Your job contains 1 sequence.
>009501
MGQRNMPCTSQMIDLEMDQQNRGYLLPEPCVVLGGVTSFPQPMQTIVRASGNTSSLDAHQ
HYDSAMFYGMPQYHGVHHHHAASVDLGASTASNLYVPYMPTLSSGMPVNHGSTDQLPSSR
NFGVIGASAEEYGRNSHFMDNVRGSYKRKNTEGFPGSFQNLNAPASSSSSVAPLHPRHPD
GVTPMDAACFSLPQYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAHSHNHFIQGNFIG
QPFQPAGWLEQPSDGGGSSWTQAPAIPYMHGSNVSGAPMDSGNMVVQRYPETAGNRNSST
FLQPPVNIQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPR
HMGPVPPTGFRIYRSPREGPVPEALRQRSLPHLRVLPSDGVALLEIPDFYEVGNFIDRHR
DMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQE
PGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALATKS
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009501
(533 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2009660 - symbol:AT1G53190 species:3702 "Arabi... 710 1.4e-97 2
TAIR|locus:2086305 - symbol:AT3G15070 species:3702 "Arabi... 522 7.7e-70 2
TAIR|locus:2124271 - symbol:MBR2 "MED25 BINDING RING-H2 P... 341 8.7e-30 2
TAIR|locus:2125284 - symbol:AT4G31450 species:3702 "Arabi... 324 5.1e-27 1
TAIR|locus:2160031 - symbol:AT5G42940 species:3702 "Arabi... 328 6.7e-27 2
TAIR|locus:2159634 - symbol:AT5G10650 species:3702 "Arabi... 321 2.0e-26 2
TAIR|locus:2028225 - symbol:AT1G45180 species:3702 "Arabi... 321 4.1e-26 1
TAIR|locus:2149378 - symbol:AT5G24870 species:3702 "Arabi... 312 2.0e-25 1
TAIR|locus:2027804 - symbol:AT1G73760 species:3702 "Arabi... 262 7.2e-21 1
TAIR|locus:2030933 - symbol:AT1G17970 species:3702 "Arabi... 250 3.9e-19 1
TAIR|locus:504955576 - symbol:BB "BIG BROTHER" species:37... 208 4.9e-16 1
TAIR|locus:2155513 - symbol:AT5G67120 species:3702 "Arabi... 203 1.7e-15 1
TAIR|locus:2092271 - symbol:AT3G19910 species:3702 "Arabi... 215 4.1e-15 1
TAIR|locus:2075641 - symbol:AT3G47180 species:3702 "Arabi... 196 9.9e-15 1
TAIR|locus:2145086 - symbol:AT5G52140 species:3702 "Arabi... 202 1.3e-14 1
ZFIN|ZDB-GENE-060929-604 - symbol:rnf44 "ring finger prot... 170 4.2e-10 2
UNIPROTKB|F6QF09 - symbol:RNF122 "Uncharacterized protein... 150 9.1e-10 1
DICTYBASE|DDB_G0282479 - symbol:DDB_G0282479 "E3 ubiquiti... 166 1.6e-09 1
RGD|1307212 - symbol:Rnf44 "ring finger protein 44" speci... 167 1.6e-09 1
UNIPROTKB|Q4V7B8 - symbol:Rnf44 "RING finger protein 44" ... 167 1.6e-09 1
UNIPROTKB|F1RX76 - symbol:RNF122 "Uncharacterized protein... 147 1.9e-09 1
MGI|MGI:2145310 - symbol:Rnf44 "ring finger protein 44" s... 166 3.1e-09 1
UNIPROTKB|F1NND0 - symbol:RNF38 "Uncharacterized protein"... 167 3.3e-09 2
UNIPROTKB|F1S3A0 - symbol:RNF44 "Uncharacterized protein"... 159 5.2e-09 2
TAIR|locus:2203063 - symbol:AT1G36950 species:3702 "Arabi... 154 5.8e-09 1
TAIR|locus:2126906 - symbol:AT4G00070 species:3702 "Arabi... 142 6.6e-09 1
FB|FBgn0037705 - symbol:mura "murashka" species:7227 "Dro... 148 7.1e-09 3
UNIPROTKB|F1P2A5 - symbol:RNF111 "Uncharacterized protein... 150 7.8e-09 3
UNIPROTKB|F1N0G7 - symbol:RNF44 "Uncharacterized protein"... 159 8.0e-09 2
ZFIN|ZDB-GENE-030616-560 - symbol:si:dkey-51a16.9 "si:dke... 141 8.5e-09 1
UNIPROTKB|Q9H9V4 - symbol:RNF122 "RING finger protein 122... 140 1.1e-08 1
UNIPROTKB|B4DYE0 - symbol:RNF44 "cDNA FLJ61466, highly si... 159 1.3e-08 2
UNIPROTKB|F1PLL1 - symbol:RNF38 "Uncharacterized protein"... 160 1.6e-08 2
UNIPROTKB|Q5XIX1 - symbol:Rnf38 "Rnf38 protein" species:1... 160 1.6e-08 2
ZFIN|ZDB-GENE-030131-8693 - symbol:si:dkey-20n3.1 "si:dke... 162 1.6e-08 4
UNIPROTKB|F1Q2J1 - symbol:RNF122 "Uncharacterized protein... 138 1.8e-08 1
MGI|MGI:1916117 - symbol:Rnf122 "ring finger protein 122"... 138 1.8e-08 1
RGD|1561238 - symbol:RGD1561238 "similar to ring finger p... 138 1.8e-08 1
UNIPROTKB|Q3SZS9 - symbol:RNF38 "Uncharacterized protein"... 160 2.0e-08 2
ZFIN|ZDB-GENE-060526-65 - symbol:si:ch211-188g24.2 "si:ch... 158 2.0e-08 1
RGD|621856 - symbol:Rnf38 "ring finger protein 38" specie... 159 2.1e-08 2
UNIPROTKB|F1LNX1 - symbol:Rnf38 "Protein Rnf38" species:1... 160 2.1e-08 2
UNIPROTKB|B1AM81 - symbol:RNF38 "RING finger protein 38" ... 160 2.2e-08 2
UNIPROTKB|F1P629 - symbol:RNF44 "Uncharacterized protein"... 159 2.2e-08 2
UNIPROTKB|F1NJF6 - symbol:RNF122 "Uncharacterized protein... 136 2.9e-08 1
UNIPROTKB|F1LPR4 - symbol:Rnf38 "Protein Rnf38" species:1... 160 3.1e-08 2
UNIPROTKB|F1ST85 - symbol:RNF38 "Uncharacterized protein"... 160 3.1e-08 2
UNIPROTKB|Q7L0R7 - symbol:RNF44 "RING finger protein 44" ... 159 3.3e-08 2
TAIR|locus:2093335 - symbol:AT3G30460 species:3702 "Arabi... 135 3.8e-08 1
UNIPROTKB|Q9H0F5 - symbol:RNF38 "RING finger protein 38" ... 160 3.8e-08 2
MGI|MGI:1920719 - symbol:Rnf38 "ring finger protein 38" s... 160 3.9e-08 2
TAIR|locus:2019150 - symbol:AT1G74620 species:3702 "Arabi... 149 5.5e-08 1
MGI|MGI:1261771 - symbol:Rnf24 "ring finger protein 24" s... 133 6.2e-08 1
RGD|1309384 - symbol:Rnf24 "ring finger protein 24" speci... 133 6.2e-08 1
UNIPROTKB|Q32LD0 - symbol:RNF24 "Ring finger protein 24" ... 132 7.9e-08 1
UNIPROTKB|E2R402 - symbol:RNF24 "Uncharacterized protein"... 132 7.9e-08 1
UNIPROTKB|Q9Y225 - symbol:RNF24 "RING finger protein 24" ... 132 7.9e-08 1
ZFIN|ZDB-GENE-080303-32 - symbol:zgc:175214 "zgc:175214" ... 130 1.3e-07 1
ZFIN|ZDB-GENE-091204-454 - symbol:si:ch1073-392o20.1 "si:... 130 1.3e-07 1
ZFIN|ZDB-GENE-041114-40 - symbol:rnf24 "ring finger prote... 129 1.7e-07 1
ZFIN|ZDB-GENE-081104-369 - symbol:rnf165b "ring finger pr... 147 2.3e-07 2
ZFIN|ZDB-GENE-040426-1277 - symbol:rnf11a "ring finger pr... 111 2.5e-07 2
UNIPROTKB|E1BSQ8 - symbol:RNF111 "Uncharacterized protein... 142 4.1e-07 3
FB|FBgn0038627 - symbol:CG7694 species:7227 "Drosophila m... 122 9.5e-07 1
TAIR|locus:2053225 - symbol:AT2G28920 species:3702 "Arabi... 122 9.5e-07 1
ZFIN|ZDB-GENE-100209-1 - symbol:rnf6 "ring finger protein... 134 1.0e-06 2
TAIR|locus:2159320 - symbol:AT5G60820 species:3702 "Arabi... 143 1.2e-06 1
ZFIN|ZDB-GENE-091118-64 - symbol:rnf165a "ring finger pro... 140 1.3e-06 1
UNIPROTKB|F1RPS5 - symbol:RNF165 "Uncharacterized protein... 140 1.5e-06 1
UNIPROTKB|I3LPH2 - symbol:RNF165 "Uncharacterized protein... 140 1.5e-06 1
UNIPROTKB|F1MJP2 - symbol:RNF165 "Uncharacterized protein... 140 1.5e-06 2
GENEDB_PFALCIPARUM|PF14_0215 - symbol:PF14_0215 "hypothet... 143 1.6e-06 1
UNIPROTKB|Q8ILM8 - symbol:PF14_0215 "Putative uncharacter... 143 1.6e-06 1
UNIPROTKB|Q6ZSG1 - symbol:RNF165 "RING finger protein 165... 140 1.7e-06 1
UNIPROTKB|E2R7H1 - symbol:RNF111 "Uncharacterized protein... 152 1.8e-06 3
UNIPROTKB|Q5R476 - symbol:RNF111 "E3 ubiquitin-protein li... 152 1.8e-06 3
ASPGD|ASPL0000004006 - symbol:AN10760 species:162425 "Eme... 127 1.9e-06 2
TAIR|locus:2034934 - symbol:AT1G18770 species:3702 "Arabi... 119 2.0e-06 1
MGI|MGI:2444521 - symbol:Rnf165 "ring finger protein 165"... 139 2.2e-06 1
RGD|1560744 - symbol:Rnf165 "ring finger protein 165" spe... 139 2.2e-06 1
UNIPROTKB|F1PHU2 - symbol:RNF165 "Uncharacterized protein... 141 2.3e-06 2
RGD|1310097 - symbol:Rnf111 "ring finger protein 111" spe... 144 2.4e-06 2
DICTYBASE|DDB_G0268162 - symbol:DDB_G0268162 species:4468... 129 2.8e-06 2
TAIR|locus:2154729 - symbol:AT5G53910 species:3702 "Arabi... 133 3.0e-06 1
TAIR|locus:2034210 - symbol:AT1G80400 species:3702 "Arabi... 139 3.0e-06 1
UNIPROTKB|F1S053 - symbol:RNF111 "Uncharacterized protein... 144 3.1e-06 2
TAIR|locus:4010713708 - symbol:AT2G44578 "AT2G44578" spec... 117 3.3e-06 1
TAIR|locus:2038766 - symbol:RHA2B "RING-H2 finger protein... 117 3.3e-06 1
UNIPROTKB|E1BCM3 - symbol:RNF215 "Uncharacterized protein... 138 3.4e-06 1
TAIR|locus:2103162 - symbol:DAFL1 "DAF-Like gene 1" speci... 126 3.5e-06 1
TAIR|locus:2074678 - symbol:AT3G11110 species:3702 "Arabi... 116 4.2e-06 1
UNIPROTKB|C9IY58 - symbol:RNF13 "E3 ubiquitin-protein lig... 132 4.2e-06 1
UNIPROTKB|C9JCY0 - symbol:RNF13 "E3 ubiquitin-protein lig... 132 4.3e-06 1
ZFIN|ZDB-GENE-101206-1 - symbol:wu:fb39e10 "wu:fb39e10" s... 128 4.4e-06 2
TAIR|locus:2050522 - symbol:AT2G44330 species:3702 "Arabi... 125 4.5e-06 1
TAIR|locus:2200610 - symbol:AT1G26800 species:3702 "Arabi... 129 4.8e-06 1
TAIR|locus:2195871 - symbol:AT1G51930 species:3702 "Arabi... 115 5.4e-06 1
MGI|MGI:1918923 - symbol:Rnf215 "ring finger protein 215"... 136 5.7e-06 1
TAIR|locus:2125364 - symbol:AT4G35840 species:3702 "Arabi... 131 5.9e-06 1
TAIR|locus:2195077 - symbol:AT1G12760 species:3702 "Arabi... 136 6.6e-06 1
WARNING: Descriptions of 174 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2009660 [details] [associations]
symbol:AT1G53190 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT020580 EMBL:BT029187
IPI:IPI00525716 RefSeq:NP_001031177.1 RefSeq:NP_175727.2
UniGene:At.43317 ProteinModelPortal:Q5EAI9 SMR:Q5EAI9 PRIDE:Q5EAI9
EnsemblPlants:AT1G53190.1 EnsemblPlants:AT1G53190.2 GeneID:841753
KEGG:ath:AT1G53190 TAIR:At1g53190 HOGENOM:HOG000238152
InParanoid:Q5EAI9 OMA:TLDCGHE PhylomeDB:Q5EAI9
ProtClustDB:CLSN2688389 Genevestigator:Q5EAI9 Uniprot:Q5EAI9
Length = 494
Score = 710 (255.0 bits), Expect = 1.4e-97, Sum P(2) = 1.4e-97
Identities = 173/341 (50%), Positives = 207/341 (60%)
Query: 213 RNRLVATGGMDPVL-AHSHNHFIQGNFIGQ-PFQPAG--WLEQP---SDGGGSSWTQAPA 265
RNR A ++ VL +H+ N+FIQGN+ G PF P G W +Q SDG S W P
Sbjct: 165 RNRPGAVT-VNTVLPSHAPNNFIQGNYAGHHPFPPPGSMWYDQHHGRSDGSPSFW---PT 220
Query: 266 IPYMHGSNVSGAPMDSGNMVVQRYPETAGNRNSSTFLQP----PVNIQHLSFPHP-PPPF 320
PYMHGSN+ ++S + RN ++F+ P P + + HP PPP
Sbjct: 221 -PYMHGSNIFAGSIESSS------------RNPTSFMYPSQLNPRDHYYSHHHHPAPPPV 267
Query: 321 QGIRNHNTNVHPQVAA-ASFRVP-SSY---RTMNISQDGSEMVPRHMGPVPPTGFRIYRS 375
QG+R N ++P A+ AS+RVP S+ TMN GSEM HMGPV PTGFRIY+
Sbjct: 268 QGMRGQNATLYPHTASSASYRVPPGSFTPQNTMNSGPLGSEMGSSHMGPVQPTGFRIYQH 327
Query: 376 -PREGPVPEA-LRQR--SLPHLRVLPSDGVALLEIPDFY--EVGNFIDRHRDMRLDIEDM 429
R+ VP A LRQ +P LRV+P D VALLE DF N ID HRDMRLDIE+M
Sbjct: 328 HQRDDSVPVATLRQHRGGVPRLRVMPDDEVALLEFGDFLGGSGNNHIDHHRDMRLDIEEM 387
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYIN-LEEPASKDQEPGSCIICQ 488
SYEELLAL ERIG VNTGL EE V LKTR S N+ P +KD E C ICQ
Sbjct: 388 SYEELLALSERIGTVNTGLPEEDVKNHLKTRT-CSGINFEKESSSPRTKDLETEPCTICQ 446
Query: 489 EDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
E +++ EKI TLDC HEYHAECL+KWL +KNVCPICKSEAL
Sbjct: 447 ESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEAL 487
Score = 279 (103.3 bits), Expect = 1.4e-97, Sum P(2) = 1.4e-97
Identities = 85/211 (40%), Positives = 112/211 (53%)
Query: 1 MGQRNMPCTSQMIDLEMDQQ-NRGYLLPEPCVVLGGVTSFPQ-PMQTIVRAS-GNTSSLD 57
MGQRN + +DLEM+QQ ++ L EPC++LG SFPQ P + A + +L+
Sbjct: 1 MGQRN-----RNVDLEMEQQQSQASLQAEPCILLG---SFPQQPDNNNMPAMVAHVPNLE 52
Query: 58 AHQ----HYD-SAMFYGMPQYHGVHHHHAASVDLGASTASNLYVPYMPTLSSGMPVNHGS 112
H YD SAMFYG+PQYH HH H +N YVPY+ + P
Sbjct: 53 PHSLQDPTYDNSAMFYGLPQYH--HHPHQR-------VPTNFYVPYVAFQAP--P----- 96
Query: 113 TDQLPSSRNFGVIGASAE-EYGRNSHFMDNVRGSYKRKNTEGFPGSFQNLN---APAXXX 168
QLPSS + GV+G S + EY RN+HFMD+ RG+YKRKN EG PG Q L+ AP
Sbjct: 97 -GQLPSSSSHGVVGVSPDHEYERNAHFMDHTRGTYKRKNAEGIPGQPQYLSTLAAPFNTP 155
Query: 169 XXVAPLH-PRHPDGVTPMDAACFSLPQYRGN 198
+AP R+ G ++ LP + N
Sbjct: 156 ETIAPFGGARNRPGAVTVNTV---LPSHAPN 183
>TAIR|locus:2086305 [details] [associations]
symbol:AT3G15070 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 UniGene:At.24446
UniGene:At.70390 eggNOG:NOG291583 ProtClustDB:CLSN2688389
EMBL:AF385699 EMBL:AY143948 IPI:IPI00522513 RefSeq:NP_001189897.1
RefSeq:NP_566498.1 ProteinModelPortal:Q94F54 SMR:Q94F54
EnsemblPlants:AT3G15070.1 EnsemblPlants:AT3G15070.2 GeneID:820736
KEGG:ath:AT3G15070 OMA:TEHERNA Genevestigator:Q94F54 Uniprot:Q94F54
Length = 486
Score = 522 (188.8 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 116/217 (53%), Positives = 136/217 (62%)
Query: 317 PPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPR---HMGPVPPTGFRIY 373
P P RNH + HP P Y M + + P HMG V TGFRI
Sbjct: 266 PTPSVYQRNHYISHHPVPPP-----PIVYPHMPSASYAETLHPASYSHMGQVQSTGFRIN 320
Query: 374 RSPREGPVPEA-LRQRSLPHLRVLPSDGVALLEIPDFYEVGNFIDRHRDMRLDIEDMSYE 432
+ P E VP A LR R LPH R +P++ A E+ DFY N++D H+DMRLDIEDMSYE
Sbjct: 321 QYPGEDFVPAAILRHRELPHFRAMPANENAFWEVGDFYNAVNYVDHHQDMRLDIEDMSYE 380
Query: 433 ELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYR 492
ELLAL ++IG V TGLS E V LK R ++T INLEE S D E SC ICQE+Y+
Sbjct: 381 ELLALSDQIGTVKTGLSSEDVKELLKRR---TSTR-INLEEGPSTDLETDSCTICQENYK 436
Query: 493 DNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
+ +KI TLDC H+YHAECLKKWL IKNVCPICKSEAL
Sbjct: 437 NEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEAL 473
Score = 326 (119.8 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 99/280 (35%), Positives = 139/280 (49%)
Query: 116 LPSSRNFGVIGASAEEYGRNSHFMDNVRGSYKRKNTEGFPGSFQNLNAPAXXXXXVAPLH 175
L N V+G ++ E+ RN+HFMD+ +KRK++E PG+ Q AP
Sbjct: 99 LSHGSNDAVVGVTSTEHERNAHFMDH---GFKRKSSEVIPGNSQYPVAPCSF-------- 147
Query: 176 PRHPDGVTPMDAACFSLPQYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAHSHNHFIQ 235
P+ + + A FS P + GT + QRSVRNR A MDP+L+H HN+F Q
Sbjct: 148 PQ----LNTSETAPFSFPHF---GT--YPQPLDQRSVRNRAGAAT-MDPLLSHGHNNFSQ 197
Query: 236 GNFIGQPFQPAG--WLEQP-----SDGGGSSWTQAPAIPYMHGSNVSGAPMDSGNMVVQR 288
GN+ PF P G W +Q SDG S W+QAPA+PYMHG N++ ++SGN+ R
Sbjct: 198 GNYAAHPFPPLGSIWYDQHCNGNRSDGSSSLWSQAPAVPYMHG-NIATGSIESGNVCFPR 256
Query: 289 YPETAGNRNSS-TFLQPPVNIQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRV---PSS 344
Y ET+ +RN + + Q I H P PPPP V+P + +AS+ P+S
Sbjct: 257 YHETSSSRNPTPSVYQRNHYISH--HPVPPPPI---------VYPHMPSASYAETLHPAS 305
Query: 345 YRTMNISQDGSEMVPRHMGP--VPPTGFRIYRSPREGPVP 382
Y M Q + ++ G VP R P +P
Sbjct: 306 YSHMGQVQSTGFRINQYPGEDFVPAAILRHRELPHFRAMP 345
Score = 204 (76.9 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 60/168 (35%), Positives = 90/168 (53%)
Query: 1 MGQRNMPCTSQMIDLEMDQQNRGYLLPEPCVVLGGVTSFPQ--PMQTIVRASGNTSSLDA 58
M QRNM M +M+Q ++ ++ P P +G +P P+ T+ + SL
Sbjct: 1 MRQRNM-----MTGSDMEQNSQSFV-PHPEPRIGTNYLYPDIPPVNTVPHLEAH--SLQ- 51
Query: 59 HQHYDS-AMFYGMPQYHGVHHHHAASVDLGASTASNLYVPYMP-TLSSGMPVNHGSTDQL 116
+ YD+ +MFYG PQYH H HA+++ G STA N YVPY+ ++HGS D
Sbjct: 52 -EPYDNNSMFYGPPQYH---HQHASNLGSGMSTAPNFYVPYVNYEAPPSFLLSHGSND-- 105
Query: 117 PSSRNFGVIGASAEEYGRNSHFMDNVRGSYKRKNTEGFPGSFQNLNAP 164
V+G ++ E+ RN+HFMD+ +KRK++E PG+ Q AP
Sbjct: 106 ------AVVGVTSTEHERNAHFMDH---GFKRKSSEVIPGNSQYPVAP 144
>TAIR|locus:2124271 [details] [associations]
symbol:MBR2 "MED25 BINDING RING-H2 PROTEIN 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL021961 EMBL:AL161584
eggNOG:NOG291583 EMBL:BT015366 EMBL:BT020341 EMBL:AK229265
IPI:IPI00526499 PIR:T05432 RefSeq:NP_195130.1 UniGene:At.2085
ProteinModelPortal:O49500 SMR:O49500 PaxDb:O49500 PRIDE:O49500
EnsemblPlants:AT4G34040.1 GeneID:829550 KEGG:ath:AT4G34040
TAIR:At4g34040 HOGENOM:HOG000241085 InParanoid:O49500 OMA:DAPRINS
PhylomeDB:O49500 ProtClustDB:CLSN2683588 ArrayExpress:O49500
Genevestigator:O49500 Uniprot:O49500
Length = 666
Score = 341 (125.1 bits), Expect = 8.7e-30, Sum P(2) = 8.7e-30
Identities = 63/126 (50%), Positives = 90/126 (71%)
Query: 407 PDFYE-VGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSA 465
P Y+ + DRHRDMRLD+++MSYEELLALGERIG+V+TGLSEE++ + +K + S+
Sbjct: 549 PLIYQGMAEMHDRHRDMRLDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSS 608
Query: 466 TNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
+ +D EP C +CQE+Y + + +GTL C HE+H C+K+WL +KN+CPICK
Sbjct: 609 A------AGSHQDMEP--CCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICK 660
Query: 526 SEALAT 531
+ AL+T
Sbjct: 661 TVALST 666
Score = 53 (23.7 bits), Expect = 8.7e-30, Sum P(2) = 8.7e-30
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 89 STASNLYVPY---MP--TLSSGMPVNHGSTDQLPSSRNFGVIGASAEEYGRNSHFMDNVR 143
+T++N+ P P T SG P S+ + + N+ G S+ G + H N
Sbjct: 29 TTSNNILNPVDVQFPNNTTGSGRPTYASSSSHVVQNHNWWSFGESSSRLGPSDHLNSNGS 88
Query: 144 GSYKRKNTEGF 154
+ ++ ++G+
Sbjct: 89 KTDRQLLSDGY 99
>TAIR|locus:2125284 [details] [associations]
symbol:AT4G31450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 ProtClustDB:CLSN2690147
HOGENOM:HOG000071011 EMBL:AF424605 EMBL:BT002300 IPI:IPI00533212
RefSeq:NP_567877.1 UniGene:At.20136 ProteinModelPortal:Q944Q9
SMR:Q944Q9 EnsemblPlants:AT4G31450.1 GeneID:829272
KEGG:ath:AT4G31450 TAIR:At4g31450 InParanoid:Q944Q9 OMA:PICKATA
PhylomeDB:Q944Q9 Genevestigator:Q944Q9 Uniprot:Q944Q9
Length = 497
Score = 324 (119.1 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 58/116 (50%), Positives = 86/116 (74%)
Query: 414 NFIDRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVY-LSATNYINLE 472
+F D+HRDMRLDI++MSYEELLAL ERIG V+T L+EE +++ LKT +Y + +Y ++
Sbjct: 377 SFHDQHRDMRLDIDNMSYEELLALEERIGTVSTALTEEAISKCLKTSIYQMKPLSYGSIT 436
Query: 473 EPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
+ S ++E C ICQE+Y +++G L C+H YH +C+++WL IK+ CPICK+ A
Sbjct: 437 KSPSDNKEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATA 492
>TAIR|locus:2160031 [details] [associations]
symbol:AT5G42940 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB008264 HSSP:Q9LRB7
eggNOG:NOG291583 HOGENOM:HOG000241085 EMBL:AF462851 EMBL:BT004548
EMBL:AK319077 IPI:IPI00537347 RefSeq:NP_199108.1 UniGene:At.6527
ProteinModelPortal:Q9FMM4 SMR:Q9FMM4 IntAct:Q9FMM4 PRIDE:Q9FMM4
EnsemblPlants:AT5G42940.1 GeneID:834306 KEGG:ath:AT5G42940
TAIR:At5g42940 InParanoid:Q9FMM4 OMA:YMIANSE PhylomeDB:Q9FMM4
ProtClustDB:CLSN2681891 Genevestigator:Q9FMM4 Uniprot:Q9FMM4
Length = 691
Score = 328 (120.5 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 65/133 (48%), Positives = 92/133 (69%)
Query: 399 DGVALLEIPDFYEVGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLK 458
+ V LL ++ DR+RDMRLD+++MSYEELLAL ERIG+V TG++EE ++ +LK
Sbjct: 561 EDVMLLNHSVLFDGATGHDRYRDMRLDVDNMSYEELLALEERIGDVCTGVNEETISNRLK 620
Query: 459 TRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIK 518
R Y S N + P +D EP C +CQE+Y + E +GTL+C HE+H++C+K+WL K
Sbjct: 621 QRKYKS-----NTKSP--QDAEP--CCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQK 671
Query: 519 NVCPICKSEALAT 531
N+CPICK+ L T
Sbjct: 672 NLCPICKTTGLNT 684
Score = 42 (19.8 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 292 TAGNRNSSTFLQPPVNIQHLSFPHPPPP 319
T GN NS++ + + S P PPPP
Sbjct: 401 TNGNLNSASSVSRTGSTT--SVPPPPPP 426
Score = 39 (18.8 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 21 NRGYLLPEPCVVLGG--VTSFPQPMQTIVRASGNTSSLDAHQ 60
NR Y P G V P P++ + AS S L Q
Sbjct: 500 NRAYSRAGPLFDRQGDSVVGIPHPLRALAAASRGRSRLMVSQ 541
Score = 38 (18.4 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 311 LSFPHPPPPFQGIRNHNTNVH 331
L+F H G+ +H N+H
Sbjct: 15 LNFEHGSSSSNGVIDHWENIH 35
>TAIR|locus:2159634 [details] [associations]
symbol:AT5G10650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006914 "autophagy" evidence=RCA] [GO:0007165
"signal transduction" evidence=RCA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0010260 "organ senescence"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT015918 EMBL:BT020582
IPI:IPI00534438 RefSeq:NP_001031869.1 RefSeq:NP_196626.2
UniGene:At.32350 ProteinModelPortal:Q5XEP8 SMR:Q5XEP8
EnsemblPlants:AT5G10650.1 EnsemblPlants:AT5G10650.2 GeneID:830929
KEGG:ath:AT5G10650 TAIR:At5g10650 InParanoid:Q5XEP8 OMA:ISSHGNG
PhylomeDB:Q5XEP8 ProtClustDB:CLSN2690147 Genevestigator:Q5XEP8
Uniprot:Q5XEP8
Length = 525
Score = 321 (118.1 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 85/228 (37%), Positives = 122/228 (53%)
Query: 314 PHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHMGP----VPPTG 369
PHP P T+ +P ++ + SS ++ + GS P P V G
Sbjct: 316 PHPTTP--------TDPNPSLSFCPSNIYSSTGRVHSNMPGS---PTEADPSSSLVNRDG 364
Query: 370 FRIYRSPREGPVPEALRQRSLPHLRVLPSDGVALLEIPDFYEVG--NFIDRHRDMRLDIE 427
Y V AL + + H L + +A +E + + G F D+HRDMRLDI+
Sbjct: 365 LSHYNMNGIAEVLLALER--IEHDEELTYEQLASIET-NLFSSGMFRFYDQHRDMRLDID 421
Query: 428 DMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSA--TNYINLEEPASKDQEPGSCI 485
+MSYEELLALG+++G V+T LSEE ++R LK +Y T I+L KD + C
Sbjct: 422 NMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLY----KDDDI-KCS 476
Query: 486 ICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALATKS 533
ICQE+Y D +++GT+ C H YH C+++WL +KN CPICK+ A KS
Sbjct: 477 ICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEKS 524
Score = 37 (18.1 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 153 GFPGSFQNLNAPAXXXXXVAPLHPRHPDGVTPMDAAC 189
G+ G + L A A HP P P + C
Sbjct: 295 GYFGRSERLGATASSATSRQMPHPTTPTDPNPSLSFC 331
>TAIR|locus:2028225 [details] [associations]
symbol:AT1G45180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007915
HOGENOM:HOG000241085 ProtClustDB:CLSN2681891 IPI:IPI00535770
RefSeq:NP_175132.1 UniGene:At.38723 ProteinModelPortal:Q9MAJ1
SMR:Q9MAJ1 EnsemblPlants:AT1G45180.1 GeneID:841086
KEGG:ath:AT1G45180 TAIR:At1g45180 eggNOG:NOG247923
InParanoid:Q9MAJ1 OMA:HISRNAS PhylomeDB:Q9MAJ1
Genevestigator:Q9MAJ1 Uniprot:Q9MAJ1
Length = 645
Score = 321 (118.1 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 65/145 (44%), Positives = 98/145 (67%)
Query: 390 LPHLRV---LPSDGVALLEIPDFYEVGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNT 446
L H+R L + V LL + DR+RDMRLD+++M+YEELL+L ERIG+V T
Sbjct: 504 LEHMRRAGNLRLEDVMLLNQSIMLGAADIHDRYRDMRLDVDNMTYEELLSLEERIGDVCT 563
Query: 447 GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEY 506
GL+EE ++ +LK + Y S+T +S++ EP C +CQE+Y++ E+IG L+C H++
Sbjct: 564 GLNEETISNRLKQQKYKSSTR-------SSQEVEP--CCVCQEEYKEEEEIGRLECGHDF 614
Query: 507 HAECLKKWLFIKNVCPICKSEALAT 531
H++C+K+WL KN+CPICK+ L T
Sbjct: 615 HSQCIKEWLKQKNLCPICKTTGLNT 639
>TAIR|locus:2149378 [details] [associations]
symbol:AT5G24870 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
ProtClustDB:CLSN2690147 EMBL:AY136427 EMBL:BT014966 IPI:IPI00519150
RefSeq:NP_568462.2 RefSeq:NP_974832.1 UniGene:At.23213
ProteinModelPortal:Q8L775 SMR:Q8L775 EnsemblPlants:AT5G24870.1
EnsemblPlants:AT5G24870.2 GeneID:832556 KEGG:ath:AT5G24870
TAIR:At5g24870 eggNOG:NOG316091 HOGENOM:HOG000071011
InParanoid:Q8L775 OMA:EEKMGTV PhylomeDB:Q8L775 ArrayExpress:Q8L775
Genevestigator:Q8L775 Uniprot:Q8L775
Length = 520
Score = 312 (114.9 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 63/134 (47%), Positives = 91/134 (67%)
Query: 396 LPSDGVALLEIPDFYE-VGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVA 454
L + +A+LE F + +F D+HRDMRLDI++MSYEELLAL E++G V+T LSEE +
Sbjct: 382 LTYEQLAVLETNLFLNGMSSFHDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEALL 441
Query: 455 RQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKW 514
+ LK+ +Y N + + +KD + C ICQE+Y D +++GTL C H+YH C ++W
Sbjct: 442 KSLKSSIY--RPNDESDDICLNKDDDV-KCSICQEEYVDGDEVGTLPCQHKYHVSCAQQW 498
Query: 515 LFIKNVCPICKSEA 528
L +KN CPICK+ A
Sbjct: 499 LRMKNWCPICKTSA 512
>TAIR|locus:2027804 [details] [associations]
symbol:AT1G73760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AC012679 ProtClustDB:CLSN2679891 IPI:IPI00547580 PIR:H96764
RefSeq:NP_177517.1 UniGene:At.27716 ProteinModelPortal:Q9C9T6
SMR:Q9C9T6 EnsemblPlants:AT1G73760.1 GeneID:843711
KEGG:ath:AT1G73760 TAIR:At1g73760 eggNOG:NOG237784
HOGENOM:HOG000077709 InParanoid:Q9C9T6 OMA:SADWDAS PhylomeDB:Q9C9T6
Genevestigator:Q9C9T6 Uniprot:Q9C9T6
Length = 367
Score = 262 (97.3 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 55/143 (38%), Positives = 90/143 (62%)
Query: 392 HLRVLPSDGVA-LLEIPDFYEVGNFI---DRHRDMRLDIEDMSYEELLALGERIGNVNTG 447
HLR+ DG+A ++ + + + +G + D+ RDMRL++++M+YE+LL LGERIG+VNTG
Sbjct: 233 HLRLPYPDGLAEMMMMQNGFVMGGVLSSFDQFRDMRLNVDNMTYEQLLELGERIGHVNTG 292
Query: 448 LSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS--CIICQEDYRDNEKIGTLDCDHE 505
L+E +Q+K+ + +P +D CIICQ++Y +++G L C H
Sbjct: 293 LTE----KQIKS--------CLRKVKPCRQDTTVADRKCIICQDEYEAKDEVGELRCGHR 340
Query: 506 YHAECLKKWLFIKNVCPICKSEA 528
+H +C+ +WL KN CP+CK+ A
Sbjct: 341 FHIDCVNQWLVRKNSCPVCKTMA 363
>TAIR|locus:2030933 [details] [associations]
symbol:AT1G17970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AF428290
EMBL:AY116963 IPI:IPI00539075 RefSeq:NP_173239.1 UniGene:At.26262
ProteinModelPortal:Q944L9 SMR:Q944L9 IntAct:Q944L9
EnsemblPlants:AT1G17970.1 GeneID:838377 KEGG:ath:AT1G17970
TAIR:At1g17970 InParanoid:Q944L9 OMA:ESEIHRC PhylomeDB:Q944L9
ProtClustDB:CLSN2679891 Genevestigator:Q944L9 Uniprot:Q944L9
Length = 368
Score = 250 (93.1 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 55/151 (36%), Positives = 85/151 (56%)
Query: 382 PEALRQRSLPHL-RVLPSDGVALLEIPDFYEVGNFID---RHRDMRLDIEDMSYEELLAL 437
P L R HL R P D + + + + +G D + ++RLD++ MSYE+LL L
Sbjct: 225 PTMLSSRCRGHLPRSYPDDLTEMRMLQNGFVMGRITDSRDNYHELRLDVDSMSYEQLLEL 284
Query: 438 GERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKI 497
G+RIG VNTGL E + R L ++ S ++ + D++ C ICQ++Y +++
Sbjct: 285 GDRIGYVNTGLKESEIHRCLG-KIKPSVSHTL-------VDRK---CSICQDEYEREDEV 333
Query: 498 GTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
G L+C H +H C+K+WL KN CP+CK A
Sbjct: 334 GELNCGHSFHVHCVKQWLSRKNACPVCKKAA 364
>TAIR|locus:504955576 [details] [associations]
symbol:BB "BIG BROTHER" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031624 "ubiquitin conjugating enzyme binding"
evidence=IPI] [GO:0046621 "negative regulation of organ growth"
evidence=IMP] [GO:0048437 "floral organ development" evidence=IMP]
[GO:0051865 "protein autoubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048437 GO:GO:0004842
GO:GO:0046621 GO:GO:0051865 HOGENOM:HOG000239779 EMBL:AL732522
EMBL:BT010197 EMBL:AK318710 EMBL:AK227673 IPI:IPI00538123
IPI:IPI00969304 RefSeq:NP_001030922.1 RefSeq:NP_680148.1
UniGene:At.44049 HSSP:P28990 ProteinModelPortal:Q8L649 SMR:Q8L649
EnsemblPlants:AT3G63530.1 EnsemblPlants:AT3G63530.2 GeneID:825528
KEGG:ath:AT3G63530 TAIR:At3g63530 eggNOG:NOG327333
InParanoid:Q8L649 OMA:SINKVCP PhylomeDB:Q8L649
ProtClustDB:CLSN2690625 Genevestigator:Q8L649 Uniprot:Q8L649
Length = 248
Score = 208 (78.3 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 42/110 (38%), Positives = 62/110 (56%)
Query: 424 LDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS 483
+D + M+YEEL+ LGE +G + GLS+E++ L T+ Y + + S+ +
Sbjct: 145 IDPDTMTYEELVELGEAVGTESRGLSQELI-ETLPTKKYKFGSIF-------SRKRAGER 196
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALATKS 533
C+ICQ Y+ E+ L C H YH+EC+ KWL I VCP+C SE S
Sbjct: 197 CVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246
>TAIR|locus:2155513 [details] [associations]
symbol:AT5G67120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AB020742 IPI:IPI00525708 RefSeq:NP_201513.1 UniGene:At.55725
ProteinModelPortal:Q9FHA1 SMR:Q9FHA1 EnsemblPlants:AT5G67120.1
GeneID:836847 KEGG:ath:AT5G67120 TAIR:At5g67120 eggNOG:NOG263912
HOGENOM:HOG000152468 InParanoid:Q9FHA1 OMA:WLQSSTN PhylomeDB:Q9FHA1
ProtClustDB:CLSN2916539 Genevestigator:Q9FHA1 Uniprot:Q9FHA1
Length = 272
Score = 203 (76.5 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 39/100 (39%), Positives = 57/100 (57%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQE 489
+YEELL++ + G+ TGLSEE++ L R Y E S D E C+ICQ+
Sbjct: 184 TYEELLSITDETGDERTGLSEEVIDENLIRRKY----------EKRS-DDETKRCVICQQ 232
Query: 490 DYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
+DNE++ L C H++H C+K WL + N CP+C E +
Sbjct: 233 KLKDNEEVSKLGCGHDFHFGCIKNWLMVTNKCPLCNREVV 272
>TAIR|locus:2092271 [details] [associations]
symbol:AT3G19910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0051865 EMBL:AB025631 EMBL:AY045590 EMBL:AY045984
EMBL:AY079353 EMBL:AY084453 IPI:IPI00540114 RefSeq:NP_566651.1
UniGene:At.19776 ProteinModelPortal:Q9LT17 SMR:Q9LT17 STRING:Q9LT17
PaxDb:Q9LT17 PRIDE:Q9LT17 EnsemblPlants:AT3G19910.1 GeneID:821529
KEGG:ath:AT3G19910 TAIR:At3g19910 eggNOG:NOG313539
HOGENOM:HOG000239779 InParanoid:Q9LT17 OMA:HANEDDQ PhylomeDB:Q9LT17
ProtClustDB:CLSN2688581 Genevestigator:Q9LT17 Uniprot:Q9LT17
Length = 340
Score = 215 (80.7 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 43/110 (39%), Positives = 63/110 (57%)
Query: 424 LDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS 483
+D +++SYEELLALG+ +G + GLS + +A L ++ Y N E S
Sbjct: 238 MDPDELSYEELLALGDIVGTESRGLSADTIA-SLPSKRYKEGDNQNGTNE---------S 287
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALATKS 533
C+IC+ DY D+E + L C H YH+EC+ WL I VCP+C +E + S
Sbjct: 288 CVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 337
>TAIR|locus:2075641 [details] [associations]
symbol:AT3G47180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000239779 EMBL:AL133292 EMBL:BT011767 EMBL:BT012388
IPI:IPI00534401 PIR:T45654 RefSeq:NP_190302.1 UniGene:At.35834
ProteinModelPortal:Q9SD55 SMR:Q9SD55 EnsemblPlants:AT3G47180.1
GeneID:823871 KEGG:ath:AT3G47180 TAIR:At3g47180 eggNOG:NOG276691
InParanoid:Q9SD55 OMA:NEFLEDQ PhylomeDB:Q9SD55
ProtClustDB:CLSN2714450 Genevestigator:Q9SD55 Uniprot:Q9SD55
Length = 210
Score = 196 (74.1 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 42/118 (35%), Positives = 67/118 (56%)
Query: 411 EVGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYIN 470
E +F++ + +D + +SYEEL+ALG+ IG N GL+ ++ L+A+ Y+
Sbjct: 101 EEDDFLEEEDE--IDPDQLSYEELIALGDFIGVENRGLTP------IEISTCLNASTYVF 152
Query: 471 LEEPASKDQEPGSCIICQEDYRDNEKIGTL-DCDHEYHAECLKKWLFIKNVCPICKSE 527
D+ C++CQ ++ + E + L CDH YH+EC+ KWL K +CPIC SE
Sbjct: 153 SHNKNEIDR----CVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPICCSE 206
>TAIR|locus:2145086 [details] [associations]
symbol:AT5G52140 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG243435
EMBL:DQ447065 IPI:IPI00526226 RefSeq:NP_200027.2 UniGene:At.55498
ProteinModelPortal:Q1PDK3 SMR:Q1PDK3 EnsemblPlants:AT5G52140.1
GeneID:835290 KEGG:ath:AT5G52140 TAIR:At5g52140
HOGENOM:HOG000124786 InParanoid:Q1PDK3 OMA:DDIQETH PhylomeDB:Q1PDK3
ProtClustDB:CLSN2920553 ArrayExpress:Q1PDK3 Genevestigator:Q1PDK3
Uniprot:Q1PDK3
Length = 280
Score = 202 (76.2 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 43/108 (39%), Positives = 62/108 (57%)
Query: 421 DMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSAT-NYINLEEPASKDQ 479
D D E+M+YEEL LG+ +G+V GLS+E ++R L+T Y + T ++ L
Sbjct: 171 DENNDPENMTYEELTELGDSVGDVGKGLSQERISR-LRTHKYGTKTKSWYCLHMKKKFVA 229
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
+ C IC +Y +KI TL C H YH +C+ +WL VC ICK+E
Sbjct: 230 DDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAE 277
>ZFIN|ZDB-GENE-060929-604 [details] [associations]
symbol:rnf44 "ring finger protein 44" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-060929-604 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 EMBL:BC124246 IPI:IPI00801239
RefSeq:NP_001070092.1 UniGene:Dr.72465 ProteinModelPortal:Q08CG8
SMR:Q08CG8 Ensembl:ENSDART00000099235 GeneID:767686 KEGG:dre:767686
CTD:22838 InParanoid:Q08CG8 OMA:CSAQQLP OrthoDB:EOG498V0T
NextBio:20918075 ArrayExpress:Q08CG8 Bgee:Q08CG8 Uniprot:Q08CG8
Length = 448
Score = 170 (64.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 43/129 (33%), Positives = 68/129 (52%)
Query: 401 VALLEIPDFYEVGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKT 459
+++L +P VG I D+ D+E +YE LL L ER+G GL++ + QL +
Sbjct: 325 LSMLPVPPT-AVGPAISLDLDVD-DVEMENYEALLNLAERLGEAKPRGLTKADI-EQLPS 381
Query: 460 RVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKN 519
+ NLE S E C++C D+ + + L C+HE+HA+C+ KWL
Sbjct: 382 YRF-------NLENHQS---EQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNR 431
Query: 520 VCPICKSEA 528
CPIC+++A
