
T ss_dssp CEEEEECCTTSSHHHHHHH
T ss_pred eeEEEECCCCCCHHHHHHH
Confidence 3688999999999986543
No 138
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.64 E-value=1 Score=41.33 Aligned_cols=25 Identities=28% Similarity=0.478 Sum_probs=19.7
Q ss_pred HHHHHhCCCc--EEEEccCCCchhHHH
Q 009500 165 AIPSALSGKS--LLVSANTGSGKTASF 189 (533)
Q Consensus 165 ~i~~i~~g~~--vli~a~TGsGKT~~~ 189 (533)
.++.++.|.+ +++.|+||||||...
T Consensus 67 lv~~~l~G~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 67 IVKDVLEGYNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp HHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHcCCCcceeeecccCCCCceec
Confidence 3556678887 577999999999863
No 139
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=74.03 E-value=1.3 Score=37.44 Aligned_cols=34 Identities=21% Similarity=0.132 Sum_probs=21.5
Q ss_pred CcEEEEcc-CCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEE
Q 009500 173 KSLLVSAN-TGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVL 216 (533)
Q Consensus 173 ~~vli~a~-TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil 216 (533)
+.++|++- ||.|||++.+..+. .+. ..|.+++++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~--aLa--------~~G~rVl~i 36 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQ--AAK--------AAGYRTAGY 36 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHH--HHH--------HTTCCEEEE
T ss_pred ceEEEEECCCCccHHHHHHHHHH--HHH--------HCCCeEEEE
Confidence 45677776 79999987654333 222 246667776
No 140
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=73.45 E-value=1.8 Score=34.20 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=24.7
Q ss_pred EEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHH
Q 009500 175 LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRE 221 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~ 221 (533)
-++.||+.||||.- ++-.+.+.. ..+.+++++-|...
T Consensus 10 ~lI~GpMfSGKTte-Li~~~~~~~---------~~g~~vl~i~~~~D 46 (141)
T d1xx6a1 10 EVIVGPMYSGKSEE-LIRRIRRAK---------IAKQKIQVFKPEID 46 (141)
T ss_dssp EEEECSTTSSHHHH-HHHHHHHHH---------HTTCCEEEEEEC--
T ss_pred EEEEeccccHHHHH-HHHHHHHhh---------hcCCcEEEEEeccc
Confidence 58899999999985 444443332 23566999999743
No 141
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.41 E-value=0.88 Score=37.99 Aligned_cols=16 Identities=25% Similarity=0.445 Sum_probs=13.9
Q ss_pred EEEEccCCCchhHHHH
Q 009500 175 LLVSANTGSGKTASFL 190 (533)
Q Consensus 175 vli~a~TGsGKT~~~l 190 (533)
+++.||+|||||+.+-
T Consensus 4 I~i~GppGSGKsT~a~ 19 (194)
T d1teva_ 4 VFVLGGPGAGKGTQCA 19 (194)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 6889999999999754
No 142
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.11 E-value=1.1 Score=38.66 Aligned_cols=20 Identities=15% Similarity=0.124 Sum_probs=16.5
Q ss_pred CCCcEEEEccCCCchhHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~l 190 (533)
.|+-+++.|++|+|||...+
T Consensus 33 ~G~~~li~G~pGsGKT~l~l 52 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCH 52 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHH
Confidence 56779999999999997543
No 143
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.04 E-value=0.92 Score=37.47 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=14.8
Q ss_pred cEEEEccCCCchhHHHHH
Q 009500 174 SLLVSANTGSGKTASFLV 191 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ll 191 (533)
.+++.||+|||||+.+-.
T Consensus 4 rIvl~G~pGSGKtT~a~~ 21 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPN 21 (180)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 578899999999996543
No 144
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=72.57 E-value=1.1 Score=37.52 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=16.8
Q ss_pred hCCCcEEEEccCCCchhHHHH
Q 009500 170 LSGKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 170 ~~g~~vli~a~TGsGKT~~~l 190 (533)
...+-+++.||+|||||+.+-
T Consensus 6 ~~~~iI~l~G~pGSGKsT~a~ 26 (194)
T d3adka_ 6 KKSKIIFVVGGPGSGKGTQCE 26 (194)
T ss_dssp HTSCEEEEEECTTSSHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHH
Confidence 345668899999999998654
No 145
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.18 E-value=0.5 Score=39.38 Aligned_cols=19 Identities=26% Similarity=0.497 Sum_probs=14.9
Q ss_pred CCcEEEEccCCCchhHHHH
Q 009500 172 GKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~l 190 (533)
|.-++++|++|||||+.+-
T Consensus 19 g~vI~L~G~pGSGKTTiAk 37 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSM 37 (195)
T ss_dssp CEEEEEESSCHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHH
Confidence 3456789999999998654
No 146
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.66 E-value=1.1 Score=37.22 Aligned_cols=16 Identities=25% Similarity=0.667 Sum_probs=14.2
Q ss_pred CcEEEEccCCCchhHH
Q 009500 173 KSLLVSANTGSGKTAS 188 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~ 188 (533)
|-++++||+|+|||..
T Consensus 2 rpIvl~GpsG~GK~tl 17 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTL 17 (186)
T ss_dssp CCEEEECCTTSSHHHH
T ss_pred CeEEEECCCCCCHHHH
Confidence 5689999999999984
No 147
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=71.42 E-value=1.1 Score=36.31 Aligned_cols=18 Identities=22% Similarity=0.161 Sum_probs=14.7
Q ss_pred cEEEEccCCCchhHHHHH
Q 009500 174 SLLVSANTGSGKTASFLV 191 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ll 191 (533)
++++.|++|+|||++.-+
T Consensus 3 ~IvliG~~G~GKSTig~~ 20 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRR 20 (165)
T ss_dssp SEEEECSTTSSHHHHHHH
T ss_pred cEEEECCCCCCHHHHHHH
Confidence 478889999999986543
No 148
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=71.39 E-value=1.4 Score=37.80 Aligned_cols=26 Identities=23% Similarity=0.176 Sum_probs=19.3
Q ss_pred CCCcEEEEccCCCchhHHHHHHHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFLVPVISQ 196 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp~l~~ 196 (533)
.|+-+++.|++|+|||..++-.+.+.
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 45678999999999998655444443
No 149
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=71.34 E-value=1.8 Score=35.41 Aligned_cols=15 Identities=27% Similarity=0.437 Sum_probs=12.5
Q ss_pred EEEEccCCCchhHHH
Q 009500 175 LLVSANTGSGKTASF 189 (533)
Q Consensus 175 vli~a~TGsGKT~~~ 189 (533)
+++.|+.|||||+..
T Consensus 4 ivi~G~~GsGKTT~~ 18 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVL 18 (194)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 467899999999854
No 150
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=70.51 E-value=1.4 Score=41.15 Aligned_cols=24 Identities=29% Similarity=0.517 Sum_probs=18.5
Q ss_pred HHHHhCCCc--EEEEccCCCchhHHH
Q 009500 166 IPSALSGKS--LLVSANTGSGKTASF 189 (533)
Q Consensus 166 i~~i~~g~~--vli~a~TGsGKT~~~ 189 (533)
+..++.|.+ +++.|+||||||...
T Consensus 106 v~~~l~G~n~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 106 VQTIFEGGKATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp HHHHHTTCEEEEEEEESTTSSHHHHH
T ss_pred HHHHHhccCceEEeeccCCCCCceee
Confidence 455668887 466799999999864
No 151
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=70.44 E-value=0.75 Score=42.40 Aligned_cols=18 Identities=28% Similarity=0.468 Sum_probs=15.8
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.+.++|+.|++|+|||+.
T Consensus 27 ~~h~vLl~G~pG~GKT~l 44 (333)
T d1g8pa_ 27 GIGGVLVFGDRGTGKSTA 44 (333)
T ss_dssp GGCCEEEECCGGGCTTHH
T ss_pred CCCeEEEECCCCccHHHH
Confidence 457899999999999984
No 152
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=70.02 E-value=1.1 Score=38.87 Aligned_cols=20 Identities=30% Similarity=0.145 Sum_probs=16.5
Q ss_pred CCCcEEEEccCCCchhHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~l 190 (533)
.|+-++|.|++|+|||+.++
T Consensus 35 ~G~~~li~G~pGsGKT~~~l 54 (254)
T d1pzna2 35 TQAITEVFGEFGSGKTQLAH 54 (254)
T ss_dssp SSEEEEEEESTTSSHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHH
Confidence 55678999999999998543
No 153
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=69.64 E-value=0.95 Score=39.61 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=15.7
Q ss_pred CCCcEEEEccCCCchhH
Q 009500 171 SGKSLLVSANTGSGKTA 187 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~ 187 (533)
.|..+.++|++|||||+
T Consensus 28 ~Ge~vaIvG~sGsGKST 44 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKST 44 (241)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCCCHHH
Confidence 67889999999999998
No 154
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.32 E-value=1.3 Score=36.87 Aligned_cols=16 Identities=25% Similarity=0.611 Sum_probs=13.9
Q ss_pred CcEEEEccCCCchhHH
Q 009500 173 KSLLVSANTGSGKTAS 188 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~ 188 (533)
|-++++||+|+|||..
T Consensus 1 rpIvl~GPsGsGK~tl 16 (190)
T d1lvga_ 1 RPVVLSGPSGAGKSTL 16 (190)
T ss_dssp CCEEEECCTTSSHHHH
T ss_pred CeEEEECCCCCCHHHH
Confidence 3578999999999985
No 155
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=68.95 E-value=1.4 Score=36.37 Aligned_cols=17 Identities=24% Similarity=0.538 Sum_probs=14.8
Q ss_pred CCcEEEEccCCCchhHH
Q 009500 172 GKSLLVSANTGSGKTAS 188 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~ 188 (533)
|+=++++||.|+|||+.
T Consensus 2 G~iivl~GpsG~GK~tl 18 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTV 18 (182)
T ss_dssp CCEEEEECSTTSSHHHH
T ss_pred CeEEEEECCCCCCHHHH
Confidence 56688999999999985
No 156
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.94 E-value=0.99 Score=39.90 Aligned_cols=17 Identities=29% Similarity=0.497 Sum_probs=14.8
Q ss_pred CCcEEEEccCCCchhHH
Q 009500 172 GKSLLVSANTGSGKTAS 188 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~ 188 (533)
.+.+|+.||+|+|||+.
T Consensus 38 ~~giLL~GppGtGKT~l 54 (258)
T d1e32a2 38 PRGILLYGPPGTGKTLI 54 (258)
T ss_dssp CCEEEEECCTTSSHHHH
T ss_pred CceeEEecCCCCCchHH
Confidence 36799999999999974
No 157
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=68.90 E-value=1.6 Score=40.53 Aligned_cols=25 Identities=24% Similarity=0.515 Sum_probs=19.3
Q ss_pred HHHHHhCCCc--EEEEccCCCchhHHH
Q 009500 165 AIPSALSGKS--LLVSANTGSGKTASF 189 (533)
Q Consensus 165 ~i~~i~~g~~--vli~a~TGsGKT~~~ 189 (533)
++..++.|.+ +++.|+||||||...
T Consensus 71 lv~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 71 TVDDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp HHHHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHhhccCceeEEecccCCCCcceee
Confidence 4555678887 577899999999763
No 158
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.22 E-value=1 Score=39.58 Aligned_cols=17 Identities=29% Similarity=0.517 Sum_probs=15.7
Q ss_pred CCCcEEEEccCCCchhH
Q 009500 171 SGKSLLVSANTGSGKTA 187 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~ 187 (533)
.|.-+.+++|+|||||+
T Consensus 39 ~Ge~vaivG~sGsGKST 55 (251)
T d1jj7a_ 39 PGEVTALVGPNGSGKST 55 (251)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCCcHHH
Confidence 67889999999999998
No 159
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=67.74 E-value=1.5 Score=40.87 Aligned_cols=25 Identities=36% Similarity=0.561 Sum_probs=19.9
Q ss_pred HHHHHhCCCc--EEEEccCCCchhHHH
Q 009500 165 AIPSALSGKS--LLVSANTGSGKTASF 189 (533)
Q Consensus 165 ~i~~i~~g~~--vli~a~TGsGKT~~~ 189 (533)
.+..++.|.+ ++..|+||||||...
T Consensus 66 lv~~~l~G~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 66 LVQSAVDGYNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcCCceeeeccccCCCCccccc
Confidence 4667778887 577899999999863
No 160
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=67.49 E-value=2.9 Score=33.56 Aligned_cols=22 Identities=23% Similarity=0.212 Sum_probs=15.1
Q ss_pred EEEccCCCchhHHHHHHHHHHHH
Q 009500 176 LVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 176 li~a~TGsGKT~~~llp~l~~l~ 198 (533)
-|+|..|||||+. +--++..+.
T Consensus 5 ~I~G~~gSGKTTl-i~~l~~~L~ 26 (165)
T d1xjca_ 5 QVVGYKHSGKTTL-MEKWVAAAV 26 (165)
T ss_dssp EEECCTTSSHHHH-HHHHHHHHH
T ss_pred EEEeCCCCCHHHH-HHHHHHHHH
Confidence 4899999999983 333444444
No 161
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=67.41 E-value=1.8 Score=40.00 Aligned_cols=25 Identities=24% Similarity=0.511 Sum_probs=19.2
Q ss_pred HHHHHhCCCc--EEEEccCCCchhHHH
Q 009500 165 AIPSALSGKS--LLVSANTGSGKTASF 189 (533)
Q Consensus 165 ~i~~i~~g~~--vli~a~TGsGKT~~~ 189 (533)
.++.++.|.+ ++..|+||||||...
T Consensus 78 lv~~~l~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 78 MLQHAFEGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp HHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHhccCceeeeeccCCCCCceee
Confidence 3455678877 577999999999863
No 162
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=67.08 E-value=1.1 Score=37.13 Aligned_cols=14 Identities=29% Similarity=0.190 Sum_probs=11.8
Q ss_pred EEEccCCCchhHHH
Q 009500 176 LVSANTGSGKTASF 189 (533)
Q Consensus 176 li~a~TGsGKT~~~ 189 (533)
-|.|++|||||+.+
T Consensus 26 gI~G~~GSGKSTla 39 (198)
T d1rz3a_ 26 GIDGLSRSGKTTLA 39 (198)
T ss_dssp EEEECTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 37999999999854
No 163
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=67.07 E-value=1.7 Score=40.16 Aligned_cols=25 Identities=24% Similarity=0.485 Sum_probs=19.6
Q ss_pred HHHHHhCCCc--EEEEccCCCchhHHH
Q 009500 165 AIPSALSGKS--LLVSANTGSGKTASF 189 (533)
Q Consensus 165 ~i~~i~~g~~--vli~a~TGsGKT~~~ 189 (533)
.+..++.|.+ ++..|+||||||...
T Consensus 72 lv~~~l~G~n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 72 ILDEVIMGYNCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp HHHHHHTTCEEEEEEEECTTSSHHHHH
T ss_pred hHHHHhccCCceEEeeeeccccceEEe
Confidence 4566678887 567999999999863
No 164
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=66.84 E-value=2 Score=37.57 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=17.7
Q ss_pred HHhCCCcEEEEccCCCchhHHH
Q 009500 168 SALSGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 168 ~i~~g~~vli~a~TGsGKT~~~ 189 (533)
....+..++|.|++|+|||..+
T Consensus 19 ~a~~~~pvlI~Ge~GtGK~~~A 40 (247)
T d1ny5a2 19 ISCAECPVLITGESGVGKEVVA 40 (247)
T ss_dssp HTTCCSCEEEECSTTSSHHHHH
T ss_pred HhCCCCCEEEECCCCcCHHHHH
Confidence 3346778999999999999743
No 165
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=66.67 E-value=1.6 Score=40.70 Aligned_cols=26 Identities=42% Similarity=0.585 Sum_probs=20.7
Q ss_pred HHHHHHhCCCc--EEEEccCCCchhHHH
Q 009500 164 QAIPSALSGKS--LLVSANTGSGKTASF 189 (533)
Q Consensus 164 ~~i~~i~~g~~--vli~a~TGsGKT~~~ 189 (533)
..++.++.|.+ ++..|+||||||...
T Consensus 115 plv~~vl~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 115 PLIQSALDGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp HHHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHHhcccceeEEeeccCCCccceEe
Confidence 35667788887 577999999999763
No 166
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=66.41 E-value=15 Score=31.15 Aligned_cols=74 Identities=12% Similarity=0.084 Sum_probs=54.1
Q ss_pred CCCEEEEEcCcccHHHHHHHHH---hhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEecc------ccccCCCCCc
Q 009500 381 TPPAVVYVGSRLGADLLSNAIS---VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGI------LGRGVELLGV 451 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~---~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~------~~~Gldi~~v 451 (533)
..++||.+++++-|..+.+.+. ...++.+..+.|+....++.. ......+|||+|.- -...+++.++
T Consensus 98 ~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~ivV~TP~~l~~~~~~~~~~l~~v 173 (238)
T d1wrba1 98 YPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIR----EVQMGCHLLVATPGRLVDFIEKNKISLEFC 173 (238)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHH----HHSSCCSEEEECHHHHHHHHHTTSBCCTTC
T ss_pred CceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHh----hcccCCceeecCHHHHHhHHccCceecccc
Confidence 4579999999999998887664 345677888888877655433 23456899999982 2356788899
Q ss_pred cEEEEcC
Q 009500 452 RQVIIFD 458 (533)
Q Consensus 452 ~~VI~~~ 458 (533)
.++|.-.
T Consensus 174 ~~lViDE 180 (238)
T d1wrba1 174 KYIVLDE 180 (238)
T ss_dssp CEEEEET
T ss_pred ceeeeeh
Confidence 9988643
No 167
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.25 E-value=2.2 Score=36.81 Aligned_cols=22 Identities=18% Similarity=-0.112 Sum_probs=17.4
Q ss_pred CCCcEEEEccCCCchhHHHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFLVP 192 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp 192 (533)
.|+-+++.|++|+|||..++-.
T Consensus 36 ~G~~~~i~G~~GsGKT~lalq~ 57 (258)
T d1v5wa_ 36 SMAITEAFGEFRTGKTQLSHTL 57 (258)
T ss_dssp SSEEEEEECCTTCTHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHH
Confidence 5667899999999999854433
No 168
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=65.97 E-value=3.2 Score=36.51 Aligned_cols=25 Identities=24% Similarity=0.283 Sum_probs=18.5
Q ss_pred CCCcEEEEccCCCchhHHHHHHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFLVPVIS 195 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp~l~ 195 (533)
.|+-+.+.+++|+|||..++..+.+
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~ 77 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAA 77 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHH
T ss_pred CceEEEEecCCCcHHHHHHHHHHHH
Confidence 3456899999999999875544443
No 169
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=65.59 E-value=1.3 Score=38.35 Aligned_cols=23 Identities=26% Similarity=0.575 Sum_probs=18.0
Q ss_pred CCCcEEEEccCCCchhHHHHHHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFLVPVIS 195 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp~l~ 195 (533)
.|.-+.+.||+|||||+ ++-++.
