Query 009502
Match_columns 533
No_of_seqs 254 out of 1179
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 06:38:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009502.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009502hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yuc_A TNF receptor-associated 99.3 3.1E-13 1E-17 109.7 1.0 72 183-257 3-75 (76)
2 2yuc_A TNF receptor-associated 99.2 7.6E-12 2.6E-16 101.4 3.5 66 211-280 3-68 (76)
3 3hcs_A TNF receptor-associated 99.2 1.5E-11 5.1E-16 113.5 5.4 85 156-250 76-161 (170)
4 3hcs_A TNF receptor-associated 99.1 2E-11 6.9E-16 112.6 4.6 82 194-280 80-161 (170)
5 2yre_A F-box only protein 30; 98.7 4.1E-09 1.4E-13 91.5 3.3 60 219-281 34-93 (100)
6 2d9k_A FLN29 gene product; zin 98.7 8.5E-10 2.9E-14 89.2 -1.9 67 182-252 2-69 (75)
7 2d9k_A FLN29 gene product; zin 98.4 5.3E-08 1.8E-12 78.6 0.3 65 210-280 2-67 (75)
8 2yre_A F-box only protein 30; 97.9 3.4E-06 1.2E-10 73.3 2.4 61 192-256 35-98 (100)
9 1flk_A TNF receptor associated 97.7 3.3E-05 1.1E-09 74.9 5.2 76 251-349 8-89 (228)
10 2eod_A TNF receptor-associated 97.6 1.9E-05 6.5E-10 60.6 2.1 61 191-253 5-66 (66)
11 2dlq_A GLI-kruppel family memb 96.6 0.0018 6.3E-08 53.9 4.3 98 172-276 10-115 (124)
12 2a25_A Ubiquitin ligase SIAH1; 96.4 0.00081 2.8E-08 64.0 1.6 50 167-217 7-59 (193)
13 2eod_A TNF receptor-associated 95.6 0.0046 1.6E-07 47.0 2.2 54 218-277 4-59 (66)
14 2jp9_A Wilms tumor 1; DNA bind 95.6 0.0068 2.3E-07 50.2 3.3 104 167-276 7-117 (119)
15 2i13_A AART; DNA binding, zinc 95.3 0.007 2.4E-07 54.8 2.5 81 174-257 82-166 (190)
16 2i13_A AART; DNA binding, zinc 95.2 0.0084 2.9E-07 54.3 2.7 97 173-276 53-154 (190)
17 1ubd_C Protein (YY1 zinc finge 94.4 0.066 2.3E-06 44.7 6.0 105 167-276 6-115 (124)
18 2a25_A Ubiquitin ligase SIAH1; 93.0 0.027 9.3E-07 53.4 1.3 46 231-277 16-61 (193)
19 2gli_A Protein (five-finger GL 92.8 0.11 3.8E-06 44.9 4.8 108 167-276 35-151 (155)
20 2ee8_A Protein ODD-skipped-rel 92.5 0.1 3.5E-06 42.4 4.0 68 173-243 21-92 (106)
21 1tf6_A Protein (transcription 92.4 0.2 6.8E-06 45.1 6.2 101 173-276 48-157 (190)
22 2dmd_A Zinc finger protein 64, 92.2 0.094 3.2E-06 41.7 3.4 69 173-244 12-84 (96)
23 2csh_A Zinc finger protein 297 91.6 0.14 4.8E-06 41.9 3.9 41 175-217 15-57 (110)
24 2yt9_A Zinc finger-containing 91.1 0.093 3.2E-06 41.7 2.1 33 174-208 12-45 (95)
25 2wbs_A Krueppel-like factor 4; 90.8 0.16 5.4E-06 39.7 3.3 36 173-208 11-47 (89)
26 2ebt_A Krueppel-like factor 5; 90.8 0.18 6.3E-06 40.2 3.7 41 167-208 16-57 (100)
27 2dmi_A Teashirt homolog 3; zin 90.5 0.18 6.2E-06 41.6 3.5 17 174-190 24-40 (115)
28 2kmk_A Zinc finger protein GFI 90.3 0.11 3.9E-06 39.7 1.9 34 173-208 5-39 (82)
29 2dmi_A Teashirt homolog 3; zin 90.3 0.13 4.3E-06 42.6 2.3 87 183-276 5-101 (115)
30 1a1h_A QGSR zinc finger peptid 90.1 0.15 5.2E-06 39.8 2.6 42 174-217 11-54 (90)
31 2yt9_A Zinc finger-containing 90.1 0.22 7.5E-06 39.4 3.5 75 195-276 6-86 (95)
32 2dmd_A Zinc finger protein 64, 89.3 0.2 6.8E-06 39.8 2.7 76 194-276 6-85 (96)
33 2ee8_A Protein ODD-skipped-rel 88.9 0.32 1.1E-05 39.3 3.7 75 195-276 16-94 (106)
34 1tf6_A Protein (transcription 88.5 0.46 1.6E-05 42.6 4.9 106 167-277 13-128 (190)
35 2dlq_A GLI-kruppel family memb 88.4 0.25 8.7E-06 40.7 2.9 71 172-245 38-115 (124)
36 2gli_A Protein (five-finger GL 88.0 0.23 7.7E-06 42.9 2.3 104 169-275 4-119 (155)
37 2rpc_A Zinc finger protein ZIC 87.7 0.38 1.3E-05 41.7 3.6 101 172-276 28-143 (155)
38 1a1h_A QGSR zinc finger peptid 87.5 0.18 6.2E-06 39.4 1.4 78 195-277 3-84 (90)
39 2lt7_A Transcriptional regulat 87.5 0.15 5.1E-06 44.9 0.9 72 172-246 25-100 (133)
40 2kmk_A Zinc finger protein GFI 87.2 0.17 5.7E-06 38.8 1.0 73 197-276 2-78 (82)
41 1wjp_A Zinc finger protein 295 87.2 0.17 5.8E-06 41.5 1.0 69 172-244 19-89 (107)
42 3knv_A TNF receptor-associated 86.8 0.18 6.1E-06 45.4 1.0 33 155-193 97-130 (141)
43 1rmd_A RAG1; V(D)J recombinati 86.7 0.19 6.5E-06 42.8 1.1 70 204-279 41-113 (116)
44 2ebt_A Krueppel-like factor 5; 86.4 0.54 1.8E-05 37.4 3.6 79 194-276 13-96 (100)
45 3hct_A TNF receptor-associated 86.3 0.18 6.2E-06 43.4 0.7 27 167-195 83-109 (118)
46 3hct_A TNF receptor-associated 86.2 0.36 1.2E-05 41.4 2.6 28 195-222 81-108 (118)
47 2dlk_A Novel protein; ZF-C2H2 85.3 0.64 2.2E-05 35.5 3.4 64 167-232 8-75 (79)
48 1llm_C Chimera of ZIF23-GCN4; 84.9 0.048 1.7E-06 43.3 -3.3 33 174-208 8-41 (88)
49 2csh_A Zinc finger protein 297 84.1 0.48 1.7E-05 38.6 2.3 77 194-278 8-88 (110)
50 2rpc_A Zinc finger protein ZIC 84.0 0.88 3E-05 39.3 4.1 84 172-255 65-153 (155)
51 2wbs_A Krueppel-like factor 4; 83.7 0.68 2.3E-05 35.9 3.0 78 195-276 4-86 (89)
52 2jp9_A Wilms tumor 1; DNA bind 82.4 0.48 1.7E-05 38.8 1.7 74 167-244 37-116 (119)
53 2l7x_A Envelope glycoprotein; 81.3 0.88 3E-05 37.2 2.7 46 174-223 10-55 (77)
54 1rmd_A RAG1; V(D)J recombinati 81.1 0.69 2.4E-05 39.3 2.2 27 167-195 89-115 (116)
55 1ubd_C Protein (YY1 zinc finge 81.0 0.88 3E-05 37.7 2.8 74 172-245 37-115 (124)
56 2j7j_A Transcription factor II 80.3 0.57 1.9E-05 35.9 1.3 45 173-217 7-53 (85)
57 3knv_A TNF receptor-associated 79.6 0.58 2E-05 42.0 1.3 30 194-223 102-132 (141)
58 1wjv_A Cell growth regulating 78.6 1.1 3.8E-05 37.3 2.6 41 173-216 14-55 (79)
59 2k9h_A Glycoprotein; hantaviru 77.3 1.9 6.6E-05 33.6 3.4 47 172-222 6-54 (57)
60 2epa_A Krueppel-like factor 10 75.5 2.9 9.8E-05 31.4 4.0 51 166-217 17-69 (72)
61 2cot_A Zinc finger protein 435 74.9 1.8 6E-05 33.1 2.7 34 173-208 22-56 (77)
62 2dlk_A Novel protein; ZF-C2H2 74.4 1.3 4.3E-05 33.7 1.7 62 195-257 6-73 (79)
63 2l7x_A Envelope glycoprotein; 74.3 0.51 1.7E-05 38.6 -0.5 46 203-252 10-56 (77)
64 1wjv_A Cell growth regulating 74.0 1.7 5.9E-05 36.2 2.5 49 192-243 6-55 (79)
65 2cot_A Zinc finger protein 435 71.1 3.8 0.00013 31.2 3.8 55 194-251 16-73 (77)
66 1bbo_A Human enhancer-binding 70.9 3.1 0.00011 29.5 3.0 43 173-217 5-49 (57)
67 2lt7_A Transcriptional regulat 70.6 1.1 3.6E-05 39.3 0.5 77 193-276 19-99 (133)
68 1wjp_A Zinc finger protein 295 70.3 0.69 2.4E-05 37.7 -0.7 74 194-276 14-90 (107)
69 2ctd_A Zinc finger protein 512 70.0 1.1 3.7E-05 37.0 0.4 48 193-243 31-81 (96)
70 3vhs_A ATPase wrnip1; zinc fin 69.4 1.1 3.9E-05 29.9 0.4 24 195-220 5-28 (29)
71 1x5w_A Zinc finger protein 64, 68.0 3.6 0.00012 30.7 3.0 33 174-208 14-47 (70)
72 1x6h_A Transcriptional repress 67.5 4.5 0.00015 30.9 3.6 43 173-217 19-67 (86)
73 1x6e_A Zinc finger protein 24; 67.0 3.8 0.00013 30.8 3.0 34 174-209 19-53 (72)
74 1ca9_A TRAF2, protein (TNF rec 65.2 6.4 0.00022 36.3 4.7 30 319-348 25-55 (192)
75 2gkw_A TNF receptor-associated 65.1 5.1 0.00017 37.3 4.0 31 319-349 22-53 (192)
76 4ghu_A TNF receptor-associated 64.7 4.7 0.00016 37.9 3.7 31 319-349 22-53 (198)
77 2lce_A B-cell lymphoma 6 prote 64.7 4.7 0.00016 30.4 3.1 44 172-217 20-65 (74)
78 3uk3_C Zinc finger protein 217 64.6 4.2 0.00015 28.7 2.7 34 173-208 8-42 (57)
79 2adr_A ADR1; transcription reg 64.5 4.9 0.00017 28.8 3.1 34 173-208 6-40 (60)
80 1x6h_A Transcriptional repress 63.8 2 7E-05 32.9 0.9 62 193-257 12-80 (86)
81 2lv2_A Insulinoma-associated p 63.7 4.2 0.00014 33.2 2.8 44 172-217 31-76 (85)
82 1x5w_A Zinc finger protein 64, 63.1 3.5 0.00012 30.8 2.1 47 224-275 9-57 (70)
83 1x6e_A Zinc finger protein 24; 62.7 3.4 0.00012 31.1 1.9 49 223-276 13-63 (72)
84 1llm_C Chimera of ZIF23-GCN4; 62.0 0.35 1.2E-05 38.2 -4.0 34 239-276 18-52 (88)
85 2adr_A ADR1; transcription reg 60.5 3.8 0.00013 29.4 1.8 35 197-234 3-39 (60)
86 4gzn_C ZFP-57, zinc finger pro 60.1 5.6 0.00019 30.3 2.8 33 174-208 9-42 (60)
87 2ctu_A Zinc finger protein 483 59.2 1.5 5.1E-05 32.5 -0.7 65 184-257 5-72 (73)
88 2drp_A Protein (tramtrack DNA- 55.4 8.1 0.00028 28.2 2.9 35 173-209 14-51 (66)
89 1f2i_G Fusion of N-terminal 17 54.7 9.7 0.00033 28.3 3.3 48 167-217 20-69 (73)
90 2vy4_A U11/U12 small nuclear r 54.3 6.5 0.00022 28.0 2.1 17 262-278 12-28 (37)
91 2lv2_A Insulinoma-associated p 54.3 5 0.00017 32.7 1.7 50 222-276 26-77 (85)
92 2drp_A Protein (tramtrack DNA- 52.7 4.4 0.00015 29.7 1.0 48 224-276 10-61 (66)
93 1bbo_A Human enhancer-binding 50.6 5.4 0.00018 28.2 1.2 19 239-257 16-34 (57)
94 2d9h_A Zinc finger protein 692 49.0 7.5 0.00026 29.4 1.9 43 173-217 11-58 (78)
95 2lce_A B-cell lymphoma 6 prote 47.0 6.8 0.00023 29.5 1.3 47 224-275 17-65 (74)
96 3uk3_C Zinc finger protein 217 45.9 6.3 0.00022 27.8 0.9 46 225-275 5-52 (57)
97 2ctd_A Zinc finger protein 512 45.6 13 0.00043 30.4 2.8 42 173-216 38-81 (96)
98 2gqj_A Zinc finger protein KIA 45.3 7.8 0.00027 31.2 1.5 47 224-275 24-74 (98)
99 2ct1_A Transcriptional repress 44.6 14 0.00047 27.9 2.7 42 174-217 20-65 (77)
100 3vhs_A ATPase wrnip1; zinc fin 44.5 8 0.00028 25.9 1.1 22 221-243 3-24 (29)
101 4gzn_C ZFP-57, zinc finger pro 43.8 6.9 0.00024 29.8 0.9 12 195-208 3-14 (60)
102 2ct1_A Transcriptional repress 43.5 7.1 0.00024 29.6 0.9 49 223-276 14-66 (77)
103 2d9h_A Zinc finger protein 692 41.3 8.8 0.0003 29.1 1.1 7 251-257 37-43 (78)
104 2eps_A POZ-, at HOOK-, and zin 40.5 22 0.00074 25.2 3.1 35 173-209 16-52 (54)
105 2lo3_A SAGA-associated factor 40.1 13 0.00045 27.6 1.8 30 165-195 13-43 (44)
106 2gqj_A Zinc finger protein KIA 38.7 8 0.00027 31.2 0.5 16 174-189 29-45 (98)
107 4gjh_A TNF receptor-associated 37.1 14 0.00048 33.7 2.0 31 319-349 6-37 (178)
108 2ytg_A ZFP-95, zinc finger pro 35.1 23 0.00078 23.8 2.4 35 222-257 10-45 (46)
109 2wbt_A B-129; zinc finger; 2.7 35.0 9.7 0.00033 31.7 0.5 48 183-234 61-109 (129)
110 2vy4_A U11/U12 small nuclear r 34.2 12 0.0004 26.7 0.7 30 222-252 3-32 (37)
111 2epq_A POZ-, at HOOK-, and zin 32.3 26 0.00088 23.5 2.3 28 173-200 14-42 (45)
112 1f2i_G Fusion of N-terminal 17 31.5 20 0.00069 26.5 1.7 50 223-276 18-70 (73)
113 2kw0_A CCMH protein; oxidoredu 31.2 71 0.0024 27.0 5.2 46 32-79 10-55 (90)
114 1d00_A Tumor necrosis factor r 30.2 14 0.00049 32.9 0.8 30 320-349 2-32 (168)
115 2hl7_A Cytochrome C-type bioge 27.5 92 0.0031 25.9 5.2 47 31-79 12-58 (84)
116 2epr_A POZ-, at HOOK-, and zin 26.8 37 0.0013 23.2 2.3 27 174-200 17-44 (48)
117 2eme_A Zinc finger protein 473 26.7 45 0.0015 22.2 2.7 27 174-200 17-44 (46)
118 2elz_A Zinc finger protein 224 26.1 46 0.0016 22.3 2.7 28 173-200 16-44 (46)
119 2ely_A Zinc finger protein 224 25.9 53 0.0018 21.9 3.0 28 173-200 16-44 (46)
120 2eov_A Zinc finger protein 484 25.5 50 0.0017 21.9 2.8 28 173-200 16-44 (46)
121 2ytr_A Zinc finger protein 347 25.2 47 0.0016 22.0 2.6 28 173-200 16-44 (46)
122 2em5_A ZFP-95, zinc finger pro 24.5 45 0.0016 22.3 2.4 27 174-200 17-44 (46)
123 2wbt_A B-129; zinc finger; 2.7 24.1 43 0.0015 27.6 2.7 43 172-217 77-120 (129)
124 2eml_A Zinc finger protein 28 23.8 53 0.0018 21.9 2.6 27 174-200 17-44 (46)
125 2epw_A Zinc finger protein 268 23.7 56 0.0019 21.7 2.8 27 174-200 17-44 (46)
126 2emk_A Zinc finger protein 28 23.5 54 0.0018 21.9 2.7 28 173-200 16-44 (46)
127 2ghf_A ZHX1, zinc fingers and 23.5 18 0.00062 30.3 0.2 54 173-228 22-83 (102)
128 2eop_A Zinc finger protein 268 23.1 53 0.0018 21.8 2.6 28 173-200 16-44 (46)
129 2em8_A Zinc finger protein 224 23.0 47 0.0016 22.2 2.3 28 173-200 16-44 (46)
130 2em0_A Zinc finger protein 224 22.9 55 0.0019 21.8 2.6 28 173-200 16-44 (46)
131 2epz_A Zinc finger protein 28 22.9 56 0.0019 21.7 2.7 27 174-200 17-44 (46)
132 2ep0_A Zinc finger protein 28 22.8 51 0.0018 21.9 2.4 27 174-200 17-44 (46)
133 2eq4_A Zinc finger protein 224 22.7 54 0.0019 21.7 2.5 28 173-200 16-44 (46)
134 2ytn_A Zinc finger protein 347 22.6 59 0.002 21.6 2.7 27 174-200 17-44 (46)
135 2el4_A Zinc finger protein 268 22.5 54 0.0019 21.7 2.5 27 174-200 17-44 (46)
136 2em9_A Zinc finger protein 224 22.5 54 0.0018 21.8 2.5 27 174-200 17-44 (46)
137 2eoe_A Zinc finger protein 347 22.2 49 0.0017 22.0 2.2 28 173-200 16-44 (46)
138 2ytm_A Zinc finger protein 28 22.1 50 0.0017 22.2 2.2 28 173-200 16-44 (46)
139 2emm_A ZFP-95, zinc finger pro 22.0 49 0.0017 22.0 2.2 28 173-200 16-44 (46)
140 2ytd_A Zinc finger protein 473 22.0 56 0.0019 21.7 2.5 28 173-200 16-44 (46)
141 2en8_A Zinc finger protein 224 22.0 52 0.0018 21.8 2.3 16 174-189 17-32 (46)
142 2ytq_A Zinc finger protein 268 21.9 58 0.002 21.7 2.6 28 173-200 16-44 (46)
143 2em7_A Zinc finger protein 224 21.9 55 0.0019 21.8 2.4 27 174-200 17-44 (46)
144 2emy_A Zinc finger protein 268 21.7 56 0.0019 21.7 2.5 28 173-200 16-44 (46)
145 2yso_A ZFP-95, zinc finger pro 21.6 59 0.002 21.6 2.5 28 173-200 16-44 (46)
146 2eoq_A Zinc finger protein 224 21.4 62 0.0021 21.5 2.6 28 173-200 16-44 (46)
147 2emp_A Zinc finger protein 347 21.3 51 0.0018 21.9 2.2 28 173-200 16-44 (46)
148 2el6_A Zinc finger protein 268 21.1 65 0.0022 21.5 2.7 27 174-200 17-44 (46)
149 2yu8_A Zinc finger protein 347 21.1 50 0.0017 22.0 2.1 28 173-200 16-44 (46)
150 2ghf_A ZHX1, zinc fingers and 21.1 66 0.0023 26.8 3.2 61 194-257 16-84 (102)
151 2epx_A Zinc finger protein 28 21.0 62 0.0021 21.5 2.5 28 173-200 16-45 (47)
152 2ene_A Zinc finger protein 347 20.8 62 0.0021 21.5 2.5 17 174-190 17-33 (46)
153 2ysp_A Zinc finger protein 224 20.7 46 0.0016 22.2 1.8 27 174-200 17-44 (46)
154 2eoo_A ZFP-95, zinc finger pro 20.6 50 0.0017 22.1 2.0 28 173-200 16-44 (46)
155 2en1_A Zinc finger protein 224 20.1 54 0.0018 21.8 2.0 27 174-200 17-44 (46)
No 1
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=99.30 E-value=3.1e-13 Score=109.71 Aligned_cols=72 Identities=25% Similarity=0.491 Sum_probs=65.8
Q ss_pred hhHHHHHhhcCCceeeCCCCCCCCccccchhhhhcC-cCCCcceeccCCCCCccccccccccccccccccccCCCC
Q 009502 183 KELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDS-VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPF 257 (533)
Q Consensus 183 keLe~Hle~C~yR~V~CpN~gC~e~~~~~dLq~H~~-~Cp~rpV~Cpn~Cg~kI~R~eLe~Hl~~eCPkr~V~CpF 257 (533)
.+|+.|+..|+|++|.||+ +|+..+.+.+|+.|.. .||++++.|+ +|+..+.+.+|+.|. ..||.+++.|++
T Consensus 3 ~~l~~H~~~C~~~~v~C~~-~C~~~v~r~~l~~H~~~~C~~r~v~C~-~C~~~~~~~~l~~H~-~~Cp~~~v~C~~ 75 (76)
T 2yuc_A 3 SGSSGHLNTCSFNVIPCPN-RCPMKLSRRDLPAHLQHDCPKRRLKCE-FCGCDFSGEAYESHE-GMCPQESSGPSS 75 (76)
T ss_dssp CSCSCCCCCCCCSCCBCTT-CCSCBCCSSSSTTTTTTSCTTSCCCCS-SSCCCCCHHHHHHTT-TSCTTSSCCCSC
T ss_pred hHHHHHHHHCCCcccCCCc-cccHHhhHhHHHhhCHhhCCCcceECC-CCCCccCHHHHHHHH-hHCCCCccCCCC
Confidence 5677899889999999987 8999999999999997 8999999998 799999999999995 789999999987
No 2
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=99.18 E-value=7.6e-12 Score=101.42 Aligned_cols=66 Identities=27% Similarity=0.567 Sum_probs=61.4
Q ss_pred chhhhhcCcCCCcceeccCCCCCccccccccccccccccccccCCCCCcCCCCCCCchhHHHHHHhhchh
Q 009502 211 GHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLC 280 (533)
Q Consensus 211 ~dLq~H~~~Cp~rpV~Cpn~Cg~kI~R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~R~eL~~He~ecl~ 280 (533)
.+|+.|+..|++++|.||+.|+..|+|.+|+.|+..+||++++.|+| |...+.+.+|+.|...|..