Sbjct: 432 TCPICRADA 440
Score = 48 (22.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 314 PHPPPPFQGIRNHNTNVHPQ 333
PHPPPP N + PQ
Sbjct: 209 PHPPPPHLPPINQFVPIQPQ 228
Score = 38 (18.4 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 309 QHLSFPHPPPPF 320
Q L P PPPP+
Sbjct: 305 QPLPPPPPPPPY 316
>UNIPROTKB|F6QF09 [details] [associations]
symbol:RNF122 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PIAGPPE GeneTree:ENSGT00700000104226 EMBL:DAAA02060519
IPI:IPI00703726 Ensembl:ENSBTAT00000021827 Uniprot:F6QF09
Length = 146
Score = 150 (57.9 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 471 LEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
L+ A K Q G+C +C ED+R +++G L C H +H +CL KWL ++ VCP+C
Sbjct: 71 LKGDAKKLQLYGTCAVCLEDFRGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 124
>DICTYBASE|DDB_G0282479 [details] [associations]
symbol:DDB_G0282479 "E3 ubiquitin-protein ligase
DMA2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0282479 EMBL:AAFI02000047
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG302028 RefSeq:XP_640074.1 ProteinModelPortal:Q54SG5
EnsemblProtists:DDB0204786 GeneID:8623603 KEGG:ddi:DDB_G0282479
InParanoid:Q54SG5 Uniprot:Q54SG5
Length = 320
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/105 (36%), Positives = 59/105 (56%)
Query: 425 DIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPAS---KDQEP 481
D Y+ LLAL I N + G +E ++ L T++I+ ++ K +
Sbjct: 220 DFNSNDYDMLLALDNDIQN-HGGAKKE--------QIDLLPTHFIDTDKDLEIFLKGGDS 270
Query: 482 GSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKS 526
+C IC +D+ N+ I TL C H YH++C++KWL IK+VCPICK+
Sbjct: 271 KTCSICLDDFAVNDAIKTLPCIHHYHSDCVEKWLKIKSVCPICKT 315
>RGD|1307212 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 67/245 (27%), Positives = 97/245 (39%)
Query: 300 TFLQPPVNIQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVP 359
T + P L HP P Q + N Q SF +Y T S VP
Sbjct: 114 THMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSF----TYSTSATGPTLSPSVP 169
Query: 360 RHMGPVPPTGFRI-YRSPREGPVPEALR------QRSLPHLRVLPSDGVALLEIPDFYE- 411
H P P + + P +P L Q+ LP P +P F
Sbjct: 170 LHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSM 229
Query: 412 -------VGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYL 463
VG I D+ D+E +YE LL L ER+G+ GL++ + QL + +
Sbjct: 230 LPMSPTTVGPTISLDLDVD-DVEMENYEALLNLAERLGDAKPRGLTKADI-EQLPSYRF- 286
Query: 464 SATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPI 523
P S E C++C D+ + + L C+HE+HA+C+ KWL CPI
Sbjct: 287 ---------NPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPI 337
Query: 524 CKSEA 528
C+++A
Sbjct: 338 CRADA 342
>UNIPROTKB|Q4V7B8 [details] [associations]
symbol:Rnf44 "RING finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 67/245 (27%), Positives = 97/245 (39%)
Query: 300 TFLQPPVNIQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVP 359
T + P L HP P Q + N Q SF +Y T S VP
Sbjct: 114 THMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSF----TYSTSATGPTLSPSVP 169
Query: 360 RHMGPVPPTGFRI-YRSPREGPVPEALR------QRSLPHLRVLPSDGVALLEIPDFYE- 411
H P P + + P +P L Q+ LP P +P F
Sbjct: 170 LHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSM 229
Query: 412 -------VGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYL 463
VG I D+ D+E +YE LL L ER+G+ GL++ + QL + +
Sbjct: 230 LPMSPTTVGPTISLDLDVD-DVEMENYEALLNLAERLGDAKPRGLTKADI-EQLPSYRF- 286
Query: 464 SATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPI 523
P S E C++C D+ + + L C+HE+HA+C+ KWL CPI
Sbjct: 287 ---------NPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPI 337
Query: 524 CKSEA 528
C+++A
Sbjct: 338 CRADA 342
>UNIPROTKB|F1RX76 [details] [associations]
symbol:RNF122 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PIAGPPE GeneTree:ENSGT00700000104226 EMBL:FP102412
Ensembl:ENSSSCT00000017242 Uniprot:F1RX76
Length = 154
Score = 147 (56.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 471 LEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
L+ A K Q G+C +C ED++ +++G L C H +H +CL KWL ++ VCP+C
Sbjct: 79 LKGDAKKLQLYGTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 132
>MGI|MGI:2145310 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:2145310
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 ChiTaRS:RNF44 EMBL:AK129290
EMBL:AK147349 EMBL:AK160090 EMBL:AK160115 EMBL:AK171943
EMBL:BC017630 EMBL:BC035548 IPI:IPI00453833 IPI:IPI00828733
IPI:IPI00828814 RefSeq:NP_001139497.1 RefSeq:NP_001139498.1
RefSeq:NP_001139499.1 RefSeq:NP_598825.2 UniGene:Mm.25366
ProteinModelPortal:Q3UHJ8 SMR:Q3UHJ8 PhosphoSite:Q3UHJ8
PRIDE:Q3UHJ8 Ensembl:ENSMUST00000037422 Ensembl:ENSMUST00000128257
Ensembl:ENSMUST00000134862 Ensembl:ENSMUST00000150806
Ensembl:ENSMUST00000177950 GeneID:105239 KEGG:mmu:105239
UCSC:uc007qot.2 UCSC:uc007qou.2 UCSC:uc007qow.2 InParanoid:Q3UHJ8
NextBio:357544 Bgee:Q3UHJ8 CleanEx:MM_RNF44 Genevestigator:Q3UHJ8
Uniprot:Q3UHJ8
Length = 407
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 67/245 (27%), Positives = 97/245 (39%)
Query: 300 TFLQPPVNIQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVP 359
T + P L HP P Q + N Q SF +Y T S VP
Sbjct: 171 THMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSF----TYSTSATGPALSPSVP 226
Query: 360 RHMGPVPPTGFRI-YRSPREGPVPEALR------QRSLPHLRVLPSDGVALLEIPDFYE- 411
H P P + + P +P L Q+ LP P +P F
Sbjct: 227 LHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSM 286
Query: 412 -------VGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYL 463
VG I D+ D+E +YE LL L ER+G+ GL++ + QL + +
Sbjct: 287 LPMSPTTVGPTISLDLDVD-DVEMENYEALLNLAERLGDAKPRGLTKADI-EQLPSYRF- 343
Query: 464 SATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPI 523
P S E C++C D+ + + L C+HE+HA+C+ KWL CPI
Sbjct: 344 ---------NPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPI 394
Query: 524 CKSEA 528
C+++A
Sbjct: 395 CRADA 399
>UNIPROTKB|F1NND0 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FLLHPPH EMBL:AADN02065332
IPI:IPI00598802 Ensembl:ENSGALT00000024714 Uniprot:F1NND0
Length = 459
Score = 167 (63.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 59/235 (25%), Positives = 90/235 (38%)
Query: 302 LQPPVNIQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRH 361
L PP PFQ I N + + F P S + H
Sbjct: 233 LPPPGQFVPFQAQQSRSPFQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTH 292
Query: 362 MGPVPPTGFRIYRSPREGPVPEAL----RQRSLPHLRVLPSDGVALLEIPDFYEVGNFID 417
F + P +P L R RS + P L + + V +
Sbjct: 293 DPLHQEVSFGVPYPPF---MPRRLTGRSRYRSQQPIPPHPYHPSLLPYVLSMFPVPPAVG 349
Query: 418 RHRDMRLDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEE 473
R + LD+ED +YE LL L ER+G GL++ + QL + +
Sbjct: 350 RAFSIELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------N 398
Query: 474 PASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
P + E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 399 PNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 453
Score = 43 (20.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 214 SSDPFLLHPPHLSPHHPPHLPPPGQ 238
>UNIPROTKB|F1S3A0 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:FP101981
Ensembl:ENSSSCT00000015355 Uniprot:F1S3A0
Length = 437
Score = 159 (61.0 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 425 DIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS 483
D+E +YE LL L ER+G+ GL++ + QL + + P S E
Sbjct: 336 DVEMENYEALLNLAERLGDAKPRGLTKADI-EQLPSYRF----------HPDSHQSEQTL 384
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
C++C D+ + + L C+HE+H +C+ KWL CPIC+++A
Sbjct: 385 CVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADA 429
Score = 49 (22.3 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 31/118 (26%), Positives = 42/118 (35%)
Query: 8 CTSQMIDLEMDQQNRGYLLPEPCVVLGGVTSFPQPMQTIVRASGNTSSLDA-HQHYDSAM 66
CT Q L + Q +L+ +L P P T + G SL H
Sbjct: 165 CTMQQ--LPVPYQAYPHLISSDHYILHPPPPAPHPQPTHMAPLGQFVSLQTQHPRMPLQR 222
Query: 67 FYGMPQYHGVHHHHAASVDLGASTASNLYVPYMPTLSSGMPVNHGSTDQLPSSRNFGV 124
G H LG+ T S P PTLS +P+++ D L +FGV
Sbjct: 223 LDNDVDLRGDQH------PLGSFTYSTS-APG-PTLSPSVPLHYLPHDPLHQELSFGV 272
Score = 45 (20.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 21/81 (25%), Positives = 31/81 (38%)
Query: 304 PPVNIQHLSFPHPPP-PFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHM 362
PP + L PPP P + P + P+S ++ D E V H
Sbjct: 51 PPAQDERLPSQQPPPRPAHLPVEERRALAPAGGSPRMLHPTSQQSP-FMVDLHEQV--HQ 107
Query: 363 GPVPPTGFRIYRSPREG-PVP 382
GPVP + + +G P+P
Sbjct: 108 GPVP-LSYTVTTVTTQGFPLP 127
Score = 40 (19.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 18/79 (22%), Positives = 30/79 (37%)
Query: 315 HPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHMGPVPPTGFRIYR 374
HPPPP H H + + + M + + +++ R G P G Y
Sbjct: 189 HPPPPAP----HPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLR--GDQHPLGSFTYS 242
Query: 375 SPREGP-VPEALRQRSLPH 392
+ GP + ++ LPH
Sbjct: 243 TSAPGPTLSPSVPLHYLPH 261
Score = 37 (18.1 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 19/76 (25%), Positives = 28/76 (36%)
Query: 359 PRHMGPVPPTGFRIYRSPREGPVPEALRQRSLP--HLRVL-PSDGVALLEIPDFYEVGNF 415
P GP+ + R P + P P R LP R L P+ G + P +
Sbjct: 42 PSREGPLASPPAQDERLPSQQPPP---RPAHLPVEERRALAPAGGSPRMLHPTSQQSPFM 98
Query: 416 IDRHRDMRLDIEDMSY 431
+D H + +SY
Sbjct: 99 VDLHEQVHQGPVPLSY 114
>TAIR|locus:2203063 [details] [associations]
symbol:AT1G36950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00516752
RefSeq:NP_174888.1 UniGene:At.51981 ProteinModelPortal:F4I3A0
SMR:F4I3A0 EnsemblPlants:AT1G36950.1 GeneID:840604
KEGG:ath:AT1G36950 Uniprot:F4I3A0
Length = 226
Score = 154 (59.3 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 404 LEIPDFYEVGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYL 463
++ + E+ ID ++++R+D + M+YE+LL L +G N+ + + R +
Sbjct: 11 MDTDPYQELRMDIDPYQELRMDTDHMTYEQLLQLCNSMGYENSSVKASNIDRCFRN---- 66
Query: 464 SATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPI 523
T + A K C ICQ+ ++ +G L+C H +H +K W+ K CP+
Sbjct: 67 --TKPSEFQSLADK-----ICCICQDRFQRRAGVGKLNCGHNFHINSVKPWILTKKQCPV 119
Query: 524 CKSEA 528
C+ A
Sbjct: 120 CQKTA 124
>TAIR|locus:2126906 [details] [associations]
symbol:AT4G00070 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
SMART:SM00184 EMBL:CP002687 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00541050 RefSeq:NP_191918.4
UniGene:At.50310 ProteinModelPortal:F4JH02 SMR:F4JH02 DNASU:828211
EnsemblPlants:AT4G00070.1 GeneID:828211 KEGG:ath:AT4G00070
Uniprot:F4JH02
Length = 179
Score = 142 (55.0 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 30/102 (29%), Positives = 52/102 (50%)
Query: 417 DRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPAS 476
D ++++R+D + M+YE+LL L +G N+G+ + R L+ T + A
Sbjct: 88 DPYQELRMDTDHMTYEQLLQLCNNMGYENSGVKASNIDRCLRN------TKPSEFQSLAD 141
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIK 518
K C ICQ+ ++ +G L+C H +H C+K W+ K
Sbjct: 142 K-----ICCICQDGFQKRAGVGKLNCGHNFHVNCVKPWILTK 178
>FB|FBgn0037705 [details] [associations]
symbol:mura "murashka" species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048149 "behavioral response to ethanol" evidence=IMP]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IGI] [GO:0007616 "long-term memory" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:AE014297 GO:GO:0008355 GO:GO:0046872 GO:GO:0008270
GO:GO:0007616 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00670000097625 UniGene:Dm.11144 GeneID:41145
KEGG:dme:Dmel_CG9381 CTD:41145 FlyBase:FBgn0037705 GenomeRNAi:41145
NextBio:822398 EMBL:BT125858 RefSeq:NP_731367.2 SMR:Q9VHC2
STRING:Q9VHC2 EnsemblMetazoa:FBtr0082118 UCSC:CG9381-RC
InParanoid:Q9VHC2 OMA:ARLAPCH Uniprot:Q9VHC2
Length = 1173
Score = 148 (57.2 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 427 EDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCI 485
E +YE LL+L ER+G GL+ + QL + + P + + SC+
Sbjct: 1030 ETENYEALLSLAERLGEAKPRGLTRNEID-QLPSYKF----------NPEVHNGDQSSCV 1078
Query: 486 ICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
+C D+ + + L C HE+HA+C+ KWL CPIC+ A
Sbjct: 1079 VCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNA 1121
Score = 66 (28.3 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 71/291 (24%), Positives = 104/291 (35%)
Query: 105 GMPVNHGSTDQLPSSRNF--GVIGASAEEYGRNSHFMDNVRGSYKRKNTEGFPGSFQNLN 162
G + +G+T+ P N+ GV A + +Y N + +N G R+ NLN
Sbjct: 466 GNGIVNGNTNGPPDYMNYRRGVCPAQSRDYSGNGNGNNNGHGHNGRRYMS------DNLN 519
Query: 163 APAXXXXXV--APLHPRHPDGVTPMDAACFSLPQYRGNGTPSIR---EVESQRSVRNRLV 217
P+ + + H R+ + + F + NG P R E S +RN
Sbjct: 520 NPSSSMNGLINSGHHQRNYNDRNLNNH--FGNSEQ--NGGPDHRDRAEGSSYNFMRNGGG 575
Query: 218 ATGGMDPVLAHSHNHFIQGNFIGQPFQPAG---WLEQPSDGG--GSSWT--QAPA----- 265
+ GG + H GN G G E PS G GSS + P
Sbjct: 576 SGGGGYGRNGSHYQHMAYGNNNGASTSTGGPGLMGELPSGSGLSGSSLSLNNGPGGLNSD 635
Query: 266 IPYMHGSNVSGAPMDSGNMVVQRYPETAGNRNSSTFLQPPVNIQHLSFPHPPPPFQGIRN 325
P +SG P +G R P + S +P + S + G +
Sbjct: 636 SPSRKRRRISGRP-PNGPQPQHRCPMAHMQQGSPPLRRPRLRDVATSTQQQQQQY-GHQV 693
Query: 326 HNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHMGPVPPTGFRIYRSP 376
H HPQ + PS+Y M+ Q VP+ P PP + RSP
Sbjct: 694 H----HPQQQQQ--QPPSNYHPMHHHQPQPHYVPQQQVP-PP---HVQRSP 734
Score = 63 (27.2 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 29/130 (22%), Positives = 45/130 (34%)
Query: 50 SGNTSSLDAHQHYDSAMFYGMPQYHGVHHHHAASVDLGASTASNLYVPYMP-TLSSGMPV 108
S N +H H + ++ G H H + SN Y Y P + S P
Sbjct: 155 SNNNGHTQSHIHTNHSLHQGHHHPHHTQMHTPHYPHSSSPQQSNSYRQYPPHSYSPNSPH 214
Query: 109 NHGSTDQLPSSRNFGVIG--ASAEEYGRNSHFMDNVRGSYKRKNTEGFPGSFQNLNAPAX 166
++G T+ S+ + +NS+F + GS S LN PA
Sbjct: 215 SNGHTNSNASNNPISQRSNPQAHPNQNQNSNFYEMCTGSGGSHTYGSMSVSLVRLN-PAR 273
Query: 167 XXXXVAPLHP 176
+ P+ P
Sbjct: 274 LCLTLGPVTP 283
Score = 56 (24.8 bits), Expect = 2.7e-07, Sum P(4) = 2.7e-07
Identities = 25/101 (24%), Positives = 35/101 (34%)
Query: 201 PSIREVESQRSVRNRLVATGGMDPVLAHSHNHFIQGNFIGQPFQPAGWLEQPSDGGGSSW 260
P R S RS R GG H+H H Q Q Q G ++G + W
Sbjct: 19 PFTRNSSSVRSQRGGGGGLGGRMVYSPHTHPHVQQQQQQQQQQQQQGQQRSSNNGNNNLW 78
Query: 261 T-QAPAIPY-MHGSNVSGAPMDSGNMVVQRYPETAGNRNSS 299
+P ++G N + GN + N NS+
Sbjct: 79 LGNSPWCNVNLNGGNSGNNNNNGGNNNNNNGGNISSNNNSN 119
Score = 49 (22.3 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 30 CVVLGGVT-------SFPQPMQTIVRASGNTSSLDAHQHYDSAMFYGMPQYHGVHHHHA 81
C+ LG VT SF + +S NTSS D +QH Q H + HH+
Sbjct: 275 CLTLGPVTPPAQRVVSFGHRSHSHSNSSSNTSSSDQNQHNPPPR----SQNHHPNPHHS 329
Score = 46 (21.3 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 17/90 (18%), Positives = 29/90 (32%)
Query: 313 FPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHMGPVPPTGFRI 372
FP PPP P + A ++ +D + ++GP+ G
Sbjct: 834 FPAAPPPGLAAPPLQQQHQPLIQAQQMISQATLTAQQQQRDVVAIATANLGPIEAPG--A 891
Query: 373 YRSPREGPVPEALRQRSLPHLRVLPSDGVA 402
+ P P + P + + P G A
Sbjct: 892 HGHPHAHPHAHPHAHQLPPGIHITPLSGAA 921
Score = 45 (20.9 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 24/92 (26%), Positives = 37/92 (40%)
Query: 303 QPPVNIQHLSFPHPPP-PFQGIRNHNTNVHPQVAAASFRVP--SSYRTMNISQDGSEMVP 359
QPP + Q + +P PP P + + N N P P +S+ T I + + P
Sbjct: 765 QPPSHQQAVGYPQAPPQPASLMVDLNLNQVPVNLQLRPSEPFWASFCTYPIPAQ-ARLAP 823
Query: 360 RHMGPVPPTGFRIYRSPREGPVPEALRQRSLP 391
H+ V F +P G L+Q+ P
Sbjct: 824 CHLHGVYTQPFPA--APPPGLAAPPLQQQHQP 853
Score = 42 (19.8 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 17/74 (22%), Positives = 33/74 (44%)
Query: 284 MVVQRYPETAGNRNSSTFLQPPVNIQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRVPS 343
M YP ++ + S+++ Q P + + PH G N N + +P ++ S P
Sbjct: 183 MHTPHYPHSSSPQQSNSYRQYPPHSYSPNSPHS----NGHTNSNASNNP-ISQRSN--PQ 235
Query: 344 SYRTMNISQDGSEM 357
++ N + + EM
Sbjct: 236 AHPNQNQNSNFYEM 249
Score = 40 (19.1 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 59 HQ-HYDSAMFYGMPQ-YHGVHHH 79
HQ H+ P YH +HHH
Sbjct: 691 HQVHHPQQQQQQPPSNYHPMHHH 713
Score = 37 (18.1 bits), Expect = 2.7e-07, Sum P(4) = 2.7e-07
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 109 NHGSTDQLPSSRN 121
NHG + + P +RN
Sbjct: 11 NHGGSSRRPFTRN 23
>UNIPROTKB|F1P2A5 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:AADN02040362 IPI:IPI00820139
Ensembl:ENSGALT00000006632 ArrayExpress:F1P2A5 Uniprot:F1P2A5
Length = 880
Score = 150 (57.9 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 45/155 (29%), Positives = 66/155 (42%)
Query: 379 GPV-PEALRQRSLPHLRVLPSDGVALLEIPDF--YEVGNFIDRHRD---MRLDIEDMSYE 432
GP+ P + P L L + L+ +PD Y +I D R ++E
Sbjct: 718 GPLHPHLAHYHAPPRLHHLQIGALPLM-VPDMAGYPHIRYISSGLDGTSFRGPFRG-NFE 775
Query: 433 ELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINL--EEPASKDQEPGSCIICQED 490
EL+ L ER+GNVN G ++ + R Y + EE +D E C IC
Sbjct: 776 ELIHLEERLGNVNRGATQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEE-KCTICLSI 834
Query: 491 YRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
+ E + L C H +H C+ +WL CPIC+
Sbjct: 835 LEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 869
Score = 69 (29.3 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 86/355 (24%), Positives = 128/355 (36%)
Query: 10 SQMIDLEMDQQNRGYLLPEPCVVLGGVTSFPQPMQTIVRASGNTSSL-------DAHQHY 62
++++DL +D+ EP VV TS Q + AS N+SS DA +
Sbjct: 273 AEVVDLTVDED-------EPTVV--PTTSARVEPQVVSSASSNSSSTSTSEQASDAASNV 323
Query: 63 DSAMFYGMPQY-HGVHHHHAASVDLGAST---ASNLYV----PYMPTLSSGMPVNHGSTD 114
++ P+ + + A G T ASN + P MP L S P H
Sbjct: 324 STSQPSAAPETTSSLPNSSTAGTSAGDDTRRTASNTTLETGPPAMPRLPSCCP-QHSPCG 382
Query: 115 QLPSSRNFGVIG----ASAEEYGRNSHFMDNVRGSYKRKNTEGFPGSFQNLNAPAXXXXX 170
SS+N +G + +++G HF + + SF + N P
Sbjct: 383 G--SSQNHHALGHPHTSCFQQHGH--HFQHHHHHHHNPHPAVPLSPSFSDSNCPVERPPP 438
Query: 171 V-APLHPRHPDGVTPMDAACFSLP-QYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAH 228
V AP G + D A +LP NG + S S T DP
Sbjct: 439 VPAPCGASSSSGTSYHDQA-LALPVDLSSNG------IRSHGS--GAFHGTSAFDPCCPG 489
Query: 229 SHNHF-IQGNFIGQ-PFQPA---GW----LEQPSDGGGSSWTQAPAIPYMHGSNVS-GAP 278
S + I G+ G P Q G+ + QP + + YMH S P
Sbjct: 490 SSSRTAIYGHQTGAGPSQSLTIDGYGSSMVAQPQPQPPPQASLSSCRHYMHSPYASLTRP 549
Query: 279 MDSGNMVVQRYPETAGNRNSSTFLQPPVNIQHLSFPHPPPPFQ-GIRNHNTNVHP 332
+ + P + GN QPP + ++ PHP PF I +H ++ HP
Sbjct: 550 L---HHQASACPHSHGNPPPQP--QPPPQVDYV-IPHPVHPFHPSISSHASS-HP 597
Score = 41 (19.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 32/123 (26%), Positives = 48/123 (39%)
Query: 264 PAIPYMHGSNVSGAPMDSGNMVVQRYPETAGNRNSSTFLQPPVNIQHLSFPHPPPPFQGI 323
PA+P +S + DS N V+R P +S+ + Q L+ P GI
Sbjct: 418 PAVP------LSPSFSDS-NCPVERPPPVPAPCGASSSSGTSYHDQALALPVDLSS-NGI 469
Query: 324 RNHNTNVHPQVAAASFRVP-SSYRTMNIS-QDGSEMVPRHMGPVPPTGFRIYRSPREGPV 381
R+H + +A P SS RT Q G+ P + G + P+ P
Sbjct: 470 RSHGSGAFHGTSAFDPCCPGSSSRTAIYGHQTGAG--PSQSLTIDGYGSSMVAQPQPQPP 527
Query: 382 PEA 384
P+A
Sbjct: 528 PQA 530
Score = 39 (18.8 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 304 PPVNIQHLSFPHPPPP 319
P ++ S P PPPP
Sbjct: 587 PSISSHASSHPVPPPP 602
>UNIPROTKB|F1N0G7 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:22838 OMA:CSAQQLP
EMBL:DAAA02020035 IPI:IPI00688854 RefSeq:NP_001179642.1
UniGene:Bt.6313 ProteinModelPortal:F1N0G7
Ensembl:ENSBTAT00000023598 GeneID:531968 KEGG:bta:531968
NextBio:20875566 Uniprot:F1N0G7
Length = 432
Score = 159 (61.0 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 425 DIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS 483
D+E +YE LL L ER+G+ GL++ + QL + + P S E
Sbjct: 331 DVEMENYEALLNLAERLGDAKPRGLTKADI-EQLPSYRF----------HPDSHQSEQTL 379
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
C++C D+ + + L C+HE+H +C+ KWL CPIC+++A
Sbjct: 380 CVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
Score = 47 (21.6 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 100 PTLSSGMPVNHGSTDQLPSSRNFGV 124
PTLS+ +P+++ D L +FGV
Sbjct: 243 PTLSASVPMHYLPHDTLHHELSFGV 267
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 19/79 (24%), Positives = 29/79 (36%)
Query: 315 HPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHMGPVPPTGFRIYR 374
HPPPP H H + + + M + + +++ R G P G Y
Sbjct: 184 HPPPPAP----HPQPAHMAPLGQFMSLQTQHPRMPLQRLDNDVDLR--GDQHPLGSFTYS 237
Query: 375 SPREGPVPEA-LRQRSLPH 392
+ GP A + LPH
Sbjct: 238 TSAPGPTLSASVPMHYLPH 256
>ZFIN|ZDB-GENE-030616-560 [details] [associations]
symbol:si:dkey-51a16.9 "si:dkey-51a16.9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-030616-560 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
EMBL:BX530079 IPI:IPI00882963 Ensembl:ENSDART00000057687
ArrayExpress:F1Q9J1 Bgee:F1Q9J1 Uniprot:F1Q9J1
Length = 155
Score = 141 (54.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 467 NYINLEEPASKDQEPG-SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
N + L+ P K G +C +C E++R +++G C H +H +CL KWL I++VCP+C
Sbjct: 73 NEVVLKGPGKKLSLLGQTCAVCLEEFRSRDELGVCPCSHAFHKKCLVKWLEIRSVCPMC 131
>UNIPROTKB|Q9H9V4 [details] [associations]
symbol:RNF122 "RING finger protein 122" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
GO:GO:0005794 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:AK022588 EMBL:BC093884
EMBL:BC101573 IPI:IPI00015624 RefSeq:NP_079063.2 UniGene:Hs.151237
ProteinModelPortal:Q9H9V4 SMR:Q9H9V4 IntAct:Q9H9V4 STRING:Q9H9V4
PhosphoSite:Q9H9V4 DMDM:110816410 PRIDE:Q9H9V4
Ensembl:ENST00000256257 GeneID:79845 KEGG:hsa:79845 UCSC:uc003xjo.1
CTD:79845 GeneCards:GC08M033405 HGNC:HGNC:21147 HPA:HPA003888
neXtProt:NX_Q9H9V4 PharmGKB:PA134892945 HOGENOM:HOG000004806
HOVERGEN:HBG058899 InParanoid:Q9H9V4 KO:K15699 OMA:PIAGPPE
OrthoDB:EOG480HXV PhylomeDB:Q9H9V4 ChiTaRS:RNF122 GenomeRNAi:79845
NextBio:69538 Bgee:Q9H9V4 CleanEx:HS_RNF122 Genevestigator:Q9H9V4
GermOnline:ENSG00000133874 Uniprot:Q9H9V4
Length = 155
Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 471 LEEPASKDQEPG-SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
L+ A K Q G +C +C ED++ +++G L C H +H +CL KWL ++ VCP+C ++ +
Sbjct: 79 LKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC-NKPI 137
Query: 530 ATKS 533
A+ S
Sbjct: 138 ASPS 141
>UNIPROTKB|B4DYE0 [details] [associations]
symbol:RNF44 "cDNA FLJ61466, highly similar to Homo sapiens
ring finger protein 44 (RNF44), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC091934
HOVERGEN:HBG059283 UniGene:Hs.434888 HGNC:HGNC:19180 ChiTaRS:RNF44
EMBL:AC010316 EMBL:AK302385 IPI:IPI01010913 SMR:B4DYE0
Ensembl:ENST00000537487 Uniprot:B4DYE0
Length = 351
Score = 159 (61.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 425 DIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS 483
D+E +YE LL L ER+G+ GL++ + QL + + P S E
Sbjct: 250 DVEMENYEALLNLAERLGDAKPRGLTKADI-EQLPSYRF----------NPDSHQSEQTL 298
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
C++C D+ + + L C+HE+H +C+ KWL CPIC+++A
Sbjct: 299 CVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADA 343
Score = 41 (19.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 100 PTLSSGMPVNHGSTDQLPSSRNFGV 124
P LS +P+++ D L +FGV
Sbjct: 162 PALSPSVPLHYLPHDPLHQELSFGV 186
Score = 38 (18.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 315 HPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHMGPVPPTGFRIYR 374
HPPPP + T++ P S + + + M + + +++ R G P G Y
Sbjct: 103 HPPPPAPPPQP--THMAPLGQFVSLQ--TQHPRMPLQRLDNDVDLR--GDQPSLGSFTYS 156
Query: 375 SPREGPVPEALRQRSLPHLRVLPSD 399
+ GP AL S+P L LP D
Sbjct: 157 TSAPGP---ALSP-SVP-LHYLPHD 176
>UNIPROTKB|F1PLL1 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:152006 OMA:FLLHPPH
EMBL:AAEX03007963 RefSeq:XP_866889.1 Ensembl:ENSCAFT00000003636
GeneID:474766 KEGG:cfa:474766 Uniprot:F1PLL1
Length = 432
Score = 160 (61.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 424 LDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
LD+ED +YE LL L ER+G GL++ + QL + + P +
Sbjct: 327 LDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPNNHQS 375
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 424
Score = 43 (20.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 185 SSDPFLLHPPHLSPHHPPHLPPPGQ 209
Score = 37 (18.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 95 YVP--YMPTLSSGMPVNHGSTDQLPSSRNFGV 124
Y P + PTL P+ + D L +FGV
Sbjct: 243 YPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV 274
>UNIPROTKB|Q5XIX1 [details] [associations]
symbol:Rnf38 "Rnf38 protein" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:CH473962
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 OrthoDB:EOG4TB4B7 EMBL:BC083548 IPI:IPI00758440
UniGene:Rn.82699 SMR:Q5XIX1 STRING:Q5XIX1
Ensembl:ENSRNOT00000060203 InParanoid:Q5XIX1 Genevestigator:Q5XIX1
Uniprot:Q5XIX1
Length = 432
Score = 160 (61.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 424 LDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
LD+ED +YE LL L ER+G GL++ + QL + + P++
Sbjct: 327 LDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPSNHQS 375
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 424
Score = 43 (20.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 185 SSDPFLLHPPHLSPHHPPHLPPPGQ 209
Score = 37 (18.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 95 YVP--YMPTLSSGMPVNHGSTDQLPSSRNFGV 124
Y P + PTL P+ + D L +FGV
Sbjct: 243 YPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV 274
>ZFIN|ZDB-GENE-030131-8693 [details] [associations]
symbol:si:dkey-20n3.1 "si:dkey-20n3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-030131-8693 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CR936846 IPI:IPI00511731 RefSeq:XP_695200.4 UniGene:Dr.159457
UniGene:Dr.76333 Ensembl:ENSDART00000089233
Ensembl:ENSDART00000139241 GeneID:566820 KEGG:dre:566820
NextBio:20888388 Uniprot:E7FDX7
Length = 673
Score = 162 (62.1 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 35/111 (31%), Positives = 59/111 (53%)
Query: 422 MRLDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASK 477
+ LD++D +YE LL L ER+G GL++ + QL + + P++
Sbjct: 566 LELDVDDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPSNH 614
Query: 478 DQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 615 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 665
Score = 49 (22.3 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 73 YHGVHHHHAASVDLGA-STASNLYVP 97
+H +HHHH GA NL P
Sbjct: 130 HHHLHHHHQQQQQFGAHGHTENLRPP 155
Score = 40 (19.1 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 16/56 (28%), Positives = 21/56 (37%)
Query: 294 GNRNSST-FLQPP--VNIQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYR 346
GN S L P +N HL H G H N+ P + S P ++R
Sbjct: 113 GNSGSGGGALSPAGGINHHHLHHHHQQQQQFGAHGHTENLRPPGSMLS---PGAHR 165
Score = 38 (18.4 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 22/100 (22%), Positives = 38/100 (38%)
Query: 304 PPVNIQHLSFPHP-P------PPFQGIRNHNTNVHPQVAAAS----FRVPSSYRTMNISQ 352
P ++QHL P+ P PPF H ++ P + F+ S + +
Sbjct: 411 PACSVQHLPVPYAFPSLLSSDPPFL---LHPPHLSPHLPTPGQFLPFQAQQSRSPLQRIE 467
Query: 353 DGSEMVPRHMGPVPPTGFRIYRSPREGPVPEALRQRSLPH 392
+ E++ H+ GF S P+P + + L H
Sbjct: 468 NEVELLGDHLSV--GGGFNYPHSGHPSPLPPSTPLQFLSH 505
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 164 PAXXXXXVAPLHPRHPDGVTPMDAACFSLPQY 195
P V LH + P G P+ +P +
Sbjct: 335 PPQQGAMVMDLHEQLPQGTVPVSYTVSPVPPH 366
>UNIPROTKB|F1Q2J1 [details] [associations]
symbol:RNF122 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PIAGPPE GeneTree:ENSGT00700000104226 EMBL:AAEX03010410
Ensembl:ENSCAFT00000010190 Uniprot:F1Q2J1
Length = 155
Score = 138 (53.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 471 LEEPASKDQEPG-SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
L+ A K Q G +C +C ED++ +++G L C H +H +CL KWL ++ VCP+C
Sbjct: 79 LKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 133
>MGI|MGI:1916117 [details] [associations]
symbol:Rnf122 "ring finger protein 122" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1916117
Prosite:PS00518 GO:GO:0005783 GO:GO:0016021 GO:GO:0005794
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
CTD:79845 HOGENOM:HOG000004806 HOVERGEN:HBG058899 KO:K15699
OrthoDB:EOG480HXV EMBL:AK077856 EMBL:AK085376 EMBL:AK171823
EMBL:AK136206 EMBL:BC038399 EMBL:BC050268 IPI:IPI00342402
RefSeq:NP_780345.1 UniGene:Mm.29532 UniGene:Mm.400167
ProteinModelPortal:Q8BP31 SMR:Q8BP31 PhosphoSite:Q8BP31
PRIDE:Q8BP31 Ensembl:ENSMUST00000046941 GeneID:68867 KEGG:mmu:68867
UCSC:uc009ljd.1 eggNOG:NOG262552 GeneTree:ENSGT00700000104226
InParanoid:Q8BP31 NextBio:328081 Bgee:Q8BP31 CleanEx:MM_RNF122
Genevestigator:Q8BP31 GermOnline:ENSMUSG00000039328 Uniprot:Q8BP31
Length = 155
Score = 138 (53.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 471 LEEPASKDQEPG-SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
L+ A K Q G +C +C ED++ +++G L C H +H +CL KWL ++ VCP+C
Sbjct: 79 LKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 133
>RGD|1561238 [details] [associations]
symbol:RGD1561238 "similar to ring finger protein 122 homolog"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1561238 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
IPI:IPI00394572 Ensembl:ENSRNOT00000031701 Uniprot:F1LZF5
Length = 95
Score = 138 (53.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 471 LEEPASKDQEPG-SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
L+ A K Q G +C +C ED++ +++G L C H +H +CL KWL ++ VCP+C
Sbjct: 19 LKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC 73
>UNIPROTKB|Q3SZS9 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 GeneTree:ENSGT00670000097625 CTD:152006
HOGENOM:HOG000231638 HOVERGEN:HBG059283 OMA:FLLHPPH
OrthoDB:EOG4TB4B7 EMBL:DAAA02023138 EMBL:BC102724 IPI:IPI00686553
RefSeq:NP_001029753.1 UniGene:Bt.4320 SMR:Q3SZS9
Ensembl:ENSBTAT00000007260 GeneID:532877 KEGG:bta:532877
InParanoid:Q3SZS9 NextBio:20875836 Uniprot:Q3SZS9
Length = 432
Score = 160 (61.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 424 LDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
LD+ED +YE LL L ER+G GL++ + QL + + P +
Sbjct: 327 LDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPNNHQS 375
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 376 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 424
Score = 42 (19.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S F+ P ++ PH PPP Q
Sbjct: 185 SSDPFILHPPHLSPHHPPHLPPPSQ 209
>ZFIN|ZDB-GENE-060526-65 [details] [associations]
symbol:si:ch211-188g24.2 "si:ch211-188g24.2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-060526-65 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG260672
HOVERGEN:HBG080631 GeneTree:ENSGT00530000063291 OrthoDB:EOG4D7Z6X
EMBL:CR774200 IPI:IPI00802698 Ensembl:ENSDART00000144898
HOGENOM:HOG000203151 InParanoid:A2CEX5 OMA:NTVREMD NextBio:20888965
Uniprot:A2CEX5
Length = 378
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 449 SEEIVAR--QLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEY 506
S++I+ R LKTR Y + + ++ E SC +C E Y +N+ + L C HE+
Sbjct: 266 SQDILKRLSALKTRTYRQPK--VRCDPTQTQTMETESCAVCLEQYNNNQCLRVLPCLHEF 323
Query: 507 HAECLKKWLFIKNVCPICKSEALATK 532
H +C+ WL ++ CP+CK L K
Sbjct: 324 HRDCVDPWLLLQQTCPLCKRSVLGEK 349
>RGD|621856 [details] [associations]
symbol:Rnf38 "ring finger protein 38" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0007286
"spermatid development" evidence=NAS] [GO:0008584 "male gonad
development" evidence=IEP] [GO:0036126 "sperm flagellum"
evidence=IDA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:621856 GO:GO:0019861 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0008584 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 CTD:152006 HOVERGEN:HBG059283 IPI:IPI00758440