T Consensus 30 ~Ge~~~iiG~sGsGKST--Ll~~i~ 52 (230)
T d1l2ta_ 30 EGEFVSIMGPSGSGKST--MLNIIG 52 (230)
T ss_dssp TTCEEEEECSTTSSHHH--HHHHHT
T ss_pred CCCEEEEECCCCCCcch--hhHhcc
Confidence 67778999999999997 344443
No 170
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=64.49 E-value=2.7 Score=39.02 Aligned_cols=19 Identities=26% Similarity=0.232 Sum_probs=15.4
Q ss_pred CCCcEEEEccCCCchhHHH
Q 009500 171 SGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~ 189 (533)
.++.+++.||+|+|||+.+
T Consensus 153 ~~~~~~~~g~~~~gk~~~~ 171 (362)
T d1svma_ 153 KKRYWLFKGPIDSGKTTLA 171 (362)
T ss_dssp TCCEEEEECSTTSSHHHHH
T ss_pred CcCeEEEECCCCCCHHHHH
Confidence 3456899999999999843
No 171
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=64.48 E-value=1.2 Score=39.20 Aligned_cols=18 Identities=33% Similarity=0.649 Sum_probs=16.1
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.|.-+.+.+|+|||||+.
T Consensus 40 ~Ge~iaivG~sGsGKSTL 57 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTI 57 (253)
T ss_dssp TTCEEEEEECTTSSHHHH
T ss_pred CCCEEEEECCCCChHHHH
Confidence 678899999999999983
No 172
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=64.44 E-value=2 Score=36.40 Aligned_cols=18 Identities=39% Similarity=0.634 Sum_probs=15.3
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
+|+=++++||+|+|||..
T Consensus 1 ~G~livi~GPSG~GK~tl 18 (205)
T d1s96a_ 1 QGTLYIVSAPSGAGKSSL 18 (205)
T ss_dssp CCCEEEEECCTTSCHHHH
T ss_pred CCeEEEEECCCCCCHHHH
Confidence 366688999999999984
No 173
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=63.99 E-value=1.8 Score=39.88 Aligned_cols=25 Identities=36% Similarity=0.581 Sum_probs=19.9
Q ss_pred HHHHHhCCCc--EEEEccCCCchhHHH
Q 009500 165 AIPSALSGKS--LLVSANTGSGKTASF 189 (533)
Q Consensus 165 ~i~~i~~g~~--vli~a~TGsGKT~~~ 189 (533)
.+..++.|.+ ++..|+||||||...
T Consensus 74 ~v~~~l~G~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 74 LVQSSLDGYNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp HHGGGGGTCCEEEEEECCTTSSHHHHH
T ss_pred hhcchhcccccceeeeeccCCcccccc
Confidence 5566778887 567999999999864
No 174
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.73 E-value=1.4 Score=37.23 Aligned_cols=14 Identities=43% Similarity=0.427 Sum_probs=11.7
Q ss_pred EEEccCCCchhHHH
Q 009500 176 LVSANTGSGKTASF 189 (533)
Q Consensus 176 li~a~TGsGKT~~~ 189 (533)
-|.|++|||||+.+
T Consensus 6 gI~G~~gSGKSTla 19 (213)
T d1uj2a_ 6 GVSGGTASGKSSVC 19 (213)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 46899999999854
No 175
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.63 E-value=15 Score=30.40 Aligned_cols=75 Identities=16% Similarity=0.156 Sum_probs=53.0
Q ss_pred CCCEEEEEcCcccHHHHHHHHHhhc----CCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEecc-----c-cccCCCCC
Q 009500 381 TPPAVVYVGSRLGADLLSNAISVTT----GMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGI-----L-GRGVELLG 450 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~~~~----~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~-----~-~~Gldi~~ 450 (533)
..+++|.+++++-+..+.+.+.... ......++|+.+...... .+.....+|||+|+- + ...+++.+
T Consensus 69 ~~~~lil~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~l~~~~~~ilI~TP~rl~~~~~~~~~~l~~ 145 (207)
T d1t6na_ 69 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE---VLKKNCPHIVVGTPGRILALARNKSLNLKH 145 (207)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHH---HHHHSCCSEEEECHHHHHHHHHTTSSCCTT
T ss_pred CceEEEEeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHH---HHHhcCCCEEEeCcchhhhhccCCceeccc
Confidence 4579999999999988888875322 245677788887554433 234467899999982 2 24578888
Q ss_pred ccEEEEcC
Q 009500 451 VRQVIIFD 458 (533)
Q Consensus 451 v~~VI~~~ 458 (533)
+.++|.-.
T Consensus 146 l~~lVlDE 153 (207)
T d1t6na_ 146 IKHFILDE 153 (207)
T ss_dssp CCEEEEES
T ss_pred cceeehhh
Confidence 98888644
No 176
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=63.49 E-value=1.8 Score=36.53 Aligned_cols=17 Identities=18% Similarity=0.360 Sum_probs=13.4
Q ss_pred EEEEccCCCchhHHHHH
Q 009500 175 LLVSANTGSGKTASFLV 191 (533)
Q Consensus 175 vli~a~TGsGKT~~~ll 191 (533)
+.|.||+|||||+.+-+
T Consensus 6 I~I~GppGSGKgT~ak~ 22 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCKA 22 (225)
T ss_dssp EEEECCTTSSHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 45679999999997543
No 177
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=63.35 E-value=13 Score=31.52 Aligned_cols=76 Identities=17% Similarity=0.194 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCcccHHHHHHHHHhh---cCC----eEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEec-ccccc-CCCCC
Q 009500 380 FTPPAVVYVGSRLGADLLSNAISVT---TGM----KALSIHGEKPMKERREIMRSFLVGEVPVIVATG-ILGRG-VELLG 450 (533)
Q Consensus 380 ~~~~~lIF~~s~~~~~~l~~~l~~~---~~~----~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~-~~~~G-ldi~~ 450 (533)
.+.++||.++++.-+...++.+++. .++ ....++++....++...+.... ..+|||+|. .+.+. .++..
T Consensus 85 ~~~rvliv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~Ilv~Tp~~l~~~~~~~~~ 162 (237)
T d1gkub1 85 KGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLR--NFKIVITTTQFLSKHYRELGH 162 (237)
T ss_dssp TSCCEEEEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGG--GCSEEEEEHHHHHHCSTTSCC
T ss_pred hcCeEEEEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhcccc--ccceeccChHHHHHhhhhcCC
Confidence 4568999999999998888877632 222 3556777777777766665433 467999996 33433 45667
Q ss_pred ccEEEEc
Q 009500 451 VRQVIIF 457 (533)
Q Consensus 451 v~~VI~~ 457 (533)
+++||.-
T Consensus 163 ~~~vVvD 169 (237)
T d1gkub1 163 FDFIFVD 169 (237)
T ss_dssp CSEEEES
T ss_pred CCEEEEE
Confidence 8888763
No 178
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.91 E-value=1.8 Score=35.75 Aligned_cols=17 Identities=24% Similarity=0.417 Sum_probs=14.5
Q ss_pred CCcEEEEccCCCchhHH
Q 009500 172 GKSLLVSANTGSGKTAS 188 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~ 188 (533)
.+-++++||+|+|||..
T Consensus 3 ~k~ivl~Gpsg~GK~tl 19 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRHI 19 (178)
T ss_dssp CCEEEEECCTTSSHHHH
T ss_pred CCcEEEECCCCCCHHHH
Confidence 35688999999999984
No 179
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=62.12 E-value=1.4 Score=38.39 Aligned_cols=17 Identities=18% Similarity=0.431 Sum_probs=15.2
Q ss_pred CCCcEEEEccCCCchhH
Q 009500 171 SGKSLLVSANTGSGKTA 187 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~ 187 (533)
.|.-+.+.+|+|||||+
T Consensus 27 ~Ge~vaivG~sGsGKST 43 (242)
T d1mv5a_ 27 PNSIIAFAGPSGGGKST 43 (242)
T ss_dssp TTEEEEEECCTTSSHHH
T ss_pred CCCEEEEECCCCCCHHH
Confidence 56778899999999998
No 180
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.80 E-value=1.9 Score=38.06 Aligned_cols=17 Identities=35% Similarity=0.460 Sum_probs=14.9
Q ss_pred CCcEEEEccCCCchhHH
Q 009500 172 GKSLLVSANTGSGKTAS 188 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~ 188 (533)
.+.+|+.||+|+|||+.
T Consensus 41 ~~giLL~Gp~GtGKT~l 57 (265)
T d1r7ra3 41 SKGVLFYGPPGCGKTLL 57 (265)
T ss_dssp CCEEEEBCCTTSSHHHH
T ss_pred CCeEEEECCCCCcchhH
Confidence 46799999999999984
No 181
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=60.02 E-value=1.8 Score=36.15 Aligned_cols=16 Identities=19% Similarity=0.138 Sum_probs=13.4
Q ss_pred EEEEccCCCchhHHHH
Q 009500 175 LLVSANTGSGKTASFL 190 (533)
Q Consensus 175 vli~a~TGsGKT~~~l 190 (533)
++++|.+|||||+.+-
T Consensus 5 i~l~GlpgsGKSTla~ 20 (213)
T d1bifa1 5 IVMVGLPARGKTYISK 20 (213)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 5779999999998653
No 182
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=59.86 E-value=2.3 Score=35.95 Aligned_cols=17 Identities=18% Similarity=0.346 Sum_probs=13.4
Q ss_pred EEEEccCCCchhHHHHH
Q 009500 175 LLVSANTGSGKTASFLV 191 (533)
Q Consensus 175 vli~a~TGsGKT~~~ll 191 (533)
+.|.||.|||||+.+-+
T Consensus 6 IaIdGp~GsGKgT~ak~ 22 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKI 22 (223)
T ss_dssp EEEECSSCSSHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 44669999999997654
No 183
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=58.90 E-value=12 Score=30.40 Aligned_cols=82 Identities=10% Similarity=0.126 Sum_probs=44.9
Q ss_pred hCCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEccc-HHHHHHHHHHHHHHhcCCCCeEEEEEcCC
Q 009500 170 LSGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPT-RELCIQVEEQAKLLGKGLPFKTALVVGGD 248 (533)
Q Consensus 170 ~~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Pt-r~L~~Q~~~~~~~~~~~~~~~~~~~~gg~ 248 (533)
+++++++|.+.=|+||+.++.+.. .+.+-++++.+ .+-+......++++....+..+.. ..-.
T Consensus 16 l~~k~vlIlGaGGaarai~~al~~---------------~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~ 79 (182)
T d1vi2a1 16 IKGKTMVLLGAGGASTAIGAQGAI---------------EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV-TDLA 79 (182)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH---------------TTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEE-EETT
T ss_pred cCCCEEEEECCcHHHHHHHHHHhh---------------cCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEe-eecc
Confidence 367899999998999887654332 23445555544 333344445555555444433322 2222
Q ss_pred chHHHHHHHHcCCceee-cCh
Q 009500 249 AMARQVYRIQQGVELIV-GTP 268 (533)
Q Consensus 249 ~~~~~~~~l~~~~~Iiv-~Tp 268 (533)
. ..........+++|| |||
T Consensus 80 ~-~~~~~~~~~~~diiIN~Tp 99 (182)
T d1vi2a1 80 D-QQAFAEALASADILTNGTK 99 (182)
T ss_dssp C-HHHHHHHHHTCSEEEECSS
T ss_pred c-ccchhhhhcccceeccccC
Confidence 2 223333445688888 776
No 184
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=58.63 E-value=6.2 Score=33.17 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=47.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHHHh---hcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEec------cccccCCCCC
Q 009500 380 FTPPAVVYVGSRLGADLLSNAISV---TTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATG------ILGRGVELLG 450 (533)
Q Consensus 380 ~~~~~lIF~~s~~~~~~l~~~l~~---~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~------~~~~Gldi~~ 450 (533)
.+..++|++++++.+..+...+.. .........+++.+..++...+ ...+|+|+|+ .-..++++.+
T Consensus 77 ~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~IvI~TP~~l~~~~~~~~~~l~~ 151 (212)
T d1qdea_ 77 KAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-----RDAQIVVGTPGRVFDNIQRRRFRTDK 151 (212)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHTTTSCCCEEEECC----------C-----TTCSEEEECHHHHHHHHHTTSSCCTT
T ss_pred CCcceEEEcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHHh-----cCCcEEEECCCccccccccCceecCc
Confidence 456899999999999888887752 3345566667765544443322 2468999996 2346788899
Q ss_pred ccEEEEcC
Q 009500 451 VRQVIIFD 458 (533)
Q Consensus 451 v~~VI~~~ 458 (533)
++++|.-.
T Consensus 152 l~~lVlDE 159 (212)
T d1qdea_ 152 IKMFILDE 159 (212)
T ss_dssp CCEEEEET
T ss_pred ceEEeehh
Confidence 99998743
No 185
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.58 E-value=16 Score=30.29 Aligned_cols=73 Identities=21% Similarity=0.168 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHHHhh----cCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEec------cccccCCCC
Q 009500 380 FTPPAVVYVGSRLGADLLSNAISVT----TGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATG------ILGRGVELL 449 (533)
Q Consensus 380 ~~~~~lIF~~s~~~~~~l~~~l~~~----~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~------~~~~Gldi~ 449 (533)
.+..+||.+++++-+..+...+... .+......+|+....++...+ .....|+|+|+ .-...+++.
T Consensus 70 ~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l----~~~~~ivv~TPgrl~~~~~~~~~~~~ 145 (206)
T d1veca_ 70 DNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRL----DDTVHVVIATPGRILDLIKKGVAKVD 145 (206)
T ss_dssp CSCCEEEECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHT----TSCCSEEEECHHHHHHHHHTTCSCCT
T ss_pred cCcceEEEeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHH----HhccCeEEeCCccccccccchhcccc
Confidence 4557999999999999888877522 245677788888766554443 36789999996 223457788
Q ss_pred CccEEEE
Q 009500 450 GVRQVII 456 (533)
Q Consensus 450 ~v~~VI~ 456 (533)
+++++|.
T Consensus 146 ~l~~lVl 152 (206)
T d1veca_ 146 HVQMIVL 152 (206)
T ss_dssp TCCEEEE
T ss_pred ccceEEE
Confidence 8888886
No 186
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=57.76 E-value=2.6 Score=36.38 Aligned_cols=17 Identities=24% Similarity=0.542 Sum_probs=15.1
Q ss_pred CCCcEEEEccCCCchhH
Q 009500 171 SGKSLLVSANTGSGKTA 187 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~ 187 (533)
.|.-+.+.+|.|||||+
T Consensus 25 ~Gei~~liGpsGsGKST 41 (232)
T d2awna2 25 EGEFVVFVGPSGCGKST 41 (232)
T ss_dssp TTCEEEEECCTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 56778899999999997
No 187
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=57.35 E-value=2.6 Score=38.32 Aligned_cols=16 Identities=44% Similarity=0.547 Sum_probs=13.7
Q ss_pred cEEEEccCCCchhHHH
Q 009500 174 SLLVSANTGSGKTASF 189 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ 189 (533)
.++++||||+|||..+
T Consensus 54 ~~lf~Gp~GvGKT~la 69 (315)
T d1r6bx3 54 SFLFAGPTGVGKTEVT 69 (315)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCcchhHHHH
Confidence 4788999999999754
No 188
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=56.59 E-value=2.6 Score=34.60 Aligned_cols=20 Identities=30% Similarity=0.531 Sum_probs=16.8
Q ss_pred CCCcEEEEccCCCchhHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~l 190 (533)
.|+-+++.++.|+|||..++
T Consensus 14 ~g~gvli~G~sG~GKS~lal 33 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECAL 33 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHH
Confidence 56779999999999997654
No 189
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=56.23 E-value=7.5 Score=33.40 Aligned_cols=18 Identities=22% Similarity=0.193 Sum_probs=15.1
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.++.+++.||.|+|||..
T Consensus 28 ~~~~i~i~G~~G~GKTsL 45 (283)
T d2fnaa2 28 RAPITLVLGLRRTGKSSI 45 (283)
T ss_dssp CSSEEEEEESTTSSHHHH
T ss_pred cCCEEEEEcCCCCcHHHH
Confidence 346789999999999974
No 190
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=56.11 E-value=5.5 Score=33.80 Aligned_cols=13 Identities=38% Similarity=0.667 Sum_probs=11.9
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|+.|||||+
T Consensus 3 i~v~G~~GsGKTT 15 (244)
T d1yrba1 3 VVFVGTAGSGKTT 15 (244)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEEcCCCCcHHH
Confidence 5789999999998
No 191
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=56.01 E-value=5.7 Score=35.70 Aligned_cols=15 Identities=13% Similarity=0.377 Sum_probs=12.3
Q ss_pred EEEEccCCCchhHHH
Q 009500 175 LLVSANTGSGKTASF 189 (533)
Q Consensus 175 vli~a~TGsGKT~~~ 189 (533)
+-|+|+.|||||+.+
T Consensus 83 IGIaG~sgSGKSTla 97 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTA 97 (308)
T ss_dssp EEEEECTTSSHHHHH
T ss_pred EEEeCCCCCCCcHHH
Confidence 457999999999854
No 192
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=55.69 E-value=6.8 Score=34.41 Aligned_cols=51 Identities=25% Similarity=0.296 Sum_probs=30.8
Q ss_pred CCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHh
Q 009500 171 SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLG 234 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~ 234 (533)
.|+=+.+.++.|+|||..++..+... . ..+..++|+-.-..+.. +++++++
T Consensus 59 ~g~i~e~~G~~~~GKT~l~l~~~~~~-q---------~~g~~~vyIDtE~~~~~---e~a~~~G 109 (269)
T d1mo6a1 59 RGRVIEIYGPESSGKTTVALHAVANA-Q---------AAGGVAAFIDAEHALDP---DYAKKLG 109 (269)
T ss_dssp SSSEEEEECSSSSSHHHHHHHHHHHH-H---------HTTCEEEEEESSCCCCH---HHHHHHT
T ss_pred cceeEEEecCCCcHHHHHHHHHHHHH-h---------cCCCEEEEEECCccCCH---HHHHHhC
Confidence 45678999999999998665444332 2 23556777654433422 3455553
No 193
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=55.23 E-value=26 Score=28.74 Aligned_cols=75 Identities=16% Similarity=0.132 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCcccHHHHHHHHH---hhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEecc------ccccCCCCC
Q 009500 380 FTPPAVVYVGSRLGADLLSNAIS---VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGI------LGRGVELLG 450 (533)
Q Consensus 380 ~~~~~lIF~~s~~~~~~l~~~l~---~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~------~~~Gldi~~ 450 (533)
.+...++.+++...+......+. ...++.+...+|+.........+ .....|||+|+- -...+++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l----~~~~~Ili~TP~~l~~~l~~~~~~l~~ 143 (206)
T d1s2ma1 68 NKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRL----NETVHILVGTPGRVLDLASRKVADLSD 143 (206)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHT----TSCCSEEEECHHHHHHHHHTTCSCCTT
T ss_pred ccccceeeccchhhhhhhhhhhhhcccccCeeEEeecCccchhhHHHHh----cccceEEEECCcccccccccceeeccc
Confidence 34578899999888876666553 35678899999999876655443 456899999972 235678888
Q ss_pred ccEEEEcC
Q 009500 451 VRQVIIFD 458 (533)
Q Consensus 451 v~~VI~~~ 458 (533)
++++|.-.
T Consensus 144 l~~lV~DE 151 (206)
T d1s2ma1 144 CSLFIMDE 151 (206)
T ss_dssp CCEEEEES
T ss_pred ceEEEeec
Confidence 99988643
No 194
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=54.83 E-value=3.1 Score=36.07 Aligned_cols=18 Identities=28% Similarity=0.612 Sum_probs=15.6
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.|.-+-+.||.|||||+.
