Your job contains 1 sequence.
>009502
MDVTSSGAEVVPEKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFR
TPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN
LFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFN
SEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDM
DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK
NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEGKVNEEKKINEV
KPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKF
TEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEE
GKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009502
(533 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081561 - symbol:AT3G11950 "AT3G11950" species... 1131 1.0e-114 1
UNIPROTKB|E1C2K2 - symbol:TRAF5 "Uncharacterized protein"... 170 8.3e-10 1
UNIPROTKB|Q805B1 - symbol:TRAF-5 "Uncharacterized protein... 170 2.0e-09 1
DICTYBASE|DDB_G0274265 - symbol:DDB_G0274265 species:4468... 166 6.2e-09 1
UNIPROTKB|E2RR95 - symbol:TRAF5 "Uncharacterized protein"... 157 5.4e-08 1
UNIPROTKB|J9P706 - symbol:TRAF5 "Uncharacterized protein"... 157 5.4e-08 1
UNIPROTKB|I3L7X2 - symbol:TRAF5 "Uncharacterized protein"... 156 6.9e-08 1
UNIPROTKB|Q5LKH1 - symbol:Q5LKH1 "Putative uncharacterize... 156 8.6e-08 1
TIGR_CMR|SPO_A0410 - symbol:SPO_A0410 "hypothetical prote... 156 8.6e-08 1
UNIPROTKB|A7YWC7 - symbol:TRAF5 "Uncharacterized protein"... 155 8.9e-08 1
UNIPROTKB|O00463 - symbol:TRAF5 "TNF receptor-associated ... 154 1.1e-07 1
WB|WBGene00013762 - symbol:Y113G7B.12 species:6239 "Caeno... 157 1.2e-07 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 155 3.8e-07 1
DICTYBASE|DDB_G0272454 - symbol:DDB_G0272454 "TNF recepto... 152 6.8e-07 2
DICTYBASE|DDB_G0277243 - symbol:DDB_G0277243 "TRAF-type z... 145 6.9e-07 1
DICTYBASE|DDB_G0290931 - symbol:DDB_G0290931 "TRAF-type z... 142 2.0e-06 1
MGI|MGI:107548 - symbol:Traf5 "TNF receptor-associated fa... 142 2.4e-06 1
DICTYBASE|DDB_G0272098 - symbol:DDB_G0272098 "TNF recepto... 104 3.4e-06 2
UNIPROTKB|K7ER49 - symbol:TRAF4 "TNF receptor-associated ... 116 4.1e-06 1
UNIPROTKB|P82970 - symbol:HMGN5 "High mobility group nucl... 134 4.7e-06 1
WB|WBGene00006612 - symbol:trf-1 species:6239 "Caenorhabd... 138 4.8e-06 1
FB|FBgn0026319 - symbol:Traf4 "TNF-receptor-associated fa... 139 5.0e-06 1
ZFIN|ZDB-GENE-040308-1 - symbol:traf4a "tnf receptor-asso... 136 8.1e-06 1
TAIR|locus:2027513 - symbol:AT1G56660 "AT1G56660" species... 136 9.6e-06 1
GENEDB_PFALCIPARUM|PFB0710c - symbol:PFB0710c "hypothetic... 134 1.0e-05 1
UNIPROTKB|O96235 - symbol:PFB0710c "Conserved Plasmodium ... 134 1.0e-05 1
TAIR|locus:504955937 - symbol:AT2G22795 "AT2G22795" speci... 137 1.2e-05 1
DICTYBASE|DDB_G0290961 - symbol:zfaA "TRAF-type zinc fing... 134 1.3e-05 1
GENEDB_PFALCIPARUM|PF10_0278 - symbol:PF10_0278 "BRIX dom... 134 1.4e-05 1
UNIPROTKB|Q8IJC0 - symbol:PF10_0278 "Nucleolar preribosom... 134 1.4e-05 1
DICTYBASE|DDB_G0293202 - symbol:DDB_G0293202 "TRAF-type z... 133 1.5e-05 1
DICTYBASE|DDB_G0290685 - symbol:DDB_G0290685 "unknown" sp... 137 2.0e-05 1
DICTYBASE|DDB_G0273505 - symbol:DDB_G0273505 species:4468... 131 2.3e-05 1
DICTYBASE|DDB_G0273435 - symbol:DDB_G0273435 species:4468... 131 2.3e-05 1
DICTYBASE|DDB_G0288285 - symbol:mybX "myb domain-containi... 138 2.5e-05 1
UNIPROTKB|C9JJ10 - symbol:TRAF4 "TNF receptor-associated ... 120 2.9e-05 1
UNIPROTKB|Q6DJN2 - symbol:traf6-b "TNF receptor-associate... 137 3.0e-05 2
UNIPROTKB|F1PMX5 - symbol:CYLC2 "Uncharacterized protein"... 129 3.6e-05 1
UNIPROTKB|F1RNA8 - symbol:TRAF4 "Uncharacterized protein"... 132 3.6e-05 2
GENEDB_PFALCIPARUM|PFB0680w - symbol:PFB0680w "hypothetic... 138 3.7e-05 2
UNIPROTKB|O96229 - symbol:RON6 "Rhoptry neck protein 6" s... 138 3.7e-05 2
UNIPROTKB|J9JIG0 - symbol:TRAF4 "TNF receptor-associated ... 107 3.8e-05 1
UNIPROTKB|K7GKZ2 - symbol:TRAF4 "Uncharacterized protein"... 125 4.2e-05 1
DICTYBASE|DDB_G0290883 - symbol:DDB_G0290883 "TRAF-type z... 129 4.6e-05 1
GENEDB_PFALCIPARUM|PFD0950w - symbol:PFD0950w "ran bindin... 125 4.8e-05 1
UNIPROTKB|Q76NN6 - symbol:PFD0950w "Ran binding protein 1... 125 4.8e-05 1
UNIPROTKB|J9NUC9 - symbol:HMGN5 "Uncharacterized protein"... 125 5.1e-05 1
UNIPROTKB|F6RJL7 - symbol:TRAF4 "Uncharacterized protein"... 132 5.1e-05 2
GENEDB_PFALCIPARUM|PF11_0477 - symbol:PF11_0477 "CCAAT-bo... 124 5.6e-05 2
ZFIN|ZDB-GENE-030131-5735 - symbol:traf6 "TNF receptor-as... 129 6.0e-05 1
DICTYBASE|DDB_G0289935 - symbol:gtf3C5 "transcription fac... 131 6.8e-05 1
UNIPROTKB|F6SA91 - symbol:TRAF4 "TNF receptor-associated ... 127 7.0e-05 1
UNIPROTKB|J9NVS6 - symbol:CYLC2 "Uncharacterized protein"... 127 7.2e-05 1
DICTYBASE|DDB_G0274351 - symbol:DDB_G0274351 "5'-3' exonu... 128 7.2e-05 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 133 7.4e-05 1
UNIPROTKB|Q5JSK9 - symbol:HMGN5 "High mobility group nucl... 119 7.5e-05 1
UNIPROTKB|F1S2U3 - symbol:F1S2U3 "Uncharacterized protein... 127 7.7e-05 1
UNIPROTKB|E2RG86 - symbol:TRAF3 "Uncharacterized protein"... 128 8.2e-05 1
UNIPROTKB|F1SSA8 - symbol:CYLC2 "Uncharacterized protein"... 125 8.5e-05 1
TAIR|locus:2098443 - symbol:AT3G28770 "AT3G28770" species... 134 8.9e-05 1
UNIPROTKB|K7GN38 - symbol:TRAF5 "Uncharacterized protein"... 120 0.00010 1
ZFIN|ZDB-GENE-040305-2 - symbol:traf4b "tnf receptor-asso... 126 0.00010 1
MGI|MGI:1202880 - symbol:Traf4 "TNF receptor associated f... 129 0.00011 2
RGD|1306708 - symbol:Traf4 "Tnf receptor associated facto... 129 0.00011 2
DICTYBASE|DDB_G0267436 - symbol:abcF4 "putative non-trans... 130 0.00012 1
TAIR|locus:2133847 - symbol:AT4G26630 species:3702 "Arabi... 128 0.00012 1
UNIPROTKB|E2QYH9 - symbol:TRAF4 "Uncharacterized protein"... 128 0.00013 2
GENEDB_PFALCIPARUM|PF14_0736 - symbol:PF14_0736 "hypothet... 128 0.00016 1
UNIPROTKB|Q8IK70 - symbol:PF14_0736 "Putative uncharacter... 128 0.00016 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 124 0.00018 1
UNIPROTKB|Q9BUZ4 - symbol:TRAF4 "TNF receptor-associated ... 127 0.00018 2
DICTYBASE|DDB_G0268444 - symbol:DDB_G0268444 "TRAF-type z... 124 0.00019 1
RGD|1306536 - symbol:Rrbp1 "ribosome binding protein 1" s... 129 0.00019 1
UNIPROTKB|E1BX70 - symbol:RNF151 "Uncharacterized protein... 118 0.00021 1
DICTYBASE|DDB_G0289337 - symbol:DDB_G0289337 species:4468... 129 0.00022 1
UNIPROTKB|Q28092 - symbol:CYLC2 "Cylicin-2" species:9913 ... 123 0.00023 1
DICTYBASE|DDB_G0267744 - symbol:DDB_G0267744 species:4468... 122 0.00024 1
DICTYBASE|DDB_G0294611 - symbol:DDB_G0294611 "unknown" sp... 124 0.00025 1
UNIPROTKB|G3N370 - symbol:HTATSF1 "Uncharacterized protei... 125 0.00026 1
ZFIN|ZDB-GENE-030131-6117 - symbol:dido1 "death inducer-o... 130 0.00026 2
UNIPROTKB|F1MI94 - symbol:F1MI94 "Uncharacterized protein... 121 0.00027 1
MGI|MGI:1355295 - symbol:Hmgn5 "high-mobility group nucle... 121 0.00028 1
UNIPROTKB|F1SA11 - symbol:LOC100156979 "Uncharacterized p... 123 0.00029 1
UNIPROTKB|F1S2U2 - symbol:F1S2U2 "Uncharacterized protein... 121 0.00034 1
UNIPROTKB|E2RDE8 - symbol:TRAF6 "Uncharacterized protein"... 122 0.00036 1
UNIPROTKB|E1BBH2 - symbol:TRAF3 "Uncharacterized protein"... 122 0.00037 1
DICTYBASE|DDB_G0284321 - symbol:DDB_G0284321 "putative po... 124 0.00040 1
CGD|CAL0003910 - symbol:orf19.1374 species:5476 "Candida ... 112 0.00042 1
UNIPROTKB|Q59YF2 - symbol:CaO19.1374 "Putative uncharacte... 112 0.00042 1
GENEDB_PFALCIPARUM|PF10_0115 - symbol:PF10_0115 "QF122 an... 125 0.00042 1
UNIPROTKB|Q8IJS7 - symbol:PF10_0115 "QF122 antigen" speci... 125 0.00042 1
UNIPROTKB|I3LC61 - symbol:CYLC2 "Uncharacterized protein"... 119 0.00044 1
DICTYBASE|DDB_G0289557 - symbol:DDB_G0289557 "peptidase C... 123 0.00044 1
UNIPROTKB|E2QW67 - symbol:TSPYL2 "Uncharacterized protein... 121 0.00049 2
TAIR|locus:2170563 - symbol:AT5G40340 "AT5G40340" species... 129 0.00050 2
ZFIN|ZDB-GENE-070103-4 - symbol:nefmb "neurofilament, med... 122 0.00051 1
DICTYBASE|DDB_G0289719 - symbol:DDB_G0289719 "SFRS2-inter... 125 0.00055 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 130 0.00055 2
UNIPROTKB|E1C626 - symbol:TRAF6 "Uncharacterized protein"... 120 0.00058 1
ZFIN|ZDB-GENE-070705-81 - symbol:epb41a "erythrocyte memb... 119 0.00060 1
WARNING: Descriptions of 12 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2081561 [details] [associations]
symbol:AT3G11950 "AT3G11950" species:3702 "Arabidopsis
thaliana" [GO:0004659 "prenyltransferase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0016117
"carotenoid biosynthetic process" evidence=RCA] InterPro:IPR001293
InterPro:IPR008974 PROSITE:PS50145 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AP002040 GO:GO:0016740
GO:GO:0008270 GO:GO:0009941 SUPFAM:SSF49599 EMBL:AC016795
eggNOG:NOG280540 KO:K12501 EMBL:AK226618 IPI:IPI00522112
RefSeq:NP_001189865.1 RefSeq:NP_187801.3 UniGene:At.21802
ProteinModelPortal:Q9SF04 SMR:Q9SF04 STRING:Q9SF04 PaxDb:Q9SF04
PRIDE:Q9SF04 EnsemblPlants:AT3G11950.1 EnsemblPlants:AT3G11950.2
GeneID:820368 KEGG:ath:AT3G11950 TAIR:At3g11950
HOGENOM:HOG000239238 InParanoid:Q9SF04 OMA:RIVMETE PhylomeDB:Q9SF04
ProtClustDB:CLSN2920262 Genevestigator:Q9SF04 Uniprot:Q9SF04
Length = 572
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 238/509 (46%), Positives = 319/509 (62%)
Query: 13 EKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTE 72
E IED+K+GG +FHC+L DT++VHKIAQ FLPGLA+ACVDNTTGDIFR+PGSVA IR E
Sbjct: 9 ESIEDQKEGGPSFHCDLYDTQVVHKIAQVFLPGLATACVDNTTGDIFRSPGSVAADIRKE 68
Query: 73 MVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSE 132
M+EYLT+RSETFVAE ++L+ + E S P+DIISDF+D+FA SKRNLFSRVSGWM SE
Sbjct: 69 MIEYLTRRSETFVAEHIVLQGGSEIEASHDPFDIISDFIDDFATSKRNLFSRVSGWMLSE 128
Query: 133 KREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHC 192
+RED IDDF QEMEISGFW + RE IA LLKNVDFK+ HC MKF +E EL EH ++C
Sbjct: 129 RREDNIDDFAQEMEISGFWLTDHREGIAQTLLKNVDFKSSAHCEMKFQTEGELAEHAMNC 188
Query: 193 GFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKL 252
G+ +M C NEGC A F A +E HDSVCPFKIIPCEQ C +++MRRDMDRHCITVC MKL
Sbjct: 189 GYRTMNCENEGCTAVFCANQMENHDSVCPFKIIPCEQNCSESIMRRDMDRHCITVCPMKL 248
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFD 312
NCPF++VGC S + QC +QQH D++ SHL+YIL+ ++++ L LK R E++++
Sbjct: 249 VNCPFHSVGCLSDVHQCEVQQHHLDNVSSHLMYILRSIYKEASLDDLKPRAEQIQQ-LST 307
Query: 313 KLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSXXXXXXXXXXXXXXXPDGEGTINGEV 372
+L+EA + RSL+ +K+++ KLGP + P+ N E
Sbjct: 308 RLSEARNARSLTNLVKEIDGKLGPLE----------IKPKIVTDSESDKPE-----NTEK 352
Query: 373 NISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGD-VKEG--KFTEGKNNGRK 429
EE +I + + + ++ + E + K+ D VKE K +E +
Sbjct: 353 KALEEAEIKEKPETSNLKAVTLEQTAREAPEDKLVSKEVDAAMVKEAAKKVSEAEI-ADN 411
Query: 430 VSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEG--KANDTG 487
V+EE + ++ + I G N+ ++E + P V E EE + DT
Sbjct: 412 VNEEGELKAQKLLEIGEFIKEGDNNSADDLSERTETKAPEVVVMDEAREEEDSVETKDT- 470
Query: 488 KVNKEVRASE---GRKVSEE-RNINEGKT 512
+ + +R E + EE + E KT
Sbjct: 471 RTYETIRGLEIEANEMIDEETKKSTETKT 499
>UNIPROTKB|E1C2K2 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR027130
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Prosite:PS00518
GO:GO:0005813 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
EMBL:AADN02012068 IPI:IPI00683517 Ensembl:ENSGALT00000031926
ArrayExpress:E1C2K2 Uniprot:E1C2K2
Length = 366
Score = 170 (64.9 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 47/186 (25%), Positives = 91/186 (48%)
Query: 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHML-HCGFISMICPNEGCNAKFSAGHLE 214
+E + L ++V N+ C+ K+L +H+ HC F +C + CN +++
Sbjct: 125 QEHLQQCLFESVQCTNDGCCDQILR--KDLKDHLSQHCKFREEMC--QYCNKYVVLINIK 180
Query: 215 KHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
H+ + CP +PC Q C ++++++++H TVC +CP+ GC + + + +
Sbjct: 181 NHEENDCPDYPMPCLQNCSQIILKKEIEKHH-TVCPETEVDCPYKQYGCLIKVKRGKLAE 239
Query: 274 HRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAK 333
H + L H+L IL K R L+ ++ +L KS K + ++ L+ A+K E +
Sbjct: 240 HENGALREHMLQILDKNSR------LEEQISDLYKSLECKEIK---IQQLAEAVKKCEKE 290
Query: 334 LGPFKE 339
F +
Sbjct: 291 FRQFTQ 296
>UNIPROTKB|Q805B1 [details] [associations]
symbol:TRAF-5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027130
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005813 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359 eggNOG:NOG239194
HOGENOM:HOG000231557 CTD:7188 KO:K09849 OMA:IDKSAWL
OrthoDB:EOG4JWVD2 PANTHER:PTHR10131:SF23 HSSP:Q13114
EMBL:AADN02012068 EMBL:AB100868 EMBL:AJ720372 IPI:IPI00579684
RefSeq:NP_989550.1 UniGene:Gga.5127 SMR:Q805B1 STRING:Q805B1
Ensembl:ENSGALT00000016038 GeneID:374055 KEGG:gga:374055
InParanoid:Q805B1 NextBio:20813577 Uniprot:Q805B1
Length = 557
Score = 170 (64.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 47/186 (25%), Positives = 91/186 (48%)
Query: 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHML-HCGFISMICPNEGCNAKFSAGHLE 214
+E + L ++V N+ C+ K+L +H+ HC F +C + CN +++
Sbjct: 125 QEHLQQCLFESVQCTNDGCCDQILR--KDLKDHLSQHCKFREEMC--QYCNKYVVLINIK 180
Query: 215 KHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
H+ + CP +PC Q C ++++++++H TVC +CP+ GC + + + +
Sbjct: 181 NHEENDCPDYPMPCLQNCSQIILKKEIEKHH-TVCPETEVDCPYKQYGCLIKVKRGKLAE 239
Query: 274 HRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAK 333
H + L H+L IL K R L+ ++ +L KS K + ++ L+ A+K E +
Sbjct: 240 HENGALREHMLQILDKNSR------LEEQISDLYKSLECKEIK---IQQLAEAVKKCEKE 290
Query: 334 LGPFKE 339
F +
Sbjct: 291 FRQFTQ 296
>DICTYBASE|DDB_G0274265 [details] [associations]
symbol:DDB_G0274265 species:44689 "Dictyostelium
discoideum" [GO:0005615 "extracellular space" evidence=IDA]
dictyBase:DDB_G0274265 GO:GO:0005615 EMBL:AAFI02000012
RefSeq:XP_644022.1 ProteinModelPortal:Q86AU2 PRIDE:Q86AU2
EnsemblProtists:DDB0167801 GeneID:8619452 KEGG:ddi:DDB_G0274265
OMA:ENSKSEC Uniprot:Q86AU2
Length = 600
Score = 166 (63.5 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 35/156 (22%), Positives = 87/156 (55%)
Query: 371 EVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKV 430
E+ +++E + N + EK + +N+ K E + N QE + + + K + +N ++
Sbjct: 116 EMELNQENQENNQENNQEKNQENNQEKNQENNQENNQENNQENKNNQSKIQQEQNEKQEQ 175
Query: 431 SEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVN 490
+E+ ++++Q VN + ++N + +NE+Q+ NE +V + ++V+E+ + N+ ++N
Sbjct: 176 NEKQEVNEKQEVNEKQ-----EVNEKQELNEKQEVNEKQEVNEKQEVNEKQEQNEKQEIN 230
Query: 491 KEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAE 526
+E ++S+++N + K N ++E++N +
Sbjct: 231 QE-------QLSQQKNEQQEKLNQQNNQQQEELNKQ 259
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 41/161 (25%), Positives = 85/161 (52%)
Query: 371 EVNISEEGK-INATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRK 429
E N+ +E K I AT + E N+ E + N QEK+ + + ++ + +NN
Sbjct: 96 ENNLDKEIKQIEATHNFQDLEMELNQEN-QENNQENNQEKNQENNQEKNQENNQENNQEN 154
Query: 430 VSE----EDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKAND 485
E + +I EQN +E N + VNE+Q+ NE +V + ++++E+ + N+
Sbjct: 155 NQENKNNQSKIQQEQNEKQEQ-------NEKQEVNEKQEVNEKQEVNEKQELNEKQEVNE 207
Query: 486 TGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAE 526
+VN++ +E ++ +E++ IN+ + + + ++EK+N +
Sbjct: 208 KQEVNEKQEVNEKQEQNEKQEINQEQLSQQKNEQQEKLNQQ 248
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/149 (25%), Positives = 86/149 (57%)
Query: 387 NEKEKISNKSKPNEG-GKGNEQEKDSDGDVKEGKFTEG-KNNGRKVSEEDRIHDEQN--- 441
N + I NK K NEG NEQE + D ++K+ + T ++ ++++E++ ++++N
Sbjct: 75 NPEWSIVNK-KWNEGYNYENEQENNLDKEIKQIEATHNFQDLEMELNQENQENNQENNQE 133
Query: 442 VNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKV 501
N+E + + NN+ E + N+ + ++ +E+ + N+ +VN++ +E ++V
Sbjct: 134 KNQENNQEKNQENNQENNQENNQENKNNQSKIQQEQNEKQEQNEKQEVNEKQEVNEKQEV 193
Query: 502 SEERNINEGKTNGVRVNEEEKINAEGKVN 530
+E++ +NE + VNE++++N + +VN
Sbjct: 194 NEKQELNEKQ----EVNEKQEVNEKQEVN 218
>UNIPROTKB|E2RR95 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
EMBL:AAEX03005087 EMBL:AAEX03005088 Ensembl:ENSCAFT00000019248
Uniprot:E2RR95
Length = 557
Score = 157 (60.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 213 LEKHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMI 271
L+ H+ ++CP +PC KC + R ++D H +TVC +CPF GC + +
Sbjct: 179 LQNHEENLCPEYPVPCPNKCSQIIPRTEVDEH-LTVCPEAEQDCPFKHYGCTVKDKRGSL 237
Query: 272 QQHRHDDLCSHLLYILQK-LHRDKPLKVLKNRVEELEKSYFDKLAE 316
Q+H H L H+L +L+K L ++ + L +E+ E S +LAE
Sbjct: 238 QEHEHSALRDHMLLVLEKNLQLEEQISDLYKSLEQKE-SKIQQLAE 282
>UNIPROTKB|J9P706 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 OMA:IDKSAWL PANTHER:PTHR10131:SF23
EMBL:AAEX03005087 EMBL:AAEX03005088 Ensembl:ENSCAFT00000043751
Uniprot:J9P706
Length = 559
Score = 157 (60.3 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 36/113 (31%), Positives = 59/113 (52%)
Query: 205 NAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQS 264
+ +F + H E ++CP +PC KC + R ++D H +TVC +CPF GC
Sbjct: 177 SVRFDSNHEE---NLCPEYPVPCPNKCSQIIPRTEVDEH-LTVCPEAEQDCPFKHYGCTV 232
Query: 265 TIPQCMIQQHRHDDLCSHLLYILQK-LHRDKPLKVLKNRVEELEKSYFDKLAE 316
+ +Q+H H L H+L +L+K L ++ + L +E+ E S +LAE
Sbjct: 233 KDKRGSLQEHEHSALRDHMLLVLEKNLQLEEQISDLYKSLEQKE-SKIQQLAE 284
>UNIPROTKB|I3L7X2 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 CTD:7188 KO:K09849 OMA:IDKSAWL
PANTHER:PTHR10131:SF23 EMBL:AEMK01103347 EMBL:CU915362
EMBL:FP565698 RefSeq:XP_003482803.1 UniGene:Ssc.41249
Ensembl:ENSSSCT00000022338 GeneID:396616 KEGG:ssc:396616
Uniprot:I3L7X2
Length = 558
Score = 156 (60.0 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 41/137 (29%), Positives = 66/137 (48%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH +C F C C +L+ H+ ++CP + C KC + R ++
Sbjct: 151 KDLKEHASTYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVSCPNKCLQMIPRTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK-LHRDKPLKVL 299
D H + VC +CPF GC + +Q+H H L H+L +L+K L ++ + L
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCMVKEKRGHLQEHEHSALRDHMLLVLEKNLQLEEQISDL 267
Query: 300 KNRVEELEKSYFDKLAE 316
+E+ E S +LAE
Sbjct: 268 YKSLEQKE-SKIQQLAE 283
Score = 120 (47.3 bits), Expect = 0.00060, P = 0.00060
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 197 MICPNE-GCNAKFSAGHLEKHDSVCPFKIIPC-EQKCPDTLMRRDMDRHCITVCQMKLAN 254
+ C N GC AK G + H C F+ + C ++C + ++R+D+ H T CQ +
Sbjct: 108 VFCKNAPGCTAKIILGRYQDHLQQCLFQAVQCCNERCREPVLRKDLKEHASTYCQFREEK 167
Query: 255 CPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 168 CLY----CKKDVVVINLQNHE-ENLC 188
>UNIPROTKB|Q5LKH1 [details] [associations]
symbol:Q5LKH1 "Putative uncharacterized protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008160 Pfam:PF01391 EMBL:CP000032
GenomeReviews:CP000032_GR RefSeq:YP_165237.1 GeneID:3196697
KEGG:sil:SPOA0410 PATRIC:23382176 OMA:NEGNEGD Uniprot:Q5LKH1
Length = 642
Score = 156 (60.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 55/170 (32%), Positives = 81/170 (47%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKIS--NKS-KPNEGGKGNEQEKDSDG-DVKEGKF 420
EG E+N +EG N D+ NE + + N+ + NEG +GNE + ++G + EG
Sbjct: 348 EGDEGDELNDGDEG--NEGDEGNEGNEANEGNEGDEDNEGNEGNEGNEGNEGNEANEGNE 405
Query: 421 TEGKNNGRKVSE--EDRIHDEQNVNREGTI-DGGKINNE-TRVNEEQKANEPGKVTKGEK 476
+ N G + E ED +E N EG D G NE NE + NE G +G++
Sbjct: 406 GDEDNEGNEEDEGNEDNEGNEGNEGSEGNEGDEGDEGNEGNEGNESNEGNEGGLNDEGDE 465
Query: 477 VSE--EGKANDTGKVNKEVRASEGRKVSEERNINEGKTN--GVRVNEEEK 522
E EG ND G N E EG + +E +EG + G NE+++
Sbjct: 466 GDENDEGNENDEGDENNE--GDEGNEDNEGNEEDEGNEDDEGDEDNEDDE 513
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
D + T G + ++EG N D+ +E ++ + +EG +G+E + +GD EG +
Sbjct: 298 DEDDTFGGLLEEADEG--NEGDEGDEDDEGDEDDEGDEGDEGDESQNGDEGD--EGDEGD 353
Query: 423 GKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
N+G + +E D +E N EG +G + N NE + NE + +G + E+ +
Sbjct: 354 ELNDGDEGNEGDE-GNEGNEANEGN-EGDEDNEGNEGNEGNEGNEGNEANEGNEGDEDNE 411
Query: 483 ANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNG 531
N+ + N++ +EG + SE +EG G NE + N EG G
Sbjct: 412 GNEEDEGNEDNEGNEGNEGSEGNEGDEGD-EGNEGNEGNESN-EGNEGG 458
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGK 424
EG E + +EG + D+ +E ++ +EG +G+E ++ +DGD EG +
Sbjct: 312 EGNEGDEGDEDDEG--DEDDEGDEGDEGDESQNGDEGDEGDEGDELNDGD--EGNEGDEG 367
Query: 425 NNGRKVSEEDRIHDEQNVNREGTI--DGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
N G + +E + DE N EG +G + N NE + NE + +G + +E +
Sbjct: 368 NEGNEANEGNE-GDEDNEGNEGNEGNEGNEGNEANEGNEGDEDNEGNEEDEGNEDNEGNE 426
Query: 483 ANDTGKVNKEVRASEGRKVSEERNINEGKTNGVR-VNEEEKINAEGKVN 530
N+ + N+ EG + +E NEG G+ +E N EG N
Sbjct: 427 GNEGSEGNEGDEGDEGNEGNEGNESNEGNEGGLNDEGDEGDENDEGNEN 475
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 42/165 (25%), Positives = 72/165 (43%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEK--EKISNKSKPNEGGKGNEQEK-DSDGDVKEGK 419
D +G G ++EG D ++ + + NEG +G+E ++ D D + EG
Sbjct: 276 DEDGEFFGRGQEADEGDEGDEDDEDDTFGGLLEEADEGNEGDEGDEDDEGDEDDEGDEGD 335
Query: 420 FTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSE 479
+ NG + E D DE N EG +G + N NE + +E + +G + +E
Sbjct: 336 EGDESQNGDEGDEGDE-GDELNDGDEGN-EGDEGNEGNEANEGNEGDEDNEGNEGNEGNE 393
Query: 480 EGKANDTGKVNKEVRASEGRKVSEERNINEGK--TNGVRVNEEEK 522
+ N+ + N+ +EG + E NEG G NE ++
Sbjct: 394 GNEGNEANEGNEGDEDNEGNEEDEGNEDNEGNEGNEGSEGNEGDE 438
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 49/179 (27%), Positives = 79/179 (44%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGD----VKEG-K 419
EG E N +EG IN + +E + + + +EG +GNE +++ +GD EG +
Sbjct: 212 EGNEGDEGNEGDEGLINIGLEGDEGNEGNEGDENDEGNEGNENDENDEGDENNEADEGNE 271
Query: 420 FTEGKNNGR---KVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEK 476
F EG +G + E D DE + + E GG + NE + +E + G++
Sbjct: 272 FDEGDEDGEFFGRGQEADE-GDEGDEDDEDDTFGGLLEEADEGNEGDEGDEDDE---GDE 327
Query: 477 VSEEGKANDTGKVNKEVRASEGRKVSEERNINEGK--TNGVRVNEEEKINAEGKVNGRD 533
+EG D G ++ EG + E +N+G G NE + N EG D
Sbjct: 328 -DDEGDEGDEG--DESQNGDEGDEGDEGDELNDGDEGNEGDEGNEGNEAN-EGNEGDED 382
Score = 122 (48.0 bits), Expect = 0.00044, P = 0.00044
Identities = 48/173 (27%), Positives = 79/173 (45%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
D EG E N EG N ++ +E + + NEG +GNE + ++G + + + E
Sbjct: 409 DNEGNEEDEGNEDNEG--NEGNEGSEGNEGDEGDEGNEGNEGNESNEGNEGGLND-EGDE 465
Query: 423 GKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
G N +E D DE N EG D + N E NE+ + +E + +G++ +EG
Sbjct: 466 GDENDEG-NENDE-GDENNEGDEGNEDN-EGNEEDEGNEDDEGDEDNEDDEGDE-DDEGD 521
Query: 483 ANDTGKVNKEV----RASEGRKVSEERNINEGKTNG-VRVNEEEKINAEGKVN 530
+D G + E R EG + E+ +EG + +++E EG N
Sbjct: 522 EDDEGDESLEPDHPSRHDEGDEGDED---DEGDEDADALLDDEGDEGDEGDEN 571
>TIGR_CMR|SPO_A0410 [details] [associations]
symbol:SPO_A0410 "hypothetical protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR008160
Pfam:PF01391 EMBL:CP000032 GenomeReviews:CP000032_GR
RefSeq:YP_165237.1 GeneID:3196697 KEGG:sil:SPOA0410 PATRIC:23382176
OMA:NEGNEGD Uniprot:Q5LKH1
Length = 642
Score = 156 (60.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 55/170 (32%), Positives = 81/170 (47%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKIS--NKS-KPNEGGKGNEQEKDSDG-DVKEGKF 420
