BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009502
(533 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356570927|ref|XP_003553634.1| PREDICTED: uncharacterized protein LOC100799182 [Glycine max]
Length = 528
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 220/348 (63%), Positives = 279/348 (80%), Gaps = 1/348 (0%)
Query: 1 MDVTSSGAEVVPEKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFR 60
MD+ + ++ PEK+ED+K GG HC+L DTE+VHK+AQ FLPGLASACVDNT+GD+F+
Sbjct: 7 MDMPTIDVDLGPEKLEDEKQGGPLLHCDLCDTEVVHKLAQMFLPGLASACVDNTSGDLFK 66
Query: 61 TPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN 120
TPGSVAV +R EM+EY+T+RSE+FVAESVILE E SDHP+DIISDFVD+F SKRN
Sbjct: 67 TPGSVAVDLRKEMIEYVTQRSESFVAESVILEGGPDGEESDHPFDIISDFVDDFVSSKRN 126
Query: 121 LFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFN 180
LFSRVSGW+ SEKREDRIDDF+QEME++GFW+++RRE IA LLKNVDF+N +HCNM FN
Sbjct: 127 LFSRVSGWLLSEKREDRIDDFVQEMEMNGFWTLDRRETIAETLLKNVDFENSYHCNMSFN 186
Query: 181 SEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDM 240
S +EL H+ +C F +MIC NEGCN++F A HL+ HDS CPFKIIPCEQKC D +MRR+M
Sbjct: 187 SAEELVNHVDNCNFRTMICENEGCNSRFCAAHLKNHDSTCPFKIIPCEQKCSDCIMRREM 246
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
DRHCIT+C MKL NCPFY VGC+S + QCMI++HR DD+ SHL ++L+ +++ LK
Sbjct: 247 DRHCITICPMKLVNCPFYVVGCRSAVAQCMIEKHRLDDVHSHLWHLLKGIYKQAYGDDLK 306
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGE 348
RVE++ + +LAEA DVRSL+F +KD+EAKLGPFK + + + E
Sbjct: 307 RRVEQIVQVSL-RLAEARDVRSLNFIVKDIEAKLGPFKVSVLEKNNAE 353
>gi|225441571|ref|XP_002276694.1| PREDICTED: uncharacterized protein LOC100246957 [Vitis vinifera]
gi|297739780|emb|CBI29962.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/367 (63%), Positives = 283/367 (77%), Gaps = 2/367 (0%)
Query: 1 MDVTSSGAEVVPEKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFR 60
MD+ + V+PEK ED K G +F C+ DTEIVHKIAQ LPGLASACVDNTTGD+FR
Sbjct: 1 MDLPAIDVGVIPEKFEDVKVEGPSFPCDFFDTEIVHKIAQALLPGLASACVDNTTGDLFR 60
Query: 61 TPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN 120
+P SVAV IR EMVEYLT+RSE+FVAESVILED EVSDHP+DIISDFVD+FA SKRN
Sbjct: 61 SPASVAVDIRKEMVEYLTQRSESFVAESVILEDGPDTEVSDHPFDIISDFVDDFASSKRN 120
Query: 121 LFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFN 180
LFSRVSGW+ SE+RED+IDDF+QEMEI+ FW ++RR AIA LLKN DFKN FHCNM F+
Sbjct: 121 LFSRVSGWLLSERREDKIDDFVQEMEINSFWLLDRRAAIAQTLLKNADFKNTFHCNMNFS 180
Query: 181 SEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDM 240
S +EL+EH +C F SM C NEGCN+ F A H+EKHDSVCPFKIIPCEQ+C + LMRR+M
Sbjct: 181 SAEELDEHRSNCSFRSMNCMNEGCNSSFCAAHMEKHDSVCPFKIIPCEQQCSENLMRREM 240
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
DRHCITVC MKL NCPFY++GCQST+ CM++QH+ D+L SHLL +LQ H+D ++ LK
Sbjct: 241 DRHCITVCPMKLVNCPFYSIGCQSTVHHCMVEQHQSDNLDSHLLCVLQVTHKDVSVEDLK 300
Query: 301 NRVEEL-EKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEGKVNEEKKINE 359
RVE+L E S +LAEA +VRSL+ A+K+LE+KLGP E TV + E + +
Sbjct: 301 QRVEQLKELSSPSELAEAKNVRSLTSAVKNLESKLGPL-EVTVPKTVSEKNTETSDSVAQ 359
Query: 360 VKPDGEG 366
+ + E
Sbjct: 360 IPVEAES 366
>gi|356503879|ref|XP_003520728.1| PREDICTED: uncharacterized protein LOC100819268 [Glycine max]
Length = 521
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 259/528 (49%), Positives = 347/528 (65%), Gaps = 29/528 (5%)
Query: 1 MDVTSSGAEVVPEKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFR 60
MD+ + ++ PEK+ED+K GG HC+L DTE+VHK+AQ FLPGLASACVDNT+GD+F+
Sbjct: 1 MDMPTIDVDLGPEKLEDEKQGGPLLHCDLCDTEVVHKLAQMFLPGLASACVDNTSGDLFK 60
Query: 61 TPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN 120
TPGSVAV +R EM+EY+T+RSE+FVAESVILE EVSDHP+DIIS+ VD+F SKRN
Sbjct: 61 TPGSVAVDLRKEMIEYVTQRSESFVAESVILEGSPDGEVSDHPFDIISNLVDDFVSSKRN 120
Query: 121 LFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFN 180
LFSRVSGW+ SEKRED+IDDF+QEME++GFW+++RRE IA LLKNVDF+N +HCNM FN
Sbjct: 121 LFSRVSGWLLSEKREDKIDDFVQEMEMNGFWTLDRREIIAETLLKNVDFENSYHCNMSFN 180
Query: 181 SEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDM 240
S +EL H+ +C F +MIC NEGCN++F A HL+ HDS C FKII CEQKC D++MRR+M
Sbjct: 181 SAEELANHVDNCNFRTMICENEGCNSRFCAAHLKNHDSTCAFKIIACEQKCSDSIMRREM 240
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
DRHCITVC MKL CPFY VGC+S + QCMI++H DD+ SHL ++L+ +++ LK
Sbjct: 241 DRHCITVCPMKLVKCPFYVVGCRSAVAQCMIEKHCLDDVNSHLWHLLKGIYKKAYGDDLK 300
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEGKVNEEKKINEV 360
RVE++ + +LAEA DVRSL+F +KD+EAKLGPFK V + +GE V
Sbjct: 301 RRVEQIVQVSL-RLAEARDVRSLNFIVKDIEAKLGPFKVSAVEKNNGET----------V 349
Query: 361 KPDGEGTINGEVNIS-EEGKINATDKVN--EKEKISNKSKPNEGGKGNEQEKDSDGDVKE 417
+G+G GE +++ E + A+D VN +K ++S N + E ++
Sbjct: 350 TKNGQGE-GGETDMNGREKSMKASDMVNSPDKAELSGMVNMNNAENTTKNEDRESVPLEN 408
Query: 418 GKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKV 477
F E + D+ E + +I ++ + K NE T+ EK+
Sbjct: 409 KGFEEIAQTSNMTNLSDKT--------EVGLPNDEIKDDADSELKIKGNEESTQTQKEKL 460
Query: 478 S-EEGKANDTGKVNKEVRASEGRKVSEER--NINEGKT-NGVRVNEEE 521
S EE A D G N+E + K+S E+ NEG N ++ N E
Sbjct: 461 SNEEVSATDKG--NEESTQTHKEKLSNEKVSATNEGSAENSIKSNYNE 506
>gi|224138162|ref|XP_002322745.1| predicted protein [Populus trichocarpa]
gi|222867375|gb|EEF04506.1| predicted protein [Populus trichocarpa]
Length = 395
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/348 (64%), Positives = 276/348 (79%), Gaps = 3/348 (0%)
Query: 1 MDVTSSGAEVVPEKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFR 60
MD+ ++ E+V E D+K+ GLTFHC L DTEIV KIAQ FLPGL+SACVDNTTGD+FR
Sbjct: 1 MDLPTNDVELVRE---DEKERGLTFHCELYDTEIVRKIAQAFLPGLSSACVDNTTGDMFR 57
Query: 61 TPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN 120
PGSVA IR EMV+YLT+RSE+FVAESV+LE EVSDHPYDIIS+ VD+FA KRN
Sbjct: 58 NPGSVAADIRKEMVDYLTQRSESFVAESVVLEGDLDGEVSDHPYDIISNMVDDFASLKRN 117
Query: 121 LFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFN 180
LFSRVSGW+ SEKRED+IDDF+QEMEI+GFW ++RREA+A IL+KNVDFKN FHC+ KFN
Sbjct: 118 LFSRVSGWLLSEKREDKIDDFVQEMEINGFWLLDRREAVAQILVKNVDFKNIFHCDKKFN 177
Query: 181 SEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDM 240
+ +EL EH+++CGF +M C NEGC+ F A HLEKHDS CPFKIIPCEQ+C + +MRR+M
Sbjct: 178 TAEELVEHVVNCGFRTMNCTNEGCSTVFCASHLEKHDSACPFKIIPCEQQCSENIMRREM 237
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
DRHCITVC MK+ +CPFYAVGCQST+P +IQQHR D+L SHLLY L+ +H+ + LK
Sbjct: 238 DRHCITVCPMKIVSCPFYAVGCQSTMPHSIIQQHRSDNLHSHLLYTLKSIHKGGSEEDLK 297
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGE 348
RV+++ +S +LA+A D RSL +KD+EAKLGP + + S E
Sbjct: 298 KRVDQIVESSPGRLADARDARSLILKVKDVEAKLGPLEVKAAEKVSEE 345
>gi|255570449|ref|XP_002526183.1| hypothetical protein RCOM_0763260 [Ricinus communis]
gi|223534487|gb|EEF36187.1| hypothetical protein RCOM_0763260 [Ricinus communis]
Length = 417
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/344 (63%), Positives = 269/344 (78%), Gaps = 2/344 (0%)
Query: 8 AEVVPEK--IEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSV 65
E+VPEK IED K+G +FHC+L D EIVHKIAQ LPGLA+ACVDNTTG IFR+P SV
Sbjct: 4 VELVPEKEKIEDGKEGCPSFHCDLYDAEIVHKIAQVLLPGLAAACVDNTTGGIFRSPASV 63
Query: 66 AVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRV 125
AV +R EM++YLT+RSE+FVAES+ILED EVSDHPYDII+DFVD+FA SKRN FSRV
Sbjct: 64 AVDLRKEMIDYLTQRSESFVAESIILEDGPNTEVSDHPYDIIADFVDDFASSKRNFFSRV 123
Query: 126 SGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKEL 185
SGW+ SEKRED +DDF QEMEI+GFW ++RRE +A L+KNVDFKN FHC+ KFN+ +EL
Sbjct: 124 SGWLLSEKREDNVDDFAQEMEINGFWLMDRRELVAQTLVKNVDFKNTFHCDKKFNTAEEL 183
Query: 186 NEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCI 245
H+++C F SM C NEGCNA F A HLE HDS+CPFKIIPCEQKC D +MRR+MDRHCI
Sbjct: 184 ARHVVNCNFRSMNCRNEGCNAIFCASHLENHDSICPFKIIPCEQKCSDNIMRREMDRHCI 243
Query: 246 TVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEE 305
TVC MKL NCPFYAVGCQSTI + MIQ+H DDL HL+ L+ +H+ + LK RV++
Sbjct: 244 TVCPMKLVNCPFYAVGCQSTIARHMIQKHCSDDLQLHLVCALKNIHKGASEEDLKQRVDQ 303
Query: 306 LEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEG 349
+ +S +L D RSL+ ++DL++KLGP + +T N+ S EG
Sbjct: 304 IVQSSSGQLDATRDARSLTLRVRDLDSKLGPLEANTANKSSEEG 347
>gi|145338396|ref|NP_187801.3| homogentisate solanesyltransferase [Arabidopsis thaliana]
gi|334185269|ref|NP_001189865.1| homogentisate solanesyltransferase [Arabidopsis thaliana]
gi|6671951|gb|AAF23211.1|AC016795_24 hypothetical protein [Arabidopsis thaliana]
gi|10998134|dbj|BAB03105.1| unnamed protein product [Arabidopsis thaliana]
gi|110741563|dbj|BAE98730.1| hypothetical protein [Arabidopsis thaliana]
gi|332641606|gb|AEE75127.1| homogentisate solanesyltransferase [Arabidopsis thaliana]
gi|332641607|gb|AEE75128.1| homogentisate solanesyltransferase [Arabidopsis thaliana]
Length = 572
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/383 (56%), Positives = 277/383 (72%), Gaps = 6/383 (1%)
Query: 13 EKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTE 72
E IED+K+GG +FHC+L DT++VHKIAQ FLPGLA+ACVDNTTGDIFR+PGSVA IR E
Sbjct: 9 ESIEDQKEGGPSFHCDLYDTQVVHKIAQVFLPGLATACVDNTTGDIFRSPGSVAADIRKE 68
Query: 73 MVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSE 132
M+EYLT+RSETFVAE ++L+ + E S P+DIISDF+D+FA SKRNLFSRVSGWM SE
Sbjct: 69 MIEYLTRRSETFVAEHIVLQGGSEIEASHDPFDIISDFIDDFATSKRNLFSRVSGWMLSE 128
Query: 133 KREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHC 192
+RED IDDF QEMEISGFW + RE IA LLKNVDFK+ HC MKF +E EL EH ++C
Sbjct: 129 RREDNIDDFAQEMEISGFWLTDHREGIAQTLLKNVDFKSSAHCEMKFQTEGELAEHAMNC 188
Query: 193 GFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKL 252
G+ +M C NEGC A F A +E HDSVCPFKIIPCEQ C +++MRRDMDRHCITVC MKL
Sbjct: 189 GYRTMNCENEGCTAVFCANQMENHDSVCPFKIIPCEQNCSESIMRRDMDRHCITVCPMKL 248
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFD 312
NCPF++VGC S + QC +QQH D++ SHL+YIL+ ++++ L LK R E++++
Sbjct: 249 VNCPFHSVGCLSDVHQCEVQQHHLDNVSSHLMYILRSIYKEASLDDLKPRAEQIQQ-LST 307
Query: 313 KLAEAPDVRSLSFAIKDLEAKLGPF--KEDTVNRYSGEGKVNEEKKI---NEVKPDGEGT 367
+L+EA + RSL+ +K+++ KLGP K V + N EKK E+K E +
Sbjct: 308 RLSEARNARSLTNLVKEIDGKLGPLEIKPKIVTDSESDKPENTEKKALEEAEIKEKPETS 367
Query: 368 INGEVNISEEGKINATDKVNEKE 390
V + + + DK+ KE
Sbjct: 368 NLKAVTLEQTAREAPEDKLVSKE 390
>gi|449453888|ref|XP_004144688.1| PREDICTED: uncharacterized protein LOC101209212 [Cucumis sativus]
Length = 629
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/385 (56%), Positives = 287/385 (74%), Gaps = 9/385 (2%)
Query: 1 MDVTSSGAEVVPEKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFR 60
+D+ ++ E++PEKIED++ HC L D EIVHK+AQ LPGL++ACVDNT+GDIFR
Sbjct: 8 VDLPTTDKEIIPEKIEDEEIKEPFIHCELCDAEIVHKLAQVLLPGLSTACVDNTSGDIFR 67
Query: 61 TPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN 120
TPGSVA IR EMV+YLT RSET VAESVIL++P +AEVSDHPYDIISDFVD+F+ +KRN
Sbjct: 68 TPGSVAADIRKEMVDYLTMRSETCVAESVILDNPSEAEVSDHPYDIISDFVDDFSATKRN 127
Query: 121 LFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFN 180
LFSRVSGW+ SEKRED+IDDF+QEM+++GFW ++RREAIA LLKNVDFK+EFHC+ KF+
Sbjct: 128 LFSRVSGWILSEKREDKIDDFVQEMDVNGFWPLDRREAIAQTLLKNVDFKSEFHCDKKFH 187
Query: 181 SEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDM 240
S +EL H+ +CGF S+ C NEGC A+F A H E+HDS+CPFKII CEQKC +MRR+M
Sbjct: 188 SVEELAGHVENCGFRSLTCTNEGCTARFCASHAEQHDSICPFKIILCEQKCSAFIMRREM 247
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
DRHCITVC MKL NCPF+ +GCQS +P C+I QH + SHLL+IL +H++ + L
Sbjct: 248 DRHCITVCPMKLVNCPFHNLGCQSPVPYCLIAQHCSESFDSHLLHILHSVHKEANEETLI 307
Query: 301 NRVEELEK-SYFDKLAEAPDVRSLSFAIKDLEAKLGPF-----KEDTVNRYSGEGKVNEE 354
+R ++LE+ S D L ++R L+ IK+++++LGP EDT K +EE
Sbjct: 308 HRQQQLEEASSLDHLRGLQNLRLLTSKIKEMDSQLGPLVVICRVEDTEEAKDDSDKSDEE 367
Query: 355 KKINEVKPDGEGTINGEVNISEEGK 379
K+ ++V E T + N+++E K
Sbjct: 368 KEASKV---TENTKDAASNVTQETK 389
>gi|297833986|ref|XP_002884875.1| hypothetical protein ARALYDRAFT_341316 [Arabidopsis lyrata subsp.
lyrata]
gi|297330715|gb|EFH61134.1| hypothetical protein ARALYDRAFT_341316 [Arabidopsis lyrata subsp.
lyrata]
Length = 564
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/424 (53%), Positives = 292/424 (68%), Gaps = 15/424 (3%)
Query: 13 EKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTE 72
E IED+K+GG +FHC+L DT++VHKIAQ FLPGLA+ACVDNTTGDIFR+PGSVA IR E
Sbjct: 9 ESIEDQKEGGPSFHCDLYDTQVVHKIAQVFLPGLATACVDNTTGDIFRSPGSVAADIRKE 68
Query: 73 MVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSE 132
M+EYLT+RSE+FVAE ++L+ + E S P+DIISDF+D+FA SKRNLFSRVSGWM SE
Sbjct: 69 MIEYLTRRSESFVAEHIVLQGGSEIEASHDPFDIISDFIDDFATSKRNLFSRVSGWMLSE 128
Query: 133 KREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHC 192
+RED IDDF QEMEISGFW + RE IA LLKNVDFK+ HC MKF +E EL EH + C
Sbjct: 129 RREDNIDDFAQEMEISGFWLTDHREGIAQTLLKNVDFKSSAHCEMKFQTEGELAEHTMSC 188
Query: 193 GFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKL 252
G+ +M C NEGC A F A +E HDSVCPFK IPCEQ C +++MRRDMDRHCITVC MKL
Sbjct: 189 GYRTMNCENEGCTAVFCANQMENHDSVCPFKNIPCEQNCSESIMRRDMDRHCITVCPMKL 248
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFD 312
NCPF+AVGC S + QC +QQH D++ SHL+YIL+ ++++ LK R E++++
Sbjct: 249 VNCPFHAVGCLSDVHQCEVQQHHLDNVSSHLMYILRSIYKEASPDDLKPRAEQIQQ-LST 307
Query: 313 KLAEAPDVRSLSFAIKDLEAKLGPF--KEDTVNRYSGEGKVNEEKKINEVKPDGEGTING 370
+L+EA + RSL+ +K+++ KLGP K V + N EK+ E + E N
Sbjct: 308 RLSEARNARSLTNLVKEIDGKLGPLEIKPKIVTNSESDKPENTEKEALE---EAEIKENP 364
Query: 371 EVNISEEGKINAT--DKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGR 428
E + + G + T DKV KE N + E K K S+ ++ E EG+ +
Sbjct: 365 ETSNLKAGTLEQTAEDKVVSKE--VNDAMVEEAAK-----KVSEAEIAENVNEEGELKAQ 417
Query: 429 KVSE 432
K+ E
Sbjct: 418 KLLE 421
>gi|449517279|ref|XP_004165673.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101230210 [Cucumis sativus]
Length = 459
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/416 (54%), Positives = 300/416 (72%), Gaps = 20/416 (4%)
Query: 1 MDVTSSGAEVVPEKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFR 60
+D+ ++ E++PEKIED++ HC L D EIVHK+AQ LPGL++ACVDNT+GDIFR
Sbjct: 8 VDLPTTDKEIIPEKIEDEEIKEPFIHCELCDAEIVHKLAQVLLPGLSTACVDNTSGDIFR 67
Query: 61 TPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN 120
TPGSVA IR EMV+YLT RSET VAESVIL++P +AEVSDHPYDIISDFVD+F+ +KRN
Sbjct: 68 TPGSVAADIRKEMVDYLTMRSETCVAESVILDNPSEAEVSDHPYDIISDFVDDFSATKRN 127
Query: 121 LFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFN 180
LFSRVSGW+ SEKRED+IDDF+QEM+++GFW ++RREAIA LLKNVDFK+EFHC+ KF+
Sbjct: 128 LFSRVSGWILSEKREDKIDDFVQEMDVNGFWPLDRREAIAQTLLKNVDFKSEFHCDKKFH 187
Query: 181 SEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDM 240
S +EL H+ +CGF S+ C NEGC A+F A H E+HDS+CPFKII CEQKC +MRR+M
Sbjct: 188 SVEELAGHVENCGFRSLTCTNEGCTARFCASHAEQHDSICPFKIILCEQKCSAFIMRREM 247
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
DRHCITVC MKL NCPF+ +GCQS +P C+I QH + SHLL+IL +H++ + L
Sbjct: 248 DRHCITVCPMKLVNCPFHNLGCQSPVPYCLIAQHCSESFDSHLLHILHSVHKEANEETLI 307
Query: 301 NRVEELEK-SYFDKLAEAPDVRSLSFAIKDLEAKLGPF-----KEDTVNRYSGEGKVNEE 354
+R ++LE+ S D L ++R L+ IK+++++LGP EDT K +EE
Sbjct: 308 HRQQQLEEASSLDHLRGLQNLRLLTSKIKEMDSQLGPLVVICRVEDTEEAKDDSDKSDEE 367
Query: 355 KKINEVKPDGEGTINGEVNISEEGKINATDKVNEKEKISNKS-KPNEGGKGNEQEK 409
K+ ++V E T + N+++E KE++ N S + +G NE+E+
Sbjct: 368 KEASKV---TENTKDAASNVTQET----------KEEMPNGSEETKDGSIANEEER 410
>gi|356500393|ref|XP_003519016.1| PREDICTED: uncharacterized protein LOC100802183 [Glycine max]
Length = 416
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/364 (56%), Positives = 270/364 (74%), Gaps = 3/364 (0%)
Query: 1 MDVTSSGAEVVPEKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFR 60
M++ ++ ++ P+KIE +K+ G FHC+ DTE+VHK+AQ FLPGLA ACVDNTTG F+
Sbjct: 7 MELPTTDVDLEPKKIEPEKNEGPLFHCDFCDTEVVHKLAQMFLPGLACACVDNTTGGPFK 66
Query: 61 TPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN 120
TPGSVAV +R EM+E++T++SE+FVAESVILE +HP+DII FVDEF SKRN
Sbjct: 67 TPGSVAVDLRKEMIEFVTQKSESFVAESVILEGGPDGGALEHPFDIICYFVDEFVSSKRN 126
Query: 121 LFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFN 180
L S+VSGW+ S+KRED+IDDF+QEME++GFW ++RRE +A L+KNVD K+ FHC+M F
Sbjct: 127 LLSQVSGWLLSDKREDKIDDFVQEMEMNGFWPLDRRETLAKTLIKNVDVKSSFHCSMSFK 186
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H C F +IC NEGC+A+FSAGHL++HDS C FKI+PCEQKC D+++RR+
Sbjct: 187 SARDLANHADDGCNFRPVICRNEGCDARFSAGHLKEHDSACDFKIVPCEQKCTDSILRRE 246
Query: 240 MDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVL 299
MDRHCITVC MKL NCPFYAVGC+S I Q MI++H DD+ SHLL +L+ +H++ + L
Sbjct: 247 MDRHCITVCPMKLVNCPFYAVGCRSAIAQSMIRKHCSDDIESHLLLMLKGIHQEASGEDL 306
Query: 300 KNRVEE-LEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEGKV-NEEKKI 357
K RVE+ L+ S KLAEA DVRS +KDLE KLGP + + S E NE+ +
Sbjct: 307 KRRVEQILQASSRSKLAEARDVRSYKNIVKDLEVKLGPLEVIAKEKTSAETVAENEDSED 366
Query: 358 NEVK 361
N K
Sbjct: 367 NRTK 370
>gi|40850580|gb|AAR96011.1| hypothetical protein [Musa acuminata]
Length = 1382
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/353 (55%), Positives = 246/353 (69%), Gaps = 12/353 (3%)
Query: 23 LTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSE 82
L FHCN D E+V KIAQ LPGLA+ACVDNTTG +F++ SVAV R EMV+YL +RS+
Sbjct: 16 LLFHCNQCDRELVRKIAQLLLPGLATACVDNTTG-LFKSAASVAVVTRKEMVDYLKQRSQ 74
Query: 83 TFVAESVILEDP---DQAEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRID 139
+V E+V D E SD P +IIS FVD+FA SKRNLFSRVSGW+SSE RED+ID
Sbjct: 75 MYVTEAVGQGDDIVNMVEEFSDEPTEIISGFVDDFASSKRNLFSRVSGWLSSESREDKID 134
Query: 140 DFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMIC 199
DF+QEME + FWSI+RREAIA IL++NVD K FHC+ KF+S ++L EH C F + C
Sbjct: 135 DFVQEMETNVFWSIDRREAIAEILIRNVDLKRAFHCSKKFDSAQQLAEHETQCSFRILGC 194
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYA 259
NEGC AKFSA H EKHDS CPFK+IPCEQKC + ++R DMDRHCIT+C MKL NCPFY
Sbjct: 195 TNEGCKAKFSAIHAEKHDSECPFKVIPCEQKCSERIVRHDMDRHCITICPMKLVNCPFYQ 254
Query: 260 VGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKSY-FDKLAEA 317
VGC S P C +++H + L SHLLY+LQ LH+ + ++ L+ RV+ LEKS+ +L+EA
Sbjct: 255 VGCHSAFPLCNLEKHCSECLRSHLLYVLQVLHKQEASVEELRRRVQLLEKSHTLSELSEA 314
Query: 318 PDVRSLSFAIKDLEAKLGPFKED------TVNRYSGEGKVNEEKKINEVKPDG 364
DVRSL+ IK+ EAK+ + D ++ V+ +K PDG
Sbjct: 315 LDVRSLTLVIKEQEAKMKKLERDLKLFVSVAPSFAAAFPVDYDKSSERKVPDG 367
>gi|357160517|ref|XP_003578790.1| PREDICTED: uncharacterized protein LOC100836090 [Brachypodium
distachyon]
Length = 353
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/327 (49%), Positives = 221/327 (67%), Gaps = 17/327 (5%)
Query: 19 KDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLT 78
KD GL C D+E +HK+AQ LPGLA+ CVD TTGD+FR P VAV +R EMV+Y+T
Sbjct: 33 KDEGL-LQCPYCDSEAMHKLAQFLLPGLAAVCVDGTTGDLFRKPSVVAVDLRKEMVDYMT 91
Query: 79 KRSETFVAESVILEDPDQ---AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKRE 135
+RSETF+A+++I + Q +E+ + PY+IIS F+D+F+ SKRN+ VSGW+ S+ R+
Sbjct: 92 QRSETFIADALIESEASQGADSEMPEDPYEIISIFMDDFSSSKRNIIGHVSGWLLSDSRD 151
Query: 136 DRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFI 195
D+IDDF+QEME++ FW + RRE IA +LLKNVD K +FHC K+ +E+ L H C F
Sbjct: 152 DKIDDFVQEMEMTKFWPLERREVIAEVLLKNVDLKTKFHCPEKYENEERLANHKAQCSFR 211
Query: 196 SMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANC 255
+ CPN+GC A S ++ HDS C FKI+ CEQ C L+RRDMDRHC+TVC M+ C
Sbjct: 212 PVTCPNDGCRATVSVRCMQDHDSACLFKILQCEQHCEKHLLRRDMDRHCVTVCDMRPMKC 271
Query: 256 PFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHR-----DKPLKVLKNRVEELEKS- 309
PF GC S+ P+ +Q+H + L HLL +LQ +H+ D+ LK+R +LEKS
Sbjct: 272 PF---GCDSSFPERNLQEHCSEFLQLHLLKVLQGIHKKGFTDDE----LKDRAIQLEKSD 324
Query: 310 YFDKLAEAPDVRSLSFAIKDLEAKLGP 336
KLA+A D RSL+ +KDLE K+ P
Sbjct: 325 DHGKLAKAQDARSLTNIVKDLEVKMKP 351
>gi|125535991|gb|EAY82479.1| hypothetical protein OsI_37696 [Oryza sativa Indica Group]
Length = 335
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 216/318 (67%), Gaps = 8/318 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ C+D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GLLLQCPYCDSEAMHKLAQLLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 74
Query: 82 ETFVAESVILEDPDQ---AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ + P++++S F+D+F+ +KRN+ VSGW+ S+ RED+I
Sbjct: 75 ETFISDSLIESEASQDEEKEMPEDPFEVVSIFMDDFSSTKRNIIGHVSGWLMSDNREDKI 134
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DDF+QEME++ FW + RREAIA +LLKNVD K ++HC K+ +E+ L +H C F +
Sbjct: 135 DDFVQEMEMTRFWPLERREAIAEVLLKNVDLKTKYHCPEKYENEQRLADHRAQCSFRPVT 194
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CPN+GC AK S + HDS C FKI+ CEQ C LMRRDMDRHC+TVC MK CPF
Sbjct: 195 CPNDGCRAKVSVRCMTDHDSACLFKILTCEQSCEKRLMRRDMDRHCVTVCPMKPMKCPF- 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAE 316
GC S+ P+ ++QH + L HLL +L+ +H+ + K+ LEK D KL +
Sbjct: 254 --GCDSSFPERNLEQHCSEFLQPHLLKVLKAIHKKGFTDEGFKDHALLLEKQDIDGKLGK 311
Query: 317 APDVRSLSFAIKDLEAKL 334
+ +VRSL+ +K+LEAK+
Sbjct: 312 SREVRSLTNVVKNLEAKM 329
>gi|242069809|ref|XP_002450181.1| hypothetical protein SORBIDRAFT_05g001630 [Sorghum bicolor]
gi|241936024|gb|EES09169.1| hypothetical protein SORBIDRAFT_05g001630 [Sorghum bicolor]
Length = 331
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 219/318 (68%), Gaps = 8/318 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
G C D+E +HK+AQ LPGLA+ CVD TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GPLIQCPYCDSEAMHKLAQILLPGLAAVCVDGTTGDLFRNPSVVAVDLRKEMVDYITQRS 74
Query: 82 ETFVAESVILEDPDQ----AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDR 137
+TF+A+++I + +Q AE+ D P++IIS F+D+F+ +KRN+ VSGW+ S+ R+D+
Sbjct: 75 DTFIADALIESEANQDGPEAEMPDDPFEIISIFMDDFSSTKRNIIGHVSGWLLSDSRDDK 134
Query: 138 IDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISM 197
IDDF+QEME++ FW + RREAIA +LLKNVD K +FHC K+ +E+ L +H C F +
Sbjct: 135 IDDFVQEMEMTKFWPLERREAIAEVLLKNVDLKTKFHCPEKYENEERLADHKEQCSFRPV 194
Query: 198 ICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
+CPN+GC AK S ++ HD+ C +K++ CEQ C L+RRDMDRHC+TVC M+ CPF
Sbjct: 195 VCPNDGCRAKVSVRCMKDHDAACLYKVLQCEQGCEKKLLRRDMDRHCVTVCPMRPMKCPF 254
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFD-KLAE 316
GC S+ +++H + L HL+ +L+ +H+ + + LK ++LEK D KLA+
Sbjct: 255 ---GCDSSFADRDLEKHCAEFLQDHLVKVLKAIHKKRSEEELKEIAQKLEKFDADGKLAK 311
Query: 317 APDVRSLSFAIKDLEAKL 334
A D R L+ +KDLEAK+
Sbjct: 312 ALDARPLTNLVKDLEAKM 329
>gi|125535990|gb|EAY82478.1| hypothetical protein OsI_37695 [Oryza sativa Indica Group]
Length = 335
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 217/318 (68%), Gaps = 8/318 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ C+D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GLLLQCPYCDSEAMHKLAQLLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 74
Query: 82 ETFVAESVILEDPDQ---AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ + P++++S F+D+F+ +KRN+ VSGW+ ++ RED+I
Sbjct: 75 ETFISDSLIESEASQDEEKEMPEDPFEVVSIFMDDFSSTKRNIIGHVSGWLMNDSREDKI 134
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DDF+QEME++ FW + RREAIA +LLKNVD K ++HC K+ +E+ L +H C F +
Sbjct: 135 DDFVQEMEMTRFWPLERREAIAEVLLKNVDLKTKYHCPEKYENEQRLADHKAQCSFRPVT 194
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CPN+GC AK S + HDS C FKI+ CEQ C LMRRDMDRHC+TVC M+ CPF
Sbjct: 195 CPNDGCRAKVSVRCMTDHDSACLFKILTCEQSCEKRLMRRDMDRHCVTVCPMRPMKCPF- 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAE 316
GC S+ P+ ++QH + L +HLL +L+ +H+ + K+ LEK D KL +
Sbjct: 254 --GCDSSFPERNLEQHCSEFLQAHLLKVLKAIHKKGFTDEGFKDHALLLEKQDIDGKLGK 311
Query: 317 APDVRSLSFAIKDLEAKL 334
+ +VRSL+ +K+LEAK+
Sbjct: 312 SREVRSLTNVVKNLEAKM 329
>gi|77553153|gb|ABA95949.1| TRAF-type zinc finger family protein [Oryza sativa Japonica Group]
Length = 364
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 215/318 (67%), Gaps = 8/318 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ +D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 44 GLLLQCPYCDSEAMHKLAQLLLPGLAAVSIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 103
Query: 82 ETFVAESVILEDPDQ---AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ + P++++S F+D+F+ +KRN+ VSGW+ S+ RED+I
Sbjct: 104 ETFISDSLIESEASQDEEKEMPEDPFEVVSIFMDDFSSTKRNIIGHVSGWLMSDNREDKI 163
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DDF+QEME++ FW + RREAIA +LLKNVD K ++HC K+ +E+ L +H C F +
Sbjct: 164 DDFVQEMEMTRFWPLERREAIAEVLLKNVDLKTKYHCPEKYENEQRLADHKAQCSFRPVT 223
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CPN+GC AK S + HDS C FKI+ CEQ C LMRRDMDRHC+TVC M+ CPF
Sbjct: 224 CPNDGCRAKVSVRCMTDHDSACLFKILTCEQSCEKRLMRRDMDRHCVTVCPMRPMKCPF- 282
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAE 316
GC S+ P+ ++QH + L HLL +L+ +H+ + K+ LEK D KL +
Sbjct: 283 --GCDSSFPERNLEQHCSEFLQPHLLKVLKAIHKKGFTDEGFKDHALLLEKQDIDGKLGK 340
Query: 317 APDVRSLSFAIKDLEAKL 334
+ +VRSL+ +K+LEAK+
Sbjct: 341 SREVRSLTNVVKNLEAKM 358
>gi|125551750|gb|EAY97459.1| hypothetical protein OsI_19388 [Oryza sativa Indica Group]
Length = 334
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 218/318 (68%), Gaps = 8/318 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ C+D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GLLLQCPYCDSEAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 74
Query: 82 ETFVAESVILEDPDQA---EVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ + P++I+S F+D+F+ +KRN+ VSGW+ S+ RED+I
Sbjct: 75 ETFISDSLIESEASQDQENEMPEDPFEIVSIFMDDFSSTKRNIIGHVSGWLMSDSREDKI 134
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DDF+QEME++ FW + RRE IA +LLKNVD K ++HC K+ +E+ L +H C F +
Sbjct: 135 DDFVQEMEMTRFWPLERREVIAEVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVT 194
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CPN+GC AK S ++ HDS C FKI+ CEQ C L+RRDMDRHC+TVC M+ CPF
Sbjct: 195 CPNDGCRAKVSVRCMQDHDSACLFKILTCEQNCEKRLLRRDMDRHCVTVCPMRPMKCPF- 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAE 316
GC S+ P+ ++QH + L +HL +L+ +H+ + LK+ LEK D KLA+
Sbjct: 254 --GCDSSFPERNLEQHCSEFLQAHLHKLLKAIHKKGFTDEGLKDHALLLEKHDNDGKLAK 311
Query: 317 APDVRSLSFAIKDLEAKL 334
+ DVRSL+ +K+LEAK+
Sbjct: 312 SRDVRSLTNVVKNLEAKI 329
>gi|297612782|ref|NP_001066315.2| Os12g0181300 [Oryza sativa Japonica Group]
gi|255670108|dbj|BAF29334.2| Os12g0181300 [Oryza sativa Japonica Group]
Length = 335
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 215/318 (67%), Gaps = 8/318 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ +D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GLLLQCPYCDSEAMHKLAQLLLPGLAAVSIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 74
Query: 82 ETFVAESVILEDPDQ---AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ + P++++S F+D+F+ +KRN+ VSGW+ S+ RED+I
Sbjct: 75 ETFISDSLIESEASQDEEKEMPEDPFEVVSIFMDDFSSTKRNIIGHVSGWLMSDNREDKI 134
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DDF+QEME++ FW + RREAIA +LLKNVD K ++HC K+ +E+ L +H C F +
Sbjct: 135 DDFVQEMEMTRFWPLERREAIAEVLLKNVDLKTKYHCPEKYENEQRLADHKAQCSFRPVT 194
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CPN+GC AK S + HDS C FKI+ CEQ C LMRRDMDRHC+TVC M+ CPF
Sbjct: 195 CPNDGCRAKVSVRCMTDHDSACLFKILTCEQSCEKRLMRRDMDRHCVTVCPMRPMKCPF- 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAE 316
GC S+ P+ ++QH + L HLL +L+ +H+ + K+ LEK D KL +
Sbjct: 254 --GCDSSFPERNLEQHCSEFLQPHLLKVLKAIHKKGFTDEGFKDHALLLEKQDIDGKLGK 311
Query: 317 APDVRSLSFAIKDLEAKL 334
+ +VRSL+ +K+LEAK+
Sbjct: 312 SREVRSLTNVVKNLEAKM 329
>gi|297723943|ref|NP_001174335.1| Os05g0305200 [Oryza sativa Japonica Group]
gi|215768799|dbj|BAH01028.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631043|gb|EEE63175.1| hypothetical protein OsJ_17984 [Oryza sativa Japonica Group]
gi|255676225|dbj|BAH93063.1| Os05g0305200 [Oryza sativa Japonica Group]
Length = 334
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 218/318 (68%), Gaps = 8/318 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ C+D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GLLLQCPYCDSEAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 74
Query: 82 ETFVAESVILEDPDQA---EVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ + P++I+S F+D+F+ +KRN+ VSGW+ S+ RED+I
Sbjct: 75 ETFISDSLIESEASQDQENEMPEDPFEIVSIFMDDFSSTKRNIIGHVSGWLMSDSREDKI 134
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DDF+QEME++ FW + RRE IA +LLKNVD K ++HC K+ +E+ L +H C F +
Sbjct: 135 DDFVQEMEMTRFWPLERREIIAEVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVT 194
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CPN+GC AK S ++ HDS C FKI+ CEQ C L+RRDMDRHC+TVC M+ CPF
Sbjct: 195 CPNDGCRAKVSVRCMQDHDSACLFKILTCEQNCEKRLLRRDMDRHCVTVCPMRPMKCPF- 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAE 316
GC S+ P+ ++QH + L +HL +L+ +H+ + LK+ LEK D KLA+
Sbjct: 254 --GCDSSFPERNLEQHCSEFLQAHLHKLLKAIHKKGFTDEGLKDHALLLEKHDNDGKLAK 311
Query: 317 APDVRSLSFAIKDLEAKL 334
+ DVRSL+ +K+LEAK+
Sbjct: 312 SRDVRSLTNVVKNLEAKI 329
>gi|413924743|gb|AFW64675.1| hypothetical protein ZEAMMB73_624493 [Zea mays]
Length = 337
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/321 (46%), Positives = 218/321 (67%), Gaps = 13/321 (4%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
G C D+E +HK+AQ LPGLA+ CVD TTGD FR+P +VAV +R EMV+Y+T+RS
Sbjct: 16 GALIQCPYCDSEAMHKLAQILLPGLAAVCVDGTTGDPFRSPSAVAVDLRKEMVDYITQRS 75
Query: 82 ETFVAESVILEDPDQ----AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDR 137
++F+A+++I + +Q AEV D P++ +S F+D+FA +KRN+ VSGW+ ++ R+D+
Sbjct: 76 DSFIADALIESEANQDAPGAEVPDDPFETVSVFMDDFASTKRNIIGHVSGWLLTDSRDDK 135
Query: 138 IDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISM 197
IDDF+QEME + FW + RREA+A +LLKNVD K FHC K+ +E+ L +H C F +
Sbjct: 136 IDDFVQEMEATKFWPLERREAVAELLLKNVDLKTRFHCPEKYENEERLEDHKAQCSFRPV 195
Query: 198 ICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
C N+GC AK S ++ HD+ C +K++ CEQ C L+RRDMDRHC+TVC M+ CPF
Sbjct: 196 ACANDGCRAKVSVRCVKDHDAACVYKLLQCEQGCDKRLLRRDMDRHCVTVCPMRPMKCPF 255
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRD-KPLKVLKNRVEELEKSYFD---K 313
GC S+ P +++H + L HLL +L+ +H+ + + LK+ ++LEK FD K
Sbjct: 256 ---GCDSSFPDRDLERHCAEFLQPHLLMVLKAIHKKGRSEQDLKDLAQKLEK--FDGDGK 310
Query: 314 LAEAPDVRSLSFAIKDLEAKL 334
LA+A D R L+ +KDLEAK+
Sbjct: 311 LAKALDARPLTNVVKDLEAKM 331
>gi|212720644|ref|NP_001132607.1| uncharacterized protein LOC100194079 [Zea mays]
gi|194694878|gb|ACF81523.1| unknown [Zea mays]
Length = 337
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/321 (46%), Positives = 218/321 (67%), Gaps = 13/321 (4%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
G C D+E +HK+AQ LPGLA+ CVD TTGD FR+P +VAV +R EMV+Y+T+RS
Sbjct: 16 GALIQCPYCDSEAMHKLAQILLPGLAAVCVDGTTGDPFRSPSAVAVDLRKEMVDYITQRS 75
Query: 82 ETFVAESVILEDPDQ----AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDR 137
++F+A+++I + +Q AEV D P++ +S F+D+FA +KRN+ VSGW+ ++ R+D+
Sbjct: 76 DSFIADALIESEANQDAPGAEVPDDPFETVSVFMDDFASTKRNIIGHVSGWLLTDSRDDK 135
Query: 138 IDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISM 197
IDDF+QEME + FW + RREA+A +LLKNVD K FHC K+ +E+ L +H C F +
Sbjct: 136 IDDFVQEMEATKFWPLERREAVAELLLKNVDLKTRFHCPEKYENEERLEDHKAQCSFRPV 195
Query: 198 ICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
C N+GC AK S ++ HD+ C +K++ CEQ C L+RRDMDRHC+TVC M+ CPF
Sbjct: 196 ACANDGCRAKVSVRCVKDHDAACVYKLLQCEQGCDKRLLRRDMDRHCVTVCPMRPMKCPF 255
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRD-KPLKVLKNRVEELEKSYFD---K 313
GC S+ P +++H + L HLL +L+ +H+ + + LK+ ++LEK FD K
Sbjct: 256 ---GCDSSFPDRDLERHCAEFLQPHLLMVLKAIHKKGRSEQDLKDLAQKLEK--FDGDGK 310
Query: 314 LAEAPDVRSLSFAIKDLEAKL 334
LA+A D R L+ +KDLEAK+
Sbjct: 311 LAKALDARPLTNIVKDLEAKM 331
>gi|125589452|gb|EAZ29802.1| hypothetical protein OsJ_13858 [Oryza sativa Japonica Group]
Length = 334
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 217/318 (68%), Gaps = 8/318 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ C+D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GLLLQCPYCDSEAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 74
Query: 82 ETFVAESVILEDPDQA---EVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ P++I+S F+D+F+ +KRN+ VSGW+ S+ RED+I
Sbjct: 75 ETFISDSLIESEASQDQENEMPVDPFEIVSIFMDDFSSTKRNIIGHVSGWLMSDSREDKI 134
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DDF+QEME++ FW + RRE IA +LLKNVD K ++HC K+ +E+ L +H C F +
Sbjct: 135 DDFVQEMEMTRFWPLERREVIAEVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVT 194
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CPN+GC AK S ++ HDS C FKI+ CEQ C L+RRDMDRHC+TVC M+ CPF
Sbjct: 195 CPNDGCRAKVSVRCMQDHDSACLFKILTCEQNCEKRLLRRDMDRHCVTVCPMRPMKCPF- 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAE 316
GC S+ P+ ++QH + L +HL +L+ +H+ + LK+ LEK D KLA+
Sbjct: 254 --GCDSSFPERNLEQHCSEFLQAHLHKLLKVIHKKGFTDEGLKDHALLLEKHDNDGKLAK 311
Query: 317 APDVRSLSFAIKDLEAKL 334
+ DVRSL+ +K+LEAK+
Sbjct: 312 SRDVRSLTNVVKNLEAKI 329
>gi|115457324|ref|NP_001052262.1| Os04g0218900 [Oryza sativa Japonica Group]
gi|21741757|emb|CAD39783.1| OSJNBa0060B20.16 [Oryza sativa Japonica Group]
gi|113563833|dbj|BAF14176.1| Os04g0218900 [Oryza sativa Japonica Group]
gi|215678625|dbj|BAG92280.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 334
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/318 (47%), Positives = 217/318 (68%), Gaps = 8/318 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ C+D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GLLLQCPYCDSEAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 74
Query: 82 ETFVAESVILEDPDQA---EVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ + P++I+S F+D+F+ +KRN+ VSGW+ S+ RED+I
Sbjct: 75 ETFISDSLIESEASQDQENEMPEDPFEIVSIFMDDFSSTKRNIIGHVSGWLMSDSREDKI 134
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DDF+QEME++ FW + RRE IA +LLKNVD K ++HC K+ +E+ L +H C F +
Sbjct: 135 DDFVQEMEMTRFWPLERREVIAEVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVT 194
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CPN+GC AK S ++ HDS C FKI+ CEQ C L+R DMDRHC+TVC M+ CPF
Sbjct: 195 CPNDGCRAKVSVRCMQDHDSACLFKILTCEQNCEKRLLRHDMDRHCVTVCPMRPMKCPF- 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAE 316
GC S+ P+ ++QH + L +HL +L+ +H+ + LK+ LEK D KLA+
Sbjct: 254 --GCDSSFPERNLEQHCSEFLQAHLHKLLKAIHKKGFTDEGLKDHALLLEKHDNDGKLAK 311
Query: 317 APDVRSLSFAIKDLEAKL 334
+ DVRSL+ +K+LEAK+
Sbjct: 312 SRDVRSLTNVVKNLEAKI 329
>gi|125540211|gb|EAY86606.1| hypothetical protein OsI_07987 [Oryza sativa Indica Group]
Length = 355
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/324 (47%), Positives = 219/324 (67%), Gaps = 5/324 (1%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL F CNL D+++VH +A+ L GLA+A VD+TTGDIF++P SVAVG+++E+ EYL +RS
Sbjct: 12 GLNFQCNLCDSDVVHSMAEILLRGLATASVDSTTGDIFKSPSSVAVGMKSELAEYLIQRS 71
Query: 82 ETFVAESVIL-EDPDQAEV--SDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
T V E+V ED + + S P + +SD +D F SKRNL S VSG++SSE R ++I
Sbjct: 72 MTLVREAVDGGEDHSEQLIKASTMPTEFLSDLIDGFVASKRNLLSHVSGFLSSETRLNKI 131
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DF+Q++E+ FW+ + REA A +LK++D K HC +F+++ L EH C F +
Sbjct: 132 KDFIQKLEMENFWAPDVREATAGTILKSIDMKCIIHCPERFDTQDNLAEHRNLCRFRIVN 191
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
C N+GC A FSA H+EKHDSVCPFK++PCEQ C +MR +MDRHC +VC MKL NCPFY
Sbjct: 192 CKNDGCLASFSANHIEKHDSVCPFKVLPCEQLCEQHVMRCEMDRHCASVCPMKLINCPFY 251
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKSY-FDKLAE 316
VGC+S PQC++ +H + L HL+YIL+ R D + + R+ LEK+ ++L+
Sbjct: 252 QVGCESAFPQCVLDKHCSERLQIHLMYILELTTRHDAFVNDMNQRLHLLEKAQSLNELSG 311
Query: 317 APDVRSLSFAIKDLEAKLGPFKED 340
A D R+L+ K+ EAK+ ++D
Sbjct: 312 ALDNRTLTLTAKEQEAKIKKLEQD 335