UniGene:Rn.82699 EMBL:AF480444 RefSeq:NP_604462.1
ProteinModelPortal:Q8R4E3 SMR:Q8R4E3 STRING:Q8R4E3
PhosphoSite:Q8R4E3 GeneID:171501 KEGG:rno:171501 UCSC:RGD:621856
InParanoid:Q8R4E3 NextBio:622473 Genevestigator:Q8R4E3
Uniprot:Q8R4E3
Length = 432
Score = 159 (61.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 36/108 (33%), Positives = 56/108 (51%)
Query: 424 LDIED---MSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQE 480
LD+ED +YE LL L ER+G E R L T+ + + P++ E
Sbjct: 327 LDVEDGEVENYEALLNLAERLG--------EAKPRGL-TKADIEQLPFYRFN-PSNHQSE 376
Query: 481 PGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 377 QTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 424
Score = 43 (20.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 185 SSDPFLLHPPHLSPHHPPHLPPPGQ 209
Score = 37 (18.1 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 95 YVP--YMPTLSSGMPVNHGSTDQLPSSRNFGV 124
Y P + PTL P+ + D L +FGV
Sbjct: 243 YPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV 274
>UNIPROTKB|F1LNX1 [details] [associations]
symbol:Rnf38 "Protein Rnf38" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00949289 Ensembl:ENSRNOT00000060201
ArrayExpress:F1LNX1 Uniprot:F1LNX1
Length = 464
Score = 160 (61.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 424 LDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
LD+ED +YE LL L ER+G GL++ + QL + + P++
Sbjct: 359 LDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPSNHQS 407
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 408 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 456
Score = 43 (20.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 217 SSDPFLLHPPHLSPHHPPHLPPPGQ 241
Score = 37 (18.1 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 95 YVP--YMPTLSSGMPVNHGSTDQLPSSRNFGV 124
Y P + PTL P+ + D L +FGV
Sbjct: 275 YPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV 306
>UNIPROTKB|B1AM81 [details] [associations]
symbol:RNF38 "RING finger protein 38" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161792 EMBL:AL354935 UniGene:Hs.333503 HGNC:HGNC:18052
HOGENOM:HOG000231638 HOVERGEN:HBG059283 ChiTaRS:RNF38
IPI:IPI00744793 SMR:B1AM81 Ensembl:ENST00000377870
Ensembl:ENST00000377877 UCSC:uc003zzl.3 Uniprot:B1AM81
Length = 439
Score = 160 (61.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 424 LDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
LD+ED +YE LL L ER+G GL++ + QL + + P +
Sbjct: 334 LDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPNNHQS 382
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 383 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 431
Score = 42 (19.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 192 SSDPFLIHPPHLSPHHPPHLPPPGQ 216
Score = 37 (18.1 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 95 YVP--YMPTLSSGMPVNHGSTDQLPSSRNFGV 124
Y P + PTL P+ + D L +FGV
Sbjct: 250 YPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV 281
>UNIPROTKB|F1P629 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:AAEX03002976
Ensembl:ENSCAFT00000026405 Uniprot:F1P629
Length = 441
Score = 159 (61.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 425 DIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS 483
D+E +YE LL L ER+G+ GL++ + QL + + P S E
Sbjct: 340 DVEMENYEALLNLAERLGDAKPRGLTKADI-EQLPSYRF----------NPDSHQSEQTL 388
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
C++C D+ + + L C+HE+H +C+ KWL CPIC+++A
Sbjct: 389 CVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADA 433
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 30/118 (25%), Positives = 41/118 (34%)
Query: 8 CTSQMIDLEMDQQNRGYLLPEPCVVLGGVTSFPQPMQTIVRASGNTSSLDA-HQHYDSAM 66
CT Q L + Q +L+ +L P P + G SL A H
Sbjct: 169 CTMQQ--LPVPYQAYPHLISSDHYILHPPPPAPHPQPAHMAPLGQFVSLQAQHPRMPLQR 226
Query: 67 FYGMPQYHGVHHHHAASVDLGASTASNLYVPYMPTLSSGMPVNHGSTDQLPSSRNFGV 124
G H LG+ T S P P LS +P+++ D L +FGV
Sbjct: 227 LDNDVDLRGDQH------PLGSFTYSTS-APG-PALSPSVPLHYLPHDPLHQELSFGV 276
Score = 41 (19.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 23/85 (27%), Positives = 33/85 (38%)
Query: 315 HPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHMGPVPPTGFRIYR 374
HPPPP H H + + + M + + +++ R G P G Y
Sbjct: 193 HPPPPAP----HPQPAHMAPLGQFVSLQAQHPRMPLQRLDNDVDLR--GDQHPLGSFTYS 246
Query: 375 SPREGPVPEALRQRSLPHLRVLPSD 399
+ GP AL S+P L LP D
Sbjct: 247 TSAPGP---ALSP-SVP-LHYLPHD 266
>UNIPROTKB|F1NJF6 [details] [associations]
symbol:RNF122 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PIAGPPE GeneTree:ENSGT00700000104226 EMBL:AADN02054910
IPI:IPI00580705 Ensembl:ENSGALT00000002505 Uniprot:F1NJF6
Length = 148
Score = 136 (52.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
+C +C ED++ E++G L C H +H +CL KWL ++ VCP+C
Sbjct: 85 TCAVCLEDFKVKEELGVLPCQHAFHRKCLVKWLEVRCVCPMC 126
>UNIPROTKB|F1LPR4 [details] [associations]
symbol:Rnf38 "Protein Rnf38" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 OMA:FLLHPPH IPI:IPI00776878
Ensembl:ENSRNOT00000018863 ArrayExpress:F1LPR4 Uniprot:F1LPR4
Length = 517
Score = 160 (61.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 424 LDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
LD+ED +YE LL L ER+G GL++ + QL + + P++
Sbjct: 412 LDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPSNHQS 460
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 461 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 509
Score = 43 (20.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 270 SSDPFLLHPPHLSPHHPPHLPPPGQ 294
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 95 YVP--YMPTLSSGMPVNHGSTDQLPSSRNFGV 124
Y P + PTL P+ + D L +FGV
Sbjct: 328 YPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV 359
>UNIPROTKB|F1ST85 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FLLHPPH EMBL:FP015977
EMBL:FP015987 Ensembl:ENSSSCT00000005882 Uniprot:F1ST85
Length = 518
Score = 160 (61.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 424 LDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
LD+ED +YE LL L ER+G GL++ + QL + + P +
Sbjct: 413 LDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPNNHQS 461
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 462 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 510
Score = 43 (20.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 271 SSDPFLLHPPHLSPHHPPHLPPPGQ 295
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 95 YVP--YMPTLSSGMPVNHGSTDQLPSSRNFGV 124
Y P + PTL P+ + D L +FGV
Sbjct: 329 YPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV 360
>UNIPROTKB|Q7L0R7 [details] [associations]
symbol:RNF44 "RING finger protein 44" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 OMA:CSAQQLP OrthoDB:EOG498V0T
EMBL:AB029023 EMBL:BC039833 EMBL:BC063297 EMBL:AL834489
IPI:IPI00470579 RefSeq:NP_055716.1 UniGene:Hs.434888
ProteinModelPortal:Q7L0R7 SMR:Q7L0R7 IntAct:Q7L0R7
PhosphoSite:Q7L0R7 DMDM:74758994 PRIDE:Q7L0R7
Ensembl:ENST00000274811 GeneID:22838 KEGG:hsa:22838 UCSC:uc003mek.1
GeneCards:GC05M175886 HGNC:HGNC:19180 HPA:HPA038981
neXtProt:NX_Q7L0R7 PharmGKB:PA38819 InParanoid:Q7L0R7
PhylomeDB:Q7L0R7 ChiTaRS:RNF44 GenomeRNAi:22838 NextBio:43277
ArrayExpress:Q7L0R7 Bgee:Q7L0R7 CleanEx:HS_RNF44
Genevestigator:Q7L0R7 Uniprot:Q7L0R7
Length = 432
Score = 159 (61.0 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 425 DIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS 483
D+E +YE LL L ER+G+ GL++ + QL + + P S E
Sbjct: 331 DVEMENYEALLNLAERLGDAKPRGLTKADI-EQLPSYRF----------NPDSHQSEQTL 379
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
C++C D+ + + L C+HE+H +C+ KWL CPIC+++A
Sbjct: 380 CVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424
Score = 41 (19.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 100 PTLSSGMPVNHGSTDQLPSSRNFGV 124
P LS +P+++ D L +FGV
Sbjct: 243 PALSPSVPLHYLPHDPLHQELSFGV 267
Score = 38 (18.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 315 HPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHMGPVPPTGFRIYR 374
HPPPP + T++ P S + + + M + + +++ R G P G Y
Sbjct: 184 HPPPPAPPPQP--THMAPLGQFVSLQ--TQHPRMPLQRLDNDVDLR--GDQPSLGSFTYS 237
Query: 375 SPREGPVPEALRQRSLPHLRVLPSD 399
+ GP AL S+P L LP D
Sbjct: 238 TSAPGP---ALSP-SVP-LHYLPHD 257
>TAIR|locus:2093335 [details] [associations]
symbol:AT3G30460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AP000389 EMBL:BT010504 EMBL:AK175589 EMBL:AK175730
IPI:IPI00520605 RefSeq:NP_189667.1 UniGene:At.36776
ProteinModelPortal:Q9LJV5 SMR:Q9LJV5 PaxDb:Q9LJV5 PRIDE:Q9LJV5
EnsemblPlants:AT3G30460.1 GeneID:822758 KEGG:ath:AT3G30460
TAIR:At3g30460 eggNOG:NOG303537 HOGENOM:HOG000153031
InParanoid:Q9LJV5 OMA:AICREEL PhylomeDB:Q9LJV5
ProtClustDB:CLSN2915427 ArrayExpress:Q9LJV5 Genevestigator:Q9LJV5
Uniprot:Q9LJV5
Length = 147
Score = 135 (52.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 39/112 (34%), Positives = 53/112 (47%)
Query: 424 LDIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEE--P-----A 475
+D E + Y L G VNT G +EI L S T ++N E P A
Sbjct: 30 IDDEYLRYLHYLDSRSNHG-VNTFGSYDEIFGLVLGNSS--SCTRWLNAGEELPVVEFTA 86
Query: 476 SKDQEPGS--CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
+ E G C IC+E+ NE++ L C H YH EC+ WL +N CP+C+
Sbjct: 87 EEMMERGLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCR 138
>UNIPROTKB|Q9H0F5 [details] [associations]
symbol:RNF38 "RING finger protein 38" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 EMBL:CH471071
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 EMBL:AL161792
EMBL:AF394047 EMBL:AL136817 EMBL:AL354935 EMBL:BC033786
IPI:IPI00167875 IPI:IPI00375419 IPI:IPI00478430 RefSeq:NP_073618.3
RefSeq:NP_919309.1 RefSeq:NP_919310.1 RefSeq:NP_919311.1
RefSeq:NP_919313.1 UniGene:Hs.333503 PDB:1X4J PDBsum:1X4J
ProteinModelPortal:Q9H0F5 SMR:Q9H0F5 IntAct:Q9H0F5
PhosphoSite:Q9H0F5 DMDM:56749664 PRIDE:Q9H0F5 DNASU:152006
Ensembl:ENST00000259605 Ensembl:ENST00000350199
Ensembl:ENST00000353739 Ensembl:ENST00000357058
Ensembl:ENST00000377885 GeneID:152006 KEGG:hsa:152006
UCSC:uc003zzh.3 UCSC:uc003zzi.3 CTD:152006 GeneCards:GC09M036336
HGNC:HGNC:18052 HPA:HPA015853 MIM:612488 neXtProt:NX_Q9H0F5
PharmGKB:PA34438 HOGENOM:HOG000231638 HOVERGEN:HBG059283
InParanoid:Q9H0F5 OMA:FLLHPPH OrthoDB:EOG4TB4B7 PhylomeDB:Q9H0F5
ChiTaRS:RNF38 EvolutionaryTrace:Q9H0F5 GenomeRNAi:152006
NextBio:86839 ArrayExpress:Q9H0F5 Bgee:Q9H0F5 CleanEx:HS_RNF38
Genevestigator:Q9H0F5 GermOnline:ENSG00000137075 Uniprot:Q9H0F5
Length = 515
Score = 160 (61.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 424 LDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
LD+ED +YE LL L ER+G GL++ + QL + + P +
Sbjct: 410 LDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPNNHQS 458
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 459 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 507
Score = 42 (19.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 268 SSDPFLIHPPHLSPHHPPHLPPPGQ 292
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 95 YVP--YMPTLSSGMPVNHGSTDQLPSSRNFGV 124
Y P + PTL P+ + D L +FGV
Sbjct: 326 YPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV 357
>MGI|MGI:1920719 [details] [associations]
symbol:Rnf38 "ring finger protein 38" species:10090 "Mus
musculus" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0036126 "sperm flagellum"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
MGI:MGI:1920719 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GeneTree:ENSGT00670000097625 CTD:152006 HOGENOM:HOG000231638
HOVERGEN:HBG059283 OMA:FLLHPPH ChiTaRS:RNF38 EMBL:AK029650
EMBL:BC060730 EMBL:BC062976 IPI:IPI00221948 IPI:IPI00515598
RefSeq:NP_780410.2 UniGene:Mm.262859 ProteinModelPortal:Q8BI21
SMR:Q8BI21 PhosphoSite:Q8BI21 PRIDE:Q8BI21
Ensembl:ENSMUST00000098098 GeneID:73469 KEGG:mmu:73469
InParanoid:Q8BI21 NextBio:338343 Bgee:Q8BI21 CleanEx:MM_RNF38
Genevestigator:Q8BI21 GermOnline:ENSMUSG00000035696 Uniprot:Q8BI21
Length = 518
Score = 160 (61.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 424 LDIED---MSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
LD+ED +YE LL L ER+G GL++ + QL + + P++
Sbjct: 413 LDVEDGEVENYEALLNLAERLGEAKPRGLTKADI-EQLPSYRF----------NPSNHQS 461
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
E C++C D+ + + L C+HE+HA+C+ KWL CPIC+++A
Sbjct: 462 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 510
Score = 42 (19.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 297 NSSTFLQPPVNIQHLSFPHPPPPFQ 321
+S FL P ++ PH PPP Q
Sbjct: 271 SSDPFLIHPPHLSPHHPPHLPPPGQ 295
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 95 YVP--YMPTLSSGMPVNHGSTDQLPSSRNFGV 124
Y P + PTL P+ + D L +FGV
Sbjct: 329 YPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV 360
>TAIR|locus:2019150 [details] [associations]
symbol:AT1G74620 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990 EMBL:AC011765
eggNOG:NOG308217 IPI:IPI00536550 PIR:C96775 RefSeq:NP_177600.1
UniGene:At.52515 ProteinModelPortal:Q9CA55 SMR:Q9CA55
EnsemblPlants:AT1G74620.1 GeneID:843801 KEGG:ath:AT1G74620
TAIR:At1g74620 InParanoid:Q9CA55 PhylomeDB:Q9CA55
Genevestigator:Q9CA55 Uniprot:Q9CA55
Length = 249
Score = 149 (57.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 467 NYINLEEPASKDQEPGSCIICQEDYRDNEKI-GTLDCDHEYHAECLKKWLFIKNVCPICK 525
NY+N+ + +E G C IC EDY + I L CDHE+H +C+ KWL + ++CP+C+
Sbjct: 171 NYLNV----ATTEENG-CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCR 225
Query: 526 S 526
S
Sbjct: 226 S 226
>MGI|MGI:1261771 [details] [associations]
symbol:Rnf24 "ring finger protein 24" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1261771
Prosite:PS00518 GO:GO:0016021 GO:GO:0000139 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000004806 HOVERGEN:HBG058899
GeneTree:ENSGT00700000104226 CTD:11237 eggNOG:NOG299260 OMA:KQVIQKE
OrthoDB:EOG4VX26J EMBL:AK048813 EMBL:AK083665 EMBL:AK089207
IPI:IPI00221618 RefSeq:NP_848722.1 UniGene:Mm.477523
ProteinModelPortal:Q8BGI1 SMR:Q8BGI1 PhosphoSite:Q8BGI1
PRIDE:Q8BGI1 Ensembl:ENSMUST00000059372 Ensembl:ENSMUST00000110194
Ensembl:ENSMUST00000165420 GeneID:51902 KEGG:mmu:51902
InParanoid:Q8BGI1 NextBio:308218 Bgee:Q8BGI1 CleanEx:MM_RNF24
Genevestigator:Q8BGI1 GermOnline:ENSMUSG00000048911 Uniprot:Q8BGI1
Length = 148
Score = 133 (51.9 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
C +C ED++ +++G C H +H +CL KWL ++ VCP+C L
Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLVKWLEVRKVCPLCNMPVL 123
>RGD|1309384 [details] [associations]
symbol:Rnf24 "ring finger protein 24" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1309384 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:CH473949 OMA:KQVIQKE OrthoDB:EOG4VX26J
IPI:IPI00210207 UniGene:Rn.230520 SMR:D3ZVL8
Ensembl:ENSRNOT00000028869 UCSC:RGD:1309384 Uniprot:D3ZVL8
Length = 148
Score = 133 (51.9 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
C +C ED++ +++G C H +H +CL KWL ++ VCP+C L
Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLVKWLEVRKVCPLCNMPVL 123
>UNIPROTKB|Q32LD0 [details] [associations]
symbol:RNF24 "Ring finger protein 24" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000004806 HOVERGEN:HBG058899
GeneTree:ENSGT00700000104226 CTD:11237 eggNOG:NOG299260 OMA:KQVIQKE
OrthoDB:EOG4VX26J EMBL:DAAA02036176 EMBL:DAAA02036174
EMBL:DAAA02036175 EMBL:BC109640 IPI:IPI00697150
RefSeq:NP_001070520.1 UniGene:Bt.50892 SMR:Q32LD0
Ensembl:ENSBTAT00000010416 GeneID:767991 KEGG:bta:767991
InParanoid:Q32LD0 NextBio:20918346 Uniprot:Q32LD0
Length = 148
Score = 132 (51.5 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
C +C ED++ +++G C H +H +CL KWL ++ VCP+C L
Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 123
>UNIPROTKB|E2R402 [details] [associations]
symbol:RNF24 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104226 CTD:11237 OMA:KQVIQKE
EMBL:AAEX03013826 RefSeq:XP_850078.1 ProteinModelPortal:E2R402
SMR:E2R402 PRIDE:E2R402 Ensembl:ENSCAFT00000009937 GeneID:607703
KEGG:cfa:607703 NextBio:20893409 Uniprot:E2R402
Length = 148
Score = 132 (51.5 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
C +C ED++ +++G C H +H +CL KWL ++ VCP+C L
Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 123
>UNIPROTKB|Q9Y225 [details] [associations]
symbol:RNF24 "RING finger protein 24" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0016021 GO:GO:0000139
GO:GO:0046872 GO:GO:0008270 EMBL:CH471133 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL031670 HOGENOM:HOG000004806
HOVERGEN:HBG058899 EMBL:AL096778 EMBL:BT007406 EMBL:BC000213
EMBL:BC039584 EMBL:AL079313 IPI:IPI00797703 IPI:IPI00910656
RefSeq:NP_001127809.1 RefSeq:NP_001127810.1 RefSeq:NP_009150.1
UniGene:Hs.589884 PDB:2EP4 PDBsum:2EP4 ProteinModelPortal:Q9Y225
SMR:Q9Y225 STRING:Q9Y225 PhosphoSite:Q9Y225 DMDM:20139860
PaxDb:Q9Y225 PRIDE:Q9Y225 DNASU:11237 Ensembl:ENST00000336095
Ensembl:ENST00000358395 Ensembl:ENST00000432261
Ensembl:ENST00000545616 GeneID:11237 KEGG:hsa:11237 UCSC:uc002wkh.2
UCSC:uc002wki.2 CTD:11237 GeneCards:GC20M003912 HGNC:HGNC:13779
HPA:HPA011900 MIM:612489 neXtProt:NX_Q9Y225 PharmGKB:PA34428
eggNOG:NOG299260 InParanoid:Q9Y225 OMA:KQVIQKE OrthoDB:EOG4VX26J
PhylomeDB:Q9Y225 ChiTaRS:RNF24 EvolutionaryTrace:Q9Y225
GenomeRNAi:11237 NextBio:42770 Bgee:Q9Y225 CleanEx:HS_RNF24
Genevestigator:Q9Y225 GermOnline:ENSG00000101236 Uniprot:Q9Y225
Length = 148
Score = 132 (51.5 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
C +C ED++ +++G C H +H +CL KWL ++ VCP+C L
Sbjct: 78 CAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 123
>ZFIN|ZDB-GENE-080303-32 [details] [associations]
symbol:zgc:175214 "zgc:175214" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 ZFIN:ZDB-GENE-080303-32 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000004806
HOVERGEN:HBG058899 eggNOG:NOG262552 GeneTree:ENSGT00700000104226
EMBL:CR812943 EMBL:BC159258 IPI:IPI00481280 RefSeq:NP_001108199.1
UniGene:Dr.40552 SMR:B0JZN6 Ensembl:ENSDART00000030435
Ensembl:ENSDART00000137357 GeneID:557610 KEGG:dre:557610
NextBio:20882066 Uniprot:B0JZN6
Length = 155
Score = 130 (50.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
C +C E+++ +++G C H +H +CL KWL I++VCP+C
Sbjct: 90 CAVCLEEFKTRDELGVCPCSHTFHKKCLLKWLEIRSVCPMC 130
>ZFIN|ZDB-GENE-091204-454 [details] [associations]
symbol:si:ch1073-392o20.1 "si:ch1073-392o20.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-091204-454 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K15699 OMA:PIAGPPE
GeneTree:ENSGT00700000104226 EMBL:CABZ01074899 EMBL:CABZ01074900
EMBL:CU855950 IPI:IPI00934891 RefSeq:XP_002663295.2
Ensembl:ENSDART00000092836 GeneID:100329730 KEGG:dre:100329730
Uniprot:E7FGJ5
Length = 155
Score = 130 (50.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 473 EPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
+P + +C +C ED++ +++G L C H +H C+ KWL ++ VCP+C
Sbjct: 82 DPKKLNLHGQTCAVCLEDFKVKDELGVLPCQHAFHRRCVVKWLEVRCVCPMC 133
>ZFIN|ZDB-GENE-041114-40 [details] [associations]
symbol:rnf24 "ring finger protein 24" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-041114-40
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000004806 HOVERGEN:HBG058899
GeneTree:ENSGT00700000104226 CTD:11237 OMA:KQVIQKE EMBL:BX004888
EMBL:BC085525 IPI:IPI00506880 RefSeq:NP_001007353.1
UniGene:Dr.88655 SMR:Q5U3J0 Ensembl:ENSDART00000053681
GeneID:492480 KEGG:dre:492480 InParanoid:Q5U3J0 NextBio:20865041
Uniprot:Q5U3J0
Length = 149
Score = 129 (50.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
C +C E+++ +++G C H +H +CL KWL ++ VCP+C L
Sbjct: 78 CAVCLEEFKQKDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 123
>ZFIN|ZDB-GENE-081104-369 [details] [associations]
symbol:rnf165b "ring finger protein 165b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-081104-369 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CABZ01049924 EMBL:CT573450 IPI:IPI00890535 RefSeq:XP_701217.3
UniGene:Dr.65572 Ensembl:ENSDART00000109989 GeneID:572413
KEGG:dre:572413 CTD:572413 NextBio:20890947 Uniprot:F1R351
Length = 347
Score = 147 (56.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 34/99 (34%), Positives = 45/99 (45%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNY---INLEEPASKDQEPGSCII 486
SYEELL L +R+GNVN G + + R Y I ++E E C I
Sbjct: 240 SYEELLQLEDRLGNVNRGAVQATIERFTFPHKYKKRRPLELKIGMDEEELDTDE--KCTI 297
Query: 487 CQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C D E + L C H +H C+ +WL CPIC+
Sbjct: 298 CLSMLEDEEDVRRLPCMHLFHQACVDQWLATNKKCPICR 336
Score = 42 (19.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 305 PVNIQHLSFPH-PPPPFQGI 323
P H S H P PPFQ I
Sbjct: 72 PTAALHPSLNHIPAPPFQDI 91
Score = 37 (18.1 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 62 YDSAMFYGMPQYH 74
+D ++ G+PQYH
Sbjct: 166 WDLSVDPGLPQYH 178
>ZFIN|ZDB-GENE-040426-1277 [details] [associations]
symbol:rnf11a "ring finger protein 11a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-040426-1277 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG058444
EMBL:BC053118 IPI:IPI00485593 RefSeq:NP_957315.1 UniGene:Dr.85919
ProteinModelPortal:Q7T3H3 GeneID:393996 KEGG:dre:393996 CTD:393996
InParanoid:Q7T3H3 NextBio:20814964 ArrayExpress:Q7T3H3
Uniprot:Q7T3H3
Length = 146
Score = 111 (44.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 446 TGLSEEIVARQLKTRVYLSATNYINLEEPASK--DQEPGSCIICQEDYRDNEKIGTLDCD 503
T L+EE R + R+ L + +P S+ D++ C+IC D+ + I L C
Sbjct: 52 TQLTEEEQVR-IAQRIGLIQHLPRGIFDPGSEPSDKKIKECVICMMDFEYGDPIRFLPCM 110
Query: 504 HEYHAECLKKWLFIKNVCPIC 524
H YH +C+ WL CP C
Sbjct: 111 HIYHVDCIDAWLMRSFTCPSC 131
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 312 SFP-HPPPPFQ 321
S P PPPP+Q
Sbjct: 23 SLPGEPPPPYQ 33
>UNIPROTKB|E1BSQ8 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0005737 GO:GO:0045893 GO:GO:0043234
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030511
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842
GO:GO:0000209 GO:GO:0030579 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:AADN02040362 IPI:IPI00592682
ProteinModelPortal:E1BSQ8 Ensembl:ENSGALT00000034463
ArrayExpress:E1BSQ8 Uniprot:E1BSQ8
Length = 976
Score = 142 (55.0 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 45/162 (27%), Positives = 68/162 (41%)
Query: 379 GPV-PEALRQRSLPHLRVLPSDGVALLEIPDF--YEVGNFIDRHRD---MRLDIEDMSYE 432
GP+ P + P L L + L+ +PD Y +I D R ++E
Sbjct: 806 GPLHPHLAHYHAPPRLHHLQIGALPLM-VPDMAGYPHIRYISSGLDGTSFRGPFRG-NFE 863
Query: 433 ELLALGERIGNVNTGLSEEIVARQLKTRVYLSATN--YINLEEPASKDQEPGS------- 483
EL+ L ER+GNVN G ++ + R Y T + + +D E G+
Sbjct: 864 ELIHLEERLGNVNRGATQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEK 923
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C IC + E + L C H +H C+ +WL CPIC+
Sbjct: 924 CTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 965
Score = 62 (26.9 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 85/355 (23%), Positives = 127/355 (35%)
Query: 10 SQMIDLEMDQQNRGYLLPEPCVVLGGVTSFPQPMQTIVRASGNTSSL-------DAHQHY 62
++++DL +D+ EP VV TS Q + AS N+SS DA +
Sbjct: 362 AEVVDLTVDED-------EPTVV--PTTSARVEPQVVSSASSNSSSTSTSEQASDAASNV 412
Query: 63 DSAMFYGMPQY-HGVHHHHAASVDLGAST---ASNLYV----PYMPTLSSGMPVNHGSTD 114
++ P+ + + A G T ASN + P MP L S P H
Sbjct: 413 STSQPSAAPETTSSLPNSSTAGTSAGDDTRRTASNTTLETGPPAMPRLPSCCP-QHSPCG 471
Query: 115 QLPSSRNFGVIG----ASAEEYGRNSHFMDNVRGSYKRKNTEGFPGSFQNLNAPAXXXXX 170
SS+N +G + +++G HF + + SF + N P
Sbjct: 472 G--SSQNHHALGHPHTSCFQQHGH--HFQHHHHHHHNPHPAVPLSPSFSDSNCPVERPPP 527
Query: 171 V-APLHPRHPDGVTPMDAACFSLP-QYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAH 228
V AP G + D +LP NG + S S T DP
Sbjct: 528 VPAPCGASSSSGTSYHDQQ--ALPVDLSSNG------IRSHGS--GAFHGTSAFDPCCPG 577
Query: 229 SHNHF-IQGNFIGQ-PFQPA---GW----LEQPSDGGGSSWTQAPAIPYMHGSNVS-GAP 278
S + I G+ G P Q G+ + QP + + YMH S P
Sbjct: 578 SSSRTAIYGHQTGAGPSQSLTIDGYGSSMVAQPQPQPPPQASLSSCRHYMHSPYASLTRP 637
Query: 279 MDSGNMVVQRYPETAGNRNSSTFLQPPVNIQHLSFPHPPPPFQ-GIRNHNTNVHP 332
+ + P + GN QPP + ++ PHP PF I +H ++ HP
Sbjct: 638 L---HHQASACPHSHGNPPPQP--QPPPQVDYV-IPHPVHPFHPSISSHASS-HP 685
Score = 49 (22.3 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 22 RGYLL-PEPCVVLGGVTSFPQPMQTIVRASGNTSS 55
+G LL PEP +G SFP ++ I GN S
Sbjct: 17 KGILLNPEP---IGAAKSFPAEVEMIASKVGNEFS 48
Score = 39 (18.8 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 304 PPVNIQHLSFPHPPPP 319
P ++ S P PPPP
Sbjct: 675 PSISSHASSHPVPPPP 690
>FB|FBgn0038627 [details] [associations]
symbol:CG7694 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00530000062967 eggNOG:NOG294567 EMBL:BT001518
RefSeq:NP_001138076.1 RefSeq:NP_650729.1 UniGene:Dm.14942
ProteinModelPortal:Q9VE61 SMR:Q9VE61 PaxDb:Q9VE61 PRIDE:Q9VE61
EnsemblMetazoa:FBtr0083632 EnsemblMetazoa:FBtr0290211 GeneID:42230
KEGG:dme:Dmel_CG7694 UCSC:CG7694-RA FlyBase:FBgn0038627
InParanoid:Q9VE61 OMA:HEFHEEC OrthoDB:EOG4DV43R PhylomeDB:Q9VE61
GenomeRNAi:42230 NextBio:827789 Uniprot:Q9VE61
Length = 147
Score = 122 (48.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 444 VNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCD 503
+ G+ EI + R L + ++ D E C +C+E + +K L C
Sbjct: 33 IMNGIDMEIEVPEASKRAILELPVHEIVKSDEGGDLE---CSVCKEPAEEGQKYRILPCK 89
Query: 504 HEYHAECLKKWLFIKNVCPICKSE 527
HE+H EC+ WL N CP+C+ E
Sbjct: 90 HEFHEECILLWLKKTNSCPLCRYE 113
>TAIR|locus:2053225 [details] [associations]
symbol:AT2G28920 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC005727
EMBL:BT030073 IPI:IPI00534079 PIR:E84690 RefSeq:NP_180458.1
UniGene:At.52958 ProteinModelPortal:Q9ZV22 SMR:Q9ZV22 PaxDb:Q9ZV22
EnsemblPlants:AT2G28920.1 GeneID:817441 KEGG:ath:AT2G28920
TAIR:At2g28920 eggNOG:NOG317926 HOGENOM:HOG000154045
InParanoid:Q9ZV22 OMA:ICRAPFQ PhylomeDB:Q9ZV22
ProtClustDB:CLSN2913203 Genevestigator:Q9ZV22 Uniprot:Q9ZV22
Length = 145
Score = 122 (48.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 484 CIICQEDYRDNEKIGTL-DCDHEYHAECLKKWLFIKNVCPICKS 526
C+IC ED++ N+ + L C H +H +C+ W F K CPIC++
Sbjct: 93 CVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICRA 136
>ZFIN|ZDB-GENE-100209-1 [details] [associations]
symbol:rnf6 "ring finger protein (C3H2C3 type) 6"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-100209-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104290
OMA:TIRIPLR EMBL:AL929009 IPI:IPI00902140
Ensembl:ENSDART00000109587 Uniprot:F1R4P2
Length = 734
Score = 134 (52.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 447 GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEY 506
GL++E + L TR Y +NLE ++ +C +C +Y K+ L C HE+
Sbjct: 657 GLTKEQIDN-LVTRTY----GQVNLE-----GEQGRACSVCINEYAQGNKLRRLPCAHEF 706
Query: 507 HAECLKKWLFIKNVCPICKSEALAT 531
H C+ +WL N CPIC+ L++
Sbjct: 707 HIHCIDRWLSENNTCPICRQPILSS 731
Score = 60 (26.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 25/86 (29%), Positives = 31/86 (36%)
Query: 314 PHPPPPFQGIRNHNTNVHPQVAAA-SFRVPSSYRTMNISQDGSEMVPR-HMGPVPPTGFR 371
P PPPP Q T +P AA S + P+ Y T + V R PP
Sbjct: 212 PPPPPPVQSASPPTTPYNPSRAAPYSLQHPTPYSTSRPTLGRRGAVRRTRSSTTPPV--- 268
Query: 372 IYRSPREGPVPEALRQRSLPHLRVLP 397
P P +R+LP L P
Sbjct: 269 --MPPMTSQAPPMPLRRNLPTLPSSP 292
Score = 49 (22.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/102 (24%), Positives = 42/102 (41%)
Query: 304 PPVNIQ-HL-SFPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRH 361
PP+ ++ +L + P PPP + + + +V +S + Q+GSE P
Sbjct: 277 PPMPLRRNLPTLPSSPPPQAPLAFQSQETDGGAVRSQIQVTTSSVNTGVEQNGSEG-PDC 335
Query: 362 MGPVPPTGFRIYRSPREGPVPEALRQRSLPHLRVLPSDGVAL 403
P + ++ + RE P R RS +R G AL
Sbjct: 336 PNVQPQSDPQVAPAARE---PRNSRTRSRGRVRRAAGAGGAL 374
>TAIR|locus:2159320 [details] [associations]
symbol:AT5G60820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 EMBL:AB015472 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 IPI:IPI00538810 RefSeq:NP_200890.1 UniGene:At.43736
ProteinModelPortal:Q9FJH4 SMR:Q9FJH4 PRIDE:Q9FJH4
EnsemblPlants:AT5G60820.1 GeneID:836203 KEGG:ath:AT5G60820
TAIR:At5g60820 eggNOG:NOG239027 HOGENOM:HOG000148336
InParanoid:Q9FJH4 OMA:MENDDDA PhylomeDB:Q9FJH4
ProtClustDB:CLSN2686704 Genevestigator:Q9FJH4 Uniprot:Q9FJH4
Length = 419
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/108 (25%), Positives = 56/108 (51%)
Query: 424 LDIEDMSYEELLALGERI----GNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQ 479
+D E+ YE+ L E +++G+ + ++ + +S ++ E+ D
Sbjct: 311 IDHEEEDYEDYLHTTEYEMLFEAEISSGIGKPPASKSFIKNLKVSP---LSNEDVMENDD 367
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
+ C +C+E+ +++ L C H+YH+EC+ WL I+N CP+C+ E
Sbjct: 368 DAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFE 415
>ZFIN|ZDB-GENE-091118-64 [details] [associations]
symbol:rnf165a "ring finger protein 165a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-091118-64 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CU466271 IPI:IPI01007348 Ensembl:ENSDART00000097796
Bgee:E9QHW9 Uniprot:E9QHW9
Length = 311
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVAR-----QLKTRVYLSATNYINLEEPASKDQEPGSC 484
SYEELL L +R+G+V+ G + + R + K R L + +E + D++ C
Sbjct: 204 SYEELLQLEDRLGSVSRGAIQTTIERFTFPHKYKKRKPLDL-KFCENDEESDVDEK---C 259
Query: 485 IICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
IC D E + L C H +H C+ +WL CPIC+
Sbjct: 260 TICLSMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICR 300
>UNIPROTKB|F1RPS5 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:FP015922
Ensembl:ENSSSCT00000004974 Uniprot:F1RPS5
Length = 327
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/98 (31%), Positives = 44/98 (44%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSAT--NYINLEEPASKDQEPGSCIIC 487
SYEELL L +R+GNV G + + R Y + +E + C IC
Sbjct: 219 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTIC 278
Query: 488 QEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
D E + L C H +H C+ +WL + CPIC+
Sbjct: 279 LSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 316
>UNIPROTKB|I3LPH2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:FP015922
Ensembl:ENSSSCT00000022369 Uniprot:I3LPH2
Length = 329
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/98 (31%), Positives = 44/98 (44%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSAT--NYINLEEPASKDQEPGSCIIC 487
SYEELL L +R+GNV G + + R Y + +E + C IC
Sbjct: 221 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTIC 280
Query: 488 QEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
D E + L C H +H C+ +WL + CPIC+
Sbjct: 281 LSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 318
>UNIPROTKB|F1MJP2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:DAAA02056918
IPI:IPI00695048 Ensembl:ENSBTAT00000001499 Uniprot:F1MJP2
Length = 350
Score = 140 (54.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/98 (31%), Positives = 44/98 (44%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSAT--NYINLEEPASKDQEPGSCIIC 487
SYEELL L +R+GNV G + + R Y + +E + C IC
Sbjct: 242 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTIC 301
Query: 488 QEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
D E + L C H +H C+ +WL + CPIC+
Sbjct: 302 LSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 339
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 30 CVVLGGVTSFPQPMQ 44
CVV+G VTS P Q
Sbjct: 12 CVVVGSVTSPGAPFQ 26