EG E+N +EG N D+ NE + + N+ + NEG +GNE + ++G + EG
Sbjct: 348 EGDEGDELNDGDEG--NEGDEGNEGNEANEGNEGDEDNEGNEGNEGNEGNEGNEANEGNE 405
Query: 421 TEGKNNGRKVSE--EDRIHDEQNVNREGTI-DGGKINNE-TRVNEEQKANEPGKVTKGEK 476
+ N G + E ED +E N EG D G NE NE + NE G +G++
Sbjct: 406 GDEDNEGNEEDEGNEDNEGNEGNEGSEGNEGDEGDEGNEGNEGNESNEGNEGGLNDEGDE 465
Query: 477 VSE--EGKANDTGKVNKEVRASEGRKVSEERNINEGKTN--GVRVNEEEK 522
E EG ND G N E EG + +E +EG + G NE+++
Sbjct: 466 GDENDEGNENDEGDENNE--GDEGNEDNEGNEEDEGNEDDEGDEDNEDDE 513
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
D + T G + ++EG N D+ +E ++ + +EG +G+E + +GD EG +
Sbjct: 298 DEDDTFGGLLEEADEG--NEGDEGDEDDEGDEDDEGDEGDEGDESQNGDEGD--EGDEGD 353
Query: 423 GKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
N+G + +E D +E N EG +G + N NE + NE + +G + E+ +
Sbjct: 354 ELNDGDEGNEGDE-GNEGNEANEGN-EGDEDNEGNEGNEGNEGNEGNEANEGNEGDEDNE 411
Query: 483 ANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNG 531
N+ + N++ +EG + SE +EG G NE + N EG G
Sbjct: 412 GNEEDEGNEDNEGNEGNEGSEGNEGDEGD-EGNEGNEGNESN-EGNEGG 458
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGK 424
EG E + +EG + D+ +E ++ +EG +G+E ++ +DGD EG +
Sbjct: 312 EGNEGDEGDEDDEG--DEDDEGDEGDEGDESQNGDEGDEGDEGDELNDGD--EGNEGDEG 367
Query: 425 NNGRKVSEEDRIHDEQNVNREGTI--DGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
N G + +E + DE N EG +G + N NE + NE + +G + +E +
Sbjct: 368 NEGNEANEGNE-GDEDNEGNEGNEGNEGNEGNEANEGNEGDEDNEGNEEDEGNEDNEGNE 426
Query: 483 ANDTGKVNKEVRASEGRKVSEERNINEGKTNGVR-VNEEEKINAEGKVN 530
N+ + N+ EG + +E NEG G+ +E N EG N
Sbjct: 427 GNEGSEGNEGDEGDEGNEGNEGNESNEGNEGGLNDEGDEGDENDEGNEN 475
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 42/165 (25%), Positives = 72/165 (43%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEK--EKISNKSKPNEGGKGNEQEK-DSDGDVKEGK 419
D +G G ++EG D ++ + + NEG +G+E ++ D D + EG
Sbjct: 276 DEDGEFFGRGQEADEGDEGDEDDEDDTFGGLLEEADEGNEGDEGDEDDEGDEDDEGDEGD 335
Query: 420 FTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSE 479
+ NG + E D DE N EG +G + N NE + +E + +G + +E
Sbjct: 336 EGDESQNGDEGDEGDE-GDELNDGDEGN-EGDEGNEGNEANEGNEGDEDNEGNEGNEGNE 393
Query: 480 EGKANDTGKVNKEVRASEGRKVSEERNINEGK--TNGVRVNEEEK 522
+ N+ + N+ +EG + E NEG G NE ++
Sbjct: 394 GNEGNEANEGNEGDEDNEGNEEDEGNEDNEGNEGNEGSEGNEGDE 438
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 49/179 (27%), Positives = 79/179 (44%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGD----VKEG-K 419
EG E N +EG IN + +E + + + +EG +GNE +++ +GD EG +
Sbjct: 212 EGNEGDEGNEGDEGLINIGLEGDEGNEGNEGDENDEGNEGNENDENDEGDENNEADEGNE 271
Query: 420 FTEGKNNGR---KVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEK 476
F EG +G + E D DE + + E GG + NE + +E + G++
Sbjct: 272 FDEGDEDGEFFGRGQEADE-GDEGDEDDEDDTFGGLLEEADEGNEGDEGDEDDE---GDE 327
Query: 477 VSEEGKANDTGKVNKEVRASEGRKVSEERNINEGK--TNGVRVNEEEKINAEGKVNGRD 533
+EG D G ++ EG + E +N+G G NE + N EG D
Sbjct: 328 -DDEGDEGDEG--DESQNGDEGDEGDEGDELNDGDEGNEGDEGNEGNEAN-EGNEGDED 382
Score = 122 (48.0 bits), Expect = 0.00044, P = 0.00044
Identities = 48/173 (27%), Positives = 79/173 (45%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
D EG E N EG N ++ +E + + NEG +GNE + ++G + + + E
Sbjct: 409 DNEGNEEDEGNEDNEG--NEGNEGSEGNEGDEGDEGNEGNEGNESNEGNEGGLND-EGDE 465
Query: 423 GKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
G N +E D DE N EG D + N E NE+ + +E + +G++ +EG
Sbjct: 466 GDENDEG-NENDE-GDENNEGDEGNEDN-EGNEEDEGNEDDEGDEDNEDDEGDE-DDEGD 521
Query: 483 ANDTGKVNKEV----RASEGRKVSEERNINEGKTNG-VRVNEEEKINAEGKVN 530
+D G + E R EG + E+ +EG + +++E EG N
Sbjct: 522 EDDEGDESLEPDHPSRHDEGDEGDED---DEGDEDADALLDDEGDEGDEGDEN 571
>UNIPROTKB|A7YWC7 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005813 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359
eggNOG:NOG239194 HOGENOM:HOG000231557 CTD:7188 KO:K09849
OMA:IDKSAWL OrthoDB:EOG4JWVD2 PANTHER:PTHR10131:SF23
EMBL:DAAA02043784 EMBL:DAAA02043785 EMBL:BC134494 IPI:IPI00685963
RefSeq:NP_001098810.1 UniGene:Bt.8981 SMR:A7YWC7 STRING:A7YWC7
Ensembl:ENSBTAT00000015940 GeneID:507234 KEGG:bta:507234
InParanoid:A7YWC7 NextBio:20867969 Uniprot:A7YWC7
Length = 558
Score = 155 (59.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 45/164 (27%), Positives = 76/164 (46%)
Query: 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHM-LHCGFISMICPNEGCNAKFSAGHLE 214
++ + H L + V NE +C K+L EH+ +C F C C +L+
Sbjct: 126 QDHLQHCLFQPVQCSNE-NCREPV-LRKDLKEHLSAYCQFREEKCLY--CKKDVVVINLQ 181
Query: 215 KHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
H+ ++CP + C KC T+ R ++D H + VC +C F GC + +Q+
Sbjct: 182 NHEENLCPDYPVSCPNKCLQTIPRTEVDEH-LAVCPEAEQDCAFKNYGCAVKDKRGNLQE 240
Query: 274 HRHDDLCSHLLYILQK-LHRDKPLKVLKNRVEELEKSYFDKLAE 316
H L H+L +L+K ++ + L +E+ E S +LAE
Sbjct: 241 HERSALRDHMLLVLEKNFQLEEQISDLYKSLEQKE-SKIQQLAE 283
>UNIPROTKB|O00463 [details] [associations]
symbol:TRAF5 "TNF receptor-associated factor 5"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0031996 "thioesterase binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0009898 "internal
side of plasma membrane" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0035631 "CD40 receptor complex" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0005813 GO:GO:0006915 GO:GO:0007165
EMBL:CH471100 GO:GO:0042981 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907 SUPFAM:SSF49599
GO:GO:0035631 Gene3D:3.90.890.10 EMBL:AL590101 HOVERGEN:HBG058222
eggNOG:NOG239194 EMBL:AB000509 EMBL:CR536557 EMBL:BC029600
EMBL:U69108 IPI:IPI00005760 PIR:JC6539 RefSeq:NP_001029082.1
RefSeq:NP_004610.1 RefSeq:NP_665702.1 UniGene:Hs.523930
ProteinModelPortal:O00463 SMR:O00463 IntAct:O00463 STRING:O00463
PhosphoSite:O00463 PaxDb:O00463 PRIDE:O00463 DNASU:7188
Ensembl:ENST00000261464 Ensembl:ENST00000336184
Ensembl:ENST00000367004 GeneID:7188 KEGG:hsa:7188 UCSC:uc001hih.3
CTD:7188 GeneCards:GC01P211499 HGNC:HGNC:12035 HPA:CAB010277
HPA:HPA008052 MIM:602356 neXtProt:NX_O00463 PharmGKB:PA36712
InParanoid:O00463 KO:K09849 OMA:IDKSAWL OrthoDB:EOG4JWVD2
PhylomeDB:O00463 ChiTaRS:TRAF5 GenomeRNAi:7188 NextBio:28184
ArrayExpress:O00463 Bgee:O00463 CleanEx:HS_TRAF5
Genevestigator:O00463 GermOnline:ENSG00000082512
PANTHER:PTHR10131:SF23 Uniprot:O00463
Length = 557
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 48/186 (25%), Positives = 84/186 (45%)
Query: 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHM-LHCGFISMICPNEGCNAKFSAGHLE 214
++ + L + V NE C K+L EH+ C F C C +L+
Sbjct: 126 QDHLQQCLFQPVQCSNE-KCREPV-LRKDLKEHLSASCQFRKEKCLY--CKKDVVVINLQ 181
Query: 215 KHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
H+ ++CP + C C +++ ++D H + VC +CPF GC T + +QQ
Sbjct: 182 NHEENLCPEYPVFCPNNCAKIILKTEVDEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQQ 240
Query: 274 HRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAK 333
H H L H+ +L+K + L+ ++ +L KS K ++ ++ L+ IK LE +
Sbjct: 241 HEHSALREHMRLVLEKNVQ------LEEQISDLHKSLEQKESK---IQQLAETIKKLEKE 291
Query: 334 LGPFKE 339
F +
Sbjct: 292 FKQFAQ 297
Score = 119 (46.9 bits), Expect = 0.00076, P = 0.00076
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 199 CPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKLANCP 256
C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ + C
Sbjct: 110 CSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCL 169
Query: 257 FYAVGCQSTIPQCMIQQHRHDDLC 280
+ C+ + +Q H ++LC
Sbjct: 170 Y----CKKDVVVINLQNHE-ENLC 188
>WB|WBGene00013762 [details] [associations]
symbol:Y113G7B.12 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003964 "RNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006278 "RNA-dependent
DNA replication" evidence=IEA] InterPro:IPR000477 Pfam:PF00078
Pfam:PF03372 GO:GO:0003723 GO:GO:0003964 GO:GO:0006278
InterPro:IPR005135 SUPFAM:SSF56219 EMBL:AL110477
GeneTree:ENSGT00690000102370 RefSeq:NP_507901.2
ProteinModelPortal:Q9NAL5 EnsemblMetazoa:Y113G7B.12 GeneID:190975
KEGG:cel:CELE_Y113G7B.12 UCSC:Y113G7B.12 CTD:190975
WormBase:Y113G7B.12 eggNOG:NOG314477 InParanoid:Q9NAL5 OMA:DNGEERG
NextBio:947550 Uniprot:Q9NAL5
Length = 988
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 49/174 (28%), Positives = 85/174 (48%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
+GE + NGE + +EE N + N +E+ + ++ N G + + E +G+ + + E
Sbjct: 132 NGEASDNGEESDNEEASDNGEESDNGEERGNGEASDN-GDESDNGEASDNGEESDNE--E 188
Query: 423 GKNNGRKVSE-EDRIHDEQNVNREGTIDGGKINN-ETRVNEEQKANEPGKVTKGEKVSEE 480
+NG + E+ + E+ N E + +G + +N E N E+ NE GE+ S+
Sbjct: 189 ASDNGEESDNGEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEAS-DNGEE-SDN 246
Query: 481 GKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRV-NEEEKINAEGKVNGRD 533
G+A+D G+ + AS+ EE + E NG N EE+ N E NG +
Sbjct: 247 GEASDNGEESDNEEASDN---GEESDNGEASDNGEESDNGEERDNGEASDNGEE 297
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/173 (26%), Positives = 85/173 (49%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
+GE + NGE S+ G+ + ++ ++ + S+ + ++ + ++ ++SD + G E
Sbjct: 108 NGEASDNGEE--SDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGN-GE 164
Query: 423 GKNNGRKVSEEDRIHD--EQNVNREGTIDGGKINN-ETRVNEEQKANEPGKVTKGEKVSE 479
+NG + S+ D E++ N E + +G + +N E N E++ N G+ + S+
Sbjct: 165 ASDNGDE-SDNGEASDNGEESDNEEASDNGEESDNGEESDNGEERGN--GEASDNGDESD 221
Query: 480 EGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRV-NEEEKINAEGKVNG 531
G+A+D G+ + AS+ EE + E NG NEE N E NG
Sbjct: 222 NGEASDNGEESDNEEASDN---GEESDNGEASDNGEESDNEEASDNGEESDNG 271
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 155 (59.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 371 EVNISE-EGKINATDKVN---EKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNN 426
E N SE EG+ + +K E+EK+S + + G +E+D +G+ KEGK +
Sbjct: 1307 EENSSEDEGEESVREKEEQEVEEEKLSEEGSERQEGDEQIEEEDEEGE-KEGKMKSSEVK 1365
Query: 427 GRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQ---KANEPGKVTKGEKVSEEGKA 483
R+ +D ++E+N + + ++ET EE+ K E + GE+ EE +
Sbjct: 1366 FREAETDDEENNEENTEDKSGSGEEEDDDETEKQEERHGRKDRETEEEEGGEEEEEEAEQ 1425
Query: 484 NDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEK 522
DT + +E +A E + EE N GKT EEE+
Sbjct: 1426 KDTSE--EEEQAEESEEEEEETEQNSGKTRETSEEEEEQ 1462
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 377 EGKINATDKVNEKE-KISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDR 435
E +I +K + +E + SN+ +P E + + K+ D +EG+ E N + EED
Sbjct: 1211 ERQIEDEEKTDAEEGESSNEGEP-ERSESEDVSKNDRSDEEEGESEE--NGSEREEEEDV 1267
Query: 436 IHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRA 495
+ EQ + G D + N E EE + E + E++ EE + D G+ + VR
Sbjct: 1268 LEGEQEESEVGNED--EENQEEE--EENQTKEEEEEENNEEMKEENSSEDEGE--ESVRE 1321
Query: 496 SEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGR 532
E ++V EE+ EG + E+ + EG+ G+
Sbjct: 1322 KEEQEVEEEKLSEEGSERQEGDEQIEEEDEEGEKEGK 1358
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 41/158 (25%), Positives = 76/158 (48%)
Query: 375 SEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVS-EE 433
SEE + + E+E N K E + E++++++ + +E + E K ++ S EE
Sbjct: 1429 SEEEEQAEESEEEEEETEQNSGKTRETSEEEEEQQENEEEEEEEEEAEWKEKKQRESNEE 1488
Query: 434 DRIHDEQNVNREG----TIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKV 489
+ E+ EG ++ K N++ R N++++ E +GE+ EEG+ +
Sbjct: 1489 EEEEGEEEKEEEGEQKENVEKDKQNSKLRENKDEEEEEE---EEGEEEEEEGEEEENEPK 1545
Query: 490 NKEVRAS-EGRKVSEERNINEGKTNGVRVNEEEKINAE 526
NK ++ +GRK +R I E + NEEE+ E
Sbjct: 1546 NKNIKTGKDGRK---QRTITEEEEEEEEGNEEEEEEEE 1580
Score = 124 (48.7 bits), Expect = 0.00086, P = 0.00085
Identities = 39/158 (24%), Positives = 79/158 (50%)
Query: 375 SEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEED 434
SEE + T++ + K + +++ + + E+E++ + + KE K E + EE+
Sbjct: 1438 SEEEE-EETEQNSGKTRETSEEEEEQQENEEEEEEEEEAEWKEKKQRESNEEEEEEGEEE 1496
Query: 435 RIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVR 494
+ +E+ +E ++ K N++ R N++++ E +GE+ EEG+ + NK ++
Sbjct: 1497 K--EEEGEQKEN-VEKDKQNSKLRENKDEEEEEE---EEGEEEEEEGEEEENEPKNKNIK 1550
Query: 495 AS-EGRK---VSEERNINEGKTNGVRVNEEEKINAEGK 528
+GRK ++EE E + N EEE+ E K
Sbjct: 1551 TGKDGRKQRTITEEEE-EEEEGNEEEEEEEEETKREKK 1587
Score = 124 (48.7 bits), Expect = 0.00086, P = 0.00085
Identities = 45/176 (25%), Positives = 73/176 (41%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKF-T 421
+GE + GE SE ++ D+ +E+E +S+ N G + E+E +G+ +E +
Sbjct: 1224 EGESSNEGEPERSESEDVSKNDRSDEEE---GESEEN-GSEREEEEDVLEGEQEESEVGN 1279
Query: 422 EGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEG 481
E + N + E +E+ N E + +E EE + + + EK+SEEG
Sbjct: 1280 EDEENQEEEEENQTKEEEEEENNEEMKEENSSEDE---GEESVREKEEQEVEEEKLSEEG 1336
Query: 482 KANDTGKVNKEVRASEGRKV----SEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
G E EG K S E E +T+ NEE + G D
Sbjct: 1337 SERQEGDEQIEEEDEEGEKEGKMKSSEVKFREAETDDEENNEENTEDKSGSGEEED 1392
>DICTYBASE|DDB_G0272454 [details] [associations]
symbol:DDB_G0272454 "TNF receptor-associated factor
3" species:44689 "Dictyostelium discoideum" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015880 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
SMART:SM00355 dictyBase:DDB_G0272454 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 EMBL:AAFI02000008 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
eggNOG:NOG321306 RefSeq:XP_645272.1 ProteinModelPortal:Q559R2
EnsemblProtists:DDB0217014 GeneID:8618438 KEGG:ddi:DDB_G0272454
InParanoid:Q559R2 OMA:KNYLECK Uniprot:Q559R2
Length = 595
Score = 152 (58.6 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 40/162 (24%), Positives = 82/162 (50%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDR 242
K+L +H L+C F + C C ++F+ ++ H++ C FK++ C Q C + ++++
Sbjct: 312 KDLEKHYLNCPFRPIEC--SFCKSEFTFYSIKDHETNCDFKLVECNQ-CKSQISKKELKY 368
Query: 243 HCITVCQMKLANCPF-YAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRD-------- 293
H C ++ +C F Y C T + + H ++ L H++ + Q+ +
Sbjct: 369 HLDENCPNQIISCTFGY---CDKTFERKELNNHLNETLAQHMIMMKQQQQEEINLLKKEF 425
Query: 294 -KPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKD-LEAK 333
L++ +++ LEK +KL+E P ++ + + IK+ LE K
Sbjct: 426 TNQLQLKDEKIKGLEKLIKEKLSE-PKIK-IDWKIKNYLECK 465
Score = 40 (19.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 418 GKFTEGKNNGRK--VS-----EEDRIHDEQNVNREGTIDGGKINNET----RVNEEQKAN 466
G FT+G NN K +S + I +++N E ++ K NN+ +N E KA
Sbjct: 485 GIFTDGDNNESKGYISIYLFLDTSDIPKGRSINTEFSL---KFNNQRDSAQSLNREYKAT 541
Query: 467 EP 468
P
Sbjct: 542 FP 543
>DICTYBASE|DDB_G0277243 [details] [associations]
symbol:DDB_G0277243 "TRAF-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001293 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR013323 Pfam:PF00917 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061
dictyBase:DDB_G0277243 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
EMBL:AAFI02000019 SUPFAM:SSF49599 Gene3D:3.90.890.10
eggNOG:NOG321306 ProtClustDB:CLSZ2430425 RefSeq:XP_642747.1
ProteinModelPortal:Q86K46 PRIDE:Q86K46 EnsemblProtists:DDB0237657
GeneID:8620937 KEGG:ddi:DDB_G0277243 Uniprot:Q86K46
Length = 423
Score = 145 (56.1 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 41/153 (26%), Positives = 73/153 (47%)
Query: 167 VDFKNE-FHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKI 224
++ N+ C KF + + ++HM C ++++ C E C + H ++ C
Sbjct: 134 IECPNDPIRCKDKFR-KNQTDKHMNKCQYVTINC--EHCKEPVIKNDMPTHIENDCSIIS 190
Query: 225 IPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLL 284
+ CE C D RR ++ H C + +CP GC + I +C + QH ++ +H+
Sbjct: 191 LECEF-CKDKFGRRSLENHIANECPNVVIDCPHKEGGCTARIKRCYLSQHLTEE-DNHIR 248
Query: 285 YILQKL---HR------DKPLKVLKNRVEELEK 308
Y +QK+ HR D+ +K L+ +ELEK
Sbjct: 249 Y-MQKIIEKHRIQVEESDRIIKKLRVDYKELEK 280
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 184 ELNEHMLHCGFISMICPNEG--CNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMD 241
+L H+ C F+ + CPN+ C KF +KH + C + I CE C + +++ DM
Sbjct: 121 QLESHLRECEFVFIECPNDPIRCKDKFRKNQTDKHMNKCQYVTINCEH-CKEPVIKNDMP 179
Query: 242 RHCITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
H C + C F C+ + ++ H
Sbjct: 180 THIENDCSIISLECEF----CKDKFGRRSLENH 208
>DICTYBASE|DDB_G0290931 [details] [associations]
symbol:DDB_G0290931 "TRAF-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR013323 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
dictyBase:DDB_G0290931 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 ProtClustDB:CLSZ2429617
EMBL:AAFI02000172 RefSeq:XP_635487.1 ProteinModelPortal:Q54FD5
EnsemblProtists:DDB0252617 GeneID:8627903 KEGG:ddi:DDB_G0290931
eggNOG:NOG280540 OMA:INELAIC Uniprot:Q54FD5
Length = 511
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 46/168 (27%), Positives = 75/168 (44%)
Query: 153 INRREAIAHILLKNVDFK----NEFHCN--MKFNSEKELNEHMLHCGFISMICPNEGCNA 206
IN + HI +N FK + C+ ++ NS L EH CGF + C C+
Sbjct: 174 INVDQLDRHI--QNCKFKFVKCSHIGCDRVLRLNS---LKEHENQCGFKLVKCEYCACDG 228
Query: 207 KFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTI 266
LE H CP +I C Q C + R + H C C +Y GC+ +
Sbjct: 229 IIQV-QLENHYDECPKFVIGCPQGCLNFFERDQIKSHIENDCNNSTIQCKYYEYGCKVEM 287
Query: 267 PQCMIQQHRHDDLCSHLLY---ILQKLHR--DKPLKVLKNRVEELEKS 309
+ +Q+H + +H L+ ++ KL D+ +K+ + ++E+EKS
Sbjct: 288 KRSELQRHLEN--VNHQLFMGKLIDKLSSTLDQSMKIQELLLKEIEKS 333
Score = 119 (46.9 bits), Expect = 0.00067, P = 0.00067
Identities = 27/108 (25%), Positives = 53/108 (49%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDT 234
C N + +L+ H+ +C F + C + GC+ L++H++ C FK++ CE D
Sbjct: 170 CKEIINVD-QLDRHIQNCKFKFVKCSHIGCDRVLRLNSLKEHENQCGFKLVKCEYCACDG 228
Query: 235 LMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSH 282
+++ ++ H C + CP GC + + I+ H +D C++
Sbjct: 229 IIQVQLENH-YDECPKFVIGCP---QGCLNFFERDQIKSHIEND-CNN 271
>MGI|MGI:107548 [details] [associations]
symbol:Traf5 "TNF receptor-associated factor 5" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031996 "thioesterase binding" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027130 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
MGI:MGI:107548 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0006915 GO:GO:0042981 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0004871 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907 SUPFAM:SSF49599
GO:GO:0035631 Gene3D:3.90.890.10 HOVERGEN:HBG058222
eggNOG:NOG239194 HOGENOM:HOG000231557 CTD:7188 KO:K09849
OrthoDB:EOG4JWVD2 PANTHER:PTHR10131:SF23 EMBL:D78141 EMBL:D83528
EMBL:BC012702 IPI:IPI00323891 RefSeq:NP_035763.1 UniGene:Mm.380491
UniGene:Mm.389227 PDB:4GJH PDBsum:4GJH ProteinModelPortal:P70191
SMR:P70191 IntAct:P70191 STRING:P70191 PhosphoSite:P70191
PRIDE:P70191 GeneID:22033 KEGG:mmu:22033 InParanoid:P70191
NextBio:301794 CleanEx:MM_TRAF5 Genevestigator:P70191
Uniprot:P70191
Length = 558
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 45/186 (24%), Positives = 84/186 (45%)
Query: 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHM-LHCGFISMICPNEGCNAKFSAGHLE 214
++ + H + V NE C K++ EH+ +C F C C +L+
Sbjct: 126 QDHLQHCSFQAVPCPNE-SCREAM-LRKDVKEHLSAYCRFREEKCLY--CKRDIVVTNLQ 181
Query: 215 KHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
H+ + CP + C +C T+ R ++ H +TVC +CPF GC + + +
Sbjct: 182 DHEENSCPAYPVSCPNRCVQTIPRARVNEH-LTVCPEAEQDCPFKHYGCTVKGKRGNLLE 240
Query: 274 HRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAK 333
H L H+L +L+K ++ L+ R+ +L +S K ++ ++ L+ +K E +
Sbjct: 241 HERAALQDHMLLVLEKNYQ------LEQRISDLYQSLEQKESK---IQQLAETVKKFEKE 291
Query: 334 LGPFKE 339
L F +
Sbjct: 292 LKQFTQ 297
Score = 119 (46.9 bits), Expect = 0.00077, P = 0.00077
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV-C 220
+L +V KN CN + + +H+ HC F ++ CPNE C +++H S C
Sbjct: 103 VLNLHVYCKNAPGCNARIILGR-FQDHLQHCSFQAVPCPNESCREAMLRKDVKEHLSAYC 161
Query: 221 PFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN-CPFYAVGCQS----TIPQCMIQQH 274
F+ E+KC +RD+ +T Q N CP Y V C + TIP+ + +H
Sbjct: 162 RFR----EEKC--LYCKRDI---VVTNLQDHEENSCPAYPVSCPNRCVQTIPRARVNEH 211
>DICTYBASE|DDB_G0272098 [details] [associations]
symbol:DDB_G0272098 "TNF receptor-associated factor
5" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50144 PROSITE:PS50145
dictyBase:DDB_G0272098 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
EMBL:AAFI02000007 SUPFAM:SSF49599 RefSeq:XP_645327.1
ProteinModelPortal:Q55A66 EnsemblProtists:DDB0216959 GeneID:8618289
KEGG:ddi:DDB_G0272098 eggNOG:euNOG39425 InParanoid:Q55A66
Uniprot:Q55A66
Length = 1084
Score = 104 (41.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 59/269 (21%), Positives = 104/269 (38%)
Query: 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV-CPFKII 225
+D K C K N L+EH C + ++ C E CN + E H S C I
Sbjct: 147 IDEKLLKRCG-KINKSL-LDEHDEQCLYQTITC--EHCNELINRIDHEIHLSEWCSDIPI 202
Query: 226 PCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQH--RHDDLCSHL 283
CE C ++ + H + C + +C + A GCQ + + + +H + ++
Sbjct: 203 KCED-CKHVFKKKYIQEHKESNCPESVIDCVYVAGGCQKKLKRYNMSKHLVTANHHSQYM 261
Query: 284 LYILQKLHRDKPLKVLKNRVEE-LEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTV 342
I+++ ++D +K L N +E L K + D L +++ + IK+ K+ E +
Sbjct: 262 SKIIEEQNQD--IKELHNFIENHLSKKFID-LDTIVNIQK--YLIKNKNQKISQLTE-II 315
Query: 343 NRYSXXXXXXXXXXXXXXXPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGG 402
R TI+ N N+ + N K N++ NE
Sbjct: 316 KRVDNSFIGLHEFDELEDYISN--TIDIISNFDNYKNSNSNNNNNNKNTNENENT-NENT 372
Query: 403 KGNEQ-----EKDSDGDVKEGKFTEGKNN 426
NE D++ ++ E K N+
Sbjct: 373 NENENIDIVGNSDNENNINENKAENNINS 401
Score = 90 (36.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 27/143 (18%), Positives = 54/143 (37%)
Query: 395 KSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRK--VSEEDRIHDEQNVNREG-TIDGG 451
+ + N+ G GNE E +++ + + E +N V+E++ + N+N T
Sbjct: 727 QEQKNQNGNGNENENENENENENENENENENENANANVNEKENEKENSNINTSNDTEPTN 786
Query: 452 KINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGK 511
I + + N+E + + + K + N+ N + + N N
Sbjct: 787 DILEDIKKNKENEDSNESEDNKNNNIKSVEDTNNNNNNNNNNNNNNNNNNNNNNNNNNNN 846
Query: 512 TNGVRVNEEEKI-NAEGKVNGRD 533
N V + +K N E + D
Sbjct: 847 NNNENVYDIKKDRNRENVEDSND 869
Score = 72 (30.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 26/131 (19%), Positives = 49/131 (37%)
Query: 405 NEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKI----NNE---T 457
N+ + ++ + E NN K +++D I N T I NNE T
Sbjct: 525 NDIQMENINENINNNINENNNNNNKNNDDDNITAATATNNSNTTSTHTILNGTNNEASMT 584
Query: 458 RVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRV 517
+NE + T+ ++N+T + + + +N +T +R
Sbjct: 585 DINETTSTTTTAETTEATASESTEESNNTAETTTTTTTTTTTITTAAETVNSTETITLRT 644
Query: 518 NEEEKINAEGK 528
+E K+ +GK
Sbjct: 645 SE--KVEEKGK 653
>UNIPROTKB|K7ER49 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] InterPro:IPR001293 InterPro:IPR008974
InterPro:IPR027138 PROSITE:PS50145 SUPFAM:SSF49599 EMBL:AC010761
HGNC:HGNC:12034 PANTHER:PTHR10131:SF46 Ensembl:ENST00000473421
Uniprot:K7ER49
Length = 90
Score = 116 (45.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 177 MKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTL 235
MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC +
Sbjct: 1 MKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGARM 57