>gi|115447183|ref|NP_001047371.1| Os02g0605500 [Oryza sativa Japonica Group]
gi|47497283|dbj|BAD19326.1| UbiA prenyltransferase-like protein [Oryza sativa Japonica Group]
gi|113536902|dbj|BAF09285.1| Os02g0605500 [Oryza sativa Japonica Group]
gi|125582809|gb|EAZ23740.1| hypothetical protein OsJ_07445 [Oryza sativa Japonica Group]
Length = 355
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/324 (47%), Positives = 219/324 (67%), Gaps = 5/324 (1%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL F CNL D+++VH +A+ L GLA+A VD+TTGDIF++P SVAVG+++E+ EYL + S
Sbjct: 12 GLNFQCNLCDSDVVHSMAEILLRGLATASVDSTTGDIFKSPSSVAVGMKSELAEYLIQGS 71
Query: 82 ETFVAESVIL-EDPDQAEV--SDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
T V E+V ED + + S P + +SD +D F SKRNL S VSG++SSE R ++I
Sbjct: 72 MTLVREAVDGGEDHSEQLIKASTMPTEFLSDLIDGFVASKRNLLSHVSGFLSSETRLNKI 131
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DF+Q++E+ FW+ + REA A +LK++D K HC +F+++ +L EH C F +
Sbjct: 132 KDFIQKLEMENFWAPDVREATAGTILKSIDMKCIIHCPERFDTQDKLAEHRNLCRFRIVN 191
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
C N+GC A FSA H+EKHDSVCPFK++PCEQ C +MR +MDRHC +VC MKL NCPFY
Sbjct: 192 CKNDGCLASFSANHIEKHDSVCPFKVLPCEQLCEQHVMRCEMDRHCASVCPMKLINCPFY 251
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKSY-FDKLAE 316
VGC+S PQC++ +H + L HL+YIL+ R D + + R+ LEK+ ++L+
Sbjct: 252 QVGCESAFPQCVLDKHCSERLQIHLMYILELTTRHDAFVNDMNQRLHLLEKAQSLNELSG 311
Query: 317 APDVRSLSFAIKDLEAKLGPFKED 340
A D R+L+ K+ EAK+ ++D
Sbjct: 312 ALDNRTLTLTAKEQEAKIKKLEQD 335
>gi|226491704|ref|NP_001152220.1| prenyltransferase/ zinc ion binding protein [Zea mays]
gi|223945045|gb|ACN26606.1| unknown [Zea mays]
gi|414588718|tpg|DAA39289.1| TPA: prenyltransferase/ zinc ion binding protein [Zea mays]
Length = 425
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 148/319 (46%), Positives = 207/319 (64%), Gaps = 9/319 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
G C D+E +HK+AQ LPGLA+ CVD TTGD F +P VAV +R EMV+Y+T+RS
Sbjct: 98 GPLIQCPYCDSEAMHKLAQILLPGLAAVCVDGTTGDPFHSPSVVAVDLRREMVDYITQRS 157
Query: 82 ETFVAESVILEDPDQ----AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDR 137
E+F+A+++I + +Q A V D P++ +S F+D+F +KRN+ VSGW+ S+ R+D+
Sbjct: 158 ESFIADALIESEANQEGPDAAVPDDPFEAVSVFMDDFGSTKRNIIGHVSGWLLSDSRDDK 217
Query: 138 IDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISM 197
IDD +QEME + FW + RREA+A LLKNVD + FHC K+ SE L +H C F +
Sbjct: 218 IDDLVQEMEATRFWPLERREAVAETLLKNVDLRTRFHCPEKYESEARLADHKQQCSFRPV 277
Query: 198 ICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
CPN+GC A+ S HD+ CP+K + CEQ C L+RRDMDRHC+TVC M+ CPF
Sbjct: 278 ACPNDGCRARVSVRCARDHDAACPYKPLQCEQGCEKRLLRRDMDRHCVTVCPMRPMKCPF 337
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRD-KPLKVLKNRVEELEKSYFD-KLA 315
GC S+ P +++H L HL+ +L+ +H+ + LK+ +LEK D KLA
Sbjct: 338 ---GCDSSFPDRDLEKHCAQFLRPHLIKVLKAIHKKARSEDELKDLALKLEKYDGDGKLA 394
Query: 316 EAPDVRSLSFAIKDLEAKL 334
+A D R L+ A+KDLEAK+
Sbjct: 395 KALDARPLTNAVKDLEAKM 413
>gi|194697830|gb|ACF82999.1| unknown [Zea mays]
gi|414588719|tpg|DAA39290.1| TPA: prenyltransferase/ zinc ion binding protein [Zea mays]
Length = 342
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/319 (46%), Positives = 207/319 (64%), Gaps = 9/319 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
G C D+E +HK+AQ LPGLA+ CVD TTGD F +P VAV +R EMV+Y+T+RS
Sbjct: 15 GPLIQCPYCDSEAMHKLAQILLPGLAAVCVDGTTGDPFHSPSVVAVDLRREMVDYITQRS 74
Query: 82 ETFVAESVILEDPDQ----AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDR 137
E+F+A+++I + +Q A V D P++ +S F+D+F +KRN+ VSGW+ S+ R+D+
Sbjct: 75 ESFIADALIESEANQEGPDAAVPDDPFEAVSVFMDDFGSTKRNIIGHVSGWLLSDSRDDK 134
Query: 138 IDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISM 197
IDD +QEME + FW + RREA+A LLKNVD + FHC K+ SE L +H C F +
Sbjct: 135 IDDLVQEMEATRFWPLERREAVAETLLKNVDLRTRFHCPEKYESEARLADHKQQCSFRPV 194
Query: 198 ICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
CPN+GC A+ S HD+ CP+K + CEQ C L+RRDMDRHC+TVC M+ CPF
Sbjct: 195 ACPNDGCRARVSVRCARDHDAACPYKPLQCEQGCEKRLLRRDMDRHCVTVCPMRPMKCPF 254
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRD-KPLKVLKNRVEELEKSYFD-KLA 315
GC S+ P +++H L HL+ +L+ +H+ + LK+ +LEK D KLA
Sbjct: 255 ---GCDSSFPDRDLEKHCAQFLRPHLIKVLKAIHKKARSEDELKDLALKLEKYDGDGKLA 311
Query: 316 EAPDVRSLSFAIKDLEAKL 334
+A D R L+ A+KDLEAK+
Sbjct: 312 KALDARPLTNAVKDLEAKM 330
>gi|125578705|gb|EAZ19851.1| hypothetical protein OsJ_35436 [Oryza sativa Japonica Group]
Length = 308
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 209/305 (68%), Gaps = 8/305 (2%)
Query: 35 VHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETFVAESVILEDP 94
+HK+AQ LPGLA+ +D TTGD+FR P VAV +R EMV+Y+T+RSETF+++S+I +
Sbjct: 1 MHKLAQLLLPGLAAVSIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRSETFISDSLIESEA 60
Query: 95 DQ---AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRIDDFLQEMEISGFW 151
Q E+ + P++++S F+D+F+ +KRN+ VSGW+ S+ RED+IDDF+QEME++ FW
Sbjct: 61 SQDEEKEMPEDPFEVVSIFMDDFSSTKRNIIGHVSGWLMSDNREDKIDDFVQEMEMTRFW 120
Query: 152 SINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAG 211
+ RREAIA +LLKNVD K ++HC K+ +E+ L +H C F + CPN+GC AK S
Sbjct: 121 PLERREAIAEVLLKNVDLKTKYHCPEKYENEQRLADHKAQCSFRPVTCPNDGCRAKVSVR 180
Query: 212 HLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMI 271
+ HDS C FKI+ CEQ C LMRRDMDRHC+TVC M+ CPF GC S+ P+ +
Sbjct: 181 CMTDHDSACLFKILTCEQSCEKRLMRRDMDRHCVTVCPMRPMKCPF---GCDSSFPERNL 237
Query: 272 QQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAEAPDVRSLSFAIKD 329
+QH + L HLL +L+ +H+ + K+ LEK D KL ++ +VRSL+ +K+
Sbjct: 238 EQHCSEFLQPHLLKVLKAIHKKGFTDEGFKDHALLLEKQDIDGKLGKSREVRSLTNVVKN 297
Query: 330 LEAKL 334
LEAK+
Sbjct: 298 LEAKM 302
>gi|195653965|gb|ACG46450.1| prenyltransferase/ zinc ion binding protein [Zea mays]
Length = 342
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 146/319 (45%), Positives = 205/319 (64%), Gaps = 9/319 (2%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
G C D+E +HK+AQ LPGLA+ CVD TTGD F +P VAV +R EMV+Y+T+RS
Sbjct: 15 GPLIQCPYCDSEAMHKLAQILLPGLAAVCVDGTTGDPFHSPSVVAVDLRREMVDYITQRS 74
Query: 82 ETFVAESVILEDPDQ----AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDR 137
E+F+A+++I + +Q A V D P++ +S F+D+F +KRN+ VSGW+ S+ R+D+
Sbjct: 75 ESFIADALIESEANQEGPDAAVPDDPFEAVSVFMDDFGSTKRNIIGHVSGWLLSDSRDDK 134
Query: 138 IDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISM 197
IDD +QEME + FW + RREA+A LLKNVD + FHC K+ SE L +H C F +
Sbjct: 135 IDDLVQEMEATRFWPLERREAVAETLLKNVDLRTRFHCPEKYESEARLADHKQQCSFRPV 194
Query: 198 ICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
CPN+GC A+ S HD+ CP+K + CEQ C L+RRDMDRHC+TVC M+ CPF
Sbjct: 195 ACPNDGCRARVSVRCARDHDAACPYKPLQCEQGCEKRLLRRDMDRHCVTVCPMRPMKCPF 254
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRD-KPLKVLKNRVEELEKSYFD-KLA 315
GC S+ P +++H L HL+ +L+ +H+ + LK+ +LEK D KLA
Sbjct: 255 ---GCDSSFPDRDLEKHCAQFLRPHLIKVLKAIHKKARSEDELKDLALKLEKYDGDGKLA 311
Query: 316 EAPDVRSLSFAIKDLEAKL 334
+A D L+ A+K LEAK+
Sbjct: 312 KALDAXPLTNAVKXLEAKM 330
>gi|326501824|dbj|BAK06404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 209/326 (64%), Gaps = 5/326 (1%)
Query: 20 DGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTK 79
D GL F CNL D E+VH + Q L LA+A VD+TTGD+F++P SVA G++ E+ Y+ +
Sbjct: 10 DKGLNFQCNLCDIEVVHSMTQLLLHALATASVDSTTGDMFKSPSSVATGMKAELSGYMVQ 69
Query: 80 RSETFVAESVI--LEDPDQ-AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKRED 136
RSET V ES+ + DQ + S P + +SD +DEF SKR + S VSG SSE R +
Sbjct: 70 RSETLVRESMDGGEDHSDQLTKASSRPTEFLSDLIDEFVTSKRGMLSHVSGLFSSESRLN 129
Query: 137 RIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFIS 196
+I DF+Q++E+ FW+ + R+A A +L+N+D K FHC +F+ +L EH C F
Sbjct: 130 KIKDFVQKLEVDNFWAQDERKATAGAILENIDIKGMFHCPERFDMPDKLAEHTSECKFRI 189
Query: 197 MICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
+ C N+GC A F A H+EKHD+VCPFK++PCEQ C +MR +MD+HC T+C MKL NCP
Sbjct: 190 LNCTNDGCVASFCAIHIEKHDTVCPFKLLPCEQLCEQHVMRSEMDKHCTTICPMKLTNCP 249
Query: 257 FYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRD-KPLKVLKNRVEELEK-SYFDKL 314
F+ +GC++ PQC + H L +HL Y+++ + R + + R++ LEK ++L
Sbjct: 250 FFRIGCETAFPQCSLDNHCSRFLHTHLTYVVKVITRQGDSVNDMDQRLQLLEKVQSLNEL 309
Query: 315 AEAPDVRSLSFAIKDLEAKLGPFKED 340
+ A DV+SL+ K+ E+K+ + D
Sbjct: 310 SGALDVKSLTLITKEQESKINKLERD 335
>gi|125589459|gb|EAZ29809.1| hypothetical protein OsJ_13868 [Oryza sativa Japonica Group]
Length = 319
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/303 (48%), Positives = 208/303 (68%), Gaps = 8/303 (2%)
Query: 37 KIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQ 96
K AQ LPGLA+ C+D TTGD+FR P VAV +R EMV+Y+T+RSETF+++S+I + Q
Sbjct: 15 KFAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRSETFISDSLIESEASQ 74
Query: 97 A---EVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRIDDFLQEMEISGFWSI 153
E+ + P++I+S F+D+F+ +KRN+ VSGW+ S+ RED+IDDF+QEME++ FW +
Sbjct: 75 DQENEMPEDPFEIVSIFMDDFSSTKRNIIGHVSGWLMSDSREDKIDDFVQEMEMTRFWPL 134
Query: 154 NRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHL 213
RRE IA +LLKNVD K ++HC K+ +E+ L +H C F + CPN+GC AK S +
Sbjct: 135 ERREVIAEVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVTCPNDGCRAKVSVRCM 194
Query: 214 EKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
+ HDS C FKI+ CEQ C L+R DMDRHC+TVC M+ CPF GC S+ P+ ++Q
Sbjct: 195 QDHDSACLFKILTCEQNCEKRLLRHDMDRHCVTVCPMRPMKCPF---GCDSSFPERNLEQ 251
Query: 274 HRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAEAPDVRSLSFAIKDLE 331
H + L +HL +L+ +H+ + LK+ LEK D KLA++ DVRSL+ +K+LE
Sbjct: 252 HCSEFLQAHLHKLLKAIHKKGFTDEGLKDHALLLEKHDNDGKLAKSRDVRSLTNVVKNLE 311
Query: 332 AKL 334
AK+
Sbjct: 312 AKI 314
>gi|357150049|ref|XP_003575323.1| PREDICTED: uncharacterized protein LOC100843188 [Brachypodium
distachyon]
Length = 354
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/324 (44%), Positives = 212/324 (65%), Gaps = 5/324 (1%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
L + CNL DTE+VH + Q L GLA+ VD++TGDIF++P SVAVG+R E+ YL +RS
Sbjct: 12 SLNYQCNLCDTELVHSMTQLLLHGLATGSVDSSTGDIFKSPASVAVGMRAELAGYLIQRS 71
Query: 82 ETFVAESVI--LEDPDQA-EVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ET V ES+ + DQ + S P + +SD +D+F SKRN+ S VSG++SSE R ++I
Sbjct: 72 ETLVRESINGGEDHSDQLIKASTRPTEFMSDLIDDFVASKRNILSHVSGFLSSESRLNKI 131
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
+FLQ++E FW+ + R+A +LK++D K FHC +F+ +L+EH+ C F +
Sbjct: 132 KEFLQKLETENFWAQDERKATGETILKSIDTKCIFHCPERFDMPDKLSEHLSQCKFRMVN 191
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
C N+GC SA H+E+H +VCPFK+IPCEQ C +MR +MD+HC TVC MKL NCPFY
Sbjct: 192 CVNDGCAVSCSAIHMEEHGTVCPFKLIPCEQLCEQHVMRCEMDKHCATVCPMKLINCPFY 251
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL-HRDKPLKVLKNRVEELEK-SYFDKLAE 316
VGC++ QC + +H L HL+YIL+ + R+ + + R++ LEK ++LA
Sbjct: 252 EVGCETAFSQCCLDKHCSGFLQIHLMYILKVITRRNTFVNDMDQRLQLLEKVQSLNELAG 311
Query: 317 APDVRSLSFAIKDLEAKLGPFKED 340
A DVR+L+ K+ E+K+ ++D
Sbjct: 312 ALDVRALTLITKEQESKIKKLEQD 335
>gi|212723912|ref|NP_001131631.1| uncharacterized protein LOC100192987 [Zea mays]
gi|194692092|gb|ACF80130.1| unknown [Zea mays]
gi|223942403|gb|ACN25285.1| unknown [Zea mays]
gi|413937690|gb|AFW72241.1| hypothetical protein ZEAMMB73_979706 [Zea mays]
gi|413937691|gb|AFW72242.1| hypothetical protein ZEAMMB73_979706 [Zea mays]
gi|413937692|gb|AFW72243.1| hypothetical protein ZEAMMB73_979706 [Zea mays]
Length = 352
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 208/318 (65%), Gaps = 5/318 (1%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
G + C+L DTEIVH +A+ L GLA+A VD+TTGDIF++ SVA ++TE+ Y+ R+
Sbjct: 8 GCSLRCDLCDTEIVHSMAELLLRGLATASVDSTTGDIFKSASSVAAAVKTELENYMLVRT 67
Query: 82 ETFVAESV--ILEDPDQ-AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
E+ + E V + DQ + S P + +SD + +F SKRNL S VSG++SSE R +RI
Sbjct: 68 ESLIREFVDGAQDHSDQLMKASTRPTEFLSDLIGDFVASKRNLLSHVSGFLSSESRLNRI 127
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DF+Q+ME+ W+++ R+A + +L+++D K FHC KF + +L +H C F +
Sbjct: 128 KDFMQKMEMENVWTLDVRQATSETILESIDMKCIFHCPEKFVEQDKLVDHRSRCKFRVVG 187
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
C N+GC+ SA H E+HDS+CPFK +PCEQ C +MR +MD+HC TVC MKL NCPFY
Sbjct: 188 CENDGCSVSLSAIHSEEHDSICPFKALPCEQLCEQHVMRSEMDKHCATVCAMKLINCPFY 247
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKSY-FDKLAE 316
VGC++ PQ ++ H L +H+LY+LQ R + + + R++ LEK+ ++++
Sbjct: 248 HVGCETAFPQGNLENHCSKLLQTHMLYVLQASTRQNAAVNDMNQRLQLLEKAQSLNEISG 307
Query: 317 APDVRSLSFAIKDLEAKL 334
A DVRSL+ IK+ EAK+
Sbjct: 308 ALDVRSLTLIIKEQEAKI 325
>gi|242062262|ref|XP_002452420.1| hypothetical protein SORBIDRAFT_04g025460 [Sorghum bicolor]
gi|241932251|gb|EES05396.1| hypothetical protein SORBIDRAFT_04g025460 [Sorghum bicolor]
Length = 351
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 207/318 (65%), Gaps = 5/318 (1%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
G + C+L DT++VH +A+ L GLA+A VD+TTGDIF++ SV V ++TE+ L R+
Sbjct: 8 GHSSRCDLCDTDVVHSMAEILLCGLATASVDSTTGDIFKSASSVVVAVKTELENDLLART 67
Query: 82 ETFVAESV--ILEDPDQ-AEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
E+ + E V + DQ + S P + +SD +D+F SKRNL S VSG++SSE R ++I
Sbjct: 68 ESLIREFVDGAQDHSDQLMKASTRPTEFLSDLIDDFVASKRNLLSHVSGFLSSESRLNKI 127
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMI 198
DF+Q+ME W+++ R+A + +L+++D K FHC KF+ + +L +H C F +
Sbjct: 128 KDFMQKMEKENVWTLDVRQATSETILESIDMKCIFHCPEKFDEQDKLADHRSQCKFRVVD 187
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
C N+GC+ SA +E+HDS+CPFK +PC Q C +MR +M++HC TVC MKL NCPFY
Sbjct: 188 CKNDGCSISLSAIRIEEHDSICPFKALPCVQLCEQHVMRCEMEKHCATVCAMKLINCPFY 247
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKSY-FDKLAE 316
VGC++ PQ ++ H L +HLLY+LQ R + + + R++ LEK+ ++++
Sbjct: 248 HVGCETAFPQGNLENHCSKLLQTHLLYVLQASTRQNAAVNDMNQRLQLLEKAQSLNEISG 307
Query: 317 APDVRSLSFAIKDLEAKL 334
A DVRSL+ IK+ EAK+
Sbjct: 308 ALDVRSLTLIIKEQEAKI 325
>gi|147860526|emb|CAN81873.1| hypothetical protein VITISV_038365 [Vitis vinifera]
Length = 197
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 147/180 (81%)
Query: 1 MDVTSSGAEVVPEKIEDKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFR 60
MD+ + V+PEK ED K G +F C+ DTEIVHKIAQ LPGLASACVDNTTGD+FR
Sbjct: 1 MDLPAIDVGVIPEKFEDVKVEGPSFPCDFFDTEIVHKIAQALLPGLASACVDNTTGDLFR 60
Query: 61 TPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN 120
+P SVAV IR EMVE LT+RSE+FVAESVILED EVSDHP+DIISDFVD+FA SKRN
Sbjct: 61 SPASVAVDIRKEMVECLTQRSESFVAESVILEDGPDTEVSDHPFDIISDFVDDFASSKRN 120
Query: 121 LFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFN 180
LFSRVSGW+ SE+RED+IDDF+QEMEI+ FW ++RR AIA LLKN DFKN FHCNM F+
Sbjct: 121 LFSRVSGWLLSERREDKIDDFVQEMEINSFWLLDRRAAIAQTLLKNADFKNTFHCNMNFS 180
>gi|413918263|gb|AFW58195.1| hypothetical protein ZEAMMB73_328439 [Zea mays]
Length = 288
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/292 (44%), Positives = 195/292 (66%), Gaps = 15/292 (5%)
Query: 51 VDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQ----AEVSDHPYDI 106
+D TTGD FR+P +VAV +R +MV+Y+T+RS++F+A+++I + +Q EV D P+D
Sbjct: 1 MDGTTGDPFRSPSTVAVDLRRDMVDYITQRSDSFIADALIESEANQDVPGVEVPDDPFDT 60
Query: 107 ISDFVDEFALSKRNLFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKN 166
+S F+D+FA +KRN+ VSGW+ ++ R D+IDDF+QEME + FW + RREA+A +LLKN
Sbjct: 61 VSIFMDDFASTKRNIIGHVSGWLLTDSRNDKIDDFVQEMEATKFWPLERREAVAELLLKN 120
Query: 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIP 226
++ K FHC K+ +E+ L +H C F C N+GC A+ S ++ HD+ C +K++
Sbjct: 121 INLKTRFHCPEKYENEERLEDHKAQCSFRH--CANDGCRARVSVRCVKDHDAACVYKLLQ 178
Query: 227 CEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYI 286
CEQ L+RRDMDRHCIT+ M+ CPF GC S+ P +++H + L HLL +
Sbjct: 179 CEQGYDKRLLRRDMDRHCITIYPMRPIKCPF---GCDSSFPDRDLERHCTEFLQPHLLMV 235
Query: 287 LQKLHRD-KPLKVLKNRVEELEKSYFD---KLAEAPDVRSLSFAIKDLEAKL 334
L+ +H+ + + LK+ ++LEK FD KLA+A D R L+ +KDLEAK+
Sbjct: 236 LKTIHKKGRSEQDLKDLAQKLEK--FDGDGKLAKALDARPLTNVVKDLEAKM 285
>gi|326491283|dbj|BAK05741.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528319|dbj|BAJ93341.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 369
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 198/344 (57%), Gaps = 39/344 (11%)
Query: 25 FHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETF 84
C D ++VHK+AQ LPGLA+ACVD+T G S+AV +R E+V Y+ RS +
Sbjct: 37 LPCPNCDIQVVHKLAQLLLPGLAAACVDSTLGS---PSSSLAVQLRAELVRYVAHRSSS- 92
Query: 85 VAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSGWMS-----SEKREDRID 139
AE+ EDP D P + ++ F+D+FA SKR++ ++GW+ + R+DRI+
Sbjct: 93 PAEAAE-EDPID---RDDPAEALAAFLDDFAGSKRSVVVSIAGWLPYLGGGDDGRDDRIE 148
Query: 140 DFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHML-HCGFISMI 198
D ++EME S FW ++RREA+A LL+ +D F C + + +EL +H+ CGF +
Sbjct: 149 DLVEEMEASRFWPVDRREAVARDLLRCLDDGGRFRCRDELGTPEELADHVAARCGFRPVR 208
Query: 199 CPNE--GCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
C N+ GC A+ SA + HD C FK++PCEQ+C ++ RR MDRHC+TVC MKLANCP
Sbjct: 209 CRNQAQGCRAEVSACRADAHDDACAFKLLPCEQRCGVSVARRQMDRHCVTVCPMKLANCP 268
Query: 257 FYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL----------HRDKPLKVLKNRVEEL 306
FY +GC+S P C + H C+ L +L HRD + R+ L
Sbjct: 269 FYQLGCESAFPACNLGSH-----CAEFLRHHLRLLLAPSRNGAGHRDP-----EERLLRL 318
Query: 307 EKSYFD-KLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEG 349
EK D L +A DVRSL+ A+ LE K+ ED + Y G+G
Sbjct: 319 EKCDSDGALRQALDVRSLTNALAQLEKKMD--AEDGSSGYPGDG 360
>gi|168064199|ref|XP_001784052.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664438|gb|EDQ51158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 326
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 175/308 (56%), Gaps = 5/308 (1%)
Query: 27 CNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETFVA 86
C D E VH + Q L LA ACV+ T GD F V I+ EM+EYL ++SE +
Sbjct: 3 CGYYDVEQVHYLTQALLVTLAKACVEKTAGDPFSQRAGVLPDIKKEMLEYLHQQSEAYAC 62
Query: 87 ESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSG-WMSSEKREDRIDDFLQEM 145
S I +V P ++ D + F SK+NLFSRVS + S K+ED++DDF++E+
Sbjct: 63 GSGI-SSHGMGQVLP-PSKVVDDIFESFIKSKKNLFSRVSSKIIDSIKKEDKVDDFVKEL 120
Query: 146 EISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCN 205
+ +G W + RREA A LLK VD +HC MKF+++KEL +H C C N GC
Sbjct: 121 DRTGVWVVGRREARAKALLKRVDRSKTYHCEMKFDTDKELEDHRSTCNLRPYNCKNNGCG 180
Query: 206 AKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQST 265
A +SA H HD+ CP K++ C+ +C + R +M+ H +TVC MK+ CP++AVGC
Sbjct: 181 AFYSAHHAAAHDTSCPHKLLSCKLECGSLIPRGEMEAHVVTVCPMKIVKCPYHAVGCLHA 240
Query: 266 IPQCMIQQHRHDDLCSHLLYILQKLH-RDKPLKVLKNRVEELEKSY-FDKLAEAPDVRSL 323
+ Q +++QH + + HLL LQ + + + +R+ LEK+ + +EA D+ ++
Sbjct: 241 MAQKLLEQHCTEHMGQHLLETLQYVQNHEVAIGSHVHRIVLLEKALQLTQRSEAVDIGTV 300
Query: 324 SFAIKDLE 331
+K+ E
Sbjct: 301 LLTVKEHE 308
>gi|302799577|ref|XP_002981547.1| hypothetical protein SELMODRAFT_421085 [Selaginella moellendorffii]
gi|300150713|gb|EFJ17362.1| hypothetical protein SELMODRAFT_421085 [Selaginella moellendorffii]
Length = 725
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 163/287 (56%), Gaps = 6/287 (2%)
Query: 27 CNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETFVA 86
C D E +HK L LA+ACV+ T GD F PGSV ++ E++E L +S+ +
Sbjct: 402 CGYYDVEQLHKATGLLLLTLAAACVEKTIGDPFNQPGSVVGDLKRELIESLESQSQQYAG 461
Query: 87 ESV-ILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSG-WMSSEKREDRIDDFLQE 144
++ L D QA P I+ F+D F SK NL +RVS +S++K+ED+I++F+ E
Sbjct: 462 AALGSLSDRVQA---PKPMKILQGFLDGFVRSKANLLARVSSRILSNDKKEDKIEEFVGE 518
Query: 145 MEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGC 204
++ SG W + RRE +A LL+ +D HC M+F S +EL H C C NEGC
Sbjct: 519 LDRSGAWMVGRREMLARSLLRRIDRSMVAHCEMRFGSSEELAAHKARCALRPTTCTNEGC 578
Query: 205 NAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQS 264
+SA HD+ C FK++ CEQ C ++ R DMDRHC++VC MK+ CPF+ VGC
Sbjct: 579 TDVYSAVQGGGHDARCAFKVLTCEQGCGQSVARADMDRHCVSVCPMKMVTCPFHHVGCVD 638
Query: 265 TIPQCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKSY 310
+PQ ++ H ++ SHLL +L L R + + R+ LEK+
Sbjct: 639 RLPQGTVEVHCAGNVSSHLLAVLHVLQRLEVGIASQSQRISNLEKAL 685
>gi|302760223|ref|XP_002963534.1| hypothetical protein SELMODRAFT_438363 [Selaginella moellendorffii]
gi|300168802|gb|EFJ35405.1| hypothetical protein SELMODRAFT_438363 [Selaginella moellendorffii]
Length = 626
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 163/287 (56%), Gaps = 6/287 (2%)
Query: 27 CNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETFVA 86
C D E +HK L LA+ACV+ T GD F PGSV ++ E++E L +S+ +
Sbjct: 303 CGYYDVEQLHKATGLLLLTLAAACVEKTIGDPFNQPGSVVGDLKRELIESLESQSQQYAG 362
Query: 87 ESV-ILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSG-WMSSEKREDRIDDFLQE 144
++ L D QA P I+ F+D F SK NL +RVS +S++K+ED+I++F+ E
Sbjct: 363 AALGSLSDRVQAP---KPMKILQGFLDGFVRSKANLLARVSSRILSNDKKEDKIEEFVGE 419
Query: 145 MEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGC 204
++ SG W + RRE +A LL+ +D HC M+F S +EL H C C NEGC
Sbjct: 420 LDRSGAWMVGRREMLARSLLRRIDRSMVAHCEMRFGSSEELAAHKARCALRPTTCTNEGC 479
Query: 205 NAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQS 264
+SA HD+ C FK++ CEQ C ++ R DMDRHC++VC MK+ CPF+ VGC
Sbjct: 480 TDVYSAVQGGGHDARCAFKVLTCEQGCGQSVARADMDRHCVSVCPMKMVTCPFHHVGCVD 539
Query: 265 TIPQCMIQQHRHDDLCSHLLYILQKLHR-DKPLKVLKNRVEELEKSY 310
+PQ ++ H ++ SHLL +L L R + + R+ LEK+
Sbjct: 540 RLPQGTVEVHCAGNVSSHLLAVLHVLQRLEVGIASQSQRISNLEKAL 586
>gi|357131480|ref|XP_003567365.1| PREDICTED: uncharacterized protein LOC100833260 [Brachypodium
distachyon]
Length = 346
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 196/348 (56%), Gaps = 34/348 (9%)
Query: 11 VPEKIE-DKKDGGLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVG- 68
+P +E + D + F C D ++VH++AQ L GLA+ACVD+TT F + S
Sbjct: 5 IPAIVEAEVDDDRVLFPCPNCDIQMVHRLAQLLLSGLATACVDSTTFSFFFSLASARDSS 64
Query: 69 --------IRTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRN 120
R E+V+Y+T RS S+IL++ ++ D P + +S F+D+FA +KRN
Sbjct: 65 SSSVVAVETRKELVDYITHRST-----SIILDNTEETMSMD-PSENLSIFLDDFASTKRN 118
Query: 121 LFSRVSGWMS------SEKREDRIDDFLQEMEISGFWSINRREAIAH--ILLKNVDFKNE 172
+ V GW+ S+ R+DRIDD +QEME + FW I+ REAIA +L+ N+D
Sbjct: 119 V---VVGWLGLGLPYLSDSRDDRIDDLVQEMETTRFWPIHAREAIARSLLLVGNLDVSGR 175
Query: 173 FHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCP 232
FHC K + + + C F + C N+GC A+ SA +HD VCP K++PCEQ C
Sbjct: 176 FHCREKLERKAADADGHVDCSFRPVRCQNQGCRAEVSALRAHEHDEVCPLKLLPCEQHCE 235
Query: 233 DTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLH- 291
+++R MDRHCIT C MKL NCPFY +GC+S P C ++ H L SHL IL H
Sbjct: 236 LSVIRSQMDRHCITSCPMKLTNCPFYQLGCESAFPSCNLESHCAQFLQSHLRKILLT-HV 294
Query: 292 ----RDKPLKVLKNRVEELEKS-YFDKLAEAPDVRSLSFAIKDLEAKL 334
R L +++ R+ LEK L +A DVRSL+ A+ +LE L
Sbjct: 295 PVSDRHDHLDLVEKRLLLLEKCDSHATLRKALDVRSLTKALAELEKSL 342
>gi|167999757|ref|XP_001752583.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696114|gb|EDQ82454.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 373
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 184/317 (58%), Gaps = 8/317 (2%)
Query: 25 FHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETF 84
F C+ D E V +++ L LA+ACV+ T+G + + V G++ EM+EYL ++S+T+
Sbjct: 10 FECDFCDVEEVKRLSHALLVALAAACVEKTSGTLSQRVA-VLPGVKKEMLEYLNQQSQTY 68
Query: 85 VAESVILEDPDQAE---VSD--HPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRID 139
S L+ + + VS +P I+ D ++ F SKRN+FSRVSG + + ++ID
Sbjct: 69 ANSSSSLQRSNSLQHVFVSQVTYPTHIVKDMLETFIKSKRNMFSRVSGIVIDAHKGEKID 128
Query: 140 DFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMIC 199
DF+ E++ + W RRE +A LLK +D K +HC M+F E EL++H C + C
Sbjct: 129 DFVHELDQTDMWLAGRREVLAKALLKRIDQKKTYHCGMRFEIEDELDKHKTSCVLRPITC 188
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYA 259
PNEGC FSA H++ HD+ C +K++PC +C ++ R++M+ HC TVC MK CP++
Sbjct: 189 PNEGCGDVFSALHVDAHDASCVYKLLPCFLECESSVQRKEMENHCATVCPMKKIKCPYHT 248
Query: 260 VGCQSTIPQCMIQQHRHDDLCSHLLYILQKLH-RDKPLKVLKNRVEELEKSY-FDKLAEA 317
VGC + Q +++ H + + HLL LQ + D L+ + +EK+ + +EA
Sbjct: 249 VGCPHVMAQGLLESHCTEYVGQHLLETLQHVQNHDVALQAHAQSLLFVEKAVQLAQRSEA 308
Query: 318 PDVRSLSFAIKDLEAKL 334
V +++ +K+ E ++
Sbjct: 309 VSVGNMNVTVKEQENRV 325
>gi|38605870|emb|CAD39782.3| OSJNBa0060B20.8 [Oryza sativa Japonica Group]
Length = 277
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 138/201 (68%), Gaps = 7/201 (3%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ C+D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GLLLQCPYCDSEAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 74
Query: 82 ETFVAESVILEDPDQA---EVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ P++I+S F+D+F+ +KRN+ VSGW+ S+ RED+I
Sbjct: 75 ETFISDSLIESEASQDQENEMPVDPFEIVSIFMDDFSSTKRNIIGHVSGWLMSDSREDKI 134
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLH-CGFISM 197
DDF+QEME++ FW + RRE IA +LLKNV+ +N+ +C + ++++ H + C M
Sbjct: 135 DDFVQEMEMTRFWPLERREVIAEVLLKNVEPENQ-NCEKRL-LRRDMDRHCVTVCPMRPM 192
Query: 198 ICPNEGCNAKFSAGHLEKHDS 218
CP GC++ F +LE+H S
Sbjct: 193 KCPF-GCDSSFPERNLEQHCS 212
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
Query: 226 PCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLY 285
P Q C L+RRDMDRHC+TVC M+ CPF GC S+ P+ ++QH + L +HL
Sbjct: 165 PENQNCEKRLLRRDMDRHCVTVCPMRPMKCPF---GCDSSFPERNLEQHCSEFLQAHLHK 221
Query: 286 ILQKLHRDKPL-KVLKNRVEELEKSYFD-KLAEAPDVRSLSFAIKDLEAKL 334
+L+ +H+ + LK+ LEK D KLA++ DVRSL+ +K+LEAK+
Sbjct: 222 LLKVIHKKGFTDEGLKDHALLLEKHDNDGKLAKSRDVRSLTNVVKNLEAKI 272
>gi|297722867|ref|NP_001173797.1| Os04g0217900 [Oryza sativa Japonica Group]
gi|255675230|dbj|BAH92525.1| Os04g0217900 [Oryza sativa Japonica Group]
Length = 266
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 138/201 (68%), Gaps = 7/201 (3%)
Query: 22 GLTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRS 81
GL C D+E +HK+AQ LPGLA+ C+D TTGD+FR P VAV +R EMV+Y+T+RS
Sbjct: 15 GLLLQCPYCDSEAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRS 74
Query: 82 ETFVAESVILEDPDQA---EVSDHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRI 138
ETF+++S+I + Q E+ P++I+S F+D+F+ +KRN+ VSGW+ S+ RED+I
Sbjct: 75 ETFISDSLIESEASQDQENEMPVDPFEIVSIFMDDFSSTKRNIIGHVSGWLMSDSREDKI 134
Query: 139 DDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLH-CGFISM 197
DDF+QEME++ FW + RRE IA +LLKNV+ +N+ +C + ++++ H + C M
Sbjct: 135 DDFVQEMEMTRFWPLERREVIAEVLLKNVEPENQ-NCEKRL-LRRDMDRHCVTVCPMRPM 192
Query: 198 ICPNEGCNAKFSAGHLEKHDS 218
CP GC++ F +LE+H S
Sbjct: 193 KCPF-GCDSSFPERNLEQHCS 212
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 226 PCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLY 285
P Q C L+RRDMDRHC+TVC M+ CPF GC S+ P+ ++QH + L +HL
Sbjct: 165 PENQNCEKRLLRRDMDRHCVTVCPMRPMKCPF---GCDSSFPERNLEQHCSEFLQAHLHK 221
Query: 286 ILQKLHR 292
+L+ +H+
Sbjct: 222 LLKVIHK 228
>gi|302796904|ref|XP_002980213.1| hypothetical protein SELMODRAFT_444463 [Selaginella moellendorffii]
gi|300151829|gb|EFJ18473.1| hypothetical protein SELMODRAFT_444463 [Selaginella moellendorffii]
Length = 355
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 168/323 (52%), Gaps = 24/323 (7%)
Query: 23 LTFHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIF-RTPGSV---AVGIRTEMVEYLT 78
L C D + +I + LA+A ++ +G+IF R P S+ A ++ EM+++L
Sbjct: 11 LLLDCGYMDVRELQRIERSLQRSLAAATLERASGEIFGRRPSSLVALAAEVKKEMLDFLE 70
Query: 79 KRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVS---GWMSSEKRE 135
+ S++F E + P + D + EF SK+NL R+S G RE
Sbjct: 71 QSSDSF------------REFAP-PSAAVDDLLGEFVRSKKNLLRRMSTKIGLADQTSRE 117
Query: 136 DRIDDFLQEMEISG-FWSINRREAIAHILLKNVDF-KNEFHCNMKFNSEKELNEHMLHCG 193
++D+ L +++ G W + + E+ A LL VD + HC + +S + L H C
Sbjct: 118 GKLDEILGDLQRGGGAWDLGQCESFARSLLARVDHHRQSSHCRERVDSLEALAAHKKDCR 177
Query: 194 FISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
F + C N+GC FSA HD CPFK++ CEQ C D + R +M+RHC TVC MK+
Sbjct: 178 FRPLACENDGCGEIFSAMDAASHDRECPFKVLDCEQGCGDGVARMEMERHCSTVCSMKMV 237
Query: 254 NCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEELEKSY-F 311
+CPF + GC +PQ ++QH +HLL++L+ L R + L R+ LEKS
Sbjct: 238 SCPFSSAGCSHVLPQGALEQHHSSMQTTHLLFVLESLERHRLGSDSLVQRLSILEKSMSL 297
Query: 312 DKLAEAPDVRSLSFAIKDLEAKL 334
+ A DV+SL+ +K+ EAK+
Sbjct: 298 TERISAADVKSLAITVKEQEAKI 320
>gi|302759374|ref|XP_002963110.1| hypothetical protein SELMODRAFT_404704 [Selaginella moellendorffii]
gi|300169971|gb|EFJ36573.1| hypothetical protein SELMODRAFT_404704 [Selaginella moellendorffii]
Length = 283
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 130/239 (54%), Gaps = 7/239 (2%)
Query: 103 PYDIISDFVDEFALSKRNLFSRVS---GWMSSEKREDRIDDFLQEMEISG-FWSINRREA 158
P + D + EF SK+NL R+S G RE ++D+ L +++ G W + + E+
Sbjct: 18 PSAAVDDLLGEFVRSKKNLLRRMSTKIGLADQTSREGKLDEILGDLQRGGGAWDLGQCES 77
Query: 159 IAHILLKNVDF-KNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD 217
A LL VD + HC + +S + L H C F + C N+GC FSA HD
Sbjct: 78 FARSLLARVDHHRQSSHCRERVDSLEALAAHKKDCRFRPLACENDGCGEIFSAMDAASHD 137
Query: 218 SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277
CPFK++ CEQ C D + R +M+RHC TVC MK+ +CPF + GC +PQ ++QH
Sbjct: 138 RECPFKVLDCEQGCGDGVARMEMERHCSTVCSMKMVSCPFSSAGCSHVLPQGALEQHHSS 197
Query: 278 DLCSHLLYILQKLHRDKP-LKVLKNRVEELEKSY-FDKLAEAPDVRSLSFAIKDLEAKL 334
+HLL++L+ L R + L R+ LEKS + A DV+SL+ +K+ +AK+
Sbjct: 198 MQTTHLLFVLESLERHRLGSDSLVQRLSILEKSMSLTERISAADVKSLAITVKEQDAKI 256
>gi|222628392|gb|EEE60524.1| hypothetical protein OsJ_13860 [Oryza sativa Japonica Group]
Length = 189
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 109/161 (67%), Gaps = 3/161 (1%)
Query: 44 PGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQ---AEVS 100
PGL +++ + P VAV +R EMV+Y+T+RSETF+++S+I + Q E+
Sbjct: 14 PGLLRYALNDERANSPGNPSVVAVDMRKEMVDYVTQRSETFISDSLIESEASQDQENEMP 73
Query: 101 DHPYDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIA 160
P++I+S F+D+F+ +KRN+ VSGW+ S+ RED+IDDF+QEME++ FW + RRE IA
Sbjct: 74 VDPFEIVSIFMDDFSSTKRNIIGHVSGWLMSDSREDKIDDFVQEMEMTRFWPLERREVIA 133
Query: 161 HILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPN 201
+LLKNVD K ++HC K+ +E+ L +H C F + CPN
Sbjct: 134 EVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVTCPN 174
>gi|224091539|ref|XP_002309281.1| predicted protein [Populus trichocarpa]
gi|222855257|gb|EEE92804.1| predicted protein [Populus trichocarpa]
Length = 102
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 74/101 (73%)
Query: 111 VDEFALSKRNLFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFK 170
VD+FA KRNLF +VS W+ +E RED+IDDF+QEME + FW + +RE IA IL+KNVD+K
Sbjct: 2 VDDFASLKRNLFGQVSRWLLNEMREDKIDDFMQEMETNRFWLLEKREIIAQILVKNVDYK 61
Query: 171 NEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAG 211
N FH + KFN+ +EL EH+ +CGF +M C N GC F A
Sbjct: 62 NIFHYDKKFNTTQELAEHIGNCGFKTMNCTNNGCTTVFCAS 102
>gi|308802772|ref|XP_003078699.1| TNF receptor-associated factor (ISS) [Ostreococcus tauri]
gi|116057152|emb|CAL51579.1| TNF receptor-associated factor (ISS) [Ostreococcus tauri]
Length = 1449
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 17/233 (7%)
Query: 107 ISDFVDEFALSKRNLFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKN 166
+ D ++ + SKR S V G ++ + +E+++ W ++R A+A L+++
Sbjct: 76 LLDAINNWTASKRGFMSEVLG-----SSDENVRAMEKELDLVDVWPDSKRHALAVRLVRD 130
Query: 167 -VDFKNEFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKI 224
D ++ HC+ F+ E+ L H L C F M C NEGC A +S + EKHDS+C FK+
Sbjct: 131 HFDVNHQAHCSTSFDDEEGLYAHKLKDCSFRPMSCENEGCVATYSLKNQEKHDSMCSFKV 190
Query: 225 IPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLL 284
I C C +MR+DM+ H C+M+ +CP+ +GC +PQ + H ++ +HL
Sbjct: 191 IDCSLGCGARVMRQDMEAHTTGPCEMRPVSCPYALIGCDGPVPQRTMPNHLVENADNHLR 250
Query: 285 YILQKLHRDKPLKVLKNRVEELEKSYFDKLA----EAPDVRSLSFAIKDLEAK 333
+ + + + RVEELE D +A +R++ A+ LE K
Sbjct: 251 MLYEASAK------MSIRVEELETWANDLVANDNTRREGIRAIDTALLALETK 297
>gi|303277571|ref|XP_003058079.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460736|gb|EEH58030.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 411
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 143/371 (38%), Gaps = 47/371 (12%)
Query: 38 IAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETFVAESVILEDPDQA 97
+++ + +A A V T G F + + T++V L K +D +
Sbjct: 50 VSRALVDAIAKAAVFQTAGKPFGDANDLVAKLATDLVAKLMK----------FADDAENG 99
Query: 98 EVSDHP-YDIISDFVDEFALSKRNLFSRVSGWMSSEKREDRIDDFLQEMEISGFWSINRR 156
+ P ++ +++E+ KR+ F S EK+ + ++ Q++ W R
Sbjct: 100 KSGLAPNLADLAAWINEWVTGKRSFFGEFGAMWSKEKQTEAVERVRQDVARGECWPAADR 159
Query: 157 EAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKH 216
E ++ LL D HC F +E EL EH C F CPNEGC A H
Sbjct: 160 ERVSRELLLRYDRGKVAHCEEAFATEDELFEHKKKCAFRPTQCPNEGCMEVHGANVAAAH 219
Query: 217 DSVCPFKIIPCEQKCPDT-LMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
D+ CP KI+ C C T + RR + H C + CPF GC S + ++ H
Sbjct: 220 DAQCPHKIVKCPNACDSTNVTRRALKMHVDLECPRRPVTCPFAPFGCASHVYAGTLRAHM 279
Query: 276 HDDLCSHLLYILQKLHR------DKPLKVLK------------NRVEELEKSYFDKLAEA 317
+ H+ + +++ R KV + +V L K FD A+A
Sbjct: 280 KEHAHDHVADLAKRVGRMSDAAEKTEAKVAEMAVALADVGPNLGKVGNLSKELFDTTAKA 339
Query: 318 PDVR-----------SLSFAIKDLEAKLGPFKED------TVNRYSGEGKVNEEKKINEV 360
V S+ A+ +LE ++ ++D V+R + E N
Sbjct: 340 TIVEKGLLDLEKLVVSMGKALANLEVQVKQQRKDIGIVMTAVDRVAKETAGNSAAIAKLA 399
Query: 361 KPDGEGTINGE 371
PD NG+
Sbjct: 400 SPDAAAGSNGK 410
>gi|255081326|ref|XP_002507885.1| predicted protein [Micromonas sp. RCC299]
gi|226523161|gb|ACO69143.1| predicted protein [Micromonas sp. RCC299]
Length = 378
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 6/223 (2%)
Query: 70 RTEMVEYLTKRSETFVAESVILEDPDQAEVSDHPYDIISDFVDEFALSKRNLFSRVSGWM 129
+T M + +++ + ++E +Q D +S ++E+ KR +F+ ++ W
Sbjct: 59 QTGMKPFANPKAQVGPLSAELVEKLEQGVKPDTILSNLSANINEWTAGKRGMFT-LNFW- 116
Query: 130 SSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELNEHM 189
+ED I ++ W+ A LL D + HC F S +EL H
Sbjct: 117 ----QEDSIASLQADVARGDGWAAADVSRAARTLLLAYDKRGLAHCEEAFASPEELLAHK 172
Query: 190 LHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQ 249
C F + C N GC A HD+ CP K++ C Q C + R + H T C
Sbjct: 173 EGCAFRPVECQNHGCVQVVGANSAGAHDASCPHKLLVCPQGCGADVKRAALRDHMATECD 232
Query: 250 MKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHR 292
MK A CP+ +GC ++ + H + +HL ++ + R
Sbjct: 233 MKPAVCPYKELGCDGSVTAGSVDAHCRECAGTHLKLVVDWVGR 275
>gi|397587056|gb|EJK53794.1| hypothetical protein THAOC_26696, partial [Thalassiosira oceanica]
Length = 945
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 156 REAIAHILLKNVD-FKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLE 214
R +A +++K+VD ++ + HC+ E + E+ L M CPN+ C A +S + +
Sbjct: 332 RTVLARLVIKDVDRYRFQMHCDSCSCREGDRCEYTL------MTCPNDNCTAIYSRKYRD 385
Query: 215 KHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
+HD VC ++ +PC C + R D+ +H C M+ A CP VGC + + I +H
Sbjct: 386 EHDEVCGYRRVPCPSGCGAAVARMDLHKHVRDECPMREAACPLSVVGCTACVRAGDISRH 445
Query: 275 RHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELE----------KSYFDKLAEAPDVRSL 323
+ +H + + ++ + L + + R++ELE + KL D +S
Sbjct: 446 LSEGADAHFVLVANRMMEYQQLFRRMDGRIKELEERNAMLENVLRETAAKLQSKDDAKSA 505
Query: 324 SFAIKDLEAKLG 335
+ +K L+ ++G
Sbjct: 506 AGDVKKLDKRIG 517
>gi|145345968|ref|XP_001417470.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577697|gb|ABO95763.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 368
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 33/214 (15%)
Query: 151 WSINRREAIAHILLKNV-DFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFS 209
