BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009502
(533 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P70191|TRAF5_MOUSE TNF receptor-associated factor 5 OS=Mus musculus GN=Traf5 PE=1 SV=1
Length = 558
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSV-- 219
+L +V KN CN + + +H+ HC F ++ CPNE C +++H S
Sbjct: 103 VLNLHVYCKNAPGCNARIILGR-FQDHLQHCSFQAVPCPNESCREAMLRKDVKEHLSAYC 161
Query: 220 --------------------------CPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA 253
CP + C +C T+ R ++ H +TVC
Sbjct: 162 RFREEKCLYCKRDIVVTNLQDHEENSCPAYPVSCPNRCVQTIPRARVNEH-LTVCPEAEQ 220
Query: 254 NCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDK 313
+CPF GC + + +H L H+L +L+K ++ L+ R+ +L +S K
Sbjct: 221 DCPFKHYGCTVKGKRGNLLEHERAALQDHMLLVLEKNYQ------LEQRISDLYQSLEQK 274
Query: 314 LAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ ++ L+ +K E +L F +
Sbjct: 275 ESK---IQQLAETVKKFEKELKQFTQ 297
>sp|Q86K46|Y7243_DICDI TNF receptor-associated factor family protein DDB_G0277243
OS=Dictyostelium discoideum GN=DDB_G0277243 PE=3 SV=1
Length = 423
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 39/162 (24%)
Query: 184 ELNEHMLHCGFISMICPNEG--CNAKFSAGHLEKHDSVCPFKIIPCE------------- 228
+L H+ C F+ + CPN+ C KF +KH + C + I CE
Sbjct: 121 QLESHLRECEFVFIECPNDPIRCKDKFRKNQTDKHMNKCQYVTINCEHCKEPVIKNDMPT 180
Query: 229 -------------QKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
+ C D RR ++ H C + +CP GC + I +C + QH
Sbjct: 181 HIENDCSIISLECEFCKDKFGRRSLENHIANECPNVVIDCPHKEGGCTARIKRCYLSQHL 240
Query: 276 HDDLCSHLLYILQKL---HR------DKPLKVLKNRVEELEK 308
++ +H+ Y +QK+ HR D+ +K L+ +ELEK
Sbjct: 241 TEED-NHIRY-MQKIIEKHRIQVEESDRIIKKLRVDYKELEK 280
>sp|O00463|TRAF5_HUMAN TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2
Length = 557
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDTLMRRDM 240
K+L EH+ C F C C +L+ H+ ++CP + C C +++ ++
Sbjct: 151 KDLKEHLSASCQFRKEKCLY--CKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEV 208
Query: 241 DRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLK 300
D H + VC +CPF GC T + +QQH H L H+ +L+K + L+
Sbjct: 209 DEH-LAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLVLEKNVQ------LE 261
Query: 301 NRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKE 339
++ +L KS K ++ ++ L+ IK LE + F +
Sbjct: 262 EQISDLHKSLEQKESK---IQQLAETIKKLEKEFKQFAQ 297
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 195 ISMICPNE-GCNAKFSAGHLEKHDSVCPFKIIPCE-QKCPDTLMRRDMDRHCITVCQMKL 252
+ + C N GCNAK G + H C F+ + C +KC + ++R+D+ H CQ +
Sbjct: 106 LYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRK 165
Query: 253 ANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C + C+ + +Q H ++LC
Sbjct: 166 EKCLY----CKKDVVVINLQNHE-ENLC 188
>sp|Q6DJN2|TRF6B_XENLA TNF receptor-associated factor 6-B OS=Xenopus laevis GN=traf6-b
PE=2 SV=1
Length = 556
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 185 LNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L +HM H CG + C N C + + H+ +CP + CE C L+R M H
Sbjct: 176 LEKHMEHECGRRKIFCDN--CGLAMAYEDMSGHELICPLAYVTCE-YCQTNLIREQMPSH 232
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
C M C +Y GC + + + +H D +H+ + Q L