Query: 236 MRRDMDRHCITVCQMKLANCPF 257
MRR + +H + C + C +
Sbjct: 58 MRRLLAQHATSECPKRTQPCTY 79
>UNIPROTKB|P82970 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527
GO:GO:0045893 GO:GO:0005654 GO:GO:0005730 GO:GO:0000785
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:CH471104 GO:GO:0031492 OrthoDB:EOG4CZBHP EMBL:AF250329
EMBL:AF250330 EMBL:AK094058 EMBL:AL391294 EMBL:BC005342
IPI:IPI00006157 RefSeq:NP_110390.1 UniGene:Hs.282204
ProteinModelPortal:P82970 IntAct:P82970 STRING:P82970
PhosphoSite:P82970 DMDM:23396771 PaxDb:P82970 PRIDE:P82970
DNASU:79366 Ensembl:ENST00000358130 GeneID:79366 KEGG:hsa:79366
UCSC:uc004eee.1 CTD:79366 GeneCards:GC0XM080370 HGNC:HGNC:8013
HPA:HPA000511 MIM:300385 neXtProt:NX_P82970 PharmGKB:PA31789
eggNOG:NOG134182 HOGENOM:HOG000113856 HOVERGEN:HBG094823
InParanoid:P82970 OMA:KDDGGKD ChiTaRS:HMGN5 GenomeRNAi:79366
NextBio:68337 ArrayExpress:P82970 Bgee:P82970 CleanEx:HS_NSBP1
Genevestigator:P82970 GermOnline:ENSG00000198157 Uniprot:P82970
Length = 282
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 47/166 (28%), Positives = 72/166 (43%)
Query: 372 VNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVS 431
V + EE +AT+K EK++ NE E E+D + + E + G +
Sbjct: 98 VEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDG 157
Query: 432 EEDRIHDEQNVNREGTIDG-----GKINNET--RVNEEQKANEPGKVTKGEKVSEEGKAN 484
+ED+ +E+ + + DG GK N E E++K E K T K +E+GK
Sbjct: 158 KEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEK 217
Query: 485 DTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEE--KINAEGK 528
K K+V+ E K E+ +EG E+E K EGK
Sbjct: 218 GDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEGK 263
Score = 133 (51.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 44/146 (30%), Positives = 72/146 (49%)
Query: 376 EEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDR 435
E+G+ DK +EK + K N KG + ++ DG K+G+ +GK NG E+
Sbjct: 140 EKGEAGKEDK-DEKGEEDGKEDKNGNEKGEDAKEKEDG--KKGE--DGKGNGEDGKEKGE 194
Query: 436 IHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRA 495
E+ +R+ T DG K N + + ++K + KV + EK E+GK ++ G N+E
Sbjct: 195 DEKEEE-DRKETGDG-KENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGG--NEEEAG 250
Query: 496 SEGRKVSEERNINEGKTNGVRVNEEE 521
E + EE EGK + E++
Sbjct: 251 KEKEDLKEEE---EGKEED-EIKEDD 272
>WB|WBGene00006612 [details] [associations]
symbol:trf-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SUPFAM:SSF49599
EMBL:Z93382 Gene3D:3.90.890.10 HSSP:Q12933
GeneTree:ENSGT00550000074359 KO:K09848 EMBL:AF348168 PIR:T22238
RefSeq:NP_499773.2 UniGene:Cel.9956 ProteinModelPortal:G5EG80
SMR:G5EG80 EnsemblMetazoa:F45G2.6 GeneID:176767
KEGG:cel:CELE_F45G2.6 CTD:176767 WormBase:F45G2.6 OMA:RTNEAKS
NextBio:893922 Uniprot:G5EG80
Length = 462
Score = 138 (53.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 38/134 (28%), Positives = 57/134 (42%)
Query: 161 HILLKNVDFKNEFHCNM---KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD 217
H L FK+ C +F ++ +L +H C +C CN E+H
Sbjct: 97 HDHLSECTFKSSLKCEKCGRQF-AKNDLEKHRAKCELNRAVC--SFCNKTIRDSDRERHP 153
Query: 218 SVCPFKIIPCEQKCPDT-LMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
CP II C +C T R +++ HC + C CPF GC + IQQH
Sbjct: 154 KTCPQVIISCPFQCGLTDRPRLEIEAHCPS-CPNVDNVCPFVPYGCTFAGGKESIQQHLS 212
Query: 277 DDLCSHLLYILQKL 290
D+ HL+Y+ ++
Sbjct: 213 DEPVRHLMYLCDEI 226
>FB|FBgn0026319 [details] [associations]
symbol:Traf4 "TNF-receptor-associated factor 4" species:7227
"Drosophila melanogaster" [GO:0007391 "dorsal closure"
evidence=TAS] [GO:0009790 "embryo development" evidence=IEP]
[GO:0002168 "instar larval development" evidence=IEP] [GO:0008063
"Toll signaling pathway" evidence=NAS] [GO:0006952 "defense
response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0048102 "autophagic cell death" evidence=IEP]
[GO:0035071 "salivary gland cell autophagic cell death"
evidence=IEP] [GO:0046529 "imaginal disc fusion, thorax closure"
evidence=IGI] [GO:0046330 "positive regulation of JNK cascade"
evidence=IGI] [GO:0001654 "eye development" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0045167 "asymmetric
protein localization involved in cell fate determination"
evidence=IMP] [GO:0045179 "apical cortex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007370 "ventral furrow formation" evidence=IMP]
[GO:0003384 "apical constriction involved in gastrulation"
evidence=IMP] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0034332 "adherens junction organization" evidence=IMP]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061
GO:GO:0045167 GO:GO:0006911 EMBL:AE014134 GO:GO:0046872
GO:GO:0007391 GO:GO:0008270 GO:GO:0046330 GO:GO:0043065
GO:GO:0045179 GO:GO:0007370 GO:GO:0035071 GO:GO:0004842
GO:GO:0008063 SUPFAM:SSF49599 GO:GO:0001654 GO:GO:0002168
GO:GO:0046529 Gene3D:3.90.890.10 eggNOG:NOG321306
GeneTree:ENSGT00550000074359 CTD:9618 KO:K09848
RefSeq:NP_001097080.1 UniGene:Dm.3100 ProteinModelPortal:A8DYU9
SMR:A8DYU9 STRING:A8DYU9 EnsemblMetazoa:FBtr0112925 GeneID:33638
KEGG:dme:Dmel_CG3048 UCSC:CG3048-RC FlyBase:FBgn0026319 OMA:DPTWENF
OrthoDB:EOG48GTJM PhylomeDB:A8DYU9 GenomeRNAi:33638 NextBio:784548
Bgee:A8DYU9 Uniprot:A8DYU9
Length = 559
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ +C F GC
Sbjct: 294 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGC 353
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSY 310
+ P+ M++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 354 RFKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY 402
>ZFIN|ZDB-GENE-040308-1 [details] [associations]
symbol:traf4a "tnf receptor-associated factor 4a"
species:7955 "Danio rerio" [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040308-1 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
eggNOG:NOG321306 HSSP:Q12933 GeneTree:ENSGT00550000074359
HOGENOM:HOG000004841 HOVERGEN:HBG103438 KO:K09848 OrthoDB:EOG4868C9
PANTHER:PTHR10131:SF46 EMBL:CR855391 EMBL:CR848661 EMBL:BC065969
EMBL:AJ556548 IPI:IPI00486500 RefSeq:NP_991325.1 UniGene:Dr.81750
SMR:Q7T1K2 Ensembl:ENSDART00000016024 GeneID:404045 KEGG:dre:404045
CTD:404045 InParanoid:Q7T1K2 OMA:TECPKRT NextBio:20817516
Uniprot:Q7T1K2
Length = 470
Score = 136 (52.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 30/103 (29%), Positives = 51/103 (49%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C++K + ++L EH+ H C + C E C ++F+ E H +CP + + CE KC
Sbjct: 117 CSVKL-TRRDLPEHLQHDCPKRKVKC--EFCGSEFTGEAYENHQGICPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+MRR + +H +T C + C + C IQ H++
Sbjct: 174 RMMRRLLSQHTMTECPKRTQPCKY----CGKEFVYDTIQNHQY 212
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 185 LNEH-MLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDR 242
L++H M C + C + C +F ++ H CP + C +C + R D+
Sbjct: 180 LSQHTMTECPKRTQPC--KYCGKEFVYDTIQNHQYHCPRFPVQCPNQCGTPNIAREDLAN 237
Query: 243 HCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKN 301
H C L CPF GC+ P+ I +H + SHL + + R + + L+
Sbjct: 238 HVKESCGSALVLCPFKEAGCKHRCPKMAIGRHLEESTKSHLTMMCSLVGRQRQEILELRR 297
Query: 302 RVEELEKSY 310
+EEL S+
Sbjct: 298 EMEELSVSH 306
>TAIR|locus:2027513 [details] [associations]
symbol:AT1G56660 "AT1G56660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 EMBL:AC009323
IPI:IPI00548934 PIR:C96608 RefSeq:NP_176058.1 UniGene:At.48313
PRIDE:Q9FXB5 EnsemblPlants:AT1G56660.1 GeneID:842121
KEGG:ath:AT1G56660 TAIR:At1g56660 OMA:KKHEDVS
ProtClustDB:CLSN2912802 Genevestigator:Q9FXB5 Uniprot:Q9FXB5
Length = 522
Score = 136 (52.9 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 48/164 (29%), Positives = 83/164 (50%)
Query: 370 GE-VNISEEGKINATDKVNEK--EKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNN 426
GE V + E K + +KV K E+ S KSK + K ++ K+ D +VKE K + K +
Sbjct: 28 GENVEVEMEVKAKSIEKVKAKKDEESSGKSKKD---KEKKKGKNVDSEVKEDKDDDKKKD 84
Query: 427 GRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDT 486
G+ VS++ H+E + G ++ + ++ +V E +K ++ GK K E++ EE +
Sbjct: 85 GKMVSKK---HEEGH----GDLEVKE--SDVKVEEHEKEHKKGKEKKHEELEEEKEGKK- 134
Query: 487 GKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVN 530
K NK+ + G + ++ E K V +EE +GK N
Sbjct: 135 -KKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKN 177
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 63/259 (24%), Positives = 112/259 (43%)
Query: 284 LYILQKLHRDKPLKVLKN-RVE-ELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDT 341
L++ K P + +N VE E++ +K+ D S + KD E K G +
Sbjct: 13 LHVKIKTQELDPKEKGENVEVEMEVKAKSIEKVKAKKDEESSGKSKKDKEKKKGKNVDSE 72
Query: 342 VNRYSXXXXXXXXXXXXXXXPDGEGTIN---GEVNISEEGKINATDKVNEKEKISNKSKP 398
V +G G + +V + E K + K + E++ + +
Sbjct: 73 VKEDKDDDKKKDGKMVSKKHEEGHGDLEVKESDVKVEEHEKEHKKGKEKKHEELEEEKEG 132
Query: 399 NEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEE-DRIHDE---QNVNRE----GTIDG 450
+ K N++EKD G ++ K + + VS+E + + +E +N +E GT +
Sbjct: 133 KK--KKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEK 190
Query: 451 GKI-NNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINE 509
K E + EE K+NE KV KG+K E+G+ D K ++E + E + +E +
Sbjct: 191 KKKPKKEKKQKEESKSNEDKKV-KGKK--EKGEKGDLEKEDEE-KKKEHDETDQEMKEKD 246
Query: 510 GKTNGVRVNEEEKINAEGK 528
K N + E+++ AE K
Sbjct: 247 SKKN--KKKEKDESCAEEK 263
>GENEDB_PFALCIPARUM|PFB0710c [details] [associations]
symbol:PFB0710c "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE001362 PIR:A71608 RefSeq:XP_001349661.1
ProteinModelPortal:O96235 IntAct:O96235 MINT:MINT-1576174
EnsemblProtists:PFB0710c:mRNA GeneID:812743 KEGG:pfa:PFB0710c
EuPathDB:PlasmoDB:PF3D7_0215600 OMA:DEHNQND ProtClustDB:CLSZ2514728
Uniprot:O96235
Length = 403
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 39/156 (25%), Positives = 66/156 (42%)
Query: 369 NGEVNISEEGK-INATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNG 427
N + IS+E K N DK + ++ K N+ G+ N+ +D+ D KN+
Sbjct: 27 NLDDEISKEKKESNKNDKHKKNDQHKKNDKSNQNGEDNQNGEDNQNDESNQNDEHKKNDE 86
Query: 428 RKVSEEDRIHDEQNVNRE-GTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDT 486
K ++E +DE N N E D N+E N+E N+ ++E ND
Sbjct: 87 HKKNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQNDESNQND- 145
Query: 487 GKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEK 522
K KE+ E + ++ N +R +++ K
Sbjct: 146 -KNRKEIPPKEEKDKENNPSVVMENNNNIRKDQDNK 180
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 34/146 (23%), Positives = 64/146 (43%)
Query: 384 DKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVN 443
DK N ++ S + NE ++ D ++ + K KN+ K +++ + +D+ N N
Sbjct: 2 DK-NTLKRRSRLLQKNEARMSMLLGRNLDDEISKEKKESNKNDKHKKNDQHKKNDKSNQN 60
Query: 444 REGTIDG-GKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVS 502
E +G N+E+ N+E K N+ K ++E ND N E ++ +
Sbjct: 61 GEDNQNGEDNQNDESNQNDEHKKNDEHKKNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQN 120
Query: 503 EERNINEGKTNGVRVNEEEKINAEGK 528
+E N N+ N+ ++ N K
Sbjct: 121 DEHNQNDEHNQNDEHNQNDESNQNDK 146
>UNIPROTKB|O96235 [details] [associations]
symbol:PFB0710c "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE001362 PIR:A71608 RefSeq:XP_001349661.1
ProteinModelPortal:O96235 IntAct:O96235 MINT:MINT-1576174
EnsemblProtists:PFB0710c:mRNA GeneID:812743 KEGG:pfa:PFB0710c
EuPathDB:PlasmoDB:PF3D7_0215600 OMA:DEHNQND ProtClustDB:CLSZ2514728
Uniprot:O96235
Length = 403
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 39/156 (25%), Positives = 66/156 (42%)
Query: 369 NGEVNISEEGK-INATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNG 427
N + IS+E K N DK + ++ K N+ G+ N+ +D+ D KN+
Sbjct: 27 NLDDEISKEKKESNKNDKHKKNDQHKKNDKSNQNGEDNQNGEDNQNDESNQNDEHKKNDE 86
Query: 428 RKVSEEDRIHDEQNVNRE-GTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDT 486
K ++E +DE N N E D N+E N+E N+ ++E ND
Sbjct: 87 HKKNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQNDESNQND- 145
Query: 487 GKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEK 522
K KE+ E + ++ N +R +++ K
Sbjct: 146 -KNRKEIPPKEEKDKENNPSVVMENNNNIRKDQDNK 180
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 34/146 (23%), Positives = 64/146 (43%)
Query: 384 DKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVN 443
DK N ++ S + NE ++ D ++ + K KN+ K +++ + +D+ N N
Sbjct: 2 DK-NTLKRRSRLLQKNEARMSMLLGRNLDDEISKEKKESNKNDKHKKNDQHKKNDKSNQN 60
Query: 444 REGTIDG-GKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVS 502
E +G N+E+ N+E K N+ K ++E ND N E ++ +
Sbjct: 61 GEDNQNGEDNQNDESNQNDEHKKNDEHKKNDEHNQNDEHNQNDEHNQNDEHNQNDEHNQN 120
Query: 503 EERNINEGKTNGVRVNEEEKINAEGK 528
+E N N+ N+ ++ N K
Sbjct: 121 DEHNQNDEHNQNDEHNQNDESNQNDK 146
>TAIR|locus:504955937 [details] [associations]
symbol:AT2G22795 "AT2G22795" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] GO:GO:0005794 EMBL:CP002685
GO:GO:0005768 GO:GO:0005802 IPI:IPI00534353 RefSeq:NP_850032.1
UniGene:At.45724 UniGene:At.74141 PRIDE:F4IKG5
EnsemblPlants:AT2G22795.1 GeneID:816810 KEGG:ath:AT2G22795
OMA:ESTCRKT Uniprot:F4IKG5
Length = 734
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/174 (29%), Positives = 70/174 (40%)
Query: 365 EGTINGEVNISEE-GKINATDKVNE--KEKISNKSKPNEGGKGNE------QEKDSDGDV 415
E G N+ E N DK NE + NK K +EG NE +EK G V
Sbjct: 78 EAEDEGSKNVVESFNSGNGDDKENEIVEGGEENKEKESEGIVSNEDSNSEIEEKKDSGGV 137
Query: 416 KEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEP---GKVT 472
+E + E ++NG E ++ E++ E +GG NE EE + E G
Sbjct: 138 EESEVEEKRDNGGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKDNGGTE 197
Query: 473 KGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAE 526
+ EK E + K N +E + SEE + E K NG EK E
Sbjct: 198 ENEKSGTEESEVEERKENGGTEENE-KSGSEESEVEEKKDNGGTEESREKSGTE 250
>DICTYBASE|DDB_G0290961 [details] [associations]
symbol:zfaA "TRAF-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 Pfam:PF00917 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
dictyBase:DDB_G0290961 Prosite:PS00518 GO:GO:0007275 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000154_GR
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
EMBL:AAFI02000174 EMBL:M18106 PIR:A29361 RefSeq:XP_635416.1
ProteinModelPortal:P11467 EnsemblProtists:DDB0216198 GeneID:8627917
KEGG:ddi:DDB_G0290961 eggNOG:NOG321306 OMA:SEPMISE
ProtClustDB:CLSZ2429617 Uniprot:P11467
Length = 460
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/146 (23%), Positives = 67/146 (45%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDT 234
C K + +++ H+++C + + C +GC LE H + C FK++ C+ D
Sbjct: 130 CKEKIEVD-QIDSHLINCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVTCDFCKRDD 188
Query: 235 LMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLL---YILQKLH 291
+ +++++ H T C M +C + GC I + I H +D C+ + Y Q
Sbjct: 189 IKKKELETHYKT-CPMVPIDC---SQGCSVKIERKSIIDHIENDCCNTQIPCKYFEQGCK 244
Query: 292 RDKPLKVLKNRVEELE-KSYFDKLAE 316
+ L+N +E + ++Y L E
Sbjct: 245 VEMKRSELQNHLERVNHQNYMGILIE 270
>GENEDB_PFALCIPARUM|PF10_0278 [details] [associations]
symbol:PF10_0278 "BRIX domain containig
protein, putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014185 InterPro:IPR007109 Pfam:PF04427 SMART:SM00879
PROSITE:PS50833 RefSeq:XP_001347562.1 ProteinModelPortal:Q8IJC0
EnsemblProtists:PF10_0278:mRNA GeneID:810435 KEGG:pfa:PF10_0278
EuPathDB:PlasmoDB:PF3D7_1028400 HOGENOM:HOG000284581 Uniprot:Q8IJC0
Length = 483
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 46/178 (25%), Positives = 86/178 (48%)
Query: 369 NGEVNIS-----EEGKINATDKVNEKEKISNKSKPNEG-GKGNEQE-KDSDGDVKEGKFT 421
N E+N E GK N DK N+ +K ++ +K N+ K N+ + K++D D K
Sbjct: 203 NNEINADLGKKVEAGKEN-NDKNNDDDKNNDDNKNNDDDNKNNDDDNKNNDDDNKNND-- 259
Query: 422 EGKNNGR-KVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEE 480
+ KNN K +++D+ +D+ N N + D K N++ + N++ K N+ K K +++
Sbjct: 260 DDKNNDDDKNNDDDKNNDDDNKNND---DDNKNNDDDKNNDDDKNNDDDKNNDDNKNNDD 316
Query: 481 GKANDTGKVNKEVRAS--EGRKVSEERNINEGKTN--GVRVN-EEEKINAEGKVNGRD 533
N+ + +V + E + + N+N+ N + N K N+ K+ +D
Sbjct: 317 NNKNNNNDDDDDVTLNFTEDAMSTTKENVNDSFKNMDNIYNNLNTNKFNSYDKLKDKD 374
>UNIPROTKB|Q8IJC0 [details] [associations]
symbol:PF10_0278 "Nucleolar preribosomal assembly protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014185 InterPro:IPR007109 Pfam:PF04427 SMART:SM00879
PROSITE:PS50833 RefSeq:XP_001347562.1 ProteinModelPortal:Q8IJC0
EnsemblProtists:PF10_0278:mRNA GeneID:810435 KEGG:pfa:PF10_0278
EuPathDB:PlasmoDB:PF3D7_1028400 HOGENOM:HOG000284581 Uniprot:Q8IJC0
Length = 483
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 46/178 (25%), Positives = 86/178 (48%)
Query: 369 NGEVNIS-----EEGKINATDKVNEKEKISNKSKPNEG-GKGNEQE-KDSDGDVKEGKFT 421
N E+N E GK N DK N+ +K ++ +K N+ K N+ + K++D D K
Sbjct: 203 NNEINADLGKKVEAGKEN-NDKNNDDDKNNDDNKNNDDDNKNNDDDNKNNDDDNKNND-- 259
Query: 422 EGKNNGR-KVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEE 480
+ KNN K +++D+ +D+ N N + D K N++ + N++ K N+ K K +++
Sbjct: 260 DDKNNDDDKNNDDDKNNDDDNKNND---DDNKNNDDDKNNDDDKNNDDDKNNDDNKNNDD 316
Query: 481 GKANDTGKVNKEVRAS--EGRKVSEERNINEGKTN--GVRVN-EEEKINAEGKVNGRD 533
N+ + +V + E + + N+N+ N + N K N+ K+ +D
Sbjct: 317 NNKNNNNDDDDDVTLNFTEDAMSTTKENVNDSFKNMDNIYNNLNTNKFNSYDKLKDKD 374
>DICTYBASE|DDB_G0293202 [details] [associations]
symbol:DDB_G0293202 "TRAF-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001293 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR013323 Pfam:PF00917 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 dictyBase:DDB_G0293202 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000200 GO:GO:0004842
SUPFAM:SSF49599 Gene3D:3.90.890.10 RefSeq:XP_629255.1
ProteinModelPortal:Q54C11 EnsemblProtists:DDB0237662 GeneID:8629137
KEGG:ddi:DDB_G0293202 eggNOG:NOG259670 OMA:EHIDEEC Uniprot:Q54C11
Length = 437
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCPD 233
C +F K L++H+ CGF CPN CN K +E+H D C I C + C
Sbjct: 145 CTGEFRL-KNLDQHLQTCGFQLEDCPN--CNNKIIRKSIEEHIDEECLKTKIKCLE-CGS 200
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD-DLCSHLLYILQKLHR 292
T+ R DMD H VC + C GC + + H + S+L + +L+
Sbjct: 201 TVERGDMDFHLDNVCPNIVIPCILCDNGCDLLFKRSELSNHLQSIEHISNLNNKIDELNE 260
Query: 293 ---DKPLKVLKNRVEELE 307
D + L +VE+LE
Sbjct: 261 TLNDLQISELNQKVEQLE 278
>DICTYBASE|DDB_G0290685 [details] [associations]
symbol:DDB_G0290685 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0290685 EMBL:AAFI02000164 EMBL:AAFI02000163
eggNOG:NOG237964 OMA:QDGDENN Uniprot:Q54G14
Length = 1081
Score = 137 (53.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
DGE NG+ N ++ G+ N D+ N+ + + + N+ G N Q+ + G +
Sbjct: 436 DGENNQNGDEN-NQGGENNQGDENNQGGENNQGDQNNQDGGENNQDGGENNQDGHGNNQD 494
Query: 423 GKNNGRKVSEEDRIHDEQNVNR-EGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEG 481
G+NN + E ++ E N + E DGG+ NN+ Q E + GE + G
Sbjct: 495 GENN-QDGGENNQDSGENNQDGGENNQDGGE-NNQDGGENNQDGGENNQ-DGGENNQDGG 551
Query: 482 KANDTGKVNKEVRASEGRKVSEERNINEGKTN--GVRVNEEEKINAEGKVNGRD 533
+ N G+ N++ ++ E N + G+ N G N++ + N +G N +D
Sbjct: 552 ENNQDGENNQDGENNQENNRDGENNQDGGENNQDGGENNQDGENNQDGGENNQD 605
Score = 133 (51.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 44/174 (25%), Positives = 79/174 (45%)
Query: 364 GEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQ-EKDSDGDVKEGKFTE 422
GE +G N + G+ N N ++ N +GG+ N+ E + DG+ + +
Sbjct: 516 GENNQDGGENNQDGGENNQDGGENNQDGGENNQ---DGGENNQDGENNQDGENNQENNRD 572
Query: 423 GKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
G+NN + E ++ E N + E DGG+ NN+ +Q E + GE ++G+
Sbjct: 573 GENN-QDGGENNQDGGENNQDGENNQDGGE-NNQDDGENKQDGGENNQ-DGGENNQDDGE 629
Query: 483 ANDTGKVNKEVRASEGRKVSEERNINEGKTN---GVRVNEEEKINAEGKVNGRD 533
N G+ N++ E + +E N + G+ N G + + N +G N +D
Sbjct: 630 NNQDGENNQD--GGENNQDGDENNQDSGENNQDSGENNQDGGENNQDGDENNQD 681
Score = 131 (51.2 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 43/171 (25%), Positives = 76/171 (44%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
DGE +GE N +E + + + E + + N+ G+ N+ +++ D E K
Sbjct: 556 DGENNQDGENN--QENNRDGENNQDGGENNQDGGENNQDGENNQDGGENNQDDGENKQDG 613
Query: 423 GKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
G+NN + E ++ E N + E DGG+ NN+ Q + E + GE + G+
Sbjct: 614 GENN-QDGGENNQDDGENNQDGENNQDGGE-NNQDGDENNQDSGENNQ-DSGENNQDGGE 670
Query: 483 ANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
N G N + E + E E +G N++ + N +G+ N +D
Sbjct: 671 NNQDGDENNQ-DGGENNQDGENNQNGENNQDGGENNQDGENNQDGE-NNQD 719
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 43/173 (24%), Positives = 85/173 (49%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
DGE NGE N ++G N D N ++ +N+ G E +D D ++G
Sbjct: 688 DGENNQNGENN--QDGGENNQDGENNQDGENNQDGGENNQDGGENNQDGGEDNQDG---- 741
Query: 423 GKNNGRKVSEEDRIHDEQNVNR-EGTIDGGKINNETRVNEE-QKANEPGKVTK-GEKVSE 479
G+NN ++ E+++ E N + E DGG+ N N++ + N+ G+ + G++ ++
Sbjct: 742 GENN-QEGGEDNQDGGEDNQDGGEDNQDGGENNQGDENNQDVDENNQDGENNQDGDENNQ 800
Query: 480 EGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEE--EKINAEGKVN 530
+G+ N G+ N++ + + + ++ +E +G N++ E N +G N
Sbjct: 801 DGENNQDGENNQDGDENNNQDGEQNQDGDENNQDGGENNQDGDENNNQDGDEN 853
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 40/154 (25%), Positives = 74/154 (48%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
DGE +G+ N +++G+ N N +E N ++ G+++ + DGD E +
Sbjct: 886 DGENNQDGDENNNQDGEQNQDGDENNQEGDENNNQ------GDDENNNQDGD--ENNNQD 937
Query: 423 GKNNGRKVSEEDRIHDEQNV-NREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEG 481
G N + E ++ DE N N E DG + NN+ +E + G+ +G++ +++G
Sbjct: 938 GDENNQDGDENNQDGDENNQGNDENNQDGDQ-NNQG--GDENNQDGDGENNQGDENNQDG 994
Query: 482 KAN--DTGKVNKEVRASEGRKVSEERNINEGKTN 513
N D G+ N++ SE + + E N + N
Sbjct: 995 GENNQDGGENNQDQDGSENNQGNNENNQGGDENN 1028
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 43/172 (25%), Positives = 76/172 (44%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGK 424
E +GE N ++G N D N ++ +N+ + EQ +D D + ++G G+
Sbjct: 784 ENNQDGENN--QDGDENNQDGENNQDGENNQDGDENNNQDGEQNQDGDENNQDG----GE 837
Query: 425 NNGRKVSEEDRIHDEQNVNREG---TIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEG 481
NN ++ DE N N++G DGG+ N + N Q E + + + +E
Sbjct: 838 NNQDGDENNNQDGDENN-NQDGGENNQDGGENNQDGDENNNQDGGENNQDGENNQDGDEN 896
Query: 482 KANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
N G+ N++ E + +E N N+G + +E N +G N +D
Sbjct: 897 N-NQDGEQNQD--GDENNQEGDENN-NQGDDENNNQDGDENNNQDGDENNQD 944
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
DGE +G N + G+ N + ++ N EGG+ N+ + + D E
Sbjct: 713 DGENNQDGGENNQDGGENNQDGGEDNQDGGENNQ---EGGEDNQDGGEDNQDGGEDNQDG 769
Query: 423 GKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
G+NN + +D DE N + E DG + N + N++ + N+ G E +++G+
Sbjct: 770 GENNQGDENNQDV--DENNQDGENNQDGDENNQDGENNQDGENNQDGD----ENNNQDGE 823
Query: 483 ANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
N G N + E + +E N +G N + E N +G N +D
Sbjct: 824 QNQDGDENNQ-DGGENNQDGDENNNQDGDENNNQDGGEN--NQDGGENNQD 871
Score = 123 (48.4 bits), Expect = 0.00066, P = 0.00066
Identities = 46/174 (26%), Positives = 83/174 (47%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
DGE +G N + G+ N D N ++ +N+ +GG+ N+ +++ D E
Sbjct: 606 DGENKQDGGENNQDGGENNQDDGENNQDGENNQ----DGGENNQDGDENNQDSGENNQDS 661
Query: 423 GKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