W R +A L+++ D + HC E L EH + C F+ + C NEGC A FS
Sbjct: 131 WPEAERHKLAIRLVRDYYDTDFQAHCRKSCVDEDALFEHKISCKFLPVSCSNEGCPASFS 190
Query: 210 AGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQC 269
EKHD+ C +K+I C +C + R +M+ H C M+ CP+ +GCQ +
Sbjct: 191 KHSQEKHDNRCSYKLIDCRLECGRQIARGEMEAHAAGDCAMREVECPYAELGCQHPVRLG 250
Query: 270 MIQQHRHDDLCSHL--LYI-----------LQKL---------HR-------DKPLKVLK 300
+ +H ++ +HL LY L++ HR D L L+
Sbjct: 251 KMSEHLFENAENHLRMLYTAETKVSTRVSALERWAQAVVDDDEHRREGLRAIDTALLTLE 310
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKL 334
+ EL+KS+ + + L +KDLEA +
Sbjct: 311 TKHAELDKSH---VGSKSHITKLESRVKDLEATV 341
>gi|383135652|gb|AFG48846.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
Length = 118
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 25 FHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETF 84
F C+ + E V IAQ L GLA+ACV++T GD+F+TP SVA +R EM+EYL ++SE +
Sbjct: 37 FSCDYYEVEHVRNIAQALLSGLAAACVESTMGDLFKTPASVAANVRKEMIEYLRQQSEVY 96
Query: 85 VAESVIL 91
+ V++
Sbjct: 97 PTQYVMI 103
>gi|361066833|gb|AEW07728.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
gi|383135650|gb|AFG48844.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
gi|383135651|gb|AFG48845.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
gi|383135653|gb|AFG48847.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
gi|383135654|gb|AFG48848.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
gi|383135655|gb|AFG48849.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
gi|383135656|gb|AFG48850.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
gi|383135657|gb|AFG48851.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
gi|383135658|gb|AFG48852.1| Pinus taeda anonymous locus 0_9835_02 genomic sequence
Length = 118
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 25 FHCNLSDTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTKRSETF 84
F C+ + E V IAQ L GLA+ACV++T GD+F+TP SVA +R EM+EYL ++SE +
Sbjct: 37 FSCDYYEVEHVRNIAQALLSGLAAACVESTMGDLFKTPASVAANVRKEMIEYLRQQSEVY 96
Query: 85 VAESVIL 91
+ V++
Sbjct: 97 PTQYVMI 103
>gi|403351710|gb|EJY75352.1| zf-TRAF multi-domain protein [Oxytricha trifallax]
Length = 1479
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDR 242
KE+ H L C + + C N+ CNA L HD C FKII CE +C + + R+++D+
Sbjct: 804 KEMESHKLTCNYRRVYCQNQKCNAVIIYKDLYSHDERCLFKIIECENQCGERVQRQNIDK 863
Query: 243 HCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSH-LLYILQKLHRDKPLKVLKN 301
H C+ +L C +Y +GC+ I + QH H++ H +++I + +++ + LK
Sbjct: 864 H-KEKCENQLIKCAYYDLGCKVEILRKYYVQHLHEEGFDHSIIFIEGQKKKNREIDELKF 922
Query: 302 RVEELEKSY 310
+ L ++Y
Sbjct: 923 DLIHLRQNY 931
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 34/126 (26%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCPDTLM------ 236
E+++H+ C F + CPN K ++KH + CPF+I+ C KC L
Sbjct: 685 EIDKHLKTCPFTLLFCPNNELCGKIIRKEIDKHKNEECPFRIVECLLKCSLMLPLNDMED 744
Query: 237 ----------------------RRDMDRHCITVCQMKLANCP-----FYAVGCQSTIPQC 269
R DMD+H C +++ +CP + GCQ + +
Sbjct: 745 HISSDCPKYQINCKNQCNGLIERGDMDKHLTIDCPLQIVDCPNKGESLFEEGCQIRLKRK 804
Query: 270 MIQQHR 275
++ H+
Sbjct: 805 EMESHK 810
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 25/97 (25%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPC-EQKCPDTLMRRDMDRH---------- 243
+S+ C N+ C G ++KH CPF ++ C + ++R+++D+H
Sbjct: 668 LSIGCINQHCEDVIRKGEIDKHLKTCPFTLLFCPNNELCGKIIRKEIDKHKNEECPFRIV 727
Query: 244 -CITVCQMKL----------ANCPFYAVGCQSTIPQC 269
C+ C + L ++CP Y + C++ QC
Sbjct: 728 ECLLKCSLMLPLNDMEDHISSDCPKYQINCKN---QC 761
>gi|218196516|gb|EEC78943.1| hypothetical protein OsI_19389 [Oryza sativa Indica Group]
Length = 99
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 240 MDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KV 298
MDRHC+TVC M+ CPF GC S+ P+ ++QH + L +HL +L+ +H+ +
Sbjct: 1 MDRHCVTVCPMRPMKCPF---GCDSSFPERNLEQHCSEFLQAHLHKLLKAIHKKGFTDEG 57
Query: 299 LKNRVEELEKSYFD-KLAEAPDVRSLSFAIKDLEAKL 334
LK+ LEK D KLA++ DVRSL+ +K+LEAK+
Sbjct: 58 LKDHALLLEKHDNDGKLAKSRDVRSLTNVVKNLEAKI 94
>gi|224006562|ref|XP_002292241.1| hypothetical protein THAPSDRAFT_263528 [Thalassiosira pseudonana
CCMP1335]
gi|220971883|gb|EED90216.1| hypothetical protein THAPSDRAFT_263528 [Thalassiosira pseudonana
CCMP1335]
Length = 177
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 192 CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMK 251
C F + CPN C FS + ++HD C FK++PC C ++ R ++ H C ++
Sbjct: 1 CAFRLVSCPNTNCPETFSFKYSQQHDEECGFKLLPCPSNCGMSIPRNEVHIHVRDKCVLR 60
Query: 252 LANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
A CP +GC + + + +H ++ H L++ ++
Sbjct: 61 AAECPLACLGCTTVVQAQDVARHLNEHSDQHFLFVANRM 99
>gi|170037692|ref|XP_001846690.1| tnf receptor associated factor [Culex quinquefasciatus]
gi|167880974|gb|EDS44357.1| tnf receptor associated factor [Culex quinquefasciatus]
Length = 486
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPF 257
CP+ C+ +FSA L H + CP +PC Q+C + R D+D H C+ C F
Sbjct: 218 CPH--CSREFSADTLSAHGATCPRSPVPCPQRCDAGPMARADLDSHLRDECKALSVPCSF 275
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAE 316
GC+ P+ +++ H + +HL L + + + + +LKN + +L +Y
Sbjct: 276 KDAGCRFKGPRHLLEAHLESNTSAHLSLMVALSGRQGQQITMLKNAMAKLSTNY------ 329
Query: 317 APDVRSLSFAIKDLEAKL 334
+L + I D AK+
Sbjct: 330 ---TGTLLWKITDWSAKM 344
>gi|308199433|ref|NP_001184047.1| TNF receptor-associated factor 5 [Canis lupus familiaris]
gi|209361186|gb|ACI43177.1| TRAF5 [Canis lupus familiaris]
Length = 558
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 32/180 (17%)
Query: 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGC---------------NAKFS-- 209
V KN CN K + +H+ HC F ++ C NE C + +F
Sbjct: 108 VYCKNAPGCNAKIILGR-YQDHLQHCPFQAVQCSNEDCQEPVLRKDLKEHVSTSCQFREE 166
Query: 210 ----------AGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
HL+ H+ ++CP +PC KC + R ++D H +TVC +CPF
Sbjct: 167 RCLYCKKDVVVIHLQNHEENLCPEYPVPCPNKCSQIIPRTEVDEH-LTVCPEAEQDCPFK 225
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQK-LHRDKPLKVLKNRVEELEKSYFDKLAEA 317
GC + +Q+H H L H+L +L+K L ++ + L +E+ E S +LAE
Sbjct: 226 HYGCTVKDKRGSLQEHEHSALRDHMLLVLEKNLQLEEQISDLYKSLEQKE-SKIQQLAET 284
>gi|157113963|ref|XP_001652160.1| tnf receptor associated factor [Aedes aegypti]
gi|108877524|gb|EAT41749.1| AAEL006649-PA [Aedes aegypti]
Length = 481
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPF 257
CP+ C+ +FSA L H + CP +PC Q+C R D++ H C+ C F
Sbjct: 213 CPH--CSREFSADTLSAHGATCPRSPVPCPQRCDAGPFARADLEGHLRDECKALSVPCTF 270
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAE 316
GC+ P+ +++ H + SHL L + + + + +LKN + +L +Y
Sbjct: 271 KEAGCRFKGPRHLLEAHLESNTSSHLSLMVALSGRQGQQINMLKNAMAKLSTNY------ 324
Query: 317 APDVRSLSFAIKDLEAKL 334
+L + I D AK+
Sbjct: 325 ---TGTLLWKITDWSAKM 339
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 151 WSINRREAIAHILLKNVDFKNEFHCNMKFNSEKE---LNEHM-LHCGFISMICPNEGCNA 206
WS R+ AH+ N + C K S+ + +H+ C IC E CN
Sbjct: 110 WSDELRKLKAHL---NTCKHDAIQCPNKCGSQIPRVMMTDHLAFTCILRRAIC--EFCNV 164
Query: 207 KFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
+F+ LE+H C + I CE KC ++R M H C +L CP
Sbjct: 165 EFTGIGLEEHAGTCSSEPIYCESKCGTRVVRGRMSIHRAKDCAKRLRRCP 214
>gi|432091466|gb|ELK24544.1| TNF receptor-associated factor 5 [Myotis davidii]
Length = 558
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 39/201 (19%)
Query: 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------- 218
V KN CN K + +H+ C F ++ C NE C L++H S
Sbjct: 108 VYCKNAPGCNAKIILGR-YQDHLQQCLFQAVQCSNESCRQPVLRKDLKEHLSADCQFREE 166
Query: 219 --------------------VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
VCP +PC KC + R +MD+H + VC +CPF
Sbjct: 167 KCLYCKKEVVVINLQNHEENVCPEYPVPCPNKCVQVIPRNEMDKH-LAVCPEAEQDCPFK 225
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAP 318
GC ++QH H L H+L IL+K R L+ ++ +L KS K ++
Sbjct: 226 HYGCPVKGKPSNLKQHEHSALRDHMLLILEKNFR------LEEQISDLCKSLERKESQ-- 277
Query: 319 DVRSLSFAIKDLEAKLGPFKE 339
++ L+ +K E + F +
Sbjct: 278 -IQQLAETVKKFEKEFKQFTQ 297
>gi|301118889|ref|XP_002907172.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105684|gb|EEY63736.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2324
Score = 55.8 bits (133), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 161 HILLKNVDFKNEFHCNMKFNS----------EKELNEHMLHCGFISMICPNEGCNAKFSA 210
IL ++ +F +HC + EL+EH + +I ++GC AKF+A
Sbjct: 443 QILFQDREFHLNYHCRKRAIKCRLLCGTTVHHDELDEHESARCSLRIITCDQGCQAKFTA 502
Query: 211 GHLEKHD-SVCPFKIIPCEQK---CPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTI 266
+KH CP +++PC+ K C + +MD H T+C+++ +C + + GC+ I
Sbjct: 503 NFAKKHRLHECPKRMVPCKGKHGGCSALVKYDEMDFHLSTLCELRELSCKWASYGCEEKI 562
Query: 267 PQCMIQQHRHD 277
++ H+
Sbjct: 563 AGVAAGRYIHE 573
>gi|395531313|ref|XP_003767726.1| PREDICTED: TNF receptor-associated factor 5 [Sarcophilus harrisii]
Length = 745
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 159 IAHILLKNVDFKNEFHCNMKFNSEKELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKH- 216
+ L ++V NE C + K+L +H+ LHC F CP C +L+ H
Sbjct: 316 LLQCLFQSVQCSNE--CCQEKVLRKDLKDHLGLHCQFRKETCPY--CKKDIVVMNLQNHK 371
Query: 217 DSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+ +CP ++ C C + R +D H ITVC CP+ GC + +++H +
Sbjct: 372 EKICPEYLVSCPNNCLQIIPRTKVDEH-ITVCPEVEQECPYKHYGCPVKEKRINLKEHEN 430
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
L H+L +L+K R L+ ++ +L K+ +L E+ ++ LS +K E +
Sbjct: 431 SALREHMLLVLEKNSR------LEEQISDLHKNL--ELKES-KIQQLSETVKKFEKEFRQ 481
Query: 337 F 337
F
Sbjct: 482 F 482
>gi|410973582|ref|XP_003993227.1| PREDICTED: TNF receptor-associated factor 6 [Felis catus]
Length = 488
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 25/180 (13%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
ILL+N F + F +++E+ M+ C PNEGC K HLE HD CP
Sbjct: 111 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEIHDQNCP 156
Query: 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCS 281
+ CE C L+R M H C C F GC + + + +H ++ S
Sbjct: 157 LANVICE-YCNTMLIREQMPNHYDLDCPTAPIPCTFSTFGCHVKMQRNHLARHLQENTQS 215
Query: 282 HLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEA-------PDVRSLSFAIKDLEAKL 334
H+ + Q + + L + V + + +D + + P+V++ I+ LE +L
Sbjct: 216 HMRMLAQAV---QSLSLALPPVPQCDMPPYDSSSASRVSTGCHPEVQNFQETIQQLEGRL 272
>gi|412990086|emb|CCO20728.1| predicted protein [Bathycoccus prasinos]
Length = 385
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 192 CGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQM 250
C ++ + C E C+ +FS ++HD VCP + C KC L R +D H + C+
Sbjct: 192 CEWVEVKC--ERCDERFSKKFRKRHDEKVCPLFEVECPLKCGTVLKRNQVDLHAMNRCEN 249
Query: 251 KLANCPFYAVGCQS---TIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELE 307
+ CP+ + C S I + H D+ +HL + QKL L VL++ LE
Sbjct: 250 RAFECPYEKLDCCSPTEPITKKTFDAHVRDNCANHLFTVTQKLF--PKLSVLEHEHVRLE 307
Query: 308 KSYFD 312
K D
Sbjct: 308 KQLHD 312
>gi|443720364|gb|ELU10162.1| hypothetical protein CAPTEDRAFT_167590 [Capitella teleta]
Length = 502
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANC 255
C NEGC F + E H+ C F+++PC CP+ L RR +D H +C +++ C
Sbjct: 99 CSNEGCTQTFELANSESHNEKCLFRLVPCPNGCPNLLRRRSLDNHMANLCLLRVKVC 155
>gi|312374877|gb|EFR22349.1| hypothetical protein AND_15405 [Anopheles darlingi]
Length = 903
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPF 257
CP+ C+ +FSA + H + CP +PC Q+C R D++ H C+ C F
Sbjct: 629 CPH--CSREFSADTMAAHGATCPRSPVPCPQRCDVGPFARADLEAHLRDECKALTVPCTF 686
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKL 314
GC+ P+ +++ H + +HL L + + + + +LK+ + +L +Y L
Sbjct: 687 KEAGCRFKGPRHLLEAHLEANTSAHLSLMVALSGRQGQQINMLKSAMAKLSINYTGTL 744
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 185 LNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+ +H+ C IC E CN +F+ LE+H C + I CE KC ++R M H
Sbjct: 560 MTDHLAFTCILRRAIC--EFCNVEFTGLGLEEHAGTCTAEPIYCESKCGTRVLRGRMSIH 617
Query: 244 CITVCQMKLANCP 256
C +L CP
Sbjct: 618 RAKDCAKRLRRCP 630
>gi|30580619|sp|P70191.1|TRAF5_MOUSE RecName: Full=TNF receptor-associated factor 5
gi|1549146|dbj|BAA11942.1| TRAF5 [Mus musculus]
gi|15215207|gb|AAH12702.1| TNF receptor-associated factor 5 [Mus musculus]
gi|74194859|dbj|BAE26019.1| unnamed protein product [Mus musculus]
gi|148681024|gb|EDL12971.1| Tnf receptor-associated factor 5 [Mus musculus]
Length = 558
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV-- 219
+L +V KN CN + + +H+ HC F ++ CPNE C +++H S
Sbjct: 103 VLNLHVYCKNAPGCNARIILGR-FQDHLQHCSFQAVPCPNESCREAMLRKDVKEHLSAYC 161
Query: 220 --------------------------CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
CP + C +C T+ R ++ H +TVC
Sbjct: 162 RFREEKCLYCKRDIVVTNLQDHEENSCPAYPVSCPNRCVQTIPRARVNEH-LTVCPEAEQ 220
Query: 254 NCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDK 313
+CPF GC + + +H L H+L +L+K ++ L+ R+ +L +S K
Sbjct: 221 DCPFKHYGCTVKGKRGNLLEHERAALQDHMLLVLEKNYQ------LEQRISDLYQSLEQK 274
Query: 314 LAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ ++ L+ +K E +L F +
Sbjct: 275 ESK---IQQLAETVKKFEKELKQFTQ 297
>gi|6755867|ref|NP_035763.1| TNF receptor-associated factor 5 [Mus musculus]
gi|1469893|dbj|BAA11218.1| TRAF5 [Mus musculus]
Length = 558
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV-- 219
+L +V KN CN + + +H+ HC F ++ CPNE C +++H S
Sbjct: 103 VLNLHVYCKNAPGCNARIILGR-FQDHLQHCSFQAVPCPNESCREAMLRKDVKEHLSAYC 161
Query: 220 --------------------------CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
CP + C +C T+ R ++ H +TVC
Sbjct: 162 RFREEKCLYCKRDIVVTNLQDHEENSCPAYPVSCPNRCVQTIPRARVNEH-LTVCPEAEQ 220
Query: 254 NCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDK 313
+CPF GC + + +H L H+L +L+K ++ L+ R+ +L +S K
Sbjct: 221 DCPFKHYGCTVKGKRGNLLEHERAALQDHMLLVLEKNYQ------LEQRISDLYQSLEQK 274
Query: 314 LAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ ++ L+ +K E +L F +
Sbjct: 275 ESK---IQQLAETVKKFEKELKQFTQ 297
>gi|354472772|ref|XP_003498611.1| PREDICTED: TNF receptor-associated factor 5 [Cricetulus griseus]
gi|344246508|gb|EGW02612.1| TNF receptor-associated factor 5 [Cricetulus griseus]
Length = 558
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 29/133 (21%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------------------------- 218
+H+ HC F ++ CPNE C L++H S
Sbjct: 125 FQDHLQHCSFQAVPCPNESCREAMLRKDLKEHLSAYCQFREERCLYCKRDVVVTDLQDHE 184
Query: 219 --VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+CP + C KC T+ R +++ H + VC +CPF GC + +Q+H
Sbjct: 185 ENLCPAYPVSCPNKCLRTIPRTEVNEH-LAVCPEAEQDCPFQHYGCTVKGKRGNLQEHEQ 243
Query: 277 DDLCSHLLYILQK 289
L H+L +L+K
Sbjct: 244 AALRDHMLLVLEK 256
>gi|426240118|ref|XP_004013961.1| PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 5
[Ovis aries]
Length = 562
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 30/148 (20%)
Query: 170 KNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS----------- 218
KN CN K + +H+ HC F + C NE C L++H S
Sbjct: 111 KNAPRCNAKITLGR-YQDHLQHCPFQPVQCSNENCREPVLRKDLKEHLSAYCQFREEKCL 169
Query: 219 -----------------VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
+CP + C KC T+ R ++D H + VC +CPF G
Sbjct: 170 YCKKDVVVINLQNHEENLCPAYPVSCPNKCLQTIPRTEVDEH-LAVCPEAEQDCPFKNYG 228
Query: 262 CQSTIPQCMIQQHRHDDLCSHLLYILQK 289
C + +Q+H H L H+L +L+K
Sbjct: 229 CTVKDKRGNLQEHEHLALRDHMLLVLEK 256
>gi|119114269|ref|XP_319165.3| AGAP010017-PA [Anopheles gambiae str. PEST]
gi|116118335|gb|EAA43586.3| AGAP010017-PA [Anopheles gambiae str. PEST]
Length = 483
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPF 257
CP+ C +F A L H + CP IPC Q+C R D+D H C+ C F
Sbjct: 211 CPH--CGREFCADTLAAHGATCPRSPIPCPQRCDAGPFARADLDAHLRDECKALTVPCTF 268
Query: 258 YAVGCQSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKL 314
GC+ P+ +++ H + +HL L + + + + +LK+ + +L +Y L
Sbjct: 269 KEAGCRFKGPRHLLEAHLEANTSAHLSLMVALSGRQGQQINMLKSAMAKLSTNYTGTL 326
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 151 WSINRREAIAHILLKNVDFKNEFHCNMKFNSEKE---LNEHM-LHCGFISMICPNEGCNA 206
WS R+ AH+ N + C K S+ + +H+ C IC E CN
Sbjct: 108 WSDELRKLKAHL---NTCKHDAIQCPNKCGSQIPRVMMTDHLAFTCILRRAIC--EFCNV 162
Query: 207 KFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
+F+ LE+H C + I CE KC ++R M H C +L CP
Sbjct: 163 EFTGIGLEEHAGTCSSEPIYCESKCGTRVLRGRMSIHRAKDCAKRLRRCP 212
>gi|159470431|ref|XP_001693363.1| hypothetical protein CHLREDRAFT_147578 [Chlamydomonas reinhardtii]
gi|158277621|gb|EDP03389.1| predicted protein [Chlamydomonas reinhardtii]
Length = 963
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 134 REDRIDDFLQEMEISGFWSINRREAIAHILLKNVD-FKNEFHCNM---KFNSEKELNEHM 189
RE R+D LQ E + + IN H L+ +D HC + S+ L +H
Sbjct: 34 RETRVDCRLQTPESA--YLIN------HALMAVMDVLGMGGHCRACDEECGSQAALLQHY 85
Query: 190 L-HCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVC 248
L C + C GC+ + H+ CP C Q C + R+D+ RH +T C
Sbjct: 86 LKRCPHAVVRCRFRGCSGWHRRSEAQAHEDTCPIGRAACSQ-CGTWVDRQDVLRHMVTTC 144
Query: 249 QMKLANCPFYAVGCQSTIPQCM--IQQHRH 276
+M++ NC C+ +P + +++H+H
Sbjct: 145 RMRVVNCVLCKHSCR--LPDMLRHLREHQH 172
>gi|431915712|gb|ELK16045.1| TNF receptor-associated factor 6 [Pteropus alecto]
Length = 571
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 32/154 (20%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN+GC K HLE HD CP + CE C L+R M H C
Sbjct: 214 LTVKCPNKGCLHKMELRHLEIHDQNCPLANVICE-YCNTMLIREQMPNHYDLDCPTAPIP 272
Query: 255 CPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKL 314
C F GC +Q++H L ++E +S+ L
Sbjct: 273 CTFSTFGCHEK---------------------MQRIH-------LARHLQENTQSHMRML 304
Query: 315 AEAPDVRSLSFAIKDLEAK-LGPFKEDTVNRYSG 347
A+A V+SL+ A+ + + + P+ ++ R SG
Sbjct: 305 AQA--VQSLNLALAPVPQRDMLPYDSASLPRVSG 336
>gi|194766261|ref|XP_001965243.1| GF21137 [Drosophila ananassae]
gi|190617853|gb|EDV33377.1| GF21137 [Drosophila ananassae]
Length = 488
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ +C F GC
Sbjct: 223 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIARGELEAHLRDECQSLAVSCSFKEAGC 282
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 283 RFKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 333
Query: 322 SLSFAIKDLEAKLG 335
+L + I D AK+
Sbjct: 334 TLLWKITDWSAKMA 347
>gi|195342435|ref|XP_002037806.1| GM18466 [Drosophila sechellia]
gi|194132656|gb|EDW54224.1| GM18466 [Drosophila sechellia]
Length = 520
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ +C F GC
Sbjct: 255 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGC 314
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 315 RFKGPRQMLETHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 365
Query: 322 SLSFAIKDLEAKLG 335
+L + I D AK+
Sbjct: 366 TLLWKITDWSAKMA 379
>gi|407703744|ref|YP_006827329.1| pseudouridine synthase [Bacillus thuringiensis MC28]
gi|407381429|gb|AFU11930.1| erpL protein [Bacillus thuringiensis MC28]
Length = 409
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 350 KVNEEKKINEVK-PDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQE 408
K E+KK+ E K + + + + E+ K+ K E++K+ + K E K EQ+
Sbjct: 235 KAEEQKKVEEQKKAEEQKKVEEQKKAEEQKKVEEQKKAEEQKKVEEQKKAEEQKKVEEQK 294
Query: 409 K-DSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANE 467
K + V+E K E +KV E+ + +++ V + +G K +V E++KA E
Sbjct: 295 KAEEQKKVEEQKKAE---EQKKVEEQKKAEEQKKVEEQKKAEGQK-----KVEEQKKAEE 346
Query: 468 PGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEG 527
KV + +KV E+ KA + K ++ +A E +KV E++ E K +V E++K+ +
Sbjct: 347 QKKVEEQKKVEEQKKAEEQKKAEEQKKAEEQKKVEEQKKAEEQK----KVEEQKKLEEQK 402
Query: 528 KVN 530
K
Sbjct: 403 KAE 405
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 347 GEGKVNEEKKINEVKP-DGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGN 405
G+ KV E+KK E K + + + + + E+ K K E++K + K E K
Sbjct: 190 GQKKVEEQKKAEEQKKVEEQKKVEEQKKVEEQKKAEEQKKAEEQKKAEEQKKVEEQKKAE 249
Query: 406 EQEK-DSDGDVKEGKFTEGKNNG---RKVSEEDRIHDEQNVNREGTID-GGKINNETRVN 460
EQ+K + +E K E + +KV E+ + +++ V + + K+ + +
Sbjct: 250 EQKKVEEQKKAEEQKKVEEQKKAEEQKKVEEQKKAEEQKKVEEQKKAEEQKKVEEQKKAE 309
Query: 461 EEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEE 520
E++K E K + +KV E+ KA KV ++ +A E +KV E++ + E K + E
Sbjct: 310 EQKKVEEQKKAEEQKKVEEQKKAEGQKKVEEQKKAEEQKKVEEQKKVEEQKKAEEQKKAE 369
Query: 521 EKINAE 526
E+ AE
Sbjct: 370 EQKKAE 375
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 350 KVNEEKKINEVK-PDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQE 408
K E+KK+ E K + + + + E+ K+ K E++K+ + K E K EQ+
Sbjct: 259 KAEEQKKVEEQKKAEEQKKVEEQKKAEEQKKVEEQKKAEEQKKVEEQKKAEEQKKVEEQK 318
Query: 409 K-DSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANE 467
K + V+E K EG +KV E+ + +++ V + ++ K E + EEQK E
Sbjct: 319 KAEEQKKVEEQKKAEG---QKKVEEQKKAEEQKKVEEQKKVEEQKKAEEQKKAEEQKKAE 375
Query: 468 PGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERN 506
K KV E+ KA + KV ++ + E +K E++
Sbjct: 376 EQK-----KVEEQKKAEEQKKVEEQKKLEEQKKAEEQKK 409
>gi|432113849|gb|ELK35961.1| TNF receptor-associated factor 6 [Myotis davidii]
Length = 461
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CPNEGC K HLE HD CP + CE C L+R M H C C F
Sbjct: 112 CPNEGCMHKMELRHLE-HDQSCPLANVICE-YCSTMLIREQMPNHFDLDCPTAPIPCTFS 169
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
+ GC + + + +H ++ SH+ + Q +
Sbjct: 170 SFGCHEKMQRIHLARHLQENTQSHMRMLAQAV 201
>gi|194856022|ref|XP_001968660.1| GG24997 [Drosophila erecta]
gi|190660527|gb|EDV57719.1| GG24997 [Drosophila erecta]
Length = 486
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ +C F GC
Sbjct: 221 CQREFSADTLPLHTAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGC 280
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 281 RFKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 331
Query: 322 SLSFAIKDLEAKLG 335
+L + I D AK+
Sbjct: 332 TLLWKITDWSAKMA 345
>gi|17137644|ref|NP_477416.1| TNF-receptor-associated factor 4, isoform A [Drosophila
melanogaster]
gi|4959432|gb|AAD34346.1|AF119794_1 TNF-receptor-associated factor 1 [Drosophila melanogaster]
gi|7295719|gb|AAF51024.1| TNF-receptor-associated factor 4, isoform A [Drosophila
melanogaster]
gi|20151571|gb|AAM11145.1| LD20987p [Drosophila melanogaster]
gi|220943150|gb|ACL84118.1| Traf4-PA [synthetic construct]
gi|220953234|gb|ACL89160.1| Traf4-PA [synthetic construct]
Length = 486
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ +C F GC
Sbjct: 221 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGC 280
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 281 RFKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 331
Query: 322 SLSFAIKDLEAKLG 335
+L + I D AK+
Sbjct: 332 TLLWKITDWSAKMA 345
>gi|392332918|ref|XP_003752735.1| PREDICTED: TNF receptor-associated factor 5-like [Rattus
norvegicus]
Length = 558
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 39/206 (18%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV-- 219
+L +V KN CN + + +H+ HC F ++ CPN+ C +++H S
Sbjct: 103 VLNLHVYCKNAPGCNARIILGR-FQDHLQHCSFQAVPCPNQSCREAMLRKDVKEHLSAYC 161
Query: 220 --------------------------CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
CP + C KC T+ R + H +TVC
Sbjct: 162 RFREEKCLYCKRDIVVTNLQDHEENSCPAYPVSCPNKCVQTIPRAGVKEH-LTVCPEAEQ 220
Query: 254 NCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDK 313
+CPF GC + +Q+H L H+L +L+K + L+ ++ +L +S K
Sbjct: 221 DCPFKHYGCTVKGKRGNLQEHERAALQDHMLLVLEKNFQ------LEQQISDLYQSLEQK 274
Query: 314 LAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ ++ L+ +K E +L F +
Sbjct: 275 ESK---IQQLAGTVKKFEKELKQFTQ 297
>gi|291402447|ref|XP_002717577.1| PREDICTED: TNF receptor-associated factor 5 [Oryctolagus cuniculus]
Length = 558
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
++LNEH+ +C F C C L+ H+ ++CP + C KC + R ++
Sbjct: 151 RDLNEHLSAYCQFREEKCLY--CKKDVVVMDLQNHEENLCPEYPVSCPNKCLQIIPRTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
+RH + VC +CPF GC + +Q+H H L H+L +L+K R L+
Sbjct: 209 NRH-LAVCPEAEQDCPFKQYGCTVKEKRGSLQEHEHSALREHMLLVLEKNFR------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ +K E + F +
Sbjct: 262 EQISDLCKSLEQKESK---IQQLAETVKKFEKEFKQFAQ 297
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCEQ-KCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G ++H C F+++ C C + ++RRD++ H CQ +
Sbjct: 106 LHVYCKNAPGCNAKVILGRYQEHLQQCLFQVVQCSHDSCQEPVLRRDLNEHLSAYCQFRE 165
Query: 253 ANCPF 257
C +
Sbjct: 166 EKCLY 170
>gi|407971937|gb|AFU52971.1| tumor necrosis factor receptor-associated factor 6 [Mizuhopecten
yessoensis]
Length = 657
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 199 CPN--EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
CPN +GC+ + L+KH + C F +PC +C +R+D+ H +C ++L CP
Sbjct: 161 CPNHKDGCDTQVVLKQLKKHLNTCEFAFLPCPNRCSHMPLRKDLTNHLEEMCPLRLLKCP 220
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 183 KELNEHMLHCGFISMICPNE--------------------------GCNAKFSAGHLEKH 216
K+L +H+ C F + CPN C+ + A +L+KH
Sbjct: 175 KQLKKHLNTCEFAFLPCPNRCSHMPLRKDLTNHLEEMCPLRLLKCPTCHIELQAEYLQKH 234
Query: 217 DSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTI 266
CP + C+ + L+R + RH C + +C F +GC+ T+
Sbjct: 235 VDSCPLASVKCQFCGNEGLIREQLQRHLNNDCPKAVIDCEFKELGCKETV 284
>gi|442625853|ref|NP_001097080.2| TNF-receptor-associated factor 4, isoform E [Drosophila
melanogaster]
gi|440213304|gb|ABV53619.2| TNF-receptor-associated factor 4, isoform E [Drosophila
melanogaster]
Length = 477
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ +C F GC
Sbjct: 212 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGC 271
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 272 RFKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 322
Query: 322 SLSFAIKDLEAKLG 335
+L + I D AK+
Sbjct: 323 TLLWKITDWSAKMA 336
>gi|195576499|ref|XP_002078113.1| GD23279 [Drosophila simulans]
gi|194190122|gb|EDX03698.1| GD23279 [Drosophila simulans]
Length = 483
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ +C F GC
Sbjct: 218 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGC 277
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 278 RFKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 328
Query: 322 SLSFAIKDLEAKLG 335
+L + I D AK+
Sbjct: 329 TLLWKITDWSAKMA 342
>gi|45383686|ref|NP_989550.1| TNF receptor-associated factor 5 [Gallus gallus]
gi|27923036|dbj|BAC55959.1| tumor necrosis factor receptor associated factor-5 [Gallus gallus]
gi|53133404|emb|CAG32031.1| hypothetical protein RCJMB04_16f1 [Gallus gallus]
Length = 557
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHM-LHCGFISMICPNEGCNAKFSAGHLE 214
+E + L ++V N+ C+ K+L +H+ HC F +C + CN +++
Sbjct: 125 QEHLQQCLFESVQCTNDGCCDQIL--RKDLKDHLSQHCKFREEMC--QYCNKYVVLINIK 180
Query: 215 KHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
H+ + CP +PC Q C ++++++++H TVC +CP+ GC + + + +
Sbjct: 181 NHEENDCPDYPMPCLQNCSQIILKKEIEKH-HTVCPETEVDCPYKQYGCLIKVKRGKLAE 239
Query: 274 HRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSY------FDKLAEA 317
H + L H+L IL K R L+ ++ +L KS +LAEA
Sbjct: 240 HENGALREHMLQILDKNSR------LEEQISDLYKSLECKEIKIQQLAEA 283
>gi|198475265|ref|XP_001356990.2| GA15869 [Drosophila pseudoobscura pseudoobscura]
gi|198138744|gb|EAL34056.2| GA15869 [Drosophila pseudoobscura pseudoobscura]
Length = 493
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ C F GC
Sbjct: 228 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIARGELEAHLRDECQSLAVACSFKEAGC 287
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 288 RFKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 338
Query: 322 SLSFAIKDLEAKL 334
+L + I D AK+
Sbjct: 339 TLLWKITDWSAKM 351
>gi|85687488|gb|ABC73694.1| TRAF6 [Azumapecten farreri]
Length = 655
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 199 CPN--EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
CPN +GC+ + L+KH C F +PC +C +R+D+ H +C ++L CP
Sbjct: 159 CPNHKDGCDTQVVLKQLQKHLDSCEFSFLPCPNRCGHIPLRKDLANHLEEMCPLRLVKCP 218
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 26/118 (22%)
Query: 183 KELNEHMLHCGFISMICPNE--------------------------GCNAKFSAGHLEKH 216
K+L +H+ C F + CPN C+ + A +++KH
Sbjct: 173 KQLQKHLDSCEFSFLPCPNRCGHIPLRKDLANHLEEMCPLRLVKCPTCHIELQAEYVQKH 232
Query: 217 DSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
CP + C+ + L+R + RH C + +C F +GC+ + + + +H
Sbjct: 233 VDSCPMAHVKCQFCGNEGLIREQLQRHLNNDCPKAVIDCEFKELGCKEMVERQAMAKH 290
>gi|195471240|ref|XP_002087913.1| Traf1 [Drosophila yakuba]
gi|194174014|gb|EDW87625.1| Traf1 [Drosophila yakuba]
Length = 506
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ +C F GC
Sbjct: 241 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGC 300
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M++ H + HL L + + + +++LK+ V +L +Y
Sbjct: 301 RFKGPRQMLEAHLESNAAVHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 351
Query: 322 SLSFAIKDLEAKLG 335
+L + I D AK+
Sbjct: 352 TLLWKITDWSAKMA 365
>gi|426368015|ref|XP_004051013.1| PREDICTED: TNF receptor-associated factor 6 [Gorilla gorilla
gorilla]
Length = 471
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 17/132 (12%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEK--HDSV 219
ILL+N F + F +++E+ M+ C PNEGC K HLE HD
Sbjct: 111 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEMQIHDQN 156
Query: 220 CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDL 279
CP + CE C L+R M H C C F GC + + + +H ++
Sbjct: 157 CPLANVICE-YCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENT 215
Query: 280 CSHLLYILQKLH 291
SH+ + Q +H
Sbjct: 216 QSHMRMLAQAVH 227
>gi|348567963|ref|XP_003469768.1| PREDICTED: TNF receptor-associated factor 4-like [Cavia porcellus]
Length = 470
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P CN +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCNKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H D + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEDSVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C + ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSYNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCTY 197
>gi|147901683|ref|NP_001086538.1| TNF receptor-associated factor 4 [Xenopus laevis]
gi|49899052|gb|AAH76768.1| MGC83213 protein [Xenopus laevis]
Length = 470
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 185 LNEH-MLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDR 242
L++H ++ C + CP CN +F ++ H CP PC +C ++ R D+
Sbjct: 180 LSQHSLVECPKRTQPCPY--CNKEFVFDTIQSHQYQCPRYPTPCPNQCGVSSIAREDLSS 237
Query: 243 HCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKN 301
H C L CPF GC+ P+ + +H +++ +HL + + R + + L+
Sbjct: 238 HIKESCSSALVLCPFKESGCKHRSPKITMSRHLEENMRAHLSMMSSLVSRQRQEILELRK 297
Query: 302 RVEELEKS 309
+VEEL S
Sbjct: 298 QVEELSVS 305
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 151 WSINRREAIAHILLKNVDFKNEFHCNMKFNSE---KELNEHMLH-CGFISMICPNEGCNA 206
WS ++ H+ N+ N C + +++ ++L EHM H C + C E C
Sbjct: 92 WSGQLKQLQTHL---NICAFNVIPCPNRCSTKLIRRDLPEHMQHDCPKRKVRC--EFCGT 146
Query: 207 KFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
F+ E+H CP + + CE KC +MRR + +H + C + CP+
Sbjct: 147 DFTGEAYEEHQGCCPQESVYCENKCGARMMRRVLSQHSLVECPKRTQPCPY 197
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
EGC L+ H ++C F +IPC +C L+RRD+ H C + C F
Sbjct: 88 EGCRWSGQLKQLQTHLNICAFNVIPCPNRCSTKLIRRDLPEHMQHDCPKRKVRCEF 143
>gi|326915231|ref|XP_003203923.1| PREDICTED: TNF receptor-associated factor 5-like [Meleagris
gallopavo]
Length = 561
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHM-LHCGFISMICPNEGCNAKFSAGHLE 214
+E + L ++V N+ C+ K+L +H+ HC F +C + CN +++
Sbjct: 129 QEHLQQCLFESVQCTNDGCCDQIL--RKDLKDHLNQHCKFREEMC--QFCNKYVVLINIK 184
Query: 215 KHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
H+ + CP +PC Q C ++++++++H TVC +CP+ GC + + + +
Sbjct: 185 NHEENDCPDYPMPCLQNCSQIILKKEIEKH-HTVCPETEVDCPYKQYGCLIKVKRGKLTE 243
Query: 274 HRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSY------FDKLAEA 317
H + L H+L IL K R L+ ++ +L KS +LAEA
Sbjct: 244 HENGALREHMLQILDKNSR------LEEQISDLYKSLECKEIKIQQLAEA 287
>gi|5714381|gb|AAD47894.1|AF079837_1 TRAF1 [Drosophila melanogaster]
gi|10716152|gb|AAG21891.1|AF111422_1 TRAF1 [Drosophila melanogaster]
Length = 412
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H CQ +C F GC
Sbjct: 147 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIPRGELEAHLRDECQSLAVSCSFKEAGC 206
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 207 RFKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 257
Query: 322 SLSFAIKDLEAKLG 335
+L + I D AK+
Sbjct: 258 TLLWKITDWSAKMA 271
>gi|444518340|gb|ELV12102.1| Serine/threonine-protein kinase Nek8 [Tupaia chinensis]
Length = 1143
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 867 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLQGHLKDSCSTALVLCPFK 926
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 927 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 975
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 761 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 818
Query: 262 C 262
C
Sbjct: 819 C 819
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C K S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 790 CPAKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 846
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 847 RMMRRLLAQHATSECPKRTQPCTY 870
>gi|195401349|ref|XP_002059276.1| GJ16121 [Drosophila virilis]
gi|194156150|gb|EDW71334.1| GJ16121 [Drosophila virilis]
Length = 493
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L+ H + CP + C Q+C + R +++ H CQ C F GC
Sbjct: 228 CQREFSADTLQLHAAQCPRTPLACPQRCDAGPIARGELEAHLRDECQSLALACSFKEAGC 287
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ +++ H +HL L + + + +++LK+ V +L +Y
Sbjct: 288 RFKGPRQLLEAHLESSAAAHLSLMVALSTRQGQQIQMLKSAVSKLSINY---------TG 338
Query: 322 SLSFAIKDLEAKL 334
+L + I D AK+
Sbjct: 339 TLLWKITDWSAKM 351
>gi|330805162|ref|XP_003290555.1| hypothetical protein DICPUDRAFT_37582 [Dictyostelium purpureum]
gi|325079301|gb|EGC32907.1| hypothetical protein DICPUDRAFT_37582 [Dictyostelium purpureum]
Length = 423
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 49/191 (25%)
Query: 184 ELNEHMLHCGFISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-------------- 228
++ H+ C + + C N C AKF H EKH+ C + II CE
Sbjct: 121 QIETHLAQCEYGFIGCKNSIECKAKFRKNHQEKHEEQCQYSIINCEHCEEPVVKDKYAKH 180
Query: 229 ------------QKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+ C + RRD+ H C+ + +C + GC I +C + H
Sbjct: 181 LEDDCNVVSLECEHCHNKYGRRDLLSHIRNECKEVVIDCIYKDGGCNKRIKRCDLPTHLK 240
Query: 277 DDLCSHLLYILQKL---HR------DKPLKVLKNRVEELEKSYFDKLAEAPDVRSL---S 324
++ ++ ++ +Q L HR D+ +K LKN ELEK DV S S
Sbjct: 241 EN--NNHIFFMQTLINKHRIETEESDRVIKKLKNDYSELEKR--------VDVNSRYRGS 290
Query: 325 FAIKDLEAKLG 335
+ I++ E+KL
Sbjct: 291 WTIENWESKLA 301
>gi|348526678|ref|XP_003450846.1| PREDICTED: TNF receptor-associated factor 6-like [Oreochromis
niloticus]
Length = 571
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 37/151 (24%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV----------------------- 219
+ L +H++HC F ++ CP C HLE+H +V
Sbjct: 153 RHLEDHLVHCEFATVPCPQ--CQQSVKKSHLEEHITVQCQKRPMSCPDCVACFLYEEREL 210
Query: 220 ----CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
CPF + C Q C L+R M+ HC T C C F GC+ + + + QH
Sbjct: 211 HQQQCPFASVKC-QYCELELVRDQMESHCDTDCPKAPIACNFSIFGCKERMQRHNLAQHM 269
Query: 276 HDDLCSHLLYILQKLH-------RDKPLKVL 299
+ H+ Y+ + L KPL+ L
Sbjct: 270 QEFTQMHMRYMAEFLRGLSLNGTTPKPLRTL 300
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN GC K HLE H C F +PC Q C ++ + ++ H CQ + +
Sbjct: 137 LTVRCPNSGCAEKMELRHLEDHLVHCEFATVPCPQ-CQQSVKKSHLEEHITVQCQKRPMS 195