T Consensus 28 ~Ge~~~liG~sGaGKSTl 45 (240)
T d1g2912 28 DGEFMILLGPSGCGKTTT 45 (240)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCChHHHH
Confidence 677788999999999973
No 195
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=54.66 E-value=3.1 Score=34.96 Aligned_cols=18 Identities=28% Similarity=0.388 Sum_probs=15.8
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.|+-+.+.||.|+|||+.
T Consensus 26 ~Gei~~l~G~NGsGKSTL 43 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTTL 43 (200)
T ss_dssp TTCCEEEECCTTSSHHHH
T ss_pred CCCEEEEECCCCChHHHH
Confidence 677788999999999983
No 196
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=54.63 E-value=3.1 Score=34.17 Aligned_cols=20 Identities=30% Similarity=0.629 Sum_probs=16.8
Q ss_pred CCCcEEEEccCCCchhHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~l 190 (533)
.|+-+++.|+.|+|||..++
T Consensus 13 ~g~gvl~~G~sG~GKStlal 32 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETAL 32 (176)
T ss_dssp TTEEEEEECCTTSCHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHH
Confidence 56779999999999998654
No 197
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=54.56 E-value=10 Score=33.46 Aligned_cols=26 Identities=27% Similarity=0.280 Sum_probs=22.4
Q ss_pred HHHHHHHh---CCCcEEEEccCCCchhHH
Q 009500 163 MQAIPSAL---SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 163 ~~~i~~i~---~g~~vli~a~TGsGKT~~ 188 (533)
.++|..++ .|+..+|.|+.|+|||..
T Consensus 31 ~r~ID~l~PigrGQr~~I~g~~g~GKT~l 59 (289)
T d1xpua3 31 ARVLDLASPIGRGQRGLIVAPPKAGKTML 59 (289)
T ss_dssp HHHHHHHSCCBTTCEEEEEECSSSSHHHH
T ss_pred ceeeeecccccCCCeeeEeCCCCCCHHHH
Confidence 36777776 899999999999999985
No 198
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=54.46 E-value=3.1 Score=35.97 Aligned_cols=17 Identities=35% Similarity=0.622 Sum_probs=15.2
Q ss_pred CCCcEEEEccCCCchhH
Q 009500 171 SGKSLLVSANTGSGKTA 187 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~ 187 (533)
.|.-+-+.+|.|+|||+
T Consensus 31 ~Ge~~~liGpsGaGKST 47 (239)
T d1v43a3 31 DGEFLVLLGPSGCGKTT 47 (239)
T ss_dssp TTCEEEEECCTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 56778899999999998
No 199
>d2exfa1 g.40.1.1 (A:12-53) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
Probab=54.40 E-value=2.5 Score=25.57 Aligned_cols=14 Identities=29% Similarity=0.767 Sum_probs=10.1
Q ss_pred CCeeeeeccccccc
Q 009500 36 EPKCVICGRYGEYI 49 (533)
Q Consensus 36 ~~~c~~c~~~~~~~ 49 (533)
...|..||..||.+
T Consensus 22 ~~~C~~Cg~~GH~~ 35 (42)
T d2exfa1 22 KKGCWKCGKEGHQM 35 (42)
T ss_dssp CSSCSSSCCSSSCT
T ss_pred cCccccCCCCCeec
Confidence 34688888888854
No 200
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=54.03 E-value=2.9 Score=36.62 Aligned_cols=18 Identities=22% Similarity=0.477 Sum_probs=16.1
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.|.-+.+.+++|||||+.
T Consensus 43 ~Ge~vaivG~sGsGKSTL 60 (255)
T d2hyda1 43 KGETVAFVGMSGGGKSTL 60 (255)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 678899999999999983
No 201
>d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=54.02 E-value=7.6 Score=29.18 Aligned_cols=74 Identities=16% Similarity=0.091 Sum_probs=52.7
Q ss_pred HHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEeccccccCC
Q 009500 368 QKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447 (533)
Q Consensus 368 ~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~~~Gld 447 (533)
..|..++.. ...++|+.|.+...++.|.+.|. ..++.+..+.+ .. .|..+. +-|+..-+..|+-
T Consensus 24 ~~L~~~i~~---~~~~Vli~a~s~g~~erl~e~L~-~~~i~~~~~~~-~~---------~~~~~~--~~i~~~~l~~GF~ 87 (117)
T d2eyqa2 24 DALRKFLET---FDGPVVFSVESEGRREALGELLA-RIKIAPQRIMR-LD---------EASDRG--RYLMIGAAEHGFV 87 (117)
T ss_dssp HHHHHHHTT---CCSCCCEEESSHHHHHHHHHHHG-GGTCCCEECSS-GG---------GCCTTC--CEEEECCCCSCEE
T ss_pred HHHHHHHHh---CCCeEEEEECCccHHHHHHHHHH-HcCCCceEecC-hh---------hhcCce--EEEEEecCccccc
Confidence 445555533 34589999999999999999998 67888765543 22 233444 5566677899998
Q ss_pred CCCccEEEEc
Q 009500 448 LLGVRQVIIF 457 (533)
Q Consensus 448 i~~v~~VI~~ 457 (533)
+++.+++|.-
T Consensus 88 ~~~~~l~vIt 97 (117)
T d2eyqa2 88 DTVRNLALIC 97 (117)
T ss_dssp ETTTTEEEEE
T ss_pred cCCCCEEEEE
Confidence 8888888863
No 202
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=53.80 E-value=5.2 Score=34.00 Aligned_cols=13 Identities=38% Similarity=0.583 Sum_probs=11.8
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
.++.|.-|||||+
T Consensus 6 ~iitGFLGaGKTT 18 (222)
T d1nija1 6 TLLTGFLGAGKTT 18 (222)
T ss_dssp EEEEESSSSSCHH
T ss_pred EEEeeCCCCCHHH
Confidence 5789999999998
No 203
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=53.34 E-value=2.9 Score=36.20 Aligned_cols=17 Identities=29% Similarity=0.509 Sum_probs=15.4
Q ss_pred CCCcEEEEccCCCchhH
Q 009500 171 SGKSLLVSANTGSGKTA 187 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~ 187 (533)
.|.-+.+.+|.|||||+
T Consensus 30 ~Ge~~~iiG~sGsGKST 46 (240)
T d3dhwc1 30 AGQIYGVIGASGAGKST 46 (240)
T ss_dssp SSCEEEEEESTTSSHHH
T ss_pred CCCEEEEECCCCCCHHH
Confidence 67778999999999998
No 204
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=52.57 E-value=3.4 Score=33.60 Aligned_cols=20 Identities=30% Similarity=0.622 Sum_probs=16.7
Q ss_pred CCCcEEEEccCCCchhHHHH
Q 009500 171 SGKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~l 190 (533)
.|+-+++.++.|+|||..++
T Consensus 14 ~g~gvli~G~sg~GKS~la~ 33 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETAL 33 (169)
T ss_dssp TTEEEEEEESTTSSHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHH
Confidence 56779999999999997543
No 205
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=52.41 E-value=29 Score=29.97 Aligned_cols=77 Identities=16% Similarity=0.219 Sum_probs=50.5
Q ss_pred CCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchH--------H---HHHHHHc-CCceeecChHHHHHHH
Q 009500 208 QKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMA--------R---QVYRIQQ-GVELIVGTPGRLIDLL 275 (533)
Q Consensus 208 ~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~--------~---~~~~l~~-~~~Iiv~Tp~~l~~~l 275 (533)
..+.++||.+.++.-+..+.+.+.+. ++++..+.|..... . .+....+ .++|+|+| +..
T Consensus 159 ~~~~k~iiF~~~~~~~~~~~~~L~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~~~vLv~T-----~~~ 229 (286)
T d1wp9a2 159 KQNSKIIVFTNYRETAKKIVNELVKD----GIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVAT-----SVG 229 (286)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHT----TCCEEEECCSSCC-------CCHHHHHHHHHHHTSCSEEEEC-----GGG
T ss_pred CCCCcEEEEeCcHHhHHHHHHHHHHc----CCceEEeeccccccccchhchHHHHHHHHHHHcCCCcEEEEc-----cce
Confidence 34667999999999988888777653 45666666542221 1 1223333 47899999 333
Q ss_pred HcCCCCCCCeeEEEEeccc
Q 009500 276 MKHDIELDDIRMFVLDEVD 294 (533)
Q Consensus 276 ~~~~~~l~~i~~vVvDEah 294 (533)
...+++..+++||.=+.+
T Consensus 230 -~~Gld~~~~~~Vi~~d~~ 247 (286)
T d1wp9a2 230 -EEGLDVPEVDLVVFYEPV 247 (286)
T ss_dssp -GGGGGSTTCCEEEESSCC
T ss_pred -eccccCCCCCEEEEeCCC
Confidence 345688899998875444
No 206
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=51.66 E-value=2.2 Score=36.82 Aligned_cols=17 Identities=41% Similarity=0.663 Sum_probs=15.1
Q ss_pred CCCcEEEEccCCCchhH
Q 009500 171 SGKSLLVSANTGSGKTA 187 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~ 187 (533)
.|.-+.+.+|.|||||+
T Consensus 25 ~Ge~~~liGpsGaGKST 41 (229)
T d3d31a2 25 SGEYFVILGPTGAGKTL 41 (229)
T ss_dssp TTCEEEEECCCTHHHHH
T ss_pred CCCEEEEECCCCCcHHH
Confidence 56778899999999998
No 207
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=51.44 E-value=36 Score=30.26 Aligned_cols=75 Identities=12% Similarity=0.061 Sum_probs=38.1
Q ss_pred CCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchHHHH----HHHHHhC------CCCcEEEecccCcHHHH
Q 009500 260 GVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQV----MQIFRAI------SLPQILMYSATISQEVE 329 (533)
Q Consensus 260 ~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~~~i----~~i~~~~------~~~q~i~~SAT~~~~~~ 329 (533)
...+++.+|+.=.++-..+.--+.--+++|+-=+|........... ...+..+ ..+.++..||.-...+.
T Consensus 166 D~~v~v~~p~~GD~iQ~~k~gilE~aDi~vvNKaD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~V~~~Sa~~g~Gi~ 245 (323)
T d2qm8a1 166 DFFLVLMLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYRAALHILTPPSATWTPPVVTISGLHGKGLD 245 (323)
T ss_dssp SEEEEEECSCC------CCTTHHHHCSEEEEECCSTTCCHHHHHHHHHHHHHHHTTBCCSBTTBCCCEEEEBTTTTBSHH
T ss_pred ceEEEEeeccchhhhhhhhhhHhhhhheeeEeccccccchHHHHHHHHHHHHHhhcccccccCCCCceEEEEecCCCCHH
Confidence 3557788887654444333333444578888888754322222222 2222222 34679999998765555
Q ss_pred HHHHh
Q 009500 330 KMSSS 334 (533)
Q Consensus 330 ~~~~~ 334 (533)
++...
T Consensus 246 el~~~ 250 (323)
T d2qm8a1 246 SLWSR 250 (323)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 208
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=50.83 E-value=3.9 Score=36.80 Aligned_cols=22 Identities=23% Similarity=0.191 Sum_probs=16.3
Q ss_pred EEEEccCCCchhHHHHHHHHHHHH
Q 009500 175 LLVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~ 198 (533)
.++.|++|||||.. +-++..++
T Consensus 29 nvi~G~NGsGKS~i--l~AI~~~L 50 (329)
T g1xew.1 29 TAIVGANGSGKSNI--GDAILFVL 50 (329)
T ss_dssp EEEEECTTSSSHHH--HHHHHHHT
T ss_pred EEEECCCCCCHHHH--HHHHHHHH
Confidence 48999999999984 44555444
No 209
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=50.44 E-value=6.7 Score=32.92 Aligned_cols=95 Identities=19% Similarity=0.292 Sum_probs=56.1
Q ss_pred CCCceEEEEcccHHHHHH-----HHHHHHHHhcCC--CCeEEEEEcCCch---HHHHHHHHcC-CceeecChHHHHHHHH
Q 009500 208 QKNPLAMVLTPTRELCIQ-----VEEQAKLLGKGL--PFKTALVVGGDAM---ARQVYRIQQG-VELIVGTPGRLIDLLM 276 (533)
Q Consensus 208 ~~~~~~Lil~Ptr~L~~Q-----~~~~~~~~~~~~--~~~~~~~~gg~~~---~~~~~~l~~~-~~Iiv~Tp~~l~~~l~ 276 (533)
..+.++.||||..+-... ..+....+.+.+ +.++..++|..+. ...+....++ .+|+||| ..+
T Consensus 27 ~~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~~iLVaT-----tVi- 100 (206)
T d1gm5a4 27 MRGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYDILVST-----TVI- 100 (206)
T ss_dssp TTSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSSSBCCCS-----SCC-
T ss_pred HcCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEEEe-----hhh-
Confidence 356778899998643332 222333333322 3566677776543 3344455544 9999999 333
Q ss_pred cCCCCCCCeeEEEEeccchhhhcchHHHHHHHHHhC
Q 009500 277 KHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAI 312 (533)
Q Consensus 277 ~~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~ 312 (533)
...+++.+..++|+..++++. ..++.++.-+.
T Consensus 101 E~GIDip~a~~iii~~a~~fg----lsqlhQlrGRv 132 (206)
T d1gm5a4 101 EVGIDVPRANVMVIENPERFG----LAQLHQLRGRV 132 (206)
T ss_dssp CSCSCCTTCCEEEBCSCSSSC----TTHHHHHHHTS
T ss_pred hccccccCCcEEEEEccCCcc----HHHHHhhhhhe
Confidence 345789999999999999753 34555655555
No 210
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=50.16 E-value=3.6 Score=36.58 Aligned_cols=17 Identities=47% Similarity=0.784 Sum_probs=15.3
Q ss_pred CCCcEEEEccCCCchhH
Q 009500 171 SGKSLLVSANTGSGKTA 187 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~ 187 (533)
.|.-+.+.||+|||||+
T Consensus 61 ~Ge~vaivG~nGsGKST 77 (281)
T d1r0wa_ 61 KGEMLAITGSTGSGKTS 77 (281)
T ss_dssp TTCEEEEEESTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 67778999999999998
No 211
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=49.50 E-value=1.3 Score=36.60 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=15.6
Q ss_pred EEEEccCCCchhHHHHHHHHHHHH
Q 009500 175 LLVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~ 198 (533)
.++.|++|||||. ++-++..++
T Consensus 27 tvi~G~NGsGKSt--il~Ai~~~L 48 (222)
T d1qhla_ 27 TTLSGGNGAGKST--TMAAFVTAL 48 (222)
T ss_dssp HHHHSCCSHHHHH--HHHHHHHHH
T ss_pred EEEECCCCCCHHH--HHHHHHHHh
Confidence 3678999999998 444555544
No 212
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=49.50 E-value=45 Score=24.51 Aligned_cols=83 Identities=17% Similarity=0.089 Sum_probs=48.6
Q ss_pred ceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEE
Q 009500 211 PLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVL 290 (533)
Q Consensus 211 ~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVv 290 (533)
|++||+=-...++..+...++.. |+.+.. ..+....+..+... .++++|+
T Consensus 2 PkILiVDD~~~~~~~l~~~L~~~----g~~v~~---------------------a~~~~eal~~~~~~-----~~dlvl~ 51 (121)
T d1ys7a2 2 PRVLVVDDDSDVLASLERGLRLS----GFEVAT---------------------AVDGAEALRSATEN-----RPDAIVL 51 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT----TCEEEE---------------------ESSHHHHHHHHHHS-----CCSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHC----CCEEEE---------------------ECCHHHHHHHHHhC-----CCCEEEE
Confidence 67888877777766665555543 444433 23444445555543 3568888
Q ss_pred eccchhhhcchHHHHHHHHHhCCCCcEEEecccCc
Q 009500 291 DEVDCMLQRGFRDQVMQIFRAISLPQILMYSATIS 325 (533)
Q Consensus 291 DEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT~~ 325 (533)
|- .|.+++=...+..+.+..+...+|++||.-.
T Consensus 52 D~--~mP~~~G~el~~~ir~~~~~~piI~lt~~~~ 84 (121)
T d1ys7a2 52 DI--NMPVLDGVSVVTALRAMDNDVPVCVLSARSS 84 (121)
T ss_dssp ES--SCSSSCHHHHHHHHHHTTCCCCEEEEECCCT
T ss_pred Ee--eccCcccHHHHHHHHhcCCCCEEEEEEeeCC
Confidence 84 2334432344455555557788999998643
No 213
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=49.40 E-value=3.6 Score=37.26 Aligned_cols=17 Identities=41% Similarity=0.387 Sum_probs=13.8
Q ss_pred cEEEEccCCCchhHHHH
Q 009500 174 SLLVSANTGSGKTASFL 190 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~l 190 (533)
.++++||||+|||..+-
T Consensus 55 ~~lf~Gp~G~GKt~lak 71 (315)
T d1qvra3 55 SFLFLGPTGVGKTELAK 71 (315)
T ss_dssp EEEEBSCSSSSHHHHHH
T ss_pred EEEEECCCcchHHHHHH
Confidence 46788999999998543
No 214
>d1em8a_ c.128.1.1 (A:) DNA polymerase III chi subunit {Escherichia coli [TaxId: 562]}
Probab=49.21 E-value=8.5 Score=30.23 Aligned_cols=116 Identities=16% Similarity=0.089 Sum_probs=65.2
Q ss_pred HHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEeccccccCC
Q 009500 368 QKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGILGRGVE 447 (533)
Q Consensus 368 ~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~~~Gld 447 (533)
..+..++......+.+++|+|++.+.++.|.+.|- ...-..+.-|+-.... .....+|+++|+.. -.