G+NN + E ++ DE N DGG+ N + N+ + N+ G GE +++G+
Sbjct: 662 GENN-QDGGENNQDGDENNQ------DGGENNQDGENNQNGENNQDG----GEN-NQDGE 709
Query: 483 ANDTGKVNKEVRASEGRKVSEERNINEGKTN--GVRVNEEE-KINAEGKVNGRD 533
N G+ N++ E + E N + G+ N G N+E + N +G + +D
Sbjct: 710 NNQDGENNQD--GGENNQDGGENNQDGGEDNQDGGENNQEGGEDNQDGGEDNQD 761
Score = 122 (48.0 bits), Expect = 0.00084, P = 0.00084
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGK-GNEQEKDSDGDVKEG--K 419
DGE +GE N + G+ N N ++ N E + G E +D D + ++G
Sbjct: 627 DGENNQDGENN-QDGGENNQDGDENNQDSGENNQDSGENNQDGGENNQDGDENNQDGGEN 685
Query: 420 FTEGKNNGRKVSEED---RIHD-EQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGE 475
+G+NN + +D D E N + E DGG+ NN+ Q E + GE
Sbjct: 686 NQDGENNQNGENNQDGGENNQDGENNQDGENNQDGGE-NNQDGGENNQDGGEDNQ-DGGE 743
Query: 476 KVSEEGKAN-DTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEE-KINAEGKVNGRD 533
E G+ N D G+ N++ E + E N + V N ++ + N +G N +D
Sbjct: 744 NNQEGGEDNQDGGEDNQD--GGEDNQDGGENNQGDENNQDVDENNQDGENNQDGDENNQD 801
>DICTYBASE|DDB_G0273505 [details] [associations]
symbol:DDB_G0273505 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
dictyBase:DDB_G0273505 dictyBase:DDB_G0273435 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AAFI02000010 SUPFAM:SSF49599
eggNOG:NOG289765 RefSeq:XP_644617.1 RefSeq:XP_644633.1
ProteinModelPortal:Q557K2 EnsemblProtists:DDB0168209
EnsemblProtists:DDB0217166 GeneID:8618981 GeneID:8618996
KEGG:ddi:DDB_G0273435 KEGG:ddi:DDB_G0273505 InParanoid:Q557K2
OMA:GERINDC ProtClustDB:CLSZ2431245 Uniprot:Q557K2
Length = 409
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/162 (25%), Positives = 67/162 (41%)
Query: 187 EHMLHCGFISMICP-NEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCI 245
+H+ C F + C NE C K+ +E H C + C C + R ++ H +
Sbjct: 117 KHLKECKFTFVSCEYNEKCG-KYRMNEIENHQDQCNYYPTKCFY-CKNDFERMNLSNHLL 174
Query: 246 TVCQMKLANCPFYAVGCQSTIPQCMIQQH-----RHDDLCSHLLYILQKLHRD--KPLKV 298
C + + C + GC T P+ + +H H S+++ Q L + K LK
Sbjct: 175 LDCPLVIIGCRYKDGGCNETFPRHELSKHLALEDNHQQYISNIINGHQSLLKSTSKQLKQ 234
Query: 299 LKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKED 340
L++ EELE KL + + IK A FKE+
Sbjct: 235 LRSSCEELET----KLINNDYSFNGRWIIKQFSAHFDLFKEN 272
>DICTYBASE|DDB_G0273435 [details] [associations]
symbol:DDB_G0273435 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
dictyBase:DDB_G0273505 dictyBase:DDB_G0273435 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AAFI02000010 SUPFAM:SSF49599
eggNOG:NOG289765 RefSeq:XP_644617.1 RefSeq:XP_644633.1
ProteinModelPortal:Q557K2 EnsemblProtists:DDB0168209
EnsemblProtists:DDB0217166 GeneID:8618981 GeneID:8618996
KEGG:ddi:DDB_G0273435 KEGG:ddi:DDB_G0273505 InParanoid:Q557K2
OMA:GERINDC ProtClustDB:CLSZ2431245 Uniprot:Q557K2
Length = 409
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/162 (25%), Positives = 67/162 (41%)
Query: 187 EHMLHCGFISMICP-NEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCI 245
+H+ C F + C NE C K+ +E H C + C C + R ++ H +
Sbjct: 117 KHLKECKFTFVSCEYNEKCG-KYRMNEIENHQDQCNYYPTKCFY-CKNDFERMNLSNHLL 174
Query: 246 TVCQMKLANCPFYAVGCQSTIPQCMIQQH-----RHDDLCSHLLYILQKLHRD--KPLKV 298
C + + C + GC T P+ + +H H S+++ Q L + K LK
Sbjct: 175 LDCPLVIIGCRYKDGGCNETFPRHELSKHLALEDNHQQYISNIINGHQSLLKSTSKQLKQ 234
Query: 299 LKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKED 340
L++ EELE KL + + IK A FKE+
Sbjct: 235 LRSSCEELET----KLINNDYSFNGRWIIKQFSAHFDLFKEN 272
>DICTYBASE|DDB_G0288285 [details] [associations]
symbol:mybX "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
dictyBase:DDB_G0288285 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GenomeReviews:CM000154_GR SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000109 RefSeq:XP_636792.1 HSSP:P32591
ProteinModelPortal:Q54J55 PRIDE:Q54J55 EnsemblProtists:DDB0220513
GeneID:8626549 KEGG:ddi:DDB_G0288285 eggNOG:COG5259 OMA:WDLINCF
Uniprot:Q54J55
Length = 1620
Score = 138 (53.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/155 (27%), Positives = 77/155 (49%)
Query: 375 SEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEED 434
+E+ K + T+ NEKE K NE K NE+E +++ + + K E K K ++++
Sbjct: 687 NEKEKEDKTENGNEKENEKENEKENE--KENEKENENEKENENEKENENKKEKEKENKKE 744
Query: 435 RIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVR 494
++ + V+ + ID IN + +++EE++ K + E+V E K D K N+EV
Sbjct: 745 NENENEKVDEKIEIDKEGINEDEKMDEEKEEKINNK-KEDEEVESEIK-KDKLKENEEVE 802
Query: 495 AS-EGRKVSEERNINEGKTNGVRVNEEEKINAEGK 528
EG E + E + + + E+E+ + K
Sbjct: 803 GEIEGEN-DEGEVVEEDEDEEMEIEEDEEDEEDEK 836
Score = 138 (53.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 62/255 (24%), Positives = 108/255 (42%)
Query: 286 ILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE-DTVNR 344
IL+ L+ K + K +E ++K DK E D +K+ E+K KE D +
Sbjct: 1038 ILEILNDPKYQQPSKEELERIQKEKDDK--EKEDKEK---ELKEKESKEKELKEKDDKEK 1092
Query: 345 YSXXXXXXXXXXXXXXXPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKG 404
+ + ++ E EE K DK E++K + K E K
Sbjct: 1093 EKEKELKEREDKEKEEDKEAKDKVDKE---KEEDK-QKQDKEKEEDK-EKQEKDKEEDKD 1147
Query: 405 NEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQK 464
E+E++ + KEG EGK+ K +ED+ +E++ G D N T +E +
Sbjct: 1148 KEKEENKEDKEKEGTDKEGKDKEDKEIKEDKEKEEKDKEAIGDHDKSDSTNTT-TTKEME 1206
Query: 465 ANEPGKVTKGEKVSEEGKANDTGKVN-KEVRASEGRKVSEERNI----NEGKTNGVRVNE 519
+ T K + E +D K++ KE + ++ + ++EE N N+ N N+
Sbjct: 1207 IEKQDSSTSTNKETVEMNQDDHVKIDEKETKENDKKSITEEENQQKDDNDNNNNSHNHNK 1266
Query: 520 E-EKINAEGKVNGRD 533
E EK + + N ++
Sbjct: 1267 EIEKDDNKENENEKE 1281
Score = 134 (52.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 46/159 (28%), Positives = 83/159 (52%)
Query: 375 SEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEED 434
SE+ +IN D NE EK +K K NE K ++K +G+ KE + K N K +E++
Sbjct: 666 SEDKEIN--DDHNENEK-QDKDKENEKEK---EDKTENGNEKENEKENEKEN-EKENEKE 718
Query: 435 RIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVR 494
++++N N + + K E + N+++ NE KV + ++ +EG N+ K+++E
Sbjct: 719 NENEKENENEKE--NENKKEKE-KENKKENENENEKVDEKIEIDKEG-INEDEKMDEEKE 774
Query: 495 ASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
K +E +E K + ++ NEE EG++ G +
Sbjct: 775 EKINNKKEDEEVESEIKKDKLKENEE----VEGEIEGEN 809
Score = 129 (50.5 bits), Expect = 0.00023, P = 0.00023
Identities = 56/251 (22%), Positives = 108/251 (43%)
Query: 288 QKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTV---NR 344
+K +K K + + ++ EK + E + + ++ E K K+D N
Sbjct: 514 EKEKEEKEEKEKQEKEDDKEKQENENEQEKIEKKENKNDSQNKEIKENHDKKDETTDSNN 573
Query: 345 YSXXXXXXXXXXXXXXXPDGEGTINGEVNISE-EGKINATDKVNEKEKI-SNKSKPNEGG 402
+ + + + E + ++ E K + +KE + ++ +K N G
Sbjct: 574 TTTTTTTTTTTSTNTLVAESSSSSSTETDDNDKEMKEQPVQENKDKEMMETDTTKENNGV 633
Query: 403 KGNE---QEKDSDGDVKEGKFTEGKNNGRKVSEEDR-IHDEQNVNREGTIDGGKINNETR 458
+ E Q DS KE K N ++ S ED+ I+D+ N N + D K N + +
Sbjct: 634 ETTETTNQTTDSIETDKEMKDQPIINLEKEKSSEDKEINDDHNENEKQ--DKDKENEKEK 691
Query: 459 VNEEQKANEPGKVTKGEKVSEEG--KANDTGKVNKEVRASEGRKVSEERNINEGKTNGVR 516
++ + NE + EK +E+ K N+ K N+ + +E +K E+ N E + +
Sbjct: 692 EDKTENGNEKENEKENEKENEKENEKENENEKENENEKENENKKEKEKENKKENENENEK 751
Query: 517 VNEEEKINAEG 527
V+E+ +I+ EG
Sbjct: 752 VDEKIEIDKEG 762
>UNIPROTKB|C9JJ10 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR027138 PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 EMBL:AC010761
HGNC:HGNC:12034 ChiTaRS:TRAF4 PANTHER:PTHR10131:SF46
IPI:IPI00791505 ProteinModelPortal:C9JJ10 SMR:C9JJ10 STRING:C9JJ10
Ensembl:ENST00000422344 HOGENOM:HOG000128105 ArrayExpress:C9JJ10
Bgee:C9JJ10 Uniprot:C9JJ10
Length = 182
Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/68 (36%), Positives = 31/68 (45%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
I I EGC HL+ H + C F +IPC +CP L RRD+ H C +
Sbjct: 88 IRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLK 147
Query: 255 CPFYAVGC 262
C F GC
Sbjct: 148 CEF--CGC 153
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 137 (53.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 32/117 (27%), Positives = 49/117 (41%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C F + L +HM H CG + C N C + + H+ +CP + CE C
Sbjct: 167 CQGSFPKSR-LEKHMEHECGRRKIFCDN--CGLAMAYEDMSGHELICPLAYVTCEY-CQT 222
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
L+R M H C M C +Y GC + + + +H D +H+ + Q L
Sbjct: 223 NLIREQMPSHYSMDCTMAPIPCMYYEFGCTEKMQRNDLARHLQDFTQAHMRMMFQTL 279
Score = 39 (18.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 478 SEEGKANDTGKVNKEVRASEGRKVSEERNINE 509
S + + +T + + + EGR V ++ I E
Sbjct: 318 SHQDCSQETRNLRETIEQLEGRLVRQDHQIRE 349
>UNIPROTKB|F1PMX5 [details] [associations]
symbol:CYLC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005200 "structural constituent of
cytoskeleton" evidence=IEA] InterPro:IPR026189 GO:GO:0005200
PANTHER:PTHR16742 GeneTree:ENSGT00690000102102 EMBL:AAEX03008007
Ensembl:ENSCAFT00000004125 Uniprot:F1PMX5
Length = 396
Score = 129 (50.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 55/253 (21%), Positives = 114/253 (45%)
Query: 289 KLHRDKPLK---VLKNRVEELEKSYFDKLAEAPDVRS-LSFAIKDLEAKLGPFKEDTVNR 344
K+ + KP+K + + E + + D E D++ A + + K GP KE +
Sbjct: 150 KITKTKPMKDRDIERGTKGEKDVAKTDAKKEKKDLKKGKESATESEDEKKGPKKESKKEK 209
Query: 345 YSXXXXXXXXXXXXXXXPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKG 404
+ + E S++ K +AT+ +EK+ + K ++ KG
Sbjct: 210 KASKKGKESATESEDEKKGTKKDAKKEKKGSKKSKESATESEDEKKDAKKEKKGSKKSKG 269
Query: 405 NEQE-KDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTI-DGGKINNETRVNEE 462
+ E +D D K K +GK + +K+ E+D +Q+ +++G D K ++ +E
Sbjct: 270 STIESEDEKKDAKMDK--DGKKDSKKLGEKD----DQSKDKKGPKKDTKKKGSKKDKKDE 323
Query: 463 QKANEPGKVTKGE--KVSEEGKAND---TGKVNKEVRASEGRKVSEERNI--NEGKTNGV 515
+KA+ TK + K +++G D GK + + +++ +K +++++ NE K N
Sbjct: 324 KKASGTDIETKDDAKKGAKKGSKKDGKKDGKKDTDTESADAKKDAKKKDAKKNEAKKNTK 383
Query: 516 RVNEEEKINAEGK 528
+ +++ GK
Sbjct: 384 KDSDKSNERKSGK 396
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 42/170 (24%), Positives = 80/170 (47%)
Query: 371 EVNISEEGKINATDKVNEKEKISNKSKPNEGG--KGNE---QEKDSDGDVKEGKFTEGKN 425
E S++GK +AT+ +EK+ +K + G K E + +D D K+ K K+
Sbjct: 208 EKKASKKGKESATESEDEKKGTKKDAKKEKKGSKKSKESATESEDEKKDAKKEKKGSKKS 267
Query: 426 NGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVS--EEGKA 483
G + ED D + ++++G D K+ + ++++K + KG K +E KA
Sbjct: 268 KGSTIESEDEKKDAK-MDKDGKKDSKKLGEKDDQSKDKKGPKKDTKKKGSKKDKKDEKKA 326
Query: 484 NDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
+ T K+ A +G K ++ +GK +G + + E +A+ +D
Sbjct: 327 SGTDIETKD-DAKKGAKKGSKK---DGKKDGKKDTDTESADAKKDAKKKD 372
>UNIPROTKB|F1RNA8 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 GO:GO:0004842 SUPFAM:SSF49599
Gene3D:3.90.890.10 OMA:EAFESHE PANTHER:PTHR10131:SF46 EMBL:FP016171
Ensembl:ENSSSCT00000019347 Uniprot:F1RNA8
Length = 423
Score = 132 (51.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 29/105 (27%), Positives = 48/105 (45%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +F ++ H CP +PC +C T+ R D+ H C L CPF GC
Sbjct: 151 CTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFKDSGC 210
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 211 KHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 255
Score = 125 (49.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 70 CPTKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGA 126
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
+MRR + +H + C + C + C IQ H++ C L
Sbjct: 127 RMMRRLLAQHATSECPKRTQPCTY----CTKEFVFDTIQSHQYQ--CPRL 170
Score = 122 (48.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 28/85 (32%), Positives = 37/85 (43%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H + C F ++PC +CP L R
Sbjct: 18 KIYPDPELEVQVLGLP-IRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSR 76
Query: 238 RDMDRHCITVCQMKLANCPFYAVGC 262
RD+ H C + C F GC
Sbjct: 77 RDLPAHLQHDCPKRRLKCEF--CGC 99
Score = 40 (19.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 311 FDKLAEAPDVRSLSFAIKD 329
FD L E P R ++F++ D
Sbjct: 327 FDNLLEWPFARRVTFSLLD 345
>GENEDB_PFALCIPARUM|PFB0680w [details] [associations]
symbol:PFB0680w "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020011 "apicoplast" evidence=RCA] EMBL:AE001362
GenomeReviews:AE001362_GR RefSeq:XP_001349654.2
ProteinModelPortal:O96229 IntAct:O96229 MINT:MINT-1641190
EnsemblProtists:PFB0680w:mRNA GeneID:812736 KEGG:pfa:PFB0680w
EuPathDB:PlasmoDB:PF3D7_0214900 ProtClustDB:CLSZ2848507
Uniprot:O96229
Length = 950
Score = 138 (53.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 47/180 (26%), Positives = 86/180 (47%)
Query: 363 DGEGTINGEVNISEEGKINATD--KVNEKEKISNKSKP--NEGGKGNEQEKDSDG----D 414
D NG I E+ KIN +D + NE S K++ N+ KG + +S+ D
Sbjct: 115 DDNNNNNGTKQIEEKNKINKSDLHRQNELNLQSGKNEQDINKNEKGKQDISNSNAENKKD 174
Query: 415 VKEG-KFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTK 473
VKEG K E K K+S++ ++ +E + + ++ K +++ +V EE K ++ K+ +
Sbjct: 175 VKEGVKELEEKKKEEKISDDHKV-EENKKSDDHKVEENKKSDDHKV-EENKKSDDHKIEE 232
Query: 474 GEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
+KV E + + K K+ SE + E ++ N+ + + +E + E N D
Sbjct: 233 VKKVEEHEEDEEEDKKEKK---SENKNKDENKDENDEDNDEISDEDEVDDDVEEDKNEND 289
Score = 137 (53.3 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 43/150 (28%), Positives = 66/150 (44%)
Query: 384 DKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGK---NNGRKVSEEDRIHDEQ 440
DK EKEK + +K E K E+EK D + + K + K +N +K +++ IHD+
Sbjct: 382 DKDIEKEKSKDTAKEKEKDKDIEKEKSKDMEKLKNKQNDEKKKDDNEKKKNDKQDIHDDN 441
Query: 441 NVNR--EGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEG 498
+ E + +E E +K + GK E +E G N N+ +E
Sbjct: 442 DDENDMEEIEENDDEEDEDEDMENKKKKKKGK-NGNENGNENGSENGNENGNENGNENEN 500
Query: 499 RKVSEERNINEGKTNGVRVNEEEKINAEGK 528
+ SE N NE + NE EK N + K
Sbjct: 501 KNESENENENENENENGNENENEKENEKDK 530
Score = 129 (50.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 43/161 (26%), Positives = 69/161 (42%)
Query: 376 EEGKINATDKVN--EKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEE 433
E+GK +K EKEK +K E K +EK+ D D+++ K + + K ++E
Sbjct: 362 EKGKDKEKEKSKDIEKEKEKDKDIEKEKSKDTAKEKEKDKDIEKEKSKDMEKLKNKQNDE 421
Query: 434 DRIHD-EQNVNREGTI--DGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK-ANDTGKV 489
+ D E+ N + I D N+ + E + + + +K ++GK N+ G
Sbjct: 422 KKKDDNEKKKNDKQDIHDDNDDENDMEEIEENDDEEDEDEDMENKKKKKKGKNGNENGNE 481
Query: 490 NKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVN 530
N +E +E N NE K NE E N G N
Sbjct: 482 NGSENGNENG--NENGNENENKNESENENENENENENGNEN 520
Score = 43 (20.2 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 16/108 (14%), Positives = 46/108 (42%)
Query: 85 VAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMS-SEKREDRIDDFLQ 143
+ E + ++ +++ S+ P+ I + +D N ++ + + + FLQ
Sbjct: 32 IVEDINIKKEEKSS-SEPPFIPIKNKIDNVHTKNNNQYNLHNNKSNKTHLTYGTHTSFLQ 90
Query: 144 EMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLH 191
I+ ++ +++ + + K D N + + + ++N+ LH
Sbjct: 91 NCTINDCVDVDNKDSEINNITKEKDDNNNNNGTKQIEEKNKINKSDLH 138
>UNIPROTKB|O96229 [details] [associations]
symbol:RON6 "Rhoptry neck protein 6" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0020011 "apicoplast" evidence=RCA] EMBL:AE001362
GenomeReviews:AE001362_GR RefSeq:XP_001349654.2
ProteinModelPortal:O96229 IntAct:O96229 MINT:MINT-1641190
EnsemblProtists:PFB0680w:mRNA GeneID:812736 KEGG:pfa:PFB0680w
EuPathDB:PlasmoDB:PF3D7_0214900 ProtClustDB:CLSZ2848507
Uniprot:O96229
Length = 950
Score = 138 (53.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 47/180 (26%), Positives = 86/180 (47%)
Query: 363 DGEGTINGEVNISEEGKINATD--KVNEKEKISNKSKP--NEGGKGNEQEKDSDG----D 414
D NG I E+ KIN +D + NE S K++ N+ KG + +S+ D
Sbjct: 115 DDNNNNNGTKQIEEKNKINKSDLHRQNELNLQSGKNEQDINKNEKGKQDISNSNAENKKD 174
Query: 415 VKEG-KFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTK 473
VKEG K E K K+S++ ++ +E + + ++ K +++ +V EE K ++ K+ +
Sbjct: 175 VKEGVKELEEKKKEEKISDDHKV-EENKKSDDHKVEENKKSDDHKV-EENKKSDDHKIEE 232
Query: 474 GEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
+KV E + + K K+ SE + E ++ N+ + + +E + E N D
Sbjct: 233 VKKVEEHEEDEEEDKKEKK---SENKNKDENKDENDEDNDEISDEDEVDDDVEEDKNEND 289
Score = 137 (53.3 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 43/150 (28%), Positives = 66/150 (44%)
Query: 384 DKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGK---NNGRKVSEEDRIHDEQ 440
DK EKEK + +K E K E+EK D + + K + K +N +K +++ IHD+
Sbjct: 382 DKDIEKEKSKDTAKEKEKDKDIEKEKSKDMEKLKNKQNDEKKKDDNEKKKNDKQDIHDDN 441
Query: 441 NVNR--EGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEG 498
+ E + +E E +K + GK E +E G N N+ +E
Sbjct: 442 DDENDMEEIEENDDEEDEDEDMENKKKKKKGK-NGNENGNENGSENGNENGNENGNENEN 500
Query: 499 RKVSEERNINEGKTNGVRVNEEEKINAEGK 528
+ SE N NE + NE EK N + K
Sbjct: 501 KNESENENENENENENGNENENEKENEKDK 530
Score = 129 (50.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 43/161 (26%), Positives = 69/161 (42%)
Query: 376 EEGKINATDKVN--EKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEE 433
E+GK +K EKEK +K E K +EK+ D D+++ K + + K ++E
Sbjct: 362 EKGKDKEKEKSKDIEKEKEKDKDIEKEKSKDTAKEKEKDKDIEKEKSKDMEKLKNKQNDE 421
Query: 434 DRIHD-EQNVNREGTI--DGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK-ANDTGKV 489
+ D E+ N + I D N+ + E + + + +K ++GK N+ G
Sbjct: 422 KKKDDNEKKKNDKQDIHDDNDDENDMEEIEENDDEEDEDEDMENKKKKKKGKNGNENGNE 481
Query: 490 NKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVN 530
N +E +E N NE K NE E N G N
Sbjct: 482 NGSENGNENG--NENGNENENKNESENENENENENENGNEN 520
Score = 43 (20.2 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 16/108 (14%), Positives = 46/108 (42%)
Query: 85 VAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMS-SEKREDRIDDFLQ 143
+ E + ++ +++ S+ P+ I + +D N ++ + + + FLQ
Sbjct: 32 IVEDINIKKEEKSS-SEPPFIPIKNKIDNVHTKNNNQYNLHNNKSNKTHLTYGTHTSFLQ 90
Query: 144 EMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLH 191
I+ ++ +++ + + K D N + + + ++N+ LH
Sbjct: 91 NCTINDCVDVDNKDSEINNITKEKDDNNNNNGTKQIEEKNKINKSDLH 138
>UNIPROTKB|J9JIG0 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] InterPro:IPR001293 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR027138 PROSITE:PS50145 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
EMBL:AC010761 HGNC:HGNC:12034 ChiTaRS:TRAF4 PANTHER:PTHR10131:SF46
Ensembl:ENST00000454852 Uniprot:J9JIG0
Length = 112
Score = 107 (42.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H + C F +IPC +CP L R
Sbjct: 17 KIYPDPELEVQVLGLP-IRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSR 75
Query: 238 RDMDRH 243
RD+ H
Sbjct: 76 RDLPAH 81
>UNIPROTKB|K7GKZ2 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR027138 PROSITE:PS50145
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00550000074359
PANTHER:PTHR10131:SF46 EMBL:FP016171 Ensembl:ENSSSCT00000035872
Uniprot:K7GKZ2
Length = 265
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 70 CPTKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGA 126
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
+MRR + +H + C + C + C IQ H++ C L
Sbjct: 127 RMMRRLLAQHATSECPKRTQPCTY----CTKEFVFDTIQSHQYQ--CPRL 170
Score = 122 (48.0 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 28/85 (32%), Positives = 37/85 (43%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H + C F ++PC +CP L R
Sbjct: 18 KIYPDPELEVQVLGLP-IRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSR 76
Query: 238 RDMDRHCITVCQMKLANCPFYAVGC 262
RD+ H C + C F GC
Sbjct: 77 RDLPAHLQHDCPKRRLKCEF--CGC 99
>DICTYBASE|DDB_G0290883 [details] [associations]
symbol:DDB_G0290883 "TRAF-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 Pfam:PF00917 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
dictyBase:DDB_G0290883 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
eggNOG:NOG321306 ProtClustDB:CLSZ2429617 EMBL:AAFI02000171
RefSeq:XP_635511.1 ProteinModelPortal:Q54FG0
EnsemblProtists:DDB0238325 GeneID:8627878 KEGG:ddi:DDB_G0290883
OMA:HISECEN Uniprot:Q54FG0
Length = 460
Score = 129 (50.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/146 (23%), Positives = 67/146 (45%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDT 234
C K + +++ H+++C + + C +GC LE H + C FK++ C+ D
Sbjct: 130 CKEKIEVD-QIDSHLINCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVICDFCKRDD 188
Query: 235 LMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLL---YILQKLH 291
+ +++++ H T C M +C + GC I + I H +D C+ + Y Q
Sbjct: 189 IKKKELETHYKT-CPMVPIDC---SQGCSVKIERKSIIDHIENDCCNTQIPCKYFEQGCK 244
Query: 292 RDKPLKVLKNRVEELE-KSYFDKLAE 316
+ L+N +E + ++Y L +
Sbjct: 245 VEMKRSELQNHLERVNHQTYMGILID 270
>GENEDB_PFALCIPARUM|PFD0950w [details] [associations]
symbol:PFD0950w "ran binding protein 1"
species:5833 "Plasmodium falciparum" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] InterPro:IPR000156
Pfam:PF00638 PROSITE:PS50196 SMART:SM00160 GO:GO:0005525
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006260 GO:GO:0003924
GO:GO:0005622 GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351504.1
HSSP:P43487 ProteinModelPortal:Q76NN6 IntAct:Q76NN6
MINT:MINT-1591311 EnsemblProtists:PFD0950w:mRNA GeneID:812489
KEGG:pfa:PFD0950w EuPathDB:PlasmoDB:PF3D7_0419600 KO:K03864
OMA:YANEESP ProtClustDB:CLSZ2432092 Uniprot:Q76NN6
Length = 280
Score = 125 (49.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 44/210 (20%), Positives = 90/210 (42%)
Query: 290 LHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSXXX 349
L ++K LKV+ N +SY + A + ++ +KD +E + +++
Sbjct: 79 LRQEKTLKVVANHYIYPNESYCKLVPNAGSEKIYAWTVKDFA------EEPKIEQFALKF 132
Query: 350 XXXXXXXXXXXXPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEK 409
D G +N ++ + +G N +KV EK+ K K ++ N++ K
Sbjct: 133 NTADAAKLFKQKFDEAGQVNLKL-LDSQG--NLKEKVEEKKDDDKKEKKDDNSDNNKKTK 189
Query: 410 DSDGDVK------EGKFTEGKNNGRK-VSEEDRIHDEQNVNREGTIDGGKINNETRVNEE 462
+ + + K E K + K N +K V E+D D+ + ++ + E E+
Sbjct: 190 EDEEEKKDKVEKDEKKKEDEKENVKKDVKEDDEEKDKDDKTKDDDTSKDEKEKEVEQKED 249
Query: 463 QKANEPGKVTKGEKVSEEGKANDTGKVNKE 492
K E + K +K S++ K+++ + +E
Sbjct: 250 VKEKEEKEKEKDDKRSDDKKSDEEENIKRE 279
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 40/163 (24%), Positives = 76/163 (46%)
Query: 373 NISEEGKINATD-KVNEKEKISN-KSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKV 430
+ +EE KI K N + K K +E G+ N + DS G++KE K E K++ +K
Sbjct: 118 DFAEEPKIEQFALKFNTADAAKLFKQKFDEAGQVNLKLLDSQGNLKE-KVEEKKDDDKKE 176
Query: 431 SEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEG---KANDTG 487
++D + + + K+ + + E++K N V + ++ ++ K +DT
Sbjct: 177 KKDDNSDNNKKTKEDEEEKKDKVEKDEKKKEDEKENVKKDVKEDDEEKDKDDKTKDDDTS 236
Query: 488 KVNKEVRASEGRKVSE----ERNINEGKTNGVRVNEEEKINAE 526
K KE + V E E+ ++ +++ + +EEE I E
Sbjct: 237 KDEKEKEVEQKEDVKEKEEKEKEKDDKRSDDKKSDEEENIKRE 279
>UNIPROTKB|Q76NN6 [details] [associations]
symbol:PFD0950w "Ran binding protein 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 GO:GO:0005525 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006260 GO:GO:0003924 GO:GO:0005622
GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351504.1 HSSP:P43487
ProteinModelPortal:Q76NN6 IntAct:Q76NN6 MINT:MINT-1591311