T Consensus 3 ~~l~~H~~~C~~~~v~C~~~C~~~v~r~~l~~H~~~~C~~r~v~C~~----C~~~~~~~~l~~H~~~Cp~ 68 (76)
T 2yuc_A 3 SGSSGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEF----CGCDFSGEAYESHEGMCPQ 68 (76)
T ss_dssp CSCSCCCCCCCCSCCBCTTCCSCBCCSSSSTTTTTTSCTTSCCCCSS----SCCCCCHHHHHHTTTSCTT
T ss_pred hHHHHHHHHCCCcccCCCccccHHhhHhHHHhhCHhhCCCcceECCC----CCCccCHHHHHHHHhHCCC
Confidence 57889999999999999889999999999999987799999999999 9999999999999977654
No 3
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=99.17 E-value=1.5e-11 Score=113.51 Aligned_cols=85 Identities=29% Similarity=0.634 Sum_probs=73.2
Q ss_pred hhhhcccCCceeecccCCCCcccccCchhHHHHHhhcCCceeeCCCCCCCCccccchhhhhc-CcCCCcceeccCCCCCc
Q 009502 156 REAIAHILLKNVDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHD-SVCPFKIIPCEQKCPDT 234 (533)
Q Consensus 156 REIlal~LLkeV~C~N~~GC~ekv~trkeLe~Hle~C~yR~V~CpN~gC~e~~~~~dLq~H~-~~Cp~rpV~Cpn~Cg~k 234 (533)
+.+.++. |.|+| .||.|.+ .+.++..|+..|+|+++.|+ +|++.+.+.+|+.|. ..||++++.|+ +|+..
T Consensus 76 ~~i~~l~----v~C~n-~GC~~~~-~~~~l~~H~~~C~~~~v~C~--~C~~~~~r~~l~~H~~~~C~~r~~~C~-~C~~~ 146 (170)
T 3hcs_A 76 REILSLM----VKCPN-EGCLHKM-ELRHLEDHQAHCEFALMDCP--QCQRPFQKFHINIHILKDCPRRQVSCD-NCAAS 146 (170)
T ss_dssp HHHHTSE----EECCS-TTCCCEE-EGGGHHHHHTTCTTSEEECT--TTCCEEEGGGHHHHHHHTCTTCEEECT-TTCCE
T ss_pred HHHhhcc----cCCCC-CCCCcee-cHhHHHHHHhcCCceeeECC--CCChHHHHHHHHHHhhhhCCCCCeECC-CCCCc
Confidence 3345556 99998 7999999 69999999988999999998 899999999999999 58999999998 89999
Q ss_pred cccccccccccccccc
Q 009502 235 LMRRDMDRHCITVCQM 250 (533)
Q Consensus 235 I~R~eLe~Hl~~eCPk 250 (533)
+++.+|+.|. ..|+.
T Consensus 147 ~~~~~l~~H~-~~~~~ 161 (170)
T 3hcs_A 147 MAFEDKEIHD-QNCPL 161 (170)
T ss_dssp EEGGGHHHHH-TTCCC
T ss_pred cCHHHHHhHH-HhCcC
Confidence 9999999994 55543
No 4
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=99.14 E-value=2e-11 Score=112.62 Aligned_cols=82 Identities=24% Similarity=0.582 Sum_probs=76.9
Q ss_pred CceeeCCCCCCCCccccchhhhhcCcCCCcceeccCCCCCccccccccccccccccccccCCCCCcCCCCCCCchhHHHH
Q 009502 194 FISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQ 273 (533)
Q Consensus 194 yR~V~CpN~gC~e~~~~~dLq~H~~~Cp~rpV~Cpn~Cg~kI~R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~R~eL~~ 273 (533)
...|.|+|.||.+.+.+.+++.|+..|+++++.|| .|+..++|.+|..|+...||.+.+.|+| |...+++.+|+.
T Consensus 80 ~l~v~C~n~GC~~~~~~~~l~~H~~~C~~~~v~C~-~C~~~~~r~~l~~H~~~~C~~r~~~C~~----C~~~~~~~~l~~ 154 (170)
T 3hcs_A 80 SLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCP-QCQRPFQKFHINIHILKDCPRRQVSCDN----CAASMAFEDKEI 154 (170)
T ss_dssp TSEEECCSTTCCCEEEGGGHHHHHTTCTTSEEECT-TTCCEEEGGGHHHHHHHTCTTCEEECTT----TCCEEEGGGHHH
T ss_pred hcccCCCCCCCCceecHhHHHHHHhcCCceeeECC-CCChHHHHHHHHHHhhhhCCCCCeECCC----CCCccCHHHHHh
Confidence 46789998899999999999999999999999999 8999999999999977899999999998 999999999999
Q ss_pred HHhhchh
Q 009502 274 HRHDDLC 280 (533)
Q Consensus 274 He~ecl~ 280 (533)
|.+.+..
T Consensus 155 H~~~~~~ 161 (170)
T 3hcs_A 155 HDQNCPL 161 (170)
T ss_dssp HHTTCCC
T ss_pred HHHhCcC
Confidence 9987654
No 5
>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=4.1e-09 Score=91.54 Aligned_cols=60 Identities=22% Similarity=0.427 Sum_probs=55.5
Q ss_pred cCCCcceeccCCCCCccccccccccccccccccccCCCCCcCCCCCCCchhHHHHHHhhchhH
Q 009502 219 VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLCS 281 (533)
Q Consensus 219 ~Cp~rpV~Cpn~Cg~kI~R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~R~eL~~He~ecl~e 281 (533)
.|+ ++.||+.|+..+.|.+|+.|+ ..||+..++|+|..+||++++.|.+|.+|++.|+..
T Consensus 34 ~C~--~i~CP~~Cga~i~rckL~EH~-~~CP~a~v~C~~~~yGCp~~~~R~~L~~He~~CPas 93 (100)
T 2yre_A 34 SCD--LIGCPLVCGAVFHSCKADEHR-LLCPFERVPCLNSDFGCPFTMARNKVAEHLEMCPAS 93 (100)
T ss_dssp CCC--EEECTTCCSCEEEHHHHHHHH-HHCSSSEEECTTTTTTCCCEEESSTHHHHHHTCGGG
T ss_pred eee--eeeCCcccCCeeehhhHHHHH-hhcccccccccccCcCCceeecHHHHHHHHhhCCce
Confidence 575 999999999999999999995 789999999999999999999999999999988654
No 6
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=8.5e-10 Score=89.24 Aligned_cols=67 Identities=21% Similarity=0.490 Sum_probs=57.9
Q ss_pred chhHHHHHh-hcCCceeeCCCCCCCCccccchhhhhcCcCCCcceeccCCCCCccccccccccccccccccc
Q 009502 182 EKELNEHML-HCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKL 252 (533)
Q Consensus 182 rkeLe~Hle-~C~yR~V~CpN~gC~e~~~~~dLq~H~~~Cp~rpV~Cpn~Cg~kI~R~eLe~Hl~~eCPkr~ 252 (533)
+.+|..|+. .|+++++.|+ +|+..|...+|+.|...||.+++.|+ .|+..+.|.+|..| ...||..+
T Consensus 2 ~~~L~~H~~~~c~~r~~~C~--~C~~~~~~~~L~~H~~~c~~~~~~C~-~C~~~~~~~~l~~H-~~~c~~~~ 69 (75)
T 2d9k_A 2 SSGSSGHEETECPLRLAVCQ--HCDLELSILKLKEHEDYCGARTELCG-NCGRNVLVKDLKTH-PEVCGREG 69 (75)
T ss_dssp CCCCSCCCCCCCCCCCEECS--SSCCEECHHHHHHHHHHHHHCEEECS-SSCCEEETTGGGTH-HHHBTTBS
T ss_pred chHHHhhCcccCCCcccCCc--ccChHhhHHHHHHHHhHcCCCceEcc-cCCCcCcHHHHHHH-HHHccCCc
Confidence 457788886 4999999999 89999999999999988999999998 69988999999999 46788754
No 7
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=5.3e-08 Score=78.65 Aligned_cols=65 Identities=17% Similarity=0.356 Sum_probs=58.6
Q ss_pred cchhhhhcC-cCCCcceeccCCCCCccccccccccccccccccccCCCCCcCCCCCCCchhHHHHHHhhchh
Q 009502 210 AGHLEKHDS-VCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDLC 280 (533)
Q Consensus 210 ~~dLq~H~~-~Cp~rpV~Cpn~Cg~kI~R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~R~eL~~He~ecl~ 280 (533)
..+|+.|.. .||++++.|+ .|+..+.+..|..|. ..||.+++.|++ |...+.|.+|..|...+..
T Consensus 2 ~~~L~~H~~~~c~~r~~~C~-~C~~~~~~~~L~~H~-~~c~~~~~~C~~----C~~~~~~~~l~~H~~~c~~ 67 (75)
T 2d9k_A 2 SSGSSGHEETECPLRLAVCQ-HCDLELSILKLKEHE-DYCGARTELCGN----CGRNVLVKDLKTHPEVCGR 67 (75)
T ss_dssp CCCCSCCCCCCCCCCCEECS-SSCCEECHHHHHHHH-HHHHHCEEECSS----SCCEEETTGGGTHHHHBTT
T ss_pred chHHHhhCcccCCCcccCCc-ccChHhhHHHHHHHH-hHcCCCceEccc----CCCcCcHHHHHHHHHHccC
Confidence 457889995 7999999998 799999999999996 899999999998 9999999999999987654
No 8
>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.92 E-value=3.4e-06 Score=73.28 Aligned_cols=61 Identities=30% Similarity=0.762 Sum_probs=55.5
Q ss_pred cCCceeeCCCCCCCCccccchhhhhcCcCCCcceeccC---CCCCccccccccccccccccccccCCC
Q 009502 192 CGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQ---KCPDTLMRRDMDRHCITVCQMKLANCP 256 (533)
Q Consensus 192 C~yR~V~CpN~gC~e~~~~~dLq~H~~~Cp~rpV~Cpn---~Cg~kI~R~eLe~Hl~~eCPkr~V~Cp 256 (533)
|. ++.||| .|+..+.+..|++|...||...++|++ +|..++.|.+|..| ...||...+.|.
T Consensus 35 C~--~i~CP~-~Cga~i~rckL~EH~~~CP~a~v~C~~~~yGCp~~~~R~~L~~H-e~~CPas~v~~~ 98 (100)
T 2yre_A 35 CD--LIGCPL-VCGAVFHSCKADEHRLLCPFERVPCLNSDFGCPFTMARNKVAEH-LEMCPASVSGPS 98 (100)
T ss_dssp CC--EEECTT-CCSCEEEHHHHHHHHHHCSSSEEECTTTTTTCCCEEESSTHHHH-HHTCGGGCCCCC
T ss_pred ee--eeeCCc-ccCCeeehhhHHHHHhhcccccccccccCcCCceeecHHHHHHH-HhhCCceeEecC
Confidence 76 999997 899999999999999999999999996 69999999999999 578999888765
No 9
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=97.67 E-value=3.3e-05 Score=74.89 Aligned_cols=76 Identities=12% Similarity=-0.002 Sum_probs=45.0
Q ss_pred cccCCCCCcCCCCCCC-----chhHHHHHHhhchhHHHHHHHHHhhcCCchhHHHHHHHHHHHhhhhhhccchhHHHHHH
Q 009502 251 KLANCPFYAVGCQSTI-----PQCMIQQHRHDDLCSHLLYILQKLHRDKPLKVLKNRVEELEKSYFDKLAEAPDVRSLSF 325 (533)
Q Consensus 251 r~V~CpF~~~GC~~kv-----~R~eL~~He~ecl~eHL~lL~~~i~lgckv~dLr~rLqehe~ss~~~L~e~r~I~sL~~ 325 (533)
..+.|||...||.+++ +|..|++|+...+..|+.+++..+ ..+.. .|..|..
T Consensus 8 ~~i~c~~~~~gc~~~~~~~~~~r~~~~~h~~~~~~~h~~~~~~~i-------------~~~~~----------~i~~~~~ 64 (228)
T 1flk_A 8 DSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQML-------------SVHDI----------RLADMDL 64 (228)
T ss_dssp ----------------CTTTTTTTTTHHHHHHHHHHHHHHHHHHH-------------HHHHH----------HHHHHHH
T ss_pred hheeccccccCceeeccccccchhHHHHHHHHHHHHHHHHHHHHH-------------HHHHH----------HHHHHHH
Confidence 4589999999999999 999999999999999998876432 12211 4556666
Q ss_pred HHHHHHHH-hCCceeeccccccccc
Q 009502 326 AIKDLEAK-LGPFKEDTVNRYSGEG 349 (533)
Q Consensus 326 ~VkdLE~K-i~~le~WKI~~ysqkg 349 (533)
.+..++.. ..+.+.|+|++|++..
T Consensus 65 ~l~~l~~~~~~g~~~wkI~nfS~~~ 89 (228)
T 1flk_A 65 RFQVLETASYNGVLIWKIRDYKRRK 89 (228)
T ss_dssp HHHHHHTCCSSSEEEEEEECHHHHH
T ss_pred HHHHhhccCcCcEEEEEECCHHHHH
Confidence 67777765 7888999999999753
No 10
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.61 E-value=1.9e-05 Score=60.59 Aligned_cols=61 Identities=23% Similarity=0.509 Sum_probs=50.5
Q ss_pred hcCCceeeCCCCCCCCccccchhhhhcCcCCCcceeccCCCCCc-ccccccccccccccccccc
Q 009502 191 HCGFISMICPNEGCNAKFSAGHLEKHDSVCPFKIIPCEQKCPDT-LMRRDMDRHCITVCQMKLA 253 (533)
Q Consensus 191 ~C~yR~V~CpN~gC~e~~~~~dLq~H~~~Cp~rpV~Cpn~Cg~k-I~R~eLe~Hl~~eCPkr~V 253 (533)
.|+++++.|+ .|+..|....|..|...+...+..|++.|+.. ..+..|..|+...||.+++
T Consensus 5 ~C~~~~~~C~--~C~k~f~~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~i 66 (66)
T 2eod_A 5 SSGKRTQPCT--YCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALV 66 (66)
T ss_dssp CCCCCEEECS--SSCCEEEHHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCCC
T ss_pred cCCCCCeecc--ccCCccCHHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhcccCcC
Confidence 4999999999 89999998889999866889999997569976 5567899997667887654
No 11
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.55 E-value=0.0018 Score=53.94 Aligned_cols=98 Identities=21% Similarity=0.370 Sum_probs=74.2
Q ss_pred CCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcC----cCCCcceeccCCCCCccc-cccccccc
Q 009502 172 EFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDS----VCPFKIIPCEQKCPDTLM-RRDMDRHC 244 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~----~Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl 244 (533)
|..|+..+.+...|..|+.. -..++..|+ .|+..+. ...|..|.. .-...+..|+ .|+.... +..|..|+
T Consensus 10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~ 86 (124)
T 2dlq_A 10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTCS-VCQETFRRRMELRLHM 86 (124)
T ss_dssp CTTTCCCCSSHHHHHHHHHHHSSCCSCBCT--TTCCBCSSHHHHHHHHHHCCCCSCCCCEECS-SSCCEESSHHHHHHHH
T ss_pred CCCCCCcCCCHHHHHHHHHhCCCCCCeECC--CCCchhcCHHHHHHHHhhhhcCCCCCCeECC-CCCCccCCHHHHHHHH
Confidence 45799998777889999875 777889999 8999884 556777763 2456788998 7997755 56789997
Q ss_pred cccccccccCCCCCcCCCCCCCc-hhHHHHHHh
Q 009502 245 ITVCQMKLANCPFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 245 ~~eCPkr~V~CpF~~~GC~~kv~-R~eL~~He~ 276 (533)
...-...+..|++ |...+. +..|..|+.
T Consensus 87 ~~h~~~~~~~C~~----C~~~f~~~~~l~~H~~ 115 (124)
T 2dlq_A 87 VSHTGEMPYKCSS----CSQQFMQKKDLQSHMI 115 (124)
T ss_dssp HHHSSSCSEECSS----SCCEESSHHHHHHHHH
T ss_pred HHcCCCCCccCCC----ccchhCCHHHHHHHHH
Confidence 6666677889998 886554 456778875
No 12
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=96.44 E-value=0.00081 Score=63.99 Aligned_cols=50 Identities=24% Similarity=0.407 Sum_probs=19.2
Q ss_pred eecccC-CCCcccccCchhHHHHHhhcCCceeeCCCCC--CCCccccchhhhhc
Q 009502 167 VDFKNE-FHCNMKFNSEKELNEHMLHCGFISMICPNEG--CNAKFSAGHLEKHD 217 (533)
Q Consensus 167 V~C~N~-~GC~ekv~trkeLe~Hle~C~yR~V~CpN~g--C~e~~~~~dLq~H~ 217 (533)
+-|+|. .||.+.+ ...++..|.+.|+|++..||.++ |.|......|..|.