>GENEDB_PFALCIPARUM|PF14_0215 [details] [associations]
symbol:PF14_0215 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:AE014187 Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10601
RefSeq:XP_001348389.2 ProteinModelPortal:Q8ILM8
EnsemblProtists:PF14_0215:mRNA GeneID:811797 KEGG:pfa:PF14_0215
EuPathDB:PlasmoDB:PF3D7_1422500 HOGENOM:HOG000281286
ProtClustDB:CLSZ2514572 Uniprot:Q8ILM8
Length = 510
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 466 TNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
T + N E K E G+CIIC++D ++ K L C H +H +CLK W + CPIC+
Sbjct: 282 TKFANATEEELK--EAGTCIICRDDLKEGSK--KLSCSHIFHVDCLKSWFIQQQTCPICR 337
Query: 526 SE 527
+E
Sbjct: 338 TE 339
>UNIPROTKB|Q8ILM8 [details] [associations]
symbol:PF14_0215 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:AE014187 Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10601
RefSeq:XP_001348389.2 ProteinModelPortal:Q8ILM8
EnsemblProtists:PF14_0215:mRNA GeneID:811797 KEGG:pfa:PF14_0215
EuPathDB:PlasmoDB:PF3D7_1422500 HOGENOM:HOG000281286
ProtClustDB:CLSZ2514572 Uniprot:Q8ILM8
Length = 510
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 466 TNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
T + N E K E G+CIIC++D ++ K L C H +H +CLK W + CPIC+
Sbjct: 282 TKFANATEEELK--EAGTCIICRDDLKEGSK--KLSCSHIFHVDCLKSWFIQQQTCPICR 337
Query: 526 SE 527
+E
Sbjct: 338 TE 339
>UNIPROTKB|Q6ZSG1 [details] [associations]
symbol:RNF165 "RING finger protein 165" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018931 EMBL:AK127467 EMBL:AK122819
EMBL:AC015959 EMBL:AC021763 IPI:IPI00161541 RefSeq:NP_001243687.1
RefSeq:NP_689683.2 UniGene:Hs.501114 ProteinModelPortal:Q6ZSG1
SMR:Q6ZSG1 IntAct:Q6ZSG1 STRING:Q6ZSG1 DMDM:74762404 PRIDE:Q6ZSG1
Ensembl:ENST00000269439 Ensembl:ENST00000543885 GeneID:494470
KEGG:hsa:494470 UCSC:uc002lby.1 CTD:494470 GeneCards:GC18P043914
HGNC:HGNC:31696 neXtProt:NX_Q6ZSG1 PharmGKB:PA134972127
eggNOG:NOG243435 HOGENOM:HOG000154155 HOVERGEN:HBG093904
InParanoid:Q6ZSG1 OMA:FSHQLQT OrthoDB:EOG4J6RRC PhylomeDB:Q6ZSG1
GenomeRNAi:494470 NextBio:111870 ArrayExpress:Q6ZSG1 Bgee:Q6ZSG1
CleanEx:HS_RNF165 Genevestigator:Q6ZSG1 GermOnline:ENSG00000141622
Uniprot:Q6ZSG1
Length = 346
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 78/329 (23%), Positives = 114/329 (34%)
Query: 211 SVRNRLVATGGMDPVLAHSHNHFIQGNFIGQPFQPAGWLEQPSDGG-GSSWTQAPAIPYM 269
SVRNR A S HF G Q P L P G S APA +
Sbjct: 16 SVRNRGAPFQRSQHPHATSCRHFHLGPPQPQQLAPDFPLAHPVQSQPGLSAHMAPAHQHS 75
Query: 270 HGSNVSGAPMDSGNMVVQRYPETAGNRNSSTFL--QPPVNIQHLSF-PHPPPPFQGIRNH 326
+ S P+ + P +L Q + QH HP + + H
Sbjct: 76 GALHQSLTPLPTLQFQDVTGPSFLPQALHQQYLLQQQLLEAQHRRLVSHPRRSQERVSVH 135
Query: 327 NTNVHPQVAAASFRVPSS-YRT----MNISQD-GSEMVPRHMGPVPPTGFRIYRSPREGP 380
+HP + P Y ++S D G + P+P +PR
Sbjct: 136 PHRLHPSFDFGQLQTPQPRYLAEGTDWDLSVDAGLSPAQFQVRPIPQHYQHYLATPRMHH 195
Query: 381 VPE--ALRQRSLPHLRVLPSDGVALLEIPDFYEVGNFIDRHRDMRLDIEDMSYEELLALG 438
P + Q + +R P + L + G RH + + SYEELL L
Sbjct: 196 FPRNSSSTQMVVHEIRNYPYPQLHFLALQ-----GLNPSRHTSA---VRE-SYEELLQLE 246
Query: 439 ERIGNVNTGLSEEIVARQLKTRVYLSAT--NYINLEEPASKDQEPGSCIICQEDYRDNEK 496
+R+GNV G + + R Y + ++ + C IC D E
Sbjct: 247 DRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGED 306
Query: 497 IGTLDCDHEYHAECLKKWLFIKNVCPICK 525
+ L C H +H C+ +WL + CPIC+
Sbjct: 307 VRRLPCMHLFHQLCVDQWLAMSKKCPICR 335
>UNIPROTKB|E2R7H1 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 CTD:54778 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:AAEX03016176 EMBL:AAEX03016177
EMBL:AAEX03016178 RefSeq:XP_535498.2 ProteinModelPortal:E2R7H1
Ensembl:ENSCAFT00000026314 GeneID:478323 KEGG:cfa:478323
Uniprot:E2R7H1
Length = 985
Score = 152 (58.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINL--EEPASKDQEPGSCIIC 487
++EEL+ L ER+GNVN G S+ + R Y + EE +D E C IC
Sbjct: 878 NFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEE-KCTIC 936
Query: 488 QEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
+ E + L C H +H C+ +WL CPIC+
Sbjct: 937 LSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 974
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 28/111 (25%), Positives = 38/111 (34%)
Query: 49 ASGNTSSLDAHQHYDSAMFYGMPQYHGVHHHHAASVDLGASTASNLYVPYMPTLSS-GMP 107
+S N +L H H +G +H HHHH A VP P+ S P
Sbjct: 490 SSQNHHAL-GHPHAGCFQQHG---HHFQHHHHHHHTPHPA-------VPVSPSFSDPACP 538
Query: 108 VNHGSTDQLPSSRNFGVIGASAEEYGRNSHF-MDNVRGSYKRKNTEGFPGS 157
V Q P N +SA Y +D + + GF G+
Sbjct: 539 VERPPQVQAPCGAN----SSSATSYHDQQALPVDLSNNGIRSHGSGGFHGA 585
Score = 41 (19.5 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 175 HPRHPDGVTPMDAACF---SLPQYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAHSHN 231
+P P G D S PQ N ++ +S+ + + + L HS +
Sbjct: 288 NPTVPSGSIDEDVVVIEASSTPQVTANEEINVTSTDSEVEIVT-VGESYRSRSTLGHSRS 346
Query: 232 HFIQGN--FIGQPFQP 245
H+ QG+ +P +P
Sbjct: 347 HWSQGSNSHTSRPQEP 362
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 262 QAPAIPYMHGSNVSGA-PMDSGNMVVQR-----YPETAGNRNSSTFLQPP-VNIQHLSFP 314
QA A P+ HG+ P + V+ + + + + S PP ++ + P
Sbjct: 659 QASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQISSHATSHPVAPPPPTHLASTAAP 718
Query: 315 ---HPPPPFQGIRNH 326
H PP Q I +H
Sbjct: 719 IPQHLPPTHQPISHH 733
>UNIPROTKB|Q5R476 [details] [associations]
symbol:RNF111 "E3 ubiquitin-protein ligase Arkadia"
species:9601 "Pongo abelii" [GO:0032184 "SUMO polymer binding"
evidence=ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0032184 CTD:54778 HOVERGEN:HBG093884 KO:K10635
EMBL:CR861381 RefSeq:NP_001124565.1 UniGene:Pab.18469
ProteinModelPortal:Q5R476 GeneID:100169738 KEGG:pon:100169738
InParanoid:Q5R476 Uniprot:Q5R476
Length = 986
Score = 152 (58.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINL--EEPASKDQEPGSCIIC 487
++EEL+ L ER+GNVN G S+ + R Y + EE +D E C IC
Sbjct: 879 NFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEE-KCTIC 937
Query: 488 QEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
+ E + L C H +H C+ +WL CPIC+
Sbjct: 938 LSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 975
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 49 ASGNTSSLDAHQHYDSAMFYGMPQYHGVHHHH 80
+S N +L H H +G H HHHH
Sbjct: 490 SSQNHHAL-GHPHTSCFQQHGHHFQHHHHHHH 520
Score = 41 (19.5 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 175 HPRHPDGVTPMDAACF---SLPQYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAHSHN 231
+P P G D S PQ N ++ +S+ + + + L HS +
Sbjct: 288 NPAVPSGSIDEDVVVIEASSTPQVTANEEINVTSTDSEVEIVT-VGESYRSRSTLGHSRS 346
Query: 232 HFIQGN--FIGQPFQP 245
H+ QG+ +P +P
Sbjct: 347 HWSQGSSSHASRPQEP 362
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 262 QAPAIPYMHGSNVSGA-PMDSGNMVVQR-----YPETAGNRNSSTFLQPP-VNIQHLSFP 314
QA A P+ HG+ P + V+ + + + + S PP ++ + P
Sbjct: 660 QASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQISSHATSHPVAPPPPTHLASTAAP 719
Query: 315 ---HPPPPFQGIRNH 326
H PP Q I +H
Sbjct: 720 IPQHLPPTHQPISHH 734
>ASPGD|ASPL0000004006 [details] [associations]
symbol:AN10760 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 EMBL:BN001301
Gene3D:3.30.40.10 InterPro:IPR013083 EnsemblFungi:CADANIAT00007111
OMA:GERCLIC Uniprot:C8V3K2
Length = 831
Score = 127 (49.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 35/135 (25%), Positives = 65/135 (48%)
Query: 410 YEVG-NFIDRHRDMR---LDIEDMSYEELLALGERIGNVNTGLS--EEIVARQLKTRVYL 463
Y VG N + H L ++ +YE+++ L +G V ++ E++++ RV
Sbjct: 681 YVVGTNLSENHPAFAAPSLFTDNPTYEDMVLLSSLLGPVKPPVATQEDLISAGGLYRVVK 740
Query: 464 SATNYINLEEPASKD---QEPGSCIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFI-K 518
+ ++ E C+IC +Y E++ L C+H YH +C+ +WL +
Sbjct: 741 CGDSMSAAAVDGTRTIQISEGERCLICLSEYEVAEELRQLTKCEHLYHRDCIDQWLTTGR 800
Query: 519 NVCPICKSEALATKS 533
N CP+C+ + +A KS
Sbjct: 801 NSCPLCRGQGVADKS 815
Score = 66 (28.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 237 NFIGQPFQPAGWLE-QPSDGGGSSWTQAPAIPYMHGSNVSGAPMDSGNMVVQRYPETAGN 295
+F+ PF P G L +P ++ + A +NV G+ + G+ V R G+
Sbjct: 499 DFLRLPFFPPGTLSPRPGPRPETTTSDHSASSSAPPANVDGS-IQPGSPNVPRRLSDVGS 557
Query: 296 RNSSTFLQPPVNIQHLSFPHPPP 318
R + + L P V + PHPPP
Sbjct: 558 RGTLSSL-PSVVSESPPGPHPPP 579
Score = 45 (20.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 17/65 (26%), Positives = 23/65 (35%)
Query: 308 IQHLSFPHPPPPFQGIRNHNTNVHPQVAAASFRVPSSYRTMNIS---QDGSEMVPRHMGP 364
+ L P PP G + P+ + SS N+ Q GS VPR +
Sbjct: 498 LDFLRLPFFPP---GTLSPRPGPRPETTTSDHSASSSAPPANVDGSIQPGSPNVPRRLSD 554
Query: 365 VPPTG 369
V G
Sbjct: 555 VGSRG 559
>TAIR|locus:2034934 [details] [associations]
symbol:AT1G18770 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC011809
eggNOG:NOG268870 IPI:IPI00542029 RefSeq:NP_173312.1
UniGene:At.51668 ProteinModelPortal:Q3ED97 SMR:Q3ED97
EnsemblPlants:AT1G18770.1 GeneID:838459 KEGG:ath:AT1G18770
TAIR:At1g18770 HOGENOM:HOG000131773 InParanoid:Q3ED97 OMA:NAKIDGY
PhylomeDB:Q3ED97 ProtClustDB:CLSN2914190 Genevestigator:Q3ED97
Uniprot:Q3ED97
Length = 106
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 25/94 (26%), Positives = 45/94 (47%)
Query: 432 EELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDY 491
E + + +I N + ++V + L ++Y T S E CIIC E++
Sbjct: 18 EGTITVNAKIDGYNPTPASKLVVKSLARKIYKMTT---------SSTGE--MCIICLEEF 66
Query: 492 RDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
+ ++ TL C H++ EC+ KW + CP+C+
Sbjct: 67 SEGRRVVTLPCGHDFDDECVLKWFETNHSCPLCR 100
>MGI|MGI:2444521 [details] [associations]
symbol:Rnf165 "ring finger protein 165" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:2444521
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 UniGene:Mm.23293 GeneTree:ENSGT00670000097625
CTD:494470 eggNOG:NOG243435 OMA:FSHQLQT EMBL:AC102135 EMBL:AK133955
IPI:IPI00266063 RefSeq:NP_001157976.1 ProteinModelPortal:E9QAU8
SMR:E9QAU8 PRIDE:E9QAU8 Ensembl:ENSMUST00000026494 GeneID:225743
KEGG:mmu:225743 HOGENOM:HOG000171096 HOVERGEN:HBG101911
NextBio:377780 Bgee:E9QAU8 Uniprot:E9QAU8
Length = 347
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSAT--NYINLEEPASKDQEPGSCIIC 487
SYEELL L +R+GNV G + + R Y + ++ + C IC
Sbjct: 239 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTIC 298
Query: 488 QEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
D E + L C H +H C+ +WL + CPIC+
Sbjct: 299 LSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 336
>RGD|1560744 [details] [associations]
symbol:Rnf165 "ring finger protein 165" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1560744 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 OMA:FSHQLQT IPI:IPI00367219
Ensembl:ENSRNOT00000028929 Uniprot:E9PSS3
Length = 348
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSAT--NYINLEEPASKDQEPGSCIIC 487
SYEELL L +R+GNV G + + R Y + ++ + C IC
Sbjct: 240 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTIC 299
Query: 488 QEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
D E + L C H +H C+ +WL + CPIC+
Sbjct: 300 LSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 337
>UNIPROTKB|F1PHU2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:AAEX03005372
EMBL:AAEX03005373 Ensembl:ENSCAFT00000027965 Uniprot:F1PHU2
Length = 347
Score = 141 (54.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 31/98 (31%), Positives = 44/98 (44%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSAT--NYINLEEPASKDQEPGSCIIC 487
SYEELL L +R+GNV G + + R Y + +E + C IC
Sbjct: 239 SYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTIC 298
Query: 488 QEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
D E + L C H +H C+ +WL + CPIC+
Sbjct: 299 LSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 336
Score = 39 (18.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 32/154 (20%), Positives = 62/154 (40%)
Query: 199 GTPSIREVESQRSVRNRLVATGGMDPVLAHSHNHFIQGNFIGQPFQPAGWLEQPSDGGGS 258
G P +++ + + + + G+ P +A +H H G + Q P L+ G S
Sbjct: 41 GPPQPQQLAPDFPLAHPVQSQPGLSPHMAPAHQH--SGT-LHQSLTPLPTLQFQDVTGPS 97
Query: 259 SWTQAPAIPYMHGSNVSGAPMDSGNMVVQRYPETAGNRNS--STFLQPPVNIQH-LSFPH 315
QA Y+ + +++ + + +P + R S L P + H L P
Sbjct: 98 FLPQALHQQYLLQQQL----LEAQHRRLVSHPRRSQERVSVHPHRLHPSFDFGHQLQTPQ 153
Query: 316 PPPPFQGIRNHNTNVHPQVAAASFRV---PSSYR 346
P +G + + +V ++ A F+V P Y+
Sbjct: 154 PRYLAEGT-DWDLSVDAGLSPAQFQVRPIPQHYQ 186
>RGD|1310097 [details] [associations]
symbol:Rnf111 "ring finger protein 111" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA;ISO] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA;ISO] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA;ISO] [GO:0032184 "SUMO polymer
binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046332 "SMAD
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1310097 GO:GO:0005737
GO:GO:0045893 GO:GO:0043234 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0004842 GO:GO:0007389 GO:GO:0000209
GO:GO:0030579 EMBL:CH474041 CTD:54778 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 OrthoDB:EOG4MSCXR IPI:IPI00370163
RefSeq:NP_001100306.1 UniGene:Rn.82537 Ensembl:ENSRNOT00000017918
GeneID:300813 KEGG:rno:300813 UCSC:RGD:1310097 NextBio:647579
Uniprot:D4A9T1
Length = 987
Score = 144 (55.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATN--YINLEEPASKDQEPGS---- 483
++EEL+ L ER+GNVN G S+ + R Y T + + +D E G+
Sbjct: 872 NFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDT 931
Query: 484 ---CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C IC + E + L C H +H C+ +WL CPIC+
Sbjct: 932 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 976
Score = 49 (22.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 28/111 (25%), Positives = 40/111 (36%)
Query: 27 PEPCVVLGGVTSF-PQPMQTIVRASGNTSSLDAHQHYDSA-MFYGMPQYHGVHHH--HAA 82
P P L + P P ++ RA + +S H H + PQ V H HA
Sbjct: 626 PPPQPSLSSCRHYMPPPYASLTRALHHQASACHHSHGSAPPQTQPPPQVDYVIPHPVHAF 685
Query: 83 SVDLGASTASNLYVPYMPTL--SSGMPV-NHGSTDQLPSSRNFGVIGASAE 130
+ AS+ P PT S+ P+ H P S + SA+
Sbjct: 686 HSQISTHAASHPVAPPPPTHLGSTAAPIPQHLPPAHQPISHHIPAPAPSAQ 736
Score = 46 (21.3 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 58 AHQHYDSAMFYGMPQYHGVHHHH 80
AH H +G H HHHH
Sbjct: 494 AHPHSSCFQQHGHHFQHHHHHHH 516
Score = 43 (20.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 17/69 (24%), Positives = 29/69 (42%)
Query: 173 PLHPRHPDGVTPMDA----ACFSLPQYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAH 228
P +P P G D A F+ PQ N ++ +S+ + + + L H
Sbjct: 282 PSNPAAPSGSIDEDVVVIEASFT-PQVTANEEINVTSTDSEVEIVT-VGESYRSRSTLGH 339
Query: 229 SHNHFIQGN 237
S +H+ QG+
Sbjct: 340 SRSHWSQGS 348
Score = 40 (19.1 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 25 LLPEPCVVLGGVTSFPQPMQTIVRASGNTSS 55
L P+P LG SFP ++ I GN S
Sbjct: 38 LHPQP---LGATKSFPAEVEMINSKVGNEFS 65
>DICTYBASE|DDB_G0268162 [details] [associations]
symbol:DDB_G0268162 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0268162
GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000003 Gene3D:3.30.40.10
InterPro:IPR013083 RefSeq:XP_647599.1 ProteinModelPortal:Q55FD4
EnsemblProtists:DDB0189822 GeneID:8616411 KEGG:ddi:DDB_G0268162
eggNOG:NOG268870 InParanoid:Q55FD4 OMA:YNIEESE Uniprot:Q55FD4
Length = 476
Score = 129 (50.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 36/103 (34%), Positives = 56/103 (54%)
Query: 425 DIEDMS-YEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS 483
D +DM+ YE L L +R NV G+ + + ++LK +Y N+EE ++ GS
Sbjct: 381 DPDDMNQYEHYLEL-DR-NNVPRGVPDSEI-KKLKRIIY-------NIEE----SEKLGS 426
Query: 484 -CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C ICQE +++ E + +L C H Y E + KW N CP+C+
Sbjct: 427 ICCICQEPFKNGESLISLPCLHRYCEEEIMKWFESNNTCPLCR 469
Score = 56 (24.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 59 HQHYDSAMFYGMPQYHGVHHHH 80
+QH DS G Q H HHHH
Sbjct: 339 NQHNDSLNNSGHAQQHHHHHHH 360
Score = 38 (18.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 50 SGNTS-SLDAH--QHYDSAMFYGMPQYH------GVHHHHAASV 84
+ N S L H QH++++ + Q H VHHHH V
Sbjct: 199 NNNASLPLQQHHQQHFNNSHGSQLVQMHLQAHQQVVHHHHVHHV 242
>TAIR|locus:2154729 [details] [associations]
symbol:AT5G53910 species:3702 "Arabidopsis thaliana"
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AB007644 EMBL:DQ059094 IPI:IPI00540264 RefSeq:NP_200202.1
UniGene:At.55536 ProteinModelPortal:Q9FN35 SMR:Q9FN35
EnsemblPlants:AT5G53910.1 GeneID:835474 KEGG:ath:AT5G53910
TAIR:At5g53910 eggNOG:NOG306750 HOGENOM:HOG000152571
InParanoid:Q9FN35 OMA:CIMEWFK PhylomeDB:Q9FN35
ProtClustDB:CLSN2916335 Genevestigator:Q9FN35 Uniprot:Q9FN35
Length = 230
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 422 MRLDIEDMSYEELLALGERIGNVNTG-LSEEIVARQLKTR-VYLSATNYINLEEPASKDQ 479
+ LD+ ++ E + N+ G LS I R+ KT + +T Y+ E S +
Sbjct: 110 LTLDVAPLNEYERNSEYRPASNLRVGALSRRIYKRKQKTSSIANKSTRYMRKRETYSSGE 169
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
C IC ++++ ++ TL C HE+ +C+ +W ++ CP+C+ E
Sbjct: 170 Y--KCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYNCPLCRFE 215
>TAIR|locus:2034210 [details] [associations]
symbol:AT1G80400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AC018848 eggNOG:NOG273848 HOGENOM:HOG000239557
ProtClustDB:CLSN2691130 EMBL:AY062845 EMBL:BT000070 EMBL:AK317002
IPI:IPI00535746 PIR:G96835 RefSeq:NP_178156.1 UniGene:At.19651
UniGene:At.48403 ProteinModelPortal:Q9C965 SMR:Q9C965
EnsemblPlants:AT1G80400.1 GeneID:844380 KEGG:ath:AT1G80400
TAIR:At1g80400 InParanoid:Q9C965 OMA:ELPCTHF PhylomeDB:Q9C965
ArrayExpress:Q9C965 Genevestigator:Q9C965 Uniprot:Q9C965
Length = 407
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
E SC IC Y D+E++ L C H +H +C+ KWL I CP+CK+E
Sbjct: 351 EDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNE 398
>UNIPROTKB|F1S053 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:CU582792 EMBL:CU464072
Ensembl:ENSSSCT00000005070 Uniprot:F1S053
Length = 994
Score = 144 (55.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATN--YINLEEPASKDQEPGS---- 483
++EEL+ L ER+GNVN G S+ + R Y T + + +D E G+
Sbjct: 879 NFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDT 938
Query: 484 ---CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C IC + E + L C H +H C+ +WL CPIC+
Sbjct: 939 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 983
Score = 48 (22.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 49 ASGNTSSLDAHQHYDSAMFYGMPQYHGVHHHHAA 82
+S N +L H H +G H HHHH A
Sbjct: 491 SSQNHHAL-GHPHTSCFQQHGHHFQHHHHHHHTA 523
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 175 HPRHPDGVTPMDAACF---SLPQYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAHSHN 231
+P P G D S PQ N ++ +S+ + + + L HS +
Sbjct: 287 NPTVPSGSIDEDVVVIEASSTPQVTANEEINVTSTDSEVEIVT-VGESYRSRSTLGHSRS 345
Query: 232 HFIQGN--FIGQPFQP 245
H+ QG+ +P +P
Sbjct: 346 HWSQGSSSHTSRPQEP 361
>TAIR|locus:4010713708 [details] [associations]
symbol:AT2G44578 "AT2G44578" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG282867
IPI:IPI00846938 RefSeq:NP_001078058.1 UniGene:At.36739
UniGene:At.75339 ProteinModelPortal:A8MS73 SMR:A8MS73
EnsemblPlants:AT2G44578.1 GeneID:5007961 KEGG:ath:AT2G44578
TAIR:At2g44578 HOGENOM:HOG000015208 OMA:AEGEKMR PhylomeDB:A8MS73
ProtClustDB:CLSN2681377 Genevestigator:A8MS73 Uniprot:A8MS73
Length = 145
Score = 117 (46.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 484 CIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPICKSE 527
C IC ED + EK+ + C H +H +C+ WL K+ CP+C++E
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAE 114
>TAIR|locus:2038766 [details] [associations]
symbol:RHA2B "RING-H2 finger protein 2B" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0080167
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AC006200
HOGENOM:HOG000090787 KO:K16282 ProtClustDB:CLSN2679440
EMBL:AF078823 IPI:IPI00526074 PIR:C84421 PIR:T51843
RefSeq:NP_565253.1 UniGene:At.21443 ProteinModelPortal:Q9ZU51
SMR:Q9ZU51 IntAct:Q9ZU51 STRING:Q9ZU51 EnsemblPlants:AT2G01150.1
GeneID:814644 KEGG:ath:AT2G01150 GeneFarm:4093 TAIR:At2g01150
eggNOG:NOG328417 InParanoid:Q9ZU51 OMA:YRYSDNA PhylomeDB:Q9ZU51
Genevestigator:Q9ZU51 GermOnline:AT2G01150 Uniprot:Q9ZU51
Length = 147
Score = 117 (46.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 478 DQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNV-CPICKSEAL 529
D CI+C + E++ LDC H +H +CL+ WL N CP+C+S L
Sbjct: 68 DNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLL 120
>UNIPROTKB|E1BCM3 [details] [associations]
symbol:RNF215 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:EAPVEGW GeneTree:ENSGT00530000063291 EMBL:DAAA02045619
IPI:IPI00710402 Ensembl:ENSBTAT00000004400 Uniprot:E1BCM3
Length = 379
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 451 EIVARQLKTRVYLSATNYINLEEPASKDQEPGS--CIICQEDYRDNEKIGTLDCDHEYHA 508
E++ R++ R+ T L A EPG+ C +C + + + + + L C HE+H
Sbjct: 292 ELLKRRVVQRLASLKTRRCRLGRAAQSPPEPGAETCAVCLDYFCNKQWLRVLPCKHEFHR 351
Query: 509 ECLKKWLFIKNVCPICKSEALATK 532
+C+ WL ++ CP+CK L +
Sbjct: 352 DCVDPWLMLQQTCPLCKFNVLGNR 375
>TAIR|locus:2103162 [details] [associations]
symbol:DAFL1 "DAF-Like gene 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
EMBL:AC011708 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:BT004771 EMBL:AK227982 IPI:IPI00541327
RefSeq:NP_187702.1 UniGene:At.27986 ProteinModelPortal:Q9SG96
SMR:Q9SG96 EnsemblPlants:AT3G10910.1 GeneID:820261
KEGG:ath:AT3G10910 TAIR:At3g10910 eggNOG:NOG288147
InParanoid:Q9SG96 OMA:EPQANAP PhylomeDB:Q9SG96
ProtClustDB:CLSN2913382 Genevestigator:Q9SG96 GermOnline:AT3G10910
Uniprot:Q9SG96
Length = 181
Score = 126 (49.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 26/88 (29%), Positives = 38/88 (43%)
Query: 443 NVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLD- 501
N N L A LK + + L D + C+IC D+ D EK+ L
Sbjct: 75 NANANLGRLAAATGLKKQALKQIP--VGLYGSGIIDMKATECLICLGDFEDGEKVRVLPK 132
Query: 502 CDHEYHAECLKKWLFIKNVCPICKSEAL 529
C+H +H C+ WL ++ CP C+ L
Sbjct: 133 CNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
>TAIR|locus:2074678 [details] [associations]
symbol:AT3G11110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC009991 EMBL:AC073395 EMBL:BT031381 IPI:IPI00524656
RefSeq:NP_187722.1 UniGene:At.53265 ProteinModelPortal:Q9SRM0
SMR:Q9SRM0 EnsemblPlants:AT3G11110.1 GeneID:820282
KEGG:ath:AT3G11110 TAIR:At3g11110 eggNOG:NOG241452
HOGENOM:HOG000238431 InParanoid:Q9SRM0 OMA:EKECCIC PhylomeDB:Q9SRM0
ProtClustDB:CLSN2684057 Genevestigator:Q9SRM0 GermOnline:AT3G11110
Uniprot:Q9SRM0
Length = 158
Score = 116 (45.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 476 SKDQEPGSCIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPICK 525
++++E C IC + + EK+ L C H YH EC+ +WL ++ CP+C+
Sbjct: 99 AEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCR 149
>UNIPROTKB|C9IY58 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00946275
ProteinModelPortal:C9IY58 SMR:C9IY58 STRING:C9IY58
Ensembl:ENST00000482083 ArrayExpress:C9IY58 Bgee:C9IY58
Uniprot:C9IY58
Length = 232
Score = 132 (51.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 114 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 170
>UNIPROTKB|C9JCY0 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00976014
ProteinModelPortal:C9JCY0 SMR:C9JCY0 STRING:C9JCY0
Ensembl:ENST00000491086 ArrayExpress:C9JCY0 Bgee:C9JCY0
Uniprot:C9JCY0
Length = 233
Score = 132 (51.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 114 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 170
>ZFIN|ZDB-GENE-101206-1 [details] [associations]
symbol:wu:fb39e10 "wu:fb39e10" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-101206-1 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:CR385081 IPI:IPI00898579
RefSeq:XP_001923015.2 UniGene:Dr.76926 Ensembl:ENSDART00000128102
GeneID:561841 KEGG:dre:561841 NextBio:20884119 Bgee:E7F6I4
Uniprot:E7F6I4
Length = 474
Score = 128 (50.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 37/110 (33%), Positives = 56/110 (50%)
Query: 421 DMRLDIEDMSYEELLALGERIGNV---NTGLSEEIVARQLKTRVYLSATNYINLEEPASK 477
D+ D + +YE LLA E+ G V NT LS+ + R L + Y T+ A K
Sbjct: 370 DLFNDSQGNNYEALLAFEEQQGAVMAKNT-LSKAEIER-LPIKTY-DPTH------SAGK 420
Query: 478 DQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
C IC +Y+ E++ L C H+YH +C+ +WL CPIC+++
Sbjct: 421 TD----CQICFSEYKAGERLRMLPCLHDYHVKCIDRWLKENATCPICRAD 466
Score = 55 (24.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 204 REVESQRSVRNRLVATGGMDPVLAHSHNHFIQGNFIGQPFQPAGWLEQPSDGGGSSWTQA 263
R ++ Q + R+ + H+HNH + +++G + P W S SS+T
Sbjct: 274 RSLQEQFDMEERIEQQQRQSSINNHNHNHVVD-SYVGLGWIPP-WASMISS---SSFTHT 328
Query: 264 PA 265
P+
Sbjct: 329 PS 330
>TAIR|locus:2050522 [details] [associations]
symbol:AT2G44330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GO:GO:0004842 EMBL:AC004521 EMBL:AY074627 EMBL:DQ086854
IPI:IPI00534529 PIR:T02388 RefSeq:NP_181961.1 UniGene:At.28780
ProteinModelPortal:O64867 SMR:O64867 EnsemblPlants:AT2G44330.1
GeneID:819040 KEGG:ath:AT2G44330 TAIR:At2g44330 eggNOG:NOG328670
HOGENOM:HOG000115003 InParanoid:O64867 OMA:QTYWCHE PhylomeDB:O64867
ProtClustDB:CLSN2912974 ArrayExpress:O64867 Genevestigator:O64867
Uniprot:O64867
Length = 180
Score = 125 (49.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 475 ASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
AS D C IC+ED+ E L C+H YH +C+ WL N CP+C+ E
Sbjct: 87 ASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVE 139
>TAIR|locus:2200610 [details] [associations]
symbol:AT1G26800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC006535
EMBL:AF361638 EMBL:AY052705 EMBL:AY055097 IPI:IPI00539847
RefSeq:NP_564263.1 UniGene:At.15652 ProteinModelPortal:Q9LQX2
SMR:Q9LQX2 STRING:Q9LQX2 EnsemblPlants:AT1G26800.1 GeneID:839223
KEGG:ath:AT1G26800 TAIR:At1g26800 InParanoid:Q9LQX2 OMA:IDAMPIV
PhylomeDB:Q9LQX2 ProtClustDB:CLSN2682926 Genevestigator:Q9LQX2
Uniprot:Q9LQX2
Length = 204
Score = 129 (50.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 482 GSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
G C+IC E+++ E + + C H +H C++KWL CP+C+ E
Sbjct: 111 GECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYE 156
>TAIR|locus:2195871 [details] [associations]
symbol:AT1G51930 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT015124 EMBL:BT015636
IPI:IPI00533509 RefSeq:NP_175605.1 UniGene:At.64866
ProteinModelPortal:Q6AWX4 SMR:Q6AWX4 EnsemblPlants:AT1G51930.1
GeneID:841621 KEGG:ath:AT1G51930 TAIR:At1g51930 eggNOG:NOG294426
HOGENOM:HOG000141530 InParanoid:Q6AWX4 OMA:EEYEDDH PhylomeDB:Q6AWX4
ProtClustDB:CLSN2914693 Genevestigator:Q6AWX4 Uniprot:Q6AWX4
Length = 132
Score = 115 (45.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 472 EEPASKDQEPGS---CIICQEDYRDNEKIGTL-DCDHEYHAECLKKWLFIKNVCPICK 525
EE +++E G C IC E+Y D+ +I L +C H +H C+ WL K CP C+
Sbjct: 65 EEEGGREEEGGGKRFCPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCR 122
>MGI|MGI:1918923 [details] [associations]
symbol:Rnf215 "ring finger protein 215" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 MGI:MGI:1918923 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 eggNOG:NOG260672 EMBL:AL807825 CTD:200312
HOGENOM:HOG000154164 HOVERGEN:HBG080631 OMA:EAPVEGW EMBL:AK002414
EMBL:BC103627 EMBL:BC115907 EMBL:BC115908 IPI:IPI00121433
RefSeq:NP_082135.2 UniGene:Mm.240586 ProteinModelPortal:Q5SPX3
SMR:Q5SPX3 PaxDb:Q5SPX3 PRIDE:Q5SPX3 Ensembl:ENSMUST00000003677
Ensembl:ENSMUST00000124670 Ensembl:ENSMUST00000145705 GeneID:71673
KEGG:mmu:71673 UCSC:uc007hui.1 GeneTree:ENSGT00530000063291
InParanoid:Q5SPX3 OrthoDB:EOG4D7Z6X NextBio:334197 Bgee:Q5SPX3
CleanEx:MM_RNF215 Genevestigator:Q5SPX3 Uniprot:Q5SPX3
Length = 379
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 447 GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS--CIICQEDYRDNEKIGTLDCDH 504
G E++ R++ R+ T L A EPG+ C +C + + + + + L C H
Sbjct: 288 GGQEDLFKRRVVRRLASLKTRRCRLSRAAHSLPEPGTETCAVCLDYFCNKQWLRVLPCKH 347
Query: 505 EYHAECLKKWLFIKNVCPICKSEAL 529
E+H +C+ WL ++ CP+CK L
Sbjct: 348 EFHRDCVDPWLMLQQTCPLCKFNVL 372
>TAIR|locus:2125364 [details] [associations]
symbol:AT4G35840 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL031986 EMBL:AL161588 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009535 EMBL:AJ400897 EMBL:AK118022
EMBL:BT006221 IPI:IPI00518433 PIR:T04694 RefSeq:NP_195309.2
UniGene:At.31379 ProteinModelPortal:Q8GT75 SMR:Q8GT75
DIP:DIP-40179N IntAct:Q8GT75 PaxDb:Q8GT75 PRIDE:Q8GT75
EnsemblPlants:AT4G35840.1 GeneID:829738 KEGG:ath:AT4G35840
GeneFarm:2883 TAIR:At4g35840 eggNOG:NOG260090 HOGENOM:HOG000242081
InParanoid:Q8GT75 OMA:FIDNNDL PhylomeDB:Q8GT75
ProtClustDB:CLSN2686667 Genevestigator:Q8GT75 GermOnline:AT4G35840
Uniprot:Q8GT75
Length = 236
Score = 131 (51.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 30/101 (29%), Positives = 55/101 (54%)
Query: 428 DMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIIC 487
D ++EEL ++ + G+ GL+ ++V + K ++ T NL+ +KD SC +C
Sbjct: 145 DSTFEELSSIFDTGGS--KGLTGDLVDKIPKIKI----TGKNNLDASGNKD----SCSVC 194
Query: 488 QEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPICKSE 527
+D++ E + +L C H +H C+ WLF CP+C+ +
Sbjct: 195 LQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRD 235
>TAIR|locus:2195077 [details] [associations]
symbol:AT1G12760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AC025417 eggNOG:NOG277561 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059089 EMBL:AY136370 EMBL:BT000279
IPI:IPI00516637 RefSeq:NP_172736.2 UniGene:At.43884
ProteinModelPortal:Q9LN71 SMR:Q9LN71 PaxDb:Q9LN71 PRIDE:Q9LN71
EnsemblPlants:AT1G12760.1 GeneID:837832 KEGG:ath:AT1G12760
TAIR:At1g12760 InParanoid:Q9LN71 OMA:ESPRIYW PhylomeDB:Q9LN71
Genevestigator:Q9LN71 Uniprot:Q9LN71
Length = 408
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 479 QEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALATKS 533
QE C IC Y D ++ L C H +H C+ KWL+I CP+CK L + +
Sbjct: 348 QEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSN 402
>UNIPROTKB|B3KR12 [details] [associations]
symbol:RNF13 "cDNA FLJ33452 fis, clone BRAMY2000151, highly
similar to RING finger protein 13" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
EMBL:CH471052 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000234362 HOVERGEN:HBG063762 EMBL:AC069216 EMBL:AC117395
UniGene:Hs.12333 HGNC:HGNC:10057 ChiTaRS:RNF13 EMBL:AK090771
IPI:IPI00373832 SMR:B3KR12 STRING:B3KR12 Ensembl:ENST00000361785
UCSC:uc010hvh.3 Uniprot:B3KR12
Length = 262
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 114 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 170
>RGD|1306670 [details] [associations]
symbol:Rnf139 "ring finger protein 139" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0017148 "negative regulation of
translation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISO] [GO:0031396 "regulation of protein
ubiquitination" evidence=ISO] [GO:0060628 "regulation of ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0070613
"regulation of protein processing" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1306670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AH009105 IPI:IPI00360791 ProteinModelPortal:Q9JLC5
UCSC:RGD:1306670 InParanoid:Q9JLC5 Genevestigator:Q9JLC5
Uniprot:Q9JLC5
Length = 100
Score = 114 (45.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
C IC ++ + +I C+H +HA CL+KWL+I++ CP+C
Sbjct: 28 CXICYHEFTTSARI--TPCNHYFHALCLRKWLYIQDTCPMC 66
>TAIR|locus:2122348 [details] [associations]