T Consensus 23 ~~~crL~~K~~~~g~ri~I~~~d~~~~~~lD~~LW-t~~~~sFiPH~~~~~~---------~~~~~PI~l~~~~~---~~ 89 (147)
T d1em8a_ 23 QLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALW-ARPAESFVPHNLAGEG---------PRGGAPVEIAWPQK---RS 89 (147)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH-HCSTTCCCCEEETTCS---------STTCCSEEEECTTS---CC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-CCCCcccccccccCCC---------ccCCCCEEecCCCC---CC
Confidence 33445555555567799999999999999999996 3332223333321100 01456799988632 12
Q ss_pred CCCccEEEEcCCCCCHhHHHHhhcccCCCCCccEEEEEecCc--CHHHHHHHHHHHHhcCCC
Q 009500 448 LLGVRQVIIFDMPNSIKEYVHQIGRASQMGDEGTAIVFVNEE--NKNLFQELVDILKSSGAG 507 (533)
Q Consensus 448 i~~v~~VI~~~~p~s~~~y~qriGR~gR~g~~g~~~~l~~~~--~~~~~~~l~~~l~~~~~~ 507 (533)
....+++||.+.-. -.+.++.- .++-++..+ .+...++--+.++..|-+
T Consensus 90 ~~~~dvlinl~~~~--p~~~~~f~---------Rvieiv~~de~~~~~aR~rwk~yk~~G~~ 140 (147)
T d1em8a_ 90 SSRRDILISLRTSF--ADFATAFT---------EVVDFVPYEDSLKQLARERYKAYRVAGFN 140 (147)
T ss_dssp CSCCSEEEECCSSC--CGGGGGCS---------EEEEEECSSHHHHHHHHHHHHHHHHTTEE
T ss_pred CccceEEEECCCCC--chhhhccC---------EEEEEECcCHHHHHHHHHHHHHHHHCCCC
Confidence 23457888887421 12222221 345555433 344556666677766644
No 215
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=48.99 E-value=8.9 Score=33.56 Aligned_cols=39 Identities=18% Similarity=0.199 Sum_probs=24.7
Q ss_pred CCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEccc
Q 009500 171 SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPT 219 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Pt 219 (533)
.|+=+.+.++.|||||..++..+ ..... .+..++|+---
T Consensus 56 ~g~itei~G~~~sGKT~l~l~~~-~~aqk---------~g~~v~yiDtE 94 (268)
T d1xp8a1 56 RGRITEIYGPESGGKTTLALAIV-AQAQK---------AGGTCAFIDAE 94 (268)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHH-HHHHH---------TTCCEEEEESS
T ss_pred CceEEEEecCCccchHHHHHHHH-HHHHh---------CCCEEEEEECC
Confidence 34557899999999998654433 33322 24557776543
No 216
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=48.98 E-value=2.4 Score=36.83 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=15.5
Q ss_pred CCCcEEEEccCCCchhH
Q 009500 171 SGKSLLVSANTGSGKTA 187 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~ 187 (533)
.|.-+.+.+|.|||||+
T Consensus 30 ~Ge~~~iiG~sGsGKST 46 (242)
T d1oxxk2 30 NGERFGILGPSGAGKTT 46 (242)
T ss_dssp TTCEEEEECSCHHHHHH
T ss_pred CCCEEEEECCCCCcHHH
Confidence 67778999999999998
No 217
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=48.86 E-value=3.6 Score=33.90 Aligned_cols=14 Identities=50% Similarity=0.776 Sum_probs=12.3
Q ss_pred EEEEccCCCchhHH
Q 009500 175 LLVSANTGSGKTAS 188 (533)
Q Consensus 175 vli~a~TGsGKT~~ 188 (533)
+.+.|..|||||+.
T Consensus 12 I~ieG~~GsGKTTl 25 (197)
T d2vp4a1 12 VLIEGNIGSGKTTY 25 (197)
T ss_dssp EEEECSTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 67799999999984
No 218
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=48.76 E-value=3.4 Score=37.51 Aligned_cols=15 Identities=33% Similarity=0.510 Sum_probs=12.3
Q ss_pred EEEEccCCCchhHHH
Q 009500 175 LLVSANTGSGKTASF 189 (533)
Q Consensus 175 vli~a~TGsGKT~~~ 189 (533)
+|+.+|+|+|||+.+
T Consensus 126 ~l~~G~pG~GKT~la 140 (321)
T d1w44a_ 126 VIVTGKGNSGKTPLV 140 (321)
T ss_dssp EEEECSSSSCHHHHH
T ss_pred EEEECCCCccHHHHH
Confidence 455899999999854
No 219
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=48.43 E-value=39 Score=26.99 Aligned_cols=72 Identities=18% Similarity=0.134 Sum_probs=51.8
Q ss_pred CCCEEEEEcCcccHHHHHHHHHhhc---CCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEeccc------cccCCCCCc
Q 009500 381 TPPAVVYVGSRLGADLLSNAISVTT---GMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGIL------GRGVELLGV 451 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~~~~---~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~------~~Gldi~~v 451 (533)
++++|+.++++.-++..++.+.+.. +..+..+|++....+|...... ..++++|... ...+...++
T Consensus 52 ~~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~i~t~~~~~~~~~~~~~~~~~~ 126 (200)
T d1wp9a1 52 GGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWAR-----AKVIVATPQTIENDLLAGRISLEDV 126 (200)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHHHBCSCGGGEEEECSCSCHHHHHHHHHH-----CSEEEECHHHHHHHHHTTSCCTTSC
T ss_pred CCcEEEEcCchHHHHHHHHHHHHhhcccccceeeeecccchhHHHHhhhc-----ccccccccchhHHHHhhhhhhcccc
Confidence 5689999999998888887776443 4568889999998888776543 4688888522 233455677
Q ss_pred cEEEEc
Q 009500 452 RQVIIF 457 (533)
Q Consensus 452 ~~VI~~ 457 (533)
++||.-
T Consensus 127 ~~vIiD 132 (200)
T d1wp9a1 127 SLIVFD 132 (200)
T ss_dssp SEEEEE
T ss_pred ceEEEE
Confidence 887763
No 220
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=48.12 E-value=9.3 Score=28.56 Aligned_cols=41 Identities=12% Similarity=-0.013 Sum_probs=32.8
Q ss_pred ccCCCCCEEEEEcCcccHHHHHHHHHhhcCC-eEEEEcCCCCH
Q 009500 377 KQHFTPPAVVYVGSRLGADLLSNAISVTTGM-KALSIHGEKPM 418 (533)
Q Consensus 377 ~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~-~~~~ih~~~~~ 418 (533)
....+.++++||.+-..+...+..|. ..|+ .+..+.||+..
T Consensus 68 ~~~~~~~iv~~C~~G~rs~~a~~~L~-~~G~~nv~~l~GG~~~ 109 (119)
T d1tq1a_ 68 HFGQSDNIIVGCQSGGRSIKATTDLL-HAGFTGVKDIVGGYSA 109 (119)
T ss_dssp TCCTTSSEEEEESSCSHHHHHHHHHH-HHHCCSEEEEECCHHH
T ss_pred hcCCCcEEEEEcCCcCcHHHHHHHHH-hcccCCeEEecChHHH
Confidence 33456789999999888888999998 6777 58889999753
No 221
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=48.00 E-value=3.6 Score=33.78 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=11.7
Q ss_pred EEccCCCchhHHHH
Q 009500 177 VSANTGSGKTASFL 190 (533)
Q Consensus 177 i~a~TGsGKT~~~l 190 (533)
|.|+.|||||+++-
T Consensus 8 itG~~gSGKstva~ 21 (191)
T d1uf9a_ 8 ITGNIGSGKSTVAA 21 (191)
T ss_dssp EEECTTSCHHHHHH
T ss_pred EECCCCCCHHHHHH
Confidence 67999999998643
No 222
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.89 E-value=7.9 Score=32.38 Aligned_cols=18 Identities=17% Similarity=0.342 Sum_probs=13.8
Q ss_pred CCcEEEEccCCCchhHHH
Q 009500 172 GKSLLVSANTGSGKTASF 189 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~ 189 (533)
|+=+.+.|+.|||||+..
T Consensus 3 G~lI~ieG~dGsGKsT~~ 20 (209)
T d1nn5a_ 3 GALIVLEGVDRAGKSTQS 20 (209)
T ss_dssp CCEEEEEESTTSSHHHHH
T ss_pred eeEEEEECCCCCCHHHHH
Confidence 444566799999999853
No 223
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=47.73 E-value=4.2 Score=35.11 Aligned_cols=13 Identities=31% Similarity=0.544 Sum_probs=11.4
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+.+.+|.|||||+
T Consensus 27 ~~liGpnGaGKST 39 (240)
T d2onka1 27 CVLLGPTGAGKSV 39 (240)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCChHHH
Confidence 4578999999998
No 224
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=47.34 E-value=3.9 Score=34.31 Aligned_cols=16 Identities=25% Similarity=0.389 Sum_probs=12.8
Q ss_pred EEEEccCCCchhHHHH
Q 009500 175 LLVSANTGSGKTASFL 190 (533)
Q Consensus 175 vli~a~TGsGKT~~~l 190 (533)
+-|.|..|||||+++-
T Consensus 6 IgitG~igSGKStv~~ 21 (208)
T d1vhta_ 6 VALTGGIGSGKSTVAN 21 (208)
T ss_dssp EEEECCTTSCHHHHHH
T ss_pred EEEECCCcCCHHHHHH
Confidence 3479999999999653
No 225
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=47.29 E-value=4 Score=37.19 Aligned_cols=19 Identities=37% Similarity=0.494 Sum_probs=15.4
Q ss_pred CCCc--EEEEccCCCchhHHH
Q 009500 171 SGKS--LLVSANTGSGKTASF 189 (533)
Q Consensus 171 ~g~~--vli~a~TGsGKT~~~ 189 (533)
.|.+ +++.|+||||||...
T Consensus 82 ~G~n~~i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 82 NGCVCSCFAYGQTGSGKTYTM 102 (330)
T ss_dssp HCCEEEEEEECCTTSSHHHHH
T ss_pred cCCCeEEEeeeccccccceee
Confidence 5776 567899999999864
No 226
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.37 E-value=4.3 Score=33.81 Aligned_cols=15 Identities=33% Similarity=0.426 Sum_probs=13.9
Q ss_pred CcEEEEccCCCchhH
Q 009500 173 KSLLVSANTGSGKTA 187 (533)
Q Consensus 173 ~~vli~a~TGsGKT~ 187 (533)
|++++.|++|+|||.
T Consensus 1 k~V~ivG~~~~GKTs 15 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTL 15 (207)
T ss_dssp CEEEEECSTTSSHHH
T ss_pred CEEEEECCCCCCHHH
Confidence 579999999999997
No 227
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=46.14 E-value=6.3 Score=39.76 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=23.2
Q ss_pred HHHHHHh---CCCcEEEEccCCCchhHHHHHHHHHHHH
Q 009500 164 QAIPSAL---SGKSLLVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 164 ~~i~~i~---~g~~vli~a~TGsGKT~~~llp~l~~l~ 198 (533)
.|+..+. ..+.+|+.|.+|||||.++ --++.++.
T Consensus 75 ~Ay~~l~~~~~~QsIiisGeSGsGKTe~~-k~il~yL~ 111 (684)
T d1lkxa_ 75 DAYRSMRQSQENQCVIISGESGAGKTEAS-KKIMQFLT 111 (684)
T ss_dssp HHHHHHHHHCCCEEEEEECSTTSSHHHHH-HHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEEEcCCCCCHHHHH-HHHHHHHH
Confidence 5555554 3446999999999999874 33455554
No 228
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.56 E-value=5.5 Score=37.06 Aligned_cols=22 Identities=27% Similarity=0.302 Sum_probs=15.8
Q ss_pred EEEEccCCCchhHHHHHHHHHHHH
Q 009500 175 LLVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~ 198 (533)
.++.|++|||||.. +=++..++
T Consensus 28 ~~i~G~NGsGKS~i--leAi~~~l 49 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNM--MDAISFVL 49 (427)
T ss_dssp EEEECSTTSSHHHH--HHHHHHHT
T ss_pred EEEECCCCCCHHHH--HHHHHHHh
Confidence 57899999999984 33444443
No 229
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=43.21 E-value=6 Score=32.97 Aligned_cols=14 Identities=36% Similarity=0.401 Sum_probs=11.9
Q ss_pred EEEccCCCchhHHH
Q 009500 176 LVSANTGSGKTASF 189 (533)
Q Consensus 176 li~a~TGsGKT~~~ 189 (533)
-|.|+.|||||+++
T Consensus 6 gITG~igSGKStv~ 19 (205)
T d1jjva_ 6 GLTGGIGSGKTTIA 19 (205)
T ss_dssp EEECSTTSCHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 46999999999864
No 230
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=43.21 E-value=45 Score=29.67 Aligned_cols=27 Identities=26% Similarity=0.299 Sum_probs=17.2
Q ss_pred CCCc--EEEEccCCCchhHHHHHHHHHHHH
Q 009500 171 SGKS--LLVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 171 ~g~~--vli~a~TGsGKT~~~llp~l~~l~ 198 (533)
+|+. +-|.+++|+|||.. +-.+..++.
T Consensus 51 ~~~~~~IgitG~pGaGKSTL-i~~l~~~~~ 79 (327)
T d2p67a1 51 CGNTLRLGVTGTPGAGKSTF-LEAFGMLLI 79 (327)
T ss_dssp CSCSEEEEEEECTTSCHHHH-HHHHHHHHH
T ss_pred cCCceEEEeeCCCCCCHHHH-HHHHHHHHH
Confidence 4554 56689999999973 333334443
No 231
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=43.08 E-value=11 Score=32.77 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=23.6
Q ss_pred CcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEc
Q 009500 173 KSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLT 217 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~ 217 (533)
+-+++++.=|.|||+++...+..... .|.++|++-
T Consensus 9 ~~i~~sGKGGVGKTTvaa~lA~~lA~----------~G~rVLlvD 43 (296)
T d1ihua1 9 PYLFFTGKGGVGKTSISCATAIRLAE----------QGKRVLLVS 43 (296)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHH----------TTCCEEEEE
T ss_pred eEEEEECCCcChHHHHHHHHHHHHHH----------CCCCEEEEe
Confidence 34678999999999977654443322 355677765
No 232
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=42.96 E-value=5.3 Score=35.49 Aligned_cols=14 Identities=21% Similarity=0.572 Sum_probs=9.1
Q ss_pred EEEEccCCCchhHH
Q 009500 175 LLVSANTGSGKTAS 188 (533)
Q Consensus 175 vli~a~TGsGKT~~ 188 (533)
+-|+|++|||||+.
T Consensus 7 IgIaG~SGSGKTTv 20 (288)
T d1a7ja_ 7 ISVTGSSGAGTSTV 20 (288)
T ss_dssp EEEESCC---CCTH
T ss_pred EEEECCCCCcHHHH
Confidence 56799999999985
No 233
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=42.68 E-value=12 Score=28.36 Aligned_cols=38 Identities=11% Similarity=0.108 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCC
Q 009500 379 HFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKP 417 (533)
Q Consensus 379 ~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~ 417 (533)
..+.++++||.+-..+...+..|. ..|+.+..+.||+.
T Consensus 78 ~~~~~ivl~C~~G~rS~~aa~~L~-~~G~~v~~l~GG~~ 115 (130)
T d1yt8a4 78 VRGARLVLVDDDGVRANMSASWLA-QMGWQVAVLDGLSE 115 (130)
T ss_dssp SBTCEEEEECSSSSHHHHHHHHHH-HTTCEEEEECSCCG
T ss_pred CccceEEeecCCCccHHHHHHHHH-HcCCCeEEEcCchH
Confidence 345689999999888999999998 78999999999875
No 234
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=42.45 E-value=19 Score=31.43 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=20.7
Q ss_pred HHHHHHh---CCCcEEEEccCCCchhHH
Q 009500 164 QAIPSAL---SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 164 ~~i~~i~---~g~~vli~a~TGsGKT~~ 188 (533)
.+|+.++ .|+.+.+.|+.|+|||..
T Consensus 57 raID~l~pigkGQr~~If~~~g~GKt~l 84 (276)
T d2jdid3 57 KVVDLLAPYAKGGKIGLFGGAGVGKTVL 84 (276)
T ss_dssp HHHHHHSCEETTCEEEEEECTTSSHHHH
T ss_pred eeeeeeccccCCCEEEeeCCCCCCHHHH
Confidence 4566655 789999999999999974
No 235
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=41.55 E-value=11 Score=31.06 Aligned_cols=15 Identities=20% Similarity=0.426 Sum_probs=12.5
Q ss_pred EEEEccCCCchhHHH
Q 009500 175 LLVSANTGSGKTASF 189 (533)
Q Consensus 175 vli~a~TGsGKT~~~ 189 (533)
+.+.|.-|||||+..
T Consensus 3 I~ieG~dGsGKST~~ 17 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLV 17 (208)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 567899999999853
No 236
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=41.28 E-value=19 Score=36.70 Aligned_cols=93 Identities=18% Similarity=0.207 Sum_probs=46.4
Q ss_pred ccCcCCCHHH-HHHHHhhcC----ceEecCCCCCcccCcccCCC-CHHHHHHHHHcCCC--CCCHH--HHHHHHHHh-C-
Q 009500 104 SGFQSLTIGQ-TDSLRKRLE----INVKGDAVPAPILSFSSCSL-SQKLLQNIEAAGYD--MPTPV--QMQAIPSAL-S- 171 (533)
Q Consensus 104 ~~~~~~~~~~-~~~~~~~~~----i~~~~~~~p~~~~~f~~~~l-~~~l~~~l~~~g~~--~p~~~--Q~~~i~~i~-~- 171 (533)
..+..+++.. ...++.++. ....|. +--.+..|..+++ ++..++........ .|..+ =..|+..+. .
T Consensus 43 ~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~-iLiavNPyk~l~ly~~~~~~~y~~~~~~~~pPHifaiA~~Ay~~m~~~~ 121 (794)
T d2mysa2 43 AMMTHLHEPAVLYNLKERYAAWMIYTYSGL-FCVTVNPYKWLPVYNPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDR 121 (794)
T ss_dssp GGCSCCCHHHHHHHHHHTTTTTCCEEECSS-CEEEECCSSCCGGGCTTHHHHTTTCCTTSSCSCHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCHHHHHHHHHHHHcCCCceeeECC-EEEEECCCCCCCCCCHHHHHHHcCCCCCCCCCcHHHHHHHHHHHHHHcC
Confidence 3355666554 455676654 233353 2112222333332 33334433332222 23333 334555555 3
Q ss_pred -CCcEEEEccCCCchhHHHHHHHHHHHH
Q 009500 172 -GKSLLVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 172 -g~~vli~a~TGsGKT~~~llp~l~~l~ 198 (533)
.+.+|+.|..|||||.+.= -++.++.
T Consensus 122 ~~QsIiisGeSGaGKTe~~K-~il~yL~ 148 (794)
T d2mysa2 122 ENQSILITGESGAGKTVNTK-RVIQYFA 148 (794)
T ss_dssp CCEEEEEEECTTSCHHHHHH-HHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHH-HHHHHHH
Confidence 3459999999999998743 3445554
No 237
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=40.88 E-value=5.4 Score=33.50 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=14.5
Q ss_pred CCcEEEEccCCCchhHHH
Q 009500 172 GKSLLVSANTGSGKTASF 189 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~ 189 (533)
|.-+.+.|.+|||||+.+
T Consensus 24 g~vIwltGlsGsGKTTia 41 (208)
T d1m7ga_ 24 GLTIWLTGLSASGKSTLA 41 (208)
T ss_dssp CEEEEEECSTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 345788999999999754
No 238
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=40.22 E-value=6.5 Score=33.87 Aligned_cols=18 Identities=28% Similarity=0.545 Sum_probs=15.5
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.|.-+-+.+|.|+|||+.
T Consensus 31 ~Gei~~liGpnGaGKSTl 48 (240)
T d1ji0a_ 31 RGQIVTLIGANGAGKTTT 48 (240)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 567788999999999983
No 239
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=40.05 E-value=8 Score=32.12 Aligned_cols=19 Identities=26% Similarity=0.396 Sum_probs=15.4
Q ss_pred CCcEEEEccCCCchhHHHH
Q 009500 172 GKSLLVSANTGSGKTASFL 190 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~l 190 (533)
|+=+++.|+-|||||+..-
T Consensus 2 gkfIviEG~dGsGKsT~~~ 20 (210)
T d4tmka_ 2 SKYIVIEGLEGAGKTTARN 20 (210)
T ss_dssp CCEEEEEECTTSCHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHH
Confidence 5667889999999998543
No 240
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=39.78 E-value=8.4 Score=34.24 Aligned_cols=16 Identities=31% Similarity=0.486 Sum_probs=13.2
Q ss_pred cEEEEccCCCchhHHH
Q 009500 174 SLLVSANTGSGKTASF 189 (533)
Q Consensus 174 ~vli~a~TGsGKT~~~ 189 (533)
-.++.|+.|||||..+
T Consensus 25 ~~vi~G~NgsGKTtil 40 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLL 40 (369)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 3578999999999853
No 241
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.76 E-value=7.5 Score=34.43 Aligned_cols=13 Identities=38% Similarity=0.473 Sum_probs=10.8
Q ss_pred EEccCCCchhHHH
Q 009500 177 VSANTGSGKTASF 189 (533)
Q Consensus 177 i~a~TGsGKT~~~ 189 (533)
|+|++|||||+.+
T Consensus 32 i~G~qGSGKSTl~ 44 (286)
T d1odfa_ 32 FSGPQGSGKSFTS 44 (286)
T ss_dssp EECCTTSSHHHHH
T ss_pred eECCCCCCHHHHH
Confidence 5899999999643
No 242
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=39.75 E-value=8.6 Score=33.34 Aligned_cols=14 Identities=36% Similarity=0.551 Sum_probs=12.5
Q ss_pred EEEEccCCCchhHH
Q 009500 175 LLVSANTGSGKTAS 188 (533)
Q Consensus 175 vli~a~TGsGKT~~ 188 (533)
.+++|+.|+|||..