T Consensus 7 ~pC~~~~~GC~~~~-~y~~~~~He~~C~f~p~~Cp~~g~~C~~~G~~~~l~~H~ 59 (193)
T 2a25_A 7 FPCKYASSGCEITL-PHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHL 59 (193)
T ss_dssp ------------------------------CEECCCC--CCCCEECSTTHHHHH
T ss_pred ecCCCCCCCCCccc-ccccccchhhcCCCCCccCCCCCCCCcCCCCHHHHHHHH
Confidence 779984 7999999 58999999999999999999866 99999999998887
No 13
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.64 E-value=0.0046 Score=47.02 Aligned_cols=54 Identities=19% Similarity=0.429 Sum_probs=45.1
Q ss_pred CcCCCcceeccCCCCCccccccccccccccccccccCCC-CCcCCCCCC-CchhHHHHHHhh
Q 009502 218 SVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKLANCP-FYAVGCQST-IPQCMIQQHRHD 277 (533)
Q Consensus 218 ~~Cp~rpV~Cpn~Cg~kI~R~eLe~Hl~~eCPkr~V~Cp-F~~~GC~~k-v~R~eL~~He~e 277 (533)
..|+.++..|+ .|+..+.+..|..|+.. +..++..|+ . |... ..+..|..|...
T Consensus 4 ~~C~~~~~~C~-~C~k~f~~~~L~~H~~~-~~~~p~~C~~~----C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 4 GSSGKRTQPCT-YCTKEFVFDTIQSHQYQ-CPRLPVACPNQ----CGVGTVAREDLPGHLKD 59 (66)
T ss_dssp SCCCCCEEECS-SSCCEEEHHHHHHHHHH-CSSSEEECTTC----CSCCEEETTTHHHHHHT
T ss_pred ccCCCCCeecc-ccCCccCHHHHHHHHHH-cCCcCccCCcc----cCcccccHHHHHHHHHh
Confidence 46999999998 89987778899999766 999999999 6 9876 455689999764
No 14
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=95.62 E-value=0.0068 Score=50.21 Aligned_cols=104 Identities=21% Similarity=0.391 Sum_probs=74.0
Q ss_pred eecccCCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccc
Q 009502 167 VDFKNEFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDR 242 (533)
Q Consensus 167 V~C~N~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~ 242 (533)
..|.. ++|+..+.+...|..|+.. -..++..|+.+.|+..+. ...|..|+.. -...+..|+ .|+.... +..|..
T Consensus 7 ~~C~~-~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~ 84 (119)
T 2jp9_A 7 FMCAY-PGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK-TCQRKFSRSDHLKT 84 (119)
T ss_dssp BCCCS-TTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECT-TTCCEESCHHHHHH
T ss_pred eeCCC-CCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCC-ccCchhCCHHHHHH
Confidence 34542 4799999777889999875 667889998446999885 4556677632 345678998 7997655 567889
Q ss_pred cccccccccccCC--CCCcCCCCCCCc-hhHHHHHHh
Q 009502 243 HCITVCQMKLANC--PFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 243 Hl~~eCPkr~V~C--pF~~~GC~~kv~-R~eL~~He~ 276 (533)
|+...-...+..| +. |...+. +..|..|+.
T Consensus 85 H~~~h~~~~~~~C~~~~----C~~~f~~~~~L~~H~~ 117 (119)
T 2jp9_A 85 HTRTHTGEKPFSCRWPS----CQKKFARSDELVRHHN 117 (119)
T ss_dssp HHHHHHTCCCEECCSTT----CCCEESSHHHHHHHHH
T ss_pred HHHHhcCCCCeeCCCCC----CccccCCHHHHHHHHh
Confidence 9766666677888 55 886554 467888864
No 15
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=95.32 E-value=0.007 Score=54.80 Aligned_cols=81 Identities=26% Similarity=0.485 Sum_probs=34.3
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-ccccccccccccc
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCITVCQ 249 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCP 249 (533)
.|+..+.+...|..|+.. ...++..|+ .|+..+. ...|..|+.. -...+..|+ .|+.... +..|..|+...-.
T Consensus 82 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 82 ECGKSFSQRANLRAHQRTHTGEKPYACP--ECGKSFSQLAHLRAHQRTHTGEKPYKCP-ECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp TTCCEESCHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHHHHHHCCCCEECT-TTCCEESCHHHHHHHHHHHHC
T ss_pred ccCCccCCHHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhCCCCCeECC-CCCcccCCHHHHHHHHHhcCC
Confidence 344444334444455433 344444554 4555443 2223334321 223344454 4554332 2344555433333
Q ss_pred ccccCCCC
Q 009502 250 MKLANCPF 257 (533)
Q Consensus 250 kr~V~CpF 257 (533)
.++..|++
T Consensus 159 ~~~~~C~~ 166 (190)
T 2i13_A 159 EKPYKCPE 166 (190)
T ss_dssp CCCEECTT
T ss_pred CCCeECCC
Confidence 34445554
No 16
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=95.20 E-value=0.0084 Score=54.26 Aligned_cols=97 Identities=24% Similarity=0.449 Sum_probs=68.7
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcC-cCCCcceeccCCCCCccc-cccccccccccc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDS-VCPFKIIPCEQKCPDTLM-RRDMDRHCITVC 248 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~-~Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eC 248 (533)
..|+..+.+...|..|+.. ...++..|+ .|+..+. ...|..|.. .-...+..|+ .|+.... ...|..|+...-
T Consensus 53 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~ 129 (190)
T 2i13_A 53 PECGKSFSDKKDLTRHQRTHTGEKPYKCP--ECGKSFSQRANLRAHQRTHTGEKPYACP-ECGKSFSQLAHLRAHQRTHT 129 (190)
T ss_dssp TTTCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHTCCCEECT-TTCCEESSHHHHHHHHHHHH
T ss_pred CCcCchhCCHHHHHHHHHhcCCCCCccCc--ccCCccCCHHHHHHHHHhcCCCCCCcCC-CCCCccCCHHHHHHHHHHhC
Confidence 4688888666788888765 677788898 8988874 455666763 2445678887 7986654 457888866555
Q ss_pred cccccCCCCCcCCCCCCCc-hhHHHHHHh
Q 009502 249 QMKLANCPFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 249 Pkr~V~CpF~~~GC~~kv~-R~eL~~He~ 276 (533)
...+..|++ |...+. +..|..|+.
T Consensus 130 ~~~~~~C~~----C~~~f~~~~~L~~H~~ 154 (190)
T 2i13_A 130 GEKPYKCPE----CGKSFSREDNLHTHQR 154 (190)
T ss_dssp CCCCEECTT----TCCEESCHHHHHHHHH
T ss_pred CCCCeECCC----CCcccCCHHHHHHHHH
Confidence 667778887 876554 456777764
No 17
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.40 E-value=0.066 Score=44.67 Aligned_cols=105 Identities=19% Similarity=0.405 Sum_probs=75.2
Q ss_pred eecccCCCCcccccCchhHHHHHhhcCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccC-CCCCccc-cccccc
Q 009502 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQ-KCPDTLM-RRDMDR 242 (533)
Q Consensus 167 V~C~N~~GC~ekv~trkeLe~Hle~C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn-~Cg~kI~-R~eLe~ 242 (533)
+.|+. ..|+..+.+...|..|+..-..++..|+ .|+..+. ...|..|... -...+..|+- .|+.... ...|..
T Consensus 6 ~~C~~-~~C~~~f~~~~~l~~H~~~h~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~ 82 (124)
T 1ubd_C 6 IACPH-KGCTKMFRDNSAMRKHLHTHGPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 82 (124)
T ss_dssp EECCS-TTCCCEESSHHHHHHHHGGGSCCCEECT--TTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred ccCCC-CCCcCccCCHHHHHHHHHHcCCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence 55663 5899999767889999865466788999 8999985 4567788743 4567889972 5997755 467889
Q ss_pred cccccccccccCCCCCcCCCCCCC-chhHHHHHHh
Q 009502 243 HCITVCQMKLANCPFYAVGCQSTI-PQCMIQQHRH 276 (533)
Q Consensus 243 Hl~~eCPkr~V~CpF~~~GC~~kv-~R~eL~~He~ 276 (533)
|+...-..++..|++ -+|...+ .+..|..|..
T Consensus 83 H~~~h~~~~~~~C~~--~~C~~~f~~~~~L~~H~~ 115 (124)
T 1ubd_C 83 HVRIHTGDRPYVCPF--DGCNKKFAQSTNLKSHIL 115 (124)
T ss_dssp HHHHHHCCCCCCCCS--TTCCCCCSSTTTTHHHHH
T ss_pred HHHHhCCCCceECCC--CCCCCccCCHHHHHHHHH
Confidence 976555667788874 2477554 3456777765
No 18
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=93.01 E-value=0.027 Score=53.43 Aligned_cols=46 Identities=20% Similarity=0.381 Sum_probs=17.5
Q ss_pred CCCccccccccccccccccccccCCCCCcCCCCCCCchhHHHHHHhh
Q 009502 231 CPDTLMRRDMDRHCITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHD 277 (533)
Q Consensus 231 Cg~kI~R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~R~eL~~He~e 277 (533)
|...++-.++..| +..|+.++..||+....|++.+....|..|...
T Consensus 16 C~~~~~y~~~~~H-e~~C~f~p~~Cp~~g~~C~~~G~~~~l~~H~~~ 61 (193)
T 2a25_A 16 CEITLPHTEKADH-EELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 61 (193)
T ss_dssp ---------------------CEECCCC--CCCCEECSTTHHHHHHH
T ss_pred CCcccccccccch-hhcCCCCCccCCCCCCCCcCCCCHHHHHHHHHH
Confidence 5555555555555 355666666666543348888888888888863
No 19
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.81 E-value=0.11 Score=44.92 Aligned_cols=108 Identities=22% Similarity=0.290 Sum_probs=70.5
Q ss_pred eeccc--CCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccC-CCCCccc-ccc
Q 009502 167 VDFKN--EFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQ-KCPDTLM-RRD 239 (533)
Q Consensus 167 V~C~N--~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn-~Cg~kI~-R~e 239 (533)
..|.. |..|...+.+...|..|+.. -..++..|+.+.|+..+. ...|..|+.. -...+..|+. .|+.... +..
T Consensus 35 ~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~ 114 (155)
T 2gli_A 35 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASD 114 (155)
T ss_dssp CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSST
T ss_pred eeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHH
Confidence 44553 45666777666788888765 666788897445998885 4457777733 3456788972 3986654 567
Q ss_pred ccccc-cccccccccCCCCCcCCCCCCC-chhHHHHHHh
Q 009502 240 MDRHC-ITVCQMKLANCPFYAVGCQSTI-PQCMIQQHRH 276 (533)
Q Consensus 240 Le~Hl-~~eCPkr~V~CpF~~~GC~~kv-~R~eL~~He~ 276 (533)
|..|+ ...-..++..|++ -+|...+ .+..|..|+.
T Consensus 115 L~~H~~~~H~~~~~~~C~~--~~C~~~f~~~~~L~~H~~ 151 (155)
T 2gli_A 115 RAKHQNRTHSNEKPYVCKL--PGCTKRYTDPSSLRKHVK 151 (155)
T ss_dssp THHHHHHTTCSCCCEECCS--TTTCCEESSHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeeCCC--CCCccccCCHHHHHHHHH
Confidence 88886 3344556677864 2577654 3456777765
No 20
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=92.51 E-value=0.1 Score=42.42 Aligned_cols=68 Identities=22% Similarity=0.402 Sum_probs=38.3
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-ccccccc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRH 243 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~H 243 (533)
..|+..+.....|..|+.. -..++..|+ .|+..|. ...|..|+.. -...+..|+ .|+.... +..|..|
T Consensus 21 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H 92 (106)
T 2ee8_A 21 KFCGRHFTKSYNLLIHERTHTDERPYTCD--ICHKAFRRQDHLRDHRYIHSKEKPFKCQ-ECGKGFCQSRTLAVH 92 (106)
T ss_dssp SSSCCBCSSHHHHHHHHHHHCCSCCCBCS--SSCCBCSCHHHHHHHGGGSCCCCTTSCS-SSCCCCSSHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCCCCCcCCC--CccchhCCHHHHHHHHHHhCCCCCeECC-CcCCcccCHHHHHHH
Confidence 4677777555677778754 555667777 6777664 3445566532 233445554 4554332 3345555
No 21
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=92.44 E-value=0.2 Score=45.10 Aligned_cols=101 Identities=23% Similarity=0.522 Sum_probs=57.3
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhc-CcC--CCcceec--cCCCCCccc-cccccccc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHD-SVC--PFKIIPC--EQKCPDTLM-RRDMDRHC 244 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~-~~C--p~rpV~C--pn~Cg~kI~-R~eLe~Hl 244 (533)
..|+..+.+...|..|+.. -..++..|+.+.|+..+. ...|..|. ..- ...+..| + .|+.... +..|..|+
T Consensus 48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~-~C~k~f~~~~~L~~H~ 126 (190)
T 1tf6_A 48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFE-NCGKAFKKHNQLKVHQ 126 (190)
T ss_dssp TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSS-SSCEECSSHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCC-CCccccCCHHHHHHHH
Confidence 4677777555667777654 455666776445777664 34455665 222 2345667 4 5775543 45666775
Q ss_pred cccccccccCCCCCcCCCCCCCc-hhHHHHHHh
Q 009502 245 ITVCQMKLANCPFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 245 ~~eCPkr~V~CpF~~~GC~~kv~-R~eL~~He~ 276 (533)
...-..++..|++ .+|...+. +..|..|+.
T Consensus 127 ~~H~~~~~~~C~~--~~C~k~F~~~~~L~~H~~ 157 (190)
T 1tf6_A 127 FSHTQQLPYECPH--EGCDKRFSLPSRLKRHEK 157 (190)
T ss_dssp GGGSSSCSSBCCS--SSCCCBCSSHHHHHHHHT
T ss_pred HHhCCCCCccCCC--CCCCchhcCHHHHHHHHH
Confidence 5444555566653 24665443 355666664
No 22
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.23 E-value=0.094 Score=41.72 Aligned_cols=69 Identities=22% Similarity=0.417 Sum_probs=36.5
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHC 244 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl 244 (533)
..|+..+.+...|..|+.. -..++..|+ .|+..+. ...|..|+.. -...+..|+ .|+.... +..|..|+
T Consensus 12 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~ 84 (96)
T 2dmd_A 12 EVCGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLRIHSDERPFKCQ-ICPYASRNSSQLTVHL 84 (96)
T ss_dssp TTTTBCCCCHHHHHHHGGGCCCCCSEECS--SSCCEESSHHHHHHHHHHSCCCCCEECS-SSSCEESSHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHhcCCCCCEeCC--CCCCccCCHHHHHHHHHHhCCCCCccCC-CCCCccCCHHHHHHHH
Confidence 4566666555666677654 444566666 6666663 2334555522 233455565 4654433 33455553
No 23
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.65 E-value=0.14 Score=41.94 Aligned_cols=41 Identities=29% Similarity=0.528 Sum_probs=23.1
Q ss_pred CcccccCchhHHHHHhh-cCCceeeCCCCCCCCcccc-chhhhhc
Q 009502 175 CNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSA-GHLEKHD 217 (533)
Q Consensus 175 C~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~~-~dLq~H~ 217 (533)
|+..+.....|..|+.. -..++..|+ .|...|.. ..|..|+
T Consensus 15 C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~ 57 (110)
T 2csh_A 15 CGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHM 57 (110)
T ss_dssp TSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHH
T ss_pred CCCccCCHHHHHHHHHHcCCCcCccCC--CCCcccCCHHHHHHHH
Confidence 67777555667777654 444556666 56655532 3344454
No 24
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.05 E-value=0.093 Score=41.65 Aligned_cols=33 Identities=33% Similarity=0.630 Sum_probs=14.6
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
.|+..+.+...|..|+.. -..++..|+ .|+..+
T Consensus 12 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f 45 (95)
T 2yt9_A 12 ICGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRF 45 (95)
T ss_dssp SSCCEESSSHHHHHHHHHSCSSCSEECS--SSCCEE
T ss_pred CCCCccCChHHHHHHHHhcCCCCCCcCC--CCCCcc
Confidence 455555444445555443 233344444 444443
No 25
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=90.85 E-value=0.16 Score=39.67 Aligned_cols=36 Identities=25% Similarity=0.533 Sum_probs=19.5
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
++|+..+.....|..|+.. -...+..|+.+.|+..+
T Consensus 11 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f 47 (89)
T 2wbs_A 11 AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKF 47 (89)
T ss_dssp TTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEE
T ss_pred CCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCcc
Confidence 4566666545566666653 44455566422455555
No 26
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=90.80 E-value=0.18 Score=40.16 Aligned_cols=41 Identities=22% Similarity=0.415 Sum_probs=23.7
Q ss_pred eecccCCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 167 VDFKNEFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 167 V~C~N~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
..|.. +.|+..+.....|..|+.. -..++..|+.+.|+..+
T Consensus 16 ~~C~~-~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f 57 (100)
T 2ebt_A 16 HYCDY-PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57 (100)
T ss_dssp EECCS-SSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEE
T ss_pred eEcCC-CCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCcc
Confidence 44543 4677777555667777654 55556666522466555
No 27
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.49 E-value=0.18 Score=41.60 Aligned_cols=17 Identities=29% Similarity=0.579 Sum_probs=8.8
Q ss_pred CCcccccCchhHHHHHh
Q 009502 174 HCNMKFNSEKELNEHML 190 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle 190 (533)
.|+..+.+...|..|+.
T Consensus 24 ~C~k~f~~~~~L~~H~~ 40 (115)
T 2dmi_A 24 DCSAAYDTLVELTVHMN 40 (115)
T ss_dssp SSSCEESSHHHHHHHHH
T ss_pred ccCchhcCHHHHHHHHH
Confidence 45555544455555544
No 28
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=90.27 E-value=0.11 Score=39.74 Aligned_cols=34 Identities=24% Similarity=0.491 Sum_probs=17.2
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
..|+..+.....|..|+.. -..++..|+ .|+..+
T Consensus 5 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f 39 (82)
T 2kmk_A 5 KICGKSFKRSSTLSTHLLIHSDTRPYPCQ--YCGKRF 39 (82)
T ss_dssp SSSCCEESSHHHHHHHHHHHHTCCCEECS--SSCCEE
T ss_pred CCCcccccCchhHHHHHHHcCCCCCeeCC--cCChhh
Confidence 3455555444555556543 334445555 455544
No 29
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.26 E-value=0.13 Score=42.57 Aligned_cols=87 Identities=14% Similarity=0.107 Sum_probs=58.0
Q ss_pred hhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc---CCCcc-eeccCCCCCcc---cccccccccccccccccc
Q 009502 183 KELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV---CPFKI-IPCEQKCPDTL---MRRDMDRHCITVCQMKLA 253 (533)
Q Consensus 183 keLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~---Cp~rp-V~Cpn~Cg~kI---~R~eLe~Hl~~eCPkr~V 253 (533)
..|..|+.. -..++..|+ .|+..|. ...|..|+.. -...+ ..|+ .|+... .+..|..|+...-..++.