Sbjct: 233 YSMDCTMAPIPCMYYEFGCTEKMQRNDLARHLQDFTQAHMRMMFQTL 279
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
CP++GC HLE+H C F + C Q C + + +++H
Sbjct: 136 CPSQGCTETMELRHLERHLGQCQFASVECSQ-CQGSFPKSRLEKH 179
>sp|Q61382|TRAF4_MOUSE TNF receptor-associated factor 4 OS=Mus musculus GN=Traf4 PE=1 SV=2
Length = 470
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP +PC +C T+ R D+ H C CPF
Sbjct: 194 PCAYCTKEFVYDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPTHLKDSCSTAFVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 ESGCKHRCPKLAMGRHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F ++PC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 181 SEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRD 239
S ++L H+ H C + C E C FS E H+ VCP + + CE KC +MRR
Sbjct: 122 SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGVCPQESVYCENKCGARMMRRL 179
Query: 240 MDRHCITVCQMKLANCPF 257
+ +H + C + C +
Sbjct: 180 LAQHATSECPKRTQPCAY 197
>sp|Q54FD5|Y0931_DICDI TNF receptor-associated factor family protein DDB_G0290931
OS=Dictyostelium discoideum GN=DDB_G0290931 PE=3 SV=1
Length = 511
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 177 MKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLM 236
++ NS L EH CGF + C C+ LE H CP +I C Q C +
Sbjct: 202 LRLNS---LKEHENQCGFKLVKCEYCACDGIIQV-QLENHYDECPKFVIGCPQGCLNFFE 257
Query: 237 RRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLY---ILQKLHR- 292
R + H C C +Y GC+ + + +Q RH + +H L+ ++ KL
Sbjct: 258 RDQIKSHIENDCNNSTIQCKYYEYGCKVEMKRSELQ--RHLENVNHQLFMGKLIDKLSST 315
Query: 293 -DKPLKVLKNRVEELEKS 309
D+ +K+ + ++E+EKS
Sbjct: 316 LDQSMKIQELLLKEIEKS 333
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+L+ H+ +C F + C + GC+ L++H++ C FK++ CE D +++ ++ H
Sbjct: 178 QLDRHIQNCKFKFVKCSHIGCDRVLRLNSLKEHENQCGFKLVKCEYCACDGIIQVQLENH 237
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHL 283
CP + +GC PQ + D + SH+
Sbjct: 238 --------YDECPKFVIGC----PQGCLNFFERDQIKSHI 265
>sp|Q9BUZ4|TRAF4_HUMAN TNF receptor-associated factor 4 OS=Homo sapiens GN=TRAF4 PE=1 SV=1
Length = 470
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 202 EGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVG 261
EGC HL+ H + C F +IPC +CP L RRD+ H C + C F G
Sbjct: 88 EGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF--CG 145
Query: 262 C 262
C
Sbjct: 146 C 146
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPD 233
C MK S ++L H+ H C + C E C FS E H+ +CP + + CE KC
Sbjct: 117 CPMKL-SRRDLPAHLQHDCPKRRLKC--EFCGCDFSGEAYESHEGMCPQESVYCENKCGA 173
Query: 234 TLMRRDMDRHCITVCQMKLANCPF 257
+MRR + +H + C + C +
Sbjct: 174 RMMRRLLAQHATSECPKRTQPCTY 197
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 200 PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKC-PDTLMRRDMDRHCITVCQMKLANCPFY 258
P C +F ++ H CP + C +C T+ R D+ H C L CPF
Sbjct: 194 PCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALVLCPFK 253
Query: 259 AVGCQSTIPQCMIQQHRHDDLCSHLLYILQKLHRDKP-LKVLKNRVEEL 306
GC+ P+ + +H + + HL + + R + L+ L+ +EEL
Sbjct: 254 DSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELEEL 302
>sp|Q3ZCC3|TRAF6_BOVIN TNF receptor-associated factor 6 OS=Bos taurus GN=TRAF6 PE=2 SV=1
Length = 542