T Consensus 26 n~IvG~NGsGKSti 39 (292)
T g1f2t.1 26 NLIIGQNGSGKSSL 39 (292)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 47999999999985
No 243
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=39.68 E-value=40 Score=27.50 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=42.9
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCC--------------------------CCeEEEEEcCCchHHHHH--H-HH-c
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGL--------------------------PFKTALVVGGDAMARQVY--R-IQ-Q 259 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~--------------------------~~~~~~~~gg~~~~~~~~--~-l~-~ 259 (533)
+..+||.+|+|.-|..+...+....... ...+...++|.+...... . .. .
T Consensus 40 ~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~g 119 (201)
T d2p6ra4 40 NGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRRG 119 (201)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHTT
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhCC
Confidence 3458888888877776665555432211 012455677765444221 2 22 3
Q ss_pred CCceeecChHHHHHHHHcCCCCCCCeeEEEEe
Q 009500 260 GVELIVGTPGRLIDLLMKHDIELDDIRMFVLD 291 (533)
Q Consensus 260 ~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvD 291 (533)
..+|+|||. -+ ...+++....+||.|
T Consensus 120 ~i~vlvaT~-----~l-~~Gin~p~~~vvi~~ 145 (201)
T d2p6ra4 120 NIKVVVATP-----TL-AAGVNLPARRVIVRS 145 (201)
T ss_dssp SCCEEEECS-----TT-TSSSCCCBSEEEECC
T ss_pred CceEEEech-----HH-HhhcCCCCceEEEec
Confidence 388999993 22 244667777777653
No 244
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=39.49 E-value=12 Score=37.63 Aligned_cols=94 Identities=23% Similarity=0.285 Sum_probs=49.0
Q ss_pred ccCcCCCHHHH-HHHHhhc----CceEecCCCCCcccCcccCCC-CHHHHHHHHHcCCC--CCCHHH--HHHHHHHh---
Q 009500 104 SGFQSLTIGQT-DSLRKRL----EINVKGDAVPAPILSFSSCSL-SQKLLQNIEAAGYD--MPTPVQ--MQAIPSAL--- 170 (533)
Q Consensus 104 ~~~~~~~~~~~-~~~~~~~----~i~~~~~~~p~~~~~f~~~~l-~~~l~~~l~~~g~~--~p~~~Q--~~~i~~i~--- 170 (533)
..++.+++..+ ..|+.++ -....|. +--.+..|..+++ ++..++..+..... .|..+. ..|+..+.
T Consensus 45 ~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~-iLiavNP~k~l~iy~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~~ 123 (712)
T d1d0xa2 45 SELSYLNEPAVFHNLRVRYNQDLIYTYSGL-FLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDR 123 (712)
T ss_dssp GGCSSCCHHHHHHHHHHHHHTTCCEEEETT-EEEEECCSSCCSCCSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHT
T ss_pred hcCCCCCHHHHHHHHHHHHcCCCceeeECC-EEEEECCCCCCCCCCHHHHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhC
Confidence 33556665544 4455543 2344454 2222333333443 45555555443332 343333 34555554
Q ss_pred CCCcEEEEccCCCchhHHHHHHHHHHHHh
Q 009500 171 SGKSLLVSANTGSGKTASFLVPVISQCAN 199 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~~llp~l~~l~~ 199 (533)
..+.+|+.|..|||||.+.= -++.++..
T Consensus 124 ~nQsIiisGeSGaGKTe~~k-~il~yL~~ 151 (712)
T d1d0xa2 124 QNQSLLITGESGAGKTENTK-KVIQYLAS 151 (712)
T ss_dssp CCEEEEEECSTTSSHHHHHH-HHHHHHHH
T ss_pred CCceEEEeCCCCCCHHHHHH-HHHHHHHH
Confidence 34469999999999998743 34455543
No 245
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=38.92 E-value=15 Score=31.78 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=17.2
Q ss_pred CCCc-EEEEccCCCchhHHHHHHHHH
Q 009500 171 SGKS-LLVSANTGSGKTASFLVPVIS 195 (533)
Q Consensus 171 ~g~~-vli~a~TGsGKT~~~llp~l~ 195 (533)
.++. +++++.=|.|||++....+..
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~ 43 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVR 43 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 3444 455899999999976655443
No 246
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=37.59 E-value=12 Score=37.84 Aligned_cols=37 Identities=32% Similarity=0.403 Sum_probs=24.5
Q ss_pred HHHHHHHHHh---CCCcEEEEccCCCchhHHHHHHHHHHHH
Q 009500 161 VQMQAIPSAL---SGKSLLVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 161 ~Q~~~i~~i~---~g~~vli~a~TGsGKT~~~llp~l~~l~ 198 (533)
+=..|+..+. ..+.+|+.|.+|||||.+. --++.++.
T Consensus 77 vA~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~-k~il~yL~ 116 (710)
T d1br2a2 77 IADTAYRSMLQDREDQSILCTGESGAGKTENT-KKVIQYLA 116 (710)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHH-HHHHHHHH
Confidence 3445555555 2446999999999999874 33445554
No 247
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=37.50 E-value=11 Score=30.64 Aligned_cols=46 Identities=15% Similarity=0.188 Sum_probs=26.4
Q ss_pred EEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHh
Q 009500 175 LLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLG 234 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~ 234 (533)
+||.++..|||+.-+. .+. ...++++||+..+..-..+.+.+.+..
T Consensus 2 iLVtGGarSGKS~~AE-----~l~---------~~~~~~~YiAT~~~~D~em~~RI~~Hr 47 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAE-----ALI---------GDAPQVLYIATSQILDDEMAARIQHHK 47 (180)
T ss_dssp EEEEECTTSSHHHHHH-----HHH---------CSCSSEEEEECCCC------CHHHHHH
T ss_pred EEEECCCCccHHHHHH-----HHH---------hcCCCcEEEEccCCCCHHHHHHHHHHH
Confidence 5899999999997443 222 234568898877655444555554443
No 248
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.41 E-value=3.9 Score=34.71 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=48.0
Q ss_pred CCCCEEEEEcCcccHHHHHHHHH---hhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEecc-----c-cccCCCCC
Q 009500 380 FTPPAVVYVGSRLGADLLSNAIS---VTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGI-----L-GRGVELLG 450 (533)
Q Consensus 380 ~~~~~lIF~~s~~~~~~l~~~l~---~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~-----~-~~Gldi~~ 450 (533)
...++||++++++-|..++..+. ...+.....++++....+ .......+..+|||+|+- + ...+++.+
T Consensus 79 ~~~~alil~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~ 155 (218)
T d2g9na1 79 KATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRA---EVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKY 155 (218)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCS---TTTSSSSCCCSEEEECHHHHHHHHHTTSSCSTT
T ss_pred cCccEEEEcccchhhhhHHHHHhhhccccceeEEeeecccchhH---HHHHHhcCCCEEEEeCChhHHHHHhcCCccccc
Confidence 45679999999999988877665 234556666666543221 112233356789999972 2 34577778
Q ss_pred ccEEEEc
Q 009500 451 VRQVIIF 457 (533)
Q Consensus 451 v~~VI~~ 457 (533)
++++|.-
T Consensus 156 l~~lVlD 162 (218)
T d2g9na1 156 IKMFVLD 162 (218)
T ss_dssp CCEEEEE
T ss_pred ceEEEee
Confidence 8888863
No 249
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=36.33 E-value=66 Score=26.75 Aligned_cols=97 Identities=12% Similarity=0.066 Sum_probs=56.1
Q ss_pred cCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHH---H
Q 009500 180 NTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVY---R 256 (533)
Q Consensus 180 ~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~---~ 256 (533)
...|||... +.-++..+.. .+.++||.+..+.-..-+...+.+.. +..+..+.|+.+...... .
T Consensus 65 ~~~S~K~~~-l~~~l~~~~~---------~g~kviIFs~~~~~~~~l~~~l~~~~---~~~~~~i~G~~~~~~R~~~i~~ 131 (244)
T d1z5za1 65 VRRSGKMIR-TMEIIEEALD---------EGDKIAIFTQFVDMGKIIRNIIEKEL---NTEVPFLYGELSKKERDDIISK 131 (244)
T ss_dssp STTCHHHHH-HHHHHHHHHH---------TTCCEEEEESCHHHHHHHHHHHHHHH---CSCCCEECTTSCHHHHHHHHHH
T ss_pred hhhhhHHHH-HHHHHHhhcc---------cccceEEEeeceehHHHHHHHHHhhc---cceEEEEecccchhccchhhhh
Confidence 456888764 4445544432 35678999988877665555554432 456667788877654322 2
Q ss_pred HHc--CCceeecChHHHHHHHHcCCCCCCCeeEEEEeccc
Q 009500 257 IQQ--GVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVD 294 (533)
Q Consensus 257 l~~--~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah 294 (533)
... +..++++|+... ...+++.....+|+=+.+
T Consensus 132 F~~~~~~~vll~~~~~~-----g~Glnl~~a~~vi~~~~~ 166 (244)
T d1z5za1 132 FQNNPSVKFIVLSVKAG-----GFGINLTSANRVIHFDRW 166 (244)
T ss_dssp HHHCTTCCEEEEECCTT-----CCCCCCTTCSEEEECSCC
T ss_pred hhccccchhcccccccc-----ccccccchhhhhhhcCch
Confidence 222 356777775331 235667766666654443
No 250
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=35.82 E-value=25 Score=31.12 Aligned_cols=90 Identities=13% Similarity=-0.011 Sum_probs=57.9
Q ss_pred CCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcC-------C--C---CHHHHHHHHHHHhcCCCcEEEEeccccccCCC
Q 009500 381 TPPAVVYVGSRLGADLLSNAISVTTGMKALSIHG-------E--K---PMKERREIMRSFLVGEVPVIVATGILGRGVEL 448 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~-------~--~---~~~~r~~~~~~f~~g~~~VLvaT~~~~~Gldi 448 (533)
.+|+||.|++...|+.+++.|+.-.+..+..+-+ . . ...+|..++..+.+++..|+|+|-.+..+-=.
T Consensus 14 ~~p~lvv~~~~~~A~~l~~~L~~~~~~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~~~iiits~~al~~~~~ 93 (308)
T d2b2na1 14 AGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVC 93 (308)
T ss_dssp SSCEEEEESSHHHHHHHHHHHHTTCSSCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCCSSEEEEEHHHHTBCCC
T ss_pred CCCEEEEcCCHHHHHHHHHHHHhcCCCceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcCCceEEeechhhhhhcc
Confidence 4689999999999999999997434444332211 1 1 13468889999999988899988543333322
Q ss_pred CC-----ccEEEEcCCCCCHhHHHHhh
Q 009500 449 LG-----VRQVIIFDMPNSIKEYVHQI 470 (533)
Q Consensus 449 ~~-----v~~VI~~~~p~s~~~y~qri 470 (533)
|. ....+..+-..+.+......
T Consensus 94 p~~~~~~~~~~l~~g~~~~~~~l~~~L 120 (308)
T d2b2na1 94 PHSFLHGHALVMKKGQRLSRDALRTQL 120 (308)
T ss_dssp CHHHHHHHCEEEETTCBCCHHHHHHHH
T ss_pred cHHHHHHHHHhhhhhccccHHHHHHHH
Confidence 21 23456666666666555443
No 251
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=35.77 E-value=8.4 Score=33.55 Aligned_cols=18 Identities=28% Similarity=0.556 Sum_probs=15.4
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.|.-+-+.+|.|||||+.
T Consensus 27 ~GEi~~iiG~sGsGKSTL 44 (258)
T d1b0ua_ 27 AGDVISIIGSSGSGKSTF 44 (258)
T ss_dssp TTCEEEEECCTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 567788999999999973
No 252
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=35.72 E-value=93 Score=27.62 Aligned_cols=97 Identities=10% Similarity=0.054 Sum_probs=57.8
Q ss_pred cCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHH---HH
Q 009500 180 NTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQV---YR 256 (533)
Q Consensus 180 ~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~---~~ 256 (533)
+-.|||.. .+.-++..+.. ..+.++||.+..+....-+...+... ++....+.|+.+..... ..
T Consensus 97 ~~~S~Kl~-~L~~ll~~~~~--------~~g~KvlIFs~~~~~ld~l~~~l~~~----g~~~~~l~G~~~~~~R~~~i~~ 163 (346)
T d1z3ix1 97 PQLSGKML-VLDYILAMTRT--------TTSDKVVLVSNYTQTLDLFEKLCRNR----RYLYVRLDGTMSIKKRAKIVER 163 (346)
T ss_dssp GGGSHHHH-HHHHHHHHHHH--------HCCCEEEEEESCHHHHHHHHHHHHHH----TCCEEEECSSCCHHHHHHHHHH
T ss_pred cccCHHHH-HHHHHHHHHHH--------hcCCceeEEeehhhhhHHHHHHHhhh----hccccccccchhHHHHHHHHHh
Confidence 34589975 34444444332 24568999998887766555555544 67888888887765432 23
Q ss_pred HHcC---CceeecChHHHHHHHHcCCCCCCCeeEEEEeccc
Q 009500 257 IQQG---VELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVD 294 (533)
Q Consensus 257 l~~~---~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah 294 (533)
...+ ..|++.++. .-...++|.....||+=+.+
T Consensus 164 F~~~~~~~~vlLls~~-----agg~GlnL~~a~~vi~~d~~ 199 (346)
T d1z3ix1 164 FNNPSSPEFIFMLSSK-----AGGCGLNLIGANRLVMFDPD 199 (346)
T ss_dssp HHSTTCCCCEEEEEGG-----GSCTTCCCTTEEEEEECSCC
T ss_pred hhcccccceeeeecch-----hhhhccccccceEEEEecCC
Confidence 3332 235665532 11245678888877776654
No 253
>d1vl1a_ c.124.1.1 (A:) 6-phosphogluconolactonase {Thermotoga maritima [TaxId: 2336]}
Probab=35.58 E-value=23 Score=29.50 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccc
Q 009500 221 ELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVD 294 (533)
Q Consensus 221 ~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah 294 (533)
.++..+.+.+++....-+.-.+.+.||. ||..+...+....+..+++.++.+||-.
T Consensus 14 ~~a~~i~~~~~~~~~~~~~~~i~lsGG~------------------tp~~~y~~L~~~~~~w~kv~~~~~DER~ 69 (218)
T d1vl1a_ 14 FVVEKIRTKMEKLLEEKDKIFVVLAGGR------------------TPLPVYEKLAEQKFPWNRIHFFLSDERY 69 (218)
T ss_dssp HHHHHHHHHHHHHHHHCSCEEEEECCST------------------THHHHHHHHTTSCCCGGGEEEEESEEES
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCh------------------hHHHHHHHHHhcCCCcceEEEEecceec
Confidence 4555555555555444444456666664 4444555555666778899999999943
No 254
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.36 E-value=7.2 Score=32.95 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=14.2
Q ss_pred CCcEEEEccCCCchhHH
Q 009500 172 GKSLLVSANTGSGKTAS 188 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~ 188 (533)
.+-+.+.|+.|||||+.
T Consensus 2 ~k~I~ieG~dGsGKST~ 18 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTF 18 (241)
T ss_dssp CEEEEEECSTTSSHHHH
T ss_pred CCEEEEECCCCCCHHHH
Confidence 34578899999999985
No 255
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=34.84 E-value=7.7 Score=30.97 Aligned_cols=13 Identities=31% Similarity=0.680 Sum_probs=11.8
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|+-|+|||+
T Consensus 36 i~L~G~LGaGKTt 48 (158)
T d1htwa_ 36 VYLNGDLGAGKTT 48 (158)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEecCCCccHHH
Confidence 6679999999997
No 256
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=34.57 E-value=8.4 Score=32.88 Aligned_cols=18 Identities=28% Similarity=0.512 Sum_probs=15.8
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.|.-+-+.+|.|+|||+.
T Consensus 24 ~Gei~~iiG~nGaGKSTL 41 (231)
T d1l7vc_ 24 AGEILHLVGPNGAGKSTL 41 (231)
T ss_dssp TTCEEECBCCTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 677788999999999983
No 257
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=34.24 E-value=13 Score=31.52 Aligned_cols=29 Identities=24% Similarity=0.396 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHhCCCcEEEEccCCCchhH
Q 009500 159 TPVQMQAIPSALSGKSLLVSANTGSGKTA 187 (533)
Q Consensus 159 ~~~Q~~~i~~i~~g~~vli~a~TGsGKT~ 187 (533)
+....+.+...+.|+-.++.|++|.|||.
T Consensus 82 ~~~g~~~L~~~l~~kt~~~~G~SGVGKST 110 (225)
T d1u0la2 82 TGMGIEELKEYLKGKISTMAGLSGVGKSS 110 (225)
T ss_dssp TCTTHHHHHHHHSSSEEEEECSTTSSHHH
T ss_pred cchhHhhHHHHhcCCeEEEECCCCCCHHH
Confidence 34455667777789999999999999997
No 258
>d2gvia2 g.39.1.18 (A:169-201) Uncharacterized protein Ta1109 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=33.81 E-value=3.5 Score=22.04 Aligned_cols=10 Identities=40% Similarity=1.228 Sum_probs=7.3
Q ss_pred eeeeeccccc
Q 009500 38 KCVICGRYGE 47 (533)
Q Consensus 38 ~c~~c~~~~~ 47 (533)
.|.+||+|--
T Consensus 5 rcdvcgeyty 14 (33)
T d2gvia2 5 RCDVCGEYTY 14 (33)
T ss_dssp ECTTTCCEEE
T ss_pred EEeeccceee
Confidence 4888887754
No 259
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=33.01 E-value=17 Score=31.68 Aligned_cols=56 Identities=7% Similarity=-0.040 Sum_probs=38.9
Q ss_pred CCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecCh
Q 009500 209 KNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTP 268 (533)
Q Consensus 209 ~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp 268 (533)
.+.++|+.++++.-+..+.+.+++. +.++..++|+..............+++++|.