T Consensus 5 ~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~-~C~~~f~f~~~~~l~~H~~~H~~~~~~ 81 (115)
T 2dmi_A 5 SSGKLYGSIFTGASKFRCK--DCSAAYDTLVELTVHMNETGHYRDDNHETDN-NNPKRWSKPRKRSLLEMEGKEDAQKVL 81 (115)
T ss_dssp CCCCCCCCCCCCCCSEEBS--SSSCEESSHHHHHHHHHHTCCCBCSCCCCCC-CCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred hhhhhheeeeCCCCCEECC--ccCchhcCHHHHHHHHHHhCccccCCCccCC-CCCcccccccHHHHHHHhhccCCCcce
Confidence 344455543 556788999 8999885 4557777642 11122 2386 788654 567889997666667788
Q ss_pred CCCCCcCCCCCCCc-hhHHHHHHh
Q 009502 254 NCPFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 254 ~CpF~~~GC~~kv~-R~eL~~He~ 276 (533)
.|++ |...+. +..|..|+.
T Consensus 82 ~C~~----C~k~f~~~~~L~~H~~ 101 (115)
T 2dmi_A 82 KCMY----CGHSFESLQDLSVHMI 101 (115)
T ss_dssp BCSS----SCCBCSSHHHHHHHHH
T ss_pred ECCC----CCCccCCHHHHHHHHH
Confidence 9998 886654 457788875
No 30
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=90.14 E-value=0.15 Score=39.85 Aligned_cols=42 Identities=29% Similarity=0.561 Sum_probs=22.8
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhc
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHD 217 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~ 217 (533)
.|+..+.+...|..|+.. -..++..|+ .|+..+. ...|..|.
T Consensus 11 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~ 54 (90)
T 1a1h_A 11 SCDRRFSQSGSLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHI 54 (90)
T ss_dssp SCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHhCCCCCccCC--CCCcccCCHHHHHHHH
Confidence 566666555566666643 444556666 5665553 22344443
No 31
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=90.10 E-value=0.22 Score=39.44 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=53.4
Q ss_pred ceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccccccccc--cccCCCCCcCCCCCCCc-h
Q 009502 195 ISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCITVCQM--KLANCPFYAVGCQSTIP-Q 268 (533)
Q Consensus 195 R~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPk--r~V~CpF~~~GC~~kv~-R 268 (533)
.+..|+ .|+..|. ...|..|+.. -...+..|+ .|+.... +..|..|+...-.. .+..|++ |...+. +
T Consensus 6 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~----C~~~f~~~ 78 (95)
T 2yt9_A 6 SGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCP-VCGLRFKRKDRMSYHVRSHDGSVGKPYICQS----CGKGFSRP 78 (95)
T ss_dssp SCEECS--SSCCEESSSHHHHHHHHHSCSSCSEECS-SSCCEESCHHHHHHHHHHHCCCCCSSBCCSS----SCCCBSSH
T ss_pred CCeECC--CCCCccCChHHHHHHHHhcCCCCCCcCC-CCCCccCCHHHHHHHHHHhcCCCCCceECCC----ccchhCCH
Confidence 567898 8999985 4557778743 345778998 7997655 56788996544443 6788998 886654 4
Q ss_pred hHHHHHHh
Q 009502 269 CMIQQHRH 276 (533)
Q Consensus 269 ~eL~~He~ 276 (533)
..|..|+.
T Consensus 79 ~~L~~H~~ 86 (95)
T 2yt9_A 79 DHLNGHIK 86 (95)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 56788864
No 32
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=89.28 E-value=0.2 Score=39.78 Aligned_cols=76 Identities=17% Similarity=0.310 Sum_probs=55.2
Q ss_pred CceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCC-chh
Q 009502 194 FISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTI-PQC 269 (533)
Q Consensus 194 yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R~ 269 (533)
.++..|+ .|+..|. ...|..|+.. -...+..|+ .|+.... ...|..|+...-...+..|++ |...+ .+.
T Consensus 6 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~ 78 (96)
T 2dmd_A 6 SGPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCK-TCDYAAADSSSLNKHLRIHSDERPFKCQI----CPYASRNSS 78 (96)
T ss_dssp CCCCCBT--TTTBCCCCHHHHHHHGGGCCCCCSEECS-SSCCEESSHHHHHHHHHHSCCCCCEECSS----SSCEESSHH
T ss_pred CcCeECC--CCCCccCCHHHHHHHHHhcCCCCCEeCC-CCCCccCCHHHHHHHHHHhCCCCCccCCC----CCCccCCHH
Confidence 3567898 8999885 4567888854 345788998 7997655 567889976655667788998 88655 445
Q ss_pred HHHHHHh
Q 009502 270 MIQQHRH 276 (533)
Q Consensus 270 eL~~He~ 276 (533)
.|..|+.
T Consensus 79 ~l~~H~~ 85 (96)
T 2dmd_A 79 QLTVHLR 85 (96)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 7888875
No 33
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=88.88 E-value=0.32 Score=39.33 Aligned_cols=75 Identities=17% Similarity=0.352 Sum_probs=53.7
Q ss_pred ceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCCc-hhH
Q 009502 195 ISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTIP-QCM 270 (533)
Q Consensus 195 R~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~-R~e 270 (533)
.+..|+ .|+..|. ...|..|+.. -...+..|+ .|+.... +..|..|+...-...+..|++ |...+. +..
T Consensus 16 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~~ 88 (106)
T 2ee8_A 16 KEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCD-ICHKAFRRQDHLRDHRYIHSKEKPFKCQE----CGKGFCQSRT 88 (106)
T ss_dssp CCCBCS--SSCCBCSSHHHHHHHHHHHCCSCCCBCS-SSCCBCSCHHHHHHHGGGSCCCCTTSCSS----SCCCCSSHHH
T ss_pred cCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCCC-CccchhCCHHHHHHHHHHhCCCCCeECCC----cCCcccCHHH
Confidence 456798 8999885 4456777632 345678998 7997655 567889976666667789998 886654 456
Q ss_pred HHHHHh
Q 009502 271 IQQHRH 276 (533)
Q Consensus 271 L~~He~ 276 (533)
|..|..
T Consensus 89 L~~H~~ 94 (106)
T 2ee8_A 89 LAVHKT 94 (106)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 788875
No 34
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=88.51 E-value=0.46 Score=42.64 Aligned_cols=106 Identities=20% Similarity=0.415 Sum_probs=71.9
Q ss_pred eecccCCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccC-CCCCccc-ccccc
Q 009502 167 VDFKNEFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQ-KCPDTLM-RRDMD 241 (533)
Q Consensus 167 V~C~N~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn-~Cg~kI~-R~eLe 241 (533)
..|. +..|+..+.+...|..|+.. -..++..|+.+.|+..+. ...|..|+.. -...+..|+. .|+.... +..|.
T Consensus 13 ~~C~-~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~ 91 (190)
T 1tf6_A 13 YICS-FADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMK 91 (190)
T ss_dssp CBCS-STTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHH
T ss_pred eeCC-CCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHH
Confidence 4454 25899999767789999865 677888993228999885 5567888854 4557889963 6997654 56788
Q ss_pred ccccccc--cccccCC--CCCcCCCCCCC-chhHHHHHHhh
Q 009502 242 RHCITVC--QMKLANC--PFYAVGCQSTI-PQCMIQQHRHD 277 (533)
Q Consensus 242 ~Hl~~eC--Pkr~V~C--pF~~~GC~~kv-~R~eL~~He~e 277 (533)
.|+...- ...+..| +. |...+ .+..|..|...
T Consensus 92 ~H~~~~h~~~~~~~~C~~~~----C~k~f~~~~~L~~H~~~ 128 (190)
T 1tf6_A 92 KHFNRFHNIKICVYVCHFEN----CGKAFKKHNQLKVHQFS 128 (190)
T ss_dssp HHHHTTSSTTTSCCEECSSS----SCEECSSHHHHHHHHGG
T ss_pred HHHHHhcCCCcceeeCCCCC----CccccCCHHHHHHHHHH
Confidence 8862322 2344567 54 87554 45678888753
No 35
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=88.44 E-value=0.25 Score=40.71 Aligned_cols=71 Identities=21% Similarity=0.361 Sum_probs=52.6
Q ss_pred CCCCcccccCchhHHHHHhh----cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccc
Q 009502 172 EFHCNMKFNSEKELNEHMLH----CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHC 244 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~----C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl 244 (533)
|..|+..+.+...|..|+.. -...+..|+ .|+..|. ...|..|+.. -...+..|+ .|+.... +..|..|+
T Consensus 38 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~ 114 (124)
T 2dlq_A 38 CPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRRRMELRLHMVSHTGEMPYKCS-SCSQQFMQKKDLQSHM 114 (124)
T ss_dssp CTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECS--SSCCEESSHHHHHHHHHHHSSSCSEECS-SSCCEESSHHHHHHHH
T ss_pred CCCCCchhcCHHHHHHHHhhhhcCCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCccCC-CccchhCCHHHHHHHH
Confidence 35799998777889999863 345778999 8999985 4457777733 456789998 7997655 46788885
Q ss_pred c
Q 009502 245 I 245 (533)
Q Consensus 245 ~ 245 (533)
.
T Consensus 115 ~ 115 (124)
T 2dlq_A 115 I 115 (124)
T ss_dssp H
T ss_pred H
Confidence 3
No 36
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=87.96 E-value=0.23 Score=42.90 Aligned_cols=104 Identities=20% Similarity=0.302 Sum_probs=68.0
Q ss_pred cccCCCCcccccCchhHHHHHh----hcCCceeeCCCCCC---CCccc-cchhhhhcCc-CCCcceeccC-CCCCccc-c
Q 009502 169 FKNEFHCNMKFNSEKELNEHML----HCGFISMICPNEGC---NAKFS-AGHLEKHDSV-CPFKIIPCEQ-KCPDTLM-R 237 (533)
Q Consensus 169 C~N~~GC~ekv~trkeLe~Hle----~C~yR~V~CpN~gC---~e~~~-~~dLq~H~~~-Cp~rpV~Cpn-~Cg~kI~-R 237 (533)
|+ |..|+..+.+...|..|+. .-..++..|+..+| ...+. ...|..|+.. -...+..|+. .|+.... +
T Consensus 4 ~~-C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~ 82 (155)
T 2gli_A 4 CR-WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRL 82 (155)
T ss_dssp CC-BTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSH
T ss_pred CC-cCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCH
Confidence 44 5789999977789999986 24456677763234 35553 4557777632 3456788972 5997655 5
Q ss_pred ccccccccccccccccCCCCCcCCCCCCC-chhHHHHHH
Q 009502 238 RDMDRHCITVCQMKLANCPFYAVGCQSTI-PQCMIQQHR 275 (533)
Q Consensus 238 ~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R~eL~~He 275 (533)
..|..|+...-...+..|++ -+|...+ .+..|..|.
T Consensus 83 ~~l~~H~~~h~~~~~~~C~~--~~C~~~f~~~~~L~~H~ 119 (155)
T 2gli_A 83 ENLKTHLRSHTGEKPYMCEH--EGCSKAFSNASDRAKHQ 119 (155)
T ss_dssp HHHHHHHHHTTTCCCEECCS--TTCCCEESSSSTTHHHH
T ss_pred HHHHHHHHHcCCCCCeeCCC--CCCCCccCCHHHHHHHH
Confidence 67889976555566778875 2577554 345677776
No 37
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=87.72 E-value=0.38 Score=41.69 Aligned_cols=101 Identities=25% Similarity=0.382 Sum_probs=67.4
Q ss_pred CCCCcccccCchhHHHHHhh--cCCce--------eeCCCCCCCCccc-cchhhhhcCc-CCCcceeccC-CCCCccc-c
Q 009502 172 EFHCNMKFNSEKELNEHMLH--CGFIS--------MICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQ-KCPDTLM-R 237 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~--C~yR~--------V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn-~Cg~kI~-R 237 (533)
|..|+..+.+...|..|+.. -.... ..|+ .|+..|. ...|..|+.. -...+..|+. .|+.... +
T Consensus 28 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~ 105 (155)
T 2rpc_A 28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP--REGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARS 105 (155)
T ss_dssp CCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCT--TSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCH
T ss_pred cccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCC--CcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCH
Confidence 46899999767889999863 22111 5788 8998885 4456677632 2346788972 3997755 5
Q ss_pred ccccccccccccccccCCCCCcCCCCCCCc-hhHHHHHHh
Q 009502 238 RDMDRHCITVCQMKLANCPFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 238 ~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~-R~eL~~He~ 276 (533)
..|..|+...-...+..|++ .+|...+. +..|..|+.
T Consensus 106 ~~L~~H~~~h~~~~~~~C~~--~~C~k~f~~~~~L~~H~~ 143 (155)
T 2rpc_A 106 ENLKIHKRTHTGEKPFKCEF--EGCDRRFANSSDRKKHMH 143 (155)
T ss_dssp HHHHHHHTTTCSSCSBCCSS--TTCCCCBSSHHHHHHSST
T ss_pred HHHHHHHHhhCCCCCccCCC--CCCCCccCCHHHHHHHHH
Confidence 67888976555566778875 24775554 456788865
No 38
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=87.54 E-value=0.18 Score=39.40 Aligned_cols=78 Identities=23% Similarity=0.431 Sum_probs=54.0
Q ss_pred ceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCCc-hhH
Q 009502 195 ISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTIP-QCM 270 (533)
Q Consensus 195 R~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~-R~e 270 (533)
++..|+.+.|+..|. ...|..|+.. -...+..|+ .|+.... ...|..|+...-...+..|++ |...+. +..
T Consensus 3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~~ 77 (90)
T 1a1h_A 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR-ICMRNFSRSDHLTTHIRTHTGEKPFACDI----CGRKFARSDE 77 (90)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECT-TTCCEESCHHHHHHHHHHHHCCCCEECTT----TCCEESSHHH
T ss_pred CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCC-CCCcccCCHHHHHHHHHHcCCCCCccCCC----CCchhCCHHH
Confidence 467787446999885 4456677632 345678998 7997655 567889976555667788998 886554 457
Q ss_pred HHHHHhh
Q 009502 271 IQQHRHD 277 (533)
Q Consensus 271 L~~He~e 277 (533)
|..|+..
T Consensus 78 l~~H~~~ 84 (90)
T 1a1h_A 78 RKRHTKI 84 (90)
T ss_dssp HHHHHGG
T ss_pred HHHHHHH
Confidence 8888753
No 39
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=87.45 E-value=0.15 Score=44.89 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=53.6
Q ss_pred CCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccccc
Q 009502 172 EFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCIT 246 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~ 246 (533)
|..|+..+.....|..|+.. -..++..|+ .|+..|. ...|..|+.. -...+..|+ .|+.... +..|..|+..
T Consensus 25 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~-~C~k~F~~~~~L~~H~~~ 100 (133)
T 2lt7_A 25 CIVCKRSYVCLTSLRRHFNIHSWEKKYPCR--YCEKVFPLAEYRTKHEIHHTGERRYQCL-ACGKSFINYQFMSSHIKS 100 (133)
T ss_dssp ETTTCCEESCHHHHHHHHHHHHCCSCEECS--SSSCEESSHHHHHHHHHHHHTCCCEEES-SSCCEESSHHHHHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCCCCeeCC--ccCeecccccchhhhccccCCCccccCC-CCCCCcCCHHHHHHHhHH
Confidence 35799999777889999865 566788999 8999986 4457777632 235678998 7997755 5678888643
No 40
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=87.23 E-value=0.17 Score=38.79 Aligned_cols=73 Identities=21% Similarity=0.468 Sum_probs=51.5
Q ss_pred eeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCC-chhHHH
Q 009502 197 MICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTI-PQCMIQ 272 (533)
Q Consensus 197 V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R~eL~ 272 (533)
..|+ .|+..+. ...|..|+.. -...+..|+ .|+.... +..|..|+...-...+..|++ |...+ .+..|.
T Consensus 2 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~~l~ 74 (82)
T 2kmk_A 2 FDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQ-YCGKRFHQKSDMKKHTFIHTGEKPHKCQV----CGKAFSQSSNLI 74 (82)
T ss_dssp EECS--SSCCEESSHHHHHHHHHHHHTCCCEECS-SSCCEESSHHHHHHHHHHHHTCCCEECTT----TSCEESSHHHHH
T ss_pred ccCC--CCcccccCchhHHHHHHHcCCCCCeeCC-cCChhhCCHHHHHHHHHHhcCCCCCcCCC----cchhhCChHHHH
Confidence 5688 8998885 4456666632 345678998 7997654 567889976666667788998 88655 445678
Q ss_pred HHHh
Q 009502 273 QHRH 276 (533)
Q Consensus 273 ~He~ 276 (533)
.|..
T Consensus 75 ~H~~ 78 (82)
T 2kmk_A 75 THSR 78 (82)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8865
No 41
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=87.22 E-value=0.17 Score=41.46 Aligned_cols=69 Identities=29% Similarity=0.517 Sum_probs=45.3
Q ss_pred CCCCcccccCchhHHHHHhhcCCceeeCCCCCCCCccc-cchhhhhcCcCCCcceeccCCCCCccc-cccccccc
Q 009502 172 EFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFS-AGHLEKHDSVCPFKIIPCEQKCPDTLM-RRDMDRHC 244 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~C~yR~V~CpN~gC~e~~~-~~dLq~H~~~Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl 244 (533)
|..|+..+.....|..|+..- .++..|+ .|+..|. ...|..|+..-...+..|+ .|+.... +..|..|+
T Consensus 19 C~~C~~~f~~~~~l~~H~~~H-~~~~~C~--~C~~~f~~~~~l~~H~~H~~~~~~~C~-~C~~~f~~~~~L~~H~ 89 (107)
T 1wjp_A 19 CRLCNAKLSSLLEQGSHERLC-RNAAVCP--YCSLRFFSPELKQEHESKCEYKKLTCL-ECMRTFKSSFSIWRHQ 89 (107)
T ss_dssp CTTTCCBCSSHHHHHHHHHHH-HHSBCCT--TTCCCBSSHHHHHHHHHHCSTGGGEEG-GGTEECSSHHHHHHHH
T ss_pred CCCCCCccCCHHHHHHHHHHC-CCCccCC--CCCCccCCHHHHHHHHHcCCCCCccCc-cccchhCCHHHHHHHH
Confidence 356888886566788887542 2567787 7887774 3446667644556677887 6876544 45677775
No 42
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=86.76 E-value=0.18 Score=45.37 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=26.5
Q ss_pred chhhhcccCCceeecccCCCCcccccCchhHHH-HHhhcC
Q 009502 155 RREAIAHILLKNVDFKNEFHCNMKFNSEKELNE-HMLHCG 193 (533)
Q Consensus 155 rREIlal~LLkeV~C~N~~GC~ekv~trkeLe~-Hle~C~ 193 (533)
+|+|.++. |+|+| .||.|.+ ++.+|+. |+.+|.
T Consensus 97 ~~~i~~L~----v~Cpn-~GC~~~~-~l~~l~~~H~~~~~ 130 (141)
T 3knv_A 97 RREVESLP----AVCPS-DGCTWKG-TLKEYESCHEGRCP 130 (141)
T ss_dssp HHHHHTSE----EECCS-TTCCCEE-EHHHHHHHTTTCCH
T ss_pred HHHHcccc----cccCC-CCCCCEe-EHHHHHHHHHHHhH
Confidence 56677777 89988 7999999 6888887 887665
No 43
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=86.70 E-value=0.19 Score=42.84 Aligned_cols=70 Identities=14% Similarity=0.291 Sum_probs=41.5
Q ss_pred CCCccccchhhhhcCcCCCcceeccCCCCCcccccccccc---ccccccccccCCCCCcCCCCCCCchhHHHHHHhhch
Q 009502 204 CNAKFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRH---CITVCQMKLANCPFYAVGCQSTIPQCMIQQHRHDDL 279 (533)
Q Consensus 204 C~e~~~~~dLq~H~~~Cp~rpV~Cpn~Cg~kI~R~eLe~H---l~~eCPkr~V~CpF~~~GC~~kv~R~eL~~He~ecl 279 (533)
|+..|...-+..+... ....|| .|...+...++... +...-....+.||+. ||.+.+++..+..|+.+|.