Query: 255 CP 256
CP
Sbjct: 196 CP 197
>gi|52346054|ref|NP_001005074.1| TNF receptor-associated factor 4 [Xenopus (Silurana) tropicalis]
gi|49899984|gb|AAH76992.1| TNF receptor-associated factor 4 [Xenopus (Silurana) tropicalis]
Length = 470
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 185 LNEH-MLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDR 242
L++H ++ C + CP CN +F ++ H CP PC +C ++ R D+
Sbjct: 180 LSQHSLVECPKRTQPCPY--CNKEFVFDTIQSHQYQCPRYPTPCPNQCGIASIAREDLSN 237
Query: 243 HCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKN 301
H C L CPF GC+ P+ I +H +++ +HL + + R + + L+
Sbjct: 238 HLKDSCSSALVLCPFKDSGCKHRGPKITISRHLEENMRAHLSMMSSLVSRQRQEILELRK 297
Query: 302 RVEELEKS 309
+VEEL S
Sbjct: 298 QVEELSVS 305
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 151 WSINRREAIAHILLKNVDFKNEFHCNMKFNSE---KELNEHMLH-CGFISMICPNEGCNA 206
WS ++ H+ N+ N C + +++ ++L EHM H C + C E C A
Sbjct: 92 WSGQLKQLQPHL---NICAFNVIPCPNRCSTKLIRRDLPEHMQHDCPKRKVRC--EFCGA 146
Query: 207 KFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
F+ E H CP + + CE KC +MRR + +H + C + CP+
Sbjct: 147 DFTGEAYEDHQGCCPQESVYCENKCGARMMRRVLSQHSLVECPKRTQPCPY 197
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
EGC L+ H ++C F +IPC +C L+RRD+ H C + C F
Sbjct: 88 EGCRWSGQLKQLQPHLNICAFNVIPCPNRCSTKLIRRDLPEHMQHDCPKRKVRCEF 143
>gi|119946441|ref|YP_944121.1| hypothetical protein Ping_2816 [Psychromonas ingrahamii 37]
gi|119865045|gb|ABM04522.1| protein containing tetratricopeptide (TPR) repeat [Psychromonas
ingrahamii 37]
Length = 657
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 79/139 (56%), Gaps = 13/139 (9%)
Query: 375 SEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEED 434
SE+ K + K NE++K S + K NE K +EQ+K+S+ + KNN ++ + E
Sbjct: 466 SEQQKNSEQQKNNEQQKNSEQQKNNEQQKNSEQQKNSE---------QQKNNEQQKNNEQ 516
Query: 435 RIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVR 494
+ ++EQ N E K N + + NE+QK NE K + +K SE+ K N+ K +++ +
Sbjct: 517 QKNNEQQKNNEQQ----KNNEQQKNNEQQKNNEQQKNNEQQKNSEQQKNNEQQKNSEQQK 572
Query: 495 ASEGRKVSEERNINEGKTN 513
+E +K +E++ NE +TN
Sbjct: 573 NNEQQKNNEQQKNNEQQTN 591
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 8/151 (5%)
Query: 346 SGEGKVNEEKKINEVKPDGEGTINGEVNI-SEEGKINATDKVNEKEKISNKSKPNEGGKG 404
S + K NE++K +E + + E N E SE+ K N K NE++K + + K NE K
Sbjct: 472 SEQQKNNEQQKNSEQQKNNEQQKNSEQQKNSEQQKNNEQQKNNEQQKNNEQQKNNEQQKN 531
Query: 405 NEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQK 464
NEQ+K+++ ++ + KNN ++ + E + ++EQ N E K N + + NE+QK
Sbjct: 532 NEQQKNNE---QQKNNEQQKNNEQQKNSEQQKNNEQQKNSEQQ----KNNEQQKNNEQQK 584
Query: 465 ANEPGKVTKGEKVSEEGKANDTGKVNKEVRA 495
NE K + ++E ++ + +VN+E+ A
Sbjct: 585 NNEQQTNDKQQMTAKEVQSTEQPEVNQELEA 615
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 14/145 (9%)
Query: 389 KEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTI 448
K++ S + K +E K NEQ+K+S+ + KNN ++ + E + + EQ N E
Sbjct: 462 KQEDSEQQKNSEQQKNNEQQKNSE---------QQKNNEQQKNSEQQKNSEQQKNNEQQ- 511
Query: 449 DGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSE-ERNI 507
K N + + NE+QK NE K + +K +E+ K N+ K N++ + SE +K +E ++N
Sbjct: 512 ---KNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNNEQQKNSEQQKNNEQQKNS 568
Query: 508 NEGKTNGVRVNEEEKINAEGKVNGR 532
+ K N + N E++ N E + N +
Sbjct: 569 EQQKNNEQQKNNEQQKNNEQQTNDK 593
>gi|431915889|gb|ELK16143.1| TNF receptor-associated factor 5 [Pteropus alecto]
Length = 558
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 30/151 (19%)
Query: 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------- 218
V KN CN K + +H+ C F ++ C NE C L++H S
Sbjct: 108 VYCKNAPGCNAKIILGR-YQDHLQQCLFQAVQCSNENCREPVLRKDLKEHLSADCQFREE 166
Query: 219 --------------------VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
+CP + C KC + R ++D H + VC +CPF
Sbjct: 167 KCLYCKKDVVVINLQNHEENLCPEYPVSCPNKCLQIISRTEVDEH-LAVCPEAKQDCPFK 225
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
GC + +QQH H L H+L +L+K
Sbjct: 226 HYGCTVKDKRGKLQQHEHSALRDHMLLVLEK 256
>gi|389889249|gb|AFL03408.1| tumor necrosis factor receptor-associated factor 3 [Pinctada
fucata]
Length = 540
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 164 LKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-VCPF 222
+ V N H S K+++EH+ C + C + CN + ++H++ CP
Sbjct: 95 FRPVPCPNYLHGCEVIISYKDVDEHLKECPYRPYRC--QFCNQEVPLALKQQHETETCPR 152
Query: 223 KIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCS 281
IPC +C + L R +++ H IT C + C +++VGC +QQH DD
Sbjct: 153 IPIPCRYECGINPLPREELEAHLIT-CPKRPQRCRYHSVGCTFEGTSEEVQQHERDDTDR 211
Query: 282 HLLYI 286
HL I
Sbjct: 212 HLELI 216
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKHDSVCPFKIIPCE---QKCPDTLMRRDMDRHCITVCQ 249
+ + CP E GC L+ H+ C F+ +PC C + +D+D H
Sbjct: 66 LDVFCPFEDGGCKKTLQWKDLQTHEETCEFRPVPCPNYLHGCEVIISYKDVDEH------ 119
Query: 250 MKLANCPFYAVGCQ---STIPQCMIQQH 274
L CP+ CQ +P + QQH
Sbjct: 120 --LKECPYRPYRCQFCNQEVPLALKQQH 145
>gi|432096071|gb|ELK26939.1| Serine/threonine-protein kinase Nek8 [Myotis davidii]
Length = 1141
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 865 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 924
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 925 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 973
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 759 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSRRDLPAHLQHDCPKRRLKCEF--CG 816
Query: 262 C 262
C
Sbjct: 817 C 817
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 788 CPTKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGA 844
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 845 RMMRRLLAQHATSECPKRTQPCTY 868
>gi|401404284|ref|XP_003881690.1| unnamed protein product [Neospora caninum Liverpool]
gi|325116103|emb|CBZ51657.1| unnamed protein product [Neospora caninum Liverpool]
Length = 3735
Score = 48.9 bits (115), Expect = 0.006, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
Query: 349 GKVNEEKKINEVKPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQE 408
G+ EE+K ++ D + +G V+ G+ + ++ +N++ GG+ + +
Sbjct: 2886 GQDEEEQKDGGMQGDEDSEASGRVDTEGSGRDVEGEAQRLEQPEANRTDAERGGQA-KVK 2944
Query: 409 KDSDGDVKEGKFTEGKNNGR-KVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANE 467
++ GD K + +G N G + EEDR + N RE DGG ET +E++ +
Sbjct: 2945 REEGGDGKRDQRDQGSNAGEPEGDEEDRCRERANEGRERQKDGGTAAEET--DEKENVAQ 3002
Query: 468 PGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEE 520
P + +G K ++G A DT E + EGR S + + G V +E
Sbjct: 3003 PSQDCEGSK--DDGSACDTSAKGDEKWSQEGRGQSNGVDEDRGGKAAKNVEKE 3053
>gi|350590687|ref|XP_003483122.1| PREDICTED: TNF receptor-associated factor 4 [Sus scrofa]
Length = 639
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 363 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 422
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 423 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 471
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 257 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSRRDLPAHLQHDCPKRRLKCEF--CG 314
Query: 262 C 262
C
Sbjct: 315 C 315
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 286 CPTKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGA 342
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 343 RMMRRLLAQHATSECPKRTQPCTY 366
>gi|291242395|ref|XP_002741094.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 552
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 31/164 (18%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNE-GCNAKFSAGHLEKH-DSVCPFKIIPCEQ--- 229
CN N H+ C + + C N GCN GHL H + CP +I+ CE
Sbjct: 96 CNWTGNFRDYHLNHIPTCEYEMIQCVNRNGCNVSIQRGHLSSHLEKDCPMRIVKCEYCTV 155
Query: 230 ------------KCPDT----------LMRRDMDRHCITV---CQMKLANCPFYAVGCQS 264
+CP T L R M++H T C KL C F VGC
Sbjct: 156 EVSFTNIEIHLLECPKTPEKCKFCGEFLPREMMEQHTDTKTGDCVRKLIACQFQDVGCHD 215
Query: 265 TIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL-KVLKNRVEELE 307
+ + +H + HLL ILQ + + + ++++++E+E
Sbjct: 216 MVEKSKTAEHNTRSMGEHLLMILQFIISLMAMVRSMRDKIDEVE 259
>gi|195051926|ref|XP_001993199.1| GH13208 [Drosophila grimshawi]
gi|193900258|gb|EDV99124.1| GH13208 [Drosophila grimshawi]
Length = 490
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRR-DMDRHCITVCQMKLANCPFYAVGC 262
C +F A L+ H + CP + C Q+C L+ R +++ H CQ C F GC
Sbjct: 225 CQREFCADTLQLHAAQCPRTPLACPQRCDAGLIARGELEAHLRDECQSLAVACSFKDAGC 284
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ +++ H + +HL L + + + +++LK+ V +L +Y
Sbjct: 285 RFKGPRQLLEAHLENSAAAHLSLMVSLSTRQGQQIQMLKSAVSKLSINY---------TG 335
Query: 322 SLSFAIKDLEAKL 334
+L + I D AK+
Sbjct: 336 TLLWKITDWSAKM 348
>gi|195118018|ref|XP_002003537.1| GI22040 [Drosophila mojavensis]
gi|193914112|gb|EDW12979.1| GI22040 [Drosophila mojavensis]
Length = 489
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L+ H + CP + C Q+C + R +++ H CQ C F GC
Sbjct: 224 CQREFSADTLQLHAAQCPRTPLACPQRCDAGPIPRGELEAHLRDECQSLALACSFKEAGC 283
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ +++ H +HL L + + + +++LK+ V +L +Y
Sbjct: 284 RFKGPRQLLEAHLESSAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 334
Query: 322 SLSFAIKDLEAKL 334
+L + I D AK+
Sbjct: 335 TLLWKITDWSAKM 347
>gi|195481743|ref|XP_002101761.1| GE17805 [Drosophila yakuba]
gi|194189285|gb|EDX02869.1| GE17805 [Drosophila yakuba]
Length = 317
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 104/198 (52%), Gaps = 32/198 (16%)
Query: 347 GEGKVNEEKKINEVKPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNE 406
G+ ++NE +INE + IN + + E +IN ++NE +I+ + +EG + NE
Sbjct: 39 GDPQINEGLQINE-----DPQINEDPQMDEGPQINEGLQINEDPQINEDPQMDEGLQINE 93
Query: 407 QEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKAN 466
+ + E +G G +V+E +I++ ++ DG +IN + ++NE + N
Sbjct: 94 YPQ-----INEYPQIDG---GLQVNEYPQINEYPQID-----DGLQINEDPQINEYPQIN 140
Query: 467 EPGKVTKGEKVSEEGKAN-----DTG-------KVNKEVRASEGRKVSEERNINEGKT-- 512
E ++ +G +++E+ + N D G ++N+ + EG +++E+ INE
Sbjct: 141 EYPQIDEGLQINEDPRINEYPQIDEGLQINEDFQINEYPQIDEGLQINEDPQINEYPQID 200
Query: 513 NGVRVNEEEKINAEGKVN 530
+G+++NE+ +IN ++N
Sbjct: 201 DGLQINEDPQINEYPQIN 218
>gi|298204321|gb|ADF56651.2| TNF receptor-associated factor 6 a [Cyprinus carpio]
Length = 543
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 26/133 (19%)
Query: 183 KELNEHMLHCGFISMICPN-------------------------EGCNAKFSAGHLEKHD 217
++L +H+ HC F ++ CP C F + + H+
Sbjct: 148 RQLEKHLSHCKFATVPCPQCLESVRKSHLDEHKSQQCLQRLMTCPACAGSFVYANKQIHE 207
Query: 218 SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277
+CPF CE C L+R + HC T C C F GC+ +P+ + QH +
Sbjct: 208 QICPFANTVCE-YCEMELIRDQLALHCDTDCLKAPVACTFSTFGCREKMPRNELAQHMQE 266
Query: 278 DLCSHLLYILQKL 290
H+ Y+ + L
Sbjct: 267 FTQMHMRYMAEFL 279
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN GC+ K LEKH S C F +PC Q C +++ + +D H C +L
Sbjct: 132 LTVRCPNVGCSDKMELRQLEKHLSHCKFATVPCPQ-CLESVRKSHLDEHKSQQCLQRLMT 190
Query: 255 CPFYA 259
CP A
Sbjct: 191 CPACA 195
>gi|145539269|ref|XP_001455329.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423128|emb|CAK87932.1| unnamed protein product [Paramecium tetraurelia]
Length = 472
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 188 HMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITV 247
H+ C F + C EGCN ++HD+ CPFK++ C+ C + R+ +++H +
Sbjct: 104 HIKSCQFKQVKCEYEGCNIDILLKDKDQHDNTCPFKLLQCKW-CQQEIWRKQLEQHELNE 162
Query: 248 CQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVL 299
C + C C S +P M+Q H D C +Y Q D LK L
Sbjct: 163 CLQRKVQCG----KCSSEVPILMMQNHV--DTCPENIYKCQLCLSDIKLKDL 208
>gi|149053498|gb|EDM05315.1| Tnf receptor associated factor 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 296
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C CPF
Sbjct: 20 PCAYCTKEFVYDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPTHLKDSCSTAFVLCPFK 79
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 80 ESGCKHRCPKLAMGRHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 128
>gi|327262485|ref|XP_003216054.1| PREDICTED: TNF receptor-associated factor 5-like [Anolis
carolinensis]
Length = 625
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHM-LHCGFISMICPNEGCNAKFSAGHLE 214
++ + L ++V NE C +K+L EH+ LHC + +C CN ++ +++
Sbjct: 193 QDHLQQCLFESVQCTNEGCCEKVL--QKDLKEHLGLHCNYRKELC--RYCNQPVTSINVK 248
Query: 215 KHDSV-CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
H+ CP + C C T++ ++ + H I VC +CP+ GC + I + + +
Sbjct: 249 THERRDCPEYPLICPHGCTQTILMKEAEEH-ILVCPAVEIDCPYKQYGCPAKIKRGKVLE 307
Query: 274 HRHDDLCSHLLYILQK 289
H + L H+L IL +
Sbjct: 308 HENIYLREHMLQILDR 323
>gi|449671702|ref|XP_002155932.2| PREDICTED: TNF receptor-associated factor 6-like [Hydra
magnipapillata]
Length = 311
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 192 CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCE----------------------- 228
C + + C EGC +F ++ H+ C +++ PC+
Sbjct: 155 CEYEEISCIYEGCMKRFLRCYMGLHEERCAYRVTPCDYCEERVRVRDAKNHLRTCERVPI 214
Query: 229 ---QKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLY 285
+ C ++R +MD H C + C F+++GC + +++ H +++C HL
Sbjct: 215 DCVEHCDAKIVRCEMDNHLANECPLHTIQCSFHSIGCDFLGERKLMKNHMEENVCKHLEL 274
Query: 286 ILQKLH-RDKPLKVLKNRVEE-LEKSYFDKLAEA 317
LQ ++ R+ L + V E +E+++F KL +A
Sbjct: 275 SLQSVNKRNTGLCLATQWVYEVIERNHFMKLLKA 308
>gi|423513917|ref|ZP_17490446.1| hypothetical protein IG3_05412 [Bacillus cereus HuA2-1]
gi|402443727|gb|EJV75622.1| hypothetical protein IG3_05412 [Bacillus cereus HuA2-1]
Length = 419
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 70/181 (38%), Gaps = 18/181 (9%)
Query: 329 DLEAKLGPFKEDTVNRYSGEGKVNEEKKINEVKPDGEGTINGEVNISEEGKINATDKVNE 388
D E P K + + GK E K E E I+ E ++ GK+ +K E
Sbjct: 215 DPEKPTDPGKPTEPEKPTEPGKPTEPGKPTEP----EKPIDPE-KPTDPGKLTEPEKPTE 269
Query: 389 KEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTI 448
EK ++ KP E K + EK ++ + + E E+ E
Sbjct: 270 PEKPTDPEKPTEPEKPKDPEKPTEPE-------------KPTEPEKPTEPEKPTEPEKPT 316
Query: 449 DGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNIN 508
D GK + E +K EP K T+ EK +E K D GK + + +E K +E
Sbjct: 317 DPGKPTEPEKPTEPEKPTEPEKPTEPEKPTEPEKPTDPGKPTEPEKPTEPEKPTEPEKPT 376
Query: 509 E 509
E
Sbjct: 377 E 377
>gi|440912014|gb|ELR61625.1| TNF receptor-associated factor 5 [Bos grunniens mutus]
Length = 580
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 29/133 (21%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------------------------- 218
L +H+ HC F + C NE C L++H S
Sbjct: 146 LQDHLQHCLFQPVQCSNENCREPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHE 205
Query: 219 --VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+CP + C KC T+ R ++D H + VC +CPF GC + +Q+H
Sbjct: 206 ENLCPEYPVSCPNKCLQTIPRTEVDEH-LAVCPEAEQDCPFKNYGCAVKDKRGNLQEHER 264
Query: 277 DDLCSHLLYILQK 289
L H+L +L+K
Sbjct: 265 SALRDHMLLVLEK 277
>gi|326429025|gb|EGD74595.1| hypothetical protein PTSG_05960 [Salpingoeca sp. ATCC 50818]
Length = 570
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 129 MSSEKREDRIDDFLQEMEISGFWSINRREAIAHILLKNVDFKNEFHCNMKFNSEKELN-- 186
+S ++R DFL E I A + VD K E +C+ K + E
Sbjct: 53 VSIQRRCPVCKDFLTESRIQP----------ARFVRHMVD-KLEVYCDNKHDGCAETTTI 101
Query: 187 ----EHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRR 238
+H+ C F + CPN+GC A +E H VCP + + CE KC + +RR
Sbjct: 102 ERRTQHLSRCLFKKVECPNDGCAVLLRAHEVEAHREVCPMETVHCENKCCRSRIRR 157
>gi|195119902|ref|XP_002004468.1| GI19951 [Drosophila mojavensis]
gi|193909536|gb|EDW08403.1| GI19951 [Drosophila mojavensis]
Length = 2411
Score = 48.1 bits (113), Expect = 0.011, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGK 424
E + E + EE ++ ++ E++++ + + E + E+++ +KE E +
Sbjct: 1259 EEMLKEEQRLKEEQRLKEEQRLKEEQRLKEQQRLKEEQRLKEEQR-----LKE----EQR 1309
Query: 425 NNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKAN 484
++ EE R+ +EQ + + ++ E R+ EEQ+ E ++ + +++ EE +
Sbjct: 1310 LKEEQLKEEQRLKEEQLKEEQRLKEELRLKEEQRLKEEQRLKEEQRLKEEQRLKEEQRLK 1369
Query: 485 DTGKVNKEVRASEGRKVSEERNINE 509
D ++ +E R E +++ EE+ + E
Sbjct: 1370 DEERLKEEQRLKEEQRLKEEQRLKE 1394
>gi|392352933|ref|XP_003751350.1| PREDICTED: TNF receptor-associated factor 5-like [Rattus
norvegicus]
Length = 586
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV-- 219
+L +V KN CN + + +H+ HC F ++ CPN+ C +++H S
Sbjct: 103 VLNLHVYCKNAPGCNARIILGR-FQDHLQHCSFQAVPCPNQSCREAMLRKDVKEHLSAYC 161
Query: 220 --------------------------CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
CP + C KC T+ R + H +TVC
Sbjct: 162 RFREEKCLYCKRDIVVTNLQDHEENSCPAYPVSCPNKCVQTIPRAGVKEH-LTVCPEAEQ 220
Query: 254 NCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
+CPF GC + +Q+H L H+L +L+K
Sbjct: 221 DCPFKHYGCTVKGKRGNLQEHERAALQDHMLLVLEK 256
>gi|66818149|ref|XP_642747.1| TRAF-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|74861434|sp|Q86K46.1|Y7243_DICDI RecName: Full=TNF receptor-associated factor family protein
DDB_G0277243
gi|60470835|gb|EAL68807.1| TRAF-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 423
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 39/162 (24%)
Query: 184 ELNEHMLHCGFISMICPNEG--CNAKFSAGHLEKHDSVCPFKIIPCE------------- 228
+L H+ C F+ + CPN+ C KF +KH + C + I CE
Sbjct: 121 QLESHLRECEFVFIECPNDPIRCKDKFRKNQTDKHMNKCQYVTINCEHCKEPVIKNDMPT 180
Query: 229 -------------QKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
+ C D RR ++ H C + +CP GC + I +C + QH
Sbjct: 181 HIENDCSIISLECEFCKDKFGRRSLENHIANECPNVVIDCPHKEGGCTARIKRCYLSQHL 240
Query: 276 HDDLCSHLLYILQKL---HR------DKPLKVLKNRVEELEK 308
++ +H+ Y +QK+ HR D+ +K L+ +ELEK
Sbjct: 241 TEED-NHIRY-MQKIIEKHRIQVEESDRIIKKLRVDYKELEK 280
>gi|148226504|ref|NP_001087501.1| TNF receptor-associated factor 4 [Xenopus laevis]
gi|51258319|gb|AAH80018.1| MGC82199 protein [Xenopus laevis]
Length = 470
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 151 WSINRREAIAHILLKNVDFKNEFHCNMKFNSE---KELNEHMLH-CGFISMICPNEGCNA 206
WS ++ AH+ N+ N C + +++ ++L EHM H C + C E C
Sbjct: 92 WSGQLKQLQAHL---NICAFNVIPCPNRCSTKLIRRDLPEHMQHDCPKRKVRC--EFCGT 146
Query: 207 KFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
F+ E+H CP + + CE KC +MRR + +H + C + CP+
Sbjct: 147 DFTGEAYEEHQGCCPQESVYCENKCGARMMRRVLSQHSLVECPKRTQPCPY 197
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 185 LNEH-MLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDR 242
L++H ++ C + CP CN +F ++ H CP PC +C ++ R D+
Sbjct: 180 LSQHSLVECPKRTQPCPY--CNKEFVFDTIQSHQYQCPRFPTPCPNQCGVSSIAREDLSS 237
Query: 243 HCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKN 301
H C L CPF GC+ P+ + +H + + HL + + R + + L+
Sbjct: 238 HIKESCNSALVLCPFKDSGCKHRGPKITMSRHLEETMRVHLSMMSSLVSRQRQEILELRK 297
Query: 302 RVEELEKS 309
+VEEL S
Sbjct: 298 QVEELSVS 305
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
EGC L+ H ++C F +IPC +C L+RRD+ H C + C F
Sbjct: 88 EGCRWSGQLKQLQAHLNICAFNVIPCPNRCSTKLIRRDLPEHMQHDCPKRKVRCEF 143
>gi|297272238|ref|XP_001107048.2| PREDICTED: TNF receptor-associated factor 4-like [Macaca mulatta]
Length = 352
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 76 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 135
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 136 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 184
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 4 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRL 61
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 62 LAQHATSECPKRTQPCTY 79
>gi|15451442|dbj|BAB64525.1| hypothetical protein [Macaca fascicularis]
Length = 352
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 76 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 135
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 136 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 184
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C ++C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 4 SRRDLPAHLQHDCPKRRLMC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRL 61
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 62 LAQHATSECPKRTQPCTY 79
>gi|195437833|ref|XP_002066844.1| GK24337 [Drosophila willistoni]
gi|194162929|gb|EDW77830.1| GK24337 [Drosophila willistoni]
Length = 489
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +FSA L H + CP + C Q+C + R +++ H C +C F GC
Sbjct: 224 CQREFSADTLPLHAAQCPRAPLACPQRCDAGPIARAELEAHLRDECTSLAVSCSFKEAGC 283
Query: 263 QSTIPQCMIQQHRHDDLCSHL-LYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+ P+ M+ H +HL L + + + +++LK+ V +L +Y
Sbjct: 284 RFKGPRQMLDAHLESSAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINY---------TG 334
Query: 322 SLSFAIKDLEAKL 334
+L + I D AK+
Sbjct: 335 TLLWKITDWSAKM 347
>gi|344276796|ref|XP_003410192.1| PREDICTED: TNF receptor-associated factor 5-like [Loxodonta
africana]
Length = 528
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 29/131 (22%)
Query: 187 EHMLHCGFISMICPNEGCNAKFSAGHLEKHDS---------------------------- 218
+H+L C F ++ C NE C L++H S
Sbjct: 97 DHLLQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHEEN 156
Query: 219 VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+CP + C KC + R ++D H + VC +CPF GC + +++H H
Sbjct: 157 LCPEYPVSCPNKCLQIIPRTEVDEH-LGVCPEAEQDCPFKHYGCTVMDKRRNLKEHEHSA 215
Query: 279 LCSHLLYILQK 289
L H+L +L+K
Sbjct: 216 LRDHMLLVLEK 226
>gi|118368143|ref|XP_001017281.1| TRAF-type zinc finger family protein [Tetrahymena thermophila]
gi|89299048|gb|EAR97036.1| TRAF-type zinc finger family protein [Tetrahymena thermophila
SB210]
Length = 322
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 165 KNVDFKNEFHCNMKFNSEK--ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPF 222
KN +F N+ C N K E ++H+ C + CPN+GC++K H C F
Sbjct: 150 KNCEF-NKIKCKYCLNPLKIEEQDKHLQECDHRIISCPNQGCSSKMQYLKRNVHLDQCKF 208
Query: 223 KIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
++I C Q C + +D+D H + +C +L CP
Sbjct: 209 RLIDCTQ-CQQKIQFKDLDHHTLNLCINRLIQCP 241
>gi|348577237|ref|XP_003474391.1| PREDICTED: TNF receptor-associated factor 5-like [Cavia porcellus]
Length = 558
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ IPC + C + ++RRD+ H CQ +
Sbjct: 106 LYVYCKNAPGCNAKMILGRYQDHLQQCLFQAIPCSNENCQEAVLRRDLQEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 30/151 (19%)
Query: 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------- 218
V KN CN K + +H+ C F ++ C NE C L++H S
Sbjct: 108 VYCKNAPGCNAKMILGR-YQDHLQQCLFQAIPCSNENCQEAVLRRDLQEHLSAYCQFREE 166
Query: 219 --------------------VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
+CP + C KC + R +D H + VC +CPF
Sbjct: 167 KCLYCKKDVVVINLQNHEENLCPEYPLSCPNKCSQVIPRTKVDEH-LAVCPEAEQHCPFK 225
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
GC + +Q+H L H+L +L+K
Sbjct: 226 RYGCAVKDKRGNLQEHEQSALREHMLLVLEK 256
>gi|351710403|gb|EHB13322.1| TNF receptor-associated factor 4 [Heterocephalus glaber]
Length = 466
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +F ++ H CP +PC +C T+ R D+ H C L CPF GC
Sbjct: 194 CTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFKDSGC 253
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
+ P+ + +H D + HL + + R + L+ L+ +EEL
Sbjct: 254 KHRCPKLAMARHVEDSVKPHLAMMCALVSRQRQELQELRRELEEL 298
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 84 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSRRDLPAHLQHDCPKRRLKCEF--CG 141
Query: 262 C 262
C
Sbjct: 142 C 142
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 118 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYETHEGMCPQESVYCENKCGARMMRRL 175
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 176 LAQHATSECPKRTQACTY 193
>gi|354503623|ref|XP_003513880.1| PREDICTED: TNF receptor-associated factor 4 [Cricetulus griseus]
gi|344258449|gb|EGW14553.1| TNF receptor-associated factor 4 [Cricetulus griseus]
Length = 470
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCAYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPSHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 ESGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGQLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCAY 197
>gi|281206315|gb|EFA80504.1| RGS-containing protein kinase [Polysphondylium pallidum PN500]
Length = 428
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHC 244
++ H C + + C + CNA F+ + H + C I C+ +C +++++ ++H
Sbjct: 149 MDAHYEECPYRPVQC--QHCNADFTHNEITNHLNECDMIKIECD-RCNAPMIKKEFEKHK 205
Query: 245 ITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVE 304
+ +C CPF+ GC +T + ++ H L HLL L K H + LK
Sbjct: 206 LNLCPNYHIQCPFFESGCNATFDRKDLESHIEKSLSHHLL--LMKSHYTDTITNLKKEFS 263
Query: 305 ELEKSYFDKLAE 316
L K DK+ +
Sbjct: 264 LLLKDKDDKIKQ 275
>gi|194217359|ref|XP_001918045.1| PREDICTED: TNF receptor-associated factor 4 [Equus caballus]
Length = 434
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 158 PCTYCAKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 217
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 218 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 266
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 52 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSRRDLPAHLQHDCPKRRLKCEF--CG 109
Query: 262 C 262
C
Sbjct: 110 C 110
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 86 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGMCPQESVYCENKCGARMMRRL 143
Query: 240 MDRHCITVCQMKLANCPFYA 259
+ +H + C + C + A
Sbjct: 144 LAQHATSECPKRTQPCTYCA 163
>gi|149708636|ref|XP_001489899.1| PREDICTED: TNF receptor-associated factor 5 [Equus caballus]
Length = 558
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHM-LHCGFISMICPNEGCNAKFSAGHLE 214
++ + L + V NE HC K L EH+ +C F C C +L+
Sbjct: 126 QDHLQQCLFQAVQCSNE-HCQESV-LRKNLKEHLSAYCQFREEKCLY--CKKDVVVINLQ 181
Query: 215 KHD-SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
H+ ++CP + C KC + R ++D H + VC +CPF GC + +Q+
Sbjct: 182 NHEENMCPEYPVSCPNKCLQIIPRTEVDEH-LAVCPEAEQDCPFKQYGCPVKDKRGNLQE 240
Query: 274 HRHDDLCSHLLYILQK 289
H H L H+L +L+K
Sbjct: 241 HEHSALRDHMLLVLEK 256
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C + C ++++R+++ H CQ +
Sbjct: 106 LYVYCKNAPGCNAKIILGRYQDHLQQCLFQAVQCSNEHCQESVLRKNLKEHLSAYCQFRE 165
Query: 253 ANCPF 257
C +
Sbjct: 166 EKCLY 170
>gi|126290192|ref|XP_001367090.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Monodelphis
domestica]
Length = 542
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H S C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQIYCRNESRGCTEQLTLGHLLVHLKSECQFEELPCVRADCKEKILRKDLQDHVEKSCKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQH 274
+ A C + C+S +P +Q+H
Sbjct: 172 REATCQY----CKSQVPMITLQKH 191
>gi|119911649|ref|XP_001251944.1| PREDICTED: TNF receptor-associated factor 4-like [Bos taurus]
Length = 503
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 227 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 286
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 287 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 335
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 121 EGCRWNGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 178
Query: 262 C 262
C
Sbjct: 179 C 179
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 155 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGARMMRRL 212
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 213 LAQHATSECPKRTQPCTY 230
>gi|395504481|ref|XP_003756577.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Sarcophilus
harrisii]
Length = 542
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H S C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQIYCRNESRGCTEQLTLGHLLVHLKSDCQFEELPCVRADCKEKILRKDLPGHVEKSCKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C + C+S +P +Q+H D
Sbjct: 172 REATCQY----CKSQVPMITLQKHEDTD 195
>gi|298710552|emb|CBJ25616.1| Ankyrin, TRAF-type zinc finger protein [Ectocarpus siliculosus]
Length = 2043
Score = 47.0 bits (110), Expect = 0.026, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-VCPFKIIPCEQKCPD 233
C + +E N C ++C + C K A L +H++ CP +++ CEQ C +
Sbjct: 1691 CGVSVVAEDYANHQATTCPMRPVVC--KACKNKVVASALSRHEAETCPMRMVECEQGCGE 1748
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCS 281
+ + RH C + C +GC ++ M+ +H LCS
Sbjct: 1749 KVPVSGISRHLAKTCSLMCVTC---RLGCGQSMSLKMLAEH-EKSLCS 1792
Score = 39.3 bits (90), Expect = 5.3, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV-CPFKIIPCEQKCP- 232
C + E+ C + C N GC ++ L+ H S CP +++PC CP
Sbjct: 75 CGVSLPLERHAKHLAESCPRVPRSCTN-GCGSRVRGEDLQHHLSKECPKRVVPCPLGCPE 133
Query: 233 DTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLL 284
D L ++ H C ++ C GC + C +QH + CS L
Sbjct: 134 DQLWAEEVSSHLRDSCPLQREPC---RRGCGEQVAVCSREQHEAAE-CSERL 181
>gi|355568364|gb|EHH24645.1| Cysteine-rich domain associated with RING and Traf domains protein
1, partial [Macaca mulatta]
Length = 424
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 148 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 207
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 208 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 256
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 42 EGCRWNGPLRHLQGHLNTCSFNVVPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 99
Query: 262 C 262
C
Sbjct: 100 C 100
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 71 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 127
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 128 RMMRRLLAQHATSECPKRTQPCTY 151
>gi|383421239|gb|AFH33833.1| TNF receptor-associated factor 5 [Macaca mulatta]
Length = 557
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C + C ++++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCQESVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|124295371|gb|ABN04153.1| tumor necrosis factor receptor-associated factor 4 [Branchiostoma
belcheri]
Length = 465
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLM 236
+F S +NE C ++ CP+ C +F L H CP + C +C P +
Sbjct: 178 RFLSNHTVNE----CAKRTVPCPH--CGKQFLYDTLPDHSYNCPRFPVSCPNRCDPTKIP 231
Query: 237 RRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDK-P 295
R ++++H C + CPFY GC+ P+ + +H + SHL + Q ++R K
Sbjct: 232 REEVEQHLHDNCPSTMVACPFYESGCKHKCPRNSLDRHLQQESESHLKLMCQLVNRQKND 291
Query: 296 LKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
+ L+N+++ + + +L + I D++AK FKE
Sbjct: 292 ISQLRNQLQTVTTN---------QDGTLLWKIADIDAK---FKE 323
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 24/104 (23%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA----- 253
C E C + S +E H+ CP + + CE KC ++RR + H + C +
Sbjct: 139 CKCEFCGMRMSYERMEHHEGNCPQESVYCENKCGARMLRRFLSNHTVNECAKRTVPCPHC 198
Query: 254 --------------NCPFYAVGC-----QSTIPQCMIQQHRHDD 278
NCP + V C + IP+ ++QH HD+
Sbjct: 199 GKQFLYDTLPDHSYNCPRFPVSCPNRCDPTKIPREEVEQHLHDN 242
>gi|109018380|ref|XP_001108970.1| PREDICTED: TNF receptor-associated factor 5-like [Macaca mulatta]
Length = 557
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C + C + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCQEPVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|402857258|ref|XP_003893183.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Papio
anubis]
gi|402857260|ref|XP_003893184.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Papio
anubis]
gi|402857262|ref|XP_003893185.1| PREDICTED: TNF receptor-associated factor 5 isoform 3 [Papio
anubis]
Length = 557
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C + C + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCREPVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|350589168|ref|XP_003482803.1| PREDICTED: TNF receptor-associated factor 5 [Sus scrofa]
Length = 558
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH +C F C C +L+ H+ ++CP + C KC + R ++
Sbjct: 151 KDLKEHASTYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVSCPNKCLQMIPRTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK-LHRDKPLKVL 299
D H + VC +CPF GC + +Q+H H L H+L +L+K L ++ + L
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCMVKEKRGHLQEHEHSALRDHMLLVLEKNLQLEEQISDL 267
Query: 300 KNRVEELEKSYFDKLAEA 317
+E+ E S +LAE
Sbjct: 268 YKSLEQKE-SKIQQLAET 284
>gi|417401488|gb|JAA47629.1| Putative tnf receptor-associated factor 4 [Desmodus rotundus]
Length = 470
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + ++R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVNRQRQELQELRRELEEL 302
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LGQHATSECPKRTQPCTY 197
>gi|355626940|ref|ZP_09048999.1| hypothetical protein HMPREF1020_03078 [Clostridium sp. 7_3_54FAA]
gi|354820588|gb|EHF05000.1| hypothetical protein HMPREF1020_03078 [Clostridium sp. 7_3_54FAA]
Length = 3474
Score = 46.6 bits (109), Expect = 0.033, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 366 GTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKN 425
G +G + S+ + + T+ E +K S+ K +E GK +E KD++ GK+
Sbjct: 65 GIESGVSDTSDGDRADRTENSAEPDKDSDTGKDSESGKSSEPGKDNE---------TGKD 115
Query: 426 NGR-KVSEEDRIHDEQNVNREGTIDG-GKINNETRVNEEQKANEPGKVTKGEKVSEEGKA 483
+G K E R + + G G GK + + NE K +EPGK ++ K E GK
Sbjct: 116 SGTGKEDEPGRDSEPGKEDEPGQDSGTGKEDEPGQDNEAGKEDEPGKDSEAGKEDEPGKD 175
Query: 484 NDTGKVNKEVRASEGRKVSEERNINEGKTNG 514
++ GK ++ + SE K E +E G
Sbjct: 176 SEAGKEDESGKDSEAGKEDEPGKDSEAGKEG 206
Score = 45.4 bits (106), Expect = 0.070, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 13/165 (7%)
Query: 358 NEVKPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNE--QEKDSDGDV 415
N +PD + + SE GK + K NE K S K +E G+ +E +E + D
Sbjct: 84 NSAEPDKDSDTGKD---SESGKSSEPGKDNETGKDSGTGKEDEPGRDSEPGKEDEPGQDS 140
Query: 416 KEGKFTE-GKNNGRKVSEEDRIHDEQNVNREGT----IDGGKINNETRVNEEQKANEPGK 470
GK E G++N + +ED + +E + GK + + +E K +EPGK
Sbjct: 141 GTGKEDEPGQDN--EAGKEDEPGKDSEAGKEDEPGKDSEAGKEDESGKDSEAGKEDEPGK 198
Query: 471 VTKGEKVSEEGKANDTGKVNKEVRASE-GRKVSEERNINEGKTNG 514
++ K E GK ++ GK ++ + SE G++ ++ G NG
Sbjct: 199 DSEAGKEGEPGKDSEAGKEDEPGKDSEPGKEDEPAQDRGAGSENG 243
>gi|2138180|gb|AAC51329.1| TNF receptor associated factor 5, partial [Homo sapiens]
Length = 538
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 132 KDLKEHLSASCQFRKEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 189
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +QQH H L H+ +L+K + L+
Sbjct: 190 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLVLEKNVQ------LE 242
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 243 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 278
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 87 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRK 146
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 147 EKCLY----CKKDVVVINLQNHE-ENLC 169
>gi|194381990|dbj|BAG64364.1| unnamed protein product [Homo sapiens]
Length = 568
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 38/183 (20%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------------------------- 218
L +H+ C F + C NE C L++H S
Sbjct: 136 LQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHE 195
Query: 219 --VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+CP + C C +++ ++D H + VC +CPF GC T + +QQH H
Sbjct: 196 ENLCPEYPVFCPNNCAKIILKTEVDEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEH 254
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
L H+ +L+K + L+ ++ +L KS K ++ ++ L+ IK LE +
Sbjct: 255 SALREHMRLVLEKNVQ------LEEQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQ 305
Query: 337 FKE 339
F +
Sbjct: 306 FAQ 308