T Consensus 177 ~~~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~lvaT~ 232 (305)
T d2bmfa2 177 FKGKTVWFVPSIKAGNDIAACLRKN----GKKVIQLSRKTFDSEYIKTRTNDWDFVVTTD 232 (305)
T ss_dssp SCSCEEEECSCHHHHHHHHHHHHHH----TCCCEECCTTCHHHHGGGGGTSCCSEEEECG
T ss_pred hCCCEEEEeccHHHHHHHHHHHHhC----CCCEEEeCCcChHHHHhhhhccchhhhhhhH
Confidence 3466999999999999888888776 4566677777654332222223478999994
No 260
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=33.00 E-value=11 Score=31.85 Aligned_cols=16 Identities=25% Similarity=0.293 Sum_probs=13.2
Q ss_pred EEEEccCCCchhHHHH
Q 009500 175 LLVSANTGSGKTASFL 190 (533)
Q Consensus 175 vli~a~TGsGKT~~~l 190 (533)
+-+.|+.|||||+++-
T Consensus 4 IgiTG~igSGKsTva~ 19 (241)
T d1deka_ 4 IFLSGVKRSGKDTTAD 19 (241)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 4578999999999754
No 261
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=32.55 E-value=9.2 Score=33.72 Aligned_cols=14 Identities=29% Similarity=0.423 Sum_probs=12.5
Q ss_pred EEEEccCCCchhHH
Q 009500 175 LLVSANTGSGKTAS 188 (533)
Q Consensus 175 vli~a~TGsGKT~~ 188 (533)
.+++|+.|||||..
T Consensus 27 nvlvG~NgsGKS~i 40 (308)
T d1e69a_ 27 TAIVGPNGSGKSNI 40 (308)
T ss_dssp EEEECCTTTCSTHH
T ss_pred EEEECCCCCcHHHH
Confidence 58899999999984
No 262
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=32.53 E-value=26 Score=26.70 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=31.7
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHHhhcCC-eEEEEcCCCC
Q 009500 379 HFTPPAVVYVGSRLGADLLSNAISVTTGM-KALSIHGEKP 417 (533)
Q Consensus 379 ~~~~~~lIF~~s~~~~~~l~~~l~~~~~~-~~~~ih~~~~ 417 (533)
..+.++++||.+-..+...+..|. ..|+ .+..+.||+.
T Consensus 80 ~~~~~ivvyC~~G~rs~~aa~~L~-~~G~~nV~~l~GG~~ 118 (137)
T d1qxna_ 80 DPEKPVVVFCKTAARAALAGKTLR-EYGFKTIYNSEGGMD 118 (137)
T ss_dssp CTTSCEEEECCSSSCHHHHHHHHH-HHTCSCEEEESSCHH
T ss_pred CcccceeeeecccchHHHHHHHHH-HcCCCcEEEecCHHH
Confidence 456689999999999999999998 7788 4778999954
No 263
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=32.33 E-value=11 Score=32.54 Aligned_cols=15 Identities=33% Similarity=0.587 Sum_probs=13.5
Q ss_pred CcEEEEccCCCchhH
Q 009500 173 KSLLVSANTGSGKTA 187 (533)
Q Consensus 173 ~~vli~a~TGsGKT~ 187 (533)
-++++.|.||+|||.
T Consensus 33 l~I~LvG~tg~GKSS 47 (257)
T d1h65a_ 33 LTILVMGKGGVGKSS 47 (257)
T ss_dssp EEEEEEESTTSSHHH
T ss_pred cEEEEECCCCCcHHH
Confidence 368999999999997
No 264
>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}
Probab=32.08 E-value=1.6e+02 Score=25.97 Aligned_cols=95 Identities=14% Similarity=0.212 Sum_probs=50.3
Q ss_pred HHHHHHHHhhcCceEecCC-CCCcccCcccCCCCHHHHHHHHH------cCCCCCCHHHHHHHHHHhC--------CCcE
Q 009500 111 IGQTDSLRKRLEINVKGDA-VPAPILSFSSCSLSQKLLQNIEA------AGYDMPTPVQMQAIPSALS--------GKSL 175 (533)
Q Consensus 111 ~~~~~~~~~~~~i~~~~~~-~p~~~~~f~~~~l~~~l~~~l~~------~g~~~p~~~Q~~~i~~i~~--------g~~v 175 (533)
+.+|+.+.....- .|.+ ++-.+-+ -+++.|+.+.+.+.+ .||..+.+--++++-..++ ..++
T Consensus 16 s~k~~~~~~~~~~--~g~~vi~l~~g~-pdf~~p~~v~~al~~~~~~~~~~Y~~g~~~Lr~aia~~~~~~~g~~~~~~~I 92 (394)
T d1c7na_ 16 SLKWDLMYSQNPE--VGNEVVPLSVAD-MEFKNPPELIEGLKKYLDETVLGYTGPTEEYKKTVKKWMKDRHQWDIQTDWI 92 (394)
T ss_dssp BHHHHHHHHHCTT--CCTTCCCCCSSS-CSSCCCHHHHHHHHHHHHHCCCSSBCCCHHHHHHHHHHHHHHHCCCCCGGGE
T ss_pred CHHHHHHHHHhHh--cCCCeEEccCCC-CCCCCCHHHHHHHHHHHhCCCcCCCCCCHHHHHHHHHHHHHhcCCCCCCcce
Confidence 4567777665432 1221 2211111 146677877776653 3677777766777766653 2356
Q ss_pred EEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHH
Q 009500 176 LVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTREL 222 (533)
Q Consensus 176 li~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L 222 (533)
++.. |=+-+..+ ++..+. ..+..+++..|+-..
T Consensus 93 ~vt~----G~~~al~~-~~~~~~---------~pgd~vi~~~p~~~~ 125 (394)
T d1c7na_ 93 INTA----GVVPAVFN-AVREFT---------KPGDGVIIITPVYYP 125 (394)
T ss_dssp EEES----SHHHHHHH-HHHHHC---------CTTCEEEECSSCCTH
T ss_pred Eeec----cchhhhhh-hhcccc---------ccccccccccCcccc
Confidence 6654 33332222 222222 356668888887544
No 265
>d1xj1a_ g.3.6.5 (A:) Vhv1.1, polydnaviral gene product {Campoletis sonorensis virus, CsIV [TaxId: 10484]}
Probab=31.71 E-value=5.2 Score=23.67 Aligned_cols=27 Identities=33% Similarity=0.470 Sum_probs=22.1
Q ss_pred hhhhcccCCCCCeeeeecccccccccC
Q 009500 26 SKDQREALPEEPKCVICGRYGEYICDE 52 (533)
Q Consensus 26 ~~~~~~~~~~~~~c~~c~~~~~~~~~~ 52 (533)
+++-|.+....|.=++||+-|+-.|.-
T Consensus 18 ~~~~~~~~S~~~R~FiC~~~G~~~C~P 44 (47)
T d1xj1a_ 18 SKTVRYGDSKNVRKFICDRDGEGVCVP 44 (47)
T ss_dssp CEEECCSSCCEEEEEEEECSSSSEEEE
T ss_pred ccceeecCCCCcceeeecCCCCEeeCc
Confidence 566688888888999999999988754
No 266
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=31.70 E-value=17 Score=37.15 Aligned_cols=93 Identities=18% Similarity=0.243 Sum_probs=47.9
Q ss_pred ccCcCCCHHHH-HHHHhhcC----ceEecCCCCCcccCcccCCC-CHHHHHHHHHcCCC--CCCH--HHHHHHHHHh-C-
Q 009500 104 SGFQSLTIGQT-DSLRKRLE----INVKGDAVPAPILSFSSCSL-SQKLLQNIEAAGYD--MPTP--VQMQAIPSAL-S- 171 (533)
Q Consensus 104 ~~~~~~~~~~~-~~~~~~~~----i~~~~~~~p~~~~~f~~~~l-~~~l~~~l~~~g~~--~p~~--~Q~~~i~~i~-~- 171 (533)
..+..+++..+ ..++.++. ....|. +--.+..|..+++ ++..++........ .|.. +=..|+..+. .
T Consensus 41 ~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~-iLiavNP~k~l~iy~~~~~~~y~~~~~~~~~PHiyavA~~Ay~~m~~~~ 119 (789)
T d1kk8a2 41 ANMTYLNEASVLYNLRSRYTSGLIYTYSGL-FCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDR 119 (789)
T ss_dssp GGSSCCSHHHHHHHHHHHHHTTCCEEEETT-EEEEECCSSCCSTTSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCHHHHHHHHHHHHcCCCceEeECC-EEEEECCCCCCCCCCHHHHHHHcCCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 34566665543 44555542 344464 2112223333333 45555555433222 2333 3334555554 3
Q ss_pred -CCcEEEEccCCCchhHHHHHHHHHHHH
Q 009500 172 -GKSLLVSANTGSGKTASFLVPVISQCA 198 (533)
Q Consensus 172 -g~~vli~a~TGsGKT~~~llp~l~~l~ 198 (533)
.+.+|+.|..|||||.+.= -++.++.
T Consensus 120 ~nQ~IiisGESGaGKTe~~K-~il~yL~ 146 (789)
T d1kk8a2 120 ENQSCLITGESGAGKTENTK-KVIMYLA 146 (789)
T ss_dssp SEEEEEEECSTTSSHHHHHH-HHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHH-HHHHHHH
Confidence 3469999999999998743 3445554
No 267
>d1a6bb_ g.40.1.1 (B:) Zinc finger protein ncp10 {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=31.51 E-value=11 Score=21.79 Aligned_cols=21 Identities=19% Similarity=0.597 Sum_probs=18.1
Q ss_pred hcccCCCCCeeeeeccccccc
Q 009500 29 QREALPEEPKCVICGRYGEYI 49 (533)
Q Consensus 29 ~~~~~~~~~~c~~c~~~~~~~ 49 (533)
+|-+..+...|.-|-..|||+
T Consensus 3 rrr~~L~kDQCAyCke~GHW~ 23 (40)
T d1a6bb_ 3 RRRSQLDRDQCAYCKEKGHWA 23 (40)
T ss_dssp TTCCSCCSSSCSSSCCTTCCT
T ss_pred cccCcccchhhHHHhhcCchh
Confidence 466777888999999999988
No 268
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=31.39 E-value=9.1 Score=30.45 Aligned_cols=15 Identities=27% Similarity=0.306 Sum_probs=13.3
Q ss_pred cEEEEccCCCchhHH
Q 009500 174 SLLVSANTGSGKTAS 188 (533)
Q Consensus 174 ~vli~a~TGsGKT~~ 188 (533)
.+++.|++|+|||..
T Consensus 15 kI~lvG~~~vGKTsL 29 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTTL 29 (186)
T ss_dssp EEEEEEETTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 489999999999973
No 269
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=30.73 E-value=11 Score=29.14 Aligned_cols=14 Identities=29% Similarity=0.458 Sum_probs=12.6
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|+.|+|||.
T Consensus 2 kivlvG~~~vGKSs 15 (160)
T d1r8sa_ 2 RILMVGLDAAGKTT 15 (160)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 37899999999997
No 270
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=30.73 E-value=22 Score=25.70 Aligned_cols=39 Identities=18% Similarity=0.202 Sum_probs=32.0
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHHhhcCCe-EEEEcCCCCH
Q 009500 379 HFTPPAVVYVGSRLGADLLSNAISVTTGMK-ALSIHGEKPM 418 (533)
Q Consensus 379 ~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~-~~~ih~~~~~ 418 (533)
..+.++++||.+-..+...+..|. ..|+. +..+.||+..
T Consensus 56 ~~~~~ivv~c~~g~rs~~~a~~L~-~~G~~~v~~l~GG~~~ 95 (108)
T d1gmxa_ 56 DFDTPVMVMCYHGNSSKGAAQYLL-QQGYDVVYSIDGGFEA 95 (108)
T ss_dssp CTTSCEEEECSSSSHHHHHHHHHH-HHTCSSEEEETTHHHH
T ss_pred cccCcccccCCCChHHHHHHHHHH-HcCCCCEEEEcChHHH
Confidence 456789999999889999999998 67874 7788898753
No 271
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=30.69 E-value=9.5 Score=32.71 Aligned_cols=18 Identities=28% Similarity=0.482 Sum_probs=14.7
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.|.-+-+.||.|+|||+.
T Consensus 27 ~Gei~glvG~nGaGKSTL 44 (238)
T d1vpla_ 27 EGEIFGLIGPNGAGKTTT 44 (238)
T ss_dssp TTCEEEEECCTTSSHHHH
T ss_pred CCCEEEEECCCCCCHHHH
Confidence 455667899999999983
No 272
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=30.38 E-value=15 Score=37.22 Aligned_cols=37 Identities=27% Similarity=0.312 Sum_probs=24.7
Q ss_pred HHHHHHHHh---CCCcEEEEccCCCchhHHHHHHHHHHHHh
Q 009500 162 QMQAIPSAL---SGKSLLVSANTGSGKTASFLVPVISQCAN 199 (533)
Q Consensus 162 Q~~~i~~i~---~g~~vli~a~TGsGKT~~~llp~l~~l~~ 199 (533)
=..|+..+. ..+.+|+.|.+|||||.+.= -++.++..
T Consensus 81 A~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~k-~il~~l~~ 120 (730)
T d1w7ja2 81 AEEAYKQMARDERNQSIIVSGESGAGKTVSAK-YAMRYFAT 120 (730)
T ss_dssp HHHHHHHHHHHTCCEEEEEECSTTSSHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHH-HHHHHHHH
Confidence 345555554 34569999999999998643 35555543
No 273
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=30.20 E-value=12 Score=32.43 Aligned_cols=18 Identities=33% Similarity=0.536 Sum_probs=15.2
Q ss_pred CCCcEEEEccCCCchhHH
Q 009500 171 SGKSLLVSANTGSGKTAS 188 (533)
Q Consensus 171 ~g~~vli~a~TGsGKT~~ 188 (533)
.|.-+-+.+|.|+|||+.
T Consensus 29 ~Gei~~liG~nGaGKSTL 46 (254)
T d1g6ha_ 29 KGDVTLIIGPNGSGKSTL 46 (254)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 566678899999999983
No 274
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=29.92 E-value=94 Score=22.53 Aligned_cols=88 Identities=9% Similarity=0.063 Sum_probs=52.0
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEE
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vV 289 (533)
++++||+=....+...+...++.. |+.+..... ....+..+.. ..+++||
T Consensus 3 k~~ILIVDDd~~~~~~l~~~L~~~----g~~v~~a~~---------------------~~~a~~~l~~-----~~~dlii 52 (123)
T d1krwa_ 3 RGIVWVVDDDSSIRWVLERALAGA----GLTCTTFEN---------------------GNEVLAALAS-----KTPDVLL 52 (123)
T ss_dssp CCEEEEESSSHHHHHHHHHHHHHT----TCEEEEESS---------------------SHHHHHHHTT-----CCCSEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHC----CCEEEEeCC---------------------HHHHHHHHHh-----CCCCEEE
Confidence 356777777766666555555443 455444333 3333444443 2467899
Q ss_pred EeccchhhhcchHHHHHHHHHhCCCCcEEEecccCcHHHH
Q 009500 290 LDEVDCMLQRGFRDQVMQIFRAISLPQILMYSATISQEVE 329 (533)
Q Consensus 290 vDEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT~~~~~~ 329 (533)
+| . .|.+++=...+..+.+..+..++|++||.-..+..
T Consensus 53 ~D-~-~mp~~~G~el~~~l~~~~~~~piI~~t~~~~~~~~ 90 (123)
T d1krwa_ 53 SD-I-RMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAA 90 (123)
T ss_dssp EC-C-SSSSSTTHHHHHHHHHHSSSCCEEESCCCSCHHHH
T ss_pred eh-h-hcCCchHHHHHHHHHHhCCCCeEEEEecCCCHHHH
Confidence 99 3 35544323445566666678899999998765443
No 275
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.26 E-value=12 Score=29.83 Aligned_cols=13 Identities=23% Similarity=0.613 Sum_probs=12.3
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
++++|+.|+|||.
T Consensus 9 I~vvG~~~vGKSS 21 (174)
T d1wmsa_ 9 VILLGDGGVGKSS 21 (174)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999997
No 276
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=28.87 E-value=12 Score=29.33 Aligned_cols=14 Identities=36% Similarity=0.458 Sum_probs=12.7
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|+.|+|||.
T Consensus 4 ki~ivG~~~~GKTs 17 (165)
T d1ksha_ 4 RLLMLGLDNAGKTT 17 (165)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999997
No 277
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=28.85 E-value=25 Score=30.91 Aligned_cols=38 Identities=8% Similarity=0.173 Sum_probs=30.9
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchH
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMA 251 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~ 251 (533)
+.++||.++++..++++...+++. ++++..++++.+..
T Consensus 36 ggk~LVFcnSR~~aE~La~~L~~~----Gi~a~~~Hgglsq~ 73 (299)
T d1a1va2 36 GGRHLIFCHSKKKCDELAAKLVAL----GINAVAYYRGLDVS 73 (299)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHT----TCCEEEECTTSCGG
T ss_pred CCCEEEECCcHHHHHHHHHHHHHC----CCCEEEEeCCchHH
Confidence 567999999999999988887764 67888888876654
No 278
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=28.02 E-value=1e+02 Score=22.28 Aligned_cols=88 Identities=7% Similarity=0.107 Sum_probs=50.7
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEE
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vV 289 (533)
.|++||+=.....+..+...+... |+.+... .+++..+..+... .+++||
T Consensus 2 tp~ILiVDDd~~~~~~l~~~L~~~----g~~v~~a---------------------~~~~~al~~l~~~-----~~dlii 51 (121)
T d1xhfa1 2 TPHILIVEDELVTRNTLKSIFEAE----GYDVFEA---------------------TDGAEMHQILSEY-----DINLVI 51 (121)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTT----TCEEEEE---------------------SSHHHHHHHHHHS-----CCSEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHC----CCEEEEE---------------------CChHHHHHHHHhc-----CCCEEE
Confidence 467888888877766655555443 4544333 3334444555543 467899
Q ss_pred EeccchhhhcchHHHHHHHHHhCCCCcEEEecccCcHHHHH
Q 009500 290 LDEVDCMLQRGFRDQVMQIFRAISLPQILMYSATISQEVEK 330 (533)
Q Consensus 290 vDEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT~~~~~~~ 330 (533)
+| .+ |.+.+ +-.+...++..+...+|++|+.-......
T Consensus 52 ~D-~~-mp~~~-G~~~~~~~r~~~~~pii~lt~~~~~~~~~ 89 (121)
T d1xhfa1 52 MD-IN-LPGKN-GLLLARELREQANVALMFLTGRDNEVDKI 89 (121)
T ss_dssp EC-SS-CSSSC-HHHHHHHHHHHCCCEEEEEESCCSHHHHH
T ss_pred ee-cc-cCCcc-CcHHHHHHHhcCCCcEEEEECCCCHHHHH
Confidence 98 22 43332 22333334444778899999876554433
No 279
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=27.96 E-value=1.4e+02 Score=27.16 Aligned_cols=116 Identities=12% Similarity=0.050 Sum_probs=68.2
Q ss_pred EEEEEecchhhHHHHHHHHHhccCCCCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEc----------------------
Q 009500 356 QLAIWVESNKKKQKLFDILMSKQHFTPPAVVYVGSRLGADLLSNAISVTTGMKALSIH---------------------- 413 (533)
Q Consensus 356 ~~~~~~~~~~k~~~l~~~l~~~~~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih---------------------- 413 (533)
|.+.-+....|...+..++... +.|+||.+++...|..+++.|+...+-..+.+.