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 87/250 (34%), Gaps = 46/250 (18%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCE------------- 228
+ L EH HC F M CP C F HL H CP + +PCE
Sbjct: 147 RHLEEHQAHCEFALMSCPQ--CQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEI 204
Query: 229 --QKCP----------DTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRH 276
Q CP L+R M H C C F A GC + + + +H
Sbjct: 205 HEQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNHLARHLQ 264
Query: 277 DDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEA-------PDVRSLSFAIKD 329
++ SH+ + Q + + L + V + +D + +V + I+
Sbjct: 265 ENTQSHMRMMAQAV---QTLSLAVAPVPQCTMPLYDSVPPTRPSSGRHSEVHNFQETIQQ 321
Query: 330 LEAKL----GPFKEDTVNRYSGEGKVNEEKKINEVKPDGEGTINGE----VNISEEGKIN 381
LE +L +E T + VNE K+ D I + + I + G
Sbjct: 322 LEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFG 381
Query: 382 ATDKVNEKEK 391
K E+EK
Sbjct: 382 MHLKSQEEEK 391
Score = 39.3 bits (90), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 50/236 (21%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
ILL+N F + F +++E+ M+ C PNEGC K HLE+H + C
Sbjct: 112 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEEHQAHCE 157
Query: 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKLA-------------------NCPFYAVGC 262
F ++ C Q C + ++ H + C + NCP V C
Sbjct: 158 FALMSCPQ-CQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVIC 216
Query: 263 QSTIPQCMIQQH-RHDDL--------CSHLLY-ILQKLHRDKPLKVLKNRVEELEKSYFD 312
+ + +Q H DL C+ + +K+ R+ L ++E +S+
Sbjct: 217 EYCNTMLIREQMPNHYDLDCPTAPVPCTFSAFGCHEKMQRNH----LARHLQENTQSHMR 272
Query: 313 KLAEAPDVRSLSFAIKDLEAKLGPFKEDTVNRYSGEGKVNEEKKINEVKPDGEGTI 368
+A+A V++LS A+ + P + G+ +E E EG +
Sbjct: 273 MMAQA--VQTLSLAVAPVPQCTMPLYDSVPPTRPSSGRHSEVHNFQETIQQLEGRL 326
>sp|Q60803|TRAF3_MOUSE TNF receptor-associated factor 3 OS=Mus musculus GN=Traf3 PE=1 SV=2
Length = 567
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 195 ISMICPNEG--CNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NEG C + + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 112 LQVYCRNEGRGCAEQLTLGHLLVHLKNECQFEELPCLRADCKEKVLRKDLRDHVEKACKY 171
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P MI+ +H+D
Sbjct: 172 REATCSH----CKSQVP--MIKLQKHED 193
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCP-DTLMRRD 239
K+L +H+ C + C + C ++ L+KH D+ CP ++ C KC TL+R +
Sbjct: 159 KDLRDHVEKACKYREATCSH--CKSQVPMIKLQKHEDTDCPCVVVSCPHKCSVQTLLRSE 216
Query: 240 MDRHCITVCQMKLANCPFYAVGC 262
+ H ++ C + C F GC
Sbjct: 217 LSAH-LSECVNAPSTCSFKRYGC 238
>sp|Q6IWL4|TRAF6_DANRE TNF receptor-associated factor 6 OS=Danio rerio GN=traf6 PE=2 SV=2
Length = 542
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 185 LNEH-MLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L+EH HC M CP+ C F + H+ CPF CE C L+R + H
Sbjct: 175 LDEHKSQHCLQRIMTCPD--CAGSFVYAVKQNHEQFCPFANTVCE-YCEMELIRDQLALH 231
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
C T C C F GC+ + + + QH + H+ Y+ + L
Sbjct: 232 CDTDCLKAPVACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFL 278
Score = 38.9 bits (89), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ C N GC+ K LEKH S C F PC Q C +++ +D H C ++