>gi|355558795|gb|EHH15575.1| hypothetical protein EGK_01685 [Macaca mulatta]
gi|355745941|gb|EHH50566.1| hypothetical protein EGM_01419 [Macaca fascicularis]
Length = 568
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 38/183 (20%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------------------------- 218
L +H+ C F ++ C NE C L++H S
Sbjct: 136 LQDHLQQCLFQAVQCSNENCQEPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHE 195
Query: 219 --VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+CP + C C +++ ++D H + VC +CPF GC T + +Q+H H
Sbjct: 196 ENLCPEYPVFCPNNCAKIILKTEVDEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEH 254
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
L H+ +L+K + L+ ++ +L KS K ++ ++ L+ IK LE +
Sbjct: 255 SALREHMRLVLEKNVQ------LEEQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQ 305
Query: 337 FKE 339
F +
Sbjct: 306 FAQ 308
>gi|11321603|ref|NP_004610.1| TNF receptor-associated factor 5 [Homo sapiens]
gi|22027627|ref|NP_665702.1| TNF receptor-associated factor 5 [Homo sapiens]
gi|77404348|ref|NP_001029082.1| TNF receptor-associated factor 5 [Homo sapiens]
gi|30580600|sp|O00463.2|TRAF5_HUMAN RecName: Full=TNF receptor-associated factor 5; AltName: Full=RING
finger protein 84
gi|2982671|dbj|BAA25262.1| TRAF5 [Homo sapiens]
gi|20810009|gb|AAH29600.1| TNF receptor-associated factor 5 [Homo sapiens]
gi|49168598|emb|CAG38794.1| TRAF5 [Homo sapiens]
gi|119613826|gb|EAW93420.1| TNF receptor-associated factor 5, isoform CRA_b [Homo sapiens]
gi|119613828|gb|EAW93422.1| TNF receptor-associated factor 5, isoform CRA_b [Homo sapiens]
gi|254071489|gb|ACT64504.1| TNF receptor-associated factor 5 protein [synthetic construct]
gi|254071491|gb|ACT64505.1| TNF receptor-associated factor 5 protein [synthetic construct]
gi|307685711|dbj|BAJ20786.1| TNF receptor-associated factor 5 [synthetic construct]
Length = 557
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSASCQFRKEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +QQH H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRK 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|126290189|ref|XP_001367040.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Monodelphis
domestica]
Length = 567
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H S C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQIYCRNESRGCTEQLTLGHLLVHLKSECQFEELPCVRADCKEKILRKDLQDHVEKSCKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQH 274
+ A C + C+S +P +Q+H
Sbjct: 172 REATCQY----CKSQVPMITLQKH 191
>gi|397483159|ref|XP_003812771.1| PREDICTED: TNF receptor-associated factor 4 [Pan paniscus]
Length = 465
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 83 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 140
Query: 262 C 262
C
Sbjct: 141 C 141
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 112 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 168
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 169 RMMRRLLAQHATSECPKRTQPCTY 192
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 189 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 248
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 249 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 297
>gi|344290577|ref|XP_003417014.1| PREDICTED: TNF receptor-associated factor 4 [Loxodonta africana]
Length = 470
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C+ +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCSKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 194 FISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
I I EGC HL+ H + C F ++PC +CP L RRD+ H C +
Sbjct: 80 LIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSRRDLPAHLQHDCPKRRL 139
Query: 254 NCPFYAVGC 262
C F GC
Sbjct: 140 KCEF--CGC 146
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCTY 197
>gi|224047172|ref|XP_002194259.1| PREDICTED: TNF receptor-associated factor 5 [Taeniopygia guttata]
Length = 557
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 183 KELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ C F C + CN ++E H+ + CP +PC Q C ++++++
Sbjct: 150 KDLKEHLRQQCKFREERC--QYCNTYVVFINIENHEKNDCPDYPVPCLQNCSQIILKKEI 207
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
++H VC +CP+ GC + + + +H + L H+L IL K
Sbjct: 208 EKH-HAVCPEAEVDCPYKQYGCHVKVKRGKLAEHENSALREHMLQILDK 255
>gi|426333687|ref|XP_004028403.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Gorilla
gorilla gorilla]
Length = 557
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREAVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|410980323|ref|XP_003996527.1| PREDICTED: TNF receptor-associated factor 4 [Felis catus]
Length = 470
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQSHLNTCSFNVIPCPNRCPTKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCAKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKESCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPFYA 259
+ +H + C + C + A
Sbjct: 180 LAQHASSECPKRTQPCTYCA 199
>gi|410300842|gb|JAA29021.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410300844|gb|JAA29022.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410300846|gb|JAA29023.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410300848|gb|JAA29024.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410300850|gb|JAA29025.1| TNF receptor-associated factor 5 [Pan troglodytes]
Length = 557
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|114572480|ref|XP_001169985.1| PREDICTED: TNF receptor-associated factor 5 isoform 4 [Pan
troglodytes]
gi|332811853|ref|XP_003308783.1| PREDICTED: TNF receptor-associated factor 5 [Pan troglodytes]
gi|397486250|ref|XP_003814243.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Pan
paniscus]
gi|397486252|ref|XP_003814244.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Pan
paniscus]
gi|397486254|ref|XP_003814245.1| PREDICTED: TNF receptor-associated factor 5 isoform 3 [Pan
paniscus]
gi|410221044|gb|JAA07741.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410259310|gb|JAA17621.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410329663|gb|JAA33778.1| TNF receptor-associated factor 5 [Pan troglodytes]
Length = 557
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|402857264|ref|XP_003893186.1| PREDICTED: TNF receptor-associated factor 5 isoform 4 [Papio
anubis]
Length = 568
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 38/183 (20%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------------------------- 218
L +H+ C F ++ C NE C L++H S
Sbjct: 136 LQDHLQQCLFQAVQCSNENCREPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHE 195
Query: 219 --VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+CP + C C +++ ++D H + VC +CPF GC T + +Q+H H
Sbjct: 196 ENLCPEYPVFCPNNCAKIILKTEVDEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEH 254
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
L H+ +L+K + L+ ++ +L KS K ++ ++ L+ IK LE +
Sbjct: 255 SALREHMRLVLEKNVQ------LEEQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQ 305
Query: 337 FKE 339
F +
Sbjct: 306 FAQ 308
>gi|155372275|ref|NP_001094750.1| TNF receptor-associated factor 4 [Bos taurus]
gi|154425549|gb|AAI51615.1| TRAF4 protein [Bos taurus]
gi|440912264|gb|ELR61848.1| TNF receptor-associated factor 4 [Bos grunniens mutus]
Length = 470
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWNGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCTY 197
>gi|395504479|ref|XP_003756576.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Sarcophilus
harrisii]
Length = 567
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H S C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQIYCRNESRGCTEQLTLGHLLVHLKSDCQFEELPCVRADCKEKILRKDLPGHVEKSCKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C + C+S +P +Q+H D
Sbjct: 172 REATCQY----CKSQVPMITLQKHEDTD 195
>gi|296476876|tpg|DAA18991.1| TPA: TNF receptor-associated factor 4 [Bos taurus]
Length = 470
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWNGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCTY 197
>gi|355753869|gb|EHH57834.1| Cysteine-rich domain associated with RING and Traf domains protein
1, partial [Macaca fascicularis]
Length = 424
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 148 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 207
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 208 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 256
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 42 EGCRWNGPLRHLQGHLNTCSFNVVPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 99
Query: 262 C 262
C
Sbjct: 100 C 100
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 71 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 127
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 128 RMMRRLLAQHATSECPKRTQPCTY 151
>gi|124806765|ref|XP_001350826.1| conserved protein [Plasmodium falciparum 3D7]
gi|23496955|gb|AAN36506.1| conserved protein [Plasmodium falciparum 3D7]
Length = 1846
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Query: 403 KGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTI-DGGKINNETRVNE 461
+G E++ +D ++KE + +KV EE ++ +EQ V E + + K+ E ++ E
Sbjct: 1488 RGEEEKMSADENMKE---EQKMREEQKVGEEQKVGEEQKVGEEQKLREEQKMREEQKMRE 1544
Query: 462 EQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEE 521
EQK E K+ + +KV EE K + K+ +E + E +KV EE+ + E + ++ EE+
Sbjct: 1545 EQKMREEQKMREEQKVREEQKMREEQKMREEQKMREEQKVREEQKLREEQ----KMREEQ 1600
Query: 522 KINAEGKV 529
K+ E K+
Sbjct: 1601 KMREEQKM 1608
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 365 EGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGK 424
E ++ + N+ EE K+ KV E++K+ + K E K E++K +
Sbjct: 1491 EEKMSADENMKEEQKMREEQKVGEEQKVGEEQKVGEEQKLREEQKMREE----------- 1539
Query: 425 NNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKAN 484
+K+ EE ++ +EQ + E K+ E ++ EEQK E K+ + +KV EE K
Sbjct: 1540 ---QKMREEQKMREEQKMREEQ-----KVREEQKMREEQKMREEQKMREEQKVREEQKLR 1591
Query: 485 DTGKVNKEVRASEGRKV 501
+ K+ +E + E +K+
Sbjct: 1592 EEQKMREEQKMREEQKM 1608
>gi|332247868|ref|XP_003273083.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Nomascus
leucogenys]
gi|332247870|ref|XP_003273084.1| PREDICTED: TNF receptor-associated factor 5 isoform 3 [Nomascus
leucogenys]
Length = 557
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|291405475|ref|XP_002718965.1| PREDICTED: TNF receptor-associated factor 4-like [Oryctolagus
cuniculus]
Length = 470
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++ C +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVVACPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGSRMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCTY 197
>gi|301763601|ref|XP_002917221.1| PREDICTED: TNF receptor-associated factor 5-like [Ailuropoda
melanoleuca]
gi|281340323|gb|EFB15907.1| hypothetical protein PANDA_005426 [Ailuropoda melanoleuca]
Length = 558
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 39/201 (19%)
Query: 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------- 218
V KN CN K + +H+ C F ++ C NE C L++H S
Sbjct: 108 VYCKNAPGCNAKIILGR-FQDHLQQCLFQAVQCSNENCQELVLRKDLKEHLSARCHFREE 166
Query: 219 --------------------VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
+CP + C KC + R ++D H + VC +CPF
Sbjct: 167 KCLYCKKDVVVINLQNHEENLCPEYPVSCPNKCLQIIPRTEVDEH-LAVCPEGEQDCPFK 225
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAP 318
GC + +Q+H H L H+L +L+K + L+ ++ +L KS K ++
Sbjct: 226 HYGCAVKDKRGNLQEHEHSALRDHMLLVLEKNFQ------LEEQISDLYKSLEQKESK-- 277
Query: 319 DVRSLSFAIKDLEAKLGPFKE 339
++ L+ +K E + F +
Sbjct: 278 -IQQLAETVKKFEKEFKQFAQ 297
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C + C + ++R+D+ H C +
Sbjct: 106 LYVYCKNAPGCNAKIILGRFQDHLQQCLFQAVQCSNENCQELVLRKDLKEHLSARCHFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|1041446|emb|CAA63103.1| Cysteine rich motif Associated to Ring and Traf domains protein
(mCART1) [Mus musculus]
Length = 470
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C+ CPF
Sbjct: 194 PCAYCTKEFVYDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPTHLKDSCRTAFVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 ESGCKHRCPKLAMGRHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGVCPQESVFCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCAY 197
>gi|380796467|gb|AFE70109.1| TNF receptor-associated factor 5, partial [Macaca mulatta]
Length = 515
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 109 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 166
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 167 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 219
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 220 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 255
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C + C ++++R+D+ H CQ +
Sbjct: 64 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCQESVLRKDLKEHLSAYCQFRE 123
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 124 EKCLY----CKKDVVVINLQNHE-ENLC 146
>gi|426333685|ref|XP_004028402.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Gorilla
gorilla gorilla]
Length = 620
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 214 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 271
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 272 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 324
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 325 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 360
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 169 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREAVLRKDLKEHLSAYCQFRE 228
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 229 EKCLY----CKKDVVVINLQNHE-ENLC 251
>gi|359320300|ref|XP_003435282.2| PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 4
[Canis lupus familiaris]
Length = 462
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQSHLNTCSFNVIPCPNRCPTKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHAASECPKRTQPCTY 197
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKESCSTALVLCPFK 253
Query: 259 AVGCQSTIPQC---MIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ + +C ++ +H + + HL + + R + L+ ++ +EEL
Sbjct: 254 DSGCKHRV-RCXDVLLSRHLGESVKPHLAMMCALVSRQRQELQEMRRELEEL 304
>gi|441613157|ref|XP_003273082.2| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Nomascus
leucogenys]
Length = 618
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 212 KDLKEHLSAYCQFREEKC--LYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 269
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 270 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 322
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 323 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 358
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 167 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFRE 226
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 227 EKCLY----CKKDVVVINLQNHE-ENLC 249
>gi|432851185|ref|XP_004066897.1| PREDICTED: TNF receptor-associated factor 6-like [Oryzias latipes]
Length = 569
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 185 LNEH-MLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L EH + C M CP+ C A F E H+ CPF + C Q C L+R M+ H
Sbjct: 182 LEEHATVECPRRPMSCPD--CVAVFVYEEREMHEQQCPFASVMC-QYCEMDLIRDQMESH 238
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
C T C C F GC+ + + + QH + H+ Y+ + L
Sbjct: 239 CDTDCPKAPIACTFSIFGCKERMQRHNLAQHMQEFTQMHMRYMAEFL 285
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN C K HLEKH + C F +PC Q C + + ++ H C + +
Sbjct: 138 LTVRCPNSDCGEKMELRHLEKHLAQCQFATVPCSQ-CQQPVRKSYLEEHATVECPRRPMS 196
Query: 255 CP 256
CP
Sbjct: 197 CP 198
>gi|395849128|ref|XP_003797187.1| PREDICTED: TNF receptor-associated factor 4 [Otolemur garnettii]
Length = 470
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSAPLRHLQGHLNACSFNVVPCPNRCPTKLSRRDLPVHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 122 SRRDLPVHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCTY 197
>gi|354473206|ref|XP_003498827.1| PREDICTED: TNF receptor-associated factor 3 [Cricetulus griseus]
gi|344238770|gb|EGV94873.1| TNF receptor-associated factor 3 [Cricetulus griseus]
Length = 567
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H S C F+ +PC + C + ++RRD+ H C+
Sbjct: 112 LQICCRNEGRGCAEQLTLGHLLMHLKSECQFEELPCLRADCKEKVLRRDLRDHVEKACKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P +Q+H D
Sbjct: 172 REATCNH----CKSQVPMITLQKHEDTD 195
>gi|403279893|ref|XP_003931477.1| PREDICTED: TNF receptor-associated factor 4 [Saimiri boliviensis
boliviensis]
Length = 470
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCNFNVVPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY 197
>gi|402899129|ref|XP_003912556.1| PREDICTED: TNF receptor-associated factor 4 [Papio anubis]
gi|380787345|gb|AFE65548.1| TNF receptor-associated factor 4 [Macaca mulatta]
gi|383413373|gb|AFH29900.1| TNF receptor-associated factor 4 [Macaca mulatta]
gi|384940764|gb|AFI33987.1| TNF receptor-associated factor 4 [Macaca mulatta]
Length = 470
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWNGPLRHLQGHLNTCSFNVVPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY 197
>gi|50748724|ref|XP_421378.1| PREDICTED: TNF receptor-associated factor 3 [Gallus gallus]
Length = 567
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 201 NEGCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQMKLANCPFY 258
N+GC + S G L H + C F+ +PC + C + ++R+D+ H C+ + C +
Sbjct: 120 NKGCKEQLSLGQLLMHLKTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKY- 178
Query: 259 AVGCQSTIPQCMIQQHRHDD 278
C+S +P M+Q+H D
Sbjct: 179 ---CKSQVPMIMLQKHEDTD 195
>gi|119613825|gb|EAW93419.1| TNF receptor-associated factor 5, isoform CRA_a [Homo sapiens]
gi|119613827|gb|EAW93421.1| TNF receptor-associated factor 5, isoform CRA_a [Homo sapiens]
Length = 621
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 215 KDLKEHLSASCQFRKEKC--LYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 272
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +QQH H L H+ +L+K + L+
Sbjct: 273 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLVLEKNVQ------LE 325
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 326 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 361
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 170 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRK 229
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 230 EKCLY----CKKDVVVINLQNHE-ENLC 252
>gi|395748772|ref|XP_002827257.2| PREDICTED: TNF receptor-associated factor 4 [Pongo abelii]
Length = 452
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 70 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 127
Query: 262 C 262
C
Sbjct: 128 C 128
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 99 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 155
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 156 RMMRRLLAQHATSECPKRTQPCTY 179
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C+ +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 176 PCTYCSKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 235
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 236 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 284
>gi|296202166|ref|XP_002748281.1| PREDICTED: TNF receptor-associated factor 4 [Callithrix jacchus]
Length = 470
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY 197
>gi|332811851|ref|XP_001170017.2| PREDICTED: TNF receptor-associated factor 5 isoform 5 [Pan
troglodytes]
Length = 621
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 215 KDLKEHLSAYCQFREEKC--LYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 272
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H H L H+ +L+K + L+
Sbjct: 273 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEHSALREHMRLVLEKNVQ------LE 325
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 326 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 361
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 170 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFRE 229
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 230 EKCLY----CKKDVVVINLQNHE-ENLC 252
>gi|431890972|gb|ELK01851.1| TNF receptor-associated factor 4 [Pteropus alecto]
Length = 470
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 194 PCAYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKMAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSRRDLPVHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 122 SRRDLPVHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGMCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LTQHATSECPKRTQPCAY 197
>gi|66823835|ref|XP_645272.1| hypothetical protein DDB_G0272454 [Dictyostelium discoideum AX4]
gi|60473433|gb|EAL71379.1| hypothetical protein DDB_G0272454 [Dictyostelium discoideum AX4]
Length = 595
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDR 242
K+L +H L+C F + C C ++F+ ++ H++ C FK++ C Q C + ++++
Sbjct: 312 KDLEKHYLNCPFRPIEC--SFCKSEFTFYSIKDHETNCDFKLVECNQ-CKSQISKKELKY 368
Query: 243 HCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKN- 301
H C ++ +C F C T + + H ++ L H+ I+ K + + + +LK
Sbjct: 369 HLDENCPNQIISCTFGY--CDKTFERKELNNHLNETLAQHM--IMMKQQQQEEINLLKKE 424
Query: 302 ----------RVEELEKSYFDKLAEAPDVRSLSFAIKD-LEAK 333
+++ LEK +KL+E P ++ + + IK+ LE K
Sbjct: 425 FTNQLQLKDEKIKGLEKLIKEKLSE-PKIK-IDWKIKNYLECK 465
>gi|301753050|ref|XP_002912362.1| PREDICTED: TNF receptor-associated factor 4-like [Ailuropoda
melanoleuca]
Length = 469
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 193 PCTYCAKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKESCSTALVLCPFK 252
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 253 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 301
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C+ K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 116 CSTKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGA 172
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYA 259
+MRR + +H + C + C + A
Sbjct: 173 RMMRRLLAQHATSECPKRTQPCTYCA 198
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +C L RRD+ H C + C F G
Sbjct: 87 EGCRWSGPLRHLQSHLNTCSFNVIPCPNRCSTKLSRRDLPAHLQHDCPKRRLKCEF--CG 144
Query: 262 C 262
C
Sbjct: 145 C 145
>gi|291242393|ref|XP_002741093.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 530
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 31/123 (25%)
Query: 183 KELNEHMLHCGFISMICPNE-GCNAKFSAGHLEKH-DSVCPFKIIPCEQ----------- 229
KE ++H+ C +++ C N+ GC A +L +H D CP +I C+
Sbjct: 80 KEYDDHVTLCPHVTITCVNKIGCGASMKRSNLSEHLDKHCPMRITKCKYCTEQIPYREIK 139
Query: 230 -----------KC----PDTLMRRDMDRHCITV---CQMKLANCPFYAVGCQSTIPQCMI 271
KC DTL R+++ RH C MKL +C F +GC +P+ +
Sbjct: 140 EHNRVCDNYPVKCEYCNQDTLSRKELKRHQDPENGDCSMKLVHCSFKTIGCDVLLPRGSV 199
Query: 272 QQH 274
H
Sbjct: 200 HDH 202
>gi|281350540|gb|EFB26124.1| hypothetical protein PANDA_000106 [Ailuropoda melanoleuca]
Length = 457
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C L CPF
Sbjct: 181 PCTYCAKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKESCSTALVLCPFK 240
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 241 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 289
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C+ K S ++L H+ H C + C E C FS E H+ VCP + + CE KC
Sbjct: 104 CSTKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGA 160
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYA 259
+MRR + +H + C + C + A
Sbjct: 161 RMMRRLLAQHATSECPKRTQPCTYCA 186
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +C L RRD+ H C + C F G
Sbjct: 75 EGCRWSGPLRHLQSHLNTCSFNVIPCPNRCSTKLSRRDLPAHLQHDCPKRRLKCEF--CG 132
Query: 262 C 262
C
Sbjct: 133 C 133
>gi|441661343|ref|XP_003277186.2| PREDICTED: TNF receptor-associated factor 4 [Nomascus leucogenys]
Length = 526
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 144 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 201
Query: 262 C 262
C
Sbjct: 202 C 202
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 173 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 229
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 230 RMMRRLLAQHATSECPKRTQPCTY 253
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 250 PCTYCTKEFVFDTIQSHQYQCPRLPVSCPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 309
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + HL + + R + L+ L+ +EEL
Sbjct: 310 DSGCKHRCPKLAMARHVDESAKPHLAMMCALVSRQRQELQELRRELEEL 358
>gi|157819919|ref|NP_001100487.1| TNF receptor-associated factor 4 [Rattus norvegicus]
gi|149053499|gb|EDM05316.1| Tnf receptor associated factor 4 (predicted), isoform CRA_b [Rattus
norvegicus]
gi|171846891|gb|AAI62047.1| Tnf receptor associated factor 4 [Rattus norvegicus]
Length = 470
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C CPF
Sbjct: 194 PCAYCTKEFVYDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPTHLKDSCSTAFVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 ESGCKHRCPKLAMGRHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCAY 197
>gi|397486256|ref|XP_003814246.1| PREDICTED: TNF receptor-associated factor 5 isoform 4 [Pan
paniscus]
Length = 568
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 38/183 (20%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------------------------- 218
L +H+ C F ++ C NE C L++H S
Sbjct: 136 LQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHE 195
Query: 219 --VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+CP + C C +++ ++D H + VC +CPF GC T + +Q+H H
Sbjct: 196 ENLCPEYPVFCPNNCAKIILKTEVDEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEH 254
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
L H+ +L+K + L+ ++ +L KS K ++ ++ L+ IK LE +
Sbjct: 255 SALREHMRLVLEKNVQ------LEEQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQ 305
Query: 337 FKE 339
F +
Sbjct: 306 FAQ 308
>gi|31543889|ref|NP_033449.2| TNF receptor-associated factor 4 [Mus musculus]
gi|342187070|sp|Q61382.2|TRAF4_MOUSE RecName: Full=TNF receptor-associated factor 4; AltName:
Full=Cysteine-rich motif associated to RING and Traf
domains protein 1
gi|7274404|gb|AAF44757.1|AF233449_1 TNF receptor associated factor 4 [Mus musculus]
gi|26330396|dbj|BAC28928.1| unnamed protein product [Mus musculus]
gi|26334023|dbj|BAC30729.1| unnamed protein product [Mus musculus]
gi|26343851|dbj|BAC35582.1| unnamed protein product [Mus musculus]
gi|148680966|gb|EDL12913.1| Tnf receptor associated factor 4, isoform CRA_a [Mus musculus]
gi|162317890|gb|AAI56639.1| TNF receptor associated factor 4 [synthetic construct]
Length = 470
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C CPF
Sbjct: 194 PCAYCTKEFVYDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPTHLKDSCSTAFVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 ESGCKHRCPKLAMGRHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCAY 197
>gi|148225312|ref|NP_001086348.1| TNF receptor-associated factor 6-B [Xenopus laevis]
gi|82236068|sp|Q6DJN2.1|TRF6B_XENLA RecName: Full=TNF receptor-associated factor 6-B; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|49522101|gb|AAH75143.1| MGC81955 protein [Xenopus laevis]
Length = 556
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 185 LNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L +HM H CG + C N C + + H+ +CP + CE C L+R M H
Sbjct: 176 LEKHMEHECGRRKIFCDN--CGLAMAYEDMSGHELICPLAYVTCE-YCQTNLIREQMPSH 232
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
C M C +Y GC + + + +H D +H+ + Q L
Sbjct: 233 YSMDCTMAPIPCMYYEFGCTEKMQRNDLARHLQDFTQAHMRMMFQTL 279
>gi|149041056|gb|EDL95013.1| rCG20229 [Rattus norvegicus]
Length = 292
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV-- 219
+L +V KN CN + + +H+ HC F ++ CPN+ C +++H S
Sbjct: 103 VLNLHVYCKNAPGCNARIILGR-FQDHLQHCSFQAVPCPNQSCREAMLRKDVKEHLSAYC 161
Query: 220 --------------------------CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
CP + C KC T+ R + H +TVC
Sbjct: 162 RFREEKCLYCKRDIVVTNLQDHEENSCPAYPVSCPNKCVQTIPRAGVKEH-LTVCPEAEQ 220
Query: 254 NCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
+CPF GC + +Q+H L H+L +L+K
Sbjct: 221 DCPFKHYGCTVKGKRGNLQEHERAALQDHMLLVLEK 256
>gi|148680967|gb|EDL12914.1| Tnf receptor associated factor 4, isoform CRA_b [Mus musculus]
Length = 517
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C CPF
Sbjct: 241 PCAYCTKEFVYDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPTHLKDSCSTAFVLCPFK 300
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 301 ESGCKHRCPKLAMGRHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 349
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 169 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGVCPQESVYCENKCGARMMRRL 226
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 227 LAQHATSECPKRTQPCAY 244
>gi|288558690|dbj|BAI68387.1| TNF receptor-associated factor 6 [Plecoglossus altivelis altivelis]
gi|288558692|dbj|BAI68388.1| TNF receptor-associated factor 6 [Plecoglossus altivelis altivelis]
Length = 556
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 184 ELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDR 242
+L EH L C + CP+ C F E H CPF + C Q C L+R ++
Sbjct: 181 QLEEHTSLQCQQRPVSCPD--CVESFVYEESELHKQRCPFANVSC-QYCDMELIRDRLES 237
Query: 243 HCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHR 292
HC CQ CPF GC+ + + + QH + H+ Y+ + L R
Sbjct: 238 HCDMDCQKAPIACPFSMFGCRERMLRHDLAQHMQEFTQMHMHYMAEFLSR 287
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN+ C K HLE H + C F +PC C D + + ++ H CQ + +
Sbjct: 138 LTVRCPNKDCVEKMELRHLESHVNQCQFATVPCP-LCQDLVRKSQLEEHTSLQCQQRPVS 196
Query: 255 CP 256
CP
Sbjct: 197 CP 198
>gi|441613163|ref|XP_004088126.1| PREDICTED: TNF receptor-associated factor 5 [Nomascus leucogenys]
Length = 629
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 38/183 (20%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------------------------- 218
L +H+ C F ++ C NE C L++H S
Sbjct: 197 LQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHE 256
Query: 219 --VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+CP + C C +++ ++D H + VC +CPF GC T + +Q+H H
Sbjct: 257 ENLCPEYPVFCPNNCAKIILKTEVDEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEH 315
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
L H+ +L+K + L+ ++ +L KS K ++ ++ L+ IK LE +
Sbjct: 316 SALREHMRLVLEKNVQ------LEEQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQ 366
Query: 337 FKE 339
F +
Sbjct: 367 FAQ 369
>gi|126332583|ref|XP_001362131.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Monodelphis
domestica]
Length = 540
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 8/164 (4%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDT 234
C++ F N ++ C + C N C A E HD CP + CE C
Sbjct: 165 CHLPFRKYLLHNHMVVECPRRQVSCVN--CAAPMPFEEKEFHDQNCPLATVFCE-YCSTM 221
Query: 235 LMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDK 294
L+R M H C + C F GC+ +P+ + +H +D +H+ + Q + +
Sbjct: 222 LIREQMPNHYDIDCPVAPIPCTFSTFGCREKMPRNHLARHLQEDTLAHMRMMAQAI-ENI 280
Query: 295 PLKVLKNRVEELEKSYFD--KLAEAPDVRSLSF--AIKDLEAKL 334
+ ++ + E S +D L P +F I+ LE++L
Sbjct: 281 SIAAFNPKLHQREASSYDTSPLPRTPYPGPQNFQETIQQLESRL 324
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPNEGC K HLE H + C F + C Q C + + H + C + +
Sbjct: 130 LTVKCPNEGCLLKMELRHLEDHQTHCEFALAECPQ-CHLPFRKYLLHNHMVVECPRRQVS 188
Query: 255 CPFYAVGCQSTIP 267
C V C + +P
Sbjct: 189 C----VNCAAPMP 197
>gi|443720387|gb|ELU10185.1| hypothetical protein CAPTEDRAFT_187359 [Capitella teleta]
Length = 431
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 193 GFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKL 252
F + C N C + EKHDS CP K+I C KC + R D+DRH + C M+
Sbjct: 96 SFAAARCINPNCTWTDVFKNYEKHDSECPHKLIACS-KCQQLVPRGDLDRHASSECPMRT 154
Query: 253 ANC 255
C
Sbjct: 155 TGC 157
>gi|224051754|ref|XP_002200611.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Taeniopygia
guttata]
Length = 567
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 201 NEGCNAKFSAGHLEKHDSV-CPFKIIPCEQK-CPDTLMRRDMDRHCITVCQMKLANCPFY 258
N+GC + S G L H C F+ +PC + C + ++R+D+ H C+ + C +
Sbjct: 120 NKGCKEQLSLGQLLMHLRTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKY- 178
Query: 259 AVGCQSTIPQCMIQQH 274
C+S +P M+Q+H
Sbjct: 179 ---CKSQVPMIMLQKH 191
>gi|332811855|ref|XP_001169919.2| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Pan
troglodytes]
Length = 632
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 38/183 (20%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------------------------- 218
L +H+ C F ++ C NE C L++H S
Sbjct: 200 LQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHE 259
Query: 219 --VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+CP + C C +++ ++D H + VC +CPF GC T + +Q+H H
Sbjct: 260 ENLCPEYPVFCPNNCAKIILKTEVDEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEH 318
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
L H+ +L+K + L+ ++ +L KS K ++ ++ L+ IK LE +
Sbjct: 319 SALREHMRLVLEKNVQ------LEEQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQ 369
Query: 337 FKE 339
F +
Sbjct: 370 FAQ 372
>gi|410051653|ref|XP_511363.3| PREDICTED: TNF receptor-associated factor 4 isoform 2 [Pan
troglodytes]
Length = 325
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 49 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 108
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 109 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 157
>gi|410986146|ref|XP_003999373.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Felis catus]
gi|410986148|ref|XP_003999374.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Felis catus]
Length = 558
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 39/201 (19%)
Query: 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------- 218
V KN CN K + +H+ C F ++ C NE C L++H S
Sbjct: 108 VYCKNAPSCNAKIILGR-YQDHLQQCPFQAVQCSNENCQKPVLRKDLKEHLSAYCQFREE 166
Query: 219 --------------------VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
+CP + C KC + R ++D H + VC +CPF
Sbjct: 167 KCLYCKKDVVVINLQNHEENLCPEYPVSCPNKCLQMIPRSEVDEH-LVVCPEAEQDCPFK 225
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAP 318
GC + + +H H L H+L +L+K + L+ ++ +L KS K ++
Sbjct: 226 HYGCTVKDKRGNLLEHEHSALRDHMLLVLEKNFQ------LEEQISDLYKSLEQKESK-- 277
Query: 319 DVRSLSFAIKDLEAKLGPFKE 339
++ L+ +K E + F +
Sbjct: 278 -IQQLAETVKKFEKEFKQFAQ 297
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N CNAK G + H CPF+ + C + C ++R+D+ H CQ +
Sbjct: 106 LYVYCKNAPSCNAKIILGRYQDHLQQCPFQAVQCSNENCQKPVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|345318363|ref|XP_001521136.2| PREDICTED: TNF receptor-associated factor 4-like, partial
[Ornithorhynchus anatinus]
Length = 276
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C +F ++ H CP +PC +C + R D+ H C CPF GC
Sbjct: 3 CTKEFVFDTIQNHQYQCPRFPLPCPNQCGTGAVAREDLPGHLKENCNTAPVLCPFKDAGC 62
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
+ P+ + +H D + HL + R + L+ L+ VEEL
Sbjct: 63 KHRCPKLAMSRHLEDSVKLHLGLTWALVSRQRQELQELRRDVEEL 107
>gi|345803832|ref|XP_003435114.1| PREDICTED: TNF receptor-associated factor 3 [Canis lupus
familiaris]
Length = 543
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ + C + C + ++RRD+ H C+