T Consensus 34 q~l~GltGS~ka~~iA~l~~~~---~rp~LVVt~n~~~A~qL~~dL~~~l~~~~v~~f~~~~~~~~~~~~~~~~~~~~~~ 110 (413)
T d1t5la1 34 QTLLGATGTGKTFTISNVIAQV---NKPTLVIAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYAQPEAYVPQTDTYIEK 110 (413)
T ss_dssp EEEEECTTSCHHHHHHHHHHHH---TCCEEEECSSHHHHHHHHHHHHHHCTTSEEEEECCGGGTCCCSEEETTTTEEECC
T ss_pred EEEeCCCCcHHHHHHHHHHHHh---CCCEEEEeCCHHHHHHHHHHHHHHcCCCceeeccchhhcccccccCchhhhhhhh
Confidence 3444455566666666666543 458999999999999999999744443332211
Q ss_pred -CCCCHH--HHHHHHHHHhcCCCcEEEEe-ccccccCCCCC----ccEEEEcCCCCCHhHHHHhhcccC
Q 009500 414 -GEKPMK--ERREIMRSFLVGEVPVIVAT-GILGRGVELLG----VRQVIIFDMPNSIKEYVHQIGRAS 474 (533)
Q Consensus 414 -~~~~~~--~r~~~~~~f~~g~~~VLvaT-~~~~~Gldi~~----v~~VI~~~~p~s~~~y~qriGR~g 474 (533)
...+.. .+.........+...|+|+| ..+-+++-.|. ....+..+.-.+.++++++.-..|
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~~~vIVv~~~a~~~~l~~p~~~~~~~l~l~~G~~i~~~~l~~~L~~~G 179 (413)
T d1t5la1 111 DAKINDEIDKLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQ 179 (413)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHCSCEEEEECGGGGSCCCCHHHHHHTSEEEETTCSCCHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHhhhhhhccccCCceeeeecccccccCChHHhhheeEEEecCchhhHHHHHHHHHHhc
Confidence 111221 22222233333455565555 45667776553 235666777778888887764443
No 280
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=27.87 E-value=1e+02 Score=22.39 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=47.1
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEE
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFV 289 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vV 289 (533)
+|++||+=........+...+.. .|+.+... .+++..+.++.. ..+++||
T Consensus 2 kP~ILiVDDd~~~~~~l~~~L~~----~g~~v~~a---------------------~~~~~al~~~~~-----~~~dlii 51 (128)
T d1yioa2 2 KPTVFVVDDDMSVREGLRNLLRS----AGFEVETF---------------------DCASTFLEHRRP-----EQHGCLV 51 (128)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHT----TTCEEEEE---------------------SSHHHHHHHCCT-----TSCEEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHH----cCCCcccc---------------------ccHHHHHHHHHh-----cCCCEee
Confidence 45677777766665544444433 34444332 333344444322 4578899
Q ss_pred EeccchhhhcchHHHHHHHHHhCCCCcEEEecccC
Q 009500 290 LDEVDCMLQRGFRDQVMQIFRAISLPQILMYSATI 324 (533)
Q Consensus 290 vDEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT~ 324 (533)
+|- .|.+++=...+..+....+...++++|+.-
T Consensus 52 lD~--~mp~~~G~~~~~~i~~~~~~~~ii~lt~~~ 84 (128)
T d1yioa2 52 LDM--RMPGMSGIELQEQLTAISDGIPIVFITAHG 84 (128)
T ss_dssp EES--CCSSSCHHHHHHHHHHTTCCCCEEEEESCT
T ss_pred hhh--hcccchhHHHHHHHHhhCCCCeEEEEEEEC
Confidence 985 344444345555665555778898888864
No 281
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.49 E-value=17 Score=30.17 Aligned_cols=18 Identities=33% Similarity=0.521 Sum_probs=15.0
Q ss_pred CCcEEEEccCCCchhHHH
Q 009500 172 GKSLLVSANTGSGKTASF 189 (533)
Q Consensus 172 g~~vli~a~TGsGKT~~~ 189 (533)
|+=+.+.|.-|||||+..
T Consensus 3 Gk~I~iEG~DGsGKST~~ 20 (214)
T d1tmka_ 3 GKLILIEGLDRTGKTTQC 20 (214)
T ss_dssp CCEEEEEESTTSSHHHHH
T ss_pred eEEEEEECCCCCcHHHHH
Confidence 556788999999999853
No 282
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.47 E-value=12 Score=29.66 Aligned_cols=13 Identities=38% Similarity=0.685 Sum_probs=12.3
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|+.|+|||.
T Consensus 8 i~vvG~~~vGKTs 20 (169)
T d3raba_ 8 ILIIGNSSVGKTS 20 (169)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999997
No 283
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.01 E-value=13 Score=30.30 Aligned_cols=14 Identities=36% Similarity=0.657 Sum_probs=12.8
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|++|+|||.
T Consensus 5 ~V~lvG~~n~GKTS 18 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTS 18 (209)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999998
No 284
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=26.96 E-value=51 Score=28.66 Aligned_cols=26 Identities=27% Similarity=0.406 Sum_probs=20.9
Q ss_pred HHHHHHh---CCCcEEEEccCCCchhHHH
Q 009500 164 QAIPSAL---SGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 164 ~~i~~i~---~g~~vli~a~TGsGKT~~~ 189 (533)
.+|+.++ .|+.+.+.++.|+|||...
T Consensus 57 raID~l~pig~GQr~~If~~~g~GKt~ll 85 (285)
T d2jdia3 57 KAVDSLVPIGRGQRELIIGDRQTGKTSIA 85 (285)
T ss_dssp HHHHHHSCCBTTCBCEEEESTTSSHHHHH
T ss_pred eEEecccCccCCCEEEeecCCCCChHHHH
Confidence 4555555 7899999999999999753
No 285
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.92 E-value=16 Score=30.76 Aligned_cols=15 Identities=27% Similarity=0.386 Sum_probs=12.9
Q ss_pred cEEEEccCCCchhHH
Q 009500 174 SLLVSANTGSGKTAS 188 (533)
Q Consensus 174 ~vli~a~TGsGKT~~ 188 (533)
-+++.|..|||||+.
T Consensus 4 ~IviEG~~GsGKST~ 18 (241)
T d2ocpa1 4 RLSIEGNIAVGKSTF 18 (241)
T ss_dssp EEEEEECTTSSHHHH
T ss_pred EEEEECCCCCcHHHH
Confidence 367899999999984
No 286
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=26.84 E-value=14 Score=29.25 Aligned_cols=13 Identities=23% Similarity=0.516 Sum_probs=12.1
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|++|+|||.
T Consensus 3 V~liG~~n~GKSs 15 (171)
T d1mkya1 3 VLIVGRPNVGKST 15 (171)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6889999999997
No 287
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=26.42 E-value=60 Score=23.41 Aligned_cols=38 Identities=21% Similarity=0.287 Sum_probs=31.0
Q ss_pred CCCCCEEEEEcCcccHHHHHHHHHhhcCCe-EEEEcCCCC
Q 009500 379 HFTPPAVVYVGSRLGADLLSNAISVTTGMK-ALSIHGEKP 417 (533)
Q Consensus 379 ~~~~~~lIF~~s~~~~~~l~~~l~~~~~~~-~~~ih~~~~ 417 (533)
....++|+||.+=..+-.....|+ ..|++ +..|.|++.
T Consensus 80 ~~~~~ii~yC~sG~~A~~~~~~L~-~lG~~~v~~y~Gs~~ 118 (120)
T d1urha2 80 SYDKPIIVSCGSGVTAAVVLLALA-TLDVPNVKLYDGAWS 118 (120)
T ss_dssp CSSSCEEEECCSSSTHHHHHHHHH-HTTCSSCEEECCSCC
T ss_pred CccCceEEEccchhHHHHHHHHHH-HcCCCCceEcCCChh
Confidence 456689999999888888888887 78885 777888875
No 288
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=25.85 E-value=15 Score=28.49 Aligned_cols=14 Identities=36% Similarity=0.612 Sum_probs=12.7
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.++++|.+|+|||.
T Consensus 7 kI~ivG~~~vGKSS 20 (169)
T d1upta_ 7 RILILGLDGAGKTT 20 (169)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999997
No 289
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.67 E-value=14 Score=29.51 Aligned_cols=14 Identities=14% Similarity=0.522 Sum_probs=12.7
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|+||+|||.
T Consensus 2 ~I~lvG~~nvGKSs 15 (184)
T d2cxxa1 2 TIIFAGRSNVGKST 15 (184)
T ss_dssp EEEEEEBTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999998
No 290
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=25.32 E-value=75 Score=25.36 Aligned_cols=75 Identities=9% Similarity=0.058 Sum_probs=57.4
Q ss_pred CCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHHHHHHHHHHhcCCCcEEEEeccc------cccCCCCCccEE
Q 009500 381 TPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKERREIMRSFLVGEVPVIVATGIL------GRGVELLGVRQV 454 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~r~~~~~~f~~g~~~VLvaT~~~------~~Gldi~~v~~V 454 (533)
..++++.++++.-+......++ ..+.......+.....+..........+...+++.|... ........+..|
T Consensus 65 ~~~~~~v~P~~~L~~q~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~~v~~l 143 (206)
T d1oywa2 65 NGLTVVVSPLISLMKDQVDQLQ-ANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLL 143 (206)
T ss_dssp SSEEEEECSCHHHHHHHHHHHH-HTTCCEEEECTTSCHHHHHHHHHHHHHTCCSEEEECHHHHTSTTHHHHHTTSCEEEE
T ss_pred cCceEEeccchhhhhhHHHHHH-hhcccccccccccccccchhHHHHHhcCCceEEEEechhhhchhhcccchhheeeee
Confidence 4578999999999999999997 677777778888888888888888888999999988632 122334456666
Q ss_pred EE
Q 009500 455 II 456 (533)
Q Consensus 455 I~ 456 (533)
|.
T Consensus 144 vi 145 (206)
T d1oywa2 144 AV 145 (206)
T ss_dssp EE
T ss_pred ee
Confidence 64
No 291
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=25.23 E-value=46 Score=27.97 Aligned_cols=72 Identities=17% Similarity=0.200 Sum_probs=41.8
Q ss_pred CceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCCc---hHHHHHHHHc-CCceeecChHHHHHHHHcCCCCCCC-
Q 009500 210 NPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGDA---MARQVYRIQQ-GVELIVGTPGRLIDLLMKHDIELDD- 284 (533)
Q Consensus 210 ~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~~---~~~~~~~l~~-~~~Iiv~Tp~~l~~~l~~~~~~l~~- 284 (533)
++.+||.++|+.-|..+++.++.. + +||.. .......+.. .++|+|||... .+ .....+++.+
T Consensus 25 ~~~~iif~~~~~~~~~l~~~l~~~-----~-----hg~~~~~~R~~~~~~f~~g~~~vLVaT~a~-~~-v~~rGlDip~~ 92 (248)
T d1gkub2 25 GTGGIIYARTGEEAEEIYESLKNK-----F-----RIGIVTATKKGDYEKFVEGEIDHLIGTAHY-YG-TLVRGLDLPER 92 (248)
T ss_dssp CSCEEEEESSHHHHHHHHHTTTTS-----S-----CEEECTTSSSHHHHHHHHTSCSEEEEECC--------CCSCCTTT
T ss_pred CCCEEEEECCHHHHHHHHHHHHHh-----c-----cCCCCHHHHHHHHHHHHhCCCeEEEEeccc-cc-hhhhccCcccc
Confidence 456999999999988777765432 1 22222 2223344444 48999999421 01 1134567764
Q ss_pred eeEEEEecc
Q 009500 285 IRMFVLDEV 293 (533)
Q Consensus 285 i~~vVvDEa 293 (533)
+++||.=++
T Consensus 93 v~~VI~~d~ 101 (248)
T d1gkub2 93 IRFAVFVGC 101 (248)
T ss_dssp CCEEEEESC
T ss_pred ccEEEEeCC
Confidence 898885444
No 292
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=25.20 E-value=1.3e+02 Score=22.40 Aligned_cols=43 Identities=7% Similarity=-0.052 Sum_probs=28.6
Q ss_pred CeeEEEEeccchhhhcchHHHHHHHHHhCCCCcEEEecccCcHHH
Q 009500 284 DIRMFVLDEVDCMLQRGFRDQVMQIFRAISLPQILMYSATISQEV 328 (533)
Q Consensus 284 ~i~~vVvDEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT~~~~~ 328 (533)
.+++||+| .+ |.+++=...+..+.+..+..++|++||.-..+.
T Consensus 44 ~~dlil~D-~~-mP~~~G~el~~~lr~~~~~~pvI~lT~~~~~~~ 86 (140)
T d1qkka_ 44 FAGIVISD-IR-MPGMDGLALFRKILALDPDLPMILVTGHGDIPM 86 (140)
T ss_dssp CCSEEEEE-SC-CSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHH
T ss_pred CcchHHHh-hc-cCCCCHHHHHHHHHHhCCCCcEEEEECCCCHHH
Confidence 46789998 33 555542344555666667889999999765443
No 293
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=25.18 E-value=13 Score=29.35 Aligned_cols=14 Identities=21% Similarity=0.446 Sum_probs=13.0
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.++++|..|+|||.
T Consensus 17 kI~vvG~~~~GKSs 30 (177)
T d1zj6a1 17 KVIIVGLDNAGKTT 30 (177)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 68999999999996
No 294
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=24.99 E-value=15 Score=29.82 Aligned_cols=14 Identities=14% Similarity=0.449 Sum_probs=12.8
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+.+.|++|+|||.
T Consensus 25 ~I~lvG~~n~GKST 38 (195)
T d1svia_ 25 EIALAGRSNVGKSS 38 (195)
T ss_dssp EEEEEEBTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 48899999999997
No 295
>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=24.90 E-value=85 Score=22.75 Aligned_cols=48 Identities=13% Similarity=0.217 Sum_probs=27.0
Q ss_pred EEEeccchhhhcchHHHHHHHHHhCCCCcEEEecccCcHHHHHHHHhhcC
Q 009500 288 FVLDEVDCMLQRGFRDQVMQIFRAISLPQILMYSATISQEVEKMSSSISK 337 (533)
Q Consensus 288 vVvDEah~~~~~~~~~~i~~i~~~~~~~q~i~~SAT~~~~~~~~~~~~~~ 337 (533)
+|+|=||.-. ++......+......+.++.++++-.++...+.+.+..
T Consensus 14 iilD~AHN~~--~~~~l~~~l~~~~~~~~~~v~g~~~dKd~~~~l~~l~~ 61 (129)
T d2gc6a1 14 IVIDGAHNPD--GINGLITALKQLFSQPITVIAGILADKDYAAMADRLTA 61 (129)
T ss_dssp EEECCCCSHH--HHHHHHHHHHHHCSSCCEEEECCC----CCSSSSTTTT
T ss_pred EEEECCCCHH--HHHHHhhccccccchhhhhhccccCCccHHHHHHhhhh
Confidence 8999999753 34444444444445566777777766665555554443
No 296
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=24.86 E-value=32 Score=28.35 Aligned_cols=18 Identities=33% Similarity=0.366 Sum_probs=13.0
Q ss_pred EEEccCCCchhHHHHHHH
Q 009500 176 LVSANTGSGKTASFLVPV 193 (533)
Q Consensus 176 li~a~TGsGKT~~~llp~ 193 (533)
+..+.-|.|||+.+.-.+
T Consensus 7 v~~~kGGvGKTtia~nLA 24 (237)
T d1g3qa_ 7 IVSGKGGTGKTTVTANLS 24 (237)
T ss_dssp EECSSTTSSHHHHHHHHH
T ss_pred EECCCCCCcHHHHHHHHH
Confidence 345778999998766544
No 297
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.57 E-value=16 Score=27.98 Aligned_cols=13 Identities=38% Similarity=0.460 Sum_probs=12.2
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|++|+|||.
T Consensus 3 I~liG~~nvGKSS 15 (166)
T d2qtvb1 3 LLFLGLDNAGKTT 15 (166)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999997
No 298
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=24.37 E-value=14 Score=29.46 Aligned_cols=14 Identities=36% Similarity=0.612 Sum_probs=12.9
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|++|+|||.
T Consensus 19 KI~lvG~~~vGKTs 32 (182)
T d1moza_ 19 RILILGLDGAGKTT 32 (182)
T ss_dssp EEEEEEETTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 48999999999997
No 299
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.17 E-value=14 Score=29.18 Aligned_cols=13 Identities=38% Similarity=0.611 Sum_probs=12.1
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|+.|+|||.
T Consensus 5 i~lvG~~~vGKTs 17 (168)
T d2atva1 5 LAIFGRAGVGKSA 17 (168)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999997
No 300
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.10 E-value=16 Score=29.22 Aligned_cols=13 Identities=46% Similarity=0.736 Sum_probs=12.2
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|++|+|||.
T Consensus 8 i~ivG~~~vGKTs 20 (186)
T d2f7sa1 8 LLALGDSGVGKTT 20 (186)
T ss_dssp EEEESCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999997
No 301
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.96 E-value=15 Score=28.70 Aligned_cols=13 Identities=31% Similarity=0.606 Sum_probs=12.2
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|..|+|||.
T Consensus 5 v~liG~~~vGKTs 17 (165)
T d1z06a1 5 IIVIGDSNVGKTC 17 (165)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999997
No 302
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.49 E-value=15 Score=29.03 Aligned_cols=13 Identities=31% Similarity=0.685 Sum_probs=12.2
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|+.|+|||.
T Consensus 6 ivvvG~~~vGKTs 18 (173)
T d2a5ja1 6 YIIIGDTGVGKSC 18 (173)
T ss_dssp EEEESSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999997
No 303
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.21 E-value=18 Score=28.30 Aligned_cols=13 Identities=31% Similarity=0.567 Sum_probs=12.2
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|++|+|||.
T Consensus 5 v~liG~~~vGKSs 17 (164)
T d1z2aa1 5 MVVVGNGAVGKSS 17 (164)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999997
No 304
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=23.06 E-value=31 Score=29.36 Aligned_cols=21 Identities=14% Similarity=0.169 Sum_probs=15.0
Q ss_pred EEEEccCCCchhHHHHHHHHH
Q 009500 175 LLVSANTGSGKTASFLVPVIS 195 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l~ 195 (533)
+.+++.=|.|||+++...+..
T Consensus 4 Iai~gKGGvGKTT~a~nLA~~ 24 (269)
T d1cp2a_ 4 VAIYGKGGIGKSTTTQNLTSG 24 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHH
T ss_pred EEEECCCcCCHHHHHHHHHHH
Confidence 456778899999987654443
No 305
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.95 E-value=15 Score=29.00 Aligned_cols=13 Identities=38% Similarity=0.749 Sum_probs=12.0
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|++|+|||.
T Consensus 6 i~vvG~~~vGKTs 18 (170)
T d1i2ma_ 6 LVLVGDGGTGKTT 18 (170)
T ss_dssp EEEEECTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7889999999997
No 306
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.86 E-value=18 Score=28.42 Aligned_cols=13 Identities=31% Similarity=0.470 Sum_probs=12.1
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|.+|+|||.
T Consensus 5 i~viG~~~vGKTs 17 (171)
T d2erxa1 5 VAVFGAGGVGKSS 17 (171)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999997
No 307
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=22.82 E-value=20 Score=31.26 Aligned_cols=17 Identities=24% Similarity=0.444 Sum_probs=15.0
Q ss_pred CcEEEEccCCCchhHHH
Q 009500 173 KSLLVSANTGSGKTASF 189 (533)
Q Consensus 173 ~~vli~a~TGsGKT~~~ 189 (533)
||+.+.|..|+|||...