Sbjct: 131 LTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQ-CQESVPISHLDEHKSQHCLQRIMT 189
Query: 255 CP 256
CP
Sbjct: 190 CP 191
>sp|Q1ZXR0|Y8444_DICDI TNF receptor-associated factor family protein DDB_G0268444
OS=Dictyostelium discoideum GN=DDB_G0268444 PE=2 SV=1
Length = 502
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 31/122 (25%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-----------------DSV------- 219
E+ +H+ C F + C GCN +EKH D +
Sbjct: 126 EIEKHLKQCKFTHIKCKFIGCNKIIRLNQVEKHEKEQCEFRLEYCRYCDTDGITSRSLEN 185
Query: 220 ----CPFKIIPC-EQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQST--IPQCMIQ 272
CP I+ C E C L R ++ H CQM + +CP+ GC+ + P+ +
Sbjct: 186 HYKECPKFIVKCSENGCTVQLERSQLESHIEKQCQMVMIDCPYKIYGCEQSNRFPKSNLT 245
Query: 273 QH 274
QH
Sbjct: 246 QH 247
>sp|Q54FC5|Y0965_DICDI TNF receptor-associated factor family protein DDB_G0290965
OS=Dictyostelium discoideum GN=DDB_G0290965 PE=3 SV=1
Length = 575
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+L+ H+ +C F + C + GC+ L++H++ C +K++ C+ D ++++++ H
Sbjct: 130 QLDRHIQNCKFKFVECSHNGCDVVLRLNSLKEHENQCGYKLVKCKYCACDDTIQKELENH 189
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQ-CMIQQHRHDDLCSHL 283
CP + +GC PQ C I R D SH+
Sbjct: 190 --------NNECPKFPIGC----PQSCSIMVER-DQTQSHI 217
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 177 MKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLM 236
++ NS L EH CG+ + C C+ LE H++ CP I C Q C +
Sbjct: 154 LRLNS---LKEHENQCGYKLVKCKYCACDDTIQK-ELENHNNECPKFPIGCPQSCSIMVE 209
Query: 237 RRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
R H C C +Y GC+ + + +Q H
Sbjct: 210 RDQTQSHINNDCNNSTIQCKYYEYGCKVEMKRSELQNH 247
>sp|P11467|DG17_DICDI RING finger protein DG17 OS=Dictyostelium discoideum GN=zfaA PE=2
SV=2
Length = 460
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+++ H+++C + + C +GC LE H + C FK++ C+ D + +++++ H
Sbjct: 138 QIDSHLINCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVTCDFCKRDDIKKKELETH 197
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C M +C + GC I + I H +D C
Sbjct: 198 -YKTCPMVPIDC---SQGCSVKIERKSIIDHIENDCC 230
>sp|Q13114|TRAF3_HUMAN TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2
Length = 568
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 195 ISMICPNE--GCNAKFSAGHLEKH-DSVCPFKIIPCEQK-CPDTLMRRDMDRHCITVCQM 250
+ + C NE GC + GHL H + C F+ +PC + C + ++R+D+ H C+
Sbjct: 113 LQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKY 172
Query: 251 KLANCPFYAVGCQSTIPQCMIQQHRHDD 278
+ A C C+S +P +Q+H D
Sbjct: 173 REATCSH----CKSQVPMIALQKHEDTD 196
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 183 KELNEHM-LHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCP-DTLMRRD 239
K+L +H+ C + C + C ++ L+KH D+ CP ++ C KC TL+R +
Sbjct: 160 KDLRDHVEKACKYREATCSH--CKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSE 217
Query: 240 MDRHCITVCQMKLANCPFYAVGC 262
+ H ++ C + C F GC
Sbjct: 218 LSAH-LSECVNAPSTCSFKRYGC 239
>sp|Q557K0|Y3509_DICDI TNF receptor-associated factor family protein
DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum
GN=DDB_G0273433 PE=3 SV=1
Length = 450
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 47/188 (25%)
Query: 185 LNEHMLHCGFISMICPNEG--CNAKFSAGHLEKHD-SVCPFKIIPCEQ------------ 229