Sbjct: 113 LQIYCRNEGGGCTEQLTLGHLLVHLKNDCQFEELSCVRADCKEKVLRRDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQH 274
+ A CP C+S +P +Q+H
Sbjct: 173 REATCPH----CKSQVPMITLQKH 192
>gi|256820893|ref|YP_003142172.1| hypothetical protein Coch_2067 [Capnocytophaga ochracea DSM 7271]
gi|256582476|gb|ACU93611.1| hypothetical protein Coch_2067 [Capnocytophaga ochracea DSM 7271]
Length = 157
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 409 KDSDGDVKEGKFTEGKNNGRKVSEED-----RIHDEQNVNREGTIDGGKINNETRVNEEQ 463
KD K + E K N R+ +E R DEQ N+ T D K N + R +EQ
Sbjct: 31 KDEQKTNKRRRKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTN-KRRTKDEQ 89
Query: 464 KANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKI 523
K N+ + TK E+ + + + D K NK R + +K ++ R +E KTN R +E+K
Sbjct: 90 KTNK--RRTKDEQKTNKRRTKDEQKTNK-RRTKDEQKTNKRRTKDEQKTNKRRTKDEQKT 146
Query: 524 NA 525
N
Sbjct: 147 NK 148
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 422 EGKNNGRKVSEED-----RIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEK 476
E K N R+ +E R DEQ N+ T D K N + R +EQK N+ + TK E+
Sbjct: 33 EQKTNKRRRKDEQKTNKRRTKDEQKTNKRRTKDEQKTN-KRRTKDEQKTNK--RRTKDEQ 89
Query: 477 VSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINA-----EGKVNG 531
+ + + D K NK R + +K ++ R +E KTN R +E+K N E K N
Sbjct: 90 KTNKRRTKDEQKTNK-RRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNK 148
Query: 532 R 532
R
Sbjct: 149 R 149
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 435 RIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVR 494
R DEQ N+ D K N + R +EQK N+ + TK E+ + + + D K NK R
Sbjct: 29 RHKDEQKTNKRRRKDEQKTN-KRRTKDEQKTNK--RRTKDEQKTNKRRTKDEQKTNK-RR 84
Query: 495 ASEGRKVSEERNINEGKTNGVRVNEEEKINA-----EGKVNGR 532
+ +K ++ R +E KTN R +E+K N E K N R
Sbjct: 85 TKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKTNKR 127
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 422 EGKNNGRKVSEED-----RIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEK 476
E K N R+ +E R DEQ N+ T D K N+ R +EQK N+ + TK E+
Sbjct: 55 EQKTNKRRTKDEQKTNKRRTKDEQKTNKRRTKDEQKT-NKRRTKDEQKTNK--RRTKDEQ 111
Query: 477 VSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVR 516
+ + + D K NK R + +K ++ R +E KTN R
Sbjct: 112 KTNKRRTKDEQKTNK-RRTKDEQKTNKRRTKDEQKTNKRR 150
>gi|61372388|gb|AAX43834.1| TNF receptor-associated factor 4 [synthetic construct]
Length = 471
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY 197
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
>gi|296230195|ref|XP_002760602.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Callithrix
jacchus]
Length = 558
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C + C + ++R+DM H T CQ +
Sbjct: 106 LYVYCSNAPGCNAKLILGRYQDHLQQCLFQAVQCSNENCQEPVLRKDMKEHLSTYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C V C+ + +Q H ++LC
Sbjct: 166 EKC----VYCKKDVVVINLQNHE-ENLC 188
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K++ EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDMKEHLSTYCQFREEKCVY--CKKDVVVINLQNHEENLCPEYPVVCPNNCSKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
D H + VC +CPF GC + +Q+H L H+ +L+K
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVMDKRRNLQEHEQSALREHMRLVLEK 256
>gi|343959290|dbj|BAK63502.1| TNF receptor-associated factor 4 [Pan troglodytes]
Length = 470
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY 197
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTNEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
>gi|66803288|ref|XP_635487.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
gi|74851621|sp|Q54FD5.1|Y0931_DICDI RecName: Full=TNF receptor-associated factor family protein
DDB_G0290931
gi|60463805|gb|EAL61981.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
Length = 511
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 177 MKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLM 236
++ NS L EH CGF + C C+ LE H CP +I C Q C +
Sbjct: 202 LRLNS---LKEHENQCGFKLVKCEYCACDGIIQV-QLENHYDECPKFVIGCPQGCLNFFE 257
Query: 237 RRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLY---ILQKLHR- 292
R + H C C +Y GC+ + + +Q RH + +H L+ ++ KL
Sbjct: 258 RDQIKSHIENDCNNSTIQCKYYEYGCKVEMKRSELQ--RHLENVNHQLFMGKLIDKLSST 315
Query: 293 -DKPLKVLKNRVEELEKS 309
D+ +K+ + ++E+EKS
Sbjct: 316 LDQSMKIQELLLKEIEKS 333
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+L+ H+ +C F + C + GC+ L++H++ C FK++ CE D +++ ++ H
Sbjct: 178 QLDRHIQNCKFKFVKCSHIGCDRVLRLNSLKEHENQCGFKLVKCEYCACDGIIQVQLENH 237
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
CP + +GC PQ + D + SH+
Sbjct: 238 --------YDECPKFVIGC----PQGCLNFFERDQIKSHI 265
>gi|22027622|ref|NP_004286.2| TNF receptor-associated factor 4 [Homo sapiens]
gi|30580636|sp|Q9BUZ4.1|TRAF4_HUMAN RecName: Full=TNF receptor-associated factor 4; AltName:
Full=Cysteine-rich domain associated with RING and Traf
domains protein 1; AltName: Full=Metastatic lymph node
gene 62 protein; Short=MLN 62; AltName: Full=RING finger
protein 83
gi|12804687|gb|AAH01769.1| TNF receptor-associated factor 4 [Homo sapiens]
gi|83699689|gb|ABC40750.1| TNF receptor-associated factor 4 [Homo sapiens]
gi|119571523|gb|EAW51138.1| TNF receptor-associated factor 4, isoform CRA_a [Homo sapiens]
gi|119571524|gb|EAW51139.1| TNF receptor-associated factor 4, isoform CRA_a [Homo sapiens]
gi|123986039|gb|ABM83751.1| TNF receptor-associated factor 4 [synthetic construct]
gi|123998962|gb|ABM87070.1| TNF receptor-associated factor 4 [synthetic construct]
gi|261861618|dbj|BAI47331.1| TNF receptor-associated factor 4 [synthetic construct]
gi|410219282|gb|JAA06860.1| TNF receptor-associated factor 4 [Pan troglodytes]
gi|410249664|gb|JAA12799.1| TNF receptor-associated factor 4 [Pan troglodytes]
gi|410288470|gb|JAA22835.1| TNF receptor-associated factor 4 [Pan troglodytes]
gi|410329693|gb|JAA33793.1| TNF receptor-associated factor 4 [Pan troglodytes]
Length = 470
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY 197
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
>gi|426348925|ref|XP_004042072.1| PREDICTED: TNF receptor-associated factor 4 [Gorilla gorilla
gorilla]
Length = 470
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY 197
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
>gi|229057008|ref|ZP_04196402.1| hypothetical protein bcere0026_11240 [Bacillus cereus AH603]
gi|228720285|gb|EEL71861.1| hypothetical protein bcere0026_11240 [Bacillus cereus AH603]
Length = 299
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 428 RKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTG 487
+KV E+ ++ +++ V + ++ K E + EEQKA E KV + +K+ E+ KA +
Sbjct: 192 KKVEEQKKVEEQKKVEEQKKVEEQKKAEEQKKAEEQKAEEQKKVEEQKKIEEQKKAEEQK 251
Query: 488 KVNKEVRASEGRKVSEERNINE 509
K+ ++ + E +KV E++ I E
Sbjct: 252 KIEEQKKVEEQKKVEEQKKIEE 273
>gi|951277|emb|CAA56491.1| cystein rich domain associated to RING and TRAF protein [Homo
sapiens]
Length = 470
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MR + +H + C + C +
Sbjct: 174 RMMRGLLAQHATSECPKRTQPCTY 197
>gi|119571525|gb|EAW51140.1| TNF receptor-associated factor 4, isoform CRA_b [Homo sapiens]
gi|119571527|gb|EAW51142.1| TNF receptor-associated factor 4, isoform CRA_b [Homo sapiens]
Length = 477
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 95 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 152
Query: 262 C 262
C
Sbjct: 153 C 153
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 124 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 180
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 181 RMMRRLLAQHATSECPKRTQPCTY 204
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 201 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 260
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 261 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 309
>gi|410912387|ref|XP_003969671.1| PREDICTED: TNF receptor-associated factor 6-like [Takifugu
rubripes]
Length = 564
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 183 KELNEHMLHCGFISMICPN-------------------------EGCNAKFSAGHLEKHD 217
+ L +H+ HC F ++ CP+ C F E+H+
Sbjct: 155 RHLEDHLAHCQFATVPCPHCQQSVRKTILEEHMTAECRRRPVSCPDCIETFVYEERERHE 214
Query: 218 SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277
CPF + C C L+R M+ HC T C + C F GC+ + + + +H D
Sbjct: 215 QQCPFASVMCP-YCDMDLVRDQMESHCDTDCPIAPIACTFSLFGCKERMQRHDLARHMQD 273
Query: 278 DLCSHLLYI 286
H+ Y+
Sbjct: 274 FTQMHMHYM 282
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ C N GC K HLE H + C F +PC C ++ + ++ H C+ + +
Sbjct: 139 LTVRCSNPGCTGKMELRHLEDHLAHCQFATVPCPH-CQQSVRKTILEEHMTAECRRRPVS 197
Query: 255 CP 256
CP
Sbjct: 198 CP 199
>gi|363741321|ref|XP_003642477.1| PREDICTED: TNF receptor-associated factor 4 [Gallus gallus]
Length = 460
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL +L I I EGC HL+ H C F +IPC +C L R
Sbjct: 55 KIYPDPELEAQVLSLA-IRCIHSEEGCRWSGLIRHLQAHLGTCGFNVIPCPNRCSTKLSR 113
Query: 238 RDMDRHCITVCQMKLANCPFYAV--------GCQSTIPQ 268
RD+ +H C + C F A G Q T PQ
Sbjct: 114 RDLPQHLQHGCPKRRVQCEFCAGDFTGEAFEGHQGTCPQ 152
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 26/103 (25%)
Query: 183 KELNEHMLHCGFISMICPN--------------------------EGCNAKFSAGHLEKH 216
+ L H+ CGF + CPN E C F+ E H
Sbjct: 87 RHLQAHLGTCGFNVIPCPNRCSTKLSRRDLPQHLQHGCPKRRVQCEFCAGDFTGEAFEGH 146
Query: 217 DSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYA 259
CP + + CE KC +MRR + +H ++ C + C + A
Sbjct: 147 QGTCPQESVYCENKCGARMMRRLLSQHTLSECPKRTQPCTYCA 189
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C + R D+ H C + CPF
Sbjct: 184 PCTYCAKEFVFDTIQNHQYQCPRYPVPCPNQCGTPNIAREDVPTHLKESCSTAMLLCPFK 243
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEELEKS 309
GC+ P+ + +H + +HL + + R + + L+ +EEL S
Sbjct: 244 EAGCKHRCPKLAMGRHLEESTKAHLGMVCALVSRQRQEILELRRDMEELSVS 295
>gi|298204319|gb|ACY38049.2| TNF receptor-associated factor 6 a [Cyprinus carpio]
Length = 351
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 203 GCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
C F + + H+ +CPF CE C L+R + HC T C C F GC
Sbjct: 1 ACAGSFVYANKQIHEQICPFANTVCE-YCEMELIRDQLALHCDTDCLKAPVACTFSTFGC 59
Query: 263 QSTIPQCMIQQHRHDDLCSHLLYILQKL 290
+ +P+ + QH + H+ Y+ + L
Sbjct: 60 REKMPRNELAQHMQEFTQMHMRYMAEFL 87
>gi|410898708|ref|XP_003962839.1| PREDICTED: TNF receptor-associated factor 3-like isoform 2
[Takifugu rubripes]
Length = 580
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCP-DTLMRRD 239
KE+ EH+ C + C E C K L+KH ++VCP + C C +L R +
Sbjct: 172 KEIPEHLSWKCKYRETSC--EFCMTKMPLTELQKHKETVCPAFPVSCPNHCSLSSLPRSE 229
Query: 240 MDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK---------- 289
+ H C +CPF+ GC +++QH HL + ++
Sbjct: 230 LSSH-QHECPKAQVSCPFHGYGCTFKGLNQVMRQHESSSAAEHLRMMAKRNSALESKLDD 288
Query: 290 -----LHRDKPLKVLKNRVEELEKS 309
L R K L VL +RV ELE S
Sbjct: 289 VKGELLERFKVLPVLSSRVAELESS 313
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 203 GCNAKFSAGHLEKHDSVCPFKIIPCEQ-KCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
GC + + H + CPF +PC KC + +MR+++ H C+ + +C F
Sbjct: 136 GCQEQMRLQQIPDHLNTCPFFEVPCPLGKCKERMMRKEIPEHLSWKCKYRETSCEF---- 191
Query: 262 CQSTIPQCMIQQHR 275
C + +P +Q+H+
Sbjct: 192 CMTKMPLTELQKHK 205
>gi|348554665|ref|XP_003463146.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Cavia
porcellus]
Length = 542
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H + C F+ +PC + C + ++RRD+ H C+
Sbjct: 112 LQIYCRNEARGCAEQLTLGHLLVHLKNDCQFEELPCMRADCKERVLRRDLRDHVEKACKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQH 274
+ A C C+S +P +Q+H
Sbjct: 172 REATCSH----CKSQVPMITLQKH 191
>gi|323483468|ref|ZP_08088855.1| rhs family protein [Clostridium symbiosum WAL-14163]
gi|323403166|gb|EGA95477.1| rhs family protein [Clostridium symbiosum WAL-14163]
Length = 3471
Score = 44.7 bits (104), Expect = 0.13, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 366 GTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKN 425
G +G + S+ + + T+ E +K S+ K +E GK +E KD++ GK+
Sbjct: 65 GIESGVSDTSDGDRADRTENSAEPDKDSDTGKDSESGKSSEPGKDNE---------TGKD 115
Query: 426 NGR-KVSEEDRIHDEQNVNREGTIDG-GKINNETRVNEEQKANEPGKVTKGEKVSEEGKA 483
+G K E R + + G G GK + + NE K +EPGK ++ K E GK
Sbjct: 116 SGTGKEDEPGRDSEPGKEDEPGQDSGTGKEDEPGQDNEAGKEDEPGKDSEAGKEDEPGKD 175
Query: 484 NDTGKVNKEVRASEGRKVSE 503
++ GK ++ + SE K E
Sbjct: 176 SEAGKEDEPGKDSEPGKEDE 195
Score = 38.5 bits (88), Expect = 9.3, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 28/163 (17%)
Query: 336 PFKEDTVNRYSGEGKVNEEKKINEVKPD-GEGTINGEVNISEEGKINATDKVNEKEKISN 394
P K+ + S GK +E K NE D G G + SE GK + + + K
Sbjct: 88 PDKDSDTGKDSESGKSSEPGKDNETGKDSGTGKEDEPGRDSEPGKEDEPGQDSGTGKEDE 147
Query: 395 KSKPNEGGKGNEQEKDSDGDVKEGKFTE-GKNNGRKVSEEDRIHDEQNVNREGTIDGGKI 453
+ NE GK +E KDS+ GK E GK++ + GK
Sbjct: 148 PGQDNEAGKEDEPGKDSEA----GKEDEPGKDS----------------------EAGKE 181
Query: 454 NNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRAS 496
+ + +E K +EPGK ++ K E GK ++ GK ++ + S
Sbjct: 182 DEPGKDSEPGKEDEPGKDSEAGKEDEPGKDSEPGKEDEPAQDS 224
>gi|410898706|ref|XP_003962838.1| PREDICTED: TNF receptor-associated factor 3-like isoform 1
[Takifugu rubripes]
Length = 574
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCP-DTLMRRD 239
KE+ EH+ C + C E C K L+KH ++VCP + C C +L R +
Sbjct: 166 KEIPEHLSWKCKYRETSC--EFCMTKMPLTELQKHKETVCPAFPVSCPNHCSLSSLPRSE 223
Query: 240 MDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK---------- 289
+ H C +CPF+ GC +++QH HL + ++
Sbjct: 224 LSSH-QHECPKAQVSCPFHGYGCTFKGLNQVMRQHESSSAAEHLRMMAKRNSALESKLDD 282
Query: 290 -----LHRDKPLKVLKNRVEELEKS 309
L R K L VL +RV ELE S
Sbjct: 283 VKGELLERFKVLPVLSSRVAELESS 307
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 203 GCNAKFSAGHLEKHDSVCPFKIIPCEQ-KCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
GC + + H + CPF +PC KC + +MR+++ H C+ + +C F
Sbjct: 130 GCQEQMRLQQIPDHLNTCPFFEVPCPLGKCKERMMRKEIPEHLSWKCKYRETSCEF---- 185
Query: 262 CQSTIPQCMIQQHR 275
C + +P +Q+H+
Sbjct: 186 CMTKMPLTELQKHK 199
>gi|157427808|ref|NP_001098810.1| TNF receptor-associated factor 5 [Bos taurus]
gi|157278883|gb|AAI34495.1| TRAF5 protein [Bos taurus]
gi|296478843|tpg|DAA20958.1| TPA: TNF receptor-associated factor 5 [Bos taurus]
Length = 558
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 57/148 (38%), Gaps = 30/148 (20%)
Query: 170 KNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS----------- 218
KN CN K + +H+ HC F + C NE C L++H S
Sbjct: 111 KNAPRCNAKIILGR-YQDHLQHCLFQPVQCSNENCREPVLRKDLKEHLSAYCQFREEKCL 169
Query: 219 -----------------VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
+CP + C KC T+ R ++D H + VC +C F G
Sbjct: 170 YCKKDVVVINLQNHEENLCPDYPVSCPNKCLQTIPRTEVDEH-LAVCPEAEQDCAFKNYG 228
Query: 262 CQSTIPQCMIQQHRHDDLCSHLLYILQK 289
C + +Q+H L H+L +L+K
Sbjct: 229 CAVKDKRGNLQEHERSALRDHMLLVLEK 256
>gi|124295373|gb|ABN04154.1| tumor necrosis factor receptor-associated factor 6 [Branchiostoma
belcheri]
Length = 642
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
C N+G K +L+ H S C F + C +C DT R+D+ H C +L CP
Sbjct: 118 CSNKGRKEKIELTYLDSHLSTCNFAFVRCPLECGDTFWRKDIPEHLNNDCPRRLVKCPH- 176
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLL 284
C IP QQ H + C +++
Sbjct: 177 ---CFKEIP--FDQQESHLEECPNVV 197
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 42/205 (20%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-DSVCP---------FKIIPCEQK---- 230
L+ H+ C F + CP E C F + +H ++ CP FK IP +Q+
Sbjct: 132 LDSHLSTCNFAFVRCPLE-CGDTFWRKDIPEHLNNDCPRRLVKCPHCFKEIPFDQQESHL 190
Query: 231 --CPDT----------LMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDD 278
CP+ L M RH C C F VGC +++ +
Sbjct: 191 EECPNVVRPCKFCQQELTNEQMTRHVKNECPRAPVLCVFKPVGCN-------VEKMERRN 243
Query: 279 LCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLG--- 335
L HL Q +H L++L N +E L+ F +L D +SL ++DL + G
Sbjct: 244 LAEHLQEFTQ-VH----LRLLLNALEGLKDVRFHRLGTHSDPQSLPARMQDLAYEHGHNL 298
Query: 336 PFKEDTVNRYSGEGKVNEEKKINEV 360
P + + G++ +++ V
Sbjct: 299 PLLHEQQTLFLPPGQMAVASQVSHV 323
>gi|93278159|gb|ABF06558.1| TNF receptor-associated factor 6 [Bos taurus]
Length = 542
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 87/250 (34%), Gaps = 46/250 (18%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCE------------- 228
+ L EH HC F M CP C F HL H CP + +PCE
Sbjct: 147 RHLEEHQAHCEFALMSCPQ--CQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEI 204
Query: 229 --QKCP----------DTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
Q CP L+R M H C C F A GC + + + +H
Sbjct: 205 HEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNHLARHLQ 264
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEA-------PDVRSLSFAIKD 329
++ SH+ + Q + + L + V + +D + +V + I+
Sbjct: 265 ENTQSHMRMMAQAV---QTLSLAVAPVPQCTMPLYDSVPPTRPSSGRHSEVHNFQETIQQ 321
Query: 330 LEAKL----GPFKEDTVNRYSGEGKVNEEKKINEVKPDGEGTINGE----VNISEEGKIN 381
LE +L +E T + VNE K+ D I + + I + G
Sbjct: 322 LEGRLVXQDHQIRELTAKMETQSMYVNELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFG 381
Query: 382 ATDKVNEKEK 391
K E+EK
Sbjct: 382 MHLKSQEEEK 391
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 50/236 (21%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
ILL+N F + F +++E+ M+ C PNEGC K HLE+H + C
Sbjct: 112 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEEHQAHCE 157
Query: 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA-------------------NCPFYAVGC 262
F ++ C Q C + ++ H + C + NCP V C
Sbjct: 158 FALMSCPQ-CQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVIC 216
Query: 263 QSTIPQCMIQQH-RHDDL--------CSHLLY-ILQKLHRDKPLKVLKNRVEELEKSYFD 312
+ + +Q H DL C+ + +K+ R+ L ++E +S+
Sbjct: 217 EYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNH----LARHLQENTQSHMR 272
Query: 313 KLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEGKVNEEKKINEVKPDGEGTI 368
+A+A V++LS A+ + P + G+ +E E EG +
Sbjct: 273 MMAQA--VQTLSLAVAPVPQCTMPLYDSVPPTRPSSGRHSEVHNFQETIQQLEGRL 326
>gi|403284095|ref|XP_003933419.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 543
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC+ + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIYCRNESRGCSEQLTLGHLLVHLKNDCQFEELPCVRADCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P +Q+H D
Sbjct: 173 REATCSH----CKSQVPMITLQKHEDTD 196
>gi|405951022|gb|EKC18970.1| TNF receptor-associated factor 3 [Crassostrea gigas]
Length = 603
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 195 ISMICPN--EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKL 252
+S+ CPN EGC + ++++H C + IPC +C L+RRD+ H +C +
Sbjct: 115 LSVKCPNSKEGCQVIETLKNIQRHLDECQYVPIPCPNRCSHILLRRDIQEHLSHICHKRT 174
Query: 253 ANC 255
C
Sbjct: 175 LIC 177
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 183 KELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCPDTLMRRDM 240
+++ EH+ H C ++IC C+++ A +++H D CP ++ C C LMR +
Sbjct: 160 RDIQEHLSHICHKRTLIC--NQCSSEVLAEEMQEHEDDQCPMAMVQCPH-CAMELMREQL 216
Query: 241 DRHCITVCQMKLANCPFYAVGCQ-STIPQCMIQQHRHDDLCSHLLYILQKL 290
RH C + +C + +GC IP+ + +H ++L +H+ + Q L
Sbjct: 217 QRHYDHDCMRRSIDCVYSKLGCSVGKIPRSEMGKHIQENLHNHMQLMCQAL 267
>gi|410051651|ref|XP_003953135.1| PREDICTED: TNF receptor-associated factor 4 isoform 1 [Pan
troglodytes]
gi|119571526|gb|EAW51141.1| TNF receptor-associated factor 4, isoform CRA_c [Homo sapiens]
Length = 352
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 76 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 135
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 136 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 184
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ +CP + + CE KC +MRR
Sbjct: 4 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRL 61
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 62 LAQHATSECPKRTQPCTY 79
>gi|77736267|ref|NP_001029833.1| TNF receptor-associated factor 6 [Bos taurus]
gi|122146515|sp|Q3ZCC3.1|TRAF6_BOVIN RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|73587333|gb|AAI02523.1| TNF receptor-associated factor 6 [Bos taurus]
gi|83853856|gb|ABC47877.1| TNF receptor-associated factor 6 [Bos taurus]
gi|89357342|gb|ABD72516.1| TNF receptor-associated factor 6 [Bos taurus]
gi|296479725|tpg|DAA21840.1| TPA: TNF receptor-associated factor 6 [Bos taurus]
Length = 542
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 87/250 (34%), Gaps = 46/250 (18%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCE------------- 228
+ L EH HC F M CP C F HL H CP + +PCE
Sbjct: 147 RHLEEHQAHCEFALMSCPQ--CQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEI 204
Query: 229 --QKCP----------DTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
Q CP L+R M H C C F A GC + + + +H
Sbjct: 205 HEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNHLARHLQ 264
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEA-------PDVRSLSFAIKD 329
++ SH+ + Q + + L + V + +D + +V + I+
Sbjct: 265 ENTQSHMRMMAQAV---QTLSLAVAPVPQCTMPLYDSVPPTRPSSGRHSEVHNFQETIQQ 321
Query: 330 LEAKL----GPFKEDTVNRYSGEGKVNEEKKINEVKPDGEGTINGE----VNISEEGKIN 381
LE +L +E T + VNE K+ D I + + I + G
Sbjct: 322 LEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFG 381
Query: 382 ATDKVNEKEK 391
K E+EK
Sbjct: 382 MHLKSQEEEK 391
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 50/236 (21%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
ILL+N F + F +++E+ M+ C PNEGC K HLE+H + C
Sbjct: 112 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEEHQAHCE 157
Query: 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA-------------------NCPFYAVGC 262
F ++ C Q C + ++ H + C + NCP V C
Sbjct: 158 FALMSCPQ-CQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVIC 216
Query: 263 QSTIPQCMIQQH-RHDDL--------CSHLLY-ILQKLHRDKPLKVLKNRVEELEKSYFD 312
+ + +Q H DL C+ + +K+ R+ L ++E +S+
Sbjct: 217 EYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNH----LARHLQENTQSHMR 272
Query: 313 KLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEGKVNEEKKINEVKPDGEGTI 368
+A+A V++LS A+ + P + G+ +E E EG +
Sbjct: 273 MMAQA--VQTLSLAVAPVPQCTMPLYDSVPPTRPSSGRHSEVHNFQETIQQLEGRL 326
>gi|45387923|ref|NP_991325.1| TNF receptor-associated factor 4 [Danio rerio]
gi|32698426|emb|CAD89005.1| TRAF4 protein [Danio rerio]
gi|41944600|gb|AAH65969.1| Tnf receptor-associated factor 4a [Danio rerio]
Length = 470
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C++K + ++L EH+ H C + C E C ++F+ E H +CP + + CE KC
Sbjct: 117 CSVKL-TRRDLPEHLQHDCPKRKVKC--EFCGSEFTGEAYENHQGICPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H +T C + C +
Sbjct: 174 RMMRRLLSQHTMTECPKRTQPCKY 197
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
EGC L+ H S C F +IPC +C L RRD+ H C + C F
Sbjct: 88 EGCRWTGQMKQLQSHFSTCAFNVIPCPNRCSVKLTRRDLPEHLQHDCPKRKVKCEF 143
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P + C +F ++ H CP + C +C + R D+ H C L CPF
Sbjct: 194 PCKYCGKEFVYDTIQNHQYHCPRFPVQCPNQCGTPNIAREDLANHVKESCGSALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEELEKSY 310
GC+ P+ I +H + SHL + + R + + L+ +EEL S+
Sbjct: 254 EAGCKHRCPKMAIGRHLEESTKSHLTMMCSLVGRQRQEILELRREMEELSVSH 306
>gi|351700074|gb|EHB02993.1| TNF receptor-associated factor 6 [Heterocephalus glaber]
Length = 543
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 55/218 (25%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
ILL+N F + F +++E+ M+ C PNEGC K HLE H +C
Sbjct: 113 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEDHQVLCE 158
Query: 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLC- 280
F ++ C Q C + ++ H +T C + +C V C ++P ++ HD C
Sbjct: 159 FALVNCSQ-CQRPFQKCQLNIHILTDCPRRQVSC----VNCAVSMP--FEEKEIHDQNCP 211
Query: 281 --------SHLLYILQKL--HRD-----KPLKV---------------LKNRVEELEKSY 310
H + I +++ H D P+ L ++E +S+
Sbjct: 212 LANVICEYCHTMLIREQMPTHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSH 271
Query: 311 FDKLAEAPDVRSLSFAIKDLEAK-LGPFKEDTVNRYSG 347
LA+A V SL+ A+ + + L P+ ++ R S
Sbjct: 272 MRMLAQA--VHSLNLALTPVPPRDLLPYDAASLPRVSS 307
>gi|63034003|gb|AAY27978.1| tumor necrosis factor receptor associated factor 6 [Euprymna
scolopes]
Length = 555
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 199 CPN--EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
CPN GCN H+E+H CP+ C C L+R+D+D H C + C
Sbjct: 84 CPNRKSGCNTCLELKHIEEHAESCPYHYQFCPNNCLSQLLRKDLDDHLQEQCSKRSVLCS 143
Query: 257 F 257
F
Sbjct: 144 F 144
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 183 KELNEHML-HCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMD 241
K+L++H+ C S++C C +H+ +CP +++PC+ C + +MR +
Sbjct: 125 KDLDDHLQEQCSKRSVLC--SFCEESMLFESYGEHEIICPARMVPCDL-CKEDVMREKIA 181
Query: 242 RHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
H T C C F+ +GC I + +++H + HL
Sbjct: 182 EHVATTCPHATVKCCFFLLGCHKEIKREKMEKHMKSHVQKHL 223
>gi|340385412|ref|XP_003391204.1| PREDICTED: TNF receptor-associated factor 4-like [Amphimedon
queenslandica]
Length = 490
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 188 HMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQK---CPDTLMRRDMDRH- 243
H+ C + + C NEGCN K L H+ CP I+PCE C + ++R +++ H
Sbjct: 166 HLNKCPDLPIQCSNEGCNEKIPRRLLASHNETCPKAIVPCEYSNIGCNERIIREELEIHN 225
Query: 244 --------CITVCQMKLAN 254
+T QM+L N
Sbjct: 226 DEAITIHLQLTTRQMRLTN 244
>gi|390342845|ref|XP_789994.3| PREDICTED: TNF receptor-associated factor 6-A-like
[Strongylocentrotus purpuratus]
Length = 631
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CP + C +E H C ++ PC +C ++ RR +DRH C +L C +
Sbjct: 187 CPYQDCPDLLELRDIESHKESCSYRTEPCPNQCGASMRRRSIDRHVEKECPRRLIECTY- 245
Query: 259 AVGCQSTIPQCMIQQHRHDDLC 280
C+ P C Q+ RH C
Sbjct: 246 ---CRG--PLCFNQKERHHAEC 262
>gi|126313917|ref|XP_001368795.1| PREDICTED: TNF receptor-associated factor 4 [Monodelphis domestica]
Length = 470
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP IPC +C ++ R D++ H C CPF
Sbjct: 194 PCAYCTKEFVYDTIQNHQHQCPRYPIPCPNQCGMGSIPREDLNSHLKENCSTVPVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ VEEL
Sbjct: 254 DAGCKHRCPKLAMGRHMEESVKPHLAMMCALVSRQRQELQELRRDVEEL 302
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 32/121 (26%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFS----AGHL-----------------------EK 215
++L H+ CG+ + CPN CN K S HL E
Sbjct: 97 RQLQVHLSSCGYNVVACPNR-CNGKLSRRDLPSHLQHECPKRRLKCDFCGIDFTGEAFES 155
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
H+ VCP + + CE KC +MRR + +H + C + C + C IQ H+
Sbjct: 156 HEGVCPQESVYCENKCGARMMRRLLGQHMMAECPKRTQPCAY----CTKEFVYDTIQNHQ 211
Query: 276 H 276
H
Sbjct: 212 H 212
>gi|327278715|ref|XP_003224106.1| PREDICTED: TNF receptor-associated factor 3-like isoform 2 [Anolis
carolinensis]
Length = 542
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQ-KCPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + G L H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQIFCRNENKGCREQLTLGQLLTHLRNDCLFEELPCPRVDCKEKILRKDLPDHAEKTCKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ C + C+S +P MIQ+H D
Sbjct: 172 RETTCKY----CKSQVPIIMIQKHEDAD 195
>gi|403284093|ref|XP_003933418.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 568
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC+ + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIYCRNESRGCSEQLTLGHLLVHLKNDCQFEELPCVRADCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P +Q+H D
Sbjct: 173 REATCSH----CKSQVPMITLQKHEDTD 196
>gi|194374693|dbj|BAG62461.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY 197
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
>gi|304573444|gb|ADM45856.1| TNF receptor-associated factor 6 b [Cyprinus carpio]
Length = 543
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN GC+ K LEKH S C F + C Q C +++ + +D H C +L
Sbjct: 132 LTVRCPNVGCSDKMELRQLEKHLSQCKFATVQCPQ-CLESVRKSHLDEHKSEQCLQRLMT 190
Query: 255 CPFYA 259
CP A
Sbjct: 191 CPACA 195
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 197 MICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
M CP C F + + H+ +CPF CE C L+R + HC T C C
Sbjct: 189 MTCP--ACAGSFVYANKQIHEQICPFANTVCE-YCEMELIRDQLALHCDTDCLKAPVACT 245
Query: 257 FYAVGCQSTIPQCMIQQH 274
F GC +P+ + QH
Sbjct: 246 FSTFGCHVKMPRNELAQH 263
>gi|432950245|ref|XP_004084443.1| PREDICTED: TNF receptor-associated factor 3-like isoform 2 [Oryzias
latipes]
Length = 573
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 203 GCNAKFSAGHLEKHDSVCPFKIIPCEQ-KCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
GC + S + H +VCPF +PC KC + +MR+++ H C+ + + C F
Sbjct: 129 GCQEQMSLQQIPDHVNVCPFFEVPCPLGKCKERMMRKEIPEHLAWKCKYRESTCEF---- 184
Query: 262 CQSTIPQCMIQQHR 275
C++ +P +Q+H+
Sbjct: 185 CKNKMPLTELQKHK 198
>gi|448925802|gb|AGE49380.1| hypothetical protein ATCVCan0610SP_105L [Acanthocystis turfacea
Chlorella virus Can0610SP]
Length = 627
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 90/182 (49%), Gaps = 5/182 (2%)
Query: 331 EAKLGPFKEDTVNRYSGEGKVNEEKKINEVKPDGEGTINGEVNISEEGKINATDKVNEKE 390
+ K P T + S + K + +K++ + + + ++ E +E+ K++ K E+
Sbjct: 357 QQKKNPPSPGTQAKLSAQRKEADARKMSAQQKEADAKMSAERAEAEKRKLSVIRKEAERR 416
Query: 391 KISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGT-ID 449
K+S + K + K + Q+K++D + + + RK+S + + D + ++ + D
Sbjct: 417 KLSAQQKEADARKMSAQQKEADARKMSAQRKDA--DARKMSAQRKDADARKMSAQRKDAD 474
Query: 450 GGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASE--GRKVSEERNI 507
+++ + + NE K + + EK+S + + N+ +++ + RA E R++S +R
Sbjct: 475 ARQLSAQRKANELLKTKMSAQRKEAEKLSAQRRENERKRLSAQRRAQETAARQLSAQRKA 534
Query: 508 NE 509
NE
Sbjct: 535 NE 536
>gi|304573442|gb|ADM45855.1| TNF receptor-associated factor 6 b [Cyprinus carpio]
Length = 543
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN GC+ K LEKH S C F + C Q C +++ + +D H C +L
Sbjct: 132 LTVRCPNVGCSDKMELRQLEKHLSQCKFATVQCPQ-CLESVRKSHLDEHKSEQCLQRLMT 190
Query: 255 CPFYA 259
CP A
Sbjct: 191 CPACA 195
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 197 MICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
M CP C F + + H+ +CPF CE C L+R + HC T C C
Sbjct: 189 MTCP--ACAGSFVYANKQIHEQICPFANTVCE-YCEMELIRDQLALHCDTDCLKAPVACT 245
Query: 257 FYAVGCQSTIPQCMIQQH 274
F GC +P+ + QH
Sbjct: 246 FSTFGCHVKMPRNELAQH 263
>gi|3435256|gb|AAC32376.1| tumor necrosis factor receptor-associated factor 4A [Homo sapiens]
Length = 198
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
>gi|405973121|gb|EKC37852.1| TNF receptor-associated factor 3 [Crassostrea gigas]
Length = 581
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 121/318 (38%), Gaps = 53/318 (16%)
Query: 183 KELNEHMLHCGFISMICP--NEGCNAKFSAGHLEKHDSVCPFKIIPCE------------ 228
KEL +H+ C F + CP + GC G L H C + + C+
Sbjct: 133 KELEKHLTECWFEPLPCPYKDWGCQEPVLRGSLTDHRQTCQYTPVNCQFCGEQVPKLSLE 192
Query: 229 -----------QKCP-----DTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQ 272
CP D + R +M H C + C F +VGC P+ ++
Sbjct: 193 THKNETCNKIPIPCPFGCGIDPVPRNEMSTH-QESCPKRPVVCKFASVGCTFQGPEEELE 251
Query: 273 QHRHDDLCSHLLYILQKLHRDKPLKV-LKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLE 331
H + H+ K+ ++ ++ V+EL D + D++ I+D++
Sbjct: 252 LHERQNTEEHIQQATLKMADVDLYRIDIRKEVQELSVHRQDARQKVNDIKK---EIQDIK 308
Query: 332 AKLGPFKEDTVNRYSGEGKVNE----------EKKINEV-KPDGEGTINGEVNISEEGKI 380
L D V R + K++ EK++ EV KP+ + + ++NI+ E
Sbjct: 309 NML-----DDVRRQDRKRKIDMVDLTERIIRVEKQLEEVSKPEVQQRMTSDLNIARENVR 363
Query: 381 NATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQ 440
D+++ + K + +S G + D D+++ G R + R +
Sbjct: 364 KLKDRLD-RLKAAEESGGGATAVGTVEIPDPFADLQQQTRQLGLQEARLSELDIRFQILE 422
Query: 441 NVNREGTIDGGKINNETR 458
+N EG + KI N R
Sbjct: 423 TLNYEGVLI-WKITNYRR 439
>gi|432950243|ref|XP_004084442.1| PREDICTED: TNF receptor-associated factor 3-like isoform 1 [Oryzias
latipes]
Length = 592
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 203 GCNAKFSAGHLEKHDSVCPFKIIPCEQ-KCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
GC + S + H +VCPF +PC KC + +MR+++ H C+ + + C F
Sbjct: 148 GCQEQMSLQQIPDHVNVCPFFEVPCPLGKCKERMMRKEIPEHLAWKCKYRESTCEF---- 203
Query: 262 CQSTIPQCMIQQHR 275
C++ +P +Q+H+
Sbjct: 204 CKNKMPLTELQKHK 217
>gi|395853774|ref|XP_003799377.1| PREDICTED: TNF receptor-associated factor 3 isoform 3 [Otolemur
garnettii]
Length = 543
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIYCRNESKGCTEQLTLGHLLVHLKNDCQFEELPCVRADCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQH 274
+ A C C+S +P +Q+H
Sbjct: 173 REATCSH----CKSQVPMITLQKH 192
>gi|303287372|ref|XP_003062975.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455611|gb|EEH52914.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 318
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 45/162 (27%)
Query: 184 ELNEHMLHCGFISMICPN-----------EGCNAKFSAGHLEKHDSVCPFKIIPCE---- 228
++ +H CGF+++ICPN E C E H SVCP + +PCE
Sbjct: 117 DIQKHEERCGFVNVICPNSCCLPSTKWQPEACYVMMQRRFEEAHLSVCPRRKLPCEHCHK 176
Query: 229 -----------QKCPDTLMRRD----------MDRHCITVCQMKLANCPFYAVGCQSTIP 267
Q CP M+ + + H T C CP +GC P
Sbjct: 177 NIEFEEMRRHVQLCPAKPMKCEKCNEVMRSGQIPSHLSTTCPKVAVKCPV--LGCPEVHP 234
Query: 268 QCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRV-EELEK 308
+ + +H D + H ++ D+ +K++++R+ E+L+K
Sbjct: 235 REKLNEHMTDSMVQH-----AQITADR-MKIVEDRMKEQLQK 270
>gi|62865501|gb|AAY16990.1| TRAF4 variant 5 [Homo sapiens]
Length = 195
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
>gi|330805873|ref|XP_003290901.1| hypothetical protein DICPUDRAFT_38203 [Dictyostelium purpureum]
gi|325078939|gb|EGC32564.1| hypothetical protein DICPUDRAFT_38203 [Dictyostelium purpureum]
Length = 337
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L++H+ C I + C E C +L++H D+ C + C C L R+D+ H
Sbjct: 139 LDQHLKECDLIKVEC--ELCKENLLKVNLQRHLDTECLKADMTCN--CSLVLKRQDLQEH 194
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
TVC M +C + GC +P+C I H
Sbjct: 195 LSTVCSMHPVDCLYAKFGCTKKVPRCEIDDH 225
>gi|395543668|ref|XP_003773736.1| PREDICTED: TNF receptor-associated factor 6 [Sarcophilus harrisii]
Length = 530
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPNEGC K HLE H + C F ++ C Q C + + + H +T C + +
Sbjct: 130 LTVKCPNEGCLLKMELRHLEDHQTHCEFALVECSQ-CHLSFRKYLLHNHMLTECPRRQVS 188
Query: 255 CPFYAVGCQSTIP 267
C V C + +P
Sbjct: 189 C----VNCAAPMP 197
>gi|74181137|dbj|BAE27835.1| unnamed protein product [Mus musculus]
Length = 542
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQVYCRNEGRGCAEQLTLGHLLVHLKNECQFEELPCLRADCKEKVLRKDLRDHVEKACKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P MI+ +H+D
Sbjct: 172 REATCSH----CKSQVP--MIKLQKHED 193
>gi|114842403|ref|NP_001041671.1| TNF receptor-associated factor 3 isoform b [Mus musculus]
gi|74181231|dbj|BAE27866.1| unnamed protein product [Mus musculus]
Length = 542
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQVYCRNEGRGCAEQLTLGHLLVHLKNECQFEELPCLRADCKEKVLRKDLRDHVEKACKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P MI+ +H+D
Sbjct: 172 REATCSH----CKSQVP--MIKLQKHED 193
>gi|327278713|ref|XP_003224105.1| PREDICTED: TNF receptor-associated factor 3-like isoform 1 [Anolis
carolinensis]
Length = 567
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQ-KCPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + G L H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQIFCRNENKGCREQLTLGQLLTHLRNDCLFEELPCPRVDCKEKILRKDLPDHAEKTCKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ C + C+S +P MIQ+H D
Sbjct: 172 RETTCKY----CKSQVPIIMIQKHEDAD 195
>gi|301610388|ref|XP_002934728.1| PREDICTED: TNF receptor-associated factor 5-like [Xenopus