EnsemblProtists:PFD0950w:mRNA GeneID:812489 KEGG:pfa:PFD0950w
EuPathDB:PlasmoDB:PF3D7_0419600 KO:K03864 OMA:YANEESP
ProtClustDB:CLSZ2432092 Uniprot:Q76NN6
Length = 280
Score = 125 (49.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 44/210 (20%), Positives = 90/210 (42%)
Query: 290 LHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSXXX 349
L ++K LKV+ N +SY + A + ++ +KD +E + +++
Sbjct: 79 LRQEKTLKVVANHYIYPNESYCKLVPNAGSEKIYAWTVKDFA------EEPKIEQFALKF 132
Query: 350 XXXXXXXXXXXXPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEK 409
D G +N ++ + +G N +KV EK+ K K ++ N++ K
Sbjct: 133 NTADAAKLFKQKFDEAGQVNLKL-LDSQG--NLKEKVEEKKDDDKKEKKDDNSDNNKKTK 189
Query: 410 DSDGDVK------EGKFTEGKNNGRK-VSEEDRIHDEQNVNREGTIDGGKINNETRVNEE 462
+ + + K E K + K N +K V E+D D+ + ++ + E E+
Sbjct: 190 EDEEEKKDKVEKDEKKKEDEKENVKKDVKEDDEEKDKDDKTKDDDTSKDEKEKEVEQKED 249
Query: 463 QKANEPGKVTKGEKVSEEGKANDTGKVNKE 492
K E + K +K S++ K+++ + +E
Sbjct: 250 VKEKEEKEKEKDDKRSDDKKSDEEENIKRE 279
Score = 115 (45.5 bits), Expect = 0.00065, P = 0.00065
Identities = 40/163 (24%), Positives = 76/163 (46%)
Query: 373 NISEEGKINATD-KVNEKEKISN-KSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKV 430
+ +EE KI K N + K K +E G+ N + DS G++KE K E K++ +K
Sbjct: 118 DFAEEPKIEQFALKFNTADAAKLFKQKFDEAGQVNLKLLDSQGNLKE-KVEEKKDDDKKE 176
Query: 431 SEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEG---KANDTG 487
++D + + + K+ + + E++K N V + ++ ++ K +DT
Sbjct: 177 KKDDNSDNNKKTKEDEEEKKDKVEKDEKKKEDEKENVKKDVKEDDEEKDKDDKTKDDDTS 236
Query: 488 KVNKEVRASEGRKVSE----ERNINEGKTNGVRVNEEEKINAE 526
K KE + V E E+ ++ +++ + +EEE I E
Sbjct: 237 KDEKEKEVEQKEDVKEKEEKEKEKDDKRSDDKKSDEEENIKRE 279
>UNIPROTKB|J9NUC9 [details] [associations]
symbol:HMGN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031492 "nucleosomal DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR000079 Pfam:PF01101
PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527 GO:GO:0005634
GO:GO:0000785 GO:GO:0031492 GeneTree:ENSGT00690000102194
EMBL:AAEX03026575 Ensembl:ENSCAFT00000044595 OMA:DEMEENT
Uniprot:J9NUC9
Length = 287
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 46/139 (33%), Positives = 63/139 (45%)
Query: 370 GEVNISEEGKINATDKVNEK-EKISNKSKPNEGGKGNEQEKDSD-GDVKEGKFTEGKNNG 427
G+ E+GK K EK EK + K E+EK+ GD KEG+ +GK G
Sbjct: 150 GDRKKDEDGKGKGDGKEEEKKEKNGEEGKGKGANSKEEEEKEKKKGDEKEGE--DGKGKG 207
Query: 428 RKVSE--------EDRIHDEQNVNREGTID-GGKINNETRVNEEQKANEPGKVTKGEKVS 478
V E E + D++ N +G +D GK E R N+E+ N+ G K E +
Sbjct: 208 EDVKEFENEKDTGEKKQGDDRKENEDGRVDKDGK--EEKRGNKEEVGNKKGGKEKEEDGA 265
Query: 479 EE-----GKANDTGKVNKE 492
EE GK GK NK+
Sbjct: 266 EENGNGDGKDGRNGKENKK 284
Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 46/162 (28%), Positives = 71/162 (43%)
Query: 376 EEGKINATDKVNEKEKISNKSK----PNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVS 431
E+ K ++ +EKE K K +E GKG K+ + K G+ EGK G
Sbjct: 128 EDQKKRTENREDEKEYKDKKGKGDRKKDEDGKGKGDGKEEEKKEKNGE--EGKGKGANSK 185
Query: 432 EEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNK 491
EE+ ++ +EG GK E+ K E K T +K ++ K N+ G+V+K
Sbjct: 186 EEEEKEKKKGDEKEGEDGKGK-------GEDVKEFENEKDTGEKKQGDDRKENEDGRVDK 238
Query: 492 EVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
+ + E R EE G G + EE+ G +G+D
Sbjct: 239 DGK-EEKRGNKEE----VGNKKGGKEKEEDGAEENGNGDGKD 275
>UNIPROTKB|F6RJL7 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=IEA] [GO:0050699 "WW domain
binding" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030323 "respiratory tube development"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007585 "respiratory gaseous exchange" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 GO:GO:0046330
GO:GO:0045860 GO:GO:0007585 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073
Gene3D:3.90.890.10 GO:GO:0030323 GeneTree:ENSGT00550000074359
OMA:EAFESHE PANTHER:PTHR10131:SF46 EMBL:DAAA02048606
IPI:IPI00686516 UniGene:Bt.8676 ProteinModelPortal:F6RJL7
Ensembl:ENSBTAT00000056164 Uniprot:F6RJL7
Length = 470
Score = 132 (51.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 29/105 (27%), Positives = 48/105 (45%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +F ++ H CP +PC +C T+ R D+ H C L CPF GC
Sbjct: 198 CTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFKDSGC 257
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 258 KHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 125 (49.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 117 CPAKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
+MRR + +H + C + C + C IQ H++ C L
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY----CTKEFVFDTIQSHQYQ--CPRL 217
Score = 123 (48.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 28/85 (32%), Positives = 37/85 (43%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H + C F ++PC +CP L R
Sbjct: 65 KIYPDPELEVQVLGLS-IRCIHSEEGCRWNGPLRHLQGHLNTCSFNVVPCPNRCPAKLSR 123
Query: 238 RDMDRHCITVCQMKLANCPFYAVGC 262
RD+ H C + C F GC
Sbjct: 124 RDLPAHLQHDCPKRRLKCEF--CGC 146
Score = 40 (19.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 311 FDKLAEAPDVRSLSFAIKD 329
FD L E P R ++F++ D
Sbjct: 374 FDNLLEWPFARRVTFSLLD 392
>GENEDB_PFALCIPARUM|PF11_0477 [details] [associations]
symbol:PF11_0477 "CCAAT-box DNA binding protein
subunit B" species:5833 "Plasmodium falciparum" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AE014186 HSSP:P25208
RefSeq:XP_001348144.1 ProteinModelPortal:Q8IHQ2 SMR:Q8IHQ2
IntAct:Q8IHQ2 MINT:MINT-1610835 EnsemblProtists:PF11_0477:mRNA
GeneID:811020 KEGG:pfa:PF11_0477 EuPathDB:PlasmoDB:PF3D7_1146600
OMA:TNETNQT Uniprot:Q8IHQ2
Length = 1301
Score = 124 (48.7 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 43/173 (24%), Positives = 72/173 (41%)
Query: 368 INGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEK-----DSDGDVK--EGKF 420
IN NI+ IN D +N + I+N N N+ ++ D + K E +F
Sbjct: 431 INNNDNINNNDNINNNDNINNNDNINNNINNNNNNNNNDDDEIYKPGDDENSNKMYETQF 490
Query: 421 TEGKNNGRKVSEEDRIHDEQNVN-REGTIDGGKINNETRVNEEQKANEP-GKVTKGEKVS 478
+ K K+S D + + N ++ ID NN + EE+ + E + EK++
Sbjct: 491 NDSKIKS-KISYNDNVDKLDSYNLKDFFID----NNNYNMKEEKYSKESINNINSDEKMN 545
Query: 479 EEGKAND-TGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVN 530
E ND T K+N K S+ IN + +++E N K++
Sbjct: 546 ERNFINDKTNKINNS--NCNNNKDSDSNYINLINNGNILIDQENYPNDNTKID 596
Score = 59 (25.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 145 MEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHC 192
+E SG IN E +I+ N+ +E HC+ N+EKE+ ++C
Sbjct: 20 LERSG--DINMIEPNNNIMNDNIYRLDEIHCSNNINNEKEVGN--IYC 63
>ZFIN|ZDB-GENE-030131-5735 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:7955 "Danio rerio" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0045672 "positive regulation of osteoclast
differentiation" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISS] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0046849 "bone
remodeling" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009617 "response to bacterium" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0045087 "innate immune response" evidence=IMP]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-030131-5735
GO:GO:0005737 GO:GO:0007165 GO:GO:0045893 GO:GO:0009617
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 GO:GO:0045087
GO:GO:0009615 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OrthoDB:EOG4320XV
PANTHER:PTHR10131:SF48 EMBL:AY616583 EMBL:AL929208 EMBL:BC055214
EMBL:BC171483 EMBL:BC171487 IPI:IPI00610824 RefSeq:NP_001038217.1
UniGene:Dr.74618 ProteinModelPortal:Q6IWL4 SMR:Q6IWL4 STRING:Q6IWL4
Ensembl:ENSDART00000038273 GeneID:554561 KEGG:dre:554561
InParanoid:Q7SXX1 OMA:NECGAVM NextBio:20880774 Bgee:Q6IWL4
Uniprot:Q6IWL4
Length = 542
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 38/138 (27%), Positives = 56/138 (40%)
Query: 185 LNEHML-HCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L+EH HC M CP+ C F + H+ CPF CE C L+R + H
Sbjct: 175 LDEHKSQHCLQRIMTCPD--CAGSFVYAVKQNHEQFCPFANTVCEY-CEMELIRDQLALH 231
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLK--VLKN 301
C T C C F GC+ + + + QH + H+ Y+ + L R + L + +
Sbjct: 232 CDTDCLKAPVACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFL-RSQTLNNCTMPS 290
Query: 302 RVEELEKSYFDKLAEAPD 319
L A +PD
Sbjct: 291 AAAHLSSDDRGASARSPD 308
>DICTYBASE|DDB_G0289935 [details] [associations]
symbol:gtf3C5 "transcription factor IIIC-epsilon
subunit" species:44689 "Dictyostelium discoideum" [GO:0000127
"transcription factor TFIIIC complex" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0289935
GO:GO:0003677 GO:GO:0006351 GenomeReviews:CM000154_GR
EMBL:AAFI02000149 KO:K15202 eggNOG:NOG311463 GO:GO:0000127
InterPro:IPR019136 Pfam:PF09734 RefSeq:XP_635991.1 STRING:Q54GS8
PRIDE:Q54GS8 EnsemblProtists:DDB0231091 GeneID:8627406
KEGG:ddi:DDB_G0289935 OMA:GLEYPAN Uniprot:Q54GS8
Length = 865
Score = 131 (51.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 39/161 (24%), Positives = 74/161 (45%)
Query: 375 SEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEED 434
S + N + N K+ I NK K N + E ++D + +E K +N K +
Sbjct: 397 SNQPSKNNNNNNNNKDSIKNKEKDNSNKEDKEHKEDKEDKQEEDKENNETDNNEK---SN 453
Query: 435 RIHDEQNVNREGTIDGGKINNETRVNEEQKANEPG---KVTKGEKVSEEGKANDTGKVNK 491
+I +E N + T DGG+ N + E++ NE G + G+++ + K ++ G+ N
Sbjct: 454 KIDEESRDNTKNT-DGGEDKNNKNIVEKKNNNEKGDDNNIDDGDEIMKN-KEDENGEGNN 511
Query: 492 EVRASEGRK--VSEERNINEGKTNGVRVNEEEKINAEGKVN 530
+ K VSE + + G + ++ + ++ E K+N
Sbjct: 512 NNNNNNNNKEGVSEVQKLGRGHKDE-KLIIQNGVSGETKIN 551
>UNIPROTKB|F6SA91 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50145
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 EMBL:AC010761 HGNC:HGNC:12034 HOVERGEN:HBG103438
ChiTaRS:TRAF4 PANTHER:PTHR10131:SF46 IPI:IPI00791505
ProteinModelPortal:F6SA91 Ensembl:ENST00000444415 Uniprot:F6SA91
Length = 437
Score = 127 (49.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 33/110 (30%), Positives = 49/110 (44%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
+MRR + +H + C + C + C IQ H++ C L
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY----CTKEFVFDTIQSHQYQ--CPRL 217
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +F ++ H CP + C +C T+ R D+ H C L CPF GC
Sbjct: 198 CTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFKDSGC 257
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 258 KHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 121 (47.7 bits), Expect = 0.00032, P = 0.00032
Identities = 29/85 (34%), Positives = 37/85 (43%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H + C F +IPC +CP L R
Sbjct: 65 KIYPDPELEVQVLGLP-IRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSR 123
Query: 238 RDMDRHCITVCQMKLANCPFYAVGC 262
RD+ H C + C F GC
Sbjct: 124 RDLPAHLQHDCPKRRLKCEF--CGC 146
>UNIPROTKB|J9NVS6 [details] [associations]
symbol:CYLC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005200 "structural constituent of
cytoskeleton" evidence=IEA] InterPro:IPR026189 GO:GO:0005200
PANTHER:PTHR16742 GeneTree:ENSGT00690000102102 EMBL:AAEX03008007
Ensembl:ENSCAFT00000043219 Uniprot:J9NVS6
Length = 444
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 55/232 (23%), Positives = 99/232 (42%)
Query: 305 ELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSXXXXXXXXXXXXXXXPDG 364
E EK K +AP + A + + K GP KE ++ +
Sbjct: 219 EDEKKGPKKEKKAPK-KGKESATESEDEKKGPKKERKASKKGKESATESEDEKKGPKKEK 277
Query: 365 EGTINGEVNISE-EGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEG 423
+ + G+ + +E E + T K +KEK +K K E +E EK D K+ K
Sbjct: 278 KASKKGKESATESEDEKKGTKKDAKKEKKGSK-KSKESATESEDEKK---DAKKEKKGSK 333
Query: 424 KNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVS--EEG 481
K+ G + ED D + ++++G D K+ + ++++K + KG K +E
Sbjct: 334 KSKGSTIESEDEKKDAK-MDKDGKKDSKKLGEKDDQSKDKKGPKKDTKKKGSKKDKKDEK 392
Query: 482 KANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
KA+ T K+ A +G K ++ +GK +G + + E +A+ +D
Sbjct: 393 KASGTDIETKD-DAKKGAKKGSKK---DGKKDGKKDTDTESADAKKDAKKKD 440
>DICTYBASE|DDB_G0274351 [details] [associations]
symbol:DDB_G0274351 "5'-3' exonuclease
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
dictyBase:DDB_G0274351 GO:GO:0003676 EMBL:AAFI02000012
GO:GO:0005622 eggNOG:NOG12793 SUPFAM:SSF53098 GO:GO:0008408
RefSeq:XP_643898.1 ProteinModelPortal:Q86IW3
EnsemblProtists:DDB0238385 GeneID:8619324 KEGG:ddi:DDB_G0274351
OMA:EKANNHE Uniprot:Q86IW3
Length = 522
Score = 128 (50.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 38/159 (23%), Positives = 77/159 (48%)
Query: 371 EVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKV 430
E ++++ K +K +KEK K K + K ++EK + D+ +G + ++N +++
Sbjct: 31 EKELNKKEKKEKKEKKEKKEKKEKKEKKEKKEKKEKKEKKDENDLDKGCSDKSRDN-KEI 89
Query: 431 SEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKAN-EPGKVTKGEKVSEEGKANDTGKV 489
+ ED+ D+++ ++ D K NNE + E+K N E ++ G+ E + ++
Sbjct: 90 NNEDK-KDKKD--KKDKKDERKENNEKKDKNEKKDNIEIKELNSGKLKENELEDDNNNNN 146
Query: 490 NKEVRASEGRKVSEERNINEGKTNGVRVNEE--EKINAE 526
N ++ + K E N+ + N N + EKI E
Sbjct: 147 NNNIKLEKDNKFKENENLEDNNENDNNDNNDNNEKIIKE 185
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 133 (51.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 40/151 (26%), Positives = 77/151 (50%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGK 424
E + E E G+ N +++ +E+++ S++ + + +E++S+GD +E + E
Sbjct: 1209 ESEVESEAEEDETGE-NTSEEDDEEQESSSEDEEKSESEAEGEEEESEGD-QEDESDEET 1266
Query: 425 NNGRKVSEEDRIHDEQNVNREGTIDGGKI-NNETRVNEEQKANE--PGKVTKGEKVSEEG 481
++ K EE+ +E+ E ++ + +NE NEE++A E PG+ T+ E EEG
Sbjct: 1267 SD--KDEEEEESENEEEEEEESKVEEEEEESNEEEENEEEEAEEEEPGEDTE-EAEDEEG 1323
Query: 482 KANDTGKVNKEVRASEGRKVSEERNINEGKT 512
+ DT + +E E + EE + KT
Sbjct: 1324 EEEDTQEEEQENGDDEEEEEEEEEEKEKTKT 1354
Score = 124 (48.7 bits), Expect = 0.00070, P = 0.00070
Identities = 52/176 (29%), Positives = 78/176 (44%)
Query: 363 DGEGTIN--GEVNISEE--GKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEG 418
+ EG++N E EE G N DK E E +K+ G E + DS+GD E
Sbjct: 933 ESEGSVNERDETEDVEESDGLGNRRDKSEEVEDSDSKTHDKVG----ENDDDSEGD--ED 986
Query: 419 KFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPG-KVTKGEKV 477
T K++ SEE+ +E+ VN T+ NE R EE+K+N+ T +
Sbjct: 987 DDTMIKDS----SEEEESEEEKTVN--DTVTKASSENEER-EEEEKSNDSEVNDTMTKHS 1039
Query: 478 SEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
SE+ + K + AS + EE+N + K + EEEK + K + D
Sbjct: 1040 SEDEEKEKEEKSSDSSNASSEDEEEEEKNGDSAKASSEDEEEEEKSGSSVKASSED 1095
>UNIPROTKB|Q5JSK9 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 SMART:SM00527 GO:GO:0005730 GO:GO:0000785
GO:GO:0031492 EMBL:AL391294 UniGene:Hs.282204 HGNC:HGNC:8013
HOGENOM:HOG000113856 ChiTaRS:HMGN5 EMBL:AL357115 EMBL:AL590810
IPI:IPI00642320 STRING:Q5JSK9 Ensembl:ENST00000447319
Uniprot:Q5JSK9
Length = 201
Score = 119 (46.9 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 47/160 (29%), Positives = 70/160 (43%)
Query: 371 EVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKV 430
E + +E K N K+ E S K + E + G+ KE E KN
Sbjct: 53 EEDYNENAK-NGEAKITEAPA-SEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNE---- 106
Query: 431 SEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGE--KVSEEGKANDTGK 488
EED+ DE++ N E + GK + + + E+ K ++ G KGE K E+GK + GK
Sbjct: 107 -EEDQKEDEEDQNEEKG-EAGKEDKDEKGEEDGKEDKNGN-EKGEDAKEKEDGKKGEDGK 163
Query: 489 VNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGK 528
N E +G EE + E T + NE+ K + K
Sbjct: 164 GNGEDGKEKGEDEKEEEDRKE--TGDGKENEDGKEKGDKK 201
>UNIPROTKB|F1S2U3 [details] [associations]
symbol:F1S2U3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027130
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
Ensembl:ENSSSCT00000016999 OMA:NNELERT Uniprot:F1S2U3
Length = 461
Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 37/139 (26%), Positives = 63/139 (45%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH +C F C C +L+ H+ ++CP + C KC + R ++
Sbjct: 59 KDLKEHASTYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVSCPNKCLQMIPRTEV 116
Query: 241 DRHCITVCQMKLANCPFYAVGC--QSTIPQCMIQQHRHDDLCSHLLYILQK-LHRDKPLK 297
D H + VC +CPF GC + + + H H +H + +L L++ + +
Sbjct: 117 DEH-LAVCPEAEQDCPFKHYGCMVKEKKKRLALMTHIHTHTHTHTIQVLSDTLYKQEQIS 175
Query: 298 VLKNRVEELEKSYFDKLAE 316
L +E+ E S +LAE
Sbjct: 176 DLYKSLEQKE-SKIQQLAE 193
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 197 MICPNE-GCNAKFSAGHLEKHDSVCPFKIIPC-EQKCPDTLMRRDMDRHCITVCQMKLAN 254
+ C N GC AK G + H C F+ + C ++C + ++R+D+ H T CQ +
Sbjct: 16 VFCKNAPGCTAKIILGRYQDHLQQCLFQAVQCCNERCQEPVLRKDLKEHASTYCQFREEK 75
Query: 255 CPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 76 CLY----CKKDVVVINLQNHE-ENLC 96
>UNIPROTKB|E2RG86 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050688 "regulation of defense response to
virus" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
CTD:7187 KO:K03174 OMA:YGCTFQG PANTHER:PTHR10131:SF45
EMBL:AAEX03006032 RefSeq:XP_854615.1 ProteinModelPortal:E2RG86
Ensembl:ENSCAFT00000028719 GeneID:490867 KEGG:cfa:490867
NextBio:20863803 Uniprot:E2RG86
Length = 568
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 45/163 (27%), Positives = 73/163 (44%)
Query: 159 IAHIL--LKNVDFKNEFHCNMKFNSEK----ELNEHMLH-CGFISMICPNEGCNAKFSAG 211
+ H+L LKN E C EK +L +H+ C + CP+ C ++
Sbjct: 130 LGHLLVHLKNDCQFEELSCVRADCKEKVLRRDLRDHVEKACKYREATCPH--CKSQVPMI 187
Query: 212 HLEKH-DSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC--QSTIP 267
L+KH D+ CP ++ C KC TL+R ++ H ++ C + C F GC Q T
Sbjct: 188 TLQKHEDTECPCVVVSCPHKCSVQTLLRSELSAH-LSECVNAPSTCSFKRYGCVFQGTNQ 246
Query: 268 QCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKS 309
Q I+ H H+ + + + +K + +L+N E KS
Sbjct: 247 Q--IKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKS 287
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ + C + C + ++RRD+ H C+
Sbjct: 113 LQIYCRNEGGGCTEQLTLGHLLVHLKNDCQFEELSCVRADCKEKVLRRDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
+ A CP C+S +P +Q+H D C
Sbjct: 173 REATCPH----CKSQVPMITLQKHE-DTEC 197
>UNIPROTKB|F1SSA8 [details] [associations]
symbol:CYLC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA] InterPro:IPR026189 GO:GO:0005200 PANTHER:PTHR16742
GeneTree:ENSGT00690000102102 EMBL:CU571436
Ensembl:ENSSSCT00000005944 Uniprot:F1SSA8
Length = 364
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 37/156 (23%), Positives = 73/156 (46%)
Query: 376 EEGKINATDKVNEKEKISNKSKPNEGG--KGNEQEKDSDGDVKEGKFTEGKNNGRKVSEE 433
++GK +AT+ EK SK ++ G KG E +S+G+ K+ K EGK + +K ++
Sbjct: 209 KKGKESATESEGEKGDAKKDSKKDKKGPKKGKESATESEGEKKDAKDKEGKKDSKKPGDK 268
Query: 434 -DRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKE 492
D D+++ ++ + G K + + + + P K K + + K G +
Sbjct: 269 GDESKDKKDSKKKESKKGKKDEKKPSEADSESKDTPKKDAKKDAKKDAKKDAKKGTEPES 328
Query: 493 VRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGK 528
A + K +++ + K V V++ E +N + K
Sbjct: 329 ADAKKDAKKDAKKDAKKDKD--VEVDDTEFVNTKKK 362
>TAIR|locus:2098443 [details] [associations]
symbol:AT3G28770 "AT3G28770" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
EMBL:CP002686 GenomeReviews:BA000014_GR HSSP:P01096 eggNOG:NOG12793
EMBL:AP002057 InterPro:IPR009605 Pfam:PF06746 IPI:IPI00529324
RefSeq:NP_189519.1 UniGene:At.42736 ProteinModelPortal:Q9LH98
PaxDb:Q9LH98 PRIDE:Q9LH98 EnsemblPlants:AT3G28770.1 GeneID:822509
KEGG:ath:AT3G28770 TAIR:At3g28770 OMA:SKNEILM
ProtClustDB:CLSN2912834 Genevestigator:Q9LH98 Uniprot:Q9LH98
Length = 2081
Score = 134 (52.2 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/166 (27%), Positives = 81/166 (48%)
Query: 369 NGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGR 428
+G EEGK N D + +K K+ NK + ++ +K D +E + G++
Sbjct: 689 DGSSEKGEEGKENNKDSMEDK-KLENKESQTD----SKDDKSVDDKQEEAQIYGGESKDD 743
Query: 429 KVSEEDRIHDEQNVNREGTIDGGKINN-ETRVNEEQKANEPGKVTKGEKV-SEEGKANDT 486
K E E N++ + ++ N E V +K +E KV KGEK S++ K+ +T
Sbjct: 744 KSVEAKGKKKESKENKKTKTNENRVRNKEENVQGNKKESE--KVEKGEKKESKDAKSVET 801
Query: 487 GKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGK-VNG 531
K NK++ ++E R ++ER+ + K + + + + A+ K NG
Sbjct: 802 -KDNKKLSSTENRDEAKERSGEDNKEDKEESKDYQSVEAKEKNENG 846
>UNIPROTKB|K7GN38 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR027130 PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
EMBL:AEMK01103347 EMBL:CU915362 EMBL:FP565698
Ensembl:ENSSSCT00000034241 Uniprot:K7GN38
Length = 232
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 197 MICPNE-GCNAKFSAGHLEKHDSVCPFKIIPC-EQKCPDTLMRRDMDRHCITVCQMKLAN 254
+ C N GC AK G + H C F+ + C ++C + ++R+D+ H T CQ +
Sbjct: 108 VFCKNAPGCTAKIILGRYQDHLQQCLFQAVQCCNERCREPVLRKDLKEHASTYCQFREEK 167
Query: 255 CPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 168 CLY----CKKDVVVINLQNHE-ENLC 188
>ZFIN|ZDB-GENE-040305-2 [details] [associations]
symbol:traf4b "tnf receptor-associated factor 4b"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-040305-2 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 eggNOG:NOG321306 HSSP:Q12933
GeneTree:ENSGT00550000074359 HOGENOM:HOG000004841
HOVERGEN:HBG103438 OrthoDB:EOG4868C9 PANTHER:PTHR10131:SF46
EMBL:CU463284 EMBL:BC078361 EMBL:AJ556549 IPI:IPI00487539
RefSeq:NP_997982.1 UniGene:Dr.15893 SMR:Q7T1K1
Ensembl:ENSDART00000056878 GeneID:404035 KEGG:dre:404035 CTD:404035
InParanoid:Q7T1K1 OMA:LASHNEA NextBio:20817511 Uniprot:Q7T1K1
Length = 478
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 32/127 (25%), Positives = 58/127 (45%)
Query: 151 WSINRREAIAHILLKNVDFKN-EFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208
W+ + AH+ + + + C++K +EL EH+ H C + C + C +F
Sbjct: 92 WTAQNKLLQAHLSVCEFNVVSCPNRCSVKL-LRRELPEHLQHDCAKRKLHCDH--CGEQF 148
Query: 209 SAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQ 268
+ E H VCP + + CE KC ++RR + +H ++ C + C + C+
Sbjct: 149 TGEAYENHQGVCPEESVYCENKCGARMVRRLLAQHSVSECLKRKLPCRY----CKKEFLY 204
Query: 269 CMIQQHR 275
IQ H+
Sbjct: 205 DTIQNHQ 211
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 29/112 (25%), Positives = 50/112 (44%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD-MDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C + RD + H C + CPF
Sbjct: 194 PCRYCKKEFLYDTIQNHQQQCPRFPMQCPNRCGTPGITRDTLMAHVKEGCSTAMVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDK-PLKVLKNRVEELEKS 309
GC+ P+ + +H + +HL + ++R + L+ L+ R+EEL S
Sbjct: 254 EAGCKHRSPKTGVARHLEEAAPTHLSLLCGLVNRQRLELRDLRRRMEELSGS 305
>MGI|MGI:1202880 [details] [associations]
symbol:Traf4 "TNF receptor associated factor 4"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030323
"respiratory tube development" evidence=IMP] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0031996 "thioesterase
binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO] [GO:0046330 "positive regulation of
JNK cascade" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050699 "WW domain binding" evidence=ISO]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 MGI:MGI:1202880
Pfam:PF00097 Prosite:PS00518 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0006915 GO:GO:0007165