symbol:AT4G09100 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005359 HOGENOM:HOG000237642 EMBL:AL161514 EMBL:DQ059117
EMBL:BT024815 IPI:IPI00531797 PIR:B85092 RefSeq:NP_192649.1
UniGene:At.54223 ProteinModelPortal:Q9M0R7 SMR:Q9M0R7
EnsemblPlants:AT4G09100.1 GeneID:826488 KEGG:ath:AT4G09100
TAIR:At4g09100 eggNOG:NOG246260 InParanoid:Q9M0R7 OMA:IGELECV
PhylomeDB:Q9M0R7 ProtClustDB:CLSN2915828 Genevestigator:Q9M0R7
GermOnline:AT4G09100 Uniprot:Q9M0R7
Length = 132
Score = 114 (45.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 409 FYEVGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNY 468
FY + +I R R+ D+ EE R GL E + + + VY A
Sbjct: 23 FYIINYYIRRCRNRAAAAGDI--EEARMSPRRPPR---GLDAEAI-KSFPSFVYTEARGI 76
Query: 469 INLEEPASKDQEPGSCIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPICKSE 527
EP + E C++C +++D+E + + C H +HA+C+ WL + CPIC+++
Sbjct: 77 ----EPGIGELE---CVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAK 129
Query: 528 AL 529
+
Sbjct: 130 VV 131
>UNIPROTKB|F1NUJ3 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 EMBL:AADN02021136
EMBL:AADN02021135 IPI:IPI00820464 Ensembl:ENSGALT00000038908
Uniprot:F1NUJ3
Length = 272
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 191 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 247
>TAIR|locus:2133877 [details] [associations]
symbol:AT4G26580 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AK227805 IPI:IPI00524845 RefSeq:NP_001190848.1
RefSeq:NP_194388.2 UniGene:At.23121 UniGene:At.67112
ProteinModelPortal:Q0WSW1 SMR:Q0WSW1 EnsemblPlants:AT4G26580.1
EnsemblPlants:AT4G26580.2 GeneID:828765 KEGG:ath:AT4G26580
eggNOG:NOG314995 OMA:RPVWPMR ProtClustDB:CLSN2690028
Genevestigator:Q0WSW1 Uniprot:Q0WSW1
Length = 335
Score = 134 (52.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 443 NVNTGLSEEIVAR-QLKTRVYLSATNYINLEEPASKDQ---EPGSCIICQEDYRDNEKIG 498
N+N G SE+ + Q+ + L + Y ++E + Q +P C IC Y++ E++
Sbjct: 248 NMNVGSSEKGASDDQISS---LPSWKYKLIDETSDSSQANNDP-ECCICLAKYKEKEEVR 303
Query: 499 TLDCDHEYHAECLKKWLFIKNVCPICKSE 527
L C H +H +C+ +WL I + CP+CK +
Sbjct: 304 KLPCSHRFHLKCVDQWLRIISCCPLCKQD 332
>RGD|1594062 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10116 "Rattus
norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005637
"nuclear inner membrane" evidence=IEA] [GO:0005765 "lysosomal
membrane" evidence=ISO;ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=ISO;ISS] [GO:0051865
"protein autoubiquitination" evidence=ISO;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1594062 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865
GO:GO:0005637 HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:BC081881
IPI:IPI00471874 RefSeq:NP_001102914.1 UniGene:Rn.17153
ProteinModelPortal:Q66HG0 GeneID:681578 KEGG:rno:681578
UCSC:RGD:1594062 NextBio:721179 Genevestigator:Q66HG0
Uniprot:Q66HG0
Length = 380
Score = 135 (52.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC E+Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 233 KGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289
>MGI|MGI:1346341 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1346341 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005829 GO:GO:0031902 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637 EMBL:CH466530
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 CTD:11342 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB EMBL:AF037205 EMBL:AF037206 EMBL:AK158046
EMBL:BC058182 IPI:IPI00119961 IPI:IPI00420831 RefSeq:NP_001106884.1
RefSeq:NP_036013.1 UniGene:Mm.274360 ProteinModelPortal:O54965
SMR:O54965 PhosphoSite:O54965 PRIDE:O54965
Ensembl:ENSMUST00000041826 GeneID:24017 KEGG:mmu:24017
eggNOG:NOG260066 InParanoid:Q6PEA8 NextBio:303955 Bgee:O54965
CleanEx:MM_RNF13 Genevestigator:O54965
GermOnline:ENSMUSG00000036503 Uniprot:O54965
Length = 381
Score = 135 (52.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC E+Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 233 KGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289
>FB|FBgn0037442 [details] [associations]
symbol:CG10277 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 EMBL:AE014297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
GeneTree:ENSGT00700000104226 KO:K15692 FlyBase:FBgn0037442
EMBL:BT133094 RefSeq:NP_001097695.1 RefSeq:NP_649653.1
RefSeq:NP_731079.1 RefSeq:NP_731080.1 UniGene:Dm.1079 SMR:Q9VI20
MINT:MINT-1017740 EnsemblMetazoa:FBtr0081720
EnsemblMetazoa:FBtr0081721 EnsemblMetazoa:FBtr0081722
EnsemblMetazoa:FBtr0113198 GeneID:40791 KEGG:dme:Dmel_CG10277
UCSC:CG10277-RA InParanoid:Q9VI20 OMA:CIREQRR GenomeRNAi:40791
NextBio:820604 Uniprot:Q9VI20
Length = 536
Score = 130 (50.8 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFI-KNVCPICKSEALATK 532
+C+IC ED+ +++K+ L C H YH C+ WL + VCPICK + TK
Sbjct: 234 TCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICKRKVF-TK 283
Score = 52 (23.4 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 345 YR--TMNISQDGSEMVPRHMGP-VPPTGFRIYRSPREGPVPEALRQRSLPHLRVLPS 398
YR T + ++ +++ P GP +P G ++Y P P PHL+ PS
Sbjct: 31 YRKATSQLIEEFNDL-PAQFGPNLPSNGLKVYVVPARRPYYGCDSLDRPPHLKYPPS 86
>TAIR|locus:2125652 [details] [associations]
symbol:AT4G32600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005886 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY074271
EMBL:AY081300 EMBL:AY096655 IPI:IPI00534397 RefSeq:NP_194986.2
UniGene:At.27844 ProteinModelPortal:Q8VY23 SMR:Q8VY23
EnsemblPlants:AT4G32600.1 GeneID:829395 KEGG:ath:AT4G32600
HOGENOM:HOG000239557 InParanoid:Q8VY23 OMA:EHIIDIP PhylomeDB:Q8VY23
ProtClustDB:CLSN2691130 Genevestigator:Q8VY23 Uniprot:Q8VY23
Length = 453
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
E C IC Y +NE++ L C H +H EC+ KWL I CP+CKSE
Sbjct: 359 EDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSE 406
>ASPGD|ASPL0000044927 [details] [associations]
symbol:AN1658 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 EMBL:BN001307 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AACD01000026
eggNOG:NOG265447 OrthoDB:EOG42NN8X RefSeq:XP_659262.1
ProteinModelPortal:Q5BCS2 EnsemblFungi:CADANIAT00008299
GeneID:2875458 KEGG:ani:AN1658.2 Uniprot:Q5BCS2
Length = 238
Score = 130 (50.8 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 461 VYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNV 520
V +SA+ + E +S C IC ED+ D++ I L CDH YHA CL W +
Sbjct: 146 VQVSAS--VEHEVASSHGDAHRECAICMEDFDDDDSIRALTCDHIYHATCLDPWFTKRQA 203
Query: 521 -CPICKS 526
CP+CK+
Sbjct: 204 RCPLCKT 210
>UNIPROTKB|A6QLE0 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 CTD:54778 eggNOG:NOG291583
HOVERGEN:HBG093884 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 HOGENOM:HOG000154152 OrthoDB:EOG4MSCXR
EMBL:DAAA02028816 EMBL:DAAA02028817 EMBL:DAAA02028818 EMBL:BC147931
IPI:IPI00867083 RefSeq:NP_001095709.1 UniGene:Bt.48619
STRING:A6QLE0 Ensembl:ENSBTAT00000018858 GeneID:540353
KEGG:bta:540353 InParanoid:A6QLE0 NextBio:20878580 Uniprot:A6QLE0
Length = 994
Score = 144 (55.7 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATN--YINLEEPASKDQEPGS---- 483
++EEL+ L ER+GNVN G S+ + R Y T + + +D E G+
Sbjct: 879 NFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDT 938
Query: 484 ---CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C IC + E + L C H +H C+ +WL CPIC+
Sbjct: 939 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 983
Score = 44 (20.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 49 ASGNTSSLDAHQHYDSAMFYGMPQYHGVHHHH 80
+S N +L H H +G H HHHH
Sbjct: 490 SSQNHHAL-GHPHTSCFQQHGHHFQHHHHHHH 520
>MGI|MGI:1934919 [details] [associations]
symbol:Rnf111 "ring finger 111" species:10090 "Mus musculus"
[GO:0000209 "protein polyubiquitination" evidence=IGI;IMP;IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IMP;IDA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process"
evidence=IMP;IDA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IMP;IDA] [GO:0032184 "SUMO polymer
binding" evidence=ISO] [GO:0043234 "protein complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0046332 "SMAD binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
MGI:MGI:1934919 Prosite:PS00518 GO:GO:0005737 GO:GO:0045893
GO:GO:0043234 GO:GO:0005654 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0007389 GO:GO:0000209
GO:GO:0032184 GO:GO:0030579 CTD:54778 eggNOG:NOG291583
HOVERGEN:HBG093884 KO:K10635 OMA:CDDSQKQ EMBL:AF330197
EMBL:AK048110 EMBL:AK036351 EMBL:AK137148 EMBL:BC054842
EMBL:BC069835 IPI:IPI00117820 IPI:IPI00830944 RefSeq:NP_291082.1
UniGene:Mm.29783 ProteinModelPortal:Q99ML9 SMR:Q99ML9 IntAct:Q99ML9
MINT:MINT-1899537 STRING:Q99ML9 PhosphoSite:Q99ML9 PRIDE:Q99ML9
Ensembl:ENSMUST00000034739 Ensembl:ENSMUST00000113595 GeneID:93836
KEGG:mmu:93836 UCSC:uc009qoa.1 UCSC:uc009qoe.1
GeneTree:ENSGT00670000097625 HOGENOM:HOG000154152 InParanoid:Q99ML9
OrthoDB:EOG4MSCXR NextBio:351685 Bgee:Q99ML9 CleanEx:MM_RNF111
Genevestigator:Q99ML9 Uniprot:Q99ML9
Length = 989
Score = 144 (55.7 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATN--YINLEEPASKDQEPGS---- 483
++EEL+ L ER+GNVN G S+ + R Y T + + +D E G+
Sbjct: 874 NFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDT 933
Query: 484 ---CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C IC + E + L C H +H C+ +WL CPIC+
Sbjct: 934 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 978
Score = 46 (21.3 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 58 AHQHYDSAMFYGMPQYHGVHHHH 80
AH H +G H HHHH
Sbjct: 496 AHPHSSCFQQHGHHFQHHHHHHH 518
Score = 44 (20.5 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 19/76 (25%), Positives = 32/76 (42%)
Query: 173 PLHPRHPDGVTPMDA----ACFSLPQYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAH 228
P +P P G D A F+ PQ N ++ +S+ + + + L H
Sbjct: 284 PSNPAAPSGSIDEDVVVIEASFT-PQVTANEEINVTSTDSEVEIVT-VGESYRSRSTLGH 341
Query: 229 SHNHFIQGN--FIGQP 242
S +H+ QG+ G+P
Sbjct: 342 SRSHWSQGSSSHTGRP 357
Score = 40 (19.1 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 25 LLPEPCVVLGGVTSFPQPMQTIVRASGNTSS 55
L P+P LG SFP ++ I GN S
Sbjct: 37 LHPQP---LGATKSFPAEVEMINSKVGNEFS 64
>TAIR|locus:505006414 [details] [associations]
symbol:AT4G00305 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL161471
IPI:IPI00543955 RefSeq:NP_567167.1 UniGene:At.54058
ProteinModelPortal:Q3EAE6 SMR:Q3EAE6 PaxDb:Q3EAE6 PRIDE:Q3EAE6
EnsemblPlants:AT4G00305.1 GeneID:827340 KEGG:ath:AT4G00305
TAIR:At4g00305 eggNOG:NOG278038 InParanoid:Q3EAE6 OMA:ESCRICQ
PhylomeDB:Q3EAE6 ProtClustDB:CLSN2917462 Genevestigator:Q3EAE6
Uniprot:Q3EAE6
Length = 126
Score = 113 (44.8 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 463 LSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTL-DCDHEYHAECLKKWLFI-KNV 520
L AT + E+ +S+ P SC ICQ+++ +++ L +C H YH C+ +W+ K
Sbjct: 53 LPATKF---EDISSRVNPPESCRICQDEFDGGDEVRCLRNCVHVYHKTCIDRWIQDDKMT 109
Query: 521 CPICKS 526
CP+C++
Sbjct: 110 CPLCRT 115
>TAIR|locus:2053863 [details] [associations]
symbol:RHA3A "RING-H2 finger A3A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007584
HOGENOM:HOG000237642 EMBL:AF078824 EMBL:AF370239 EMBL:AY062961
IPI:IPI00548768 PIR:T51844 RefSeq:NP_179337.1 UniGene:At.25384
ProteinModelPortal:O22755 SMR:O22755 STRING:O22755
EnsemblPlants:AT2G17450.1 GeneID:816251 KEGG:ath:AT2G17450
GeneFarm:4094 TAIR:At2g17450 eggNOG:NOG257865 InParanoid:O22755
OMA:DSTECAI PhylomeDB:O22755 ProtClustDB:CLSN2683892
Genevestigator:O22755 GermOnline:AT2G17450 Uniprot:O22755
Length = 185
Score = 124 (48.7 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 475 ASKDQEPGSCIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPICK 525
A+++ + C IC D+ D E+I L C H +H EC+ KWL ++ CP C+
Sbjct: 93 AAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
>FB|FBgn0052850 [details] [associations]
symbol:CG32850 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AE014135 eggNOG:NOG265447 KO:K11980
GeneTree:ENSGT00700000104290 EMBL:AY094874 RefSeq:NP_726563.1
UniGene:Dm.12791 SMR:Q8SX35 MINT:MINT-1614135 STRING:Q8SX35
EnsemblMetazoa:FBtr0089123 GeneID:318246 KEGG:dme:Dmel_CG32850
UCSC:CG32850-RA FlyBase:FBgn0052850 InParanoid:Q8SX35 OMA:NCIDDWL
OrthoDB:EOG4QV9V7 GenomeRNAi:318246 NextBio:845314 Uniprot:Q8SX35
Length = 147
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/80 (28%), Positives = 35/80 (43%)
Query: 445 NTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDH 504
N LS+E Q+K + Y+ + ++ C+IC ++ NE + L C H
Sbjct: 56 NRQLSDE---NQVKIAKRIGLMQYLPIGTYDGSSKKARECVICMAEFCVNEAVRYLPCMH 112
Query: 505 EYHAECLKKWLFIKNVCPIC 524
YH C+ WL CP C
Sbjct: 113 IYHVNCIDDWLLRSLTCPSC 132
>TAIR|locus:4515102735 [details] [associations]
symbol:AT1G67856 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC012563 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00891607 RefSeq:NP_001117565.1 UniGene:At.66117
UniGene:At.70659 ProteinModelPortal:B3H543 SMR:B3H543
EnsemblPlants:AT1G67856.1 GeneID:6240476 KEGG:ath:AT1G67856
TAIR:At1g67856 eggNOG:NOG324400 HOGENOM:HOG000242879 KO:K16285
OMA:VSELSCK PhylomeDB:B3H543 ProtClustDB:CLSN2681281
Genevestigator:B3H543 Uniprot:B3H543
Length = 133
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 458 KTRVYLSATNYINL-EEPASKDQ-EPGSCIICQEDYRDNEKIGTL-DCDHEYHAECLKKW 514
K R +S T++ +L E S+++ E C +C +++ E++ L C H +H+ CL KW
Sbjct: 59 KRRRRISITHFESLCENRGSRNEREAMDCCVCLCGFKEEEEVSELVSCKHYFHSACLDKW 118
Query: 515 LFIKN--VCPICKS 526
F N CP+C+S
Sbjct: 119 -FGNNHTTCPLCRS 131
>TAIR|locus:2139044 [details] [associations]
symbol:AT4G12190 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00546160 RefSeq:NP_192956.1 UniGene:At.65368
ProteinModelPortal:F4JQK3 SMR:F4JQK3 DNASU:826827
EnsemblPlants:AT4G12190.1 GeneID:826827 KEGG:ath:AT4G12190
OMA:PRDITRM Uniprot:F4JQK3
Length = 71
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/62 (38%), Positives = 30/62 (48%)
Query: 469 INLEEPASKDQEPGSCIICQEDYRDNEK---IGTLDCDHEYHAECLKKWLFIKNVCPICK 525
I EE S E C IC E K I + C H +H CL +WL KN CP+C+
Sbjct: 7 IKTEELKSLKMETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCR 66
Query: 526 SE 527
+E
Sbjct: 67 TE 68
>WB|WBGene00022264 [details] [associations]
symbol:sdz-34 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000064787 eggNOG:NOG269169 HOGENOM:HOG000114660
EMBL:FO080919 PIR:T33794 RefSeq:NP_503852.1 UniGene:Cel.28440
ProteinModelPortal:Q9TXW4 SMR:Q9TXW4 EnsemblMetazoa:Y73C8C.7
GeneID:190662 KEGG:cel:CELE_Y73C8C.7 UCSC:Y73C8C.7 CTD:190662
WormBase:Y73C8C.7 InParanoid:Q9TXW4 OMA:FTIANTH NextBio:946546
Uniprot:Q9TXW4
Length = 574
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 447 GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRD-NEKIGTLDCDHE 505
G ++E K + L + EP + + + C++C ED ++ +E + LDC +
Sbjct: 483 GYTKEAYEETFKEKAPLICAQLLKTPEPPN-ELDDNECLVCLEDMKEEHETLKCLDCKRK 541
Query: 506 YHAECLKKWLFIKNVCPICKSEAL 529
YH C +KW +K +CP C + L
Sbjct: 542 YHTGCAQKWFKVKRICPTCDAGLL 565
>TAIR|locus:2161740 [details] [associations]
symbol:AT5G55970 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
ProtClustDB:CLSN2690028 EMBL:AY085253 IPI:IPI00546676
RefSeq:NP_568834.1 RefSeq:NP_851197.1 UniGene:At.7462
ProteinModelPortal:Q8LES9 SMR:Q8LES9 PRIDE:Q8LES9
EnsemblPlants:AT5G55970.1 EnsemblPlants:AT5G55970.2 GeneID:835695
KEGG:ath:AT5G55970 TAIR:At5g55970 eggNOG:NOG241449
HOGENOM:HOG000238199 InParanoid:Q8LES9 OMA:CCICLAQ PhylomeDB:Q8LES9
Genevestigator:Q8LES9 Uniprot:Q8LES9
Length = 343
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 473 EPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
+ A+ +P C IC Y+D E++ L C H++H++C+ +WL I + CP+CK +
Sbjct: 287 DSATVTDDP-ECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQD 340
>UNIPROTKB|Q6ZNA4 [details] [associations]
symbol:RNF111 "E3 ubiquitin-protein ligase Arkadia"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0032184
"SUMO polymer binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Reactome:REACT_111102 Reactome:REACT_6900
Pathway_Interaction_DB:tgfbrpathway GO:GO:0043234 GO:GO:0005654
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0007179 GO:GO:0030511 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0004842 GO:GO:0007389 GO:GO:0000209
EMBL:CH471082 GO:GO:0006367 GO:GO:0032184 GO:GO:0030579
EMBL:AC092757 EMBL:AK095327 EMBL:AK131304 EMBL:AK131488
EMBL:AL157474 EMBL:BX538130 EMBL:BX647259 EMBL:AC025918
EMBL:AC090515 EMBL:BC010369 EMBL:BC020984 EMBL:BC060862
IPI:IPI00418593 IPI:IPI00798384 IPI:IPI00829658 PIR:T46904
RefSeq:NP_001257457.1 RefSeq:NP_001257458.1 RefSeq:NP_001257459.1
RefSeq:NP_060080.6 UniGene:Hs.404423 UniGene:Hs.603489
UniGene:Hs.741727 PDB:2KIZ PDBsum:2KIZ ProteinModelPortal:Q6ZNA4
SMR:Q6ZNA4 IntAct:Q6ZNA4 MINT:MINT-1187466 STRING:Q6ZNA4
PhosphoSite:Q6ZNA4 DMDM:308153555 PRIDE:Q6ZNA4
Ensembl:ENST00000348370 Ensembl:ENST00000434298
Ensembl:ENST00000557998 Ensembl:ENST00000559209
Ensembl:ENST00000561186 GeneID:54778 KEGG:hsa:54778 UCSC:uc002afs.3
UCSC:uc002aft.3 UCSC:uc002afv.3 CTD:54778 GeneCards:GC15P059160
HGNC:HGNC:17384 HPA:HPA038576 HPA:HPA038577 MIM:605840
neXtProt:NX_Q6ZNA4 PharmGKB:PA134868772 eggNOG:NOG291583
HOVERGEN:HBG093884 InParanoid:Q6ZNA4 KO:K10635 OMA:CDDSQKQ
GenomeRNAi:54778 NextBio:57437 Bgee:Q6ZNA4 CleanEx:HS_RNF111
Genevestigator:Q6ZNA4 Uniprot:Q6ZNA4
Length = 994
Score = 144 (55.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATN--YINLEEPASKDQEPGS---- 483
++EEL+ L ER+GNVN G S+ + R Y T + + +D E G+
Sbjct: 879 NFEELIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDT 938
Query: 484 ---CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C IC + E + L C H +H C+ +WL CPIC+
Sbjct: 939 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 983
Score = 44 (20.5 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 49 ASGNTSSLDAHQHYDSAMFYGMPQYHGVHHHH 80
+S N +L H H +G H HHHH
Sbjct: 490 SSQNHHAL-GHPHTSCFQQHGHHFQHHHHHHH 520
Score = 41 (19.5 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 175 HPRHPDGVTPMDAACF---SLPQYRGNGTPSIREVESQRSVRNRLVATGGMDPVLAHSHN 231
+P P G D S PQ N ++ +S+ + + + L HS +
Sbjct: 288 NPAVPSGSIDEDVVVIEASSTPQVTANEEINVTSTDSEVEIVT-VGESYRSRSTLGHSRS 346
Query: 232 HFIQGN--FIGQPFQP 245
H+ QG+ +P +P
Sbjct: 347 HWSQGSSSHASRPQEP 362
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 262 QAPAIPYMHGSNVSGA-PMDSGNMVVQR-----YPETAGNRNSSTFLQPP-VNIQHLSFP 314
QA A P+ HG+ P + V+ + + + + S PP ++ + P
Sbjct: 660 QASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQISSHATSHPVAPPPPTHLASTAAP 719
Query: 315 ---HPPPPFQGIRNH 326
H PP Q I +H
Sbjct: 720 IPQHLPPTHQPISHH 734
>TAIR|locus:2034939 [details] [associations]
symbol:AT1G18760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
InterPro:IPR003903 PROSITE:PS50330 EMBL:AC011809
HOGENOM:HOG000152571 EMBL:DQ086850 IPI:IPI00538681 PIR:E86321
RefSeq:NP_173311.1 UniGene:At.64831 ProteinModelPortal:Q9M9U7
SMR:Q9M9U7 PRIDE:Q9M9U7 EnsemblPlants:AT1G18760.1 GeneID:838458
KEGG:ath:AT1G18760 TAIR:At1g18760 eggNOG:NOG283378
InParanoid:Q9M9U7 PhylomeDB:Q9M9U7 Genevestigator:Q9M9U7
Uniprot:Q9M9U7
Length = 224
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/131 (25%), Positives = 59/131 (45%)
Query: 397 PSDG--VALLEIPDFYEVGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVA 454
P D V+LL P+ + + + + ED E + A E N++ + ++V
Sbjct: 98 PGDDLLVSLLIFPNDEPIEEEYEIEEEDLSEEEDQIEEAVRASLEETNNISLRPANKLVV 157
Query: 455 RQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKW 514
L ++Y T+ S ++ C IC E++ D K+ TL C HE+ EC+ W
Sbjct: 158 NSLARKIYKKTTS--------STER----CTICLEEFNDGTKVMTLPCGHEFDDECVLTW 205
Query: 515 LFIKNVCPICK 525
+ CP+C+
Sbjct: 206 FETNHDCPLCR 216
>UNIPROTKB|F1NS28 [details] [associations]
symbol:RNF128 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005783 GO:GO:0005794 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 OMA:HEASSMA
EMBL:AADN02013647 EMBL:AADN02013648 IPI:IPI00575054
Ensembl:ENSGALT00000032298 Uniprot:F1NS28
Length = 418
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/79 (35%), Positives = 38/79 (48%)
Query: 455 RQLKTRVYLSATNYINLEEPASKDQEPG----SCIICQEDYRDNEKIGTLDCDHEYHAEC 510
RQLK A + L D+E G SC +C E Y+ NE + L C+H +H C
Sbjct: 240 RQLKAEAK-KAIGQLQLRTLKQGDKETGPDGDSCAVCIELYKPNEVVRILTCNHLFHKNC 298
Query: 511 LKKWLFIKNVCPICKSEAL 529
+ WL CP+CK + L
Sbjct: 299 IDPWLLEHRTCPMCKCDIL 317
>UNIPROTKB|Q9LRB7 [details] [associations]
symbol:EL5.1 "E3 ubiquitin-protein ligase EL5"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0048364 "root development"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005886
GO:GO:0051301 GO:GO:0046872 GO:GO:0008270 GO:GO:0048364
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 eggNOG:NOG265447
EMBL:AB045120 EMBL:AP005883 EMBL:AK243670 RefSeq:NP_001047149.1
UniGene:Os.3710 PDB:1IYM PDBsum:1IYM ProteinModelPortal:Q9LRB7
SMR:Q9LRB7 STRING:Q9LRB7 EnsemblPlants:LOC_Os02g35329.1
GeneID:4329685 KEGG:dosa:Os02t0559800-01 KEGG:dosa:Os02t0560200-01
KEGG:dosa:Os02t0560600-01 KEGG:dosa:Os02t0561000-01
KEGG:dosa:Os02t0561400-01 KEGG:dosa:Os02t0561800-01
KEGG:dosa:Os02t0561900-00 KEGG:dosa:Os11t0649801-00
KEGG:osa:4329685 Gramene:Q9LRB7 HOGENOM:HOG000243710 KO:K16286
OMA:LWSFGRQ ProtClustDB:CLSN2692836 EvolutionaryTrace:Q9LRB7
Uniprot:Q9LRB7
Length = 325
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 442 GNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLD 501
G G+ E++ R L VY +T +E +D + C +C + D E+ L
Sbjct: 93 GGTGGGVDPEVL-RSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLP 151
Query: 502 -CDHEYHAECLKKWLFIKNVCPICK 525
C H +HAEC+ WL + CP+C+
Sbjct: 152 RCGHGFHAECVDMWLGSHSTCPLCR 176
>UNIPROTKB|F1NA38 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 OMA:MGSNDID
IPI:IPI00587571 EMBL:AADN02021136 EMBL:AADN02021135
Ensembl:ENSGALT00000016951 Uniprot:F1NA38
Length = 380
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 232 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 288
>UNIPROTKB|Q0VD51 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0000139
GO:GO:0031902 GO:GO:0005765 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 EMBL:BC119833 IPI:IPI00707917
RefSeq:NP_001069610.1 UniGene:Bt.40316 ProteinModelPortal:Q0VD51
PRIDE:Q0VD51 Ensembl:ENSBTAT00000014803 GeneID:539035
KEGG:bta:539035 CTD:11342 InParanoid:Q0VD51 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB NextBio:20877737 Uniprot:Q0VD51
Length = 380
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289
>UNIPROTKB|Q90972 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:X95455 EMBL:AY787020 IPI:IPI00587571
RefSeq:NP_990686.1 UniGene:Gga.3523 ProteinModelPortal:Q90972
STRING:Q90972 PRIDE:Q90972 GeneID:396303 KEGG:gga:396303
InParanoid:Q90972 NextBio:20816353 Uniprot:Q90972
Length = 381
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289
>UNIPROTKB|E2QZ01 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 Ensembl:ENSCAFT00000013305 Uniprot:E2QZ01
Length = 381
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289
>UNIPROTKB|F6XCX3 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
CTD:11342 KO:K15692 OMA:MGSNDID Ensembl:ENSCAFT00000013305
EMBL:AAEX03013674 EMBL:AAEX03013676 EMBL:AAEX03013675
RefSeq:XP_534303.1 ProteinModelPortal:F6XCX3 GeneID:477109
KEGG:cfa:477109 Uniprot:F6XCX3
Length = 381
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289
>UNIPROTKB|O43567 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0031902 "late endosome membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 EMBL:CH471052 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0051865 GO:GO:0005637 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 OMA:MGSNDID OrthoDB:EOG41NTMB EMBL:AF037204
EMBL:AF070558 EMBL:AK313304 EMBL:AK090638 EMBL:CR456804
EMBL:AC069216 EMBL:AC117395 EMBL:BC009803 EMBL:BC009781
IPI:IPI00151036 RefSeq:NP_009213.1 RefSeq:NP_899237.1
UniGene:Hs.12333 ProteinModelPortal:O43567 SMR:O43567 IntAct:O43567
STRING:O43567 PhosphoSite:O43567 PRIDE:O43567 DNASU:11342
Ensembl:ENST00000344229 Ensembl:ENST00000392894 GeneID:11342
KEGG:hsa:11342 UCSC:uc003exn.4 GeneCards:GC03P149531
HGNC:HGNC:10057 HPA:HPA008709 MIM:609247 neXtProt:NX_O43567
PharmGKB:PA34422 InParanoid:O43567 ChiTaRS:RNF13 GenomeRNAi:11342
NextBio:43096 ArrayExpress:O43567 Bgee:O43567 CleanEx:HS_RNF13
Genevestigator:O43567 GermOnline:ENSG00000082996 Uniprot:O43567
Length = 381
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289
>UNIPROTKB|I3LG86 [details] [associations]
symbol:RNF13 "Ring finger protein 13" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0031902
GO:GO:0005765 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0051865
GeneTree:ENSGT00700000104226 CTD:11342 KO:K15692 OMA:MGSNDID
EMBL:FP312790 EMBL:CU915458 EMBL:GACC01000242 RefSeq:XP_003358656.2
Ensembl:ENSSSCT00000022374 GeneID:100621829 KEGG:ssc:100621829
Uniprot:I3LG86
Length = 381
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289
>UNIPROTKB|Q5RCV8 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9601 "Pongo abelii" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005765 "lysosomal membrane"
evidence=ISS] [GO:0031902 "late endosome membrane" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0000139 GO:GO:0031902 GO:GO:0005765 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:CR858160
RefSeq:NP_001125196.1 UniGene:Pab.18281 ProteinModelPortal:Q5RCV8
SMR:Q5RCV8 PRIDE:Q5RCV8 GeneID:100172087 KEGG:pon:100172087
Uniprot:Q5RCV8
Length = 381
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICKSEALATK 532
K E C IC ++Y D +K+ L C H YH +C+ WL K CP+CK + + ++
Sbjct: 233 KGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQ 289
>UNIPROTKB|F1ND85 [details] [associations]
symbol:RNF215 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 EMBL:AADN02050497 EMBL:AADN02050498
IPI:IPI00915203 Ensembl:ENSGALT00000038167 Uniprot:F1ND85
Length = 233
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 447 GLSE---EIVARQ-LKTRVYLSATNYINLEEPA-SKDQEPGSCIICQEDYRDNEKIGTLD 501
GLSE E+ +Q ++ R+ T N S+ E SC +C + + ++ + L
Sbjct: 139 GLSERDAELDLKQHIRRRLLALKTRRYNPGRALRSRACEIDSCAVCLDQFSKSQWLRVLP 198
Query: 502 CDHEYHAECLKKWLFIKNVCPICKSEAL 529
C HE+H +C+ WL ++ CP+CK L
Sbjct: 199 CSHEFHRDCVDPWLLLQQTCPLCKHNIL 226
>TAIR|locus:505006415 [details] [associations]
symbol:RHB1A "RING-H2 finger B1A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000005881
EMBL:BT024583 EMBL:AK228408 IPI:IPI00549137 RefSeq:NP_567171.1
RefSeq:NP_974488.1 UniGene:At.10854 ProteinModelPortal:Q2HIJ8
SMR:Q2HIJ8 PRIDE:Q2HIJ8 EnsemblPlants:AT4G00335.1
EnsemblPlants:AT4G00335.2 GeneID:828093 KEGG:ath:AT4G00335
TAIR:At4g00335 eggNOG:NOG324180 InParanoid:Q2HIJ8 OMA:WIERSDR
PhylomeDB:Q2HIJ8 ProtClustDB:CLSN2697998 Genevestigator:Q2HIJ8
Uniprot:Q2HIJ8
Length = 190
Score = 123 (48.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 478 DQEPGSCIICQEDYR-DNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
D+E C IC EDY +N ++ T C+HE+H CL +W+ + CPIC E +
Sbjct: 133 DEEEDCCPICFEDYDVENPRL-TTKCEHEFHLSCLLEWIERSDRCPICDKEVV 184
>TAIR|locus:2143176 [details] [associations]
symbol:AT5G15820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AL391144 HOGENOM:HOG000152578 ProtClustDB:CLSN2685198
EMBL:AY057666 EMBL:AY113016 IPI:IPI00536796 PIR:T51411
RefSeq:NP_197086.1 UniGene:At.26239 ProteinModelPortal:Q9LFU4
SMR:Q9LFU4 EnsemblPlants:AT5G15820.1 GeneID:831439
KEGG:ath:AT5G15820 TAIR:At5g15820 eggNOG:NOG241089
InParanoid:Q9LFU4 OMA:IVCAICK PhylomeDB:Q9LFU4
Genevestigator:Q9LFU4 Uniprot:Q9LFU4
Length = 348
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
C IC+++ EK+ L C H YH EC+ WL I+N CP+C+ E
Sbjct: 291 CAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHE 334
>TAIR|locus:2158500 [details] [associations]
symbol:AT5G45290 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00891318
RefSeq:NP_001119377.1 UniGene:At.28443 ProteinModelPortal:F4KD57
SMR:F4KD57 EnsemblPlants:AT5G45290.2 GeneID:834565
KEGG:ath:AT5G45290 OMA:VEYEEAD Uniprot:F4KD57
Length = 546
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 476 SKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWL--FIKNVCPICKSE 527
S+ ++P C IC +Y + + I TL C HE+H C+ KWL VCP+C+ +
Sbjct: 482 SQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGD 535
>TAIR|locus:2074567 [details] [associations]
symbol:AT3G02340 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AC068900 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:BT006207
EMBL:AK227808 IPI:IPI00516786 RefSeq:NP_186883.1 UniGene:At.41149
ProteinModelPortal:Q9FWA5 SMR:Q9FWA5 PaxDb:Q9FWA5
EnsemblPlants:AT3G02340.1 GeneID:821090 KEGG:ath:AT3G02340
TAIR:At3g02340 eggNOG:NOG297375 HOGENOM:HOG000152578
InParanoid:Q9FWA5 OMA:NAINWTA PhylomeDB:Q9FWA5
ProtClustDB:CLSN2685198 Genevestigator:Q9FWA5 Uniprot:Q9FWA5
Length = 409
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 473 EPASKDQEPGS--CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
E A ++ + G+ C +C+++ EK+ L C H YH EC+ WL I+N CP+C+ E
Sbjct: 322 ELAVEELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYE 378
>TAIR|locus:1009023242 [details] [associations]
symbol:AT3G60966 "AT3G60966" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:DQ487553 IPI:IPI00656861
RefSeq:NP_001030907.1 UniGene:At.70726 UniGene:At.73258
ProteinModelPortal:Q1G3N1 SMR:Q1G3N1 EnsemblPlants:AT3G60966.1
GeneID:3769752 KEGG:ath:AT3G60966 TAIR:At3g60966 OMA:CEYITVS
PhylomeDB:Q1G3N1 Genevestigator:Q2V3M4 Uniprot:Q1G3N1
Length = 139
Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 478 DQEPGSCIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPICKSE 527
D P C +C ++ + EK+ L C H +HA+C+ WL + CP+C+++
Sbjct: 56 DSSPPFCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQ 106
>RGD|1310738 [details] [associations]
symbol:Rnf215 "ring finger protein 215" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1310738 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:CH473963 CTD:200312 OMA:EAPVEGW
GeneTree:ENSGT00530000063291 OrthoDB:EOG4D7Z6X IPI:IPI00212584
RefSeq:NP_001100704.1 UniGene:Rn.41695 Ensembl:ENSRNOT00000006827
GeneID:305478 KEGG:rno:305478 UCSC:RGD:1310738 NextBio:654678
Uniprot:D3ZNU0
Length = 379
Score = 136 (52.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 447 GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS--CIICQEDYRDNEKIGTLDCDH 504
G E++ R++ R+ T L A EPG+ C +C + + + + + L C H
Sbjct: 288 GGQEDLFKRRVVRRLASLKTRRCRLSRAAHSLPEPGAETCAVCLDYFCNKQWLRVLPCKH 347
Query: 505 EYHAECLKKWLFIKNVCPICKSEAL 529
E+H +C+ WL ++ CP+CK L
Sbjct: 348 EFHRDCVDPWLMLQQTCPLCKFNVL 372
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/85 (27%), Positives = 32/85 (37%)
Query: 362 MGPVPPTGFRIYRSPREGPVPEALRQRSLPHLRV---LPSDGVALLEIPDFYEVGNFIDR 418
MGP R SP P P + LP L + L G A G
Sbjct: 1 MGPADRPALRSPSSPPPPPSPPSPLLLLLPLLPLWLGLMGPGAAADGSEPEARAGR--GG 58
Query: 419 HRDMRLDIEDMSYEELLALGERIGN 443
R +R+D++ + L+ G RIG+
Sbjct: 59 ARAVRVDVKLPRQDALVLEGVRIGS 83
>TAIR|locus:2177876 [details] [associations]
symbol:AT5G41440 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:KOG0800 EMBL:AB006707
HOGENOM:HOG000141530 IPI:IPI00532498 RefSeq:NP_198959.1
UniGene:At.65617 ProteinModelPortal:Q9FN57 SMR:Q9FN57
EnsemblPlants:AT5G41440.1 GeneID:834145 KEGG:ath:AT5G41440
TAIR:At5g41440 InParanoid:Q9FN57 PhylomeDB:Q9FN57