L H+ C + + CPN C +E H+ SVC + +I CE+
Sbjct: 127 LEHHLKECQYQFIKCPNNSNKCKYIIRKNQIEHHNQSVCDYSLIQCEKCSELIERKKLNK 186
Query: 230 --------------KCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
KC ++ ++ M+ H T C M+ +C + A GC + + QH
Sbjct: 187 HIESECDTLMITCSKCSASIGKKLMNHHLETDCPMEEISCLYKAGGCNKRFLRSQLSQHL 246
Query: 276 HDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLG 335
++ +H+ YI V +L K D+ + D R L +DLE +L
Sbjct: 247 SENN-NHIFYI--------------QNVMDLHKLQLDECNQ--DYRKLEKQNRDLEKRLF 289
Query: 336 PFKEDTVN 343
+ E TVN
Sbjct: 290 -YLESTVN 296
>sp|Q54FG0|Y0883_DICDI TNF receptor-associated factor family protein DDB_G0290883
OS=Dictyostelium discoideum GN=DDB_G0290883 PE=3 SV=1
Length = 460
Score = 40.0 bits (92), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 184 ELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
+++ H+++C + + C +GC LE H + C FK++ C+ D + +++++ H
Sbjct: 138 QIDSHLINCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVICDFCKRDDIKKKELETH 197
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLC 280
C M +C + GC I + I H +D C
Sbjct: 198 -YKTCPMVPIDC---SQGCSVKIERKSIIDHIENDCC 230
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 177 MKFNSEKELNEHMLHCGFISMICPNEGCNAK-FSAGHLEKHDSVCPFKIIPCEQKCPDTL 235
++ NS L H CGF +IC + C LE H CP I C Q C +
Sbjct: 162 LRMNS---LESHQNECGFKLVIC--DFCKRDDIKKKELETHYKTCPMVPIDCSQGCSVKI 216
Query: 236 MRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
R+ + H C C ++ GC+ + + +Q H
Sbjct: 217 ERKSIIDHIENDCCNTQIPCKYFEQGCKVEMKRSELQNH 255
>sp|B5DF45|TRAF6_RAT TNF receptor-associated factor 6 OS=Rattus norvegicus GN=Traf6 PE=2
SV=1
Length = 530
Score = 39.7 bits (91), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN+GC K HLE H C F ++ C Q C + +++H I C + +
Sbjct: 130 LTVKCPNKGCVQKMELRHLEDHQVHCEFALVICPQ-CQRFFQKCQINKHIIEDCPRRQVS 188
Query: 255 CPFYAVGCQSTIP 267
C V C +P
Sbjct: 189 C----VNCAVPMP 197
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 49/134 (36%), Gaps = 26/134 (19%)
Query: 183 KELNEHMLHCGFISMICPN---------------EGC--------NAKFSAGHLEK--HD 217
+ L +H +HC F +ICP E C N + EK HD
Sbjct: 146 RHLEDHQVHCEFALVICPQCQRFFQKCQINKHIIEDCPRRQVSCVNCAVPMPYEEKEIHD 205
Query: 218 SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277
CP I CE C L+R M H C C F GC + + + +H +
Sbjct: 206 QSCPLANIICE-YCGTILIREQMPNHYDLDCPTAPVPCTFSVFGCHEKMQRNHLARHLQE 264
Query: 278 DLCSHLLYILQKLH 291
+ H+ + Q +H
Sbjct: 265 NTQLHMRLLAQAVH 278
>sp|Q9Y4K3|TRAF6_HUMAN TNF receptor-associated factor 6 OS=Homo sapiens GN=TRAF6 PE=1 SV=1
Length = 522
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 30/136 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F M CP C F H+ E
Sbjct: 146 RHLEDHQAHCEFALMDCPQ--CQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEI 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP + CE C L+R M H C C F GC + + + +H
Sbjct: 204 HDQNCPLANVICE-YCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHL 262
Query: 276 HDDLCSHLLYILQKLH 291
++ SH+ + Q +H
Sbjct: 263 QENTQSHMRMLAQAVH 278
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
ILL+N F + F +++E+ M+ C PNEGC K HLE H + C
Sbjct: 111 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEDHQAHCE 156