T Consensus 41 CgH~fC~~Ci~~~~~~---~~~~CP-~Cr~~~~~~~~~~~~~~l~~~i~~l~v~C~~~--gC~~~~~~~~~~~H~~~C~ 113 (116)
T 1rmd_A 41 CKHLFCRICILRCLKV---MGSYCP-SCRYPCFPTDLESPVKSFLNILNSLMVKCPAQ--DCNEEVSLEKYNHHVSSHK 113 (116)
T ss_dssp TSCEEEHHHHHHHHHH---TCSBCT-TTCCBCCGGGCBCCCHHHHHHHHHCEEECCST--TCCCEEEHHHHHHHHHTSC
T ss_pred CCCcccHHHHHHHHhH---CcCcCC-CCCCCCCHhhccccHHHHHHHHHHhcCCCCCC--CCcchhhHhHHHHHHHHhh
Confidence 5555554444444321 023566 57666554443321 122234456788885 9999999999999998764
No 44
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=86.41 E-value=0.54 Score=37.37 Aligned_cols=79 Identities=19% Similarity=0.347 Sum_probs=55.3
Q ss_pred CceeeCCCCCCCCccc-cchhhhhcCc-CCCcceecc-CCCCCccc-cccccccccccccccccCCCCCcCCCCCCC-ch
Q 009502 194 FISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCE-QKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTI-PQ 268 (533)
Q Consensus 194 yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cp-n~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R 268 (533)
.++..|+.+.|+..|. ...|..|... -...+..|+ ..|+.... ...|..|+...-...+..|++ |...+ .+
T Consensus 13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~ 88 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV----CNRSFSRS 88 (100)
T ss_dssp CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS----SCCBCSSH
T ss_pred CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC----CcCccCCH
Confidence 3567788556999885 4556777632 455778997 36997654 467888976666667788998 88655 44
Q ss_pred hHHHHHHh
Q 009502 269 CMIQQHRH 276 (533)
Q Consensus 269 ~eL~~He~ 276 (533)
..|..|+.
T Consensus 89 ~~l~~H~~ 96 (100)
T 2ebt_A 89 DHLALHMK 96 (100)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67788875
No 45
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=86.29 E-value=0.18 Score=43.36 Aligned_cols=27 Identities=33% Similarity=0.591 Sum_probs=15.3
Q ss_pred eecccCCCCcccccCchhHHHHHhhcCCc
Q 009502 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFI 195 (533)
Q Consensus 167 V~C~N~~GC~ekv~trkeLe~Hle~C~yR 195 (533)
|.|+| .||.|.+ ++.+|..|+..|.+.
T Consensus 83 v~C~n-~gC~~~~-~~~~l~~H~~~c~~~ 109 (118)
T 3hct_A 83 VKCPN-EGCLHKM-ELRHLEDHQAHCEFA 109 (118)
T ss_dssp EECSS-TTCCCEE-EGGGSGGGTSSSCC-
T ss_pred eECCC-CCCCCEE-eeHHHHHHHHHchhh
Confidence 56665 5666666 466666666555543
No 46
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=86.24 E-value=0.36 Score=41.44 Aligned_cols=28 Identities=46% Similarity=0.983 Sum_probs=13.8
Q ss_pred ceeeCCCCCCCCccccchhhhhcCcCCC
Q 009502 195 ISMICPNEGCNAKFSAGHLEKHDSVCPF 222 (533)
Q Consensus 195 R~V~CpN~gC~e~~~~~dLq~H~~~Cp~ 222 (533)
..|.|+|.||.+.+.+.+|+.|+..|.+
T Consensus 81 l~v~C~n~gC~~~~~~~~l~~H~~~c~~ 108 (118)
T 3hct_A 81 LMVKCPNEGCLHKMELRHLEDHQAHCEF 108 (118)
T ss_dssp SEEECSSTTCCCEEEGGGSGGGTSSSCC
T ss_pred ceeECCCCCCCCEEeeHHHHHHHHHchh
Confidence 3444544455555555555555544433
No 47
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=85.25 E-value=0.64 Score=35.46 Aligned_cols=64 Identities=25% Similarity=0.409 Sum_probs=35.3
Q ss_pred eecccCCCCcccccCchhHHHHHh--hcCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCC
Q 009502 167 VDFKNEFHCNMKFNSEKELNEHML--HCGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCP 232 (533)
Q Consensus 167 V~C~N~~GC~ekv~trkeLe~Hle--~C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg 232 (533)
..|.. +.|+..+.+...|..|+. +=..++..|+.++|+..+. ...|..|+.. -...+..|+ .|+
T Consensus 8 ~~C~~-~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~-~C~ 75 (79)
T 2dlk_A 8 MPCDF-PGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE-FSG 75 (79)
T ss_dssp EECSS-TTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC-SSS
T ss_pred ccCCC-CCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC-CCC
Confidence 44542 567777755567777865 2455667776334777664 3334555421 223445554 454
No 48
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=84.93 E-value=0.048 Score=43.28 Aligned_cols=33 Identities=27% Similarity=0.551 Sum_probs=15.5
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
.|+..+.....|..|+.. -..++..|+ .|+..+
T Consensus 8 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~k~f 41 (88)
T 1llm_C 8 ICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKF 41 (88)
T ss_dssp TTCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEE
T ss_pred CCCCccCCHHHHHHHHHHcCCCCCccCC--CCCCcc
Confidence 455555334445555433 334444554 455444
No 49
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=84.13 E-value=0.48 Score=38.65 Aligned_cols=77 Identities=16% Similarity=0.328 Sum_probs=54.5
Q ss_pred CceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCCc-hh
Q 009502 194 FISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTIP-QC 269 (533)
Q Consensus 194 yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~-R~ 269 (533)
.++..| . |+..|. ...|..|+.. -...+..|+ .|+.... +..|..|+...-...+..|++ |...+. +.
T Consensus 8 ~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~ 79 (110)
T 2csh_A 8 DKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCG-VCGKKFKMKHHLVGHMKIHTGIKPYECNI----CAKRFMWRD 79 (110)
T ss_dssp CCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECT-TTSCEESSSHHHHHHHTTTCCCCCEECSS----SCCEESCHH
T ss_pred CCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCC-CCCcccCCHHHHHHHHHHcCCCCCeeCCC----CcchhcCHH
Confidence 456778 3 988885 4457777743 345778998 7997655 567889976656667788998 886654 56
Q ss_pred HHHHHHhhc
Q 009502 270 MIQQHRHDD 278 (533)
Q Consensus 270 eL~~He~ec 278 (533)
.|..|+..+
T Consensus 80 ~l~~H~~~~ 88 (110)
T 2csh_A 80 SFHRHVTSC 88 (110)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 788888653
No 50
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=83.99 E-value=0.88 Score=39.31 Aligned_cols=84 Identities=21% Similarity=0.312 Sum_probs=58.1
Q ss_pred CCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccC-CCCCccc-cccccccccc
Q 009502 172 EFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQ-KCPDTLM-RRDMDRHCIT 246 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn-~Cg~kI~-R~eLe~Hl~~ 246 (533)
|..|+..+.+...|..|+.. -..++..|+.+.|+..|. ...|..|+.. -...+..|+. .|+.... +..|..|+..
T Consensus 65 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~ 144 (155)
T 2rpc_A 65 CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144 (155)
T ss_dssp CTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT
T ss_pred CCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH
Confidence 56899998667789999765 566789998335999985 4567788753 4456789973 4997655 5678899654
Q ss_pred cccccccCC
Q 009502 247 VCQMKLANC 255 (533)
Q Consensus 247 eCPkr~V~C 255 (533)
.-..++..|
T Consensus 145 H~~~k~~~c 153 (155)
T 2rpc_A 145 HTSDKSGPS 153 (155)
T ss_dssp TTSCCCSCS
T ss_pred hcCCCCCCC
Confidence 333333333
No 51
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=83.70 E-value=0.68 Score=35.93 Aligned_cols=78 Identities=18% Similarity=0.383 Sum_probs=55.3
Q ss_pred ceeeCCCCCCCCccc-cchhhhhcCc-CCCcceecc-CCCCCccc-cccccccccccccccccCCCCCcCCCCCCC-chh
Q 009502 195 ISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCE-QKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTI-PQC 269 (533)
Q Consensus 195 R~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cp-n~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R~ 269 (533)
....|+.++|+..+. ...|..|... -...+..|+ ..|+.... +..|..|+...-...+..|+. |...+ .+.
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~ 79 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK----CDRAFSRSD 79 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS----SSCEESSHH
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC----CCcccCCHH
Confidence 356788445999885 5567788743 456788997 26997654 567888876555667788998 88654 446
Q ss_pred HHHHHHh
Q 009502 270 MIQQHRH 276 (533)
Q Consensus 270 eL~~He~ 276 (533)
.|..|+.
T Consensus 80 ~l~~H~~ 86 (89)
T 2wbs_A 80 HLALHMK 86 (89)
T ss_dssp HHHHHGG
T ss_pred HHHHHHH
Confidence 7888875
No 52
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=82.45 E-value=0.48 Score=38.79 Aligned_cols=74 Identities=24% Similarity=0.513 Sum_probs=54.0
Q ss_pred eecccCCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceec--cCCCCCccc-cccc
Q 009502 167 VDFKNEFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPC--EQKCPDTLM-RRDM 240 (533)
Q Consensus 167 V~C~N~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~C--pn~Cg~kI~-R~eL 240 (533)
..|.. ..|+..+.+...|..|+.. -..++..|+ .|+..|. ...|..|+.. -...+..| + .|+.... +..|
T Consensus 37 ~~C~~-~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~-~C~~~f~~~~~L 112 (119)
T 2jp9_A 37 YQCDF-KDCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRSDHLKTHTRTHTGEKPFSCRWP-SCQKKFARSDEL 112 (119)
T ss_dssp EECCS-TTCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHTCCCEECCST-TCCCEESSHHHH
T ss_pred ccCCC-CCCcCccCCHHHHHHHHHHcCCCCCccCC--ccCchhCCHHHHHHHHHHhcCCCCeeCCCC-CCccccCCHHHH
Confidence 55652 3799999777889999875 667889999 8999985 4456677632 34567889 5 7997755 4678
Q ss_pred cccc
Q 009502 241 DRHC 244 (533)
Q Consensus 241 e~Hl 244 (533)
..|+
T Consensus 113 ~~H~ 116 (119)
T 2jp9_A 113 VRHH 116 (119)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8884
No 53
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=81.27 E-value=0.88 Score=37.22 Aligned_cols=46 Identities=24% Similarity=0.618 Sum_probs=25.4
Q ss_pred CCcccccCchhHHHHHhhcCCceeeCCCCCCCCccccchhhhhcCcCCCc
Q 009502 174 HCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSAGHLEKHDSVCPFK 223 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~C~yR~V~CpN~gC~e~~~~~dLq~H~~~Cp~r 223 (533)
.|..+....-+-+-|..+|.|.. || +|..+++-.-|-.|...||.+
T Consensus 10 kCEq~~vn~~DqelHdlnCs~Ni--CP--YC~nRls~eGl~RHV~~CPKR 55 (77)
T 2l7x_A 10 ICETTPVNAIDAEMHDLNCSYNI--CP--YCASRLTSDGLARHVTQCPKR 55 (77)
T ss_dssp TTCCCCSSHHHHHHHHHHHTTTC--CT--TTCCCCCTTTHHHHHTTCSHH
T ss_pred eeccccccHHHHHHHHcCCCccc--Ch--hhhccCCccchhhhcccCccH
Confidence 34443323334445656677653 66 666666666666666666543
No 54
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=81.11 E-value=0.69 Score=39.30 Aligned_cols=27 Identities=22% Similarity=0.222 Sum_probs=21.4
Q ss_pred eecccCCCCcccccCchhHHHHHhhcCCc
Q 009502 167 VDFKNEFHCNMKFNSEKELNEHMLHCGFI 195 (533)
Q Consensus 167 V~C~N~~GC~ekv~trkeLe~Hle~C~yR 195 (533)
|.|+| .||.|.+ ++.++..|+..|.+.
T Consensus 89 v~C~~-~gC~~~~-~~~~~~~H~~~C~~~ 115 (116)
T 1rmd_A 89 VKCPA-QDCNEEV-SLEKYNHHVSSHKES 115 (116)
T ss_dssp EECCS-TTCCCEE-EHHHHHHHHHTSCCC
T ss_pred CCCCC-CCCcchh-hHhHHHHHHHHhhcc
Confidence 78887 5888888 688888888878763
No 55
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=81.04 E-value=0.88 Score=37.66 Aligned_cols=74 Identities=23% Similarity=0.448 Sum_probs=52.7
Q ss_pred CCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceecc-CCCCCccc-ccccccccc
Q 009502 172 EFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCE-QKCPDTLM-RRDMDRHCI 245 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cp-n~Cg~kI~-R~eLe~Hl~ 245 (533)
|..|+..+.+...|..|+.. -..++..|+.+.|+..+. ...|..|... -...+..|+ ..|+.... +..|..|+.
T Consensus 37 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~ 115 (124)
T 1ubd_C 37 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115 (124)
T ss_dssp CTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred CCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHH
Confidence 35799999777889999876 667889998335999885 3456666632 345677897 26996654 567888853
No 56
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=80.34 E-value=0.57 Score=35.86 Aligned_cols=45 Identities=29% Similarity=0.724 Sum_probs=26.2
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHD 217 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~ 217 (533)
..|+..+.+...|..|+.. -..++..|+.++|+..+. ...|..|+
T Consensus 7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~ 53 (85)
T 2j7j_A 7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE 53 (85)
T ss_dssp TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHH
Confidence 4677777555667777654 455666776224776663 33344454
No 57
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=79.60 E-value=0.58 Score=42.00 Aligned_cols=30 Identities=30% Similarity=0.762 Sum_probs=24.6
Q ss_pred CceeeCCCCCCCCccccchhhh-hcCcCCCc
Q 009502 194 FISMICPNEGCNAKFSAGHLEK-HDSVCPFK 223 (533)
Q Consensus 194 yR~V~CpN~gC~e~~~~~dLq~-H~~~Cp~r 223 (533)
...|.|+|.||.|.+.+.+++. |+..|+..
T Consensus 102 ~L~v~Cpn~GC~~~~~l~~l~~~H~~~~~~~ 132 (141)
T 3knv_A 102 SLPAVCPSDGCTWKGTLKEYESCHEGRCPLM 132 (141)
T ss_dssp TSEEECCSTTCCCEEEHHHHHHHTTTCCHHH
T ss_pred ccccccCCCCCCCEeEHHHHHHHHHHHhHHH
Confidence 4578888889999999999998 98777544
No 58
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=78.58 E-value=1.1 Score=37.33 Aligned_cols=41 Identities=17% Similarity=0.460 Sum_probs=19.3
Q ss_pred CCCcccccCchhHHHHHhhcCC-ceeeCCCCCCCCccccchhhhh
Q 009502 173 FHCNMKFNSEKELNEHMLHCGF-ISMICPNEGCNAKFSAGHLEKH 216 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~C~y-R~V~CpN~gC~e~~~~~dLq~H 216 (533)
..|+..+ ....++.|+..|.. ..+.|. .|...|....++.|
T Consensus 14 ~~Cgd~l-KK~kv~~H~~~Cr~~~~~SCI--DC~~~F~~~~y~~H 55 (79)
T 1wjv_A 14 NACGESV-KKIQVEKHVSNCRNCECLSCI--DCGKDFWGDDYKSH 55 (79)
T ss_dssp SSSCCEE-ETTHHHHHHHHCTTCCEEEET--TTTEEEEGGGTTTC
T ss_pred CCCCCee-ecccchhHHhhCCCCCcEEec--ccCCeeCCCCEeCE
Confidence 3455555 34445555444443 244454 45555444444444
No 59
>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}
Probab=77.26 E-value=1.9 Score=33.62 Aligned_cols=47 Identities=28% Similarity=0.460 Sum_probs=33.2
Q ss_pred CCCCcccccCchhHHHHHhhcCCceeeCCCCCCCCccc--cchhhhhcCcCCC
Q 009502 172 EFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFS--AGHLEKHDSVCPF 222 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~C~yR~V~CpN~gC~e~~~--~~dLq~H~~~Cp~ 222 (533)
|..|.....+.++|+.|...|+. -.|| +|-.... -.-||.|..+|+.
T Consensus 6 C~~C~~ECET~kEl~~H~~sCp~--gqCP--YC~~~~e~tesAlQaHfkvCkl 54 (57)
T 2k9h_A 6 CDVCHHECETAKELESHRQSCIN--GQCP--YCMTITEATESALQAHYSICKL 54 (57)
T ss_dssp CTTTCCBCSSTTTHHHHHHHHTT--TBCT--TTCCBCCSSHHHHHHHHTTCCG
T ss_pred hhHHHhhhhhHHHHHHHhccCCC--CCCC--cccCcCCcCHHHHHHHHHHhcc
Confidence 35677777677899999888875 4577 6766553 3447888888863
No 60
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=75.48 E-value=2.9 Score=31.38 Aligned_cols=51 Identities=20% Similarity=0.413 Sum_probs=34.2
Q ss_pred eeecccCCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcccc-chhhhhc
Q 009502 166 NVDFKNEFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSA-GHLEKHD 217 (533)
Q Consensus 166 eV~C~N~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~~-~dLq~H~ 217 (533)
...|.. .+|+..+.....|..|+.. ...++..|+.+.|+..|.. ..|..|+
T Consensus 17 ~~~C~~-~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~ 69 (72)
T 2epa_A 17 SHICSH-PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69 (72)
T ss_dssp CEECSS-TTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred ceeCCC-CCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence 356664 5688888656778888765 6777888863358887753 4456665
No 61
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.90 E-value=1.8 Score=33.13 Aligned_cols=34 Identities=24% Similarity=0.505 Sum_probs=17.4
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
..|+..+.....|..|+.. -..++..|+ .|+..|
T Consensus 22 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f 56 (77)
T 2cot_A 22 DECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAF 56 (77)
T ss_dssp SSSCCBCSCHHHHHHHHTTTCCSCSEECS--SSCCEE
T ss_pred CCCCcccCCHHHHHHHHHHcCCCcCeeCC--CCCCcc
Confidence 3455555444555556543 334455555 455554
No 62
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.36 E-value=1.3 Score=33.74 Aligned_cols=62 Identities=23% Similarity=0.442 Sum_probs=43.0
Q ss_pred ceeeCCCCCCCCccc-cchhhhhcC--cCCCcceeccCC--CCCccc-cccccccccccccccccCCCC
Q 009502 195 ISMICPNEGCNAKFS-AGHLEKHDS--VCPFKIIPCEQK--CPDTLM-RRDMDRHCITVCQMKLANCPF 257 (533)
Q Consensus 195 R~V~CpN~gC~e~~~-~~dLq~H~~--~Cp~rpV~Cpn~--Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF 257 (533)
++..|+.+.|+..+. ...|..|+. .=...+..|+ . |+.... +..|..|+...-..++..|++
T Consensus 6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~-~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 73 (79)
T 2dlk_A 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP-EPACGKSFNFKKHLKEHMKLHSDTRDYICEF 73 (79)
T ss_dssp SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECS-CTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECC-CCCCcCccCCHHHHHHHHHHhCCCCCeeCCC
Confidence 456777556999885 455777764 2346778897 5 997655 567888876555667778887
No 63
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=74.35 E-value=0.51 Score=38.59 Aligned_cols=46 Identities=30% Similarity=0.639 Sum_probs=34.2
Q ss_pred CCCC-ccccchhhhhcCcCCCcceeccCCCCCccccccccccccccccccc
Q 009502 203 GCNA-KFSAGHLEKHDSVCPFKIIPCEQKCPDTLMRRDMDRHCITVCQMKL 252 (533)
Q Consensus 203 gC~e-~~~~~dLq~H~~~Cp~rpV~Cpn~Cg~kI~R~eLe~Hl~~eCPkr~ 252 (533)
.|.. .+...+.+-|...|.|.+ || +|...++-.-|.+| ...||++.