Genevestigator:Q9FN57 Uniprot:Q9FN57
Length = 124
Score = 93 (37.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 469 INLEEPASKDQEPGSCIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPICK 525
I +E+ D+ G C IC E+++ ++ + C H +H C+ W+ CPIC+
Sbjct: 65 IKVEDVEEGDE--GCCSICLEEFKIGHELMCIKKCRHVFHRFCMLSWIDANRNCPICR 120
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 314 PHPPPPFQGI 323
P PPPP Q I
Sbjct: 39 PPPPPPQQDI 48
>UNIPROTKB|E1BQX5 [details] [associations]
symbol:E1BQX5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005109 "frizzled binding" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0038018 "Wnt receptor
catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0072089 "stem cell proliferation"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0005887 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0030178
GeneTree:ENSGT00530000063291 EMBL:AADN02026094 IPI:IPI00587362
Ensembl:ENSGALT00000001524 OMA:YDPFVYC Uniprot:E1BQX5
Length = 716
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 456 QLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWL 515
QL TR Y + + + AS C IC E++ + +++ + C HE+H EC+ WL
Sbjct: 236 QLATRRYQARCRQASWWDSASSCSSAPVCAICLEEFTEGQELRIISCSHEFHRECVDPWL 295
Query: 516 FIKNVCPICKSEALATKS 533
+ CP+C LA S
Sbjct: 296 QQHHTCPLCMFNILARDS 313
>WB|WBGene00021842 [details] [associations]
symbol:Y54E10BR.3 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 eggNOG:NOG235630 KO:K11982
EMBL:FO081636 RefSeq:NP_491091.1 ProteinModelPortal:Q9N3D1
SMR:Q9N3D1 STRING:Q9N3D1 PaxDb:Q9N3D1 EnsemblMetazoa:Y54E10BR.3
GeneID:171875 KEGG:cel:CELE_Y54E10BR.3 UCSC:Y54E10BR.3 CTD:171875
WormBase:Y54E10BR.3 HOGENOM:HOG000017337 InParanoid:Q9N3D1
OMA:FHRPCIE NextBio:873059 Uniprot:Q9N3D1
Length = 304
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 468 YINLEEPASKDQEPGS-CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKS 526
Y+ +++ + + G+ C C + ++ +E +G LDC+H +H C++ WL KN CP+C+
Sbjct: 221 YLPMKKVTQEHIDNGAQCTTCFDTFKLDEDVGALDCNHIFHRPCIEPWLKTKNSCPVCRQ 280
Query: 527 E 527
+
Sbjct: 281 K 281
>WB|WBGene00015194 [details] [associations]
symbol:B0432.13 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0008270 GO:GO:0040018 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:FO080203 eggNOG:NOG86944 KO:K11985
GeneTree:ENSGT00390000007696 PIR:T25457 RefSeq:NP_740965.2
ProteinModelPortal:P90990 SMR:P90990 EnsemblMetazoa:B0432.13.1
EnsemblMetazoa:B0432.13.2 EnsemblMetazoa:B0432.13.3 GeneID:173412
KEGG:cel:CELE_B0432.13 UCSC:B0432.13.2 CTD:173412 WormBase:B0432.13
HOGENOM:HOG000115372 InParanoid:P90990 OMA:RQCPSCR NextBio:879541
Uniprot:P90990
Length = 451
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 473 EPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
+P S Q GSC IC ED + N+KI + C H YH C+ +W+ K CP C+
Sbjct: 4 QPTSSLQ--GSCSICFEDLKQNDKISAIVCGHIYHHGCISQWIATKRQCPSCR 54
>TAIR|locus:4515102991 [details] [associations]
symbol:AT2G44581 "AT2G44581" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG329235
HOGENOM:HOG000015208 ProtClustDB:CLSN2681377 IPI:IPI00891754
RefSeq:NP_001118526.1 UniGene:At.73710 ProteinModelPortal:B3H6J7
SMR:B3H6J7 EnsemblPlants:AT2G44581.1 GeneID:6241397
KEGG:ath:AT2G44581 TAIR:At2g44581 OMA:ATEGEKM PhylomeDB:B3H6J7
Genevestigator:B3H6J7 Uniprot:B3H6J7
Length = 145
Score = 109 (43.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 484 CIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPICKSE 527
C IC E+ + EK+ + C H +H +C+ WL K++CP+C++E
Sbjct: 70 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAE 114
>ASPGD|ASPL0000049479 [details] [associations]
symbol:AN9421 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 EMBL:BN001307
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG282652
EMBL:AACD01000175 KO:K16281 RefSeq:XP_868803.1
ProteinModelPortal:Q5AQK9 EnsemblFungi:CADANIAT00008007
GeneID:3684013 KEGG:ani:AN9421.2 HOGENOM:HOG000156966 OMA:FRYNQRN
Uniprot:Q5AQK9
Length = 411
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 38/145 (26%), Positives = 62/145 (42%)
Query: 396 LPSDGVALLEIPD---FYEVGNFIDRHRDMRLDIEDMS--YEELLALG-ERIGNVNTGLS 449
LP +L+ PD + + + +D DM+ EE G R N + +S
Sbjct: 140 LPEGATSLVTAPDAKSHQRLNSATSQQPTKPVDDGDMAPESEEKSIKGFSRTNNASPRVS 199
Query: 450 EEIVARQLKTRVYLSATNYINLEEPASKDQEPG-SCIICQEDYRDNEKIGTLDCDHEYHA 508
+ + ++ Y + + I D PG SC IC + D++ I L C H +HA
Sbjct: 200 SDRINPVVRDHDYHTVEDIIPTTVLTDLDTSPGDSCAICLDLIEDDDDIRGLSCGHAFHA 259
Query: 509 ECLKKWLFIKNV-CPICKSEALATK 532
C+ WL + CP+CK++ K
Sbjct: 260 SCVDPWLTSRRASCPLCKADYYTPK 284
>ZFIN|ZDB-GENE-030131-1044 [details] [associations]
symbol:rnf128a "ring finger protein 128a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 ZFIN:ZDB-GENE-030131-1044
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 EMBL:AL929305 eggNOG:NOG271676 KO:K10629
OrthoDB:EOG4JT06C EMBL:BC067341 IPI:IPI00487529 RefSeq:NP_997780.1
UniGene:Dr.4850 STRING:Q6NX00 Ensembl:ENSDART00000021462
GeneID:322325 KEGG:dre:322325 CTD:322325 InParanoid:Q6NX00
OMA:ETASHTH NextBio:20807753 Uniprot:Q6NX00
Length = 389
Score = 117 (46.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 478 DQEPG----SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
DQE G +C +C + Y+ + + L C+H +H C++ WL CP+CK + L
Sbjct: 246 DQEIGPDADACAVCIDSYKAGDVLSILTCNHFFHKSCIEPWLLEHRTCPMCKCDIL 301
Score = 57 (25.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 238 FIGQPFQPAGWLEQPSDGGGSSWTQAPAIPYMHGSNVSGAPMDSG--NMVVQR-YPET 292
F G+P GW+ G G ++T+ I M+G+ + D G N V+Q +P T
Sbjct: 86 FYGRPNGSKGWIALIQRGNGCTFTEKINIAAMNGAAAAIIFNDFGSENRVIQMSHPGT 143
>UNIPROTKB|H0Y9W0 [details] [associations]
symbol:RNF44 "RING finger protein 44" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC091934 HGNC:HGNC:19180 ChiTaRS:RNF44 EMBL:AC010316
Ensembl:ENST00000506378 Uniprot:H0Y9W0
Length = 226
Score = 125 (49.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 425 DIEDMSYEELLALGERIGNVNT-GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGS 483
D+E +YE LL L ER+G+ GL++ + QL + + P S E
Sbjct: 86 DVEMENYEALLNLAERLGDAKPRGLTKADI-EQLPSYRF----------NPDSHQSEQTL 134
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWL 515
C++C D+ + + L C+HE+H +C+ KWL
Sbjct: 135 CVVCFSDFEARQLLRVLPCNHEFHTKCVDKWL 166
>TAIR|locus:1005716857 [details] [associations]
symbol:AT5G08139 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AK117658 EMBL:AK221247 EMBL:AK220636 IPI:IPI00534815
RefSeq:NP_850790.1 UniGene:At.5451 UniGene:At.66679
ProteinModelPortal:Q8GYG0 SMR:Q8GYG0 EnsemblPlants:AT5G08139.1
GeneID:830709 KEGG:ath:AT5G08139 TAIR:At5g08139 eggNOG:NOG318722
InParanoid:Q8GYG0 OMA:CKDEMNI PhylomeDB:Q8GYG0
ProtClustDB:CLSN2918077 Genevestigator:Q8GYG0 Uniprot:Q8GYG0
Length = 376
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 459 TRVYLSATNYINLEEPASKDQEPGS-CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFI 517
++ +L+ + LE D + G C +C+++ K L C+H+YH+EC+ WL +
Sbjct: 285 SKSFLNNLPVVLLE--GENDDDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKV 342
Query: 518 KNVCPICKSE 527
+N CP+C+ E
Sbjct: 343 RNTCPVCRYE 352
>UNIPROTKB|F1NRC6 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0060816 "random
inactivation of X chromosome" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 GeneTree:ENSGT00700000104290 OMA:RNFGESD
GO:GO:0060816 EMBL:AADN02013542 IPI:IPI00573322
Ensembl:ENSGALT00000012569 Uniprot:F1NRC6
Length = 593
Score = 131 (51.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ LA+
Sbjct: 538 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 586
Score = 47 (21.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 323 IRNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPRHMGP 364
+ +N N +P+ PS + SQ SE +PR P
Sbjct: 143 VNRNNGNTNPETENEPSAEPSGGEDLENSQSDSE-IPRSESP 183
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 179 PDGVTPMDAACFSLPQYRGNGTPS 202
P G TP S PQ G+G+ S
Sbjct: 429 PSGPTPNQNVDASEPQNGGSGSSS 452
>TAIR|locus:2199665 [details] [associations]
symbol:AT1G22670 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0008233 KO:K15692 IPI:IPI00539695
RefSeq:NP_173681.1 UniGene:At.51727 ProteinModelPortal:F4I2Y3
SMR:F4I2Y3 PRIDE:F4I2Y3 EnsemblPlants:AT1G22670.1 GeneID:838873
KEGG:ath:AT1G22670 OMA:NYTANTF Uniprot:F4I2Y3
Length = 422
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 475 ASKDQEPG-SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFI-KNVCPICKSEALAT 531
A D G SC IC EDY +K+ L C H++H C+ WL + CP+CK +A T
Sbjct: 222 AKIDNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRDARTT 280
>CGD|CAL0004928 [details] [associations]
symbol:orf19.3425 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 CGD:CAL0004928 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AACQ01000064
EMBL:AACQ01000065 eggNOG:NOG282652 RefSeq:XP_716673.1
RefSeq:XP_716732.1 ProteinModelPortal:Q5A4L6 GeneID:3641647
GeneID:3641708 KEGG:cal:CaO19.10929 KEGG:cal:CaO19.3425
Uniprot:Q5A4L6
Length = 599
Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 32/88 (36%), Positives = 44/88 (50%)
Query: 443 NVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDC 502
N N EEI +QL +++ N N + S + GSC IC E D + + L C
Sbjct: 310 NNNNDNDEEIEMKQLNL-AEVNSKNDSN-DSQNSLHFDSGSCAICLEIIEDEDIVRGLIC 367
Query: 503 DHEYHAECLKKWLFIKNVC-PICKSEAL 529
H +HAECL WL + C P+CK + L
Sbjct: 368 GHVFHAECLDPWLIRRRACCPMCKRDYL 395
>UNIPROTKB|Q5A4L6 [details] [associations]
symbol:CaO19.10929 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 CGD:CAL0004928 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AACQ01000064
EMBL:AACQ01000065 eggNOG:NOG282652 RefSeq:XP_716673.1
RefSeq:XP_716732.1 ProteinModelPortal:Q5A4L6 GeneID:3641647
GeneID:3641708 KEGG:cal:CaO19.10929 KEGG:cal:CaO19.3425
Uniprot:Q5A4L6
Length = 599
Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 32/88 (36%), Positives = 44/88 (50%)
Query: 443 NVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDC 502
N N EEI +QL +++ N N + S + GSC IC E D + + L C
Sbjct: 310 NNNNDNDEEIEMKQLNL-AEVNSKNDSN-DSQNSLHFDSGSCAICLEIIEDEDIVRGLIC 367
Query: 503 DHEYHAECLKKWLFIKNVC-PICKSEAL 529
H +HAECL WL + C P+CK + L
Sbjct: 368 GHVFHAECLDPWLIRRRACCPMCKRDYL 395
>TAIR|locus:2015248 [details] [associations]
symbol:AT1G63170 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC010795 eggNOG:NOG277561 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:AY058092 EMBL:AY086095 IPI:IPI00547063
PIR:C96657 RefSeq:NP_564810.1 UniGene:At.26656
ProteinModelPortal:Q8LDB8 SMR:Q8LDB8 EnsemblPlants:AT1G63170.1
GeneID:842621 KEGG:ath:AT1G63170 TAIR:At1g63170 InParanoid:Q8LDB8
OMA:ANTMISF PhylomeDB:Q8LDB8 Genevestigator:Q8LDB8 Uniprot:Q8LDB8
Length = 381
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALATKS 533
E C IC Y D ++ L C H +H C+ KWL+I CP+CK L + +
Sbjct: 321 EDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKSSN 374
>UNIPROTKB|Q2TA44 [details] [associations]
symbol:RNF148 "RING finger protein 148" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG057659 EMBL:BC111122 IPI:IPI00712761
RefSeq:NP_001074205.1 UniGene:Bt.48759 ProteinModelPortal:Q2TA44
PRIDE:Q2TA44 GeneID:538888 KEGG:bta:538888 CTD:378925
NextBio:20877645 Uniprot:Q2TA44
Length = 303
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 455 RQLKTRVYLSATNYINLE--EPASKDQEPG--SCIICQEDYRDNEKIGTLDCDHEYHAEC 510
RQLK V A + L + K+ EP +C++C + Y+ + + L C H +H C
Sbjct: 224 RQLKADVR-KAIGKLQLRVLQEGDKELEPDEDNCVVCFDIYKPQDVVRILTCKHIFHKAC 282
Query: 511 LKKWLFIKNVCPICKSEALAT 531
+ WL CP+CK + L T
Sbjct: 283 IDPWLLAHRTCPMCKCDILQT 303
>TAIR|locus:2092231 [details] [associations]
symbol:AT3G19950 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AB025631 eggNOG:NOG235630 EMBL:AY095995
EMBL:BT000583 EMBL:AK118283 IPI:IPI00518387 RefSeq:NP_188629.1
UniGene:At.20941 ProteinModelPortal:Q8LPN7 SMR:Q8LPN7 IntAct:Q8LPN7
STRING:Q8LPN7 PaxDb:Q8LPN7 PRIDE:Q8LPN7 EnsemblPlants:AT3G19950.1
GeneID:821533 KEGG:ath:AT3G19950 TAIR:At3g19950
HOGENOM:HOG000237766 InParanoid:Q9LT14 OMA:CSNGFVE PhylomeDB:Q8LPN7
ProtClustDB:CLSN2719206 Genevestigator:Q8LPN7 Uniprot:Q8LPN7
Length = 328
Score = 122 (48.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
E C +C +++ D + + C H +H +CL WL + N CP+C+ E
Sbjct: 212 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFE 259
Score = 47 (21.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 91 ASNLYVPYMPTLSSGMPVNHGSTDQLPSSRNF-GVIGASAEEYGRNS 136
+S+ + P S+ +P+ GS+ PS +F + G S + R++
Sbjct: 68 SSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARST 114
>ASPGD|ASPL0000007802 [details] [associations]
symbol:AN5845 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 EMBL:BN001301
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AACD01000100
OrthoDB:EOG4H75M9 RefSeq:XP_663449.1 ProteinModelPortal:Q5B0T5
EnsemblFungi:CADANIAT00007196 GeneID:2871167 KEGG:ani:AN5845.2
Uniprot:Q5B0T5
Length = 114
Score = 107 (42.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 458 KTRVYLSATNYINLEEPASKDQEP--GSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWL 515
KT + S+ E P +P SC IC + R ++ + ++ C H +HA CL+ W
Sbjct: 24 KTALRTSSLAVPTEESPLIASSQPVSPSCCICLDTVRPDDLVHSIPCRHVFHAGCLEFWY 83
Query: 516 FIKNV-CPICKSEAL 529
+N CP+C+ L
Sbjct: 84 LYENDNCPLCQRPLL 98
>UNIPROTKB|I3L0L6 [details] [associations]
symbol:RNF167 "E3 ubiquitin-protein ligase RNF167"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC004771
HGNC:HGNC:24544 ChiTaRS:RNF167 ProteinModelPortal:I3L0L6 SMR:I3L0L6
Ensembl:ENST00000576229 Bgee:I3L0L6 Uniprot:I3L0L6
Length = 315
Score = 127 (49.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 441 IGNVNTGLSEEIVARQLKTRVYLSATNYIN--LEEPASKDQEPGS----CIICQEDYRDN 494
+G + + ++AR ++ R L L++ + D + G C IC ++Y D
Sbjct: 146 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG 205
Query: 495 EKIGTLDCDHEYHAECLKKWLF-IKNVCPICK 525
+K+ L C H YH+ C+ WL + CPICK
Sbjct: 206 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICK 237
>TAIR|locus:1005452975 [details] [associations]
symbol:RIE1 "RING-finger protein for embryogenesis"
species:3702 "Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009790 "embryo development" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC006069 UniGene:At.47033 UniGene:At.66449
EMBL:AY168924 IPI:IPI00539076 RefSeq:NP_849924.1
ProteinModelPortal:Q8GUU2 SMR:Q8GUU2 EnsemblPlants:AT2G01735.1
GeneID:814703 KEGG:ath:AT2G01735 GeneFarm:3082 TAIR:At2g01735
eggNOG:NOG277561 HOGENOM:HOG000240958 InParanoid:Q8GUU2
PhylomeDB:Q8GUU2 ProtClustDB:CLSN2682050 Genevestigator:Q8GUU2
Uniprot:Q8GUU2
Length = 359
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
E C IC Y D ++ L C+H +H+ C+ KWL ++ CP+CK L
Sbjct: 303 EDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNIL 352
>TAIR|locus:2139717 [details] [associations]
symbol:AT4G11680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005774 "vacuolar membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005774
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161532 HSSP:Q9LRB7 EMBL:AL049500 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059121 EMBL:AY057713 EMBL:BT010750
IPI:IPI00525329 PIR:T04215 RefSeq:NP_567379.1 UniGene:At.20734
ProteinModelPortal:Q93Z92 SMR:Q93Z92 EnsemblPlants:AT4G11680.1
GeneID:826773 KEGG:ath:AT4G11680 GeneFarm:3078 TAIR:At4g11680
eggNOG:NOG288486 InParanoid:Q93Z92 OMA:HLEERQT PhylomeDB:Q93Z92
Genevestigator:Q93Z92 Uniprot:Q93Z92
Length = 390
Score = 128 (50.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 476 SKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
S E C IC +Y D ++ L C+H +H C+ KWL I + CP+CK L
Sbjct: 330 SLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNIL 383
Score = 43 (20.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 252 PSDGGGSSWTQAPAIPYM 269
P DGGGS T + + Y+
Sbjct: 171 PEDGGGSGLTNSSSQQYV 188
>UNIPROTKB|I3LB70 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP340171
Ensembl:ENSSSCT00000030994 Uniprot:I3LB70
Length = 577
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ LA+
Sbjct: 522 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 570
>TAIR|locus:2824666 [details] [associations]
symbol:AT1G35625 "AT1G35625" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008233 "peptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002684 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 UniGene:At.15140 UniGene:At.39523 KO:K15692
IPI:IPI00523259 RefSeq:NP_174799.4 ProteinModelPortal:F4HZZ4
SMR:F4HZZ4 EnsemblPlants:AT1G35625.1 GeneID:840462
KEGG:ath:AT1G35625 OMA:DECCINS PhylomeDB:F4HZZ4 Uniprot:F4HZZ4
Length = 201
Score = 121 (47.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICK 525
+C IC +DYR E + L C H+YHA C+ WL ++ CP+CK
Sbjct: 115 TCAICIDDYRVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCK 158
>UNIPROTKB|E1BBI7 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:DAAA02072549 IPI:IPI00705444
RefSeq:NP_001179251.1 UniGene:Bt.25074 ProteinModelPortal:E1BBI7
Ensembl:ENSBTAT00000020757 GeneID:539871 KEGG:bta:539871
NextBio:20878271 Uniprot:E1BBI7
Length = 611
Score = 131 (51.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ LA+
Sbjct: 556 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 604
>UNIPROTKB|F1RPK6 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132 OMA:RNFGESD
EMBL:CU856210 RefSeq:XP_003135236.1 RefSeq:XP_003360418.1
RefSeq:XP_003484178.1 UniGene:Ssc.9094 Ensembl:ENSSSCT00000013579
GeneID:100511426 GeneID:100738472 KEGG:ssc:100511426
KEGG:ssc:100738472 Uniprot:F1RPK6
Length = 623
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ LA+
Sbjct: 568 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 616
>UNIPROTKB|Q9NVW2 [details] [associations]
symbol:RLIM "E3 ubiquitin-protein ligase RLIM" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003714
"transcription corepressor activity" evidence=NAS] [GO:0060816
"random inactivation of X chromosome" evidence=IDA] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540 GO:GO:0004842
EMBL:CH471104 KO:K16271 EMBL:AF155109 EMBL:AJ271670 EMBL:AK001334
EMBL:AL513007 EMBL:BC013357 IPI:IPI00060628 RefSeq:NP_057204.2
RefSeq:NP_899196.1 UniGene:Hs.653288 ProteinModelPortal:Q9NVW2
SMR:Q9NVW2 IntAct:Q9NVW2 MINT:MINT-233446 STRING:Q9NVW2
PhosphoSite:Q9NVW2 DMDM:143811451 PaxDb:Q9NVW2 PRIDE:Q9NVW2
DNASU:51132 Ensembl:ENST00000332687 Ensembl:ENST00000349225
GeneID:51132 KEGG:hsa:51132 UCSC:uc004ebu.3 CTD:51132
GeneCards:GC0XM073803 HGNC:HGNC:13429 HPA:HPA018895 MIM:300379
neXtProt:NX_Q9NVW2 PharmGKB:PA164725373 HOGENOM:HOG000273881
InParanoid:Q9NVW2 OMA:RNFGESD OrthoDB:EOG48SGSW PhylomeDB:Q9NVW2
ChiTaRS:RLIM GenomeRNAi:51132 NextBio:53967 Bgee:Q9NVW2
CleanEx:HS_RNF12 Genevestigator:Q9NVW2 GermOnline:ENSG00000131263
GO:GO:0060816 Uniprot:Q9NVW2
Length = 624
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ LA+
Sbjct: 569 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 617
>UNIPROTKB|E2RSZ0 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:AAEX03026523 RefSeq:XP_859444.2
ProteinModelPortal:E2RSZ0 Ensembl:ENSCAFT00000027241 GeneID:491965
KEGG:cfa:491965 NextBio:20864655 Uniprot:E2RSZ0
Length = 625
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ LA+
Sbjct: 570 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 618
>TAIR|locus:2059793 [details] [associations]
symbol:XERICO species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006970 "response to osmotic
stress" evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0009687 "abscisic acid metabolic process" evidence=IMP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0009651
GO:GO:0008270 GO:GO:0009687 GO:GO:0010200 GO:GO:0009739
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC007213
HOGENOM:HOG000242879 KO:K16285 EMBL:AF324691 EMBL:AF326867
EMBL:AF339689 IPI:IPI00518775 PIR:E84455 RefSeq:NP_178507.1
RefSeq:NP_973416.1 UniGene:At.14524 ProteinModelPortal:Q9SI09
SMR:Q9SI09 STRING:Q9SI09 PaxDb:Q9SI09 PRIDE:Q9SI09
EnsemblPlants:AT2G04240.1 EnsemblPlants:AT2G04240.2 GeneID:814962
KEGG:ath:AT2G04240 TAIR:At2g04240 eggNOG:NOG275580
InParanoid:Q9SI09 OMA:CRHRLLP PhylomeDB:Q9SI09
ProtClustDB:CLSN2683970 ArrayExpress:Q9SI09 Genevestigator:Q9SI09
Uniprot:Q9SI09
Length = 162
Score = 114 (45.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 441 IGNVNTGLSEEIVARQLKTRVYL----SATNYINLEEPAS-KDQEPGSCIICQEDYRDNE 495
+ + N+ SE R + YL + T + E K Q C +C ++ +
Sbjct: 55 VSSENSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDS 114
Query: 496 KIGTLDCDHEYHAECLKKWLFIKNV-CPICKS 526
+I L C H +H CL+KW+ N+ CP+C++
Sbjct: 115 EINKLKCGHLFHKTCLEKWIDYWNITCPLCRT 146
>UNIPROTKB|Q9H6Y7 [details] [associations]
symbol:RNF167 "E3 ubiquitin-protein ligase RNF167"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0012505 "endomembrane system" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0045786 "negative regulation of
cell cycle" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0000209 "protein polyubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 EMBL:CH471108 GO:GO:0046872
GO:GO:0008270 GO:GO:0012505 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 GO:GO:0004842 GO:GO:0000209 GO:GO:0045786
EMBL:AL050060 EMBL:AL834284 EMBL:AK025329 EMBL:AY203930
EMBL:CR457340 EMBL:BC010139 IPI:IPI00023511 PIR:T08729
RefSeq:NP_056343.1 UniGene:Hs.7158 ProteinModelPortal:Q9H6Y7
SMR:Q9H6Y7 IntAct:Q9H6Y7 STRING:Q9H6Y7 PhosphoSite:Q9H6Y7
DMDM:74733620 PaxDb:Q9H6Y7 PeptideAtlas:Q9H6Y7 PRIDE:Q9H6Y7
Ensembl:ENST00000262482 Ensembl:ENST00000571816
Ensembl:ENST00000572430 Ensembl:ENST00000575111 GeneID:26001
KEGG:hsa:26001 UCSC:uc002fzs.3 CTD:26001 GeneCards:GC17P004845
HGNC:HGNC:24544 MIM:610431 neXtProt:NX_Q9H6Y7 PharmGKB:PA134953711
HOGENOM:HOG000234362 HOVERGEN:HBG063762 InParanoid:Q9H6Y7 KO:K15706
OMA:VCKQRVT OrthoDB:EOG4QJRP0 PhylomeDB:Q9H6Y7 ChiTaRS:RNF167
GenomeRNAi:26001 NextBio:47726 Bgee:Q9H6Y7 CleanEx:HS_RNF167
Genevestigator:Q9H6Y7 GermOnline:ENSG00000108523 Uniprot:Q9H6Y7
Length = 350
Score = 127 (49.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 441 IGNVNTGLSEEIVARQLKTRVYLSATNYIN--LEEPASKDQEPGS----CIICQEDYRDN 494
+G + + ++AR ++ R L L++ + D + G C IC ++Y D
Sbjct: 181 VGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDG 240
Query: 495 EKIGTLDCDHEYHAECLKKWLF-IKNVCPICK 525
+K+ L C H YH+ C+ WL + CPICK
Sbjct: 241 DKLRVLPCAHAYHSRCVDPWLTQTRKTCPICK 272
>WB|WBGene00012194 [details] [associations]
symbol:toe-4 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG291583 GeneTree:ENSGT00670000097625 EMBL:Z82062
PIR:T26069 RefSeq:NP_493231.1 ProteinModelPortal:Q9XUM8 SMR:Q9XUM8
DIP:DIP-26096N IntAct:Q9XUM8 MINT:MINT-1081120 STRING:Q9XUM8
EnsemblMetazoa:W02A11.3 GeneID:173144 KEGG:cel:CELE_W02A11.3
UCSC:W02A11.3 CTD:173144 WormBase:W02A11.3 HOGENOM:HOG000020064
InParanoid:Q9XUM8 OMA:FHPECIY NextBio:878453 Uniprot:Q9XUM8
Length = 489
Score = 131 (51.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 478 DQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
+++ +C +C + D E I L C+H +H EC+ KWL I CP+C+ E
Sbjct: 427 EEDEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCREE 476
Score = 42 (19.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 422 MRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASK 477
++ D ED+S E+L G RI ++ EE++ + + + +EP S+
Sbjct: 103 LQTDTEDVS--EVLDGGTRISDMKRVRREELLDQSSLDGITFETSGTNTSDEPHSQ 156
>UNIPROTKB|K7GLV3 [details] [associations]
symbol:LOC100519085 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
EMBL:CU407202 EMBL:CU424450 Ensembl:ENSSSCT00000032920
Uniprot:K7GLV3
Length = 138
Score = 106 (42.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 478 DQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
D + +C +C E+++ + I L C H +H C+ WL CP+CK + +
Sbjct: 3 DVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVI 54
>UNIPROTKB|Q9Y6U7 [details] [associations]
symbol:RNF215 "RING finger protein 215" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:NOG260672 EMBL:AC004997 IPI:IPI00164063
RefSeq:NP_001017981.1 UniGene:Hs.592194 ProteinModelPortal:Q9Y6U7
SMR:Q9Y6U7 DMDM:147732500 PRIDE:Q9Y6U7 DNASU:200312
Ensembl:ENST00000382363 GeneID:200312 KEGG:hsa:200312
UCSC:uc003ahp.3 CTD:200312 GeneCards:GC22M030773 H-InvDB:HIX0041363
HGNC:HGNC:33434 HPA:HPA019262 neXtProt:NX_Q9Y6U7
PharmGKB:PA162401807 HOGENOM:HOG000154164 HOVERGEN:HBG080631
InParanoid:Q9Y6U7 OMA:EAPVEGW GenomeRNAi:200312 NextBio:89883
ArrayExpress:Q9Y6U7 Bgee:Q9Y6U7 CleanEx:HS_RNF215
Genevestigator:Q9Y6U7 Uniprot:Q9Y6U7
Length = 377
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 451 EIVARQLKTRVYLSATNYINLEEPASKDQEPGS--CIICQEDYRDNEKIGTLDCDHEYHA 508
++ R++ R+ T L A +PG+ C +C + + + + + L C HE+H
Sbjct: 290 DLFKRRVVRRLASLKTRRCRLSRAAQGLPDPGAETCAVCLDYFCNKQWLRVLPCKHEFHR 349
Query: 509 ECLKKWLFIKNVCPICKSEALATK 532
+C+ WL ++ CP+CK L +
Sbjct: 350 DCVDPWLMLQQTCPLCKFNVLGNR 373
>ZFIN|ZDB-GENE-040426-772 [details] [associations]
symbol:rnf13 "ring finger protein 13" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 ZFIN:ZDB-GENE-040426-772 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:BC044449 IPI:IPI00771289
RefSeq:NP_957338.1 UniGene:Dr.80141 ProteinModelPortal:Q803J9
GeneID:793981 KEGG:dre:793981 InParanoid:Q803J9 NextBio:20931664
ArrayExpress:Q803J9 Uniprot:Q803J9
Length = 377
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 383 EALRQRSLPHLRVLPSDGVALLEIPDF-YEVGNFIDRHRDMRLDIEDMSYEELLALGERI 441
+ L+Q +P + + +L E D+ YE G + D L +E L+ +G +
Sbjct: 138 DILKQIDIPSVFIGEEAANSLKE--DYIYEKGGHVILMPDFSLPLEYYLIPFLIIVGICL 195
Query: 442 GNVNTGLSEEIVARQLKTRVYLSATNYINLEE-PASKDQEPGS---CIICQEDYRDNEKI 497
+ + + V Q + R S L++ P K ++ S C IC ++Y + E++
Sbjct: 196 ILIVVFMITKFV--QDRHRARRSRLRKDQLKKLPIHKFKKGDSYDVCAICLDEYEEGERL 253
Query: 498 GTLDCDHEYHAECLKKWLF-IKNVCPICKSEAL 529
L C H YH +C+ WL K CP+CK + +
Sbjct: 254 RVLPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
>TAIR|locus:2037683 [details] [associations]
symbol:RHA2A "RING-H2 finger A2A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IMP] [GO:0009789 "positive
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0047484 "regulation of response to osmotic
stress" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737
GO:GO:0009738 GO:GO:0009789 GO:GO:0046872 GO:GO:0009651
GO:GO:0008270 EMBL:AC007591 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0047484 EMBL:AF078822 EMBL:DQ059097
EMBL:AY075590 EMBL:AY094057 EMBL:AY088303 IPI:IPI00526860
PIR:T51842 RefSeq:NP_172962.1 UniGene:At.10851
ProteinModelPortal:Q9ZT50 SMR:Q9ZT50 IntAct:Q9ZT50 STRING:Q9ZT50
EnsemblPlants:AT1G15100.1 GeneID:838073 KEGG:ath:AT1G15100
GeneFarm:4092 TAIR:At1g15100 eggNOG:NOG316107 HOGENOM:HOG000090787
InParanoid:Q9ZT50 KO:K16282 OMA:EVRKLEC PhylomeDB:Q9ZT50
ProtClustDB:CLSN2679440 Genevestigator:Q9ZT50 Uniprot:Q9ZT50
Length = 155
Score = 111 (44.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 482 GS-CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKN-VCPICKS 526
GS C++C ++ E++ L+C H +H +CL+ WL N CP+C+S
Sbjct: 83 GSDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRS 129
>TAIR|locus:2200301 [details] [associations]
symbol:AT1G68070 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684 GO:GO:0005774
GO:GO:0046872 GO:GO:0008270 EMBL:AC012563 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 ProtClustDB:CLSN2682050
EMBL:BT024880 IPI:IPI00540766 PIR:H96703 RefSeq:NP_176974.1
UniGene:At.35572 ProteinModelPortal:Q9C9X1 SMR:Q9C9X1 PRIDE:Q9C9X1
EnsemblPlants:AT1G68070.1 GeneID:843135 KEGG:ath:AT1G68070
TAIR:At1g68070 InParanoid:Q9C9X1 OMA:MLWNTAF PhylomeDB:Q9C9X1
Genevestigator:Q9C9X1 Uniprot:Q9C9X1
Length = 343
Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
E C IC Y D ++ +L C+H +H+ C+ KWL + CP+CK L
Sbjct: 288 EDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNIL 337
>TAIR|locus:2118056 [details] [associations]
symbol:AT4G12140 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL049638
EMBL:AL161533 eggNOG:NOG246550 HOGENOM:HOG000153211 IPI:IPI00529226
PIR:T06621 RefSeq:NP_192951.1 UniGene:At.65367
ProteinModelPortal:Q9SZ79 SMR:Q9SZ79 DNASU:826822
EnsemblPlants:AT4G12140.1 GeneID:826822 KEGG:ath:AT4G12140
TAIR:At4g12140 InParanoid:Q9SZ79 OMA:NDPIPKP PhylomeDB:Q9SZ79
ProtClustDB:CLSN2915911 ArrayExpress:Q9SZ79 Genevestigator:Q9SZ79
Uniprot:Q9SZ79
Length = 202
Score = 120 (47.3 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 472 EEPASKDQEPGSCIICQEDYRDNEKIGT--LDCDHEYHAECLKKWLFIKNVCPICKS 526
EE S + E SC IC + + K G + C H +H+ CL +WL KN CP+C++
Sbjct: 141 EELKSFNMETDSCSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMCRT 197
>MGI|MGI:1915095 [details] [associations]
symbol:Rnf115 "ring finger protein 115" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1915095 Prosite:PS00518
GO:GO:0005829 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0051865
GeneTree:ENSGT00530000062967 CTD:27246 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 OMA:STHFAEF
OrthoDB:EOG4VX262 EMBL:AK008329 EMBL:AK011584 EMBL:BC023113
IPI:IPI00177287 RefSeq:NP_080682.3 UniGene:Mm.386792
ProteinModelPortal:Q9D0C1 SMR:Q9D0C1 IntAct:Q9D0C1 MINT:MINT-217430
STRING:Q9D0C1 PhosphoSite:Q9D0C1 PRIDE:Q9D0C1
Ensembl:ENSMUST00000029740 GeneID:67845 KEGG:mmu:67845
UCSC:uc008qoe.2 InParanoid:Q9D0C1 NextBio:325695 Bgee:Q9D0C1
Genevestigator:Q9D0C1 GermOnline:ENSMUSG00000028098 Uniprot:Q9D0C1
Length = 305
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C +C+EDY EK+ L C+H +H+ C+ WL + + CP+C+
Sbjct: 229 CPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCR 270
>TAIR|locus:2101447 [details] [associations]
symbol:AT3G60080 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AL138658 EMBL:BT020239 EMBL:BT020570 EMBL:AK229330
IPI:IPI00527822 PIR:T47832 RefSeq:NP_191567.1 UniGene:At.34507
ProteinModelPortal:Q9M1D5 SMR:Q9M1D5 PRIDE:Q9M1D5
EnsemblPlants:AT3G60080.1 GeneID:825178 KEGG:ath:AT3G60080
TAIR:At3g60080 eggNOG:NOG323832 HOGENOM:HOG000153215
InParanoid:Q9M1D5 OMA:EPERRTY PhylomeDB:Q9M1D5
ProtClustDB:CLSN2685030 Genevestigator:Q9M1D5 Uniprot:Q9M1D5
Length = 306
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 475 ASKDQEPGS---CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
++ D +P S C +C+ED+ E L C H YH++C+ WL N CP+C+ E T
Sbjct: 157 STDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFELPTT 216
>FB|FBgn0004919 [details] [associations]
symbol:gol "goliath" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0007498 "mesoderm
development" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF00097 Pfam:PF02225
Prosite:PS00518 EMBL:AE013599 GO:GO:0016021 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0001707 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG302028 ChiTaRS:OSTM1 EMBL:AY069169 EMBL:M97204 PIR:JC1495
RefSeq:NP_001163300.1 RefSeq:NP_001246517.1 RefSeq:NP_523864.3
RefSeq:NP_726508.1 UniGene:Dm.19312 ProteinModelPortal:Q06003
SMR:Q06003 EnsemblMetazoa:FBtr0072459 GeneID:38006
KEGG:dme:Dmel_CG2679 UCSC:CG2679-RB CTD:38006 FlyBase:FBgn0004919
GeneTree:ENSGT00700000104211 HOGENOM:HOG000238978 InParanoid:Q06003
OMA:DKEIDND OrthoDB:EOG4CJSZ6 PhylomeDB:Q06003 GenomeRNAi:38006
NextBio:806511 Bgee:Q06003 GermOnline:CG2679 Uniprot:Q06003
Length = 461
Score = 128 (50.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