Query: 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANC 255
F ++ C Q C + ++ H + C + +C
Sbjct: 157 FALMDCPQ-CQRPFQKFHINIHILKDCPRRQVSC 189
>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202
OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1
Length = 437
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-DSVCPFKIIPCEQKCPDTLMRRDMD 241
K L++H+ CGF CPN CN K +E+H D C I C + C T+ R DMD
Sbjct: 152 KNLDQHLQTCGFQLEDCPN--CNNKIIRKSIEEHIDEECLKTKIKCLE-CGSTVERGDMD 208
Query: 242 RHCITVCQMKLANCPFYAVGCQSTIPQCMIQQH 274
H VC + C GC + + H
Sbjct: 209 FHLDNVCPNIVIPCILCDNGCDLLFKRSELSNH 241
>sp|B6CJY5|TRAF6_MACMU TNF receptor-associated factor 6 OS=Macaca mulatta GN=TRAF6 PE=2
SV=1
Length = 522
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
ILL+N F + F +++E+ M+ C PNEGC K HLE H + C
Sbjct: 111 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEDHQAHCE 156
Query: 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANC 255
F ++ C Q C + ++ H + C + +C
Sbjct: 157 FALVDCPQ-CQRPFQKFHINIHILKDCPRRQVSC 189
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 30/136 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F + CP C F H+ E
Sbjct: 146 RHLEDHQAHCEFALVDCPQ--CQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEI 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP + CE C L+R M H C C F GC + + + +H
Sbjct: 204 HDQNCPLANVICE-YCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHL 262
Query: 276 HDDLCSHLLYILQKLH 291
++ SH+ + Q +H
Sbjct: 263 QENTQSHMRMLAQAVH 278
>sp|B6CJY4|TRAF6_CERAT TNF receptor-associated factor 6 OS=Cercocebus atys GN=TRAF6 PE=2
SV=1
Length = 522
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 162 ILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCP 221
ILL+N F + F +++E+ M+ C PNEGC K HLE H + C
Sbjct: 111 ILLENQLFPDNF-------AKREILSLMVKC-------PNEGCLHKMELRHLEDHQAHCE 156
Query: 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANC 255
F ++ C Q C + ++ H + C + +C
Sbjct: 157 FALVDCPQ-CQRPFQKFHINIHILKDCPRRQVSC 189
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 30/136 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F + CP C F H+ E
Sbjct: 146 RHLEDHQAHCEFALVDCPQ--CQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEI 203
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP + CE C L+R M H C C F GC + + + +H
Sbjct: 204 HDQNCPLANVICE-YCNTILIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHL 262
Query: 276 HDDLCSHLLYILQKLH 291
++ SH+ + Q +H
Sbjct: 263 QENTQSHMRMLAQAVH 278
>sp|P70196|TRAF6_MOUSE TNF receptor-associated factor 6 OS=Mus musculus GN=Traf6 PE=1 SV=2
Length = 530
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 49/134 (36%), Gaps = 26/134 (19%)
Query: 183 KELNEHMLHCGFISMICPN---------------EGC--------NAKFSAGHLEK--HD 217
+ L +H +HC F + CP E C N S + EK HD
Sbjct: 146 RHLEDHQVHCEFALVNCPQCQRPFQKCQVNTHIIEDCPRRQVSCVNCAVSMAYEEKEIHD 205
Query: 218 SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277
CP I CE C L+R M H C C F GC + + + +H +
Sbjct: 206 QSCPLANIICE-YCGTILIREQMPNHYDLDCPTAPIPCTFSVFGCHEKMQRNHLARHLQE 264
Query: 278 DLCSHLLYILQKLH 291
+ H+ + Q +H
Sbjct: 265 NTQLHMRLLAQAVH 278