T Consensus 10 kCEq~~vn~~DqelHdlnCs~Ni--CP-YC~nRls~eGl~RH-V~~CPKR~ 56 (77)
T 2l7x_A 10 ICETTPVNAIDAEMHDLNCSYNI--CP-YCASRLTSDGLARH-VTQCPKRK 56 (77)
T ss_dssp TTCCCCSSHHHHHHHHHHHTTTC--CT-TTCCCCCTTTHHHH-HTTCSHHH
T ss_pred eeccccccHHHHHHHHcCCCccc--Ch-hhhccCCccchhhh-cccCccHH
Confidence 4443 344556667888888874 78 89988999999999 68899864
No 64
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=74.03 E-value=1.7 Score=36.20 Aligned_cols=49 Identities=24% Similarity=0.558 Sum_probs=44.8
Q ss_pred cCCceeeCCCCCCCCccccchhhhhcCcCCC-cceeccCCCCCcccccccccc
Q 009502 192 CGFISMICPNEGCNAKFSAGHLEKHDSVCPF-KIIPCEQKCPDTLMRRDMDRH 243 (533)
Q Consensus 192 C~yR~V~CpN~gC~e~~~~~dLq~H~~~Cp~-rpV~Cpn~Cg~kI~R~eLe~H 243 (533)
|+.-...|. .|+..+....++.|...|.. ..+.|- .|+..+...++..|
T Consensus 6 ~~MV~F~C~--~Cgd~lKK~kv~~H~~~Cr~~~~~SCI-DC~~~F~~~~y~~H 55 (79)
T 1wjv_A 6 SGMVFFTCN--ACGESVKKIQVEKHVSNCRNCECLSCI-DCGKDFWGDDYKSH 55 (79)
T ss_dssp CCCCEEEES--SSCCEEETTHHHHHHHHCTTCCEEEET-TTTEEEEGGGTTTC
T ss_pred CceeEEEcC--CCCCeeecccchhHHhhCCCCCcEEec-ccCCeeCCCCEeCE
Confidence 777788898 89999999999999999987 589997 89999999999999
No 65
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=71.13 E-value=3.8 Score=31.15 Aligned_cols=55 Identities=22% Similarity=0.370 Sum_probs=38.5
Q ss_pred CceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-ccccccccccccccc
Q 009502 194 FISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCITVCQMK 251 (533)
Q Consensus 194 yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr 251 (533)
.++..|+ .|+..|. ...|..|+.. -...+..|+ .|+.... +..|..|+...-..+
T Consensus 16 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~H~~~~ 73 (77)
T 2cot_A 16 RRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCD-ECGKAFIQRSHLIGHHRVHTGSG 73 (77)
T ss_dssp SCSSBCS--SSCCBCSCHHHHHHHHTTTCCSCSEECS-SSCCEESSHHHHHHHGGGSCCCC
T ss_pred CCCEECC--CCCcccCCHHHHHHHHHHcCCCcCeeCC-CCCCccCCHHHHHHHHHHhCCCC
Confidence 3567898 8999885 5567888743 456789998 7997655 567888865433333
No 66
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=70.93 E-value=3.1 Score=29.52 Aligned_cols=43 Identities=26% Similarity=0.505 Sum_probs=23.7
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHD 217 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~ 217 (533)
..|+..+.....|..|+.. -..++..|+ .|+..|. ...|..|+
T Consensus 5 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~ 49 (57)
T 1bbo_A 5 EECGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHM 49 (57)
T ss_dssp TTTCCBCSSHHHHHHHHHHTSSCCCEECS--SSSCEESSHHHHHHHH
T ss_pred CCCcCcCCCHHHHHHHHHhcCCCCCccCC--CCCchhcCHHHHHHHH
Confidence 4566666445566666654 445556666 5666653 23344443
No 67
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=70.56 E-value=1.1 Score=39.35 Aligned_cols=77 Identities=19% Similarity=0.356 Sum_probs=53.6
Q ss_pred CCceeeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCC-ch
Q 009502 193 GFISMICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTI-PQ 268 (533)
Q Consensus 193 ~yR~V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R 268 (533)
..++..|+ .|+..|. ...|..|+.. -...+..|+ .|+.... +..|..|+..--..++..|+. |...+ .+
T Consensus 19 Gek~y~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~-~C~k~F~~~~~L~~H~~~H~~~k~~~C~~----C~k~F~~~ 91 (133)
T 2lt7_A 19 GRVYYICI--VCKRSYVCLTSLRRHFNIHSWEKKYPCR-YCEKVFPLAEYRTKHEIHHTGERRYQCLA----CGKSFINY 91 (133)
T ss_dssp TEEEEEET--TTCCEESCHHHHHHHHHHHHCCSCEECS-SSSCEESSHHHHHHHHHHHHTCCCEEESS----SCCEESSH
T ss_pred CCcCeECC--CCCCCcCCHHHHHHHHHHcCCCCCeeCC-ccCeecccccchhhhccccCCCccccCCC----CCCCcCCH
Confidence 34677898 8999985 4556777632 234678897 7997755 567889965444556788888 88654 44
Q ss_pred hHHHHHHh
Q 009502 269 CMIQQHRH 276 (533)
Q Consensus 269 ~eL~~He~ 276 (533)
..|..|+.
T Consensus 92 ~~L~~H~~ 99 (133)
T 2lt7_A 92 QFMSSHIK 99 (133)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhH
Confidence 56778875
No 68
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=70.30 E-value=0.69 Score=37.70 Aligned_cols=74 Identities=24% Similarity=0.399 Sum_probs=49.7
Q ss_pred CceeeCCCCCCCCccc-cchhhhhcCcCCCcceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCC-chhH
Q 009502 194 FISMICPNEGCNAKFS-AGHLEKHDSVCPFKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTI-PQCM 270 (533)
Q Consensus 194 yR~V~CpN~gC~e~~~-~~dLq~H~~~Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R~e 270 (533)
.++..|+ .|+..|. ...|..|+..- ..+..|+ .|+.... ...|..|+ .....++..|++ |...+ .+..
T Consensus 14 ~~~~~C~--~C~~~f~~~~~l~~H~~~H-~~~~~C~-~C~~~f~~~~~l~~H~-~H~~~~~~~C~~----C~~~f~~~~~ 84 (107)
T 1wjp_A 14 KEVYQCR--LCNAKLSSLLEQGSHERLC-RNAAVCP-YCSLRFFSPELKQEHE-SKCEYKKLTCLE----CMRTFKSSFS 84 (107)
T ss_dssp CCCCBCT--TTCCBCSSHHHHHHHHHHH-HHSBCCT-TTCCCBSSHHHHHHHH-HHCSTGGGEEGG----GTEECSSHHH
T ss_pred CcCeECC--CCCCccCCHHHHHHHHHHC-CCCccCC-CCCCccCCHHHHHHHH-HcCCCCCccCcc----ccchhCCHHH
Confidence 4567788 7998885 34566666332 3577887 7986654 45788886 355667788887 87654 3456
Q ss_pred HHHHHh
Q 009502 271 IQQHRH 276 (533)
Q Consensus 271 L~~He~ 276 (533)
|..|+.
T Consensus 85 L~~H~~ 90 (107)
T 1wjp_A 85 IWRHQV 90 (107)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777774
No 69
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=69.99 E-value=1.1 Score=36.97 Aligned_cols=48 Identities=29% Similarity=0.504 Sum_probs=26.3
Q ss_pred CCceeeCCCCCCCCcc--ccchhhhhcCcCCCcceeccCCCCCccc-ccccccc
Q 009502 193 GFISMICPNEGCNAKF--SAGHLEKHDSVCPFKIIPCEQKCPDTLM-RRDMDRH 243 (533)
Q Consensus 193 ~yR~V~CpN~gC~e~~--~~~dLq~H~~~Cp~rpV~Cpn~Cg~kI~-R~eLe~H 243 (533)
...+..|+ .|+..| ....|..|+......+..|+ .|+..+. +..|..|
T Consensus 31 ~~~~~~C~--~C~k~F~~~~~~L~~H~~~h~~k~~~C~-~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 31 DKGSVSCP--TCQAVGRKTIEGLKKHMENCKQEMFTCH-HCGKQLRSLAGMKYH 81 (96)
T ss_dssp HTSCEECT--TTCSCEESSHHHHHHHHHHHCCCCCCCS-SSCCCCSSHHHHHHH
T ss_pred CCCCcCCC--CCCCCcccCHHHHHHHHHHHCCCCeECC-CCCCeeCCHHHHHHH
Confidence 44556676 677766 34556666533344555665 5665443 3445555
No 70
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=69.42 E-value=1.1 Score=29.94 Aligned_cols=24 Identities=29% Similarity=0.750 Sum_probs=14.1
Q ss_pred ceeeCCCCCCCCccccchhhhhcCcC
Q 009502 195 ISMICPNEGCNAKFSAGHLEKHDSVC 220 (533)
Q Consensus 195 R~V~CpN~gC~e~~~~~dLq~H~~~C 220 (533)
..|.|| -|+..++..++..|+..|
T Consensus 5 f~vqcp--vcqq~mpaahin~hldrc 28 (29)
T 3vhs_A 5 FQVQCP--VCQQMMPAAHINSHLDRC 28 (29)
T ss_dssp CEEECT--TTCCEEEGGGHHHHHHHH
T ss_pred eeeeCh--HHHHhCcHHHHHHHHhcc
Confidence 445666 566666666666665444
No 71
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.96 E-value=3.6 Score=30.70 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=16.6
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
.|+..+.....|..|+.. -..++..|+ .|+..|
T Consensus 14 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f 47 (70)
T 1x5w_A 14 ECSYSCSSKAALRIHERIHCTDRPFKCN--YCSFDT 47 (70)
T ss_dssp SSSCEESSHHHHHHHHGGGCCSCSEECS--SSSCEE
T ss_pred CCCcccCCHHHHHHHHHHcCCCCCEeCC--CCCCcc
Confidence 455555444455555543 344445555 455554
No 72
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.49 E-value=4.5 Score=30.89 Aligned_cols=43 Identities=21% Similarity=0.581 Sum_probs=22.0
Q ss_pred CCCcccccCchhHHHHHhh-cCC----ceeeCCCCCCCCccc-cchhhhhc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGF----ISMICPNEGCNAKFS-AGHLEKHD 217 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~y----R~V~CpN~gC~e~~~-~~dLq~H~ 217 (533)
..|...+.....|..|+.. ... ++..|+ .|+..|. ...|..|+
T Consensus 19 ~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~ 67 (86)
T 1x6h_A 19 SHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFTRRNTMARHA 67 (86)
T ss_dssp SSSSCEESSHHHHHHHHHHTTCSSCCCCCEECS--SSCCEESCHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHhcCCcCCCcceECC--CCCChhCCHHHHHHHH
Confidence 3466666444556666542 222 455665 5666553 33344555
No 73
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=66.98 E-value=3.8 Score=30.84 Aligned_cols=34 Identities=26% Similarity=0.462 Sum_probs=18.2
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS 209 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~ 209 (533)
.|+..+.....|..|+.. -..++..|+ .|...|.
T Consensus 19 ~C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~ 53 (72)
T 1x6e_A 19 ECGKAFSRSSILVQHQRVHTGEKPYKCL--ECGKAFS 53 (72)
T ss_dssp SSCCEESSHHHHHHHHHGGGCSCCEECS--SSCCEES
T ss_pred CCCCccCCHHHHHHHHHhcCCCCCeECC--CCCcccC
Confidence 466666444556666543 444555565 5555553
No 74
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=65.20 E-value=6.4 Score=36.33 Aligned_cols=30 Identities=10% Similarity=0.142 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHH-HhCCceeecccccccc
Q 009502 319 DVRSLSFAIKDLEA-KLGPFKEDTVNRYSGE 348 (533)
Q Consensus 319 ~I~sL~~~VkdLE~-Ki~~le~WKI~~ysqk 348 (533)
.|..|..++..++. ...+.+.|+|++|+..
T Consensus 25 ~~~~~~~~~~~~~~~~~~g~~~w~I~nfS~~ 55 (192)
T 1ca9_A 25 AMADLEQKVLEMEASTYDGVFIWKISDFARK 55 (192)
T ss_dssp HHHHHHHHHHHHHHCCSSSEEEEEEESHHHH
T ss_pred HHHHHHHHHHHhcCCccCceEEEEECCHHHH
Confidence 57778888888887 4788999999999974
No 75
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=65.13 E-value=5.1 Score=37.27 Aligned_cols=31 Identities=10% Similarity=0.129 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHH-hCCceeeccccccccc
Q 009502 319 DVRSLSFAIKDLEAK-LGPFKEDTVNRYSGEG 349 (533)
Q Consensus 319 ~I~sL~~~VkdLE~K-i~~le~WKI~~ysqkg 349 (533)
.|..|..++..+|.. ..+.+.|+|++|++..
T Consensus 22 ~~~~~~~~~~~~~~~~~~g~~~w~I~~fS~~~ 53 (192)
T 2gkw_A 22 RLADMDLRFQVLETASYNGVLIWKIRDYKRRK 53 (192)
T ss_dssp HHHHHHHHHHHHHTCCCSSEEEEEEECHHHHH
T ss_pred HHHHHHHHHHHhhccccCcEEEEEECCHHHHH
Confidence 567778888888864 6888999999999764
No 76
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=64.69 E-value=4.7 Score=37.95 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHH-HHhCCceeeccccccccc
Q 009502 319 DVRSLSFAIKDLE-AKLGPFKEDTVNRYSGEG 349 (533)
Q Consensus 319 ~I~sL~~~VkdLE-~Ki~~le~WKI~~ysqkg 349 (533)
.|..|..++..++ ....+...|+|++|++..
T Consensus 22 ~~~~l~~~~~~~~~~~~~g~~~w~I~nfS~~~ 53 (198)
T 4ghu_A 22 RLADMDLRFQVLETASYNGVLIWKIRDYKRRK 53 (198)
T ss_dssp HHHHHHHHHHHHHTCCSSSEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHhcccccccEEEEEECCHHHHH
Confidence 6888888999988 455789999999999753
No 77
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=64.68 E-value=4.7 Score=30.40 Aligned_cols=44 Identities=25% Similarity=0.428 Sum_probs=28.4
Q ss_pred CCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcccc-chhhhhc
Q 009502 172 EFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSA-GHLEKHD 217 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~~-~dLq~H~ 217 (533)
|..|+..+.....|..|+.. -..++..|+ .|+..|.. ..|..|+
T Consensus 20 C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~ 65 (74)
T 2lce_A 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCN--ICGAQFNRPANLKTHT 65 (74)
T ss_dssp CTTSSCCBSCHHHHHHHHHHHCCCCSEECT--TTCCEESCHHHHHHHH
T ss_pred CCCCCceeCCHHHHHHHHHHcCCCCCEECC--CCCchhCCHHHHHHHH
Confidence 35677777555677778754 556677777 67777643 3455554
No 78
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=64.61 E-value=4.2 Score=28.75 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=18.3
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
..|+..+.....|..|+.. -..++..|+ .|+..+
T Consensus 8 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f 42 (57)
T 3uk3_C 8 SYCGKFFRSNYYLNIHLRTHTGEKPYKCE--FCEYAA 42 (57)
T ss_dssp TTTCCBCSCHHHHHHHHHHHHCCCCEECS--SSSCEE
T ss_pred CCCcchhCChHHHHHHHHHcCCCCCcCCC--CCcchh
Confidence 3466665444556666543 444555665 565555
No 79
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=64.49 E-value=4.9 Score=28.79 Aligned_cols=34 Identities=24% Similarity=0.400 Sum_probs=17.3
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
..|+..+.....|..|+.. -..++..|+ .|+..+
T Consensus 6 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f 40 (60)
T 2adr_A 6 EVCTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAF 40 (60)
T ss_dssp TTTCCCBSCHHHHHHHHHTTTSSCSEECT--TTCCEE
T ss_pred CCCccccCCHHHHHHHHHHhCCCCCccCC--CCCCcc
Confidence 3455555444555556543 344455555 455554
No 80
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.81 E-value=2 Score=32.91 Aligned_cols=62 Identities=23% Similarity=0.326 Sum_probs=38.2
Q ss_pred CCceeeCCCCCCCCcccc-chhhhhcC-cCCC----cceeccCCCCCccc-cccccccccccccccccCCCC
Q 009502 193 GFISMICPNEGCNAKFSA-GHLEKHDS-VCPF----KIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPF 257 (533)
Q Consensus 193 ~yR~V~CpN~gC~e~~~~-~dLq~H~~-~Cp~----rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF 257 (533)
..++..|+ .|...|.. ..|..|.. .... .+..|+ .|+.... +..|..|+...-...+..|+.
T Consensus 12 ~~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~~~~~~~~~~ 80 (86)
T 1x6h_A 12 GEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS-KCGKTFTRRNTMARHADNCAGPDGVEGEN 80 (86)
T ss_dssp CCCCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCCEECS-SSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred CCCCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcceECC-CCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence 34667888 78888753 45666752 2222 577887 7886654 467888854444445556654
No 81
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=63.69 E-value=4.2 Score=33.20 Aligned_cols=44 Identities=23% Similarity=0.301 Sum_probs=25.4
Q ss_pred CCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCccc-cchhhhhc
Q 009502 172 EFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFS-AGHLEKHD 217 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~-~~dLq~H~ 217 (533)
|+.|+..+.+...|..|+.. -..++..|+ .|+..|. ...|..|+
T Consensus 31 C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~ 76 (85)
T 2lv2_A 31 CPVCGESFASKGAQERHLRLLHAAQVFPCK--YCPATFYSSPGLTRHI 76 (85)
T ss_dssp CTTSCCEESSHHHHHHHHHTTSCSSSEECT--TSSCEESSHHHHHHHH
T ss_pred CCCCCCCcCcHHHHhhhhhhccCCCccCCC--CCCCEeCCHHHHHHhC
Confidence 34666666555566667643 555666666 6666663 33345553
No 82
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.14 E-value=3.5 Score=30.78 Aligned_cols=47 Identities=15% Similarity=0.369 Sum_probs=20.3
Q ss_pred ceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCCc-hhHHHHHH
Q 009502 224 IIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTIP-QCMIQQHR 275 (533)
Q Consensus 224 pV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~-R~eL~~He 275 (533)
+..|+ .|+.... +..|..|+......++..|++ |...+. +..|..|+
T Consensus 9 ~~~C~-~C~k~f~~~~~L~~H~~~H~~~~~~~C~~----C~~~f~~~~~L~~H~ 57 (70)
T 1x5w_A 9 PEKCS-ECSYSCSSKAALRIHERIHCTDRPFKCNY----CSFDTKQPSNLSKHM 57 (70)
T ss_dssp SEECS-SSSCEESSHHHHHHHHGGGCCSCSEECSS----SSCEESSHHHHHHHH
T ss_pred CeECC-CCCcccCCHHHHHHHHHHcCCCCCEeCCC----CCCccCCHHHHHHHH
Confidence 34454 4554332 234445543333344455555 554332 23444444
No 83
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.70 E-value=3.4 Score=31.13 Aligned_cols=49 Identities=16% Similarity=0.260 Sum_probs=27.3
Q ss_pred cceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCCc-hhHHHHHHh
Q 009502 223 KIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 223 rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~-R~eL~~He~ 276 (533)
.+..|+ .|+.... +..|..|+...-..++..|++ |...+. +..|..|+.