KD + C IC E Y+ + I L C HE+H C+ WL CP+CK + L
Sbjct: 296 KDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVL 348
>MGI|MGI:1917760 [details] [associations]
symbol:Rnf167 "ring finger protein 167" species:10090 "Mus
musculus" [GO:0000209 "protein polyubiquitination" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0045786 "negative regulation of
cell cycle" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137
MGI:MGI:1917760 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0012505
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0000209 GO:GO:0045786 EMBL:AL596117
GeneTree:ENSGT00700000104226 CTD:26001 HOGENOM:HOG000234362
HOVERGEN:HBG063762 KO:K15706 OrthoDB:EOG4QJRP0 ChiTaRS:RNF167
EMBL:AK154071 EMBL:BC010777 IPI:IPI00129099 RefSeq:NP_081721.1
UniGene:Mm.261818 ProteinModelPortal:Q91XF4 SMR:Q91XF4
STRING:Q91XF4 PhosphoSite:Q91XF4 PRIDE:Q91XF4
Ensembl:ENSMUST00000037534 GeneID:70510 KEGG:mmu:70510
InParanoid:Q91XF4 OMA:DSWLTSW NextBio:331771 Bgee:Q91XF4
CleanEx:MM_RNF167 Genevestigator:Q91XF4
GermOnline:ENSMUSG00000040746 Uniprot:Q91XF4
Length = 347
Score = 126 (49.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICK 525
K E C IC ++Y D +K+ L C H YH+ C+ WL + CPICK
Sbjct: 223 KGDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICK 272
>UNIPROTKB|F1PTA3 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0050681 "androgen receptor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044314 "protein
K27-linked ubiquitination" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0060765
GO:GO:0070936 GO:GO:0085020 GO:GO:0030517 GO:GO:0044314
GeneTree:ENSGT00700000104290 CTD:6049 OMA:TIRIPLR EMBL:AAEX03014252
RefSeq:XP_003433344.1 RefSeq:XP_534526.2 Ensembl:ENSCAFT00000011085
Ensembl:ENSCAFT00000044298 GeneID:477332 KEGG:cfa:477332
Uniprot:F1PTA3
Length = 683
Score = 130 (50.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 444 VNTGLSEEIVARQLKTRV-YLSATNYINLEEPASKDQEPGS-CIICQEDYRDNEKIGTLD 501
+N G ++ + K ++ LS NY E S D E G C +C DY K+ L
Sbjct: 592 LNEGDDDDHIRGLTKEQIDNLSTRNY----EHNSIDSELGKICSVCISDYVTGNKLRQLP 647
Query: 502 CDHEYHAECLKKWLFIKNVCPICKSEALAT 531
C HE+H C+ +WL CPIC+ L +
Sbjct: 648 CMHEFHIHCIDRWLSENCTCPICRQPVLGS 677
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 315 HPPPPFQGI-RNHNTNVHPQVAAASFRVPSSYRTMNISQDGSEMVPR 360
H P I R+H T+ + A+ R S ++N S D S +PR
Sbjct: 169 HTGIPLSDISRDHTTSRQQRSASPVARRTRSQTSVNFS-DSSSNIPR 214
>MGI|MGI:1918550 [details] [associations]
symbol:Rnf148 "ring finger protein 148" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 MGI:MGI:1918550 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH466533
GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 CTD:378925 eggNOG:NOG254647 OMA:IDPWLLA
EMBL:AY155440 EMBL:AK017027 EMBL:AC155850 RefSeq:NP_082030.1
UniGene:Mm.443309 ProteinModelPortal:G3X9R7 SMR:G3X9R7 PRIDE:G3X9R7
Ensembl:ENSMUST00000104979 GeneID:71300 KEGG:mmu:71300
NextBio:333489 Bgee:G3X9R7 Uniprot:G3X9R7
Length = 316
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 455 RQLKTRVYLSATNYINLE--EPASKDQEPG--SCIICQEDYRDNEKIGTLDCDHEYHAEC 510
RQLK V A + L + K+ +P SC++C + Y+ + I L C H +H C
Sbjct: 237 RQLKADVK-KAIGQLQLRVLQDGDKELDPNEDSCVVCFDMYKAQDVIRILTCKHFFHKTC 295
Query: 511 LKKWLFIKNVCPICKSEAL 529
+ WL CP+CK + L
Sbjct: 296 IDPWLLAHRTCPMCKCDIL 314
>TAIR|locus:2206540 [details] [associations]
symbol:AT1G57730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
EMBL:AC079733 HOGENOM:HOG000131741 IPI:IPI00522937 PIR:F96611
RefSeq:NP_176085.1 UniGene:At.66046 ProteinModelPortal:Q9FVT1
SMR:Q9FVT1 DNASU:842148 EnsemblPlants:AT1G57730.1 GeneID:842148
KEGG:ath:AT1G57730 TAIR:At1g57730 eggNOG:NOG324968
InParanoid:Q9FVT1 PhylomeDB:Q9FVT1 ProtClustDB:CLSN2912817
Genevestigator:Q9FVT1 Uniprot:Q9FVT1
Length = 174
Score = 116 (45.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 39/132 (29%), Positives = 63/132 (47%)
Query: 399 DGVALLEIPDFY--EVGNFIDRHRDMRLDIEDMSYEELLALGERIGNVNTGLSEEIVARQ 456
D L +I +V NF D H+ L +E + + + ++ G R+ V L+ E V
Sbjct: 36 DDAPLFQITQLILKDVVNF-DPHKTSPL-LETI-FPDSIS-GTRLC-VEMALASERVPAP 90
Query: 457 LKTRVYLSATNYINLEEPASKDQEPGSCIICQEDY-RDNEKIGTL-DCDHEYHAECLKKW 514
+YL T E +S E +C IC ED +D + +C H +H +C+ KW
Sbjct: 91 FD--MYLHVTVRFVEESTSSSPLENKTCAICLEDMSQDVHDYQEMPNCPHVFHNDCIYKW 148
Query: 515 LFIKNVCPICKS 526
L N+CP+C++
Sbjct: 149 LGHSNLCPLCRT 160
>ZFIN|ZDB-GENE-091204-252 [details] [associations]
symbol:si:dkeyp-86f7.4 "si:dkeyp-86f7.4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 ZFIN:ZDB-GENE-091204-252
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 EMBL:BX957231 EMBL:CR293501
IPI:IPI00491152 Ensembl:ENSDART00000042727 Uniprot:E9QIM4
Length = 319
Score = 125 (49.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 478 DQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
D + C++C + Y+ E++ L C H YH +C++ WL CP+CK L
Sbjct: 256 DSDDTGCVVCTDSYQRGEQVTVLPCRHLYHKKCIEPWLLEHPTCPMCKYNIL 307
>TAIR|locus:2144088 [details] [associations]
symbol:AT5G06490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
EMBL:AP002543 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 IPI:IPI00540295 RefSeq:NP_196267.1
UniGene:At.65493 ProteinModelPortal:Q9FG21 SMR:Q9FG21
EnsemblPlants:AT5G06490.1 GeneID:830537 KEGG:ath:AT5G06490
TAIR:At5g06490 eggNOG:NOG316846 InParanoid:Q9FG21 OMA:CTRSHIS
PhylomeDB:Q9FG21 ProtClustDB:CLSN2916514 Genevestigator:Q9FG21
GermOnline:AT5G06490 Uniprot:Q9FG21
Length = 197
Score = 119 (46.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 447 GLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTL-DCDHE 505
GL+EE++ K + +Y +L++ +S C IC DY+ + I L DC+H
Sbjct: 96 GLTEEVIKGFPKLPYEEARVSY-SLQKESSTTS---CCSICLADYKKMDMIRVLPDCNHL 151
Query: 506 YHAECLKKWLFIKNVCPICKSEAL 529
+H C+ WL + CP+C++ L
Sbjct: 152 FHDNCVDPWLRLHPTCPVCRTSPL 175
>TAIR|locus:2034924 [details] [associations]
symbol:AT1G18780 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC011809
HOGENOM:HOG000152571 EMBL:DQ059091 IPI:IPI00546155 PIR:F86321
RefSeq:NP_173313.1 UniGene:At.64833 ProteinModelPortal:Q9M9U8
SMR:Q9M9U8 PRIDE:Q9M9U8 EnsemblPlants:AT1G18780.1 GeneID:838460
KEGG:ath:AT1G18780 TAIR:At1g18780 eggNOG:NOG273075
InParanoid:Q9M9U8 OMA:HEFDEEC PhylomeDB:Q9M9U8
Genevestigator:Q9M9U8 Uniprot:Q9M9U8
Length = 325
Score = 125 (49.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 405 EIPDFYEVGNFIDRHR-DMRLD--IEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRV 461
E+ F+ + + D H D IE+ S+ ++ E + V+ + + + +++
Sbjct: 200 EVVLFHGLPHLRDEHHASFGFDHQIEEASHSQI----EEVFQVSFNETNTVRLKPA-SKL 254
Query: 462 YLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVC 521
+ A N ++ + E C IC E++ D I TL C HE+ EC+ +W +VC
Sbjct: 255 TVGALNRKTYKKASGVVCENDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVC 314
Query: 522 PICKSE 527
P+C+ E
Sbjct: 315 PLCRLE 320
>TAIR|locus:2169712 [details] [associations]
symbol:AT5G05530 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB005241
HSSP:P28990 EMBL:BT005669 EMBL:AK118964 IPI:IPI00524026
RefSeq:NP_196172.1 UniGene:At.32987 ProteinModelPortal:Q9FFG2
SMR:Q9FFG2 EnsemblPlants:AT5G05530.1 GeneID:830436
KEGG:ath:AT5G05530 TAIR:At5g05530 eggNOG:NOG261368
HOGENOM:HOG000152441 OMA:NECTICL PhylomeDB:Q9FFG2
ProtClustDB:CLSN2916375 Genevestigator:Q9FFG2 Uniprot:Q9FFG2
Length = 199
Score = 119 (46.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 33/111 (29%), Positives = 50/111 (45%)
Query: 418 RHRDMRL-DIEDMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYL-SATNYINLEEPA 475
RH + L D+E E L+ G ++ + G + E+ A +L + PA
Sbjct: 80 RHVSLVLADVEPRIREILVLYGIQLIGESRGRAFELKAEAEDVEYHLMEESKGWTTCIPA 139
Query: 476 SKDQEPGSCIICQEDY-RDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C IC E+ D E I T DC H +H CL +W+ K+ CP+C+
Sbjct: 140 KSITPVNECTICLEELCHDEESIETHDCCHVFHKLCLWRWIRTKSSCPLCR 190
>RGD|1596695 [details] [associations]
symbol:Rnf133 "ring finger protein 133" species:10116 "Rattus
norvegicus" [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137 RGD:1596695
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990 CTD:168433
KO:K15702 EMBL:BC079249 IPI:IPI00464498 RefSeq:NP_001037743.1
UniGene:Rn.225546 ProteinModelPortal:Q6AY01 PhosphoSite:Q6AY01
PRIDE:Q6AY01 GeneID:681395 KEGG:rno:681395 UCSC:RGD:1596695
NextBio:720849 Genevestigator:Q6AY01 Uniprot:Q6AY01
Length = 381
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
SC+IC E Y+ NE + L C H +H C+ W+ CP+CK + L
Sbjct: 255 SCVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCKCDIL 301
>MGI|MGI:2677436 [details] [associations]
symbol:Rnf133 "ring finger protein 133" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 MGI:MGI:2677436 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:CH466533 GO:GO:0051865 GeneTree:ENSGT00700000104211
HOGENOM:HOG000231432 CTD:168433 eggNOG:NOG315052 KO:K15702
OMA:NCIDPWI EMBL:AK028082 EMBL:BC116423 EMBL:BC116424 EMBL:AY155441
IPI:IPI00224213 IPI:IPI00229555 RefSeq:NP_937894.1
UniGene:Mm.436547 ProteinModelPortal:Q14B02 SMR:Q14B02
PhosphoSite:Q14B02 PRIDE:Q14B02 Ensembl:ENSMUST00000063548
Ensembl:ENSMUST00000115354 GeneID:386611 KEGG:mmu:386611
UCSC:uc009bbk.1 InParanoid:Q14B02 NextBio:405539 Bgee:Q14B02
Genevestigator:Q14B02 Uniprot:Q14B02
Length = 382
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
SC+IC E Y+ NE + L C H +H C+ W+ CP+CK + L
Sbjct: 255 SCVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCKCDIL 301
>TAIR|locus:2177881 [details] [associations]
symbol:AT5G41350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006914 "autophagy" evidence=RCA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005739 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 ProtClustDB:CLSN2697998
EMBL:AY048293 EMBL:AY143828 IPI:IPI00528415 RefSeq:NP_568590.1
UniGene:At.6481 ProteinModelPortal:Q94AB7 SMR:Q94AB7 IntAct:Q94AB7
PRIDE:Q94AB7 EnsemblPlants:AT5G41350.1 GeneID:834137
KEGG:ath:AT5G41350 TAIR:At5g41350 eggNOG:NOG314203
InParanoid:Q94AB7 OMA:AYYYYPR PhylomeDB:Q94AB7
Genevestigator:Q94AB7 Uniprot:Q94AB7
Length = 212
Score = 120 (47.3 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 41/164 (25%), Positives = 72/164 (43%)
Query: 368 TGFRIYRSPREGPVPEALRQRSLPHLRVLPSDGVALLEIPDFYEVGNFIDRHRDMRLDIE 427
TG + + E P+A LP +P + + + P E +D R++ +D
Sbjct: 47 TGVVVVDTNLETSSPDAYIPPPLPTPFDVP---IGIPQTPASGEEATCVDI-REVSVDSA 102
Query: 428 DMSYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYIN--LEEPASKD-QEPGSC 484
+ + G +G V T S + +++T + L +T I+ L + +E C
Sbjct: 103 NTESAQETVDGITLG-VPTTCSHKETDSKIQTEIDLESTEEIDPKLSKAVFIPIEEEEDC 161
Query: 485 IICQEDYR-DNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
IC E+Y +N K+ CDH +H C+ +W+ CP+C E
Sbjct: 162 PICLEEYDIENPKL-VAKCDHHFHLACILEWMERSETCPVCNKE 204
>UNIPROTKB|H0Y2L4 [details] [associations]
symbol:RNF215 "RING finger protein 215" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC004832 EMBL:AC004997 HGNC:HGNC:33434
ProteinModelPortal:H0Y2L4 Ensembl:ENST00000215798 Uniprot:H0Y2L4
Length = 343
Score = 125 (49.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 451 EIVARQLKTRVYLSATNYINLEEPASKDQEPGS--CIICQEDYRDNEKIGTLDCDHEYHA 508
++ R++ R+ T L A +PG+ C +C + + + + + L C HE+H
Sbjct: 228 DLFKRRVVRRLASLKTRRCRLSRAAQGLPDPGAETCAVCLDYFCNKQWLRVLPCKHEFHR 287
Query: 509 ECLKKWLFIKNVCPICKSEAL 529
+C+ WL ++ CP+CK L
Sbjct: 288 DCVDPWLMLQQTCPLCKFNVL 308
>UNIPROTKB|F1SDD6 [details] [associations]
symbol:F1SDD6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:CU467072
Ensembl:ENSSSCT00000007331 OMA:HRANERS Uniprot:F1SDD6
Length = 231
Score = 121 (47.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C +C+EDY E++ L C+H +H+ C+ WL + + CP+C+
Sbjct: 155 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDACPVCR 196
>RGD|1305972 [details] [associations]
symbol:Rnf167 "ring finger protein 167" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045786 "negative regulation of cell
cycle" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1305972 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0012505 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0000209 GO:GO:0045786
GeneTree:ENSGT00700000104226 CTD:26001 HOGENOM:HOG000234362
HOVERGEN:HBG063762 KO:K15706 OrthoDB:EOG4QJRP0 OMA:DSWLTSW
EMBL:BC083670 IPI:IPI00202851 RefSeq:NP_001008362.1
UniGene:Rn.26488 ProteinModelPortal:Q5XIL0 PRIDE:Q5XIL0
Ensembl:ENSRNOT00000005242 GeneID:360554 KEGG:rno:360554
UCSC:RGD:1305972 InParanoid:Q5XIL0 NextBio:673199
Genevestigator:Q5XIL0 GermOnline:ENSRNOG00000003879 Uniprot:Q5XIL0
Length = 349
Score = 125 (49.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICK 525
K E C IC ++Y D +K+ L C H YH+ C+ WL + CPICK
Sbjct: 223 KGDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICK 272
>UNIPROTKB|F1MFJ1 [details] [associations]
symbol:F1MFJ1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045786 "negative regulation of cell cycle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104226 EMBL:DAAA02051040 IPI:IPI00709594
Ensembl:ENSBTAT00000017244 OMA:NKREANI Uniprot:F1MFJ1
Length = 350
Score = 125 (49.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICK 525
C IC ++Y D +K+ L C H YH C+ WL K CPICK
Sbjct: 230 CAICLDEYEDGDKLRVLPCAHAYHCRCVDPWLTQTKKTCPICK 272
>TAIR|locus:1006230720 [details] [associations]
symbol:AT1G24580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K16285
ProtClustDB:CLSN2681281 EMBL:BT014952 EMBL:BT020604 IPI:IPI00542297
RefSeq:NP_973908.1 UniGene:At.49461 ProteinModelPortal:Q6GKW2
SMR:Q6GKW2 EnsemblPlants:AT1G24580.1 GeneID:2745762
KEGG:ath:AT1G24580 eggNOG:NOG279711 OMA:FQIVASE
Genevestigator:Q6GKW2 Uniprot:Q6GKW2
Length = 113
Score = 104 (41.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 450 EEIVARQLKTRVYLSATNYINLEEPASKDQEPG-SCIICQEDYRDNEKIGTL-DCDHEYH 507
++ V R++ + S N+EE +++E G C +C +++ E++ L C H +H
Sbjct: 37 DDFVTRRISITQFKSLCE--NIEE---EEEEKGVECCVCLCGFKEEEEVSELVSCKHFFH 91
Query: 508 AECLKKWLFIKN--VCPICKS 526
CL W F N CP+C+S
Sbjct: 92 RACLDNW-FGNNHTTCPLCRS 111
>DICTYBASE|DDB_G0278501 [details] [associations]
symbol:DDB_G0278501 "C3HC4 type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0278501 GO:GO:0046872
EMBL:AAFI02000023 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 RefSeq:XP_642403.1
ProteinModelPortal:Q54XZ9 EnsemblProtists:DDB0205494 GeneID:8621608
KEGG:ddi:DDB_G0278501 InParanoid:Q54XZ9 OMA:ISIFYLR Uniprot:Q54XZ9
Length = 666
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 466 TNYINLEEPAS---KDQEPGS-CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVC 521
T Y N P S + +E G C+IC D + +K +C+H +H +CL +WL K C
Sbjct: 596 TKY-NFYRPISMEIRSREEGQGCVICMSDVEEGQKYMLTECNHLFHEKCLLQWLEFKAQC 654
Query: 522 PICKSE 527
P C+SE
Sbjct: 655 PTCRSE 660
>WB|WBGene00012944 [details] [associations]
symbol:Y47D3B.11 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG282652
EMBL:AL031635 GeneTree:ENSGT00530000063291 PIR:T26958
RefSeq:NP_499473.2 ProteinModelPortal:Q9U2B7 SMR:Q9U2B7
EnsemblMetazoa:Y47D3B.11 GeneID:176575 KEGG:cel:CELE_Y47D3B.11
UCSC:Y47D3B.11 CTD:176575 WormBase:Y47D3B.11 HOGENOM:HOG000019949
InParanoid:Q9U2B7 OMA:FCGHEFH NextBio:893146 Uniprot:Q9U2B7
Length = 487
Score = 127 (49.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 462 YLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVC 521
YL+ + +S C+IC E+Y + ++ L C HE+H +C+ WL K C
Sbjct: 295 YLAVFGSLTSVAQSSSHSAQERCVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRC 354
Query: 522 PICKSEAL 529
P+C+ + +
Sbjct: 355 PLCQFDVV 362
>UNIPROTKB|D4A8S6 [details] [associations]
symbol:Rlim "Protein Rlim" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1559832 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00947970 Ensembl:ENSRNOT00000067009
ArrayExpress:D4A8S6 Uniprot:D4A8S6
Length = 597
Score = 128 (50.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ L++
Sbjct: 542 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSS 590
>MGI|MGI:1342291 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0060816 "random inactivation of X
chromosome" evidence=ISO;IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1342291
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540
GO:GO:0004842 EMBL:CH466564 KO:K16271 GeneTree:ENSGT00700000104290
CTD:51132 HOGENOM:HOG000273881 OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:AF069992 EMBL:AK013207 EMBL:AK029295 EMBL:AL805911
EMBL:BC012960 IPI:IPI00123915 RefSeq:NP_035406.3 UniGene:Mm.427762
UniGene:Mm.490660 ProteinModelPortal:Q9WTV7 SMR:Q9WTV7
DIP:DIP-46445N STRING:Q9WTV7 PhosphoSite:Q9WTV7 PRIDE:Q9WTV7
Ensembl:ENSMUST00000070705 Ensembl:ENSMUST00000121153 GeneID:19820
KEGG:mmu:19820 UCSC:uc009tzz.1 InParanoid:Q9CYY2 NextBio:297281
Bgee:Q9WTV7 CleanEx:MM_RNF12 Genevestigator:Q9WTV7
GermOnline:ENSMUSG00000056537 Uniprot:Q9WTV7
Length = 600
Score = 128 (50.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ L++
Sbjct: 545 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSS 593
>RGD|1559832 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0060816 "random inactivation of
X chromosome" evidence=ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1559832 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
eggNOG:COG5540 GO:GO:0004842 EMBL:CH473969 HOVERGEN:HBG009886
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
HOGENOM:HOG000273881 OMA:RNFGESD OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:BC097491 IPI:IPI00362010 RefSeq:NP_001020063.1
RefSeq:XP_003752129.1 UniGene:Rn.85539 Ensembl:ENSRNOT00000003782
GeneID:100910646 GeneID:317241 KEGG:rno:100910646 KEGG:rno:317241
UCSC:RGD:1559832 InParanoid:Q4V889 NextBio:671483
Genevestigator:Q4V889 Uniprot:Q4V889
Length = 603
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ L++
Sbjct: 548 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSS 596
>UNIPROTKB|E1BBM5 [details] [associations]
symbol:RNF167 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
OMA:DSWLTSW EMBL:DAAA02048752 IPI:IPI00728966
Ensembl:ENSBTAT00000006464 Uniprot:E1BBM5
Length = 295
Score = 123 (48.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICK 525
C IC ++Y D +K+ L C H YH+ C+ WL + CPICK
Sbjct: 176 CAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICK 218
>TAIR|locus:2056765 [details] [associations]
symbol:AT2G03000 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:AC004138 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 eggNOG:KOG0800 IPI:IPI00548277 PIR:B84443
RefSeq:NP_178400.1 UniGene:At.52609 ProteinModelPortal:O80614
SMR:O80614 EnsemblPlants:AT2G03000.1 GeneID:814829
KEGG:ath:AT2G03000 TAIR:At2g03000 InParanoid:O80614
Genevestigator:O80614 Uniprot:O80614
Length = 535
Score = 127 (49.8 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 480 EPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
E G C+IC E++ ++ L C H+YH EC++KWL I CP C+
Sbjct: 477 EKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCR 522
>TAIR|locus:2199272 [details] [associations]
symbol:AT1G68180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237766 EMBL:BT010696 EMBL:BT021133 EMBL:DQ086851
IPI:IPI00528273 RefSeq:NP_176985.2 UniGene:At.35560
ProteinModelPortal:Q6NPX0 SMR:Q6NPX0 EnsemblPlants:AT1G68180.1
GeneID:843146 KEGG:ath:AT1G68180 TAIR:At1g68180 eggNOG:NOG271210
InParanoid:Q6NPX0 OMA:HDELDIM PhylomeDB:Q6NPX0
ProtClustDB:CLSN2918429 Genevestigator:Q6NPX0 Uniprot:Q6NPX0
Length = 248
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
C IC+E++ E+ L C H YH+ C+ WL I N CPIC+ E
Sbjct: 138 CAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFE 181
>FB|FBgn0026878 [details] [associations]
symbol:CG4325 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0002805
"regulation of antimicrobial peptide biosynthetic process"
evidence=IMP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 EMBL:AE014298 GO:GO:0008270
EMBL:AL031765 ChiTaRS:Actn Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0002805 EMBL:BT132862 PIR:T13738 RefSeq:NP_569969.1
SMR:Q9XZS4 DIP:DIP-17855N IntAct:Q9XZS4 MINT:MINT-343565
EnsemblMetazoa:FBtr0070342 EnsemblMetazoa:FBtr0310443 GeneID:31167
KEGG:dme:Dmel_CG4325 UCSC:CG4325-RA FlyBase:FBgn0026878
InParanoid:Q9XZS4 OMA:CTICSER OrthoDB:EOG479CQF GenomeRNAi:31167
NextBio:772261 Uniprot:Q9XZS4
Length = 158
Score = 111 (44.1 bits), Expect = 0.00010, P = 0.00010
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALA 530
C IC E +R ++ I C H +H +CL W CPIC+S+ A
Sbjct: 8 CTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICRSQDAA 54
>ZFIN|ZDB-GENE-120215-234 [details] [associations]
symbol:si:ch211-155d24.7 "si:ch211-155d24.7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-120215-234 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BX005314
RefSeq:XP_690894.2 ProteinModelPortal:I3ISG0
Ensembl:ENSDART00000150920 GeneID:562414 KEGG:dre:562414
GeneTree:ENSGT00530000067036 Bgee:I3ISG0 Uniprot:I3ISG0
Length = 221
Score = 117 (46.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 484 CIICQEDYRDNEK-IGTLDCDHEYHAECLKKWLFIKNVCPIC 524
C+IC +D R I L C H +H+EC+++WL+ K CP C
Sbjct: 160 CLICHDDLRKGGGVIRELHCSHSFHSECIEEWLWTKQTCPTC 201
Score = 40 (19.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 5/25 (20%), Positives = 15/25 (60%)
Query: 5 NMPCTSQMIDLEMDQQNRGYLLPEP 29
++PC +Q+ + + + + ++P P
Sbjct: 63 SLPCPAQLKAMHLSRTHSAAVIPSP 87
>UNIPROTKB|G3MWN3 [details] [associations]
symbol:G3MWN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02001065
Ensembl:ENSBTAT00000064904 Uniprot:G3MWN3
Length = 136
Score = 103 (41.3 bits), Expect = 0.00010, P = 0.00010
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALATK 532
C +C D + I L C H YH +C+ +WL CP+C+ A A +
Sbjct: 82 CAVCLMDLVPGDLIRPLPCKHVYHLDCINQWLTRSFTCPLCRGPADAAQ 130
>RGD|2320624 [details] [associations]
symbol:LOC100364637 "ring finger protein 148-like" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 RGD:2320624 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 IPI:IPI00960085
Ensembl:ENSRNOT00000064228 Uniprot:F1M1T7
Length = 309
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 455 RQLKTRVYLSATNYINLE--EPASKDQEPG--SCIICQEDYRDNEKIGTLDCDHEYHAEC 510
RQ+K+ V A + L + K+ +P SC++C + Y+ + I L C H +H C
Sbjct: 230 RQIKSDVK-KAIGQLQLRVLKEGDKELDPNEDSCVVCFDIYKAQDVIRILTCKHFFHKTC 288
Query: 511 LKKWLFIKNVCPICKSEAL 529
+ WL CP+CK + L
Sbjct: 289 IDPWLLAHRTCPMCKCDIL 307
>ASPGD|ASPL0000072677 [details] [associations]
symbol:AN4637 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BN001303
eggNOG:COG5540 EMBL:AACD01000079 OrthoDB:EOG47M57Q
RefSeq:XP_662241.1 ProteinModelPortal:Q5B493
EnsemblFungi:CADANIAT00005795 GeneID:2872434 KEGG:ani:AN4637.2
HOGENOM:HOG000184502 OMA:TTRRRTC Uniprot:Q5B493
Length = 812
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 484 CIICQEDYRDNE-KIGTLDCDHEYHAECLKKWLFIKN-VCPICKSEALATKS 533
C++C E+Y D + ++ +L C HE+H EC+ WL + CPICK + + + S
Sbjct: 678 CVVCLEEYIDGQSRVMSLPCGHEFHVECITPWLTTRRRTCPICKGDVVRSMS 729
>TAIR|locus:1006230652 [details] [associations]
symbol:AT5G07225 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00525847
RefSeq:NP_974747.1 UniGene:At.51412 ProteinModelPortal:F4K6L4
SMR:F4K6L4 PRIDE:F4K6L4 EnsemblPlants:AT5G07225.1 GeneID:2745979
KEGG:ath:AT5G07225 OMA:TILPCTH PhylomeDB:F4K6L4 Uniprot:F4K6L4
Length = 234
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 430 SYEELLALGERIGNVNTGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQE 489
S +E++ E NT + E + Q+ L + +P+ +D+ C+IC
Sbjct: 144 SLDEIIERIEERERGNTSVGEGLTEGQISQ---LPTIKF----KPSLEDK---MCMICHS 193
Query: 490 DYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
DY +K+ L C H+YH +C+ WL +C +C+ E +
Sbjct: 194 DYVRGDKLTILPCTHKYHKDCISHWLQNSKLCCVCQREVI 233
>UNIPROTKB|A5D7H4 [details] [associations]
symbol:RNF6 "RNF6 protein" species:9913 "Bos taurus"
[GO:0085020 "protein K6-linked ubiquitination" evidence=IEA]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IEA]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0044314 "protein K27-linked ubiquitination"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0016605 "PML
body" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0030424
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
eggNOG:COG5540 GO:GO:0004842 GO:GO:0060765 GO:GO:0070936
GO:GO:0085020 GO:GO:0030517 GO:GO:0044314 HOVERGEN:HBG009886
GeneTree:ENSGT00700000104290 HOGENOM:HOG000273881 CTD:6049
OMA:TIRIPLR OrthoDB:EOG4N04DD EMBL:DAAA02033174 EMBL:BC140555
IPI:IPI00905825 RefSeq:NP_001091531.1 UniGene:Bt.13984
Ensembl:ENSBTAT00000047301 GeneID:527056 KEGG:bta:527056
InParanoid:A5D7H4 NextBio:20874504 Uniprot:A5D7H4
Length = 669
Score = 135 (52.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/70 (37%), Positives = 36/70 (51%)
Query: 463 LSATNYINLEEPASKDQEPG-SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVC 521
LS NY E + D EPG +C +C DY K+ L C HE+H C+ +WL C
Sbjct: 598 LSTRNY----EHSGADGEPGKACSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSENCTC 653
Query: 522 PICKSEALAT 531
P+C+ L +
Sbjct: 654 PVCRQPVLGS 663
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 256 GGSSWTQAPAIPYMHGSNVSG 276
GG+S + P P H SG
Sbjct: 239 GGASGSPGPGAPLTHLDTPSG 259
>UNIPROTKB|Q8WVZ7 [details] [associations]
symbol:RNF133 "E3 ubiquitin-protein ligase RNF133"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH471070 GO:GO:0051865
EMBL:CH236947 EMBL:AC006463 HOGENOM:HOG000231432 HOVERGEN:HBG057659
OrthoDB:EOG4JT06C EMBL:AF447589 EMBL:AK098524 EMBL:BC022038
IPI:IPI00549481 RefSeq:NP_631914.1 UniGene:Hs.126730
ProteinModelPortal:Q8WVZ7 SMR:Q8WVZ7 IntAct:Q8WVZ7
PhosphoSite:Q8WVZ7 DMDM:74730905 PRIDE:Q8WVZ7 DNASU:168433
Ensembl:ENST00000340112 GeneID:168433 KEGG:hsa:168433
UCSC:uc003vkj.1 CTD:168433 GeneCards:GC07M122337 HGNC:HGNC:21154
HPA:HPA014421 neXtProt:NX_Q8WVZ7 PharmGKB:PA134991267
eggNOG:NOG315052 InParanoid:Q8WVZ7 KO:K15702 OMA:NCIDPWI
PhylomeDB:Q8WVZ7 GenomeRNAi:168433 NextBio:88726 Bgee:Q8WVZ7
CleanEx:HS_RNF133 Genevestigator:Q8WVZ7 GermOnline:ENSG00000188050
Uniprot:Q8WVZ7
Length = 376
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
SC+IC E Y+ N+ + L C H +H C+ W+ CPICK + L
Sbjct: 255 SCVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICKCDIL 301
>UNIPROTKB|F6RQU6 [details] [associations]
symbol:RNF115 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0005829 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0051865
GeneTree:ENSGT00530000062967 OMA:STHFAEF EMBL:DAAA02007325
IPI:IPI00691430 Ensembl:ENSBTAT00000010691 Uniprot:F6RQU6
Length = 293
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C +C+EDY E++ L C+H +H+ C+ WL + + CP+C+
Sbjct: 217 CPVCKEDYTVEEEVRQLPCNHYFHSSCIVPWLELHDACPVCR 258
>FB|FBgn0037653 [details] [associations]
symbol:CG11982 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 eggNOG:NOG235630 KO:K11982
EMBL:AY052007 RefSeq:NP_649859.1 UniGene:Dm.4413 SMR:Q9VHI7
IntAct:Q9VHI7 MINT:MINT-313564 EnsemblMetazoa:FBtr0081965
GeneID:41080 KEGG:dme:Dmel_CG11982 UCSC:CG11982-RA
FlyBase:FBgn0037653 InParanoid:Q9VHI7 OMA:EILISVA OrthoDB:EOG4B8GVJ
GenomeRNAi:41080 NextBio:822051 Uniprot:Q9VHI7
Length = 380
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 469 INLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
IN EE K Q C IC +D++ +E + L C H YH C+ WL + + CPIC+ ++
Sbjct: 242 INAEEVNRKIQ----CSICWDDFKIDETVRKLPCSHLYHENCIVPWLNLHSTCPICR-KS 296
Query: 529 LA 530
LA
Sbjct: 297 LA 298
>TAIR|locus:2035843 [details] [associations]
symbol:AT1G14200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006457 "protein folding" evidence=RCA]
[GO:0009408 "response to heat" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042542 "response
to hydrogen peroxide" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:COG5540
EMBL:AC007576 ProtClustDB:CLSN2682926 EMBL:BT004591 EMBL:AK227511
IPI:IPI00533236 PIR:G86275 RefSeq:NP_172872.1 UniGene:At.41984
ProteinModelPortal:Q9XI67 SMR:Q9XI67 STRING:Q9XI67 DNASU:837980
EnsemblPlants:AT1G14200.1 GeneID:837980 KEGG:ath:AT1G14200
TAIR:At1g14200 HOGENOM:HOG000029104 InParanoid:Q9XI67 OMA:WIGFSIN
PhylomeDB:Q9XI67 Genevestigator:Q9XI67 Uniprot:Q9XI67
Length = 179
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 477 KDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
K++ GSC IC +++ + + C H++H++C+++WL CP+C+ E
Sbjct: 102 KEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCRYE 152
>TAIR|locus:1006230278 [details] [associations]
symbol:AT3G10815 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY139990
EMBL:BT002592 IPI:IPI00537743 RefSeq:NP_974274.1 UniGene:At.63149
ProteinModelPortal:Q8L729 SMR:Q8L729 PRIDE:Q8L729
EnsemblPlants:AT3G10815.1 GeneID:2745878 KEGG:ath:AT3G10815
TAIR:At3g10815 InParanoid:Q8L729 OMA:MESVWCH PhylomeDB:Q8L729
Genevestigator:Q8L729 Uniprot:Q8L729
Length = 199
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
C +CQ+ + + C H YH+EC+ WL +N CP+C+ E
Sbjct: 121 CPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKE 164
>TAIR|locus:2090980 [details] [associations]
symbol:AT3G14320 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB022220 IPI:IPI00542849
RefSeq:NP_188049.1 UniGene:At.65086 ProteinModelPortal:Q9LUL6
SMR:Q9LUL6 EnsemblPlants:AT3G14320.1 GeneID:820652
KEGG:ath:AT3G14320 TAIR:At3g14320 eggNOG:NOG324121
HOGENOM:HOG000034170 InParanoid:Q9LUL6 OMA:SNSTCPI PhylomeDB:Q9LUL6
ProtClustDB:CLSN2915567 Genevestigator:Q9LUL6 GermOnline:AT3G14320
Uniprot:Q9LUL6
Length = 204
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 484 CIICQEDYRDNEKIGTL-DCDHEYHAECLKKWLFIKNVCPICKSEALATKS 533
C++C + D +K L CDH +H EC+ WL + CPIC+ +S
Sbjct: 88 CVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQS 138
>UNIPROTKB|I3LDQ5 [details] [associations]
symbol:LOC100739432 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 KO:K11982 OMA:STHFAEF EMBL:CU606940
RefSeq:XP_003481520.1 Ensembl:ENSSSCT00000023878 GeneID:100739432
KEGG:ssc:100739432 Uniprot:I3LDQ5
Length = 293
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C +C+EDY E++ L C+H +H+ C+ WL + + CP+C+
Sbjct: 217 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDACPVCR 258
>TAIR|locus:2169063 [details] [associations]
symbol:AT5G47610 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025628 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:AK175469 EMBL:AK176643 EMBL:AY085503
IPI:IPI00529585 RefSeq:NP_199572.1 UniGene:At.29885
ProteinModelPortal:Q9FGJ6 SMR:Q9FGJ6 EnsemblPlants:AT5G47610.1
GeneID:834811 KEGG:ath:AT5G47610 TAIR:At5g47610 eggNOG:NOG304426
InParanoid:Q9FGJ6 OMA:VISALIC PhylomeDB:Q9FGJ6
ProtClustDB:CLSN2714317 Genevestigator:Q9FGJ6 GermOnline:AT5G47610
Uniprot:Q9FGJ6
Length = 166
Score = 112 (44.5 bits), Expect = 0.00016, P = 0.00016
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 484 CIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPICKSEALATKS 533
C IC ++ E I L+ C H +H +C+ KWL ++ CP C++ + S
Sbjct: 107 CAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSIFSQHS 157
>UNIPROTKB|Q641J8 [details] [associations]
symbol:rnf12-a "E3 ubiquitin-protein ligase RNF12-A"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0042787
GO:GO:0000578 EMBL:AB114039 EMBL:BC082339 RefSeq:NP_001082725.1
UniGene:Xl.11908 ProteinModelPortal:Q641J8 GeneID:398680