GO:GO:0042981 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0046330 GO:GO:0045860 GO:GO:0005923 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:CH466596
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 EMBL:AL591070 GO:GO:0030323
GeneTree:ENSGT00550000074359 CTD:9618 HOGENOM:HOG000004841
HOVERGEN:HBG103438 KO:K09848 OMA:EAFESHE OrthoDB:EOG4868C9
PANTHER:PTHR10131:SF46 EMBL:X92346 EMBL:AF233449 EMBL:AK035056
EMBL:AK040877 EMBL:AK053900 IPI:IPI00264492 RefSeq:NP_033449.2
UniGene:Mm.390418 ProteinModelPortal:Q61382 SMR:Q61382
STRING:Q61382 PhosphoSite:Q61382 PRIDE:Q61382 DNASU:22032
Ensembl:ENSMUST00000017530 GeneID:22032 KEGG:mmu:22032
InParanoid:Q8BHD9 NextBio:301790 Bgee:Q61382 CleanEx:MM_TRAF4
Genevestigator:Q61382 GermOnline:ENSMUSG00000017386 Uniprot:Q61382
Length = 470
Score = 129 (50.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +F ++ H CP +PC +C T+ R D+ H C CPF GC
Sbjct: 198 CTKEFVYDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPTHLKDSCSTAFVLCPFKESGC 257
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 258 KHRCPKLAMGRHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 126 (49.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 117 CPAKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGVCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
+MRR + +H + C + C + C IQ H++ C L
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCAY----CTKEFVYDTIQSHQYQ--CPRL 217
Score = 123 (48.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 28/85 (32%), Positives = 37/85 (43%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H + C F ++PC +CP L R
Sbjct: 65 KIYPDPELEVQVLGLA-IRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAKLSR 123
Query: 238 RDMDRHCITVCQMKLANCPFYAVGC 262
RD+ H C + C F GC
Sbjct: 124 RDLPAHLQHDCPKRRLKCEF--CGC 146
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 311 FDKLAEAPDVRSLSFAIKD 329
FD L E P R ++F++ D
Sbjct: 374 FDNLLEWPFARRVTFSLLD 392
>RGD|1306708 [details] [associations]
symbol:Traf4 "Tnf receptor associated factor 4" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0030323 "respiratory tube development"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031996 "thioesterase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISO] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA;ISO] [GO:0050699 "WW domain binding"
evidence=IEA;ISO] [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=IEA;ISO] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 RGD:1306708 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 GO:GO:0046330 GO:GO:0045860 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:CH473948
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 GO:GO:0030323 GeneTree:ENSGT00550000074359
CTD:9618 HOGENOM:HOG000004841 HOVERGEN:HBG103438 KO:K09848
OMA:EAFESHE OrthoDB:EOG4868C9 PANTHER:PTHR10131:SF46 EMBL:BC162047
IPI:IPI00869573 RefSeq:NP_001100487.1 UniGene:Rn.3219 SMR:B1WC90
STRING:B1WC90 Ensembl:ENSRNOT00000018468 GeneID:303285
KEGG:rno:303285 NextBio:651050 Genevestigator:B1WC90 Uniprot:B1WC90
Length = 470
Score = 129 (50.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +F ++ H CP +PC +C T+ R D+ H C CPF GC
Sbjct: 198 CTKEFVYDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPTHLKDSCSTAFVLCPFKESGC 257
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 258 KHRCPKLAMGRHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 126 (49.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 117 CPAKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGVCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
+MRR + +H + C + C + C IQ H++ C L
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCAY----CTKEFVYDTIQSHQYQ--CPRL 217
Score = 123 (48.4 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 28/85 (32%), Positives = 37/85 (43%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H + C F ++PC +CP L R
Sbjct: 65 KIYPDPELEVQVLGLA-IRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAKLSR 123
Query: 238 RDMDRHCITVCQMKLANCPFYAVGC 262
RD+ H C + C F GC
Sbjct: 124 RDLPAHLQHDCPKRRLKCEF--CGC 146
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 311 FDKLAEAPDVRSLSFAIKD 329
FD L E P R ++F++ D
Sbjct: 374 FDNLLEWPFARRVTFSLLD 392
>DICTYBASE|DDB_G0267436 [details] [associations]
symbol:abcF4 "putative non-transporter ABC protein"
species:44689 "Dictyostelium discoideum" [GO:0042626 "ATPase
activity, coupled to transmembrane movement of substances"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=ISS]
[GO:0006810 "transport" evidence=ISS] [GO:0006448 "regulation of
translational elongation" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003439 InterPro:IPR003593
InterPro:IPR017871 Pfam:PF00005 PROSITE:PS00211 PROSITE:PS50893
SMART:SM00382 dictyBase:DDB_G0267436 GO:GO:0005829 GO:GO:0005524
GenomeReviews:CM000150_GR GO:GO:0006200 EMBL:AAFI02000003
GO:GO:0016887 eggNOG:COG0488 EMBL:AF479256 RefSeq:XP_647476.1
ProteinModelPortal:Q8T6B4 EnsemblProtists:DDB0191119 GeneID:8616283
KEGG:ddi:DDB_G0267436 OMA:KGKHVEE GO:GO:0006448 Uniprot:Q8T6B4
Length = 1142
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 41/165 (24%), Positives = 79/165 (47%)
Query: 370 GEVNISEEGKINATDKVNEKEKISNKS-KPNEGGKGNEQE-KDSDGDVKEGKFTEGKNNG 427
G ++ EE + +++ + K K+ KP +GGKG++QE +D + DV++ GK +
Sbjct: 227 GVKHVEEEEEEEEEEEIEQPVKKGGKAPKPKKGGKGSKQESEDEEDDVQQPVKKGGKKDK 286
Query: 428 RKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTG 487
+K S+ + +E+ E I E V + + K KG+ V EE + +
Sbjct: 287 KKGSKH--VEEEEEEEEEEEI-------EQPVKKGSNKKDQKKGGKGKHVEEEEEEEEEE 337
Query: 488 KVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGR 532
++ + V+ +K +++ +GK +EEE+I K G+
Sbjct: 338 EIEQPVKKGSNKK--DQKKGGKGKQQQESEDEEEEIQQPVKKGGK 380
>TAIR|locus:2133847 [details] [associations]
symbol:AT4G26630 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR009057 GO:GO:0005829 EMBL:CP002687
GO:GO:0003677 Gene3D:1.10.10.60 EMBL:AL161565 EMBL:AL078465
InterPro:IPR014876 Pfam:PF08766 IPI:IPI00528596 PIR:T08929
RefSeq:NP_001031724.1 RefSeq:NP_194393.3 UniGene:At.43273
ProteinModelPortal:Q9SUA1 IntAct:Q9SUA1 STRING:Q9SUA1 PRIDE:Q9SUA1
EnsemblPlants:AT4G26630.1 EnsemblPlants:AT4G26630.2 GeneID:828770
KEGG:ath:AT4G26630 TAIR:At4g26630 HOGENOM:HOG000240218
InParanoid:Q9SUA1 OMA:TIEPTAN PhylomeDB:Q9SUA1
ProtClustDB:CLSN2680101 Genevestigator:Q9SUA1 Uniprot:Q9SUA1
Length = 763
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 39/154 (25%), Positives = 71/154 (46%)
Query: 366 GTINGEV-NISEEGKINATDKVNEK-EKISN--KSKPNEGGKGNEQEKDSDGDVKEGKFT 421
GT +G +I EEG + DK + EK+ N ++K E +G E+E + KE +
Sbjct: 172 GTKDGNTGDIKEEGTLVDEDKGTDMDEKVENGDENKQVENVEGKEKEDKEENKTKEVEAA 231
Query: 422 EGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVN---EEQKANEPGKVTKGEKVS 478
+ + + KV +E +++N N + K + + N E++K G +G+ S
Sbjct: 232 KAEVDESKVEDEKEGSEDENDNEKVESKDAKEDEKEETNDDKEDEKEESKGSKKRGKGTS 291
Query: 479 EEGKANDTGKVNKEVRASEGRKVSEERNINEGKT 512
GK + K + + +E R +R + E K+
Sbjct: 292 SGGKVREKNKTEEVKKDAEPRTPFSDRPVRERKS 325
>UNIPROTKB|E2QYH9 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 OMA:EAFESHE PANTHER:PTHR10131:SF46
EMBL:AAEX03006670 EMBL:AAEX03006669 Ensembl:ENSCAFT00000029849
Uniprot:E2QYH9
Length = 458
Score = 128 (50.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/85 (34%), Positives = 37/85 (43%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H + C F +IPC +CP L R
Sbjct: 65 KIYPDPELEVQVLSLA-IRCIHSEEGCRWSGPLRHLQSHLNTCSFNVIPCPNRCPTKLSR 123
Query: 238 RDMDRHCITVCQMKLANCPFYAVGC 262
RD+ H C + C F GC
Sbjct: 124 RDLPAHLQHDCPKRRLKCEF--CGC 146
Score = 128 (50.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 29/104 (27%), Positives = 44/104 (42%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +F ++ H CP +PC +C T+ R D+ H C L CPF GC
Sbjct: 198 CTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKESCSTALVLCPFKDSGC 257
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEEL 306
+ P I HR + + HL + + R + + +EEL
Sbjct: 258 KHRNPITPINHHREESVKPHLAMMCALVSRQRQELQERRELEEL 301
Score = 125 (49.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 117 CPTKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
+MRR + +H + C + C + C IQ H++ C L
Sbjct: 174 RMMRRLLAQHAASECPKRTQPCTY----CTKEFVFDTIQSHQYQ--CPRL 217
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 311 FDKLAEAPDVRSLSFAIKD 329
FD L E P R ++F++ D
Sbjct: 372 FDNLLEWPFARRVTFSLLD 390
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 398 PNEGGKGNEQEKDSDGDVKE 417
PN+ G G +D G +KE
Sbjct: 222 PNQCGVGTVAREDLPGHLKE 241
>GENEDB_PFALCIPARUM|PF14_0736 [details] [associations]
symbol:PF14_0736 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AE014187 RefSeq:XP_001348910.2
ProteinModelPortal:Q8IK70 EnsemblProtists:PF14_0736:mRNA
GeneID:812318 KEGG:pfa:PF14_0736 EuPathDB:PlasmoDB:PF3D7_1476600
Uniprot:Q8IK70
Length = 955
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 53/174 (30%), Positives = 79/174 (45%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKD-SDGDVKEGKFT 421
D G I ++ SE+ +I+ + K+K ++K N+ +G E+ K+ S + KE
Sbjct: 420 DHTGNIEKVLDHSEK-EIDPSKSDINKDKDKKENKQNDSTEGKEENKEESKEESKEESKE 478
Query: 422 EGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEG 481
E K +K S+E + + N+E + + NNE EE K E K E+ EE
Sbjct: 479 ESKEENKKESKEQSKEENKEENKE---ENNEKNNEKN-KEENK--EESKEDNKEENKEEN 532
Query: 482 KANDTGKVNKEV-RASEG-RKVSEERNINEGKTNGVRV-NEEEKI--NAEGKVN 530
K N NKEV S G +K E +N N + V N + I N E VN
Sbjct: 533 KDN-----NKEVCENSTGDKKEGNEHELNNRSGNVIEVYNRTDTIFDNNEQNVN 581
>UNIPROTKB|Q8IK70 [details] [associations]
symbol:PF14_0736 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AE014187 RefSeq:XP_001348910.2
ProteinModelPortal:Q8IK70 EnsemblProtists:PF14_0736:mRNA
GeneID:812318 KEGG:pfa:PF14_0736 EuPathDB:PlasmoDB:PF3D7_1476600
Uniprot:Q8IK70
Length = 955
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 53/174 (30%), Positives = 79/174 (45%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKD-SDGDVKEGKFT 421
D G I ++ SE+ +I+ + K+K ++K N+ +G E+ K+ S + KE
Sbjct: 420 DHTGNIEKVLDHSEK-EIDPSKSDINKDKDKKENKQNDSTEGKEENKEESKEESKEESKE 478
Query: 422 EGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEG 481
E K +K S+E + + N+E + + NNE EE K E K E+ EE
Sbjct: 479 ESKEENKKESKEQSKEENKEENKE---ENNEKNNEKN-KEENK--EESKEDNKEENKEEN 532
Query: 482 KANDTGKVNKEV-RASEG-RKVSEERNINEGKTNGVRV-NEEEKI--NAEGKVN 530
K N NKEV S G +K E +N N + V N + I N E VN
Sbjct: 533 KDN-----NKEVCENSTGDKKEGNEHELNNRSGNVIEVYNRTDTIFDNNEQNVN 581
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 52/173 (30%), Positives = 83/173 (47%)
Query: 364 GEGTINGEVNISE--EGKINATDKVNEKE---KISNKSKPNEGGKGN--EQEKDSDGDVK 416
G GT+ G+ +E G+ + V KE + S ++KPN G GN E + S G+ +
Sbjct: 167 GGGTMQGQCQSNELNVGEPHNDVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQ 226
Query: 417 EGKFTEG-----KNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKV 471
+G+ T K NG+K SE + H Q E +G +E R N+EQ N PGK
Sbjct: 227 KGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNG----DEKR-NDEQSPNSPGKK 281
Query: 472 TKGEKVSEEGK-ANDTGKVNK-EVRASEGRKVSEERNINEGKTNGVRVNEEEK 522
+ K ++GK ++D K VRA G+ + ++ E + +++E K
Sbjct: 282 SNSGK--QQGKQSSDPPKDGYIHVRARRGQ-ATNSHSLAE-RVRREKISERMK 330
>UNIPROTKB|Q9BUZ4 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030323 "respiratory tube development" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005923 "tight junction" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045860 "positive regulation of protein kinase
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IDA]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=IDA] [GO:0050699 "WW domain binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0031996 "thioesterase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0003677 "DNA
binding" evidence=TAS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0006915 GO:GO:0007165 GO:GO:0042981
GO:GO:0005856 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0046330 GO:GO:0045860 GO:GO:0005923 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 GO:GO:0030323 EMBL:AC010761 EMBL:X80200
EMBL:AF082185 EMBL:AY937224 EMBL:DQ323999 EMBL:BC001769
IPI:IPI00017037 IPI:IPI00162088 PIR:I38026 RefSeq:NP_004286.2
UniGene:Hs.8375 PDB:2EOD PDB:2YUC PDBsum:2EOD PDBsum:2YUC
ProteinModelPortal:Q9BUZ4 SMR:Q9BUZ4 IntAct:Q9BUZ4 MINT:MINT-107471
STRING:Q9BUZ4 PhosphoSite:Q9BUZ4 DMDM:30580636 PaxDb:Q9BUZ4
PeptideAtlas:Q9BUZ4 PRIDE:Q9BUZ4 DNASU:9618 Ensembl:ENST00000262395
Ensembl:ENST00000262396 GeneID:9618 KEGG:hsa:9618 UCSC:uc002hcq.1
UCSC:uc002hcs.3 CTD:9618 GeneCards:GC17P027071 HGNC:HGNC:12034
HPA:CAB009055 MIM:602464 neXtProt:NX_Q9BUZ4 PharmGKB:PA36711
HOGENOM:HOG000004841 HOVERGEN:HBG103438 InParanoid:Q9BUZ4 KO:K09848
OMA:EAFESHE OrthoDB:EOG4868C9 ChiTaRS:TRAF4
EvolutionaryTrace:Q9BUZ4 GenomeRNAi:9618 NextBio:36083
ArrayExpress:Q9BUZ4 Bgee:Q9BUZ4 CleanEx:HS_TRAF4
Genevestigator:Q9BUZ4 GermOnline:ENSG00000076604
PANTHER:PTHR10131:SF46 Uniprot:Q9BUZ4
Length = 470
Score = 127 (49.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 33/110 (30%), Positives = 49/110 (44%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
+MRR + +H + C + C + C IQ H++ C L
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY----CTKEFVFDTIQSHQYQ--CPRL 217
Score = 124 (48.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +F ++ H CP + C +C T+ R D+ H C L CPF GC
Sbjct: 198 CTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFKDSGC 257
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 258 KHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 121 (47.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 29/85 (34%), Positives = 37/85 (43%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H + C F +IPC +CP L R
Sbjct: 65 KIYPDPELEVQVLGLP-IRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSR 123
Query: 238 RDMDRHCITVCQMKLANCPFYAVGC 262
RD+ H C + C F GC
Sbjct: 124 RDLPAHLQHDCPKRRLKCEF--CGC 146
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 311 FDKLAEAPDVRSLSFAIKD 329
FD L E P R ++F++ D
Sbjct: 374 FDNLLEWPFARRVTFSLLD 392
>DICTYBASE|DDB_G0268444 [details] [associations]
symbol:DDB_G0268444 "TRAF-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR017964 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061
dictyBase:DDB_G0268444 Prosite:PS00518 GO:GO:0005737 GO:GO:0000166
GO:GO:0046872 GO:GO:0006139 GO:GO:0008270 EMBL:AAFI02000003
GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SUPFAM:SSF49599 GO:GO:0003887 Gene3D:3.90.890.10 eggNOG:NOG289765
RefSeq:XP_001134485.1 ProteinModelPortal:Q1ZXR0
EnsemblProtists:DDB0232346 GeneID:8616387 KEGG:ddi:DDB_G0268444
InParanoid:Q1ZXR0 Uniprot:Q1ZXR0
Length = 502
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 47/210 (22%), Positives = 89/210 (42%)
Query: 70 RTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSGWM 129
+T E L K+ E + ++ +E+S + + I DF++ ++ N F +
Sbjct: 51 KTCWAESLFKKKECMICRCIV---KSISELSRNRF-IEQDFLN-IKVNCPNSFKYIDENK 105
Query: 130 SSEKREDRIDDFLQEMEISGFWSINRREA-IAHILLKNVDFKNEFHCNMKFNSEKELNEH 188
++ + +++ +++ G + ++ HI K + N EKE E
Sbjct: 106 NNNNKIKDLENGCKDIITIGEIEKHLKQCKFTHIKCKFIGCNKIIRLNQVEKHEKEQCEF 165
Query: 189 ML-HCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPC-EQKCPDTLMRRDMDRHCIT 246
L +C + C +G ++ LE H CP I+ C E C L R ++ H
Sbjct: 166 RLEYCRY----CDTDGITSR----SLENHYKECPKFIVKCSENGCTVQLERSQLESHIEK 217
Query: 247 VCQMKLANCPFYAVGCQST--IPQCMIQQH 274
CQM + +CP+ GC+ + P+ + QH
Sbjct: 218 QCQMVMIDCPYKIYGCEQSNRFPKSNLTQH 247
>RGD|1306536 [details] [associations]
symbol:Rrbp1 "ribosome binding protein 1" species:10116 "Rattus
norvegicus" [GO:0005783 "endoplasmic reticulum" evidence=ISO]
RGD:1306536 GeneTree:ENSGT00530000063895 IPI:IPI00951128
PhosphoSite:F1M853 Ensembl:ENSRNOT00000055602 ArrayExpress:F1M853
Uniprot:F1M853
Length = 1324
Score = 129 (50.5 bits), Expect = 0.00019, P = 0.00019
Identities = 49/176 (27%), Positives = 80/176 (45%)
Query: 364 GEGTIN------GEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKE 417
GEG N G N +++G+ A ++ + E N++K EGG+ Q K +G +
Sbjct: 163 GEGAQNQAKKGEGAQNQAKKGE-GAQNQAKKGEGAQNQAKKGEGGQN--QAKKGEGAQNQ 219
Query: 418 GKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGK--VTKGE 475
K EG N K E + ++ EG + GK E N+ +K E G+ KGE
Sbjct: 220 AKKGEGAQNQAKKGEG--VQNQAKKGVEGAQNQGK-KGEANQNQAKKG-EGGQNQTKKGE 275
Query: 476 KVSEEGKAND-TGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVN 530
+ +GK + T K +K++ ++ + E N+GK N+ +K EG N
Sbjct: 276 GLQNQGKKGEATQKQDKKIEGAQNQGKKPEGTPNQGKKGEGAQNQGKK--GEGAQN 329
>UNIPROTKB|E1BX70 [details] [associations]
symbol:RNF151 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00530000063647 EMBL:AADN02024876
IPI:IPI00601918 Ensembl:ENSGALT00000025714 OMA:HERECEY
Uniprot:E1BX70
Length = 244
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 40/159 (25%), Positives = 73/159 (45%)
Query: 170 KN-EFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCE 228
KN E+ C M + E ++ H C + + C N GC + +L+ H +VC ++ C
Sbjct: 83 KNREYGCEMVCSLES-IDRHERECEYSQIPCSNAGCTVQIERRNLDGHLAVCEYRSRECP 141
Query: 229 QKCPDTLMRRDMDRH-CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYIL 287
C T++ + +H C+ + +L + C +++ +H+ + S L
Sbjct: 142 NGCGYTILSAEDTQHNCVAELRTELELLRSEMI--------CRVEEAKHE-MESRL--DS 190
Query: 288 QKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFA 326
Q+ H + VL+N +E L+ S ++ DVRSL A
Sbjct: 191 QRRHMVQKESVLQNEIEYLQ-SQMSRVMS--DVRSLMAA 226
>DICTYBASE|DDB_G0289337 [details] [associations]
symbol:DDB_G0289337 species:44689 "Dictyostelium
discoideum" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0289337 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000139 eggNOG:NOG145324 RefSeq:XP_636266.1
ProteinModelPortal:Q54HN5 EnsemblProtists:DDB0188369 GeneID:8627085
KEGG:ddi:DDB_G0289337 InParanoid:Q54HN5 OMA:MESINIS Uniprot:Q54HN5
Length = 1528
Score = 129 (50.5 bits), Expect = 0.00022, P = 0.00022
Identities = 42/153 (27%), Positives = 64/153 (41%)
Query: 385 KVNEKEKISNK-SKPNEGGKGNEQEKDSDG-DVKEGKF-TEGKNNGRKVSEEDRIHDEQN 441
K EKE I N NE NE EK++D + KE + E KN +E + ++ +N
Sbjct: 1052 KNKEKEIIKNNHDNDNENENKNENEKENDNQNEKENENENENKNKNENKNENEIKNENEN 1111
Query: 442 VNREGTIDGGKINNETR-VNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRK 500
N + + NE + NE +K NE K E V+E + K N +
Sbjct: 1112 ENENENENENENENENKNENENEKENENENKNKNENVNENKNEQEEEKENNNNNNNNNNN 1171
Query: 501 VSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
+ N N N N ++K +E K N ++
Sbjct: 1172 NNNNNNNNNNNNNN---NRKQKNISEQKDNPKN 1201
>UNIPROTKB|Q28092 [details] [associations]
symbol:CYLC2 "Cylicin-2" species:9913 "Bos taurus"
[GO:0033150 "cytoskeletal calyx" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA] InterPro:IPR026189 GO:GO:0007275 GO:GO:0030154
GO:GO:0005200 GO:GO:0007283 GO:GO:0033150 PANTHER:PTHR16742
EMBL:Z46789 IPI:IPI00701189 PIR:I46014 RefSeq:NP_776728.1
UniGene:Bt.50017 STRING:Q28092 PRIDE:Q28092 GeneID:281738
KEGG:bta:281738 CTD:1539 eggNOG:NOG73087 NextBio:20805658
Uniprot:Q28092
Length = 488
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 362 PDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFT 421
PD + + E S++GK +AT+ +EK +K + G +E SD ++G
Sbjct: 155 PDEKKDLKKERKDSKKGKESATESEDEKAGAEKGAKKDRKGSKKGKETPSDSGSEKG--- 211
Query: 422 EGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEK--VSE 479
+ K + +K S++D E EG K +++ +K E ++GEK +
Sbjct: 212 DAKKDSKK-SKKDSKGKESATESEGEKGDAKKDDKKGKKGSKKGKESATESEGEKGDAKK 270
Query: 480 EGKANDTG-KVNKE-VRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGK 528
+ K G K KE SEG K +++ +GK G + +E +EG+
Sbjct: 271 DDKKGKKGSKKGKESATESEGEKGDAKKDDKKGK-KGSKKGKESATESEGE 320
>DICTYBASE|DDB_G0267744 [details] [associations]
symbol:DDB_G0267744 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001293 InterPro:IPR008974
PROSITE:PS50089 PROSITE:PS50145 dictyBase:DDB_G0267744
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
EMBL:AAFI02000003 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF49599 eggNOG:KOG0297 RefSeq:XP_647276.1
ProteinModelPortal:Q55GA8 EnsemblProtists:DDB0189514 GeneID:8616083
KEGG:ddi:DDB_G0267744 InParanoid:Q55GA8 OMA:TEINCAN
ProtClustDB:CLSZ2431521 Uniprot:Q55GA8
Length = 429
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 45/163 (27%), Positives = 74/163 (45%)
Query: 166 NVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAG----HLEKHDSVCP 221
N D KN+ C +K + E + H+ C + C E C+ + + H+E H C
Sbjct: 133 NDDNKNK-EC-LKIR-QGEFDHHLKECPNSLIKC--EHCSIEITRSKQTDHIENH---C- 183
Query: 222 FKIIP-CEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
K++ CE C + R + + H T+C KL CPF GC + + I++H
Sbjct: 184 LKVLKQCEF-CFKLIERGEFNNHQDTICLSKLIKCPFNEGGCVDLVKRSDIKEHLSVLAG 242
Query: 281 SHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSL 323
HLLY + ++ LK+ K+ E E + +L + D + L
Sbjct: 243 EHLLYSITMIN-SLSLKLEKSNSELQESISYSRLLKK-DFKEL 283
>DICTYBASE|DDB_G0294611 [details] [associations]
symbol:DDB_G0294611 "unknown" species:44689
"Dictyostelium discoideum" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0294611
EMBL:AAFI02000141 InterPro:IPR017859 PRINTS:PR01503
RefSeq:XP_001733029.1 PRIDE:B0G167 EnsemblProtists:DDB0233684
GeneID:8627160 KEGG:ddi:DDB_G0294611 OMA:GFEFNTW Uniprot:B0G167
Length = 611
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 59/253 (23%), Positives = 106/253 (41%)
Query: 296 LKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIK-DLEAKLGPFKEDTVNRYSXXXXXXXX 354
LK+ ++E++ K+A+ D +S S IK E ++ +D RYS
Sbjct: 349 LKLSLTELKEVDADLVKKIADE-DKKSWSSGIKKSKETQI----DD--GRYSDSDESSSE 401
Query: 355 XXXXXXXPDGEGTINGEVN--ISEEGKINATDKVNEKEKISNKSKPNEGG--KGNEQEKD 410
P E + V ++ + K ++K+ + K K +E K +E+E+
Sbjct: 402 DEESEEEPKKE-VVKRVVKKAAAKPAPVKPAPKQSKKKAAAKKPKADEKSEEKADEKEEK 460
Query: 411 SDGDVKEGKFTEGKNNGR------KVSEEDRIHD-EQNVNREGTIDGGKINNETRVNEEQ 463
+ + KE + E K + K +E + D E+ +E D K E + E++
Sbjct: 461 EEKEEKEEEKEEEKEEEKEEEKEEKEEKETKADDKEEKEEKEAKADEKKEKAEEKKEEKK 520
Query: 464 KANEPGKVTKGEKVSEEGKANDTG-KVNK-EVRASEGRKVSEERNINEG-KTNGVRVNEE 520
+ + + K E+ EE KA+D KV K + + S+G+ E + KTNG R E
Sbjct: 521 EEEKKEEEKKEEEKKEESKADDAEEKVEKPKAKVSKGKNTKETKETTTATKTNGKRKEPE 580
Query: 521 EKINAEGKVNGRD 533
+ N ++
Sbjct: 581 STASKPAAKNTKE 593
>UNIPROTKB|G3N370 [details] [associations]
symbol:HTATSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00390000009902
OMA:MQELYGD EMBL:DAAA02033795 Ensembl:ENSBTAT00000025363
Uniprot:G3N370
Length = 756
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 63/235 (26%), Positives = 104/235 (44%)
Query: 304 EELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSXXXXXXXXXXXXX---X 360
E +++ F+K+ + +V + + KD + GP KE +R
Sbjct: 424 EPIDEKKFEKMEDGGEVEEAA-SEKDAKES-GPEKEAEGSREESEESCLERESKAACPKK 481
Query: 361 XPDGEGTINGEVNISEEGKINATDK--VNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEG 418
GEG+ E EEG N K V EKE K K + G+E+E + +G G
Sbjct: 482 RESGEGSPEKE---HEEGNPNKESKETVPEKESKKKKLKTDPDKNGHEKESEEEGP---G 535
Query: 419 KFTEGKNNGRKVSEEDRIHDEQNVN-REGTIDGGKINNETRVNEEQKANEPGKVTK--GE 475
K +EG+ + +KV+ ED ++++ + E + G E N +K E K E
Sbjct: 536 KESEGEASPQKVASEDDDSEQESKDCSEKQFENGS-EKELEENGLEKGFEEDASDKEFNE 594