T Consensus 13 k~~~C~-~C~k~f~~~~~L~~H~~~h~~~~~~~C~~----C~~~f~~~~~L~~H~~ 63 (72)
T 1x6e_A 13 KPYGCV-ECGKAFSRSSILVQHQRVHTGEKPYKCLE----CGKAFSQNSGLINHQR 63 (72)
T ss_dssp CCEECS-SSCCEESSHHHHHHHHHGGGCSCCEECSS----SCCEESSHHHHHHHHH
T ss_pred CCccCC-CCCCccCCHHHHHHHHHhcCCCCCeECCC----CCcccCCHHHHHHHHH
Confidence 455665 5665543 345666654444455667776 665443 345666654
No 84
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=61.96 E-value=0.35 Score=38.19 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=13.8
Q ss_pred cccccccccccccccCCCCCcCCCCCCC-chhHHHHHHh
Q 009502 239 DMDRHCITVCQMKLANCPFYAVGCQSTI-PQCMIQQHRH 276 (533)
Q Consensus 239 eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R~eL~~He~ 276 (533)
.|..|+...-...+..|++ |...+ .+..|..|..
T Consensus 18 ~L~~H~~~H~~~~~~~C~~----C~k~f~~~~~L~~H~~ 52 (88)
T 1llm_C 18 HLTTHIRTHTGEKPFACDI----CGRKFARSDERKRHRD 52 (88)
T ss_dssp HHHHHHHHHHCCCCEECTT----TCCEESSHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCccCCC----CCCccCCHHHHHHHHH
Confidence 3444433333333444544 44332 2234455543
No 85
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=60.49 E-value=3.8 Score=29.42 Aligned_cols=35 Identities=29% Similarity=0.649 Sum_probs=14.9
Q ss_pred eeCCCCCCCCccc-cchhhhhcCc-CCCcceeccCCCCCc
Q 009502 197 MICPNEGCNAKFS-AGHLEKHDSV-CPFKIIPCEQKCPDT 234 (533)
Q Consensus 197 V~CpN~gC~e~~~-~~dLq~H~~~-Cp~rpV~Cpn~Cg~k 234 (533)
..|+ .|+..+. ...|..|... -...+..|+ .|+..
T Consensus 3 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~ 39 (60)
T 2adr_A 3 FVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCG-LCNRA 39 (60)
T ss_dssp BCCT--TTCCCBSCHHHHHHHHHTTTSSCSEECT-TTCCE
T ss_pred CcCC--CCccccCCHHHHHHHHHHhCCCCCccCC-CCCCc
Confidence 3455 4555553 2334444421 223344454 34433
No 86
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=60.11 E-value=5.6 Score=30.31 Aligned_cols=33 Identities=24% Similarity=0.617 Sum_probs=16.4
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcc
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKF 208 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~ 208 (533)
.|+..+.....|..|+.. -..++..|+ .|+..|
T Consensus 9 ~C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~C~k~F 42 (60)
T 4gzn_C 9 FCGKTYRDASGLSRHRRAHLGYRPRSCP--ECGKCF 42 (60)
T ss_dssp TTCCEESSHHHHHHHHHHHHTCCCEECT--TTCCEE
T ss_pred CCCCEeCCHHHHHHHHHHhCCCcCeECC--CCCCCc
Confidence 455555434455555443 444555555 455554
No 87
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.18 E-value=1.5 Score=32.49 Aligned_cols=65 Identities=18% Similarity=0.194 Sum_probs=38.9
Q ss_pred hHHHHHhh-cCCceeeCCCCCCCCccccc-hhhhhcCcCCCcceeccCCCCCccc-cccccccccccccccccCCCC
Q 009502 184 ELNEHMLH-CGFISMICPNEGCNAKFSAG-HLEKHDSVCPFKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPF 257 (533)
Q Consensus 184 eLe~Hle~-C~yR~V~CpN~gC~e~~~~~-dLq~H~~~Cp~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF 257 (533)
.|..|+.. -..++..|+ .|+..+... .|.. ..+..|+ .|+.... +..|..|+...-...+..|+.
T Consensus 5 ~l~~H~~~h~~~~~~~C~--~C~k~f~~~~~l~~------~~~~~C~-~C~~~f~~~~~l~~H~~~H~~~~~~~C~~ 72 (73)
T 2ctu_A 5 SSGKRQKIHLGDRSQKCS--KCGIIFIRRSTLSR------RKTPMCE-KCRKDSCQEAALNKDEGNESGKKTSGPSS 72 (73)
T ss_dssp SCCCCCCCCCCCSEEECS--SSCCEEECCCCCCC------SSSCCCH-HHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred hHHHHHHHhCCCCCeeCC--cccchhCCHHHhCc------CCCCCCC-CCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence 34445432 445678888 788887533 2332 5677887 6885544 567888865444445556654
No 88
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=55.36 E-value=8.1 Score=28.18 Aligned_cols=35 Identities=17% Similarity=0.375 Sum_probs=18.3
Q ss_pred CCCcccccCchhHHHHHhh---cCCceeeCCCCCCCCccc
Q 009502 173 FHCNMKFNSEKELNEHMLH---CGFISMICPNEGCNAKFS 209 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~---C~yR~V~CpN~gC~e~~~ 209 (533)
..|+..+.+...|..|... -..++..|+ .|+..|.
T Consensus 14 ~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~k~f~ 51 (66)
T 2drp_A 14 KVCSRVYTHISNFCRHYVTSHKRNVKVYPCP--FCFKEFT 51 (66)
T ss_dssp TTTCCEESSHHHHHHHHHHHSSSSCCCEECT--TTCCEES
T ss_pred CCCcchhCCHHHHHHHHHHHcCCCCcCeECC--CCCCccC
Confidence 3466666444556666542 234555565 5655553
No 89
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=54.72 E-value=9.7 Score=28.34 Aligned_cols=48 Identities=27% Similarity=0.450 Sum_probs=29.9
Q ss_pred eecccCCCCcccccCchhHHHHHhh-cCCceeeCCCCCCCCcccc-chhhhhc
Q 009502 167 VDFKNEFHCNMKFNSEKELNEHMLH-CGFISMICPNEGCNAKFSA-GHLEKHD 217 (533)
Q Consensus 167 V~C~N~~GC~ekv~trkeLe~Hle~-C~yR~V~CpN~gC~e~~~~-~dLq~H~ 217 (533)
..|+. ..|+..+.....|..|+.. ...++..|+ .|+..|.. ..|..|.
T Consensus 20 ~~C~~-~~C~k~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~ 69 (73)
T 1f2i_G 20 YACPV-ESCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHI 69 (73)
T ss_dssp EECSS-TTBCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHH
T ss_pred cCCcC-CCCCCccCCHHHHHHHHHhhCCCCCeECC--CCCchhCCHHHHHHHH
Confidence 44542 3677777555677777654 566677777 67777643 3455554
No 90
>2vy4_A U11/U12 small nuclear ribonucleoprotein 48 kDa protein; splicing, mRNA processing, alternative splicing, transcription, nucleus, spliceosome; NMR {Homo sapiens} SCOP: g.37.1.7 PDB: 2vy5_A
Probab=54.34 E-value=6.5 Score=27.97 Aligned_cols=17 Identities=12% Similarity=0.305 Sum_probs=8.0
Q ss_pred CCCCCchhHHHHHHhhc
Q 009502 262 CQSTIPQCMIQQHRHDD 278 (533)
Q Consensus 262 C~~kv~R~eL~~He~ec 278 (533)
....+++..|..|+..|
T Consensus 12 ~~H~i~~~~l~~Hl~kC 28 (37)
T 2vy4_A 12 SNHHMPKSSLAKHMASC 28 (37)
T ss_dssp SSCEECGGGHHHHHHHH
T ss_pred CCeEeCHHHHHHHHHHH
Confidence 33444445555554444
No 91
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=54.27 E-value=5 Score=32.74 Aligned_cols=50 Identities=16% Similarity=0.410 Sum_probs=28.7
Q ss_pred CcceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCC-chhHHHHHHh
Q 009502 222 FKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTI-PQCMIQQHRH 276 (533)
Q Consensus 222 ~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R~eL~~He~ 276 (533)
..+..|+ .|+.... +..|..|+...-..++..|++ |...+ .+..|..|+.
T Consensus 26 ~~~h~C~-~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~----C~k~F~~~~~L~~H~~ 77 (85)
T 2lv2_A 26 AECHLCP-VCGESFASKGAQERHLRLLHAAQVFPCKY----CPATFYSSPGLTRHIN 77 (85)
T ss_dssp CTTEECT-TSCCEESSHHHHHHHHHTTSCSSSEECTT----SSCEESSHHHHHHHHH
T ss_pred CCCEECC-CCCCCcCcHHHHhhhhhhccCCCccCCCC----CCCEeCCHHHHHHhCc
Confidence 3445665 5775544 346667755445556667776 66554 3345666653
No 92
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=52.72 E-value=4.4 Score=29.68 Aligned_cols=48 Identities=23% Similarity=0.506 Sum_probs=21.3
Q ss_pred ceeccCCCCCccc-cccccccccc-c-ccccccCCCCCcCCCCCCCc-hhHHHHHHh
Q 009502 224 IIPCEQKCPDTLM-RRDMDRHCIT-V-CQMKLANCPFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 224 pV~Cpn~Cg~kI~-R~eLe~Hl~~-e-CPkr~V~CpF~~~GC~~kv~-R~eL~~He~ 276 (533)
+..|+ .|+.... +..|..|+.. . -...+..|++ |...+. +..|..|..
T Consensus 10 ~~~C~-~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~----C~k~f~~~~~L~~H~~ 61 (66)
T 2drp_A 10 TYRCK-VCSRVYTHISNFCRHYVTSHKRNVKVYPCPF----CFKEFTRKDNMTAHVK 61 (66)
T ss_dssp EEECT-TTCCEESSHHHHHHHHHHHSSSSCCCEECTT----TCCEESCHHHHHHHHH
T ss_pred ceECC-CCcchhCCHHHHHHHHHHHcCCCCcCeECCC----CCCccCCHHHHHHHHH
Confidence 44454 4554433 3345555322 1 2334455655 554432 334555543
No 93
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=50.59 E-value=5.4 Score=28.20 Aligned_cols=19 Identities=16% Similarity=0.424 Sum_probs=7.5
Q ss_pred cccccccccccccccCCCC
Q 009502 239 DMDRHCITVCQMKLANCPF 257 (533)
Q Consensus 239 eLe~Hl~~eCPkr~V~CpF 257 (533)
.|..|+...-...+..|++
T Consensus 16 ~l~~H~~~h~~~~~~~C~~ 34 (57)
T 1bbo_A 16 MLKKHIRTHTDVRPYHCTY 34 (57)
T ss_dssp HHHHHHHHTSSCCCEECSS
T ss_pred HHHHHHHhcCCCCCccCCC
Confidence 3444433323333444444
No 94
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.01 E-value=7.5 Score=29.45 Aligned_cols=43 Identities=19% Similarity=0.383 Sum_probs=23.8
Q ss_pred CCCcccccCchhHHHHHhh-c---CCceeeCCCCCCCCcccc-chhhhhc
Q 009502 173 FHCNMKFNSEKELNEHMLH-C---GFISMICPNEGCNAKFSA-GHLEKHD 217 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C---~yR~V~CpN~gC~e~~~~-~dLq~H~ 217 (533)
..|+..+.....|..|+.. . ..++..|+ .|+..|.. ..|..|+
T Consensus 11 ~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~--~C~k~f~~~~~L~~H~ 58 (78)
T 2d9h_A 11 EICGFTCRQKASLNWHQRKHAETVAALRFPCE--FCGKRFEKPDSVAAHR 58 (78)
T ss_dssp SSSCCEESSHHHHHHHHHHHHHHTTTCCEECT--TTCCEESSHHHHHHHH
T ss_pred CCCCCeeCCHHHHHHHHHHhhccCCCcccCCC--CCCchhCCHHHHHHHH
Confidence 3566666545566666543 3 24566676 56666642 3344454
No 95
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=46.96 E-value=6.8 Score=29.47 Aligned_cols=47 Identities=15% Similarity=0.424 Sum_probs=21.6
Q ss_pred ceeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCCc-hhHHHHHH
Q 009502 224 IIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTIP-QCMIQQHR 275 (533)
Q Consensus 224 pV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~-R~eL~~He 275 (533)
+..|+ .|+.... +..|..|+...-..++..|+. |...+. +..|..|.
T Consensus 17 ~~~C~-~C~k~f~~~~~l~~H~~~H~~~~~~~C~~----C~k~f~~~~~L~~H~ 65 (74)
T 2lce_A 17 PYKCD-RCQASFRYKGNLASHKTVHTGEKPYRCNI----CGAQFNRPANLKTHT 65 (74)
T ss_dssp SBCCT-TSSCCBSCHHHHHHHHHHHCCCCSEECTT----TCCEESCHHHHHHHH
T ss_pred CeECC-CCCceeCCHHHHHHHHHHcCCCCCEECCC----CCchhCCHHHHHHHH
Confidence 34454 4554433 334555543333344455655 554432 33455554
No 96
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=45.92 E-value=6.3 Score=27.81 Aligned_cols=46 Identities=20% Similarity=0.342 Sum_probs=20.9
Q ss_pred eeccCCCCCccc-cccccccccccccccccCCCCCcCCCCCCC-chhHHHHHH
Q 009502 225 IPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTI-PQCMIQQHR 275 (533)
Q Consensus 225 V~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv-~R~eL~~He 275 (533)
..|+ .|+.... ...|..|+...-..++..|++ |...+ .+..|..|+
T Consensus 5 ~~C~-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~~l~~H~ 52 (57)
T 3uk3_C 5 RECS-YCGKFFRSNYYLNIHLRTHTGEKPYKCEF----CEYAAAQKTSLRYHL 52 (57)
T ss_dssp CBCT-TTCCBCSCHHHHHHHHHHHHCCCCEECSS----SSCEESSHHHHHHHH
T ss_pred ccCC-CCcchhCChHHHHHHHHHcCCCCCcCCCC----CcchhCCHHHHHHHH
Confidence 3454 4554332 334555543333344555665 55433 233455554
No 97
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=45.61 E-value=13 Score=30.39 Aligned_cols=42 Identities=19% Similarity=0.412 Sum_probs=33.6
Q ss_pred CCCcccc-cCchhHHHHHhhcCCceeeCCCCCCCCcccc-chhhhh
Q 009502 173 FHCNMKF-NSEKELNEHMLHCGFISMICPNEGCNAKFSA-GHLEKH 216 (533)
Q Consensus 173 ~GC~ekv-~trkeLe~Hle~C~yR~V~CpN~gC~e~~~~-~dLq~H 216 (533)
..|+..+ .....|..|+.....++..|. .|+..|.. ..|..|
T Consensus 38 ~~C~k~F~~~~~~L~~H~~~h~~k~~~C~--~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 38 PTCQAVGRKTIEGLKKHMENCKQEMFTCH--HCGKQLRSLAGMKYH 81 (96)
T ss_dssp TTTCSCEESSHHHHHHHHHHHCCCCCCCS--SSCCCCSSHHHHHHH
T ss_pred CCCCCCcccCHHHHHHHHHHHCCCCeECC--CCCCeeCCHHHHHHH
Confidence 4699988 678899999764477888999 89999864 567778
No 98
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.27 E-value=7.8 Score=31.23 Aligned_cols=47 Identities=13% Similarity=0.304 Sum_probs=19.4
Q ss_pred ceeccCCCCCccc--ccccccccccccc-ccccCCCCCcCCCCCCCc-hhHHHHHH
Q 009502 224 IIPCEQKCPDTLM--RRDMDRHCITVCQ-MKLANCPFYAVGCQSTIP-QCMIQQHR 275 (533)
Q Consensus 224 pV~Cpn~Cg~kI~--R~eLe~Hl~~eCP-kr~V~CpF~~~GC~~kv~-R~eL~~He 275 (533)
+..|+ .|+..+. +..|..|+...-. .++..|++ |...+. +..|..|.
T Consensus 24 ~~~C~-~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~----C~k~F~~~~~L~~H~ 74 (98)
T 2gqj_A 24 EAVCP-TCNVVTRKTLVGLKKHMEVCQKLQDALKCQH----CRKQFKSKAGLNYHT 74 (98)
T ss_dssp CCCCT-TTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS----SCCCCSCHHHHHHHH
T ss_pred CcCCC-CCCCChhhhHHHHHHHHHHHcCCCCCEECCC----CCCccCCHHHHHHHH
Confidence 34444 4543332 3344445322222 34455555 554332 23444444
No 99
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.56 E-value=14 Score=27.94 Aligned_cols=42 Identities=21% Similarity=0.538 Sum_probs=20.8
Q ss_pred CCcccccCchhHHHHHh-h-cC-CceeeCCCCCCCCccc-cchhhhhc
Q 009502 174 HCNMKFNSEKELNEHML-H-CG-FISMICPNEGCNAKFS-AGHLEKHD 217 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle-~-C~-yR~V~CpN~gC~e~~~-~~dLq~H~ 217 (533)
.|+..+.+...|..|+. . -. .++..|+ .|+..|. ...|..|+
T Consensus 20 ~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~--~C~~~f~~~~~L~~H~ 65 (77)
T 2ct1_A 20 ICHARFTQSGTMKMHILQKHTENVAKFHCP--HCDTVIARKSDLGVHL 65 (77)
T ss_dssp TTCCEESCHHHHHHHHHHHSSSSCSSEECS--SSSCEESSHHHHHHHH
T ss_pred CcCchhCCHHHHHHHHHHhcCCCCCccCCC--CCCCccCCHHHHHHHH
Confidence 46666644455666653 2 22 1455665 5665553 23344443
No 100
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=44.48 E-value=8 Score=25.89 Aligned_cols=22 Identities=18% Similarity=0.492 Sum_probs=11.3
Q ss_pred CCcceeccCCCCCcccccccccc
Q 009502 221 PFKIIPCEQKCPDTLMRRDMDRH 243 (533)
Q Consensus 221 p~rpV~Cpn~Cg~kI~R~eLe~H 243 (533)
|.+.|.|| -|.+.|+-..+..|
T Consensus 3 pef~vqcp-vcqq~mpaahin~h 24 (29)
T 3vhs_A 3 PEFQVQCP-VCQQMMPAAHINSH 24 (29)
T ss_dssp --CEEECT-TTCCEEEGGGHHHH
T ss_pred CceeeeCh-HHHHhCcHHHHHHH
Confidence 44555565 55555555555555
No 101
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=43.78 E-value=6.9 Score=29.79 Aligned_cols=12 Identities=17% Similarity=0.631 Sum_probs=5.8
Q ss_pred ceeeCCCCCCCCcc
Q 009502 195 ISMICPNEGCNAKF 208 (533)
Q Consensus 195 R~V~CpN~gC~e~~ 208 (533)
++..|. .|+..|
T Consensus 3 Kpy~C~--~C~k~F 14 (60)
T 4gzn_C 3 RPFFCN--FCGKTY 14 (60)
T ss_dssp CCEECT--TTCCEE
T ss_pred CCccCC--CCCCEe
Confidence 344454 455554
No 102
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=43.50 E-value=7.1 Score=29.60 Aligned_cols=49 Identities=20% Similarity=0.400 Sum_probs=20.4
Q ss_pred cceeccCCCCCccc-ccccccccccccc-c-cccCCCCCcCCCCCCCc-hhHHHHHHh
Q 009502 223 KIIPCEQKCPDTLM-RRDMDRHCITVCQ-M-KLANCPFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 223 rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCP-k-r~V~CpF~~~GC~~kv~-R~eL~~He~ 276 (533)
.+..|+ .|+.... +..|..|+...-. . .+..|++ |...+. +..|..|..