KEGG:xla:398680 CTD:398680 Xenbase:XB-GENE-866117
HOVERGEN:HBG009886 KO:K16271 Uniprot:Q641J8
Length = 622
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALATKS 533
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ L +
Sbjct: 567 TCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVASN 617
>UNIPROTKB|Q9Y4L5 [details] [associations]
symbol:RNF115 "E3 ubiquitin-protein ligase RNF115"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AL160282 GO:GO:0051865
EMBL:AL390725 EMBL:CH471244 EMBL:AF542552 EMBL:AF419857
EMBL:AK290749 EMBL:BC054049 EMBL:BC064903 EMBL:AL079314
IPI:IPI00337608 RefSeq:NP_055270.1 RefSeq:XP_003960213.1
UniGene:Hs.523550 ProteinModelPortal:Q9Y4L5 SMR:Q9Y4L5
IntAct:Q9Y4L5 STRING:Q9Y4L5 PhosphoSite:Q9Y4L5 DMDM:56405389
PRIDE:Q9Y4L5 DNASU:27246 Ensembl:ENST00000369291 GeneID:101060478
GeneID:27246 KEGG:hsa:101060478 KEGG:hsa:27246 UCSC:uc001eoj.3
CTD:27246 GeneCards:GC01P145611 HGNC:HGNC:18154 HPA:HPA019130
neXtProt:NX_Q9Y4L5 PharmGKB:PA162401519 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 InParanoid:Q9Y4L5 KO:K11982
OMA:STHFAEF OrthoDB:EOG4VX262 PhylomeDB:Q9Y4L5 ChiTaRS:RNF115
GenomeRNAi:27246 NextBio:50157 ArrayExpress:Q9Y4L5 Bgee:Q9Y4L5
CleanEx:HS_RNF115 Genevestigator:Q9Y4L5 GermOnline:ENSG00000121848
Uniprot:Q9Y4L5
Length = 304
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C +C+EDY E++ L C+H +H+ C+ WL + + CP+C+
Sbjct: 228 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 269
>TAIR|locus:2147152 [details] [associations]
symbol:AIP2 "ABI3-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0006865 "amino acid transport" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0009737
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009738
GO:GO:0046872 GO:GO:0008270 GO:GO:0009788 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AJ251087 EMBL:DQ059130 EMBL:AF296834
EMBL:AY081329 EMBL:BT000238 IPI:IPI00545960 RefSeq:NP_197591.1
UniGene:At.1134 UniGene:At.68499 HSSP:Q9LRB7
ProteinModelPortal:Q8RXD3 SMR:Q8RXD3 IntAct:Q8RXD3 STRING:Q8RXD3
PaxDb:Q8RXD3 PRIDE:Q8RXD3 EnsemblPlants:AT5G20910.1 GeneID:832215
KEGG:ath:AT5G20910 TAIR:At5g20910 eggNOG:COG5540
HOGENOM:HOG000243158 InParanoid:Q8RXD3 KO:K16274 OMA:MQELPCK
PhylomeDB:Q8RXD3 ProtClustDB:CLSN2687405 Genevestigator:Q8RXD3
GO:GO:0004842 Uniprot:Q8RXD3
Length = 310
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 23/56 (41%), Positives = 29/56 (51%)
Query: 472 EEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSE 527
EE K C IC+E+ +K+ L C H +H CLK WL N CPIC+ E
Sbjct: 218 EELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHE 273
>ZFIN|ZDB-GENE-061215-82 [details] [associations]
symbol:rnf115 "ring finger protein 115" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-061215-82 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:27246 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 OMA:STHFAEF
OrthoDB:EOG4VX262 EMBL:BX322530 EMBL:BC128879 IPI:IPI00803572
RefSeq:NP_001073542.1 UniGene:Dr.78061 SMR:A1A601
Ensembl:ENSDART00000090329 GeneID:790928 KEGG:dre:790928
InParanoid:A1A601 NextBio:20930412 Uniprot:A1A601
Length = 310
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C +C+EDY E + L C+H +H++C+ WL + + CP+C+
Sbjct: 238 CPVCKEDYTVGEPVRQLPCNHFFHSDCIVPWLELHDTCPVCR 279
>UNIPROTKB|Q07G42 [details] [associations]
symbol:rnf12 "E3 ubiquitin-protein ligase RNF12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000578 "embryonic
axis specification" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
KO:K16271 CTD:51132 HOGENOM:HOG000273881 EMBL:CR762181
RefSeq:NP_001016091.1 UniGene:Str.64802 ProteinModelPortal:Q07G42
STRING:Q07G42 GeneID:548845 KEGG:xtr:548845 Xenbase:XB-GENE-492020
Uniprot:Q07G42
Length = 639
Score = 126 (49.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ L
Sbjct: 584 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 630
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 257 GSSWTQAPAIPYMHGSNVSGAPMDSGNMVVQRYPETAGNRNSSTFLQPPVNI----QHLS 312
G S T + AI M ++G G + Y + + N+ T + PP + Q+L
Sbjct: 436 GLSETTSVAIQTMLRQIMTGF----GELSYFMYNDNDTDPNNPTPVSPPAAVPGEAQNLV 491
Query: 313 FPHPPPP 319
P PP P
Sbjct: 492 SPEPPAP 498
Score = 42 (19.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 132 YGRNSHFMDNVRGSYKRKNTE-----GFPGSFQNLNAPAXXXXXVAPLHPRHP 179
+G S+FM N + T PG QNL +P V P P P
Sbjct: 456 FGELSYFMYNDNDTDPNNPTPVSPPAAVPGEAQNLVSPEPPAPIVEPPEPVAP 508
>UNIPROTKB|F1SL40 [details] [associations]
symbol:DZIP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0019902 "phosphatase binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000209 OMA:RLCKYRD
GeneTree:ENSGT00530000063254 EMBL:CU915401
Ensembl:ENSSSCT00000013065 Uniprot:F1SL40
Length = 1019
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 461 VYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNV 520
V L N NL++ +++EP C+IC E+ + + L C H++H++C++ WL +
Sbjct: 940 VKLEGAN--NLDDDKEEEEEP--CVICHENLSP-DNLSVLPCAHKFHSQCIRPWLMQQGT 994
Query: 521 CPICKSEAL 529
CP C+ L
Sbjct: 995 CPTCRLHVL 1003
>TAIR|locus:2014726 [details] [associations]
symbol:AT1G35630 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0008233 KO:K15692 IPI:IPI00527054
RefSeq:NP_174800.2 UniGene:At.49941 ProteinModelPortal:F4HZZ5
SMR:F4HZZ5 PRIDE:F4HZZ5 EnsemblPlants:AT1G35630.1 GeneID:840463
KEGG:ath:AT1G35630 OMA:ICIDDYC Uniprot:F4HZZ5
Length = 318
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICK 525
+C IC +DY EK+ L C H+YHA C+ WL ++ CP+CK
Sbjct: 232 TCAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCK 275
>UNIPROTKB|E2QY59 [details] [associations]
symbol:RNF115 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:AAEX03011037
Ensembl:ENSCAFT00000017818 OMA:RTNERGH NextBio:20898321
Uniprot:E2QY59
Length = 319
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICK 525
C +C+EDY E++ L C+H +H+ C+ WL + + CP+C+
Sbjct: 244 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCR 285
>TAIR|locus:2139074 [details] [associations]
symbol:AT4G12210 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG282652 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000153211
ProtClustDB:CLSN2685557 IPI:IPI00546395 PIR:T48131
RefSeq:NP_192958.1 UniGene:At.64182 ProteinModelPortal:Q9STJ0
SMR:Q9STJ0 EnsemblPlants:AT4G12210.1 GeneID:826829
KEGG:ath:AT4G12210 TAIR:At4g12210 InParanoid:Q9STJ0 OMA:CTHIFHE
PhylomeDB:Q9STJ0 Genevestigator:Q9STJ0 Uniprot:Q9STJ0
Length = 203
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 469 INLEEPASKDQEPGSCIICQEDYRDNEK---IGTLDCDHEYHAECLKKWLFIKNVCPICK 525
I EE S E SC IC E+ K + + C H +H CL +W KN CP+C+
Sbjct: 138 IKAEELKSLKMETESCSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTCPLCR 197
Query: 526 SE 527
+E
Sbjct: 198 TE 199
>TAIR|locus:2201158 [details] [associations]
symbol:AT1G21960 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:COG5540 EMBL:AC013482 HOGENOM:HOG000152571 IPI:IPI00517609
RefSeq:NP_173615.1 UniGene:At.51714 ProteinModelPortal:Q9SFD9
SMR:Q9SFD9 EnsemblPlants:AT1G21960.1 GeneID:838799
KEGG:ath:AT1G21960 TAIR:At1g21960 InParanoid:Q9SFD9 OMA:FKICVSA
PhylomeDB:Q9SFD9 ProtClustDB:CLSN2914300 Genevestigator:Q9SFD9
Uniprot:Q9SFD9
Length = 204
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 451 EIVARQLKTRVYLSATNYINLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAEC 510
E++ K V A N ++ ++ D C IC E++ E + TL C HE+ C
Sbjct: 127 ELIRPANKLVVDRLARKVYNKKKKSNSDASV--CTICLEEFEKGEIVVTLPCGHEFDDGC 184
Query: 511 LKKWLFIKNVCPICKSE 527
+ KW +VCP+C+ E
Sbjct: 185 IGKWFLKDHVCPLCRFE 201
>MGI|MGI:1914139 [details] [associations]
symbol:Rnf128 "ring finger protein 128" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005770
"late endosome" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISA;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0042036 "negative regulation of
cytokine biosynthetic process" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1914139 Pfam:PF02225 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 GO:GO:0005794 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 GO:GO:0012505 GO:GO:0005770
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 CTD:79589 eggNOG:NOG271676 KO:K10629
OrthoDB:EOG4JT06C EMBL:AY112656 EMBL:AF426411 EMBL:AB041548
EMBL:AK004847 EMBL:AK008312 EMBL:AK018582 EMBL:AK146266
EMBL:AK167031 EMBL:BC010477 IPI:IPI00331363 RefSeq:NP_001241690.1
RefSeq:NP_075759.3 UniGene:Mm.27764 ProteinModelPortal:Q9D304
SMR:Q9D304 STRING:Q9D304 PhosphoSite:Q9D304 PRIDE:Q9D304
Ensembl:ENSMUST00000113026 GeneID:66889 KEGG:mmu:66889
InParanoid:Q9D304 NextBio:322937 Bgee:Q9D304 CleanEx:MM_RNF128
Genevestigator:Q9D304 GermOnline:ENSMUSG00000031438 Uniprot:Q9D304
Length = 428
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 455 RQLKTRVYLSATNYINLEEPASKDQEPG----SCIICQEDYRDNEKIGTLDCDHEYHAEC 510
RQLK A + L D+E G SC +C E Y+ N+ + L C+H +H C
Sbjct: 245 RQLKADAK-KAIGKLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTC 303
Query: 511 LKKWLFIKNVCPICKSEAL 529
+ WL CP+CK + L
Sbjct: 304 VDPWLLEHRTCPMCKCDIL 322
>UNIPROTKB|E1C2S8 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0044314 "protein K27-linked
ubiquitination" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IEA] [GO:0085020 "protein
K6-linked ubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0060765 GO:GO:0070936
GO:GO:0085020 GO:GO:0044314 GeneTree:ENSGT00700000104290
OMA:TIRIPLR EMBL:AADN02005166 IPI:IPI00592288
Ensembl:ENSGALT00000027631 Uniprot:E1C2S8
Length = 673
Score = 130 (50.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 463 LSATNY--INLEEPASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNV 520
LS NY I+ EE SK +C +C +Y K+ L C HE+H C+ +WL +
Sbjct: 602 LSTRNYGDIHTEEEISK-----TCSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENST 656
Query: 521 CPICKSEALATKS 533
CPIC+ L + +
Sbjct: 657 CPICRQPVLGSNA 669
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 108 VNHGSTDQLPSSRNFGVIGASAEEYGRNSHFMDNVRGSYKRKN 150
VN S SSRN V+ +E RN +D R Y R N
Sbjct: 514 VNDSSDPSEVSSRNGHVVEDDSE---RNGQSVDTQR--YARNN 551
Score = 37 (18.1 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 99 MPTLSSGMPVNHGSTDQLPSSR 120
MP LSS P + ++++ SSR
Sbjct: 353 MPQLSSAAPSSGLTSEEEESSR 374
>UNIPROTKB|F1RXM2 [details] [associations]
symbol:LOC100515872 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 KO:K10629 OMA:HEASSMA EMBL:CU638669
EMBL:CU914612 RefSeq:XP_003135339.3 Ensembl:ENSSSCT00000013723
GeneID:100515872 KEGG:ssc:100515872 Uniprot:F1RXM2
Length = 431
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 455 RQLKTRVYLSATNYINLEEPASKDQEPG----SCIICQEDYRDNEKIGTLDCDHEYHAEC 510
RQLK A + L D+E G SC +C E Y+ N+ + L C+H +H C
Sbjct: 248 RQLKADAK-KAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTC 306
Query: 511 LKKWLFIKNVCPICKSEAL 529
+ WL CP+CK + L
Sbjct: 307 VDPWLLEHRTCPMCKCDIL 325
>UNIPROTKB|E2RBV6 [details] [associations]
symbol:RNF215 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 EMBL:AAEX03014797
Ensembl:ENSCAFT00000020124 NextBio:20860142 Uniprot:E2RBV6
Length = 539
Score = 128 (50.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 451 EIVARQLKTRVYLSATNYINLEEPASKDQEPGS--CIICQEDYRDNEKIGTLDCDHEYHA 508
+++ ++ R+ T L A EPG+ C +C + + + + + L C HE+H
Sbjct: 452 DLLKHRVVRRLASLKTRRCRLGRAAQGPPEPGAETCAVCLDYFCNKQWLRVLPCKHEFHR 511
Query: 509 ECLKKWLFIKNVCPICKSEALATK 532
+C+ WL ++ CP+CK L +
Sbjct: 512 DCVDPWLMLQQTCPLCKFNVLGNR 535
Score = 42 (19.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 21/76 (27%), Positives = 27/76 (35%)
Query: 246 AGWLEQPSDGGGSSWTQAPAIPYMHGSNVSGAPMDSGNMVVQ--RYPETAGNRNSSTFLQ 303
AG E P G AP +P V P S + R+P R+ + +
Sbjct: 107 AGATEDPPPGAPPRPAPAPPLPAPRP--VRPRPRSSAPPSARDPRFPCLV--RSPAPAMG 162
Query: 304 PPVNIQHLSFPHPPPP 319
P S P PPPP
Sbjct: 163 PAARPAPRSPPPPPPP 178
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 353 DGSEMVPRHMGPVPPTGFRI 372
+G + P GP PP G R+
Sbjct: 237 EGVRIGPE-AGPAPPLGGRL 255
>UNIPROTKB|F1RRE9 [details] [associations]
symbol:RNF150 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 OMA:KFAAPTH EMBL:FP565236
Ensembl:ENSSSCT00000009917 Uniprot:F1RRE9
Length = 269
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 477 KDQEPG--SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
K+ EP +C +C E Y+ N+ + L C H +H C+ WL CP+CK L
Sbjct: 100 KETEPDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNIL 154
>TAIR|locus:2100021 [details] [associations]
symbol:SDIR1 "SALT- AND DROUGHT-INDUCED RING FINGER1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009789
"positive regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0006301 "postreplication
repair" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005783
GO:GO:0043231 GO:GO:0016021 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009789 GO:GO:0046872 GO:GO:0009651
GO:GO:0009414 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0031090 EMBL:AL132975
UniGene:At.28462 UniGene:At.48772 EMBL:AF386995 EMBL:BT006305
EMBL:AK317055 IPI:IPI00546001 PIR:T47692 RefSeq:NP_191112.1
ProteinModelPortal:Q9M2S6 SMR:Q9M2S6 STRING:Q9M2S6
EnsemblPlants:AT3G55530.1 GeneID:824718 KEGG:ath:AT3G55530
TAIR:At3g55530 eggNOG:NOG316504 HOGENOM:HOG000005982
InParanoid:Q9M2S6 KO:K16283 OMA:RAMRIHA PhylomeDB:Q9M2S6
ProtClustDB:CLSN2685302 Genevestigator:Q9M2S6 Uniprot:Q9M2S6
Length = 273
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 41/135 (30%), Positives = 61/135 (45%)
Query: 401 VALL--EIPDF-YEVGNFIDRHRDMRLDIEDMSYEELLALGE---RIGNVNTGLSEEIVA 454
+ALL E D YE +D + MS EE+ AL ++ + G S +A
Sbjct: 129 LALLDREFDDLDYETLRALDSDN---VSTTSMSEEEINALPVHKYKVLDPENGCS---LA 182
Query: 455 RQLKTRVYLSATNYINLEEPASKDQEPG-SCIICQEDYRDNEKIGTLDCDHEYHAECLKK 513
+Q T SA ++ + K E +C +C E E + TL C H++HA C+
Sbjct: 183 KQASTSS--SAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDP 240
Query: 514 WLFIKNVCPICKSEA 528
WL + CP+CK A
Sbjct: 241 WLRQQGTCPVCKFRA 255
>UNIPROTKB|Q8N7C7 [details] [associations]
symbol:RNF148 "RING finger protein 148" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9H0F5
HOGENOM:HOG000231432 HOVERGEN:HBG057659 EMBL:AL133414 CTD:378925
EMBL:AK098654 EMBL:BC029264 IPI:IPI00549513 RefSeq:NP_932351.1
UniGene:Hs.675191 ProteinModelPortal:Q8N7C7 SMR:Q8N7C7
PhosphoSite:Q8N7C7 DMDM:269849640 PRIDE:Q8N7C7
Ensembl:ENST00000434824 GeneID:378925 KEGG:hsa:378925
UCSC:uc003vkk.1 GeneCards:GC07M122341 HGNC:HGNC:22411 HPA:HPA045587
neXtProt:NX_Q8N7C7 PharmGKB:PA134918676 eggNOG:NOG254647
OMA:IDPWLLA OrthoDB:EOG4J9N0D GenomeRNAi:378925 NextBio:100862
ArrayExpress:Q8N7C7 Bgee:Q8N7C7 CleanEx:HS_RNF148
Genevestigator:Q8N7C7 Uniprot:Q8N7C7
Length = 305
Score = 122 (48.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 456 QLKTRVYLSATNYINLEEPASKDQE----PGSCIICQEDYRDNEKIGTLDCDHEYHAECL 511
Q+KT V A + + L D+E +C++C + Y+ + + L C H +H C+
Sbjct: 227 QIKTDVK-KAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACI 285
Query: 512 KKWLFIKNVCPICKSEALAT 531
WL CP+CK + L T
Sbjct: 286 DPWLLAHRTCPMCKCDILKT 305
Score = 38 (18.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 249 LEQPSDGGGSSWTQAPAIPYMHGSNVSGAPMDSG 282
L P G + WT I + G+ ++ +SG
Sbjct: 27 LSFPDSNGKAIWTAHLNITFQVGNEITSELGESG 60
>UNIPROTKB|Q8TEB7 [details] [associations]
symbol:RNF128 "E3 ubiquitin-protein ligase RNF128"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] [GO:0012505 "endomembrane
system" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137 EMBL:AF394689
Pfam:PF02225 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
GO:GO:0005794 GO:GO:0048471 GO:GO:0046872
Pathway_Interaction_DB:nfat_tfpathway GO:GO:0008270 GO:GO:0012505
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 HOGENOM:HOG000231432 HOVERGEN:HBG057659 CTD:79589
eggNOG:NOG271676 KO:K10629 EMBL:AK027169 EMBL:AK074264
EMBL:AK126553 EMBL:AL391315 EMBL:AL606833 EMBL:BC056677
EMBL:BC063404 IPI:IPI00152698 IPI:IPI00376602 RefSeq:NP_078815.3
RefSeq:NP_919445.1 UniGene:Hs.496542 PDB:3ICU PDBsum:3ICU
ProteinModelPortal:Q8TEB7 SMR:Q8TEB7 IntAct:Q8TEB7 STRING:Q8TEB7
PhosphoSite:Q8TEB7 DMDM:74751443 PRIDE:Q8TEB7 DNASU:79589
Ensembl:ENST00000255499 Ensembl:ENST00000324342 GeneID:79589
KEGG:hsa:79589 UCSC:uc004emk.3 UCSC:uc004eml.3
GeneCards:GC0XP105937 HGNC:HGNC:21153 HPA:HPA019675 MIM:300439
neXtProt:NX_Q8TEB7 PharmGKB:PA134868457 InParanoid:Q8TEB7
OMA:HEASSMA PhylomeDB:Q8TEB7 EvolutionaryTrace:Q8TEB7
GenomeRNAi:79589 NextBio:68594 ArrayExpress:Q8TEB7 Bgee:Q8TEB7
CleanEx:HS_RNF128 Genevestigator:Q8TEB7 Uniprot:Q8TEB7
Length = 428
Score = 123 (48.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 455 RQLKTRVYLSATNYINLEEPASKDQEPG----SCIICQEDYRDNEKIGTLDCDHEYHAEC 510
RQLK A + L D+E G SC +C E Y+ N+ + L C+H +H C
Sbjct: 245 RQLKADAK-KAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTC 303
Query: 511 LKKWLFIKNVCPICKSEAL 529
+ WL CP+CK + L
Sbjct: 304 VDPWLLEHRTCPMCKCDIL 322
Score = 42 (19.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 230 HNHFIQGNFIGQPFQPAGWLEQPSDGGGSSWTQAPAIPYMHGSNVSGA 277
H +F G Q WL GGG ++ + Y G+ SGA
Sbjct: 99 HTNFTVPTVWGSTVQ-VSWLALIQRGGGCTFADKIHLAYERGA--SGA 143
>RGD|1566282 [details] [associations]
symbol:Rnf128 "ring finger protein 128, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005770
"late endosome" evidence=IEA;ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0042036
"negative regulation of cytokine biosynthetic process"
evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 RGD:1566282 Pfam:PF02225
GO:GO:0005783 GO:GO:0005794 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 CTD:79589 eggNOG:NOG271676 KO:K10629
OrthoDB:EOG4JT06C OMA:HEASSMA EMBL:BC167061 IPI:IPI00955613
RefSeq:NP_001166820.1 UniGene:Rn.7002 Ensembl:ENSRNOT00000016100
GeneID:315911 KEGG:rno:315911 NextBio:670050 Genevestigator:B2RZ84
Uniprot:B2RZ84
Length = 428
Score = 123 (48.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 455 RQLKTRVYLSATNYINLEEPASKDQEPG----SCIICQEDYRDNEKIGTLDCDHEYHAEC 510
RQLK A + L D+E G SC +C E Y+ N+ + L C+H +H C
Sbjct: 245 RQLKADAK-KAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDVVRILTCNHIFHKTC 303
Query: 511 LKKWLFIKNVCPICKSEAL 529
+ WL CP+CK + L
Sbjct: 304 VDPWLLEHRTCPMCKCDIL 322
Score = 42 (19.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 230 HNHFIQGNFIGQPFQPAGWLEQPSDGGGSSWTQAPAIPYMHGSNVSGA 277
H +F G Q WL GGG ++ + Y G+ SGA
Sbjct: 99 HTNFTVPTVWGSTVQ-VSWLALIQRGGGCTFADKIHLAYERGA--SGA 143
>UNIPROTKB|Q7T037 [details] [associations]
symbol:rnf12-b "E3 ubiquitin-protein ligase RNF12-B"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
EMBL:AB114040 RefSeq:NP_001108244.1 UniGene:Xl.81512
ProteinModelPortal:Q7T037 GeneID:100137618 KEGG:xla:100137618
CTD:100137618 Xenbase:XB-GENE-6256130 Uniprot:Q7T037
Length = 757
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
+C +C +Y + K+ L C HEYH C+ +WL + CPIC+ L
Sbjct: 702 TCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 748
>TAIR|locus:2016044 [details] [associations]
symbol:AT1G71980 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0008233 HSSP:Q9LRB7
eggNOG:COG5540 OMA:DSWLTSW KO:K15692 HOGENOM:HOG000242534
EMBL:AY065385 EMBL:AY133843 IPI:IPI00547851 RefSeq:NP_177343.2
UniGene:At.16178 ProteinModelPortal:Q8VZ14 SMR:Q8VZ14 PRIDE:Q8VZ14
EnsemblPlants:AT1G71980.1 GeneID:843529 KEGG:ath:AT1G71980
TAIR:At1g71980 InParanoid:Q8VZ14 PhylomeDB:Q8VZ14
ProtClustDB:CLSN2718099 ArrayExpress:Q8VZ14 Genevestigator:Q8VZ14
Uniprot:Q8VZ14
Length = 448
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 483 SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFI-KNVCPICKSEA 528
+C IC EDY +K+ L C H++HA C+ WL + CP+CK +A
Sbjct: 231 TCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDA 277
>UNIPROTKB|F1S6C0 [details] [associations]
symbol:LOC100620409 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP016256 RefSeq:XP_003357420.1
RefSeq:XP_003357421.1 Ensembl:ENSSSCT00000016632
Ensembl:ENSSSCT00000026015 GeneID:100620318 GeneID:100620409
KEGG:ssc:100620318 KEGG:ssc:100620409 Uniprot:F1S6C0
Length = 141
Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 475 ASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEA 528
+ + E C IC D+ + I +L C H YH C+ +WL CP C+ A
Sbjct: 77 SQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPA 130
>WB|WBGene00007226 [details] [associations]
symbol:C01G6.4 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG265447 EMBL:Z35595 HOGENOM:HOG000007448 KO:K11980
GeneTree:ENSGT00700000104290 PIR:T18836 RefSeq:NP_495976.1
ProteinModelPortal:Q17573 SMR:Q17573 DIP:DIP-24608N
MINT:MINT-1046840 PaxDb:Q17573 EnsemblMetazoa:C01G6.4.1
EnsemblMetazoa:C01G6.4.2 GeneID:182077 KEGG:cel:CELE_C01G6.4
UCSC:C01G6.4 CTD:182077 WormBase:C01G6.4 InParanoid:Q17573
OMA:ECAICMI NextBio:916292 Uniprot:Q17573
Length = 170
Score = 111 (44.1 bits), Expect = 0.00027, P = 0.00027
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 478 DQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
D C IC D+ E+I L C H +H EC+ +WL CP C
Sbjct: 89 DMTSNECAICMIDFEPGERIRFLPCMHSFHQECVDEWLMKSFTCPSC 135
>UNIPROTKB|F1RFY0 [details] [associations]
symbol:RNF167 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045786 "negative regulation of cell cycle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209 GO:GO:0045786
GeneTree:ENSGT00700000104226 KO:K15706 OMA:DSWLTSW EMBL:FP015831
RefSeq:XP_003131954.1 UniGene:Ssc.20226 Ensembl:ENSSSCT00000019486
GeneID:100512310 KEGG:ssc:100512310 Uniprot:F1RFY0
Length = 350
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLF-IKNVCPICK 525
C IC ++Y D +++ L C H YH+ C+ WL + CPICK
Sbjct: 230 CAICLDEYEDGDRLRVLPCAHAYHSRCVDPWLTQTRKTCPICK 272
>UNIPROTKB|J9JHQ4 [details] [associations]
symbol:RNF150 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
EMBL:AAEX03011705 EMBL:AAEX03011706 EMBL:AAEX03011707
Ensembl:ENSCAFT00000043654 Uniprot:J9JHQ4
Length = 310
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 477 KDQEPG--SCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
K+ EP +C +C E Y+ N+ + L C H +H C+ WL CP+CK L
Sbjct: 178 KETEPDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNIL 232
>ZFIN|ZDB-GENE-060213-1 [details] [associations]
symbol:rnf150a "ring finger protein 150a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
ZFIN:ZDB-GENE-060213-1 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:NOG302028 GeneTree:ENSGT00700000104211
HOGENOM:HOG000231432 HOVERGEN:HBG057659 OrthoDB:EOG412M5G
EMBL:BX957281 IPI:IPI00638837 RefSeq:NP_001139044.1
UniGene:Dr.113703 ProteinModelPortal:B8A6H5
Ensembl:ENSDART00000035713 GeneID:559804 OMA:CAICIEN
NextBio:20883145 Bgee:B8A6H5 Uniprot:B8A6H5
Length = 418
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 478 DQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
D + +C +C EDY+ N+ + L C H +H C+ WL CP+CK L
Sbjct: 259 DSDFDNCAVCIEDYKPNDVVRILPCRHVFHRNCVDPWLQDHRTCPMCKMNIL 310
>UNIPROTKB|B4DDP0 [details] [associations]
symbol:RNF6 "cDNA FLJ53858, highly similar to RING finger
protein 6" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL138966
RefSeq:NP_898864.1 UniGene:Hs.136885 DNASU:6049 GeneID:6049
KEGG:hsa:6049 CTD:6049 HGNC:HGNC:10069 PharmGKB:PA34443
GenomeRNAi:6049 NextBio:23569 EMBL:AK293272 IPI:IPI01012568
ProteinModelPortal:B4DDP0 SMR:B4DDP0 STRING:B4DDP0
Ensembl:ENST00000399762 UCSC:uc010tdk.2 HOVERGEN:HBG102156
ArrayExpress:B4DDP0 Bgee:B4DDP0 Uniprot:B4DDP0
Length = 329
Score = 122 (48.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 473 EPASKDQEPGS-CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
E S D E G C +C DY K+ L C HE+H C+ +WL CPIC+ L +
Sbjct: 264 EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGS 323
Score = 38 (18.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 95 YVPYMPTLSSGMPV-NHGSTDQLPSSRNFGVIGASAEEYGRNSHFMDNVRGSYKR 148
++P M + S + N+ S + SS++ G S E +G N + R S R
Sbjct: 156 HLPDMHSELSNLGTDNNRSQHREGSSQDRQAQGDSTEMHGENETTQPHTRNSDSR 210
>ZFIN|ZDB-GENE-050913-69 [details] [associations]
symbol:rnf11b "ring finger protein 11b" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-050913-69
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG058444 EMBL:BC097155 IPI:IPI00897167 UniGene:Dr.106265
ProteinModelPortal:Q4V8X7 InParanoid:Q4V8X7 ArrayExpress:Q4V8X7
Uniprot:Q4V8X7
Length = 154
Score = 102 (41.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/81 (32%), Positives = 36/81 (44%)
Query: 446 TGLSEEIVARQLKTRVYLSATNYINLEEPASKDQEPG--SCIICQEDYRDNEKIGTLDCD 503
T L+EE R + R+ L + +P S E C+IC D+ + I L C
Sbjct: 60 TQLTEEEQVR-IAQRIGLIQHLPKGVYDPGSDGTEKKIRECVICMMDFVYGDPIRFLPCM 118
Query: 504 HEYHAECLKKWLFIKNVCPIC 524
H YH +C+ WL CP C
Sbjct: 119 HIYHLDCIDDWLMRSFTCPSC 139
Score = 39 (18.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 316 PPPPFQGIRNHNTNVHPQVAAA 337
PPPP+Q + H HP + A
Sbjct: 36 PPPPYQE-QIHVPVYHPTPSQA 56
>TAIR|locus:2039170 [details] [associations]
symbol:AT2G35910 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000237642
EMBL:AC007017 EMBL:AY090933 EMBL:AY122973 IPI:IPI00540918
PIR:E84774 RefSeq:NP_850254.1 UniGene:At.37613
ProteinModelPortal:Q8RX29 SMR:Q8RX29 EnsemblPlants:AT2G35910.1
GeneID:818164 KEGG:ath:AT2G35910 TAIR:At2g35910 eggNOG:NOG261083
InParanoid:Q8RX29 OMA:TASCCAI PhylomeDB:Q8RX29
ProtClustDB:CLSN2918183 Genevestigator:Q8RX29 GermOnline:AT2G35910
Uniprot:Q8RX29
Length = 217
Score = 114 (45.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 484 CIICQEDYRDNEKIGTL-DCDHEYHAECLKKWLFIKNVCPICKSEALAT 531
C IC DY+ + L DC+H +H +C+ WL + CP+C++ L T
Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLPT 195
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 5/10 (50%), Positives = 7/10 (70%)
Query: 77 HHHHAASVDL 86
HHHH +D+
Sbjct: 109 HHHHHVIIDV 118
>UNIPROTKB|F1MFA2 [details] [associations]
symbol:RNF11 "RING finger protein 11" species:9913 "Bos
taurus" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
IPI:IPI00693096 OMA:DPDQEPP GeneTree:ENSGT00700000104290
EMBL:DAAA02008904 Ensembl:ENSBTAT00000017277 Uniprot:F1MFA2
Length = 115
Score = 98 (39.6 bits), Expect = 0.00036, P = 0.00036
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
C+IC D+ + I L C H YH +C+ WL CP C
Sbjct: 60 CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 100
>UNIPROTKB|F1P8Z8 [details] [associations]
symbol:RNF11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151 GO:GO:0042787
OMA:DPDQEPP GeneTree:ENSGT00700000104290 EMBL:AAEX03009717
Ensembl:ENSCAFT00000006260 Uniprot:F1P8Z8
Length = 129
Score = 98 (39.6 bits), Expect = 0.00036, P = 0.00036
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPIC 524
C+IC D+ + I L C H YH +C+ WL CP C
Sbjct: 74 CVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSC 114
>UNIPROTKB|Q86Y13 [details] [associations]
symbol:DZIP3 "E3 ubiquitin-protein ligase DZIP3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0031593 "polyubiquitin binding"
evidence=IDA] [GO:0019902 "phosphatase binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 Reactome:REACT_6900 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031593 GO:GO:0004842 GO:GO:0000209 GO:GO:0019902
EMBL:AY227651 EMBL:AY227652 EMBL:AY227653 EMBL:AY227654
EMBL:AB014575 EMBL:AK023138 EMBL:BC039018 EMBL:BC056674
EMBL:BC063882 EMBL:AF279370 IPI:IPI00452463 IPI:IPI00945954
PIR:T00362 RefSeq:NP_055463.1 UniGene:Hs.409210
ProteinModelPortal:Q86Y13 SMR:Q86Y13 IntAct:Q86Y13
MINT:MINT-2867156 STRING:Q86Y13 PhosphoSite:Q86Y13 DMDM:50400482
PaxDb:Q86Y13 PRIDE:Q86Y13 DNASU:9666 Ensembl:ENST00000361582
Ensembl:ENST00000463306 Ensembl:ENST00000495008 GeneID:9666
KEGG:hsa:9666 UCSC:uc003dxd.3 CTD:9666 GeneCards:GC03P108308
HGNC:HGNC:30938 HPA:HPA035066 MIM:608672 neXtProt:NX_Q86Y13
PharmGKB:PA162384137 eggNOG:NOG126093 HOVERGEN:HBG051428
InParanoid:Q86Y13 KO:K10642 OMA:RLCKYRD OrthoDB:EOG4V1700
GenomeRNAi:9666 NextBio:36295 ArrayExpress:Q86Y13 Bgee:Q86Y13
Genevestigator:Q86Y13 GermOnline:ENSG00000198919 Uniprot:Q86Y13
Length = 1208
Score = 126 (49.4 bits), Expect = 0.00036, P = 0.00036
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 474 PASKDQEPGSCIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEAL 529
P +++E C+IC E+ E + L C H++HA+C++ WL + CP C+ L
Sbjct: 1138 PDEEEEEEEPCVICHENLSP-ENLSVLPCAHKFHAQCIRPWLMQQGTCPTCRLHVL 1192
>UNIPROTKB|Q29RU0 [details] [associations]
symbol:RNF128 "E3 ubiquitin-protein ligase RNF128"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0012505 "endomembrane system" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0048471 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0012505 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000231432
HOVERGEN:HBG057659 EMBL:BC114021 IPI:IPI00715186
RefSeq:NP_001069539.1 UniGene:Bt.29416 ProteinModelPortal:Q29RU0
PRIDE:Q29RU0 GeneID:535869 KEGG:bta:535869 CTD:79589
eggNOG:NOG271676 InParanoid:Q29RU0 KO:K10629 OrthoDB:EOG4JT06C
NextBio:20876846 Uniprot:Q29RU0
Length = 431
Score = 126 (49.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 27/79 (34%), Positives = 38/79 (48%)
Query: 455 RQLKTRVYLSATNYINLEEPASKDQEPG----SCIICQEDYRDNEKIGTLDCDHEYHAEC 510
RQLK A + L D+E G SC +C E Y+ N+ + L C+H +H C
Sbjct: 248 RQLKADAK-KAIGRLQLRTQKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHVFHKTC 306
Query: 511 LKKWLFIKNVCPICKSEAL 529
+ WL CP+CK + L
Sbjct: 307 VDPWLLEHRTCPMCKCDIL 325
Score = 37 (18.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 234 IQGNFIGQPFQPAGWLEQPSDGGGSSWTQAPAIPYMHGSNVSGA 277
+ G++ G Q WL GGG ++ + Y G+ SGA
Sbjct: 107 VPGDW-GSSVQ-VSWLALIQRGGGCTFADKIHLAYERGA--SGA 146
>TAIR|locus:2140069 [details] [associations]
symbol:AT4G40070 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161596 eggNOG:COG5540 EMBL:AL035708 HOGENOM:HOG000239182
EMBL:AF419600 EMBL:BT000540 IPI:IPI00542846 PIR:H85474 PIR:T06113
RefSeq:NP_568080.2 UniGene:At.27385 ProteinModelPortal:Q8W571
SMR:Q8W571 PRIDE:Q8W571 EnsemblPlants:AT4G40070.1 GeneID:830170
KEGG:ath:AT4G40070 TAIR:At4g40070 OMA:CRSGEES PhylomeDB:Q8W571
ProtClustDB:CLSN2918858 Genevestigator:Q8W571 GermOnline:AT4G40070
Uniprot:Q8W571
Length = 323
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 468 YINLEEP--ASKDQEPGSCIICQEDYRDNEKIGTLD-CDHEYHAECLKKWLFIKNVCPIC 524
Y +++E SKD E C IC + D+E + L C+H +H +C+ WL+ CP+C
Sbjct: 109 YSSVKESKIGSKDLE---CAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVC 165
Query: 525 KSEALATKS 533
+S L KS
Sbjct: 166 RSN-LTAKS 173
>UNIPROTKB|I3LA46 [details] [associations]
symbol:I3LA46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 Ensembl:ENSSSCT00000026758 OMA:ITILMIF
Uniprot:I3LA46
Length = 218
Score = 114 (45.2 bits), Expect = 0.00043, P = 0.00043
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 484 CIICQEDYRDNEKIGTLDCDHEYHAECLKKWLFIKNVCPICKSEALATK 532
C IC E Y D E++ + C H +H +C+ WL + CP C+ + K
Sbjct: 102 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQK 150
WARNING: HSPs involving 24 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 533 528 0.00091 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 274
No. of states in DFA: 621 (66 KB)
Total size of DFA: 327 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.97u 0.16s 50.13t Elapsed: 00:00:03
Total cpu time: 49.99u 0.16s 50.15t Elapsed: 00:00:03
Start: Fri May 10 04:29:28 2013 End: Fri May 10 04:29:31 2013
WARNINGS ISSUED: 2