Query: 476 KVSE-EGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKV 529
+ E E + N++ K E +SE KV +E +E + + +EE+ +A GKV
Sbjct: 595 NILEKELEENESEKSEFEDDSSE--KVFDEEG-SEKEFDEESDEKEEEEDAYGKV 646
>ZFIN|ZDB-GENE-030131-6117 [details] [associations]
symbol:dido1 "death inducer-obliterator 1"
species:7955 "Danio rerio" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003618 InterPro:IPR017890 InterPro:IPR019787
Pfam:PF00628 Pfam:PF07500 PROSITE:PS50016 PROSITE:PS51321
SMART:SM00249 SMART:SM00510 ZFIN:ZDB-GENE-030131-6117 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.472.30
InterPro:IPR012921 Pfam:PF07744 SUPFAM:SSF46942
GeneTree:ENSGT00530000063844 EMBL:BX296530 EMBL:BX005175
IPI:IPI00971682 Ensembl:ENSDART00000110882 ArrayExpress:F1QQA3
Bgee:F1QQA3 Uniprot:F1QQA3
Length = 2779
Score = 130 (50.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 43/153 (28%), Positives = 78/153 (50%)
Query: 375 SEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSD-GDVKE-GKFTE-GKNNGR-KV 430
S+ GK + K +E+ K S + K +E GK +E+ K+ D G + GK ++ GK + R K
Sbjct: 2526 SDRGKESDRGKESERGKESERGKESERGKESERGKEFDRGKESDRGKESDRGKESDRGKE 2585
Query: 431 SEEDRIHDEQNVNREGT-IDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKV 489
SE + + + G D GK ++ + ++ K ++ GK + K S+ GK +D GK
Sbjct: 2586 SERGKESERGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRGKE 2645
Query: 490 NKEVRASEGRKVSEERNINEGKTNGVRVNEEEK 522
+ + S+ K S++ + + + R E E+
Sbjct: 2646 SDRGKESDRGKESDKYGDGDKRRDRDRDRERER 2678
Score = 126 (49.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 45/151 (29%), Positives = 76/151 (50%)
Query: 387 NEKEKISNKSKPNEGGKGNEQEKDSD-GDVKE-GK-FTEGKNNGRKVSEEDRIHDEQNVN 443
+++ K S++ K +E GK +E+ K+S+ G E GK F GK + R E DR E +
Sbjct: 2526 SDRGKESDRGKESERGKESERGKESERGKESERGKEFDRGKESDRG-KESDR-GKESDRG 2583
Query: 444 REGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSE 503
+E + GK + + ++ K ++ GK + K S+ GK +D GK + + S+ K S+
Sbjct: 2584 KES--ERGKESERGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRGKESD 2641
Query: 504 E-RNINEGKTNGVRVNEEEKINAEGKVNGRD 533
+ + GK + R E +K K RD
Sbjct: 2642 RGKESDRGKESD-RGKESDKYGDGDKRRDRD 2671
Score = 53 (23.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 63 GSVAVGIRTEMVEYLTKRSETFVAE--SVI--LEDPDQAEVSDHPYDIISDFVDEFAL-- 116
G +AVGI EM + + S++ L+DP + Y ++ + F L
Sbjct: 791 GRLAVGIEKEMFNLCMNTDNKYKNKYRSLMFNLKDPKNKGLF---YRVVGGEISPFRLVR 847
Query: 117 -SKRNLFSR-VSGWMSSEKREDRID 139
S L S+ +S W SE E +D
Sbjct: 848 LSPEELLSKELSDWRKSESSEKSLD 872
>UNIPROTKB|F1MI94 [details] [associations]
symbol:F1MI94 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA] InterPro:IPR026189 GO:GO:0005200 PANTHER:PTHR16742
IPI:IPI00701189 OMA:KKPSSTD GeneTree:ENSGT00690000102102
EMBL:DAAA02024343 Ensembl:ENSBTAT00000020732 Uniprot:F1MI94
Length = 394
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 45/181 (24%), Positives = 84/181 (46%)
Query: 362 PDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGG--KGNEQEKDSD---GDVK 416
PD + + E S++GK +AT+ +EK +K + G KG E DS GD K
Sbjct: 155 PDEKKDLKKERKDSKKGKESATESEDEKAGAEKGAKKDRKGSKKGKETPSDSGSEKGDAK 214
Query: 417 -EGKFTEGKNNGRKVSEEDRIH--DEQNVNREGTIDGGKINNETRVNEE-QKANEPGKVT 472
+ K ++ + G++ + E D + +++G G K E+ E +K +
Sbjct: 215 KDSKKSKKDSKGKESATESEGEKGDAKKDDKKGK-KGSKKGKESATESEGEKGDAKKDDK 273
Query: 473 KGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGR 532
KG+K S++GK +D+ + A + K +++ +GK + E+K + + K +
Sbjct: 274 KGKKGSKKGKESDSKAEGDKGDAKKDDK-KDKKGSKKGKESATESEGEKKDSKKDKAGKK 332
Query: 533 D 533
D
Sbjct: 333 D 333
>MGI|MGI:1355295 [details] [associations]
symbol:Hmgn5 "high-mobility group nucleosome binding domain
5" species:10090 "Mus musculus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
InterPro:IPR000079 Pfam:PF01101 PRINTS:PR00925 PROSITE:PS00355
SMART:SM00527 MGI:MGI:1355295 GO:GO:0005654 GO:GO:0005730
GO:GO:0000785 GO:GO:0006357 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0031492 GeneTree:ENSGT00690000102194
OrthoDB:EOG4CZBHP CTD:79366 eggNOG:NOG134182 ChiTaRS:HMGN5
EMBL:AF213454 EMBL:AB018374 EMBL:AK013748 EMBL:AK131996
EMBL:AL954348 EMBL:BC021626 EMBL:BC083087 IPI:IPI00311626
RefSeq:NP_057919.2 UniGene:Mm.298443 PhosphoSite:Q9JL35
PaxDb:Q9JL35 PRIDE:Q9JL35 Ensembl:ENSMUST00000033597 GeneID:50887
KEGG:mmu:50887 UCSC:uc009ucs.1 HOGENOM:HOG000070450
HOVERGEN:HBG052673 InParanoid:Q3V272 NextBio:307873 Bgee:Q9JL35
CleanEx:MM_NSBP1 Genevestigator:Q9JL35
GermOnline:ENSMUSG00000031245 Uniprot:Q9JL35
Length = 406
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 61/260 (23%), Positives = 108/260 (41%)
Query: 287 LQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYS 346
+Q + +D+ K K+ EE+E D E + K +A++ +E+ +
Sbjct: 129 IQDVEKDEDGKEHKDTGEEVE----DGKIEEEGLNEKPGTAKSEDAEVSKDEEEKGDNEK 184
Query: 347 XXXXXXXXXXXXXXXPDGEGTINGEVNISEEGKINATD----KVNEKEKISNKSKPNEGG 402
D EG E + E+ K D K E +++ + +P E G
Sbjct: 185 GEDGKEEGDEKEEEKDDKEGDTGTEKEVKEQNKEAEEDDGKCKEEENKEVGKEGQPEEDG 244
Query: 403 KGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTI--DGGKI-----NN 455
K + E+ D+ E +GK G+ + IH E++ +EG DG +
Sbjct: 245 KEDLHEEVGKEDLHE---EDGKE-GQPEEDGKEIHHEED-GKEGQPEEDGKEYLHEEDGE 299
Query: 456 ETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKT-NG 514
E + E+QK +P + K ++ E+GK + KE EG K E+ + +GK +G
Sbjct: 300 EGQPKEDQKEGQPEEDGKEDQPEEDGKEGQCKEDGKEGHHEEGGK--EDLHEEDGKEKDG 357
Query: 515 VRVNEEEKINAEGKVN-GRD 533
+ + +E+ E V+ G D
Sbjct: 358 GKEDRKEEGEQEVAVDEGSD 377
>UNIPROTKB|F1SA11 [details] [associations]
symbol:LOC100156979 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
OMA:YGCTFQG PANTHER:PTHR10131:SF45 EMBL:CT998550
Ensembl:ENSSSCT00000002804 Ensembl:ENSSSCT00000034942
Uniprot:F1SA11
Length = 568
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 44/163 (26%), Positives = 73/163 (44%)
Query: 159 IAHIL--LKNVDFKNEFHCNMKFNSEK----ELNEHMLH-CGFISMICPNEGCNAKFSAG 211
+ H+L LKN E +C EK +L +H+ C + C + C ++
Sbjct: 130 LGHLLVHLKNDCQFEELYCVRADCKEKVLRKDLRDHVEKACKYREATCSH--CKSQVPMI 187
Query: 212 HLEKH-DSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC--QSTIP 267
L+KH D+ CP ++ C KC TL+R ++ H ++ C + C F GC Q T
Sbjct: 188 TLQKHEDTECPCVVVSCPHKCSVQTLLRSELSAH-LSECVNAPSTCSFKRYGCVFQGTNQ 246
Query: 268 QCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKS 309
Q I+ H H+ + + + +K + +L+N E KS
Sbjct: 247 Q--IKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKS 287
>UNIPROTKB|F1S2U2 [details] [associations]
symbol:F1S2U2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027130
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
Ensembl:ENSSSCT00000017000 Uniprot:F1S2U2
Length = 458
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 197 MICPNE-GCNAKFSAGHLEKHDSVCPFKIIPC-EQKCPDTLMRRDMDRHCITVCQMKLAN 254
+ C N GC AK G + H C F+ + C ++C + ++R+D+ H T CQ +
Sbjct: 16 VFCKNAPGCTAKIILGRYQDHLQQCLFQAVQCCNERCQEPVLRKDLKEHASTYCQFREEK 75
Query: 255 CPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 76 CLY----CKKDVVVINLQNHE-ENLC 96
>UNIPROTKB|E2RDE8 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0046849 "bone remodeling" evidence=IEA] [GO:0045672 "positive
regulation of osteoclast differentiation" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF48
EMBL:AAEX03011373 Ensembl:ENSCAFT00000010962 OMA:CLMALRN
Uniprot:E2RDE8
Length = 562
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 43/169 (25%), Positives = 69/169 (40%)
Query: 171 NEFHCNMKFNSEKELNEHML-HCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQ 229
N C F + +LN H+L C + C N C A + E HD CP + CE
Sbjct: 161 NCLQCQRTFQ-KCQLNIHILKECPRRQVSCMN--CAALMAFEDKEIHDQNCPLANVICEY 217
Query: 230 KCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
C L+R M H C C F GC + + + +H ++ SH+ + Q
Sbjct: 218 -CNTMLIREQMPNHYDLDCPTAPIPCTFSTFGCHVKMQRNHLARHLQENTQSHMRMLGQA 276
Query: 290 LHR-DKPLKVLKNR-VEELEKSYFDKLAEA--PDVRSLSFAIKDLEAKL 334
+ L + R V + S +++ P+V++ I+ LE +L
Sbjct: 277 VQSLSLALAPVPQRDVPPYDSSSVSRVSSTCHPEVQNFQETIQQLEGRL 325
>UNIPROTKB|E1BBH2 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
CTD:7187 KO:K03174 OMA:YGCTFQG PANTHER:PTHR10131:SF45
EMBL:DAAA02053290 IPI:IPI00716910 RefSeq:NP_001192515.1
UniGene:Bt.18290 Ensembl:ENSBTAT00000017918 GeneID:506182
KEGG:bta:506182 NextBio:20867485 Uniprot:E1BBH2
Length = 568
Score = 122 (48.0 bits), Expect = 0.00037, P = 0.00037
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIFCRNEGRGCTEQLALGHLLVHLKNDCQFEELPCVRADCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
+ A C C+S +P +Q+H D C
Sbjct: 173 REATCSH----CKSQVPMVTLQKHE-DTEC 197
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 45/164 (27%), Positives = 72/164 (43%)
Query: 158 AIAHIL--LKNVDFKNEFHCNMKFNSEK----ELNEHMLH-CGFISMICPNEGCNAKFSA 210
A+ H+L LKN E C EK +L +H+ C + C + C ++
Sbjct: 129 ALGHLLVHLKNDCQFEELPCVRADCKEKVLRKDLRDHVEKACKYREATCSH--CKSQVPM 186
Query: 211 GHLEKH-DSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC--QSTI 266
L+KH D+ CP + C KC TL+R ++ H ++ C + C F GC Q T
Sbjct: 187 VTLQKHEDTECPCVAVSCPHKCSVQTLLRSELSAH-LSECVNAPSTCSFKRYGCVFQGTN 245
Query: 267 PQCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKS 309
Q I+ H H+ + + + +K + +L+N E KS
Sbjct: 246 QQ--IKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKS 287
>DICTYBASE|DDB_G0284321 [details] [associations]
symbol:DDB_G0284321 "putative polypyrimidine tract
binding protein (PTBP1)" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0284321 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000064 eggNOG:NOG263741 OMA:DATENEI
RefSeq:XP_638677.1 ProteinModelPortal:Q54PW8 SMR:Q54PW8
EnsemblProtists:DDB0233645 GeneID:8624506 KEGG:ddi:DDB_G0284321
InParanoid:Q54PW8 Uniprot:Q54PW8
Length = 892
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 39/170 (22%), Positives = 65/170 (38%)
Query: 366 GTINGEVNISEEGKINATDKVNEKEKISNKS-KPNEGGKGNEQE----KDSDGDVK--EG 418
G +N E+ ISE N ++ +N +NK+ K N N K++DG+ E
Sbjct: 51 GAVNQEL-ISEPNNRNNSETLNNNNNNNNKNNKKNNNNNNNNSSSNNIKETDGNKNDVEN 109
Query: 419 KFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVS 478
+ +E G + E++ ++ ++ E D NN N N +
Sbjct: 110 EISEVDFEGSENENENKNTNQNDIKNENENDNNNNNNNNNNNNNNNNNNNNNNNNNN--N 167
Query: 479 EEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGK 528
N+ N+ +E +E N NE NE+EK N + K
Sbjct: 168 NNNNNNNNSNENENENENENENENENENENENAKENENENEKEKDNEDNK 217
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 35/170 (20%), Positives = 59/170 (34%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGK 424
E G N +E N D NE E +N + N N +++ +
Sbjct: 113 EVDFEGSENENENKNTNQNDIKNENENDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 172
Query: 425 NNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKG---EKVSEEG 481
NN +E + ++ +N N + NE NE++K NE K +K +K+
Sbjct: 173 NNNSNENENENENENENENENENENENAKENENE-NEKEKDNEDNKESKTSPPQKIKNLD 231
Query: 482 KANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNG 531
++N+ N + + N N N N +NG
Sbjct: 232 ESNNNSNSNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNKNLNG 281
>CGD|CAL0003910 [details] [associations]
symbol:orf19.1374 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003910 EMBL:AACQ01000101 EMBL:AACQ01000099
RefSeq:XP_714548.1 RefSeq:XP_714644.1 GeneID:3643696 GeneID:3643807
KEGG:cal:CaO19.1374 KEGG:cal:CaO19.8954 eggNOG:NOG117083
Uniprot:Q59YF2
Length = 190
Score = 112 (44.5 bits), Expect = 0.00042, P = 0.00042
Identities = 35/125 (28%), Positives = 61/125 (48%)
Query: 377 EGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRI 436
E + TD+ NE E N+ NE + E E++ D D +E T+ K+NG++ + ++
Sbjct: 60 EDDVEHTDE-NENEN-ENEGD-NEEEEEEEGEEEGDDDEEEEN-TKDKSNGKEDIDRNKD 115
Query: 437 HDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGE----KVSEEGKANDTGKVNKE 492
E N N T K +ET++ E + ++E TK KVS+E N +N++
Sbjct: 116 SKEDNSNANST-QAVKNKSETKLKENEHSDEKSDPTKENSKDGKVSKENTTNANDSINEK 174
Query: 493 VRASE 497
+ +
Sbjct: 175 LTTDD 179
>UNIPROTKB|Q59YF2 [details] [associations]
symbol:CaO19.1374 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003910 EMBL:AACQ01000101 EMBL:AACQ01000099
RefSeq:XP_714548.1 RefSeq:XP_714644.1 GeneID:3643696 GeneID:3643807
KEGG:cal:CaO19.1374 KEGG:cal:CaO19.8954 eggNOG:NOG117083
Uniprot:Q59YF2
Length = 190
Score = 112 (44.5 bits), Expect = 0.00042, P = 0.00042
Identities = 35/125 (28%), Positives = 61/125 (48%)
Query: 377 EGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRI 436
E + TD+ NE E N+ NE + E E++ D D +E T+ K+NG++ + ++
Sbjct: 60 EDDVEHTDE-NENEN-ENEGD-NEEEEEEEGEEEGDDDEEEEN-TKDKSNGKEDIDRNKD 115
Query: 437 HDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGE----KVSEEGKANDTGKVNKE 492
E N N T K +ET++ E + ++E TK KVS+E N +N++
Sbjct: 116 SKEDNSNANST-QAVKNKSETKLKENEHSDEKSDPTKENSKDGKVSKENTTNANDSINEK 174
Query: 493 VRASE 497
+ +
Sbjct: 175 LTTDD 179
>GENEDB_PFALCIPARUM|PF10_0115 [details] [associations]
symbol:PF10_0115 "QF122 antigen" species:5833
"Plasmodium falciparum" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AE014185 HSSP:Q9UNW9
RefSeq:XP_001347400.1 ProteinModelPortal:Q8IJS7 IntAct:Q8IJS7
MINT:MINT-1556318 PRIDE:Q8IJS7 EnsemblProtists:PF10_0115:mRNA
GeneID:810273 KEGG:pfa:PF10_0115 EuPathDB:PlasmoDB:PF3D7_1011800
HOGENOM:HOG000283121 OMA:ANCESIN ProtClustDB:CLSZ2432888
Uniprot:Q8IJS7
Length = 1139
Score = 125 (49.1 bits), Expect = 0.00042, P = 0.00042
Identities = 30/144 (20%), Positives = 66/144 (45%)
Query: 386 VNEKEKISNKSKPNEGGKGNEQEKDS--DGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVN 443
+N+K++ +K +G K E ++ +G +++ K N +K++ ++ + + +
Sbjct: 31 MNDKKQGGSKLNEKKGSKVTELTSNAHMNGSIQKKKEENELENNKKLNHKNNLEENCVIK 90
Query: 444 REGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSE 503
+ + GG NE + ++ N KG K ++ K N +G N + + + +E
Sbjct: 91 SKEVVKGGDQKNEGQAKKKNNNNNNNNKKKGTKENDMDKINQSGNTNDDKKKANKNNTTE 150
Query: 504 ERNINEGKTNGVRV-NEEEKINAE 526
N+G N V N++E + E
Sbjct: 151 GNEKNKGSNNKKYVGNKDENMKVE 174
>UNIPROTKB|Q8IJS7 [details] [associations]
symbol:PF10_0115 "QF122 antigen" species:36329 "Plasmodium
falciparum 3D7" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 EMBL:AE014185 HSSP:Q9UNW9 RefSeq:XP_001347400.1
ProteinModelPortal:Q8IJS7 IntAct:Q8IJS7 MINT:MINT-1556318
PRIDE:Q8IJS7 EnsemblProtists:PF10_0115:mRNA GeneID:810273
KEGG:pfa:PF10_0115 EuPathDB:PlasmoDB:PF3D7_1011800
HOGENOM:HOG000283121 OMA:ANCESIN ProtClustDB:CLSZ2432888
Uniprot:Q8IJS7
Length = 1139
Score = 125 (49.1 bits), Expect = 0.00042, P = 0.00042
Identities = 30/144 (20%), Positives = 66/144 (45%)
Query: 386 VNEKEKISNKSKPNEGGKGNEQEKDS--DGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVN 443
+N+K++ +K +G K E ++ +G +++ K N +K++ ++ + + +
Sbjct: 31 MNDKKQGGSKLNEKKGSKVTELTSNAHMNGSIQKKKEENELENNKKLNHKNNLEENCVIK 90
Query: 444 REGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSE 503
+ + GG NE + ++ N KG K ++ K N +G N + + + +E
Sbjct: 91 SKEVVKGGDQKNEGQAKKKNNNNNNNNKKKGTKENDMDKINQSGNTNDDKKKANKNNTTE 150
Query: 504 ERNINEGKTNGVRV-NEEEKINAE 526
N+G N V N++E + E
Sbjct: 151 GNEKNKGSNNKKYVGNKDENMKVE 174
>UNIPROTKB|I3LC61 [details] [associations]
symbol:CYLC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA] InterPro:IPR026189 GO:GO:0005200 PANTHER:PTHR16742
OMA:KKPSSTD GeneTree:ENSGT00690000102102 EMBL:CU571436
Ensembl:ENSSSCT00000023377 Uniprot:I3LC61
Length = 388
Score = 119 (46.9 bits), Expect = 0.00044, P = 0.00044
Identities = 33/139 (23%), Positives = 65/139 (46%)
Query: 376 EEGKINATDKVNEKEKISNKSKPNEGG--KGNEQEKDSDGDVKEGKFTEGKNNGRKVSEE 433
++GK +AT+ EK SK ++ G KG E +S+G+ K+ K EGK + +K ++
Sbjct: 237 KKGKESATESEGEKGDAKKDSKKDKKGPKKGKESATESEGEKKDAKDKEGKKDSKKPGDK 296
Query: 434 -DRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKE 492
D D+++ ++ + G K + + + + P K K + + K G +
Sbjct: 297 GDESKDKKDSKKKESKKGKKDEKKPSEADSESKDTPKKDAKKDAKKDAKKDAKKGTEPES 356
Query: 493 VRASEGRKVSEERNINEGK 511
A + K +++ +GK
Sbjct: 357 ADAKKDAKKDAKKDAKKGK 375
>DICTYBASE|DDB_G0289557 [details] [associations]
symbol:DDB_G0289557 "peptidase C48 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
dictyBase:DDB_G0289557 GO:GO:0008234 GO:GO:0006508
EMBL:AAFI02000143 eggNOG:COG5160 KO:K08596 RefSeq:XP_636167.1
ProteinModelPortal:Q54HC5 EnsemblProtists:DDB0219453 GeneID:8627200
KEGG:ddi:DDB_G0289557 InParanoid:Q54HC5 Uniprot:Q54HC5
Length = 778
Score = 123 (48.4 bits), Expect = 0.00044, P = 0.00044
Identities = 43/173 (24%), Positives = 74/173 (42%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEK-EKISNKSKPNEGGKGNEQEKDSDGDVKEGKFT 421
D + ++ N+ + T+ N++ I N ++ NE ++ ++ + KE
Sbjct: 555 DDDDSVETTNNLDKTSVTTTTNLSNDQFVDIINTNENNEKENNEKENNQNENNEKENNQN 614
Query: 422 EGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEE- 480
E KN +E+ ++E N N E + +NE N++ NE + K E +EE
Sbjct: 615 E-KNQNENNKKENNENNENNENNENNKNNE--SNENNENKDTNKNEKVEEKKIEITNEEN 671
Query: 481 GKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGRD 533
GK NK+ + SE SE+RN NE + E NA ++ D
Sbjct: 672 GKVKYRENENKKEKESEDE--SEKRNENENGKETIETEEFTFFNAVVQIQPLD 722
>UNIPROTKB|E2QW67 [details] [associations]
symbol:TSPYL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002164 Pfam:PF00956
GO:GO:0005634 GO:GO:0006334 PANTHER:PTHR11875
GeneTree:ENSGT00530000062882 OMA:DYFETTD EMBL:AAEX03026384
Ensembl:ENSCAFT00000025519 Uniprot:E2QW67
Length = 721
Score = 121 (47.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 39/155 (25%), Positives = 76/155 (49%)
Query: 362 PDGEGTINGEVNISEEGKI-NATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDV--KEG 418
PDG+ N G +++D NE + + + N+G +G+ + D DG+ EG
Sbjct: 553 PDGDDENPKGDNYGSNGNNQDSSDSDNEGDNEGSDDEDNDGNEGDNEGSDDDGNEGDNEG 612
Query: 419 KFTEGKN-NGRKVSEEDRIHDEQNVNREGTIDGG--KINNETRVNEEQKANEPGKVTKGE 475
+ ++ K + +D D+ N N++ + I+ E+ V EE++ +E +GE
Sbjct: 613 SDDDDRDIEDYKNNTDDPDKDQDNSNKQDDYEDEVENISEESSVEEEEEGSEEDSEQEGE 672
Query: 476 KV-SEEGKANDTGKVNKEVRASEGRKVSEERNINE 509
+ +EEG + G + ++ SEG + SE+ ++ E
Sbjct: 673 ESDNEEGSDEEEG-IEED---SEGGEDSEDPDMEE 703
Score = 47 (21.6 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 21/82 (25%), Positives = 34/82 (41%)
Query: 70 RTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFS--RVSG 127
+ E E L E VILED D V + DIIS+ D ++ ++S
Sbjct: 406 KQEKEERLLHSKNRDKCEVVILEDSDDYHVME---DIISETSDSDGITDNETIHDIKISD 462
Query: 128 WMSS----EKREDRIDDFLQEM 145
+M + E ++ I D + +
Sbjct: 463 FMETTDCFETTDNEITDISESL 484
>TAIR|locus:2170563 [details] [associations]
symbol:AT5G40340 "AT5G40340" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] Pfam:PF00855 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730
InterPro:IPR000313 PROSITE:PS50812 EMBL:AB006702 UniGene:At.30902
IPI:IPI00518241 RefSeq:NP_198850.1 UniGene:At.30288
ProteinModelPortal:Q9FNE4 SMR:Q9FNE4 PRIDE:Q9FNE4
EnsemblPlants:AT5G40340.1 GeneID:834032 KEGG:ath:AT5G40340
TAIR:At5g40340 InParanoid:Q9FNE4 OMA:DINMNYN PhylomeDB:Q9FNE4
ArrayExpress:Q9FNE4 Genevestigator:Q9FNE4 Uniprot:Q9FNE4
Length = 1008
Score = 129 (50.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 43/144 (29%), Positives = 66/144 (45%)
Query: 378 GKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIH 437
G +++DK EKE++S KP GK ++KD G K+ K E + G++ +E D+ H
Sbjct: 673 GSYDSSDK--EKEELSEMGKPVTKGK---EKKDKKGKAKQ-KAEEIEVTGKEENETDK-H 725
Query: 438 DEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASE 497
+ R+ K +++ANE K + K SE K +D G+ + SE
Sbjct: 726 GKMKKERKRKKSESKKEGGEGEETQKEANESTKKERKRKKSESKKQSD-GEEETQKEPSE 784
Query: 498 GRKVSEERNINEGKTNGVRVNEEE 521
K +R E K V EEE
Sbjct: 785 STKKERKRKNPESKKKAEAVEEEE 808
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 123 SRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHI 162
S V KR D ++ L+ + + W R+ +A I
Sbjct: 409 SNVKSGRKKTKRHDEVNGDLENVTTTALWR-RRKSEVATI 447
>ZFIN|ZDB-GENE-070103-4 [details] [associations]
symbol:nefmb "neurofilament, medium polypeptide b"
species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
ZFIN:ZDB-GENE-070103-4 GO:GO:0005198 GO:GO:0005882
HOGENOM:HOG000230977 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
OrthoDB:EOG4VMFFD KO:K04573 EMBL:BX005158 IPI:IPI00482469
RefSeq:NP_001116752.1 UniGene:Dr.90305 ProteinModelPortal:B0S553
SMR:B0S553 GeneID:100033387 KEGG:dre:100033387 CTD:100033387
OMA:ESICTED NextBio:20787839 Bgee:B0S553 Uniprot:B0S553
Length = 717
Score = 122 (48.0 bits), Expect = 0.00051, P = 0.00051
Identities = 48/178 (26%), Positives = 85/178 (47%)
Query: 363 DGEGTINGEVNISEEGKI-NATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFT 421
+GE +V + EE ++ +EKE S K + + GKG E+E D D KE +
Sbjct: 493 EGEEEEEPQVEVIEETELCGEKSPTSEKEG-SEKEEEEDEGKGEEKE---DEDEKEDTKS 548
Query: 422 EGKNNGRKVS--EEDRIHDEQNVNREGTIDGGKINN--ETRVNEEQKANEPGKVTKGEKV 477
EG+ ++ S EE++ + + GG+ E+ EE+K G+ K +
Sbjct: 549 EGEGEKKEESGGEEEKKEESGGEEEKKEESGGEEEKKEESGGEEEKKEESAGEEAKADSE 608
Query: 478 SEEGKANDTGKVNKEVRASEGRKVS--EERNINEGKTNGVRV-NEEEKINAEGKVNGR 532
++ K +DT + K+ SE + S EE+ +E + + V V N +E+ + + +V R
Sbjct: 609 KDD-KKSDTEEDEKKSPVSEEKAESPAEEKKQDEKQVDKVVVANNKEEASPKEEVQTR 665
>DICTYBASE|DDB_G0289719 [details] [associations]
symbol:DDB_G0289719 "SFRS2-interacting protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0289719 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 EMBL:AAFI02000148 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 RefSeq:XP_636078.1
ProteinModelPortal:Q54H40 EnsemblProtists:DDB0188541 GeneID:8627288
KEGG:ddi:DDB_G0289719 eggNOG:KOG4430 InParanoid:Q54H40 OMA:ERESEHA
Uniprot:Q54H40
Length = 1419
Score = 125 (49.1 bits), Expect = 0.00055, P = 0.00055
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 371 EVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVK-----EGKFTEGKN 425
E + E+ K + EKEK+ + K E K E+EK+ + + K + K E +
Sbjct: 651 ENKLKEKEKKEEEKRKEEKEKLEREKKEKEKEKEKEKEKEKEKEKKRIEKEKKKIRENEE 710
Query: 426 NGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKAND 485
RK E+D ++ ++ K E + NEE + E + + EK +E + +
Sbjct: 711 KERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKEKEEKE 770
Query: 486 TG-KVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEK 522
K KE++ E +K +E+ + K + NEE+K
Sbjct: 771 RKEKEEKEIKEKEEKK-RKEKEEKDRKEKERKENEEKK 807
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 130 (50.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 36/120 (30%), Positives = 63/120 (52%)
Query: 363 DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTE 422
+G GE EEG+ + ++ E E+ K + E +G E+E++ + +V+EG E
Sbjct: 592 EGADEEEGEGAEEEEGEESQKEEKEEGEE--EKREQEEEEEGGEEEEEVE-EVEEGGNEE 648
Query: 423 GKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGK 482
++ G++ EEDR +E+ E T D +I N + ++ K EPG+ T+ VS+ K
Sbjct: 649 DEDEGQEEEEEDREGEEREEEEEKTKDKRRIVNNKLLQKKSKTREPGR-TENSAVSKSTK 707
Score = 37 (18.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 5 SSGAEVVPEKIEDKKDGGLTFHCNLSDTEIV 35
S+ AE +P K K D + C T +V
Sbjct: 22 SNFAENIPSKFWFKNDKPVHISCGDEHTAVV 52
>UNIPROTKB|E1C626 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0002726 "positive
regulation of T cell cytokine production" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0009898 "internal side of plasma membrane" evidence=IEA]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA] [GO:0035631