T Consensus 7 Rni~i~gh~~~GKTtL~ 23 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTT 23 (276)
T ss_dssp EEEEEEECTTSCHHHHH
T ss_pred eEEEEEeCCCCCHHHHH
Confidence 68999999999999843
No 308
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=22.80 E-value=16 Score=28.35 Aligned_cols=14 Identities=14% Similarity=0.541 Sum_probs=12.7
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|++|+|||.
T Consensus 3 kI~lvG~~nvGKSs 16 (161)
T d2gj8a1 3 KVVIAGRPNAGKSS 16 (161)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 57899999999997
No 309
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=22.63 E-value=43 Score=27.39 Aligned_cols=18 Identities=28% Similarity=0.230 Sum_probs=13.6
Q ss_pred EEEccCCCchhHHHHHHH
Q 009500 176 LVSANTGSGKTASFLVPV 193 (533)
Q Consensus 176 li~a~TGsGKT~~~llp~ 193 (533)
+..+.=|.|||+++.-.+
T Consensus 6 v~s~KGGvGKTtia~nlA 23 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLG 23 (232)
T ss_dssp EEESSSCSCHHHHHHHHH
T ss_pred EECCCCCChHHHHHHHHH
Confidence 556888999999776444
No 310
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=22.49 E-value=18 Score=28.64 Aligned_cols=13 Identities=15% Similarity=0.396 Sum_probs=12.1
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+.+.|.+|+|||.
T Consensus 8 I~lvG~~~~GKSS 20 (178)
T d1wf3a1 8 VAIVGKPNVGKST 20 (178)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7889999999997
No 311
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=22.34 E-value=1.5e+02 Score=24.61 Aligned_cols=59 Identities=17% Similarity=0.307 Sum_probs=41.2
Q ss_pred CCCEEEEEcCcccHHHHHHHHHhhcCCeEEEEcCCCCHHH-HHHHHHHHhc--CCCcEEEEec
Q 009500 381 TPPAVVYVGSRLGADLLSNAISVTTGMKALSIHGEKPMKE-RREIMRSFLV--GEVPVIVATG 440 (533)
Q Consensus 381 ~~~~lIF~~s~~~~~~l~~~l~~~~~~~~~~ih~~~~~~~-r~~~~~~f~~--g~~~VLvaT~ 440 (533)
+..+++.-.+...++.+++.++ ..+..+..+..+++..+ -...++...+ |.+++||...
T Consensus 34 Ga~V~~~~r~~~~l~~~~~~l~-~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnna 95 (251)
T d2c07a1 34 VSHVICISRTQKSCDSVVDEIK-SFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNA 95 (251)
T ss_dssp SSEEEEEESSHHHHHHHHHHHH-TTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred CCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeecc
Confidence 4466666667778888888887 66778888999987543 3333333322 8899999854
No 312
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Probab=22.30 E-value=53 Score=26.23 Aligned_cols=79 Identities=14% Similarity=0.112 Sum_probs=45.6
Q ss_pred hCCCcEEEEccC-CCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCC
Q 009500 170 LSGKSLLVSANT-GSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGD 248 (533)
Q Consensus 170 ~~g~~vli~a~T-GsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~ 248 (533)
++|+.++|.+.+ |-|+-++-.+ . ..+.+++++.-+.+-+.+..+++..... ...... ..
T Consensus 21 l~gK~vlItGasgGIG~~ia~~l------a---------~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~--d~ 80 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAALL------A---------GEGAEVVLCGRKLDKAQAAADSVNKRFK---VNVTAA--ET 80 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHH------H---------HTTCEEEEEESSHHHHHHHHHHHHHHHT---CCCEEE--EC
T ss_pred CCCCEEEEECCCHHHHHHHHHHH------H---------hhccchhhcccchHHHHHHHHHHHhccc---hhhhhh--hc
Confidence 378889998854 4566654322 1 2356677777777777777666655432 222222 22
Q ss_pred chHHHHHHHHcCCceeecCh
Q 009500 249 AMARQVYRIQQGVELIVGTP 268 (533)
Q Consensus 249 ~~~~~~~~l~~~~~Iiv~Tp 268 (533)
....+......+.+|+|.+-
T Consensus 81 ~~~~~~~~~~~~iDilin~A 100 (191)
T d1luaa1 81 ADDASRAEAVKGAHFVFTAG 100 (191)
T ss_dssp CSHHHHHHHTTTCSEEEECC
T ss_pred ccHHHHHHHhcCcCeeeecC
Confidence 23344555566788887653
No 313
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.26 E-value=17 Score=28.49 Aligned_cols=14 Identities=36% Similarity=0.586 Sum_probs=12.6
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|+.|+|||.
T Consensus 5 Ki~lvG~~~vGKTs 18 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSA 18 (167)
T ss_dssp EEEEECCTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 47899999999997
No 314
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=22.22 E-value=18 Score=28.18 Aligned_cols=14 Identities=36% Similarity=0.294 Sum_probs=12.6
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|+.|+|||.
T Consensus 4 ki~i~G~~~~GKTs 17 (164)
T d1zd9a1 4 ELTLVGLQYSGKTT 17 (164)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999997
No 315
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=22.12 E-value=14 Score=29.42 Aligned_cols=15 Identities=13% Similarity=0.217 Sum_probs=13.1
Q ss_pred cEEEEccCCCchhHH
Q 009500 174 SLLVSANTGSGKTAS 188 (533)
Q Consensus 174 ~vli~a~TGsGKT~~ 188 (533)
++.+.|.+|+|||..
T Consensus 3 ~VaivG~~nvGKSTL 17 (180)
T d1udxa2 3 DVGLVGYPNAGKSSL 17 (180)
T ss_dssp SEEEECCGGGCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 478899999999983
No 316
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.86 E-value=19 Score=28.47 Aligned_cols=13 Identities=46% Similarity=0.831 Sum_probs=12.2
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|..|+|||.
T Consensus 8 I~lvG~~~vGKTs 20 (174)
T d2bmea1 8 FLVIGNAGTGKSC 20 (174)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999996
No 317
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=21.60 E-value=2e+02 Score=23.46 Aligned_cols=127 Identities=9% Similarity=0.081 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHh--CCCcEEEEccCCCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhc
Q 009500 158 PTPVQMQAIPSAL--SGKSLLVSANTGSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGK 235 (533)
Q Consensus 158 p~~~Q~~~i~~i~--~g~~vli~a~TGsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~ 235 (533)
..|.|-+.+..+. .+-.-++.-.|+.|-++.++.-.+ ..+.+++-+-...+.+....+.+++.
T Consensus 43 ~~~~~g~~L~~L~~~~~~k~iLEiGT~~GyStl~la~al-------------~~~g~v~tie~~~~~~~~A~~~~~~~-- 107 (227)
T d1susa1 43 TSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAI-------------PEDGKILAMDINKENYELGLPVIKKA-- 107 (227)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCGGGHHHHHHHHHS-------------CTTCEEEEEESCCHHHHHHHHHHHHT--
T ss_pred cCHHHHHHHHHHHHhcCCCcEEEecchhhhhHHHHHhhC-------------CCCcEEEEEeccchhHHHHHHHHHHh--
Confidence 4577777776654 344567788899999987654332 23455666666555544333334332
Q ss_pred CCCCeEEEEEcCCchHHHHHHHHcCCceeecChHHHHHHHHcCCCCCCCeeEEEEeccchhhhcchHHHHHHHHHhCCCC
Q 009500 236 GLPFKTALVVGGDAMARQVYRIQQGVELIVGTPGRLIDLLMKHDIELDDIRMFVLDEVDCMLQRGFRDQVMQIFRAISLP 315 (533)
Q Consensus 236 ~~~~~~~~~~gg~~~~~~~~~l~~~~~Iiv~Tp~~l~~~l~~~~~~l~~i~~vVvDEah~~~~~~~~~~i~~i~~~~~~~ 315 (533)
++. ...+++++.....+.-+.........+++|.+|=.|. .+...+..+...+++.
T Consensus 108 --g~~------------------~~i~~~~g~a~~~L~~l~~~~~~~~~fD~iFiDa~k~----~y~~~~e~~~~ll~~g 163 (227)
T d1susa1 108 --GVD------------------HKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKD----NYLNYHKRLIDLVKVG 163 (227)
T ss_dssp --TCG------------------GGEEEEESCHHHHHHHHHHCGGGTTCBSEEEECSCST----THHHHHHHHHHHBCTT
T ss_pred --ccc------------------cceeeeehHHHHHHHHHHhccccCCceeEEEeccchh----hhHHHHHHHHhhcCCC
Confidence 210 1134555555444444433332345689999985442 3455666666666665
Q ss_pred cEEEeccc
Q 009500 316 QILMYSAT 323 (533)
Q Consensus 316 q~i~~SAT 323 (533)
-+|.+=-+
T Consensus 164 Giii~DNv 171 (227)
T d1susa1 164 GVIGYDNT 171 (227)
T ss_dssp CCEEEETT
T ss_pred cEEEEccC
Confidence 55554433
No 318
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=21.33 E-value=23 Score=29.30 Aligned_cols=43 Identities=21% Similarity=0.324 Sum_probs=23.7
Q ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHhCC---Cc-EEEEccCCCchhHH
Q 009500 144 QKLLQNIEAAGYDMPTPVQMQAIPSALSG---KS-LLVSANTGSGKTAS 188 (533)
Q Consensus 144 ~~l~~~l~~~g~~~p~~~Q~~~i~~i~~g---~~-vli~a~TGsGKT~~ 188 (533)
..+.+-|+-.|.... ++ ..++..++.| ++ +++.||+++|||+.
T Consensus 23 ~~I~~~l~~q~i~~~-~F-l~~l~~~l~~~PKkn~i~~~GP~~TGKS~f 69 (205)
T d1tuea_ 23 RPIVQFLRYQQIEFI-TF-LGALKSFLKGTPKKNCLVFCGPANTGKSYF 69 (205)
T ss_dssp HHHHHHHHHTTCCHH-HH-HHHHHHHHHTCTTCSEEEEESCGGGCHHHH
T ss_pred HHHHHHHHhcCccHH-HH-HHHHHHHHcCCCCceEEEEECCCCccHHHH
Confidence 455555654444311 11 1233334433 33 67799999999984
No 319
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.31 E-value=19 Score=28.49 Aligned_cols=14 Identities=29% Similarity=0.548 Sum_probs=12.5
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
-+++.|+.|+|||.
T Consensus 4 KivvvG~~~vGKTs 17 (177)
T d1kmqa_ 4 KLVIVGDGACGKTC 17 (177)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 47889999999996
No 320
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.31 E-value=1.5e+02 Score=24.42 Aligned_cols=79 Identities=14% Similarity=0.213 Sum_probs=48.5
Q ss_pred hCCCcEEEEccC-CCchhHHHHHHHHHHHHhhhhcccCCCCCceEEEEcccHHHHHHHHHHHHHHhcCCCCeEEEEEcCC
Q 009500 170 LSGKSLLVSANT-GSGKTASFLVPVISQCANIRLHHSQNQKNPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVVGGD 248 (533)
Q Consensus 170 ~~g~~vli~a~T-GsGKT~~~llp~l~~l~~~~~~~~~~~~~~~~Lil~Ptr~L~~Q~~~~~~~~~~~~~~~~~~~~gg~ 248 (533)
++|+.++|.+.+ |-|+.++..+. ..|-+++++.-+.+-+.++.++++.. +.+...+....
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la---------------~~G~~V~l~~r~~~~l~~~~~~~~~~----~~~~~~~~~Dv 65 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFA---------------KLKSKLVLWDINKHGLEETAAKCKGL----GAKVHTFVVDC 65 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH---------------HTTCEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH---------------HCCCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEEeeC
Confidence 478888886654 47777754332 24667888887777777777777654 34566666666
Q ss_pred chHHHHHHHH-------cCCceeecC
Q 009500 249 AMARQVYRIQ-------QGVELIVGT 267 (533)
Q Consensus 249 ~~~~~~~~l~-------~~~~Iiv~T 267 (533)
...+....+. ...+++|..
T Consensus 66 s~~~~v~~~~~~i~~~~g~idilinn 91 (244)
T d1yb1a_ 66 SNREDIYSSAKKVKAEIGDVSILVNN 91 (244)
T ss_dssp TCHHHHHHHHHHHHHHTCCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCceeEee
Confidence 6555444332 235666554
No 321
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=21.08 E-value=65 Score=27.55 Aligned_cols=42 Identities=17% Similarity=0.270 Sum_probs=26.3
Q ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHhCC----Cc-EEEEccCCCchhHH
Q 009500 145 KLLQNIEAAGYDMPTPVQMQAIPSALSG----KS-LLVSANTGSGKTAS 188 (533)
Q Consensus 145 ~l~~~l~~~g~~~p~~~Q~~~i~~i~~g----~~-vli~a~TGsGKT~~ 188 (533)
.+.+-|+-.|+ .|..+.. ++-.++.+ ++ +++.||.++|||+.
T Consensus 74 ~i~~~l~~q~~-~~~~f~~-~l~~~L~~~~~k~n~~~l~G~~~tGKS~f 120 (267)
T d1u0ja_ 74 RIYKILELNGY-DPQYAAS-VFLGWATKKFGKRNTIWLFGPATTGKTNI 120 (267)
T ss_dssp HHHHHHHHTTC-CHHHHHH-HHHHHHTTCSTTCCEEEEECSTTSSHHHH
T ss_pred HHHHHHHHcCc-CHHHHHH-HHHHHHcCCCCccEEEEEEcCCCCCHHHH
Confidence 35555655565 3445554 45555533 34 57789999999984
No 322
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.01 E-value=19 Score=28.36 Aligned_cols=14 Identities=21% Similarity=0.487 Sum_probs=12.6
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|..|+|||.
T Consensus 8 Ki~vvG~~~vGKTs 21 (170)
T d1r2qa_ 8 KLVLLGESAVGKSS 21 (170)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 37899999999997
No 323
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=21.00 E-value=38 Score=29.14 Aligned_cols=20 Identities=20% Similarity=0.189 Sum_probs=14.4
Q ss_pred EEEEccCCCchhHHHHHHHH
Q 009500 175 LLVSANTGSGKTASFLVPVI 194 (533)
Q Consensus 175 vli~a~TGsGKT~~~llp~l 194 (533)
+.+.+.=|.|||+++.-.+.
T Consensus 5 IaisgKGGVGKTT~a~NLA~ 24 (289)
T d2afhe1 5 CAIYGKGGIGKSTTTQNLVA 24 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 45577889999997664443
No 324
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.79 E-value=18 Score=28.48 Aligned_cols=14 Identities=43% Similarity=0.646 Sum_probs=12.7
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|..|+|||.
T Consensus 7 Ki~lvG~~~vGKTs 20 (171)
T d2erya1 7 RLVVVGGGGVGKSA 20 (171)
T ss_dssp EEEEEECTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 38999999999997
No 325
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.70 E-value=20 Score=28.28 Aligned_cols=14 Identities=43% Similarity=0.653 Sum_probs=12.6
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|..|+|||.
T Consensus 8 Kv~lvG~~~vGKTs 21 (173)
T d2fn4a1 8 KLVVVGGGGVGKSA 21 (173)
T ss_dssp EEEEEECTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 37999999999996
No 326
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}
Probab=20.70 E-value=2.5e+02 Score=24.45 Aligned_cols=11 Identities=36% Similarity=0.347 Sum_probs=9.0
Q ss_pred EEEEeccchhh
Q 009500 287 MFVLDEVDCML 297 (533)
Q Consensus 287 ~vVvDEah~~~ 297 (533)
+||.||+|.-+
T Consensus 199 ~ii~De~y~~~ 209 (382)
T d1b5pa_ 199 YLVSDEIYEHL 209 (382)
T ss_dssp EEEEECTTTTC
T ss_pred EEEEEccccce
Confidence 69999999754
No 327
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=20.52 E-value=22 Score=28.29 Aligned_cols=14 Identities=14% Similarity=0.181 Sum_probs=12.7
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
++.+.|++++|||.
T Consensus 3 ~VaiiG~~nvGKSS 16 (185)
T d1lnza2 3 DVGLVGFPSVGKST 16 (185)
T ss_dssp CEEEESSTTSSHHH
T ss_pred eEEEECCCCCCHHH
Confidence 57899999999998
No 328
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.52 E-value=22 Score=27.84 Aligned_cols=13 Identities=23% Similarity=0.360 Sum_probs=12.1
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|..|+|||.
T Consensus 6 ivlvG~~~vGKTs 18 (167)
T d1z08a1 6 VVLLGEGCVGKTS 18 (167)
T ss_dssp EEEECCTTSCHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999997
No 329
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.46 E-value=22 Score=28.13 Aligned_cols=13 Identities=23% Similarity=0.626 Sum_probs=12.3
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|+.|+|||.
T Consensus 7 i~vvG~~~vGKTs 19 (175)
T d2f9la1 7 VVLIGDSGVGKSN 19 (175)
T ss_dssp EEEESSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999997
No 330
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.34 E-value=20 Score=28.27 Aligned_cols=13 Identities=46% Similarity=0.746 Sum_probs=12.0
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|..|+|||.
T Consensus 7 i~lvG~~~vGKTs 19 (169)
T d1x1ra1 7 LVVVGDGGVGKSA 19 (169)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7889999999997
No 331
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=20.28 E-value=21 Score=28.09 Aligned_cols=14 Identities=29% Similarity=0.434 Sum_probs=12.8
Q ss_pred cEEEEccCCCchhH
Q 009500 174 SLLVSANTGSGKTA 187 (533)
Q Consensus 174 ~vli~a~TGsGKT~ 187 (533)
.+++.|+.|+|||.
T Consensus 18 kI~vvG~~~vGKSs 31 (176)
T d1fzqa_ 18 RILLLGLDNAGKTT 31 (176)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 48999999999997
No 332
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=20.25 E-value=30 Score=30.06 Aligned_cols=20 Identities=30% Similarity=0.338 Sum_probs=17.1
Q ss_pred hCCCcEEEEccCCCchhHHH
Q 009500 170 LSGKSLLVSANTGSGKTASF 189 (533)
Q Consensus 170 ~~g~~vli~a~TGsGKT~~~ 189 (533)
-.|+.+.|.++.|+|||...
T Consensus 65 g~GQr~~Ifg~~g~GKt~l~ 84 (276)
T d1fx0a3 65 GRGQRELIIGDRQTGKTAVA 84 (276)
T ss_dssp BTTCBCBEEESSSSSHHHHH
T ss_pred cCCceEeeccCCCCChHHHH
Confidence 37888999999999999743
No 333
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.17 E-value=20 Score=28.03 Aligned_cols=13 Identities=23% Similarity=0.606 Sum_probs=12.1
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|+.|+|||.
T Consensus 7 ivlvG~~~vGKTs 19 (166)
T d1z0fa1 7 YIIIGDMGVGKSC 19 (166)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999997
No 334
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.16 E-value=20 Score=28.24 Aligned_cols=13 Identities=31% Similarity=0.739 Sum_probs=12.1
Q ss_pred EEEEccCCCchhH
Q 009500 175 LLVSANTGSGKTA 187 (533)
Q Consensus 175 vli~a~TGsGKT~ 187 (533)
+++.|+.|+|||.
T Consensus 5 i~~vG~~~vGKSs 17 (175)
T d1ky3a_ 5 VIILGDSGVGKTS 17 (175)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 6899999999997
Done!