(Silurana) tropicalis]
Length = 561
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 30/151 (19%)
Query: 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKF----SAGHLEKHDSV--- 219
V KN C++K + EH+ C + +C N+GC+ + GHLE +
Sbjct: 107 VYCKNSPACDVKVMLGR-YQEHLGQCLYEMTLCSNDGCHDQMIRKELKGHLESECKLRQE 165
Query: 220 ---------------------CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
C +PC CP T R ++D+H + C C F
Sbjct: 166 ACIYCKQTMASINLTIHVGLYCQLYPVPCPNACPVTCPRAELDKH-LCECPEAELQCTFS 224
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
GC + + +++H L H+LY+L +
Sbjct: 225 NYGCNVMVKRGKVKEHEDTFLRDHMLYVLNR 255
>gi|355725869|gb|AES08690.1| TNF receptor-associated factor 4 [Mustela putorius furo]
Length = 241
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
EGC HL+ H + C F +IPC +CP L RRD+ H
Sbjct: 88 EGCRWSGPLRHLQSHLNACSFNVIPCPNRCPTKLSRRDLPAH 129
>gi|395729041|ref|XP_003775475.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Pongo
abelii]
Length = 557
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHERSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>gi|426237214|ref|XP_004012556.1| PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 4
[Ovis aries]
Length = 459
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
E C HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EACRWNGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAFESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCTY 197
>gi|695358|gb|AAA68195.1| CD40-associated protein [Homo sapiens]
Length = 543
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIYCRNESRGCAEQLTLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P +Q+H D
Sbjct: 173 REATCSH----CKSQVPMIALQKHEDTD 196
>gi|1488198|gb|AAC52710.1| TRAFamn [Mus musculus]
Length = 567
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQVYCRNEGRGCAEQLTLGHLLVHLKNECQFEELPCLRADCKEKVLRKDLRDHVEKACKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P MI+ +H+D
Sbjct: 172 REATCSH----CKSQVP--MIKLQKHED 193
>gi|426245316|ref|XP_004016459.1| PREDICTED: TNF receptor-associated factor 6 [Ovis aries]
Length = 542
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 28/134 (20%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCE------------- 228
+ L EH HC F M CP C F HL H CP + +PCE
Sbjct: 147 RHLEEHQAHCEFALMSCPQ--CQRLFQKCHLNFHILKECPRRQVPCENCAVLMAFEDKEI 204
Query: 229 --QKCP----------DTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
Q CP L+R M H C C F A GC + + + +H
Sbjct: 205 HEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNHLARHLQ 264
Query: 277 DDLCSHLLYILQKL 290
++ SH+ + Q +
Sbjct: 265 ENTQSHMRMMAQAV 278
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
ILL+N F + F +++E+ M+ C PNEGC K HLE+H + C
Sbjct: 112 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEEHQAHCE 157
Query: 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANC 255
F ++ C Q C + ++ H + C + C
Sbjct: 158 FALMSCPQ-CQRLFQKCHLNFHILKECPRRQVPC 190
>gi|426378102|ref|XP_004055783.1| PREDICTED: TNF receptor-associated factor 3 isoform 3 [Gorilla
gorilla gorilla]
Length = 543
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIYCRNESRGCAEQLTLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P +Q+H D
Sbjct: 173 REATCSH----CKSQVPMIALQKHEDTD 196
>gi|296215937|ref|XP_002754342.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Callithrix
jacchus]
Length = 568
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIYCRNESRGCAEQLTLGHLLVHLKNDCQFEELPCVRTDCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P +Q+H D
Sbjct: 173 REATCSH----CKSQVPMITLQKHEDTD 196
>gi|440910080|gb|ELR59912.1| TNF receptor-associated factor 6 [Bos grunniens mutus]
Length = 542
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 70/212 (33%), Gaps = 58/212 (27%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCE------------- 228
+ L EH HC F M CP C F HL H CP + +PCE
Sbjct: 147 RHLEEHQAHCEFALMSCPQ--CQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEI 204
Query: 229 --QKCP----------DTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
Q CP L+R M H C C F A GC
Sbjct: 205 HEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCH------------- 251
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
+K+ R+ L ++E +S+ +A+A V++LS A+ + P
Sbjct: 252 -----------EKMQRNH----LACHLQENTQSHMRMMAQA--VQTLSLAVAPVPQCTMP 294
Query: 337 FKEDTVNRYSGEGKVNEEKKINEVKPDGEGTI 368
+ G+ +E E EG +
Sbjct: 295 LYDSVPPTRPSSGRHSEVHNFQETIQQLEGRL 326
>gi|145352185|ref|XP_001420435.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580669|gb|ABO98728.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 800
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 3/132 (2%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHC 244
++ H C F CP+ C+A +A H H C PC +C + R D H
Sbjct: 321 IDSHRTDCDFRPWHCPS--CDAVVNAMHASIHAVKCEESRRPC-PRCRAMVRTRAFDAHQ 377
Query: 245 ITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVE 304
C C F A GC + ++ H D HL +++ L ++ K++V
Sbjct: 378 EFFCVGASKPCAFAAFGCLEVGAETELRAHERDAAPRHLRLVVKALEAERSSGRKKSKVI 437
Query: 305 ELEKSYFDKLAE 316
E + +K E
Sbjct: 438 ERMEQALNKFGE 449
>gi|351703425|gb|EHB06344.1| TNF receptor-associated factor 5 [Heterocephalus glaber]
Length = 581
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 29/131 (22%)
Query: 187 EHMLHCGFISMICPNEGCNAKFSAGHLEKHDS---------------------------- 218
+H+ C F ++ C N+ C L++H S
Sbjct: 150 DHLQQCLFQAIPCSNQNCQEAVLRRDLQEHLSTSCQFREEKCLYCKKDVVVVSLQNHEEN 209
Query: 219 VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+CP + C KC + R ++D H + VC +CPF GC + +Q+H
Sbjct: 210 LCPEYPVSCPNKCSQIIPRTEVDEH-LAVCPEAEQDCPFKPYGCAVQGKRGNLQEHGQSA 268
Query: 279 LCSHLLYILQK 289
L H+L +L+K
Sbjct: 269 LREHMLLVLEK 279
>gi|114842405|ref|NP_035762.2| TNF receptor-associated factor 3 isoform a [Mus musculus]
gi|342187069|sp|Q60803.2|TRAF3_MOUSE RecName: Full=TNF receptor-associated factor 3; AltName: Full=CD40
receptor-associated factor 1; Short=CRAF1; AltName:
Full=TRAFAMN
gi|148686695|gb|EDL18642.1| Tnf receptor-associated factor 3 [Mus musculus]
gi|187951741|gb|AAI37636.1| TNF receptor-associated factor 3 [Mus musculus]
gi|187953645|gb|AAI37635.1| TNF receptor-associated factor 3 [Mus musculus]
Length = 567
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQVYCRNEGRGCAEQLTLGHLLVHLKNECQFEELPCLRADCKEKVLRKDLRDHVEKACKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P MI+ +H+D
Sbjct: 172 REATCSH----CKSQVP--MIKLQKHED 193
>gi|119602203|gb|EAW81797.1| TNF receptor-associated factor 3, isoform CRA_b [Homo sapiens]
Length = 543
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIYCRNESRGCAEQLTLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P +Q+H D
Sbjct: 173 REATCSH----CKSQVPMIALQKHEDTD 196
>gi|37650544|emb|CAE51070.1| TNF receptor associated factor 5 [Sus scrofa]
Length = 264
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 35/191 (18%)
Query: 186 NEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS--------------------------- 218
+H+ C F ++ C NE C L++H S
Sbjct: 75 QDHLQQCLFQAVQCCNERCQEPVLRKDLKEHASTYCQFREEKCLYCKKDVVVINLQNHEE 134
Query: 219 -VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277
+CP + C KC + R ++D H + VC +CPF GC + +Q+H H
Sbjct: 135 NLCPEYPVSCPNKCLQMIPRTEVDEH-LAVCPEAEQDCPFKHYGCMVKEKRGHLQEHEHS 193
Query: 278 DLCSHLLYILQK-LHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
L H+L +L+K L ++ + L +E+ E S +LAE V+ K L G
Sbjct: 194 ALRDHMLLVLEKNLQLEEQISDLYKSLEQKE-SKIQQLAET--VKKFEKEFKQLAQLXG- 249
Query: 337 FKEDTVNRYSG 347
K T + Y G
Sbjct: 250 -KNGTXSXYXG 259
>gi|719293|gb|AAC52175.1| CD40 receptor associated factor 1 [Mus musculus]
gi|1095178|prf||2107334A CRAF1 gene
Length = 567
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQVYCRNEGRGCAEQLTLGHLLVHLKNECQFEELPCLRADCKEKVLRKDLRDHVEKACKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P MI+ +H+D
Sbjct: 172 REATCSH----CKSQVP--MIKLQKHED 193
>gi|47716905|gb|AAT37634.1| TNF-receptor associated factor 6 [Danio rerio]
Length = 542
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 185 LNEH-MLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L+EH HC M CP+ C F + H+ CPF CE C L+R + H
Sbjct: 175 LDEHKSQHCLQRIMTCPD--CAGSFVYAVKQSHEQFCPFANTVCE-YCEMELIRDQLALH 231
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
C T C C F GC+ + + + QH + H+ Y+ + L
Sbjct: 232 CDTDCLKAPVACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFL 278
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ C N GC+ K LEKH S C F PC Q C +++ +D H C ++
Sbjct: 131 LTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQ-CQESVPMSHLDEHKSQHCLQRIMT 189
Query: 255 CP 256
CP
Sbjct: 190 CP 191
>gi|115605763|gb|ABJ15863.1| TNF receptor-associated factor 6 [Gasterosteus aculeatus]
Length = 576
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN C K HLE H C F +PC Q C + + ++ H CQ + +
Sbjct: 142 LTVRCPNSDCADKMELRHLENHLGRCQFATVPCSQ-CQQAVRKSRLEEHQTAECQKRPVS 200
Query: 255 CP 256
CP
Sbjct: 201 CP 202
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CP+ C A F + H CPF I+ C C L+R ++ HC T C C F
Sbjct: 201 CPD--CVASFFYEERKLHQQRCPFAIVKC-LFCDLELIRDQIESHCDTDCPKAPIACNFS 257
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
A GC+ ++ + + QH + H+ Y+ + L
Sbjct: 258 AFGCKESMQRHNLAQHMQEFTQMHMRYMAEFL 289
>gi|449280670|gb|EMC87906.1| TNF receptor-associated factor 3 [Columba livia]
Length = 567
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 201 NEGCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQMKLANCPFY 258
N+GC + S G L H + C F+ + C + C + ++R+D+ H C+ + C +
Sbjct: 120 NKGCKEQLSLGQLLMHLKTDCQFEELSCPRADCKEKILRKDLPDHVEKTCKYRETTCKY- 178
Query: 259 AVGCQSTIPQCMIQQHRHDD 278
C+S +P M+Q+H D
Sbjct: 179 ---CKSQVPMIMLQKHEDTD 195
>gi|348539592|ref|XP_003457273.1| PREDICTED: TNF receptor-associated factor 3-like [Oreochromis
niloticus]
Length = 584
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 203 GCNAKFSAGHLEKHDSVCPFKIIPCEQ-KCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
GC + S + H +VCPF +PC KC + +MR+++ H C+ + C F
Sbjct: 139 GCQEQMSLQQIPDHLNVCPFFEVPCPLGKCKERMMRKEIPDHLSWKCKQRETTCEF---- 194
Query: 262 CQSTIPQCMIQQHRHDDLC 280
C + +P +Q+H+ D +C
Sbjct: 195 CSTKMPLTDLQKHK-DTVC 212
>gi|326920354|ref|XP_003206439.1| PREDICTED: TNF receptor-associated factor 6-like [Meleagris
gallopavo]
Length = 524
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 48/143 (33%), Gaps = 46/143 (32%)
Query: 162 ILLKNVDFKNEFH---------------CNMKFNSEKELNEHMLHCGFISMICPNEGCNA 206
ILL+N F + F C MK + L EH LHC F ++ CP C
Sbjct: 111 ILLENQLFPDNFAKREILSLTVKCPNKGCCMKMEL-RHLEEHQLHCDFTAVECPQ--CQG 167
Query: 207 KFSAGHL---------------------------EKHDSVCPFKIIPCEQKCPDTLMRRD 239
F HL E HD CP + CE C L+R+
Sbjct: 168 AFQKNHLKEHMTQECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCE-YCNTMLIRQQ 226
Query: 240 MDRHCITVCQMKLANCPFYAVGC 262
M H C C + A GC
Sbjct: 227 MPNHYDNDCPTAPVPCFYSAFGC 249
>gi|32766399|gb|AAH55214.1| TNF receptor-associated factor 6 [Danio rerio]
Length = 542
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 185 LNEH-MLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L+EH HC M CP+ C F + H+ CPF CE C L+R + H
Sbjct: 175 LDEHKSQHCLQRIMTCPD--CAGSFVYAVKQNHEQFCPFANTVCE-YCEMELIRDQLALH 231
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
C T C C F GC+ + + + QH + H+ Y+ + L
Sbjct: 232 CDTDCLKAPVACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFL 278
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ C N GC+ K LEKH S C F PC Q C +++ +D H C ++
Sbjct: 131 LTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQ-CQESVPISHLDEHKSQHCLQRIMT 189
Query: 255 CP 256
CP
Sbjct: 190 CP 191
>gi|40019235|emb|CAE88928.1| TNF-receptor-associated factor 1 [Hydractinia echinata]
Length = 409
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 29/106 (27%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCPDTLMRRDMD-- 241
+ +H+ C + ++CPNE C F L H S C F+++ C Q C + + +D+
Sbjct: 111 VEDHLKSCPYADILCPNEQCQDSFPRRALSHHLASRCKFRVLTC-QFCKEKYIYKDVKSH 169
Query: 242 -RHC------------------------ITVCQMKLANCPFYAVGC 262
+HC IT C + + CP++ +GC
Sbjct: 170 MKHCKRLPLECVNKCGVKDIPRDEMTNHITECPLSVLPCPYHDIGC 215
>gi|595911|gb|AAA56753.1| CD40 binding protein [Homo sapiens]
Length = 567
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKHDSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQMK 251
+ + C NE GC + GHL + C F+ +PC + C + ++R+D+ H C+ +
Sbjct: 113 LQIYCRNESRGCAEQLMLGHLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYR 172
Query: 252 LANCPFYAVGCQSTIPQCMIQQHRHDD 278
A C C+S +P +Q+H D
Sbjct: 173 EATCSH----CKSQVPMIALQKHEDTD 195
>gi|113674095|ref|NP_001038217.1| TNF receptor-associated factor 6 [Danio rerio]
gi|288559206|sp|Q6IWL4.2|TRAF6_DANRE RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|213625859|gb|AAI71483.1| TNF receptor-associated factor 6 [Danio rerio]
gi|213627514|gb|AAI71487.1| TNF receptor-associated factor 6 [Danio rerio]
Length = 542
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 185 LNEH-MLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L+EH HC M CP+ C F + H+ CPF CE C L+R + H
Sbjct: 175 LDEHKSQHCLQRIMTCPD--CAGSFVYAVKQNHEQFCPFANTVCE-YCEMELIRDQLALH 231
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
C T C C F GC+ + + + QH + H+ Y+ + L
Sbjct: 232 CDTDCLKAPVACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFL 278
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ C N GC+ K LEKH S C F PC Q C +++ +D H C ++
Sbjct: 131 LTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQ-CQESVPISHLDEHKSQHCLQRIMT 189
Query: 255 CP 256
CP
Sbjct: 190 CP 191
>gi|270013417|gb|EFA09865.1| hypothetical protein TcasGA2_TC012013 [Tribolium castaneum]
Length = 2479
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 31/165 (18%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCE----- 228
CN +F H+ +CG+ + C N+ C K + HL +H S C +++PC
Sbjct: 146 CNKEFTG-LVFENHVGNCGYEPLYCENK-CGVKVARRHLSQHKVSECSKRLLPCRFCSKE 203
Query: 229 -----------------QKCPD-----TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTI 266
CP+ L + D++ H C + + +C + GC+
Sbjct: 204 FVADTLSAHHLKCGRVPVACPNRCDVNVLAKEDLETHLKEECTVSVLSCTYKDAGCRFKG 263
Query: 267 PQCMIQQHRHDDLCSHLLYILQKLHRDK-PLKVLKNRVEELEKSY 310
P+ ++++H + HL + + + + + LKN + L +Y
Sbjct: 264 PRYLMEKHLEESSQQHLALVCTVVTKQQHQITSLKNALSRLSLNY 308
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 181 SEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDM 240
SEK + +++C I EGC L+ H + C IPC KC + R M
Sbjct: 74 SEKAIMSSVVYC-----IHHKEGCKWSDELRKLKAHLNSCKHDAIPCTGKCGAQIPRVIM 128
Query: 241 DRHCITVCQMKLANCPF 257
D H T C + A C F
Sbjct: 129 DEHLKTTCPQRRARCQF 145
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 199 CPN-----EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
CP + CN +F+ E H C ++ + CE KC + RR + +H ++ C +L
Sbjct: 136 CPQRRARCQFCNKEFTGLVFENHVGNCGYEPLYCENKCGVKVARRHLSQHKVSECSKRLL 195
Query: 254 NCPF 257
C F
Sbjct: 196 PCRF 199
>gi|149409636|ref|XP_001509071.1| PREDICTED: TNF receptor-associated factor 6-like [Ornithorhynchus
anatinus]
Length = 544
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 12/130 (9%)
Query: 214 EKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273
E HD CP + CE C L+R M H C C F + GC+ + + + +
Sbjct: 202 EYHDQNCPLASVFCE-YCSTVLIREQMPTHYDMDCPTAPIPCTFSSFGCREKMQRNQLAR 260
Query: 274 HRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEA---------PDVRSLS 324
H DD +H+ + Q LH + V +L+ FD + P+V++
Sbjct: 261 HLQDDTQAHMRMMAQALHSISITAL--TPVPQLDVLPFDPASLPRSSSGYDCHPEVQNFQ 318
Query: 325 FAIKDLEAKL 334
I+ LE +L
Sbjct: 319 ETIQQLEGRL 328
>gi|297662063|ref|XP_002809541.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Pongo
abelii]
Length = 621
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 215 KDLKEHLSAYCQFREEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 272
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +Q+H L H+ +L+K + L+
Sbjct: 273 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHERSALREHMRLVLEKNVQ------LE 325
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 326 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 361
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 170 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFRE 229
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 230 EKCLY----CKKDVVVINLQNHE-ENLC 252
>gi|395536184|ref|XP_003770100.1| PREDICTED: TNF receptor-associated factor 4 [Sarcophilus harrisii]
Length = 370
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C+ +F ++ H CP +PC +C ++ R D+ H C CPF
Sbjct: 94 PCAYCSKEFVFDTIQNHQHQCPRYPVPCPNQCGMGSIPREDLPSHLKENCSTAPVLCPFK 153
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L L+ VEEL
Sbjct: 154 DAGCKHRCPKLAMGRHMEESVKLHLAMMCALVSRQRQELLELRRDVEEL 202
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 27/109 (24%)
Query: 199 CPNEGCNAK-----FSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVC----- 248
C GC A S E H+ VCP + + CE KC +MRR + +H +T C
Sbjct: 34 CLGPGCQAHQAFVLTSRPAYESHEGVCPQESVYCENKCGARMMRRLLSQHMMTECPKRTQ 93
Query: 249 --------------QMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
Q CP Y V C + QC + +DL SHL
Sbjct: 94 PCAYCSKEFVFDTIQNHQHQCPRYPVPCPN---QCGMGSIPREDLPSHL 139
>gi|395844238|ref|XP_003794869.1| PREDICTED: TNF receptor-associated factor 2 [Otolemur garnettii]
Length = 490
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQ 263
C A S ++ H VCP + CE + R H I C C F+ VGCQ
Sbjct: 155 CRAPCSGTDVKAHHEVCPKFPLTCEGCGKKKISREKFQDH-IKTCGKCRVPCRFHTVGCQ 213
Query: 264 STIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL 296
T+ Q Q+H L HL +L + KPL
Sbjct: 214 ETVEQEKQQEHEAQWLQGHLAMLLSSVLEAKPL 246
>gi|47227801|emb|CAG08964.1| unnamed protein product [Tetraodon nigroviridis]
Length = 471
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P + C +F ++ H CP + C +C + R D+ H C L CPF
Sbjct: 195 PCKYCGKEFVFDTIQNHQYHCPRFPVQCPNQCGTPNIAREDLANHVKDNCGSALVLCPFK 254
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEELEKSY 310
GC+ P+ I +H D SHL + + R + + L+ +EEL S+
Sbjct: 255 DAGCKHRCPKLAIGRHLEDTTKSHLTMMCNLVGRQRQEILELRREMEELSVSH 307
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL + +L I I EGC L+ H S C F +IPC +C L R
Sbjct: 66 KIYPDPELEQQILALA-IRCIHSEEGCRWTGQMKQLQGHFSTCAFNVIPCPNRCSVKLTR 124
Query: 238 RDMDRHCITVCQMKLANCPF 257
RD+ H C + C F
Sbjct: 125 RDLPDHLQHDCPKRKVKCEF 144
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C++K + ++L +H+ H C + C E C ++F+ E H VCP + + CE KC
Sbjct: 118 CSVKL-TRRDLPDHLQHDCPKRKVKC--EFCGSEFTGEAYENHQGVCPQESVYCENKCGA 174
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 175 RMMRRLLSQHGMAECPKRTQPCKY 198
>gi|345803830|ref|XP_003435113.1| PREDICTED: TNF receptor-associated factor 3 [Canis lupus
familiaris]
Length = 485
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ + C + C + ++RRD+ H C+
Sbjct: 113 LQIYCRNEGGGCTEQLTLGHLLVHLKNDCQFEELSCVRADCKEKVLRRDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQ 272
+ A CP C+S +P +Q
Sbjct: 173 REATCPH----CKSQVPMITLQ 190
>gi|32565349|ref|NP_499773.2| Protein TRF-1 [Caenorhabditis elegans]
gi|13650033|gb|AAK37546.1|AF348168_1 TRF-1 [Caenorhabditis elegans]
gi|54110953|emb|CAB07615.2| Protein TRF-1 [Caenorhabditis elegans]
Length = 462
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 6/129 (4%)
Query: 161 HILLKNVDFKNEFHCNM--KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS 218
H L FK+ C + ++ +L +H C +C CN E+H
Sbjct: 97 HDHLSECTFKSSLKCEKCGRQFAKNDLEKHRAKCELNRAVC--SFCNKTIRDSDRERHPK 154
Query: 219 VCPFKIIPCEQKCPDT-LMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277
CP II C +C T R +++ HC + C CPF GC + IQQH D
Sbjct: 155 TCPQVIISCPFQCGLTDRPRLEIEAHCPS-CPNVDNVCPFVPYGCTFAGGKESIQQHLSD 213
Query: 278 DLCSHLLYI 286
+ HL+Y+
Sbjct: 214 EPVRHLMYL 222
>gi|303284120|ref|XP_003061351.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457702|gb|EEH55001.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 519
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 202 EGCNAKFSAGHLEKHDSV-CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAV 260
E C A S + +H+ + C + PC +C + R +D H +C L +CPF ++
Sbjct: 336 ERCRAIVSLRSVAEHEKLRCVAAVEPCPLRCGMVVSRGALDEHVKNLCVRTLVDCPFKSL 395
Query: 261 GCQSTIPQCMIQQH 274
GC +TI + ++ H
Sbjct: 396 GCHTTIERGRLEAH 409
>gi|148680968|gb|EDL12915.1| Tnf receptor associated factor 4, isoform CRA_c [Mus musculus]
Length = 368
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
EGC HL+ H + C F ++PC +CP L RRD+ H
Sbjct: 113 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAH 154
>gi|111219452|ref|XP_001134485.1| TRAF-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|122108277|sp|Q1ZXR0.1|Y8444_DICDI RecName: Full=TNF receptor-associated factor family protein
DDB_G0268444
gi|90970915|gb|EAS66947.1| TRAF-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 502
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 31/122 (25%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-----------------DSV------- 219
E+ +H+ C F + C GCN +EKH D +
Sbjct: 126 EIEKHLKQCKFTHIKCKFIGCNKIIRLNQVEKHEKEQCEFRLEYCRYCDTDGITSRSLEN 185
Query: 220 ----CPFKIIPC-EQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQST--IPQCMIQ 272
CP I+ C E C L R ++ H CQM + +CP+ GC+ + P+ +
Sbjct: 186 HYKECPKFIVKCSENGCTVQLERSQLESHIEKQCQMVMIDCPYKIYGCEQSNRFPKSNLT 245
Query: 273 QH 274
QH
Sbjct: 246 QH 247
>gi|432889801|ref|XP_004075368.1| PREDICTED: TNF receptor-associated factor 4-like [Oryzias latipes]
Length = 470
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P + C +F ++ H CP + C +C + R D+ H C L CPF
Sbjct: 194 PCKYCGKEFVFDTIQNHQFHCPRFPVQCPNQCGTPNIAREDLANHVKDNCGSALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEELEKSY 310
GC+ P+ I +H D SHL + + R + + L+ +EEL S+
Sbjct: 254 DAGCKHRCPKLAIGRHLEDTTKSHLTMMCNLVSRQRQEILELRREMEELSVSH 306
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C++K + ++L +H+ H C + C E C ++F+ E H VCP + + CE KC
Sbjct: 117 CSVKL-TRRDLPDHLQHDCPKRKVKC--EFCGSEFTGEAFENHQGVCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLSQHGMAECPKRTQPCKY 197
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL + +L I I EGC L+ H S C F +IPC +C L R
Sbjct: 65 KIYPDPELEQQILSLP-IRCIHSEEGCRWTGQMKQLQGHFSTCAFNVIPCPNRCSVKLTR 123
Query: 238 RDMDRHCITVCQMKLANCPF 257
RD+ H C + C F
Sbjct: 124 RDLPDHLQHDCPKRKVKCEF 143
>gi|66803138|ref|XP_635412.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
gi|74851612|sp|Q54FC5.1|Y0965_DICDI RecName: Full=TNF receptor-associated factor family protein
DDB_G0290965
gi|60463735|gb|EAL61913.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
Length = 575
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+L+ H+ +C F + C + GC+ L++H++ C +K++ C+ D ++++++ H
Sbjct: 130 QLDRHIQNCKFKFVECSHNGCDVVLRLNSLKEHENQCGYKLVKCKYCACDDTIQKELENH 189
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQ-CMIQQHRHDDLCSHL 283
CP + +GC PQ C I R D SH+
Sbjct: 190 --------NNECPKFPIGC----PQSCSIMVER-DQTQSHI 217
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 177 MKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLM 236
++ NS L EH CG+ + C C+ LE H++ CP I C Q C +
Sbjct: 154 LRLNS---LKEHENQCGYKLVKCKYCACDDTIQK-ELENHNNECPKFPIGCPQSCSIMVE 209
Query: 237 RRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
R H C C +Y GC+ + + +Q H
Sbjct: 210 RDQTQSHINNDCNNSTIQCKYYEYGCKVEMKRSELQNH 247
>gi|118091500|ref|XP_421089.2| PREDICTED: TNF receptor-associated factor 6 [Gallus gallus]
Length = 524
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 30/107 (28%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L EH LHC F ++ CP C F HL E
Sbjct: 146 RHLEEHQLHCDFTTVECPQ--CQGAFQKNHLKEHMTQECPRRQVCCPNCATSMAYEDKEL 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGC 262
HD CP + CE C L+R+ M H C C + A GC
Sbjct: 204 HDQTCPLANVFCE-YCNTMLIRQQMPNHYDNDCPTAPVPCFYSAFGC 249
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN+GC K HLE+H C F + C Q C + + H C +
Sbjct: 130 LTVKCPNKGCCLKMELRHLEEHQLHCDFTTVECPQ-CQGAFQKNHLKEHMTQECPRRQVC 188
Query: 255 CP 256
CP
Sbjct: 189 CP 190
>gi|440911212|gb|ELR60914.1| hypothetical protein M91_01211 [Bos grunniens mutus]
Length = 520
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 85/250 (34%), Gaps = 46/250 (18%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCE------------- 228
+ EH HC F M CP C F HL H CP + +PCE
Sbjct: 125 RHFEEHQAHCEFALMSCPQ--CQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEI 182
Query: 229 --QKCP----------DTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
Q CP L+R M H C C F A GC + + + H
Sbjct: 183 HEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNHLACHLQ 242
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEA-------PDVRSLSFAIKD 329
++ SH+ + Q + + L + V + +D + +V + I+
Sbjct: 243 ENTQSHMRMMAQAV---QTLSLAVAPVPQCTMPLYDSVPPTRPSSGRHSEVHNFQETIQQ 299
Query: 330 LEAKL----GPFKEDTVNRYSGEGKVNEEKKINEVKPDGEGTINGE----VNISEEGKIN 381
LE +L +E T + VNE K+ D I + + I + G
Sbjct: 300 LEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFG 359
Query: 382 ATDKVNEKEK 391
K E+EK
Sbjct: 360 MHLKSQEEEK 369
>gi|330842371|ref|XP_003293153.1| hypothetical protein DICPUDRAFT_83730 [Dictyostelium purpureum]
gi|325076553|gb|EGC30330.1| hypothetical protein DICPUDRAFT_83730 [Dictyostelium purpureum]
Length = 450
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+LN H+ C + + C N GC+ +EKH +C F I C + C + R + H
Sbjct: 134 QLNNHLEKCNYRFVECSNFGCDEIVRLNKIEKHQEICKFARITC-RDCETKIKRIEETDH 192
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
VC L C V C ++ +C ++ H
Sbjct: 193 -TEVCPSVLIVC----VQCNQSVKRCYLKDH 218
>gi|395729043|ref|XP_003775476.1| PREDICTED: TNF receptor-associated factor 5 isoform 3 [Pongo
abelii]
Length = 632
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 38/183 (20%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-------------------------- 218
L +H+ C F ++ C NE C L++H S
Sbjct: 200 LQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHE 259
Query: 219 --VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
+CP + C C +++ ++D H + VC +CPF GC T + +Q+H
Sbjct: 260 ENLCPEYPVFCPNNCAKIILKTEVDEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHER 318
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
L H+ +L+K + L+ ++ +L KS K ++ ++ L+ IK LE +
Sbjct: 319 SALREHMRLVLEKNVQ------LEEQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQ 369
Query: 337 FKE 339
F +
Sbjct: 370 FAQ 372
>gi|330804428|ref|XP_003290197.1| hypothetical protein DICPUDRAFT_36954 [Dictyostelium purpureum]
gi|325079708|gb|EGC33296.1| hypothetical protein DICPUDRAFT_36954 [Dictyostelium purpureum]
Length = 391
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
I L+N KN +C F K NE +I + GC AK + E H ++C
Sbjct: 38 IFLENSFRKNLVYCPYLFKESKFNNE---------LIKDDSGCRAKITIEEFENHINICQ 88
Query: 222 FKIIPC---EQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
+K C E KC T+ R+++ VC+ + +C GC+ I +C +++H+
Sbjct: 89 YKFCNCPNNETKCK-TITRKNLTTAHNEVCEYVIVSCD----GCEEPIEKCELRKHK 140
>gi|340375322|ref|XP_003386185.1| PREDICTED: TNF receptor-associated factor 3-like [Amphimedon
queenslandica]
Length = 480
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 27/147 (18%)
Query: 164 LKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKF----SAGH------- 212
L+ F H F S E +H+ C + + CP+ GC K +GH
Sbjct: 78 LERTSFPCFNHSCPWFGSNVEYKDHISTCSYAIITCPHIGCGQKLLRDEMSGHIETCIHA 137
Query: 213 ---------------LEKHDSV-CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP 256
LE H + CP IIPC C + RR + H C ++ C
Sbjct: 138 PTVCRFCKVSLPLSKLEDHFATDCPEYIIPCSLGCGTKVPRRILGEHLSDSCLLQERECR 197
Query: 257 FYAVGCQSTIPQCMIQQHRHDDLCSHL 283
F GC ++ +H DD H+
Sbjct: 198 FTKYGCHRKDTLELLIKHYKDDAGYHV 224
>gi|291190894|ref|NP_001167069.1| TNF receptor-associated factor 4 [Salmo salar]
gi|223647944|gb|ACN10730.1| TNF receptor-associated factor 4 [Salmo salar]
Length = 470
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P + C +F ++ H CP + C +C + R D+ H C L CPF
Sbjct: 194 PCKYCGKEFVFDTIQNHQYHCPRFPVACPNQCGTPNIAREDLANHVKENCGSALILCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEELEKS 309
GC+ P+ I +H D SHL + + R + + L+ +EEL S
Sbjct: 254 DAGCKHRCPKLAIGRHLEDTTKSHLTMMCSLVGRQRQEILELRREMEELSVS 305
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C++K + ++L +H+ H C + C E C ++F+ E H +CP + + CE KC
Sbjct: 117 CSIKL-TRRDLPDHLQHDCPKRKVKC--EFCGSEFTGEAYENHQGICPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLSQHSLAECPKRTQPCKY 197
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL + +L I I EGC L+ H S C F +IPC +C L R
Sbjct: 65 KIYPDPELEQQILALP-IRCIHSEEGCRWTGQMKQLQGHFSTCAFNVIPCPNRCSIKLTR 123
Query: 238 RDMDRHCITVCQMKLANCPF 257
RD+ H C + C F
Sbjct: 124 RDLPDHLQHDCPKRKVKCEF 143
>gi|405959310|gb|EKC25362.1| TNF receptor-associated factor 4 [Crassostrea gigas]
Length = 389
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFYAV 260
+ C+ +F L+ H CP + C +C P + R D+D H +C +C F
Sbjct: 121 QFCSREFVQETLQTHQYQCPRYPVVCPNRCDPTKIPREDLDLHVTELCPSATISCSFRDA 180
Query: 261 GCQSTIPQCMIQQHRHDDLCSHL 283
GC+ P+ +++H +++ HL
Sbjct: 181 GCKHKCPRFSMEKHTAENVQHHL 203
>gi|449671604|ref|XP_004207529.1| PREDICTED: TNF receptor-associated factor 4-like [Hydra
magnipapillata]
Length = 531
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 63/170 (37%), Gaps = 38/170 (22%)
Query: 153 INRREAIAHILLKNVDFKNEFHCNMKFNSEK------ELNEHMLHCGFISMICPNEGCNA 206
INR +A L K E CN + K E H C + +++C N C A
Sbjct: 164 INREKAFLDKTLTETIMKLEILCNFEEWGCKWEGTFGEGQSHFEKCDYTNILC-NHDCGA 222
Query: 207 KFSAGHLEKH-DSVCPFKII--------------------------PCEQKCPD--TLMR 237
KF L++H D CP KII PC KC T+ R
Sbjct: 223 KFQRRFLQRHLDKDCPKKIISCAFCEERCLREEKKAHLEDCQKVPLPCPNKCDKKLTIPR 282
Query: 238 RDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSH--LLY 285
++D H C C F +GC + +Q+H + +H LLY
Sbjct: 283 DELDNHIEVDCPRTKVLCQFEEIGCPHRCSRERLQKHNKTGIIAHVRLLY 332
>gi|410910220|ref|XP_003968588.1| PREDICTED: TNF receptor-associated factor 4-like [Takifugu
rubripes]
Length = 470
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P + C+ +F ++ H CP + C +C + R D+ H C L CPF
Sbjct: 194 PCKYCSKEFVFDTIQNHQYHCPRFPVQCPNQCGTPNIAREDLANHVKDNCGSALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ I +H D SHL + + R + + L+ +EEL
Sbjct: 254 DAGCKHRCPKLAIGRHLEDTTKSHLTMMCNLVGRQRQEILELRREMEEL 302
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 178 KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMR 237
K + EL + +L I I EGC L+ H S C F +IPC +C L R
Sbjct: 65 KIYPDPELEQQILALA-IRCIHSEEGCRWTGQMKQLQGHFSTCAFNVIPCPNRCSVKLTR 123
Query: 238 RDMDRHCITVCQMKLANCPF 257
RD+ H C + C F
Sbjct: 124 RDLPDHLQHDCPKRKVKCEF 143
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C++K + ++L +H+ H C + C E C ++F+ E H VCP + + CE KC
Sbjct: 117 CSVKL-TRRDLPDHLQHDCPKRKVKC--EFCGSEFTGEAYENHQGVCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLSQHGMAECPKRTQPCKY 197
>gi|347840034|emb|CCD54606.1| hypothetical protein [Botryotinia fuckeliana]
Length = 503
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEK----HDSVCPFKIIPCEQK 230
C K N +HC + + C + C H +DS CP+
Sbjct: 192 CKTHLQRSKLRNHLAIHCKEVEIACLDPDCKQLIKRLHQPNGCLHYDSFCPY-------- 243
Query: 231 CPDTLMRRDMDRHCITVCQMKLANC 255
C +TL+++DM+ HC + C + ANC
Sbjct: 244 CDETLLQKDMEEHCESKCTFRRANC 268
>gi|260795023|ref|XP_002592506.1| hypothetical protein BRAFLDRAFT_68997 [Branchiostoma floridae]
gi|229277726|gb|EEN48517.1| hypothetical protein BRAFLDRAFT_68997 [Branchiostoma floridae]
Length = 482
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFS----AGHLEKHDSVCPFKIIPCEQK 230
C K +E + +EH C F+ + CP +GC + A HLEK C + + C+
Sbjct: 73 CEWKGKAE-QYDEHQETCEFVLIPCPKQGCGKQVMRMDLAAHLEKE---CAVRQVKCKY- 127
Query: 231 CPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDD 278
C ++ +D H + +C NC F + IP+ +QQH+ +D
Sbjct: 128 CAQEILLKDEKDH-LFICPQVPVNCDFCG---KKKIPRAQLQQHQDED 171
>gi|363740588|ref|XP_415406.3| PREDICTED: TNF receptor-associated factor 1 [Gallus gallus]
Length = 535
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 27/198 (13%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDR 242
KE++E +HC + GC+ + + E+H +C + +IPC C +MR+ +
Sbjct: 107 KEISELRVHCVTL-------GCSWCGTMKNFEEHQILCEYALIPCHTGCGHVVMRKKLAD 159
Query: 243 HCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK-LHRDKPL--KVL 299
H C + C C+ ++ Q+H C LY QK + + P K
Sbjct: 160 HLENGCVNNVTVCH----KCKQSLSSSEYQEHS----CEDNLYREQKHVQAETPSDEKGS 211
Query: 300 KNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEGKVN---EEKK 356
K +++E EK+ A + L IK L+A L + N + + ++N EK
Sbjct: 212 KEKIKEHEKA-----AVGTHMLLLLQYIKQLKANLCTVSK-AANGFISQTELNVNGAEKS 265
Query: 357 INEVKPDGEGTINGEVNI 374
I+E+ G +NG++ +
Sbjct: 266 ISELCIPGSLQVNGDLEV 283
>gi|66803146|ref|XP_635416.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
gi|166203477|sp|P11467.2|DG17_DICDI RecName: Full=RING finger protein DG17; AltName: Full=Probable TNF
receptor-associated factor DDB_G0290961
gi|60463733|gb|EAL61911.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
Length = 460
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+++ H+++C + + C +GC LE H + C FK++ C+ D + +++++ H
Sbjct: 138 QIDSHLINCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVTCDFCKRDDIKKKELETH 197
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C M +C + GC I + I H +D C
Sbjct: 198 -YKTCPMVPIDC---SQGCSVKIERKSIIDHIENDCC 230
>gi|348505542|ref|XP_003440320.1| PREDICTED: TNF receptor-associated factor 4 [Oreochromis niloticus]
Length = 470
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P + C +F ++ H CP + C +C + R D+ H C L CPF
Sbjct: 194 PCKYCGKEFVFDTIQNHQYHCPRFPVQCPNQCGTPNIAREDLANHMKDNCGSALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEELEKSY 310
GC+ P+ I +H D SHL + + R + + L+ +EEL S+
Sbjct: 254 DAGCKHRCPKLAIGRHLEDTTKSHLTMMCNLVGRQRQEILELRREMEELSVSH 306
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C++K + ++L +H+ H C + C E C ++F+ E H VCP + + CE KC
Sbjct: 117 CSVKL-TRRDLPDHLQHDCPKRKVKC--EFCGSEFTGEAYENHQGVCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLSQHSMAECPKRTQPCKY 197
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257
EGC L+ H S C F +IPC +C L RRD+ H C + C F
Sbjct: 88 EGCRWTGQMKQLQGHFSTCAFNVIPCPNRCSVKLTRRDLPDHLQHDCPKRKVKCEF 143
>gi|326368646|gb|ADZ55454.1| TNF receptor-associated factor 3 [Cyprinus carpio]
Length = 573
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 33/169 (19%)
Query: 203 GCNAKFSAGHLEKHDSVCPFKIIPCEQ-KCPDTLMRRDMDRHC--------IT--VCQMK 251
GC + S + H VCP+ +PC KC + +MR+DM H IT C K
Sbjct: 126 GCKEQMSLQQVMDHLEVCPYFEVPCPLGKCKEKMMRKDMSEHLSRKCKHREITCEFCNHK 185
Query: 252 LA----------NCPFYAVGCQ-----STIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL 296
+A CP + V C S+I + + H+HD C +
Sbjct: 186 MALTELQKHKDTVCPAFPVACPNHCSFSSILRSELSSHQHD--CPKAQVTCSFIRYGCSF 243
Query: 297 KVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRY 345
K L + E E S+ + +R ++ LEAK+ K + + RY
Sbjct: 244 KGLNQEMREHESSFASE-----HLRLMAVRNTTLEAKVEDVKSELMERY 287
>gi|423361340|ref|ZP_17338842.1| hypothetical protein IC1_03319 [Bacillus cereus VD022]
gi|401079788|gb|EJP88082.1| hypothetical protein IC1_03319 [Bacillus cereus VD022]
Length = 286
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 427 GRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDT 486
G+K +EE + +EQ E K+ + + E++KA E KV + +K E+ KA +
Sbjct: 185 GQKKAEEQKKVEEQKKAEEQ----KKVEEQKKAEEQKKAEEQKKVEEQKKAEEQKKAEEQ 240
Query: 487 GKVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKV 529