"CD40 receptor complex" evidence=IEA] [GO:0042088 "T-helper 1 type
immune response" evidence=IEA] [GO:0042102 "positive regulation of
T cell proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043011 "myeloid dendritic
cell differentiation" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0045084 "positive regulation of interleukin-12 biosynthetic
process" evidence=IEA] [GO:0045410 "positive regulation of
interleukin-6 biosynthetic process" evidence=IEA] [GO:0045453 "bone
resorption" evidence=IEA] [GO:0045672 "positive regulation of
osteoclast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IEA]
[GO:0002218 "activation of innate immune response" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling
pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=TAS] [GO:0034146 "toll-like receptor 5 signaling
pathway" evidence=TAS] [GO:0034154 "toll-like receptor 7 signaling
pathway" evidence=TAS] [GO:0035419 "activation of MAPK activity
involved in innate immune response" evidence=TAS] [GO:0035681
"toll-like receptor 15 signaling pathway" evidence=TAS] [GO:0035682
"toll-like receptor 21 signaling pathway" evidence=TAS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 Pfam:PF13639 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0048471 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0035419 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0042102 GO:GO:0004842 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0002755
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0007249
Reactome:REACT_102124 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0045672
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 Reactome:REACT_147795 GO:GO:0035681 GO:GO:0034146
GO:GO:2000679 GO:GO:0045084 GO:GO:0035682 GO:GO:0034154
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359
OMA:SEAPIRQ PANTHER:PTHR10131:SF48 EMBL:AADN02033086
IPI:IPI00571717 Ensembl:ENSGALT00000012888 Uniprot:E1C626
Length = 548
Score = 120 (47.3 bits), Expect = 0.00058, P = 0.00058
Identities = 41/171 (23%), Positives = 65/171 (38%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C F + L EHM C + CPN C + E HD CP + CE C
Sbjct: 168 CQGAFQ-KNHLKEHMTQECPRRQVCCPN--CATSMAYEDKELHDQTCPLANVFCEY-CNT 223
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHR- 292
L+R+ M H C C + A GC + + + +H + H+ + Q +
Sbjct: 224 MLIRQQMPNHYDNDCPTAPVPCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSIQNI 283
Query: 293 ----DKPLKVLKNRVEELEKSYFDKLAEAP-----DVRSLSFAIKDLEAKL 334
P+ + E + F ++ AP +V + I+ LE +L
Sbjct: 284 SVTATNPVPFINGL--PFEPALFSHVSRAPYNCNPEVENFKETIQQLEGRL 332
>ZFIN|ZDB-GENE-070705-81 [details] [associations]
symbol:epb41a "erythrocyte membrane protein band
4.1a (elliptocytosis 1, RH-linked)" species:7955 "Danio rerio"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0008092 "cytoskeletal protein binding" evidence=IEA]
InterPro:IPR000299 InterPro:IPR000798 PRINTS:PR00661
PROSITE:PS50057 ZFIN:ZDB-GENE-070705-81 GO:GO:0005737 GO:GO:0005856
eggNOG:NOG242913 HOGENOM:HOG000228841 GO:GO:0019898
Gene3D:1.20.80.10 InterPro:IPR019749 InterPro:IPR019750
InterPro:IPR014352 InterPro:IPR019748 InterPro:IPR019747
InterPro:IPR018979 Pfam:PF00373 Pfam:PF09379 PRINTS:PR00935
SMART:SM00295 SUPFAM:SSF47031 PROSITE:PS00660 PROSITE:PS00661
GeneTree:ENSGT00700000104349 EMBL:BX950225 IPI:IPI00617807
UniGene:Dr.74759 Ensembl:ENSDART00000103810 Uniprot:A5PN61
Length = 474
Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
Identities = 45/157 (28%), Positives = 65/157 (41%)
Query: 362 PDGEGTINGEVNI------SEEGKINATDKVNEKEKISNKSKPNEGG-KGNEQEKDSDGD 414
P+ E I G+V + S E + D+ + E S K + E G KG ++EK +
Sbjct: 108 PEPELRIEGDVALDQHSISSAENQQIVADQKEDAELESGKGEKGEKGEKGEKKEKKEKKE 167
Query: 415 VKEGKFTEGKNN-GRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTK 473
KE K K +K E + E+ +E K N + EE+K + K +
Sbjct: 168 KKEKKEKADKEKLEKKEKPEKKEKAEKKEKKEKKEKKEKKNEDKAKGEEEKEKDKDKEKE 227
Query: 474 GE--KVSEEGKANDTGKVNKEVRASEGRKVSEERNIN 508
E KV EE K D G EV+ E K E+ N
Sbjct: 228 KEQEKVEEEPKPEDAGAAETEVKEEEEEKEEEKEEKN 264
>UNIPROTKB|Q13114 [details] [associations]
symbol:TRAF3 "TNF receptor-associated factor 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0030162 "regulation of proteolysis" evidence=IMP] [GO:0033209
"tumor necrosis factor-mediated signaling pathway" evidence=IMP]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001817 "regulation of cytokine production" evidence=ISS]
[GO:0032648 "regulation of interferon-beta production"
evidence=ISS] [GO:0050688 "regulation of defense response to virus"
evidence=ISS] [GO:0002224 "toll-like receptor signaling pathway"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0031996 "thioesterase binding" evidence=IPI]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0006917
"induction of apoptosis" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS]
[GO:0035666 "TRIF-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0009898 "internal side of plasma membrane" evidence=ISS]
[GO:0035631 "CD40 receptor complex" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027128 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0005739 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0006917 GO:GO:0046872 GO:GO:0005768
GO:GO:0008270 GO:GO:0030162 GO:GO:0045087 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0032088 GO:GO:0033209
GO:GO:0004842 EMBL:AL117209 GO:GO:0009898 InterPro:IPR017907
GO:GO:0008063 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
GO:GO:0032480 SUPFAM:SSF49599 GO:GO:0035631 CleanEx:HS_CAP1
GO:GO:0050688 Gene3D:3.90.890.10 GO:GO:0032648 PDB:1KZZ PDB:1L0A
PDBsum:1KZZ PDBsum:1L0A Orphanet:1930 PDB:1RF3 PDBsum:1RF3 PDB:1FLL
PDBsum:1FLL HOVERGEN:HBG058222 EMBL:U15637 EMBL:U19260 EMBL:L38509
EMBL:U21092 EMBL:BX247977 EMBL:AK303172 EMBL:BC075087 EMBL:BC075086
EMBL:AF110908 IPI:IPI00297473 IPI:IPI00973170 PIR:A55960 PIR:S68467
RefSeq:NP_001186356.1 RefSeq:NP_003291.2 RefSeq:NP_663777.1
RefSeq:NP_663778.1 UniGene:Hs.510528 PDB:1FLK PDB:1ZMS PDB:2ECY
PDB:2GKW PDBsum:1FLK PDBsum:1ZMS PDBsum:2ECY PDBsum:2GKW
ProteinModelPortal:Q13114 SMR:Q13114 DIP:DIP-6222N IntAct:Q13114
MINT:MINT-1144408 STRING:Q13114 PhosphoSite:Q13114 DMDM:116242824
PaxDb:Q13114 PRIDE:Q13114 Ensembl:ENST00000392745
Ensembl:ENST00000539721 Ensembl:ENST00000560371 GeneID:7187
KEGG:hsa:7187 UCSC:uc001ymc.2 UCSC:uc010txy.2 CTD:7187
GeneCards:GC14P103243 HGNC:HGNC:12033 HPA:HPA002933 MIM:601896
MIM:614849 neXtProt:NX_Q13114 PharmGKB:PA36710 eggNOG:NOG239194
InParanoid:Q13114 KO:K03174 OMA:YGCTFQG OrthoDB:EOG4JWVD7
PhylomeDB:Q13114 ChiTaRS:TRAF3 EvolutionaryTrace:Q13114
GenomeRNAi:7187 NextBio:28176 PMAP-CutDB:Q13114 ArrayExpress:Q13114
Bgee:Q13114 CleanEx:HS_TRAF3 Genevestigator:Q13114
GermOnline:ENSG00000131323 PANTHER:PTHR10131:SF45 Uniprot:Q13114
Length = 568
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 44/163 (26%), Positives = 72/163 (44%)
Query: 159 IAHIL--LKNVDFKNEFHCNMKFNSEK----ELNEHMLH-CGFISMICPNEGCNAKFSAG 211
+ H+L LKN E C EK +L +H+ C + C + C ++
Sbjct: 130 LGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSH--CKSQVPMI 187
Query: 212 HLEKH-DSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC--QSTIP 267
L+KH D+ CP ++ C KC TL+R ++ H ++ C + C F GC Q T
Sbjct: 188 ALQKHEDTDCPCVVVSCPHKCSVQTLLRSELSAH-LSECVNAPSTCSFKRYGCVFQGTNQ 246
Query: 268 QCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKS 309
Q I+ H H+ + + + +K + +L+N E KS
Sbjct: 247 Q--IKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKS 287
>TAIR|locus:2038648 [details] [associations]
symbol:NF-YB11 ""nuclear factor Y, subunit B11""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC006232 KO:K02326
OMA:HANEATL HSSP:Q13952 EMBL:BT004083 IPI:IPI00535292 PIR:C84673
RefSeq:NP_180316.1 UniGene:At.26474 UniGene:At.48523
ProteinModelPortal:Q9ZQH2 SMR:Q9ZQH2 PaxDb:Q9ZQH2 PRIDE:Q9ZQH2
EnsemblPlants:AT2G27470.1 GeneID:817292 KEGG:ath:AT2G27470
TAIR:At2g27470 eggNOG:NOG301039 HOGENOM:HOG000154037
InParanoid:Q9ZQH2 PhylomeDB:Q9ZQH2 ProtClustDB:CLSN2913083
ArrayExpress:Q9ZQH2 Genevestigator:Q9ZQH2 Uniprot:Q9ZQH2
Length = 275
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 40/148 (27%), Positives = 63/148 (42%)
Query: 389 KEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTI 448
K SKP E K ++E + ++ K E + +E D +E+N N E
Sbjct: 122 KSSSGTASKPKETKKRKQEEPSTQKGARKSKIDEETKRNDEETENDNT-EEENGNDEEDE 180
Query: 449 DGGKINNETRVNEEQKANEPGKVTKG--EKVSEEGKANDTGKVNKEVRASEGRKVSEERN 506
+G N+E N+++ E G + E E G + K ++E E SEE
Sbjct: 181 NG---NDEEDENDDENTEENGNDEENDDENTEENGNDEENEKEDEENSMEENGNESEESG 237
Query: 507 INEGKT---NGVRVNEEEKINAEGKVNG 531
NE + NG V E+ + N +G V+G
Sbjct: 238 -NEDHSMEENGSGVGEDNE-NEDGSVSG 263
>GENEDB_PFALCIPARUM|PF11_0242 [details] [associations]
symbol:PF11_0242 "protein kinase" species:5833
"Plasmodium falciparum" [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00169 InterPro:IPR000719 InterPro:IPR001849
InterPro:IPR002048 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50003 PROSITE:PS50011 PROSITE:PS50222
SMART:SM00220 SMART:SM00233 Prosite:PS00018 GO:GO:0005524
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 SUPFAM:SSF56112
GO:GO:0004674 InterPro:IPR018247 HSSP:P49137 EMBL:AE014186
RefSeq:XP_001347913.1 ProteinModelPortal:Q8IID2 IntAct:Q8IID2
MINT:MINT-1618127 PRIDE:Q8IID2 EnsemblProtists:PF11_0242:mRNA
GeneID:810789 KEGG:pfa:PF11_0242 EuPathDB:PlasmoDB:PF3D7_1123100
HOGENOM:HOG000282345 Uniprot:Q8IID2
Length = 2265
Score = 126 (49.4 bits), Expect = 0.00071, P = 0.00071
Identities = 48/156 (30%), Positives = 73/156 (46%)
Query: 377 EGKINATDKVNEKEK----ISNKSKPNEGGKGNEQ----EKDSDGDVKEGKFTEGKNNGR 428
+GK A D + KEK I K KP + K EQ K+ D +KE + +EGK N +
Sbjct: 482 KGKNKADDNIKRKEKGDDEIKRKDKPLDDIKEKEQIKYEAKNKDHKMKE-EISEGKENLK 540
Query: 429 KVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTK-GEKVSEEGKANDTG 487
E + E+N + E DG K N + N++ + + G+ K GEK EEGK +
Sbjct: 541 YKDVEKKKDGEKNKDGEKNKDGEK-NKDGEKNKDGEKKKDGEKKKDGEK--EEGKNEE-- 595
Query: 488 KVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKI 523
K N+E + K +IN K + ++ K+
Sbjct: 596 KENEEENKIKKEKCFTRNDINIYKKEKKKEKKKNKL 631
>UNIPROTKB|Q8IID2 [details] [associations]
symbol:PF11_0242 "Calcium-dependent protein kinase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] Pfam:PF00169 InterPro:IPR000719
InterPro:IPR001849 InterPro:IPR002048 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50003
PROSITE:PS50011 PROSITE:PS50222 SMART:SM00220 SMART:SM00233
Prosite:PS00018 GO:GO:0005524 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR018247
HSSP:P49137 EMBL:AE014186 RefSeq:XP_001347913.1
ProteinModelPortal:Q8IID2 IntAct:Q8IID2 MINT:MINT-1618127
PRIDE:Q8IID2 EnsemblProtists:PF11_0242:mRNA GeneID:810789
KEGG:pfa:PF11_0242 EuPathDB:PlasmoDB:PF3D7_1123100
HOGENOM:HOG000282345 Uniprot:Q8IID2
Length = 2265
Score = 126 (49.4 bits), Expect = 0.00071, P = 0.00071
Identities = 48/156 (30%), Positives = 73/156 (46%)
Query: 377 EGKINATDKVNEKEK----ISNKSKPNEGGKGNEQ----EKDSDGDVKEGKFTEGKNNGR 428
+GK A D + KEK I K KP + K EQ K+ D +KE + +EGK N +
Sbjct: 482 KGKNKADDNIKRKEKGDDEIKRKDKPLDDIKEKEQIKYEAKNKDHKMKE-EISEGKENLK 540
Query: 429 KVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTK-GEKVSEEGKANDTG 487
E + E+N + E DG K N + N++ + + G+ K GEK EEGK +
Sbjct: 541 YKDVEKKKDGEKNKDGEKNKDGEK-NKDGEKNKDGEKKKDGEKKKDGEK--EEGKNEE-- 595
Query: 488 KVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKI 523
K N+E + K +IN K + ++ K+
Sbjct: 596 KENEEENKIKKEKCFTRNDINIYKKEKKKEKKKNKL 631
>UNIPROTKB|E1BRJ5 [details] [associations]
symbol:E1BRJ5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007250 "activation of NF-kappaB-inducing
kinase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0030323 "respiratory tube development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031996 "thioesterase binding" evidence=IEA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA]
[GO:0050699 "WW domain binding" evidence=IEA] [GO:0090073 "positive
regulation of protein homodimerization activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR027138 PROSITE:PS50145 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0046330
GO:GO:0045860 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
GO:GO:0090073 GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF46
EMBL:AADN02025861 EMBL:AADN02025862 IPI:IPI00599117
Ensembl:ENSGALT00000006350 OMA:HIETCEY Uniprot:E1BRJ5
Length = 269
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 26/101 (25%), Positives = 43/101 (42%)
Query: 185 LNEHML-HCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDR 242
L++H L C + C C +F ++ H CP +PC +C + R D+
Sbjct: 164 LSQHTLSECPKRTQPCTY--CAKEFVFDTIQNHQYQCPRYPVPCPNQCGTPNIAREDVPT 221
Query: 243 HCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
H C + CPF GC+ P+ + +H + +HL
Sbjct: 222 HLKESCSTAMLLCPFKEAGCKHRCPKLAMGRHLEESTKAHL 262
>UNIPROTKB|F1MDC1 [details] [associations]
symbol:LOC505941 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR007794 Pfam:PF05104 GO:GO:0015031
GO:GO:0030176 OMA:QNQAKKG GeneTree:ENSGT00530000063895
EMBL:DAAA02035709 EMBL:DAAA02035710 EMBL:DAAA02035711
IPI:IPI00924056 Ensembl:ENSBTAT00000061585 ArrayExpress:F1MDC1
Uniprot:F1MDC1
Length = 1554
Score = 124 (48.7 bits), Expect = 0.00077, P = 0.00077
Identities = 48/170 (28%), Positives = 76/170 (44%)
Query: 377 EGKINATDKVNEKEKISNKSK--PNEGGK---GNEQEKDSDGDVKEGKFTEG-KNNGRKV 430
EG N K + KS+ PN+G K G Q K S+G +G+ EG +N G+K
Sbjct: 513 EGAQNQGKKAEGNQNQGKKSEGTPNQGKKAEGGQNQGKKSEGAQNQGRKAEGAQNQGKKA 572
Query: 431 ----SEEDRIHDEQNVNR--EGTIDGGKINNETRVNEEQKAN-EPGKVTKGEKVSEEG-K 482
++ + QN + EG + GK+ E N+ +KA+ P + K E +G K
Sbjct: 573 EGAQNQGKKAEGNQNQGKKAEGNQNQGKMV-EVVQNQSKKADGTPNQGKKAEGAQNQGRK 631
Query: 483 ANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKVNGR 532
A T K+ ++ + E N+GK N+ K+ A G+ G+
Sbjct: 632 AEGTPNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGRKVEA-GQNQGK 680
>UNIPROTKB|H0YL25 [details] [associations]
symbol:TRAF3 "TNF receptor-associated factor 3"
species:9606 "Homo sapiens" [GO:0001817 "regulation of cytokine
production" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008063 "Toll signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0050688 "regulation of defense response
to virus" evidence=IEA] InterPro:IPR001293 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR027128 PROSITE:PS50145 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 EMBL:AL117209 SUPFAM:SSF49599
Gene3D:3.90.890.10 HGNC:HGNC:12033 ChiTaRS:TRAF3
PANTHER:PTHR10131:SF45 EMBL:AL132801 Ensembl:ENST00000558700
Bgee:H0YL25 Uniprot:H0YL25
Length = 207
Score = 111 (44.1 bits), Expect = 0.00079, P = 0.00079
Identities = 42/158 (26%), Positives = 68/158 (43%)
Query: 159 IAHIL--LKNVDFKNEFHCNMKFNSEK----ELNEHMLH-CGFISMICPNEGCNAKFSAG 211
+ H+L LKN E C EK +L +H+ C + C + C ++
Sbjct: 45 LGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSH--CKSQVPMI 102
Query: 212 HLEKH-DSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFYAVGC--QSTIP 267
L+KH D+ CP ++ C KC TL+R ++ H ++ C + C F GC Q T
Sbjct: 103 ALQKHEDTDCPCVVVSCPHKCSVQTLLRSELSAH-LSECVNAPSTCSFKRYGCVFQGTNQ 161
Query: 268 QCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEE 305
Q I+ H H+ +L++ K +N+ E
Sbjct: 162 Q--IKAHEASSAVQHV-NLLKEWSNSLEKKGYENKESE 196
>RGD|1560136 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10116 "Rattus norvegicus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005929
"cilium" evidence=ISO] [GO:0007601 "visual perception"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0042384 "cilium assembly" evidence=ISO] [GO:0042462 "eye
photoreceptor cell development" evidence=ISO] RGD:1560136
EMBL:AY855168 IPI:IPI00361392 UniGene:Rn.103641 UniGene:Rn.215816
UCSC:RGD:1560136 Genevestigator:Q56PB7 Uniprot:Q56PB7
Length = 572
Score = 119 (46.9 bits), Expect = 0.00079, P = 0.00079
Identities = 44/178 (24%), Positives = 80/178 (44%)
Query: 364 GEGTINGEVN-ISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQE-KDSDGDVKEGKFT 421
G+ GE I E+G + V + +++ K + +G KG + D +G ++ +
Sbjct: 60 GDSGSEGERGQIREKGSLG----VQQWQRVQEKQERRKG-KGKQSHILDMEGKGEDEGWE 114
Query: 422 EGKNNGRKVSEEDRIHDEQNVN---REGTIDGGKINNETRVNEEQKANEPGKVTKGEKVS 478
+G G K+ + +E+N RE +G + +E + EE++ E + E+
Sbjct: 115 KGGEGGEKMERNEGNREERNQEMEEREAGDEGSEKEDEEKEEEEEEEEEEEEEENPEEKG 174
Query: 479 EEGKANDTGKVNKEVRASEGRKVSEE--RNINEGKTNGVRVNE---EEKINAEGKVNG 531
EEG+ G ++ R EG + +E R EG+ + E EE+I EG+ G
Sbjct: 175 EEGQEEGEGTSEEQSREEEGNRQEKEGGREEKEGQEDEKEREELEREEEIE-EGEEEG 231
>TAIR|locus:2093197 [details] [associations]
symbol:MBD11 "methyl-CPG-binding domain 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008327 "methyl-CpG binding"
evidence=ISS] InterPro:IPR001739 InterPro:IPR016177 Pfam:PF01429
PROSITE:PS50982 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351
SUPFAM:SSF54171 EMBL:AB017071 Gene3D:3.30.890.10 GO:GO:0008327
EMBL:AK227060 EMBL:BT015051 EMBL:BT033124 IPI:IPI00528786
RefSeq:NP_188200.1 UniGene:At.38991 ProteinModelPortal:Q9LW00
SMR:Q9LW00 PaxDb:Q9LW00 PRIDE:Q9LW00 ProMEX:Q9LW00
EnsemblPlants:AT3G15790.1 GeneID:820822 KEGG:ath:AT3G15790
TAIR:At3g15790 eggNOG:NOG305785 HOGENOM:HOG000091146
InParanoid:Q9LW00 OMA:RNHEENG PhylomeDB:Q9LW00
ProtClustDB:CLSN2915686 Genevestigator:Q9LW00 Uniprot:Q9LW00
Length = 254
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 51/184 (27%), Positives = 80/184 (43%)
Query: 366 GTINGEVNISEEGKINAT-DKVNEKEK------ISNKSKPNE----GGKGNEQEKDSDGD 414
GT ISE+ K + DK K++ +S K E GG+ N KD++ +
Sbjct: 73 GTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMN 132
Query: 415 VKEGKFTEGKNNGRK--VSEEDRIHD-EQNVNREGTIDGGKINNETRVNEEQ---KANEP 468
EG E +N K E +R++D ++N+ E T + + E +E+ ++
Sbjct: 133 PPEG-IAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMKEKALDSVDDK 191
Query: 469 GKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKIN-AEG 527
K T EK + + N K V AS+ +K SE N + NG+ E K AEG
Sbjct: 192 SKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNH-EENGLTTEAEGKEKTAEG 250
Query: 528 KVNG 531
+ G
Sbjct: 251 EATG 254
>RGD|620080 [details] [associations]
symbol:Slc24a1 "solute carrier family 24
(sodium/potassium/calcium exchanger), member 1" species:10116
"Rattus norvegicus" [GO:0007601 "visual perception" evidence=IEA]
[GO:0008273 "calcium, potassium:sodium antiporter activity"
evidence=IEA;IDA] [GO:0015293 "symporter activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0031226
"intrinsic to plasma membrane" evidence=IDA] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0070588 "calcium ion transmembrane
transport" evidence=IDA] InterPro:IPR004817 InterPro:IPR004837
Pfam:PF01699 RGD:620080 GO:GO:0016021 GO:GO:0007601 GO:GO:0015293
GO:GO:0050896 GO:GO:0031226 eggNOG:COG0530 CTD:9187
HOGENOM:HOG000231933 HOVERGEN:HBG104097 KO:K13749 GO:GO:0008273
InterPro:IPR004481 PANTHER:PTHR10846 PANTHER:PTHR10846:SF7
TIGRFAMs:TIGR00927 TIGRFAMs:TIGR00367 OrthoDB:EOG498V0V
EMBL:AF176688 EMBL:U49235 IPI:IPI00215161 IPI:IPI00231152
IPI:IPI00231153 IPI:IPI00767564 RefSeq:NP_064475.1
UniGene:Rn.205732 ProteinModelPortal:Q9QZM6 PRIDE:Q9QZM6
GeneID:56814 KEGG:rno:56814 UCSC:RGD:620080 NextBio:611219
ArrayExpress:Q9QZM6 Genevestigator:Q9QZM6 Uniprot:Q9QZM6
Length = 1181
Score = 122 (48.0 bits), Expect = 0.00093, P = 0.00093
Identities = 49/173 (28%), Positives = 76/173 (43%)
Query: 363 DGEGTINGEVNISEEGKINATDKVN-EKEKISNKSKPNEGGKGNEQEKDS-DGDVK-EGK 419
+GE E EEG+ A K + ++E+ K K + G+ + KD +G+ + EGK
Sbjct: 726 EGERETEAEGKKDEEGETEAERKEDGQEEETETKGKEKQEGETESEGKDEQEGETEAEGK 785
Query: 420 FTEGKNNGRKVSEEDRIHDEQNVNREGTIDG--GKINNETR-VNEEQKANEPGKVTKGEK 476
E + G +E + E EGT D G+ E + V +E + GK + E
Sbjct: 786 --EADHEGETEAEGKEVEHEGETEAEGTEDEQEGETEAEGKEVEQEGETEAEGKEVEHE- 842
Query: 477 VSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKV 529
V E + +T E A EG++ E E + G V + + AEGKV
Sbjct: 843 VETEAERKETNHEG-ETEA-EGKEADHE---GETEAEG-NVEHQGETEAEGKV 889
>UNIPROTKB|Q9QZM6 [details] [associations]
symbol:Slc24a1 "Sodium/potassium/calcium exchanger 1"
species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR004817 InterPro:IPR004837
Pfam:PF01699 RGD:620080 GO:GO:0016021 GO:GO:0007601 GO:GO:0015293
GO:GO:0050896 GO:GO:0031226 eggNOG:COG0530 CTD:9187
HOGENOM:HOG000231933 HOVERGEN:HBG104097 KO:K13749 GO:GO:0008273
InterPro:IPR004481 PANTHER:PTHR10846 PANTHER:PTHR10846:SF7
TIGRFAMs:TIGR00927 TIGRFAMs:TIGR00367 OrthoDB:EOG498V0V
EMBL:AF176688 EMBL:U49235 IPI:IPI00215161 IPI:IPI00231152
IPI:IPI00231153 IPI:IPI00767564 RefSeq:NP_064475.1
UniGene:Rn.205732 ProteinModelPortal:Q9QZM6 PRIDE:Q9QZM6
GeneID:56814 KEGG:rno:56814 UCSC:RGD:620080 NextBio:611219
ArrayExpress:Q9QZM6 Genevestigator:Q9QZM6 Uniprot:Q9QZM6
Length = 1181
Score = 122 (48.0 bits), Expect = 0.00093, P = 0.00093
Identities = 49/173 (28%), Positives = 76/173 (43%)
Query: 363 DGEGTINGEVNISEEGKINATDKVN-EKEKISNKSKPNEGGKGNEQEKDS-DGDVK-EGK 419
+GE E EEG+ A K + ++E+ K K + G+ + KD +G+ + EGK
Sbjct: 726 EGERETEAEGKKDEEGETEAERKEDGQEEETETKGKEKQEGETESEGKDEQEGETEAEGK 785
Query: 420 FTEGKNNGRKVSEEDRIHDEQNVNREGTIDG--GKINNETR-VNEEQKANEPGKVTKGEK 476
E + G +E + E EGT D G+ E + V +E + GK + E
Sbjct: 786 --EADHEGETEAEGKEVEHEGETEAEGTEDEQEGETEAEGKEVEQEGETEAEGKEVEHE- 842
Query: 477 VSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKV 529
V E + +T E A EG++ E E + G V + + AEGKV
Sbjct: 843 VETEAERKETNHEG-ETEA-EGKEADHE---GETEAEG-NVEHQGETEAEGKV 889
>UNIPROTKB|A6NHG8 [details] [associations]
symbol:TRAF3 "TNF receptor-associated factor 3"
species:9606 "Homo sapiens" [GO:0001817 "regulation of cytokine
production" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008063 "Toll signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0050688 "regulation of defense response
to virus" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AL117209 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 HOVERGEN:HBG058222
RefSeq:NP_663778.1 UniGene:Hs.510528 GeneID:7187 KEGG:hsa:7187
CTD:7187 HGNC:HGNC:12033 PharmGKB:PA36710 KO:K03174 ChiTaRS:TRAF3
GenomeRNAi:7187 NextBio:28176 PANTHER:PTHR10131:SF45
HOGENOM:HOG000231557 EMBL:AL132801 IPI:IPI00744216 SMR:A6NHG8
STRING:A6NHG8 Ensembl:ENST00000347662 Ensembl:ENST00000351691
UCSC:uc001yme.2 Uniprot:A6NHG8
Length = 543
Score = 118 (46.6 bits), Expect = 0.00095, P = 0.00095
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P +Q+H D
Sbjct: 173 REATCSH----CKSQVPMIALQKHEDTD 196
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.132 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 533 518 0.00089 119 3 11 23 0.47 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 112
No. of states in DFA: 612 (65 KB)
Total size of DFA: 297 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.24u 0.12s 61.36t Elapsed: 00:00:03
Total cpu time: 61.26u 0.12s 61.38t Elapsed: 00:00:03
Start: Fri May 10 04:35:02 2013 End: Fri May 10 04:35:05 2013
WARNINGS ISSUED: 1