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN+GC K HLE H C F ++ C Q C + ++ H I C + +
Sbjct: 130 LTVKCPNKGCLQKMELRHLEDHQVHCEFALVNCPQ-CQRPFQKCQVNTHIIEDCPRRQVS 188
Query: 255 CPFYAVG 261
C AV
Sbjct: 189 CVNCAVS 195
>sp|Q557K2|Y3435_DICDI TNF receptor-associated factor family protein
DDB_G0273435/DDB_G0273505 OS=Dictyostelium discoideum
GN=DDB_G0273435 PE=3 SV=1
Length = 409
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 187 EHMLHCGFISMIC-PNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCI 245
+H+ C F + C NE C K+ +E H C + C C + R ++ H +
Sbjct: 117 KHLKECKFTFVSCEYNEKC-GKYRMNEIENHQDQCNYYPTKCFY-CKNDFERMNLSNHLL 174
Query: 246 TVCQMKLANCPFYAVGCQSTIPQCMIQQH-----RHDDLCSHLLYILQKLHR--DKPLKV 298
C + + C + GC T P+ + +H H S+++ Q L + K LK
Sbjct: 175 LDCPLVIIGCRYKDGGCNETFPRHELSKHLALEDNHQQYISNIINGHQSLLKSTSKQLKQ 234
Query: 299 LKNRVEELEKSYFDKLAEAPDVRSLSFAIKDLEAKLGPFKED 340
L++ EELE KL + + IK A FKE+
Sbjct: 235 LRSSCEELE----TKLINNDYSFNGRWIIKQFSAHFDLFKEN 272
>sp|Q28DL4|TRAF6_XENTR TNF receptor-associated factor 6 OS=Xenopus tropicalis GN=traf6
PE=2 SV=1
Length = 558
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 30/135 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKH-------------------------- 216
+ L H++ C F + C C + F L+KH
Sbjct: 148 RHLERHLVRCDFAGVEC--SQCQSSFPKYSLQKHKFEECPRRQIFCENCAVAMALEDKLN 205
Query: 217 -DSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
D CP + CE C L+R M H C M C +Y GC + + + +H
Sbjct: 206 HDQTCPLAYVTCE-YCQTNLIREQMPAHYSMDCTMAPIPCMYYEFGCTEKMQRNDLARHL 264
Query: 276 HDDLCSHLLYILQKL 290
+ +H+ + Q L
Sbjct: 265 QEFTQAHMRMMAQTL 279
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFY 258
CP++GC HLE+H C F + C Q C + + + +H K CP
Sbjct: 136 CPSQGCTETMELRHLERHLVRCDFAGVECSQ-CQSSFPKYSLQKH-------KFEECPRR 187
Query: 259 AVGCQ-STIPQCMIQQHRHDDLCSHLLYI 286
+ C+ + + + HD C L Y+
Sbjct: 188 QIFCENCAVAMALEDKLNHDQTCP-LAYV 215
>sp|A7XUJ6|TRAF6_PIG TNF receptor-associated factor 6 OS=Sus scrofa GN=TRAF6 PE=2 SV=1
Length = 541
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 45/135 (33%), Gaps = 30/135 (22%)
Query: 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHL---------------------------EK 215
+ L +H HC F M CP C F L E
Sbjct: 147 RHLEDHQAHCEFALMNCPQ--CQRPFQKCQLNIHILKECPRRQVSCVNCAVSMAFEDKEI 204
Query: 216 HDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHR 275
HD CP + CE C L+R M H C C F GC + + + +H
Sbjct: 205 HDQNCPLANVICE-YCNTVLIREQMPNHYDLDCPTAPVPCTFSTFGCHEKMQRNHLARHL 263
Query: 276 HDDLCSHLLYILQKL 290
++ SH+ + Q L
Sbjct: 264 QENTQSHMRMMAQAL 278
Score = 35.8 bits (81), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 195 ISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLAN 254
+++ CPN GC K HLE H + C F ++ C Q C + ++ H + C + +
Sbjct: 131 LTVKCPNVGCLHKMELRHLEDHQAHCEFALMNCPQ-CQRPFQKCQLNIHILKECPRRQVS 189
Query: 255 CPFYAVG 261
C AV
Sbjct: 190 CVNCAVS 196
>sp|Q3MV19|TRF6A_XENLA TNF receptor-associated factor 6-A OS=Xenopus laevis GN=traf6-a
PE=1 SV=1
Length = 556
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Query: 185 LNEHMLH-CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
L++HM H CG C N C + H+ +CP + C+ C L+R M H
Sbjct: 176 LDKHMEHECGRRRTFCDN--CGLAMAYEDKSGHELICPMAYVTCD-YCQTNLIREQMPAH 232