KV ++ +A E +KV E++ I E K +V E++K+ + K
Sbjct: 241 KKVEEQKKAEEQKKVEEQKKIEEQK----KVEEQKKVEEQKKA 279
>gi|269785041|ref|NP_001161672.1| TRAF-like protein [Saccoglossus kowalevskii]
gi|268054369|gb|ACY92671.1| TRAF-like protein [Saccoglossus kowalevskii]
Length = 463
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
+ K L H+ + C +++C E C A F+ +E H C F+ + CE KC L RR
Sbjct: 122 TRKLLKHHLSNECPRRTVVC--EHCGADFTGVMMEGHRGSCQFQQVQCENKCGVKLQRRY 179
Query: 240 MDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDL 279
+ H + C ++ +C + C + +Q H H L
Sbjct: 180 LSSHTLNECPKRMLSCKY----CHKDVIFDTLQTHLHHCL 215
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 13/113 (11%)
Query: 178 KFNSEKELNE---HMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PD 233
++ S LNE ML C + C+ L+ H C + C +C P+
Sbjct: 178 RYLSSHTLNECPKRMLSCKY---------CHKDVIFDTLQTHLHHCLKYPVTCPNRCDPE 228
Query: 234 TLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYI 286
L R D+++H C NCPF GC+ P+ ++QH ++ HLL +
Sbjct: 229 RLARGDLEKHLKENCPSSTINCPFQGQGCKYKSPRFALEQHLENNSREHLLMM 281
>gi|42782061|ref|NP_979308.1| hypothetical protein BCE_3005 [Bacillus cereus ATCC 10987]
gi|42737985|gb|AAS41916.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 570
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 350 KVNEEKKINEV-KPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNE-- 406
K EE+K+ EV KP E + V EE K+ K E+EKI +KP E K E
Sbjct: 212 KPKEEEKVQEVVKPKEEEKVQEVVKPKEEEKVQEVVKPKEEEKIQEVAKPKEEAKVQEVA 271
Query: 407 --QEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQK 464
+E++ +V + K E K EE+++ + E K+ + EE K
Sbjct: 272 KPKEEEKVQEVAKPKEEEKVQEVVKPKEEEKVQEVAKSKEE-----AKVQEVAKPKEEAK 326
Query: 465 ANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINE 509
E K + KV EE KA + K +E +A E K EE E
Sbjct: 327 VQEVVKPKEEAKVQEEAKAQEIAKAKEEAKAQEIAKAKEEEKARE 371
>gi|268575684|ref|XP_002642821.1| C. briggsae CBR-TRF-1 protein [Caenorhabditis briggsae]
Length = 466
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 161 HILLKNVDFKNEFHCNM--KFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS 218
H L FK+ C + ++ +L+ H C +C CN LE+H
Sbjct: 98 HDHLTECTFKSSLKCEKCGRQFAKADLDRHREKCELNRAMC--SYCNKTIRDSDLERHLK 155
Query: 219 VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN----CPFYAVGCQSTIPQCMIQQH 274
CP II C +C + D RH I + + N CPF GC + IQQH
Sbjct: 156 TCPEVIISCPFQCGLS----DRPRHEIEAHRPQCPNVDNVCPFVPYGCTFAGGKESIQQH 211
Query: 275 RHDDLCSHLLYI 286
D+ HL+Y+
Sbjct: 212 LSDEPVRHLMYL 223
>gi|449666691|ref|XP_002156351.2| PREDICTED: TNF receptor-associated factor 5-like [Hydra
magnipapillata]
Length = 375
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 29/132 (21%)
Query: 187 EHMLHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCPDTLMRRDMDRH-- 243
EH+ C + +++CPNE C F G L +H + C F+ + C Q C + + +D+ H
Sbjct: 76 EHVKSCPYENIVCPNELCQDLFPRGTLSQHLEQRCKFRSVFC-QFCSEKYIHKDVKSHLK 134
Query: 244 --------CITVCQMK-----------------LANCPFYAVGCQSTIPQCMIQQHRHDD 278
C+ C+ K +A CPF +GC+ + + +++ H
Sbjct: 135 HCKKFPMECVNKCEKKDIPREKMASHLEECPFSIALCPFSEIGCEFSGKKDVLENHVTLA 194
Query: 279 LCSHLLYILQKL 290
+ HL + KL
Sbjct: 195 VNDHLSLAMTKL 206
>gi|47230748|emb|CAF99941.1| unnamed protein product [Tetraodon nigroviridis]
Length = 565
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 194 FISMI--CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMK 251
+S+I C N GC +K HLE H + C F +PC C ++ + ++ H C+ +
Sbjct: 138 ILSLIVRCSNPGCTSKMELRHLENHLASCEFATVPCPH-CQQSVKKTLLEEHTSVQCRRR 196
Query: 252 LANCP 256
+CP
Sbjct: 197 PVSCP 201
>gi|403277575|ref|XP_003930432.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403277577|ref|XP_003930433.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 558
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C + C + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCREPVLRKDLKEHLSAYCQFRE 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C V C+ + +Q H ++LC
Sbjct: 166 EKC----VYCKKDVIVINLQNHE-ENLC 188
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ +C F C C +L+ H+ ++CP + C C + + ++
Sbjct: 151 KDLKEHLSAYCQFREEKCVY--CKKDVIVINLQNHEENLCPEYPVFCPNSCSKIIPKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
D H + VC +CPF GC T + +Q+H L H+ +L+K
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQEHEQSALREHMRLVLEK 256
>gi|66822521|ref|XP_644615.1| hypothetical protein DDB_G0273433 [Dictyostelium discoideum AX4]
gi|66822561|ref|XP_644635.1| hypothetical protein DDB_G0273509 [Dictyostelium discoideum AX4]
gi|122129512|sp|Q557K0.1|Y3509_DICDI RecName: Full=TNF receptor-associated factor family protein
DDB_G0273433/DDB_G0273509
gi|60472721|gb|EAL70671.1| hypothetical protein DDB_G0273433 [Dictyostelium discoideum AX4]
gi|60472759|gb|EAL70709.1| hypothetical protein DDB_G0273509 [Dictyostelium discoideum AX4]
Length = 450
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 47/188 (25%)
Query: 185 LNEHMLHCGFISMICPNEG--CNAKFSAGHLEKHD-SVCPFKIIPCEQ------------ 229
L H+ C + + CPN C +E H+ SVC + +I CE+
Sbjct: 127 LEHHLKECQYQFIKCPNNSNKCKYIIRKNQIEHHNQSVCDYSLIQCEKCSELIERKKLNK 186
Query: 230 --------------KCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
KC ++ ++ M+ H T C M+ +C + A GC + + QH
Sbjct: 187 HIESECDTLMITCSKCSASIGKKLMNHHLETDCPMEEISCLYKAGGCNKRFLRSQLSQHL 246
Query: 276 HDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLG 335
++ +H+ YI V +L K D+ + D R L +DLE +L
Sbjct: 247 SENN-NHIFYI--------------QNVMDLHKLQLDECNQ--DYRKLEKQNRDLEKRLF 289
Query: 336 PFKEDTVN 343
+ E TVN
Sbjct: 290 -YLESTVN 296
>gi|334322068|ref|XP_001374168.2| PREDICTED: TNF receptor-associated factor 5 [Monodelphis domestica]
Length = 560
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 39/204 (19%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKF----SAGHLEKH- 216
+L V KN HC K + +H+L C F S+ C NE C + HLE H
Sbjct: 105 VLNLQVFCKNAPHCAAKMILGR-YQDHLLQCLFQSVQCSNECCQERILRKDLKNHLELHC 163
Query: 217 ---DSVCPF--------------------KIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
+ +CPF + C C + R ++ H I+VC
Sbjct: 164 QFREEMCPFCNKDVVIIDLQNHKEQFCPNYPVSCPNNCLQIITRTKVNEH-ISVCPEVEQ 222
Query: 254 NCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDK 313
C + GC + +++H + L H+L +L++ R L+ ++ +L K+ +
Sbjct: 223 ECAYKHYGCPVKDKRSNLKKHENSALREHMLLVLERNSR------LEEQIFDLHKNL--E 274
Query: 314 LAEAPDVRSLSFAIKDLEAKLGPF 337
L E+ ++ LS +K E + F
Sbjct: 275 LKES-KIQQLSETVKKFEKEFRQF 297
>gi|410903894|ref|XP_003965428.1| PREDICTED: TNF receptor-associated factor 2-like [Takifugu
rubripes]
Length = 520
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 180 NSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
++E+E L+C + C F ++ HD +C +PC+ + R
Sbjct: 147 HNERECEARTLNCKY---------CKLTFHFKDIKAHDDICLKFPLPCKDCGKKKIPREK 197
Query: 240 MDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYIL 287
+ H I C + CPF VGC+S + +++H H HL +L
Sbjct: 198 FNEH-IRSCAKSKSACPFSEVGCKSVVDNGKLREHEHSSTVEHLHLLL 244
>gi|51011109|ref|NP_001003513.1| TNF receptor-associated factor 3 [Danio rerio]
gi|50416906|gb|AAH77157.1| TNF receptor-associated factor 3 [Danio rerio]
Length = 573
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 33/169 (19%)
Query: 203 GCNAKFSAGHLEKHDSVCPFKIIPCEQ-KCPDTLMRRDMDRHC----------ITVCQMK 251
GC + + +H +CP+ +PC KC + +MR+DM H C +K
Sbjct: 126 GCKEQMCLQQVMEHLVICPYFEVPCPLGKCKEKMMRKDMPEHLSRKCKHREVTCEFCSLK 185
Query: 252 LA----------NCPFYAVGCQ-----STIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL 296
+A CP + V C S+I + + H+HD C +
Sbjct: 186 MALTELQKHKETVCPAFPVACPNHCSFSSILRSELSSHQHD--CPKAQVTCSFIRYGCSY 243
Query: 297 KVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRY 345
K L + E E S+ + +R ++ LEAK+ K + + RY
Sbjct: 244 KGLNQEMREHESSFASE-----HLRMMAVRNTTLEAKVEDVKSELMERY 287
>gi|330794386|ref|XP_003285260.1| hypothetical protein DICPUDRAFT_76180 [Dictyostelium purpureum]
gi|325084802|gb|EGC38222.1| hypothetical protein DICPUDRAFT_76180 [Dictyostelium purpureum]
Length = 408
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 74/195 (37%), Gaps = 56/195 (28%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPC---------------- 227
+++ H+ C + + C N GC + A + +H+ VC ++I+ C
Sbjct: 116 QIDSHLKSCLYNYVNCSNPGCGEEHRANTVGEHEKVCKYQIVSCLLCNDNNIQRKDLKYH 175
Query: 228 ----------EQKCPDTLMRR-DMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
KC TL+ R + +H C L C + GC IP+C + +H
Sbjct: 176 YDCICSKTKTHCKCCSTLIERGQLPQHMAEECGNVLIPCRYKDGGCDKYIPRCELSKHL- 234
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGP 336
+ D K + N +E+ KS D+LA + + L+F
Sbjct: 235 -------------IEEDNHHKYILNIIEQ-HKSRMDQLASSINSMKLNF----------- 269
Query: 337 FKEDTVNRYSGEGKV 351
+ NRYSG+ +
Sbjct: 270 ---ENQNRYSGKWII 281
>gi|260797887|ref|XP_002593932.1| hypothetical protein BRAFLDRAFT_98231 [Branchiostoma floridae]
gi|229279164|gb|EEN49943.1| hypothetical protein BRAFLDRAFT_98231 [Branchiostoma floridae]
Length = 257
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH- 243
+++H CGF+++ CPN GC+ +L+ H +VC F+ C + C ++ D H
Sbjct: 98 ISKHERECGFVTVCCPNMGCSTIVERRNLDVHLNVCDFRCKECPRGCGMQILNHDDAEHN 157
Query: 244 CIT 246
CI
Sbjct: 158 CIA 160
>gi|328868011|gb|EGG16392.1| RGS-containing protein kinase RCK1 [Dictyostelium fasciculatum]
Length = 423
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 25/152 (16%)
Query: 192 CGFISMI--------CPN-----EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRR 238
CG I I CP + C ++ ++KH C I C+ KC L++R
Sbjct: 135 CGLIRKIQLVDHLEKCPKRPIKCDHCLIEYPFSDIDKHLLECEMIEIQCD-KCNTKLLKR 193
Query: 239 DMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYI-------LQKLH 291
D + H + C +CPF+ GC + +Q+H L HL+ + + L
Sbjct: 194 DFETHKLNECPNCHVHCPFFDSGCLKMFDRKNLQEHIDKSLGEHLILMKNNYTQSISSLK 253
Query: 292 RD--KPLKVLKNRVEELEKSYFDKLAEAPDVR 321
+D + LK +++++LEK DK PD +
Sbjct: 254 KDFNQQLKEKDDQIKKLEKVLNDK--HEPDTK 283
>gi|66803336|ref|XP_635511.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
gi|74851645|sp|Q54FG0.1|Y0883_DICDI RecName: Full=TNF receptor-associated factor family protein
DDB_G0290883
gi|60463832|gb|EAL62006.1| RING zinc finger-containing protein [Dictyostelium discoideum AX4]
Length = 460
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+++ H+++C + + C +GC LE H + C FK++ C+ D + +++++ H
Sbjct: 138 QIDSHLINCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVICDFCKRDDIKKKELETH 197
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C M +C + GC I + I H +D C
Sbjct: 198 -YKTCPMVPIDC---SQGCSVKIERKSIIDHIENDCC 230
>gi|330791993|ref|XP_003284075.1| hypothetical protein DICPUDRAFT_75030 [Dictyostelium purpureum]
gi|325086004|gb|EGC39401.1| hypothetical protein DICPUDRAFT_75030 [Dictyostelium purpureum]
Length = 296
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
E +H HC + + C C+ KF+ G +EKH C ++ CEQ C L R ++ H
Sbjct: 157 ETKQHAEHCDYSPLECI--YCSNKFTTGSIEKHYLECQNIVLSCEQ-CCTKLKRSELSNH 213
Query: 244 CITVCQMKLANCPFYAVGC 262
C + C + + GC
Sbjct: 214 IDNECPNSIVFCKYKSTGC 232
>gi|345329465|ref|XP_001509429.2| PREDICTED: TNF receptor-associated factor 5 [Ornithorhynchus
anatinus]
Length = 557
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 16/141 (11%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K++ +H+ HC F C + C A L+ H+ + CP + C C + R ++
Sbjct: 150 KDMKDHLGCHCKFREEKC--QYCQKYVVAIDLQNHEENFCPDYPVSCPFSCCQIIPRTEV 207
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK----------L 290
D H I+VC +CP+ GC + +++H + L H+L +L K L
Sbjct: 208 DEH-ISVCPEAEQDCPYKQYGCLIKDKRRNLREHENAALREHMLLVLDKNSRLEEKISDL 266
Query: 291 HRDKPLKVLK-NRVEELEKSY 310
HR +K LK ++ E+ K +
Sbjct: 267 HRSLEVKELKIQQLAEMVKKF 287
>gi|154315609|ref|XP_001557127.1| hypothetical protein BC1G_04377 [Botryotinia fuckeliana B05.10]
Length = 411
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGH----LEKHDSVCPFKIIPCEQK 230
C K N +HC + + C + C H +DS CP+
Sbjct: 192 CKTHLQRSKLRNHLAIHCKEVEIACLDPDCKQLIKRLHQPNGCLHYDSFCPY-------- 243
Query: 231 CPDTLMRRDMDRHCITVCQMKLANC 255
C +TL+++DM+ HC + C + ANC
Sbjct: 244 CDETLLQKDMEEHCESKCTFRRANC 268
>gi|215415903|dbj|BAG85182.1| Traf3 [Eptatretus burgeri]
Length = 561
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 175 CNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDT 234
C+M + + +H C F C + C+A LE+H CP ++PC C +
Sbjct: 142 CSMHL-ARLYMPQHHGTCPFRLEFC--KFCSAPVPCVQLEEHKQTCPKYLLPCPNNCDEH 198
Query: 235 -LMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQK 289
+ R ++++H + C + C F+ GC + +H + HLL +L+K
Sbjct: 199 GIPRNELEKH-LVQCALTEQPCSFHRFGCDFKACGKGVSEHEAGSVPQHLLLVLRK 253
>gi|330797048|ref|XP_003286575.1| hypothetical protein DICPUDRAFT_18495 [Dictyostelium purpureum]
gi|325083480|gb|EGC36932.1| hypothetical protein DICPUDRAFT_18495 [Dictyostelium purpureum]
Length = 217
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHC 244
L +H+ C + + C + C F ++ H S CP K +PC QKC ++R +M++H
Sbjct: 128 LEDHIKECEYRFISCSD--CGMDFRISYIPIHSSECPKKSVPCIQKCYKNVVRCEMNKHT 185
Query: 245 ITVCQMKLANCPFYAVGCQ 263
C + C + GC+
Sbjct: 186 DNECGNTVMECKYKEAGCE 204
>gi|350596677|ref|XP_003484307.1| PREDICTED: TNF receptor-associated factor 5-like, partial [Sus
scrofa]
Length = 455
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPC-EQKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GC AK G + H C F+ + C ++C + ++R+D+ H T CQ +
Sbjct: 107 LYVFCKNAPGCTAKIILGRYQDHLQQCLFQAVQCCNERCQEPVLRKDLKEHASTYCQFRE 166
Query: 253 ANCPF 257
C +
Sbjct: 167 EKCLY 171
>gi|330841466|ref|XP_003292718.1| hypothetical protein DICPUDRAFT_40987 [Dictyostelium purpureum]
gi|325077015|gb|EGC30757.1| hypothetical protein DICPUDRAFT_40987 [Dictyostelium purpureum]
Length = 430
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 188 HMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITV 247
H+ C + S+ C + C+ + +E+H CP +I C C + + R +M H
Sbjct: 153 HISKCEYQSLNCTH--CSNVYLLKTIEQHYLECPSMLIDCFV-CEEKIKRGEMYNHLDIE 209
Query: 248 CQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL--------HRDKPLKVL 299
CQ +C F GC I +C ++ H D +H Y+ + H + +L
Sbjct: 210 CQEVTISCKFSQFGCNDKIKRCNLENHL--DQINHTKYLSTAIDGLSTSIEHLNIKNNLL 267
Query: 300 KNRVEELEKS 309
N ++EL K+
Sbjct: 268 SNSIDELTKN 277
>gi|332210765|ref|XP_003254483.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Nomascus
leucogenys]
gi|332210767|ref|XP_003254484.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Nomascus
leucogenys]
Length = 522
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 48/136 (35%), Gaps = 30/136 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F M CP C+ F H+ E
Sbjct: 146 RHLEDHQAHCEFALMDCPQ--CHRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEI 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP + CE C L+R M H C C F GC + + + +H
Sbjct: 204 HDQNCPLANVICE-YCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHL 262
Query: 276 HDDLCSHLLYILQKLH 291
++ SH+ + Q +H
Sbjct: 263 QENTQSHMRMLAQAVH 278
>gi|344238120|gb|EGV94223.1| TNF receptor-associated factor 6 [Cricetulus griseus]
Length = 508
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 45/136 (33%), Gaps = 30/136 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F M CP C F H E
Sbjct: 124 RHLEDHQAHCEFALMNCPQ--CQRPFQKCHFHIHIIEDCPRRQVSCVNCAVSMPFEEKEI 181
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP I CE C L+R M H C C F GC + + + +H
Sbjct: 182 HDQTCPLANIICE-YCGTVLIREQMPNHYDLDCPTAPIPCTFSVFGCHEKMQRNHLARHL 240
Query: 276 HDDLCSHLLYILQKLH 291
++ H+ + Q +H
Sbjct: 241 QENTQLHMRLLAQAVH 256
>gi|417402531|gb|JAA48111.1| Putative tnf receptor-associated factor 6 [Desmodus rotundus]
Length = 541
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 67/183 (36%), Gaps = 34/183 (18%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H +HC F CP C F HL E
Sbjct: 146 RHLEDHQVHCEFALTNCPQ--CQRPFQKCHLNIHILKECPRRQVSCINCAVSMAFEDKEI 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP + CE C L+R M H C C F GC + + + +H
Sbjct: 204 HDQNCPLANVVCE-YCNTMLIREQMPNHFDLDCPTAPIPCTFSTFGCHEKMQRIHLARHL 262
Query: 276 HDDLCSHLLYILQKLHRDKPLKVLKNRVEEL--EKSYFDKLAEA--PDVRSLSFAIKDLE 331
++ SH+ + Q + + + + L E S +++ P+V++ I+ LE
Sbjct: 263 QENTQSHMRMLAQAVQSLNLAVAPRPQRDMLPYESSSLPRISSGCHPEVQNFQETIQQLE 322
Query: 332 AKL 334
++L
Sbjct: 323 SRL 325
>gi|226482674|emb|CAX73936.1| TNF receptor-associated factor 3 [Schistosoma japonicum]
Length = 497
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 46/127 (36%), Gaps = 27/127 (21%)
Query: 184 ELNEHMLHCGFISMICPNEG--------------------------CNAKFSAGHLEKHD 217
EL H+ C + ++CPNE C AKFS KH
Sbjct: 169 ELGCHLNQCEYKIVLCPNECGTEFQRKSIEGHVKNGCPKRNVQCKFCGAKFSVEKEAKHI 228
Query: 218 SVCPFKIIPCEQKCPDTLMRRDM-DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
S C +PC KC T + R + H C + CPF GC+ + + QH
Sbjct: 229 SYCREYPLPCPNKCEMTSIPRSLIPEHLKNECSRQNLRCPFNIHGCEYRGRKYKMDQHLE 288
Query: 277 DDLCSHL 283
L HL
Sbjct: 289 LSLIKHL 295
>gi|330831836|ref|XP_003291961.1| hypothetical protein DICPUDRAFT_39826 [Dictyostelium purpureum]
gi|325077821|gb|EGC31509.1| hypothetical protein DICPUDRAFT_39826 [Dictyostelium purpureum]
Length = 426
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 188 HMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITV 247
H+ C +IC + C+ + +E+H CP +I C++ C + R +MD H
Sbjct: 154 HISECENRPLICTH--CSNVYLLKTIEQHYLECPSMLIDCKE-CSQKIKREEMDNHVDKE 210
Query: 248 CQMKLANCPFYAVGCQSTIPQCMIQQH 274
CQ + +C F GC I + ++ H
Sbjct: 211 CQEVIISCKFSPFGCNDKIKRKNLENH 237
>gi|330797464|ref|XP_003286780.1| hypothetical protein DICPUDRAFT_31439 [Dictyostelium purpureum]
gi|325083223|gb|EGC36681.1| hypothetical protein DICPUDRAFT_31439 [Dictyostelium purpureum]
Length = 419
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 185 LNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHC 244
L H+ C F + CPN + +E+H C + I C C + R+ M H
Sbjct: 126 LESHLRECQFQFIDCPNNKKCGMYRKNQMEQHQGQCGYLKISCYH-CMQDIERQFMGEHI 184
Query: 245 ITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
+ C C + GCQ+ IP+ + H
Sbjct: 185 LNECNDITVQCRYSEGGCQAMIPRNQLAAH 214
>gi|226482672|emb|CAX73935.1| TNF receptor-associated factor 3 [Schistosoma japonicum]
Length = 497
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 46/127 (36%), Gaps = 27/127 (21%)
Query: 184 ELNEHMLHCGFISMICPNEG--------------------------CNAKFSAGHLEKHD 217
EL H+ C + ++CPNE C AKFS KH
Sbjct: 169 ELGCHLNQCEYKIVLCPNECGAEFQRKSIEDHVKNGCPKRNIQCKFCGAKFSVEKEAKHI 228
Query: 218 SVCPFKIIPCEQKCPDTLMRRDM-DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
S C +PC KC T + R + H C + CPF GC+ + + QH
Sbjct: 229 SYCREYPLPCPNKCEMTSIPRSLIPEHLKNECSRQNLRCPFNIHGCEYRGRKYKMDQHLE 288
Query: 277 DDLCSHL 283
L HL
Sbjct: 289 LSLIKHL 295
>gi|281207810|gb|EFA81990.1| hypothetical protein PPL_05225 [Polysphondylium pallidum PN500]
Length = 689
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 428 RKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTG 487
+++ EE R+ +E+ V E ++ E RV EE++ E +V + ++V+EE + +
Sbjct: 226 KRLVEEKRVAEEKRVAEEK-----RVAEEKRVAEEKRVAEEKRVAEEKRVAEEKRVAEEK 280
Query: 488 KVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKV 529
++ +E R +E ++V+EE+ + E K R+ EE+++ E ++
Sbjct: 281 RIAEEKRVAEEKRVAEEKRVAEEK----RIAEEKRVAEEKRL 318
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 84/162 (51%), Gaps = 23/162 (14%)
Query: 371 EVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNG--R 428
E ++EE ++ +V E+++IS QE + V+E + E K +
Sbjct: 198 EKRVAEEKRLAEEKRVAEEKRIS-------------QEVEQKRLVEEKRVAEEKRVAEEK 244
Query: 429 KVSEEDRIHDEQNVNREGTI-DGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDTG 487
+V+EE R+ +E+ V E + + ++ E RV EE++ E +V + ++V+EE + +
Sbjct: 245 RVAEEKRVAEEKRVAEEKRVAEEKRVAEEKRVAEEKRIAEEKRVAEEKRVAEEKRVAEEK 304
Query: 488 KVNKEVRASEGRKVSEERNINEGKTNGVRVNEEEKINAEGKV 529
++ +E R +E +++++E T R+ EE+++ E ++
Sbjct: 305 RIAEEKRVAEEKRLAQE-------TEQKRLAEEKRLAEEKRL 339
>gi|405977751|gb|EKC42185.1| TNF receptor-associated factor 6 [Crassostrea gigas]
Length = 533
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 174 HCNMKFNSEKEL-NEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQK-- 230
HC + S + L N+H C F CPN CN K + H CP +++ C K
Sbjct: 249 HC--LYTSRRHLMNDHSTKCHFAIEKCPNVDCNVKRQRSKMSSHVQKCPHRVVLCTNKSV 306
Query: 231 -CPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQ 263
C T+ +D++ H L CP+ + C+
Sbjct: 307 GCMATMSYQDLNTH--------LKTCPWSSQPCE 332
>gi|4759254|ref|NP_004611.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|22027630|ref|NP_665802.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|30580642|sp|Q9Y4K3.1|TRAF6_HUMAN RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6; AltName:
Full=Interleukin-1 signal transducer; AltName: Full=RING
finger protein 85
gi|1732426|gb|AAB38751.1| putative interleukin 1 signal transducer [Homo sapiens]
gi|28372409|gb|AAO38054.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|119588525|gb|EAW68119.1| TNF receptor-associated factor 6, isoform CRA_a [Homo sapiens]
gi|119588526|gb|EAW68120.1| TNF receptor-associated factor 6, isoform CRA_a [Homo sapiens]
gi|119588528|gb|EAW68122.1| TNF receptor-associated factor 6, isoform CRA_a [Homo sapiens]
gi|158259417|dbj|BAF85667.1| unnamed protein product [Homo sapiens]
gi|168278030|dbj|BAG10993.1| TNF receptor-associated factor 6 [synthetic construct]
Length = 522
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 30/136 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F M CP C F H+ E
Sbjct: 146 RHLEDHQAHCEFALMDCPQ--CQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEI 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP + CE C L+R M H C C F GC + + + +H
Sbjct: 204 HDQNCPLANVICE-YCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHL 262
Query: 276 HDDLCSHLLYILQKLH 291
++ SH+ + Q +H
Sbjct: 263 QENTQSHMRMLAQAVH 278
>gi|114637057|ref|XP_001154136.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Pan
troglodytes]
gi|297688920|ref|XP_002821919.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Pongo
abelii]
gi|297688922|ref|XP_002821920.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Pongo
abelii]
gi|397520606|ref|XP_003830405.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Pan
paniscus]
gi|397520608|ref|XP_003830406.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Pan
paniscus]
gi|410219122|gb|JAA06780.1| TNF receptor-associated factor 6 [Pan troglodytes]
gi|410266204|gb|JAA21068.1| TNF receptor-associated factor 6 [Pan troglodytes]
gi|410294410|gb|JAA25805.1| TNF receptor-associated factor 6 [Pan troglodytes]
gi|410349181|gb|JAA41194.1| TNF receptor-associated factor 6 [Pan troglodytes]
Length = 522
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 30/136 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F M CP C F H+ E
Sbjct: 146 RHLEDHQAHCEFALMDCPQ--CQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEI 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP + CE C L+R M H C C F GC + + + +H
Sbjct: 204 HDQNCPLANVICE-YCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHL 262
Query: 276 HDDLCSHLLYILQKLH 291
++ SH+ + Q +H
Sbjct: 263 QENTQSHMRMLAQAVH 278
>gi|21410269|gb|AAH31052.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|123980612|gb|ABM82135.1| TNF receptor-associated factor 6 [synthetic construct]
gi|123995433|gb|ABM85318.1| TNF receptor-associated factor 6 [synthetic construct]
Length = 522
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 30/136 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F M CP C F H+ E
Sbjct: 146 RHLEDHQAHCEFALMDCPQ--CQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEI 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP + CE C L+R M H C C F GC + + + +H
Sbjct: 204 HDQNCPLANVICE-YCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHL 262
Query: 276 HDDLCSHLLYILQKLH 291
++ SH+ + Q +H
Sbjct: 263 QENTQSHMRMLAQAVH 278
>gi|123456752|ref|XP_001316109.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121898806|gb|EAY03886.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 900
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 11/120 (9%)
Query: 394 NKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKI 453
N+++ N+ G N+ E + KEG N V++E + + VN+EG + ++
Sbjct: 5 NQNQENKEGNANQNEVVN----KEG----NANQNEVVNKEGNANQNEVVNKEGNANQNEV 56
Query: 454 -NNETRVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKT 512
N E N+ Q+ N+ G + E V++EG AN G VNKE + +V +E+ IN+ +T
Sbjct: 57 VNKEGNANQNQE-NKEGNANQNEVVNKEGNANQNGIVNKE-ENTNTNQVDQEQKINQNET 114
>gi|354470461|ref|XP_003497507.1| PREDICTED: TNF receptor-associated factor 6-like [Cricetulus
griseus]
Length = 530
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 45/136 (33%), Gaps = 30/136 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F M CP C F H E
Sbjct: 146 RHLEDHQAHCEFALMNCPQ--CQRPFQKCHFHIHIIEDCPRRQVSCVNCAVSMPFEEKEI 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP I CE C L+R M H C C F GC + + + +H
Sbjct: 204 HDQTCPLANIICE-YCGTVLIREQMPNHYDLDCPTAPIPCTFSVFGCHEKMQRNHLARHL 262
Query: 276 HDDLCSHLLYILQKLH 291
++ H+ + Q +H
Sbjct: 263 QENTQLHMRLLAQAVH 278
>gi|260795013|ref|XP_002592501.1| hypothetical protein BRAFLDRAFT_68992 [Branchiostoma floridae]
gi|229277721|gb|EEN48512.1| hypothetical protein BRAFLDRAFT_68992 [Branchiostoma floridae]
Length = 631
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 32/139 (23%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFS----AGHLEK-----------------------H 216
+ +EH +C F ++CP +GC + A HLEK H
Sbjct: 149 QYDEHQENCEFGLILCPKQGCGKQVMRMDLAAHLEKECAVRQVKCKYCAQEILLKDEKDH 208
Query: 217 DSVCPFKIIPCE----QKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQ 272
+CP + C+ +K P +++ D + I C+ CPF VGC + + + +
Sbjct: 209 LFICPQVPVNCDFCGKKKIPRAQLQQHQDEN-IGDCRRLKVACPFAIVGCPAKLEREKLN 267
Query: 273 QHRHDDLCSHLLYILQKLH 291
H HL +L K H
Sbjct: 268 DHIAKHQADHLSLVLDKYH 286
>gi|258596939|ref|XP_001349702.2| DNAJ protein, putative [Plasmodium falciparum 3D7]
gi|254688493|gb|AAC71973.3| DNAJ protein, putative [Plasmodium falciparum 3D7]
Length = 997
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 413 GDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVT 472
+++EG+ E N +K+ +++ + D + + K +VN +K N KV
Sbjct: 408 NNIEEGENVEYLKNNKKIGDDEMLQDYEKEKLKKKKWTEKEEQTKKVNYSEKVNHSEKVN 467
Query: 473 KGEKVSEEGKANDTGKVNKEVRASEGRKV--SEERNINEGKTNGVRVNEEEKINAEGKVN 530
EK++ K N + K+N + + KV SE+ N +E + +VN EK+N K+N
Sbjct: 468 HSEKLNHSEKLNHSEKLNHSEKVNHSEKVNHSEKVNHSEKVNHSEKVNHSEKVNHSEKLN 527
>gi|193788582|ref|NP_001123338.1| zinc finger protein (TRAF/RING)-2 [Ciona intestinalis]
gi|93003064|tpd|FAA00115.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 468
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLM--RRDMDRHCITVCQMKLANCPFYAVG 261
C+ F+ L+ H CP I C +C D L R +++ H C+ L CPF G
Sbjct: 198 CSKDFNIDILQTHHGTCPRYPIGCPNRC-DVLKIPREELEIHLKEHCKSALTACPFKEAG 256
Query: 262 CQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFD 312
C+ P+ +++H + SH+ + +K ++ + EL+K D
Sbjct: 257 CKHKCPRYHLERHLTEANASHIRAMFDL------VKTQRSHISELQKQLSD 301
>gi|66800659|ref|XP_629255.1| TRAF-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|74850704|sp|Q54C11.1|Y3202_DICDI RecName: Full=TNF receptor-associated factor family protein
DDB_G0293202
gi|60462597|gb|EAL60800.1| TRAF-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 437
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCPDTLMRRDMD 241
K L++H+ CGF CPN CN K +E+H D C I C + C T+ R DMD
Sbjct: 152 KNLDQHLQTCGFQLEDCPN--CNNKIIRKSIEEHIDEECLKTKIKCLE-CGSTVERGDMD 208
Query: 242 RHCITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
H VC + C GC + + H
Sbjct: 209 FHLDNVCPNIVIPCILCDNGCDLLFKRSELSNH 241
>gi|296217925|ref|XP_002755232.1| PREDICTED: TNF receptor-associated factor 6 [Callithrix jacchus]
Length = 523
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 26/134 (19%)
Query: 183 KELNEHMLHCGFISMICPN-------------------------EGCNAKFSAGHLEKHD 217
+ L +H +HC F M CP C A + E HD
Sbjct: 146 RHLEDHQVHCEFALMDCPQCQRPFQKCQINIHILKDCPRRQVSCVNCAASMAFEDKEIHD 205
Query: 218 SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277
CP + CE C L+R M H C C F GC + + + +H +
Sbjct: 206 QNCPLANVVCE-YCNTVLIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQE 264
Query: 278 DLCSHLLYILQKLH 291
+ SH+ + Q +H
Sbjct: 265 NTQSHMRMLAQAVH 278
>gi|47086399|ref|NP_997982.1| tnf receptor-associated factor 4b [Danio rerio]
gi|32698428|emb|CAD89006.1| TRAF4 protein [Danio rerio]
gi|50603841|gb|AAH78361.1| Tnf receptor-associated factor 4b [Danio rerio]
gi|182889872|gb|AAI65750.1| Traf4b protein [Danio rerio]
Length = 478
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C++K +EL EH+ H C + C + C +F+ E H VCP + + CE KC
Sbjct: 117 CSVKL-LRRELPEHLQHDCAKRKLHC--DHCGEQFTGEAYENHQGVCPEESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
++RR + +H ++ C + C +
Sbjct: 174 RMVRRLLAQHSVSECLKRKLPCRY 197
>gi|443691253|gb|ELT93162.1| hypothetical protein CAPTEDRAFT_156814 [Capitella teleta]
Length = 542
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 45/214 (21%)
Query: 161 HILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNE--GCNAKFS-AGHLEKHD 217
H+ KN DF C + K+L +H+ C F CPN+ GC + A ++E +
Sbjct: 101 HVFCKNKDFG----CTEQLKW-KDLPQHLFACKFQPKECPNKEFGCRENVTEADYMEHIE 155
Query: 218 SVCPFK---------------------------IIPCEQKCPDTLM-RRDMDRHCITVCQ 249
S C F+ + C C + M RRD+ RH + C
Sbjct: 156 SKCLFRKVECRFCKNKIFSSRLDDHQRGECQESFVKCLNDCGASAMKRRDLRRH-MAECP 214
Query: 250 MKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKS 309
M +CP+ +GC Q + +H L + +++ +++ KS
Sbjct: 215 MGDPSCPYMDIGCNFNAKNSTALQDHEESRATHHLRLAMNTIQEQRTEIVH------LKS 268
Query: 310 YFDKLAEAPDVRSLSFAIKDLEAKLGPFKEDTVN 343
++KL E R+L LE + F+E+ N
Sbjct: 269 LYEKLKEKN--RTLEKNHARLEISMNQFREELRN 300
>gi|403254596|ref|XP_003920048.1| PREDICTED: TNF receptor-associated factor 6 [Saimiri boliviensis
boliviensis]
Length = 523
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 26/134 (19%)
Query: 183 KELNEHMLHCGFISMICPN-------------------------EGCNAKFSAGHLEKHD 217
+ L +H +HC F M CP C A + E HD
Sbjct: 146 RHLEDHQVHCEFALMDCPQCQRPFQKCQINIHVLKDCPRRQVSCVNCAASMAFEDKEIHD 205
Query: 218 SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277
CP + CE C L+R M H C C F GC + + + +H +
Sbjct: 206 QNCPLANVLCE-YCNTVLIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQE 264
Query: 278 DLCSHLLYILQKLH 291
+ SH+ + Q +H
Sbjct: 265 NTQSHMRMLAQAVH 278
>gi|423654159|ref|ZP_17629458.1| hypothetical protein IKG_01147 [Bacillus cereus VD200]
gi|401296626|gb|EJS02243.1| hypothetical protein IKG_01147 [Bacillus cereus VD200]
Length = 262
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 458 RVNEEQKANEPGKVTKGEKVSEEGKANDTGKVNKEVRASEGRKVSEERNINEGKTNGVRV 517
+V E++KA E KV + +KV E+ KA + KV + +A E +KV E++ + E K +V
Sbjct: 188 KVEEQKKAEEQKKVEEQKKVEEQKKAEEQKKVEEHKKAEEQKKVEEQKKVEEQK----KV 243
Query: 518 NEEEKINAEGKV 529
E++K+ + K+
Sbjct: 244 EEQKKVEEQKKL 255
>gi|326489414|dbj|BAK01688.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 454
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCP-DTLMRRDMDRHCITVCQMKLA 253
+ + C NEGCN + G +H + C F+++ C + ++R++ D+H T C +
Sbjct: 52 LKLRCSNEGCNEVITRGIQAEHKNKCLFELVSCSHSLSCNKMLRKERDKHETTECPKRPT 111
Query: 254 NCP-------FYAV------GCQSTIPQCMIQQ---HRHDDLCSHL 283
C FY + C+ I C + H+ DL H+
Sbjct: 112 KCAQCSTTISFYRLTDHINNTCKEVIVSCTQECGEIHKRKDLAKHI 157
>gi|229191055|ref|ZP_04318045.1| 3D domain protein [Bacillus cereus ATCC 10876]
gi|228592453|gb|EEK50282.1| 3D domain protein [Bacillus cereus ATCC 10876]
Length = 510
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 348 EGKVNEEKKINE-VKPDGEGTINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNE 406
E KV EE K+ E VKP E + E + EE K+ K E+EK+ +K E K E
Sbjct: 270 EAKVKEEAKVQEIVKPKEEAKVKEEAKVKEEAKVQEIVKAKEEEKVQEIAKAKEEEKARE 329
Query: 407 QEKDSDGDVKEGKFTEGKNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKAN 466
+ + K E K EE++ + K E + E KA
Sbjct: 330 --------IAKAKEEEKAREIAKAKEEEKAR-----------EIAKAKEEEKAREIAKAK 370
Query: 467 EPGKVTKGEKVSEEGKANDTGKVNKEVRASE 497
E +V + K EE KA + K +E RA E
Sbjct: 371 EEERVREIAKAKEEEKAREIAKAKEEERAKE 401
>gi|423538415|ref|ZP_17514806.1| hypothetical protein IGK_00507 [Bacillus cereus HuB4-10]
gi|401176999|gb|EJQ84191.1| hypothetical protein IGK_00507 [Bacillus cereus HuB4-10]
Length = 296
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 27/145 (18%)
Query: 367 TINGEVNISEEGKINATDKVNEKEKISNKSKPNEGGKGNEQEKDSDGDVKEGKFTEGKNN 426
+ ++N++ E KV E++K+ + K E K EQ+K +
Sbjct: 172 ALQQQLNVALEA--EGQKKVEEQKKVEEQKKVEEQKKAEEQKKVEEQ------------- 216
Query: 427 GRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDT 486
+KV E+ ++ ++ K+ + +V E++KA E K + +K E+ KA +
Sbjct: 217 -KKVEEQKKVEEQ-----------KKVEEQKKVEEQKKAEEQKKAEEQKKAEEQKKAEEQ 264
Query: 487 GKVNKEVRASEGRKVSEERNINEGK 511
K ++ +A E +KV E++ + E K
Sbjct: 265 KKAEEQKKAEEQKKVEEQKKLEEQK 289
>gi|330793317|ref|XP_003284731.1| hypothetical protein DICPUDRAFT_28127 [Dictyostelium purpureum]
gi|325085331|gb|EGC38740.1| hypothetical protein DICPUDRAFT_28127 [Dictyostelium purpureum]
Length = 276
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 188 HMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITV 247
H+ C + S+ C + C+ + +E+H CP +I C++ C + + R +MD+H
Sbjct: 154 HISKCEYRSLNC--KYCSNVYLLKTIEQHYLECPSMLIDCKE-CNEKIKREEMDKHLDKE 210
Query: 248 CQMKLANCPFYAVGCQSTIPQ 268
CQ + +C F GC I +
Sbjct: 211 CQEVIISCKFLQFGCNDKIKR 231
>gi|194217834|ref|XP_001914971.1| PREDICTED: TNF receptor-associated factor 6-like [Equus caballus]
Length = 508
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 25/190 (13%)
Query: 162 ILLKNVDFKNEFHCNMKFNS---------EKELNEHML-HCGFISMICPNEGCNAKFSAG 211
ILL+N D ++ HC + + +LN HML C + C N C +
Sbjct: 111 ILLENQD--HQAHCEFALMNCPQCQHPFQKCQLNIHMLKECPRRQVSCVN--CAVSMAFE 166
Query: 212 HLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMI 271
E HD CP + CE C L+R M H C C F GC + + +
Sbjct: 167 DKEIHDQNCPLANVICE-YCNTMLIREQMPNHYDLDCPTAPIPCTFNTFGCHEKMQRNHL 225
Query: 272 QQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEA-------PDVRSLS 324
+H ++ SH+ + Q + + L + V + + +D + P+VR+
Sbjct: 226 ARHLQENTQSHMRMLAQAV---QSLSLALAPVPQRDMLPYDSAPLSRVSSGCYPEVRNFQ 282
Query: 325 FAIKDLEAKL 334
I+ LE +L
Sbjct: 283 ETIQQLEGRL 292
>gi|402561630|ref|YP_006604354.1| hypothetical protein BTG_14345 [Bacillus thuringiensis HD-771]
gi|401790282|gb|AFQ16321.1| hypothetical protein BTG_14345 [Bacillus thuringiensis HD-771]
Length = 274
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 427 GRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKVTKGEKVSEEGKANDT 486
G+K +EE + +EQ K + +V E++KA E KV + +K E+ KA +
Sbjct: 185 GQKKAEEQKKVEEQK----------KAEEQKKVEEQKKAEEQKKVEEQKKAEEQKKAEEQ 234
Query: 487 GKVNKEVRASEGRKVSEERNINEGK 511
KV ++ +A E +KV E++ I E K
Sbjct: 235 KKVEEQKKAEEQKKVEEQKKIEEQK 259
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,521,135,648
Number of Sequences: 23463169
Number of extensions: 381834475
Number of successful extensions: 1349568
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 13765
Number of HSP's that attempted gapping in prelim test: 1217098
Number of HSP's gapped (non-prelim): 76567
length of query: 533
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 386
effective length of database: 8,910,109,524
effective search space: 3439302276264
effective search space used: 3439302276264
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 79 (35.0 bits)