Query: 244 CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLYILQKL 290
C M C + GC+ + + + H D +H+ + Q L
Sbjct: 233 YSMDCTMAPIPCMYCEFGCREKMQRHNLAGHLQDFTQAHMRMMAQTL 279
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 199 CPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH 243
CPN GC HLE H C F + C Q C + ++ +D+H
Sbjct: 136 CPNLGCTDTMELRHLEHHLVQCQFASVECSQ-CQGSFLKLLLDKH 179
>sp|Q55GA8|Y7744_DICDI TNF receptor-associated factor family protein DDB_G0267744
OS=Dictyostelium discoideum GN=DDB_G0267744 PE=3 SV=1
Length = 429
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 199 CPN-----EGCNAKFS----AGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQ 249
CPN E C+ + + H+E H K++ + C + R + + H T+C
Sbjct: 156 CPNSLIKCEHCSIEITRSKQTDHIENH----CLKVLKQCEFCFKLIERGEFNNHQDTICL 211
Query: 250 MKLANCPFYAVGCQSTIPQCMIQQHRHDDLCSHLLY 285
KL CPF GC + + I++H HLLY
Sbjct: 212 SKLIKCPFNEGGCVDLVKRSDIKEHLSVLAGEHLLY 247
>sp|Q12933|TRAF2_HUMAN TNF receptor-associated factor 2 OS=Homo sapiens GN=TRAF2 PE=1 SV=2
Length = 501
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 9/113 (7%)
Query: 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQ 263
C A ++ H VCP + C+ + R H + C C F+A+GC
Sbjct: 166 CRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDH-VKTCGKCRVPCRFHAIGCL 224
Query: 264 STIPQCMIQQHRHDDLCSHLLYILQKLHRDKPL--------KVLKNRVEELEK 308
T+ Q+H L HL +L + KPL L R E LEK
Sbjct: 225 ETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEK 277
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
SV=1
Length = 486
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 364 GEGTING-----EVNISEEGKINATDKVNEKEKISNKSKPNEGGKGN--EQEKDSDGDVK 416
G GT+ G E+N+ E + + S ++KPN G GN E + S G+ +
Sbjct: 167 GGGTMQGQCQSNELNVGEPHNDVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQ 226
Query: 417 EGKFTEG-----KNNGRKVSEEDRIHDEQNVNREGTIDGGKINNETRVNEEQKANEPGKV 471
+G+ T K NG+K SE + H Q E +G + + N+EQ N PGK
Sbjct: 227 KGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNG-----DEKRNDEQSPNSPGKK 281
Query: 472 TKGEKVSEEGK 482
+ K ++GK
Sbjct: 282 SNSGK--QQGK 290
>sp|Q55A66|Y2098_DICDI TNF receptor-associated factor family protein DDB_G0272098
OS=Dictyostelium discoideum GN=DDB_G0272098 PE=3 SV=1
Length = 1084
Score = 32.7 bits (73), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 206 AKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQST 265
K + L++HD C ++ I CE C + + R D + H C ++ P C+
Sbjct: 156 GKINKSLLDEHDEQCLYQTITCEH-CNELINRIDHEIHLSEWC----SDIPIKCEDCKHV 210
Query: 266 IPQCMIQQHR 275
+ IQ+H+
Sbjct: 211 FKKKYIQEHK 220
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 208,685,654
Number of Sequences: 539616
Number of extensions: 9606845
Number of successful extensions: 36892
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 1225
Number of HSP's that attempted gapping in prelim test: 29784
Number of HSP's gapped (non-prelim): 5047
length of query: 533
length of database: 191,569,459
effective HSP length: 122
effective length of query: 411
effective length of database: 125,736,307
effective search space: 51677622177
effective search space used: 51677622177
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)