T Consensus 14 k~~~C~-~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~----C~~~f~~~~~L~~H~~ 66 (77)
T 2ct1_A 14 KPYECY-ICHARFTQSGTMKMHILQKHTENVAKFHCPH----CDTVIARKSDLGVHLR 66 (77)
T ss_dssp CSEECT-TTCCEESCHHHHHHHHHHHSSSSCSSEECSS----SSCEESSHHHHHHHHH
T ss_pred CCeECC-CcCchhCCHHHHHHHHHHhcCCCCCccCCCC----CCCccCCHHHHHHHHH
Confidence 344554 4554333 2345555321111 1 3445555 554332 234555543
No 103
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.33 E-value=8.8 Score=29.06 Aligned_cols=7 Identities=29% Similarity=0.501 Sum_probs=3.4
Q ss_pred cccCCCC
Q 009502 251 KLANCPF 257 (533)
Q Consensus 251 r~V~CpF 257 (533)
++..|++
T Consensus 37 ~~~~C~~ 43 (78)
T 2d9h_A 37 LRFPCEF 43 (78)
T ss_dssp CCEECTT
T ss_pred cccCCCC
Confidence 3445554
No 104
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=40.45 E-value=22 Score=25.20 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=20.6
Q ss_pred CCCcccccCchhHHHHHh--hcCCceeeCCCCCCCCccc
Q 009502 173 FHCNMKFNSEKELNEHML--HCGFISMICPNEGCNAKFS 209 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle--~C~yR~V~CpN~gC~e~~~ 209 (533)
..|+..+.....|..|+. +-..++..|+ .|+..|.
T Consensus 16 ~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~--~C~k~F~ 52 (54)
T 2eps_A 16 QSCGKGFSRPDHLNGHIKQVHTSERPHKCQ--VWVSGPS 52 (54)
T ss_dssp SSSCCEESSHHHHHHHHHHTSCCCCCCCSS--SSCCSSC
T ss_pred CCCCcccCCHHHHHHHHHHhcCCCCCccCC--CCCCCCC
Confidence 356666654556667753 2455666666 5666553
No 105
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=40.08 E-value=13 Score=27.58 Aligned_cols=30 Identities=13% Similarity=0.361 Sum_probs=23.9
Q ss_pred ceeecccCCCCcccccCchhHHHHHhh-cCCc
Q 009502 165 KNVDFKNEFHCNMKFNSEKELNEHMLH-CGFI 195 (533)
Q Consensus 165 keV~C~N~~GC~ekv~trkeLe~Hle~-C~yR 195 (533)
+.++...|.+|+..+ ....+.+|+++ |.-+
T Consensus 13 ~~~~YRvC~~CgkPi-~lsAIvdHLenhC~~~ 43 (44)
T 2lo3_A 13 KPIQYRVCEKCGKPL-ALTAIVDHLENHCAGA 43 (44)
T ss_dssp CCCCEEECTTTCCEE-ETTTHHHHHHHCCTTC
T ss_pred ccccchhhcccCCcc-hHHHHHHHHHHHhccC
Confidence 346677789999999 69999999987 8643
No 106
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.75 E-value=8 Score=31.16 Aligned_cols=16 Identities=31% Similarity=0.532 Sum_probs=6.7
Q ss_pred CCccccc-CchhHHHHH
Q 009502 174 HCNMKFN-SEKELNEHM 189 (533)
Q Consensus 174 GC~ekv~-trkeLe~Hl 189 (533)
.|+..+. ....|..|+
T Consensus 29 ~C~k~f~~~~~~L~~H~ 45 (98)
T 2gqj_A 29 TCNVVTRKTLVGLKKHM 45 (98)
T ss_dssp TTCCCCSSCSHHHHHHH
T ss_pred CCCCChhhhHHHHHHHH
Confidence 3444442 233444443
No 107
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=37.08 E-value=14 Score=33.68 Aligned_cols=31 Identities=16% Similarity=0.000 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHH-HhCCceeeccccccccc
Q 009502 319 DVRSLSFAIKDLEA-KLGPFKEDTVNRYSGEG 349 (533)
Q Consensus 319 ~I~sL~~~VkdLE~-Ki~~le~WKI~~ysqkg 349 (533)
.|..|..++..+|. ...+...|+|++|++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~w~I~~fS~~~ 37 (178)
T 4gjh_A 6 QLNKNEERFKQLEGACYSGKLIWKVTDYRVKK 37 (178)
T ss_dssp HHHHHHHHHHHHHHCCSSSEEEEEECCHHHHH
T ss_pred HHHhHHHHHHHhcCcccceEEEEEECCHHHHH
Confidence 57778888999984 56789999999999743
No 108
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.08 E-value=23 Score=23.80 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=18.5
Q ss_pred CcceeccCCCCCccc-cccccccccccccccccCCCC
Q 009502 222 FKIIPCEQKCPDTLM-RRDMDRHCITVCQMKLANCPF 257 (533)
Q Consensus 222 ~rpV~Cpn~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF 257 (533)
..+..|+ .|+.... +..|..|+...-..++..|++
T Consensus 10 ~~~~~C~-~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytg_A 10 EKPFKCG-ECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCSEECT-TTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred CCCeECC-CCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 3456665 5765544 345666654433444455554
No 109
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=35.03 E-value=9.7 Score=31.68 Aligned_cols=48 Identities=21% Similarity=0.351 Sum_probs=21.0
Q ss_pred hhHHHHHhhcCCceeeCCCCCCCCcccc-chhhhhcCcCCCcceeccCCCCCc
Q 009502 183 KELNEHMLHCGFISMICPNEGCNAKFSA-GHLEKHDSVCPFKIIPCEQKCPDT 234 (533)
Q Consensus 183 keLe~Hle~C~yR~V~CpN~gC~e~~~~-~dLq~H~~~Cp~rpV~Cpn~Cg~k 234 (533)
..|..|...=..++..|+ .|+..|.. ..|..|...- ..+..|+ .|+..
T Consensus 61 ~~l~~h~~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H-~~~~~C~-~C~k~ 109 (129)
T 2wbt_A 61 SYLYRLLASKAISQFVCP--LCLMPFSSSVSLKQHIRYT-EHTKVCP-VCKKE 109 (129)
T ss_dssp HHHHHHHHHHHHCSEECT--TTCCEESSHHHHHHHHHHT-CCCCBCT-TTCCB
T ss_pred HHHHHHHHhCCCCCeECC--CCCcccCCHhHHHHHHHHC-CCCCCCC-CCCcc
Confidence 334444432223455666 56666532 3344444221 3334454 45443
No 110
>2vy4_A U11/U12 small nuclear ribonucleoprotein 48 kDa protein; splicing, mRNA processing, alternative splicing, transcription, nucleus, spliceosome; NMR {Homo sapiens} SCOP: g.37.1.7 PDB: 2vy5_A
Probab=34.16 E-value=12 Score=26.65 Aligned_cols=30 Identities=10% Similarity=0.435 Sum_probs=21.7
Q ss_pred CcceeccCCCCCccccccccccccccccccc
Q 009502 222 FKIIPCEQKCPDTLMRRDMDRHCITVCQMKL 252 (533)
Q Consensus 222 ~rpV~Cpn~Cg~kI~R~eLe~Hl~~eCPkr~ 252 (533)
...+.||....-.|++..|+.|+ ..|+.+.
T Consensus 3 ~~~v~CPyd~~H~i~~~~l~~Hl-~kC~~r~ 32 (37)
T 2vy4_A 3 DEVVICPYDSNHHMPKSSLAKHM-ASCRLRK 32 (37)
T ss_dssp CCCEECTTTSSCEECGGGHHHHH-HHHHHHH
T ss_pred ceEEECCCCCCeEeCHHHHHHHH-HHHhhhh
Confidence 35677886677788888888884 6676643
No 111
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=32.34 E-value=26 Score=23.48 Aligned_cols=28 Identities=18% Similarity=0.406 Sum_probs=16.3
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 14 ~~C~k~f~~~~~l~~H~~~H~~~~~~~C~ 42 (45)
T 2epq_A 14 PVCGLRFKRKDRMSYHVRSHDGSVGKSGP 42 (45)
T ss_dssp TTTTEECSCHHHHHHHHHHHSCCCCCCCC
T ss_pred CCCCcccCCHHHHHHHHHHccCCCCCCCc
Confidence 3566666444566666553 555566666
No 112
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=31.47 E-value=20 Score=26.52 Aligned_cols=50 Identities=16% Similarity=0.376 Sum_probs=24.1
Q ss_pred cceecc-CCCCCccc-cccccccccccccccccCCCCCcCCCCCCCc-hhHHHHHHh
Q 009502 223 KIIPCE-QKCPDTLM-RRDMDRHCITVCQMKLANCPFYAVGCQSTIP-QCMIQQHRH 276 (533)
Q Consensus 223 rpV~Cp-n~Cg~kI~-R~eLe~Hl~~eCPkr~V~CpF~~~GC~~kv~-R~eL~~He~ 276 (533)
.+..|+ ..|+.... +..|..|+......++..|++ |...+. +..|..|..
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~----C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI----CMRNFSRSDHLTTHIR 70 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT----TCCEESCHHHHHHHHT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC----CCchhCCHHHHHHHHH
Confidence 445554 24654433 344555544334444556665 554432 344555543
No 113
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=31.19 E-value=71 Score=27.05 Aligned_cols=46 Identities=15% Similarity=0.278 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhcccCCCccCCCCccccchHHHHHHHHHh
Q 009502 32 TEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTK 79 (533)
Q Consensus 32 ~e~vh~~a~~ll~glA~a~vd~t~g~~f~~p~sva~~~~~em~~yl~q 79 (533)
..+...-++.|-..| -|.-..+-.|.-|++.+|.|||.++-+-|.+
T Consensus 10 ~~~~e~r~~~L~~~L--RCpvCqnqsI~dSnA~iA~dlR~~Vre~l~~ 55 (90)
T 2kw0_A 10 DEAQEQQFRQLTEEL--RCPKCQNNSIADSNSMIATDLRQKVYELMQE 55 (90)
T ss_dssp SHHHHHHHHHHHHSS--BCSCTTSCTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcC--cCCCCCCCchhhcCcHHHHHHHHHHHHHHHc
Confidence 344455556666666 6776666678889999999999998887776
No 114
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=30.20 E-value=14 Score=32.86 Aligned_cols=30 Identities=10% Similarity=0.134 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHH-HhCCceeeccccccccc
Q 009502 320 VRSLSFAIKDLEA-KLGPFKEDTVNRYSGEG 349 (533)
Q Consensus 320 I~sL~~~VkdLE~-Ki~~le~WKI~~ysqkg 349 (533)
|.+|..++.+++. ...+...|+|++|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~w~I~nfS~~~ 32 (168)
T 1d00_A 2 MADLEQKVLEMEASTYDGVFIWKISDFARKR 32 (168)
T ss_dssp CHHHHHHHHHHHTCCSSSEEEEEEESHHHHH
T ss_pred hHHHHHHHHHhhccccCCEEEEEECCHHHHH
Confidence 4567777888884 47889999999999753
No 115
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=27.46 E-value=92 Score=25.92 Aligned_cols=47 Identities=15% Similarity=0.276 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHhhhhhhhhhcccCCCccCCCCccccchHHHHHHHHHh
Q 009502 31 DTEIVHKIAQEFLPGLASACVDNTTGDIFRTPGSVAVGIRTEMVEYLTK 79 (533)
Q Consensus 31 d~e~vh~~a~~ll~glA~a~vd~t~g~~f~~p~sva~~~~~em~~yl~q 79 (533)
+......-++.|-..| -|.-..+-.|.-|.+.+|.|||.+.-+-|.+
T Consensus 12 ~~~~~e~r~~~l~~~L--RCp~Cqnqsi~dSna~iA~dlR~~V~~~l~~ 58 (84)
T 2hl7_A 12 ASDAERERFRNLTQEL--RCPKCQNQDIADSNAPIAADLRKQIYGQLQQ 58 (84)
T ss_dssp SSHHHHHHHHHHHHHE--ECTTSSSCBTTTCCSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC--cCCCCCCCchhhcCcHHHHHHHHHHHHHHHc
Confidence 4455555666666666 6777666778899999999999999887777
No 116
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.75 E-value=37 Score=23.16 Aligned_cols=27 Identities=26% Similarity=0.305 Sum_probs=14.4
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (48)
T 2epr_A 17 ICGKIFRDVYHLNRHKLSHSGEKPYSSG 44 (48)
T ss_dssp TTTEEESSHHHHHHHGGGSCSCCCCCSC
T ss_pred CCCcccCCHHHHHHHHHhcCCCCCccCC
Confidence 466666444556666543 444455555
No 117
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.65 E-value=45 Score=22.16 Aligned_cols=27 Identities=22% Similarity=0.141 Sum_probs=13.2
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eme_A 17 YCGKAFGLSAELVRHQRIHTGEKPSGPS 44 (46)
T ss_dssp SSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred CCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 455555444555556543 333444444
No 118
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.10 E-value=46 Score=22.26 Aligned_cols=28 Identities=18% Similarity=0.138 Sum_probs=13.8
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2elz_A 16 EDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44 (46)
T ss_dssp SSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred cccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 3555555444555556443 333444444
No 119
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=25.89 E-value=53 Score=21.94 Aligned_cols=28 Identities=21% Similarity=0.199 Sum_probs=14.9
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ely_A 16 VECGKGFSRRSALNVHHKLHTGEKPSGPS 44 (46)
T ss_dssp SSSCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred CccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 4566666444556666543 444455554
No 120
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.49 E-value=50 Score=21.94 Aligned_cols=28 Identities=18% Similarity=0.101 Sum_probs=15.1
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eov_A 16 SDCGKSFTWKSRLRIHQKCHTGERHSGPS 44 (46)
T ss_dssp SSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred CccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 4566666444556666543 444455554
No 121
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.22 E-value=47 Score=22.05 Aligned_cols=28 Identities=18% Similarity=0.160 Sum_probs=13.9
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytr_A 16 NECGKAFSQTSKLARHQRIHTGEKPSGPS 44 (46)
T ss_dssp TTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred CCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence 3466665444555566543 333444454
No 122
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.52 E-value=45 Score=22.30 Aligned_cols=27 Identities=22% Similarity=0.231 Sum_probs=12.8
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em5_A 17 ECGRGFTLKSHLNQHQRIHTGEKPSGPS 44 (46)
T ss_dssp SSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred cCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 455555444555555533 333444444
No 123
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=24.09 E-value=43 Score=27.59 Aligned_cols=43 Identities=26% Similarity=0.447 Sum_probs=31.5
Q ss_pred CCCCcccccCchhHHHHHhhcCCceeeCCCCCCCCcccc-chhhhhc
Q 009502 172 EFHCNMKFNSEKELNEHMLHCGFISMICPNEGCNAKFSA-GHLEKHD 217 (533)
Q Consensus 172 ~~GC~ekv~trkeLe~Hle~C~yR~V~CpN~gC~e~~~~-~dLq~H~ 217 (533)
|..|+..+.....|..|+..- .++..|+ .|+..|.. ..|..|.
T Consensus 77 C~~C~k~f~~~~~l~~H~~~H-~~~~~C~--~C~k~f~~~~~l~~H~ 120 (129)
T 2wbt_A 77 CPLCLMPFSSSVSLKQHIRYT-EHTKVCP--VCKKEFTSTDSALDHV 120 (129)
T ss_dssp CTTTCCEESSHHHHHHHHHHT-CCCCBCT--TTCCBCSSHHHHHHHH
T ss_pred CCCCCcccCCHhHHHHHHHHC-CCCCCCC--CCCcccCCHHHHHHHH
Confidence 357999996667888997643 5678998 89999854 4455664
No 124
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.76 E-value=53 Score=21.88 Aligned_cols=27 Identities=19% Similarity=0.182 Sum_probs=13.5
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eml_A 17 VCGKAFSHRQSLSVHQRIHSGKKPSGPS 44 (46)
T ss_dssp SSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred CcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence 466665444555566543 333444444
No 125
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.69 E-value=56 Score=21.67 Aligned_cols=27 Identities=15% Similarity=0.025 Sum_probs=13.7
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2epw_A 17 ECGKAFCWKSQLIMHQRTHVDDKHSGPS 44 (46)
T ss_dssp SSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred CCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 466665444556666543 333444454
No 126
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=23.53 E-value=54 Score=21.91 Aligned_cols=28 Identities=18% Similarity=0.136 Sum_probs=15.5
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emk_A 16 KECGKAFSQTTHLIQHQRVHTGEKPSGPS 44 (46)
T ss_dssp SSSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred CCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 4566666544566666543 444555554
No 127
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.52 E-value=18 Score=30.35 Aligned_cols=54 Identities=15% Similarity=0.054 Sum_probs=30.5
Q ss_pred CCCcccccCchhHHHHHhh-c----CCceeeCCCCCCCCccc-cchhhhh-cC-cCCCcceecc
Q 009502 173 FHCNMKFNSEKELNEHMLH-C----GFISMICPNEGCNAKFS-AGHLEKH-DS-VCPFKIIPCE 228 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C----~yR~V~CpN~gC~e~~~-~~dLq~H-~~-~Cp~rpV~Cp 228 (533)
..|+..+.....|..|+.. - ..++..|+ .|+..|. ...|..| .. .=...+..|.
T Consensus 22 ~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~--~Cgk~F~~~~~L~~H~~r~Htgekpy~C~ 83 (102)
T 2ghf_A 22 KYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCV--ECNFLTKRYDALSEHNLKYHPGEENFKLT 83 (102)
T ss_dssp SSCSCEESCHHHHHHHHHHHCSSCCCSCCEEET--TTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred CCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence 4577777555667777642 2 34567777 6777764 3445566 31 2234455554
No 128
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.07 E-value=53 Score=21.78 Aligned_cols=28 Identities=18% Similarity=0.082 Sum_probs=12.9
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eop_A 16 RECGKSFSFNSQLIVHQRIHTGENPSGPS 44 (46)
T ss_dssp TTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred CCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 3455555444455555432 333344444
No 129
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.00 E-value=47 Score=22.21 Aligned_cols=28 Identities=14% Similarity=0.110 Sum_probs=15.7
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em8_A 16 VECGKGYKRRLDLDFHQRVHTGEKLSGPS 44 (46)
T ss_dssp SSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred cccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence 4566666444566666543 444555555
No 130
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=22.91 E-value=55 Score=21.79 Aligned_cols=28 Identities=21% Similarity=0.177 Sum_probs=13.3
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em0_A 16 RECDMCFSQASSLRLHQNVHVGEKPSGPS 44 (46)
T ss_dssp SSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred CCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence 3455555444455555433 333444444
No 131
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.88 E-value=56 Score=21.72 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=12.2
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2epz_A 17 DCGKAFSDHIGLNQHRRIHTGEKPSGPS 44 (46)
T ss_dssp TTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred CCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence 455555433455555432 333344443
No 132
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.83 E-value=51 Score=21.94 Aligned_cols=27 Identities=19% Similarity=0.118 Sum_probs=12.7
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ep0_A 17 VCHKSFRYGSSLTVHQRIHTGEKPSGPS 44 (46)
T ss_dssp SSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred ccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence 455555444455555442 333344444
No 133
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.75 E-value=54 Score=21.74 Aligned_cols=28 Identities=18% Similarity=0.078 Sum_probs=14.5
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eq4_A 16 KECGKSFSRAPCLLKHERLHSGEKPSGPS 44 (46)
T ss_dssp TTTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred CCCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence 3566666444556666543 334444554
No 134
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.57 E-value=59 Score=21.61 Aligned_cols=27 Identities=19% Similarity=0.150 Sum_probs=12.0
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytn_A 17 ECGKVFTQNSHLARHRGIHTGEKPSGPS 44 (46)
T ss_dssp TTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred CCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence 455555433445555432 333344443
No 135
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=22.54 E-value=54 Score=21.73 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=12.3
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2el4_A 17 QCAKTFSLKSQLIVHQRSHTGVKPSGPS 44 (46)
T ss_dssp SSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred CCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 455555444455555433 333344443
No 136
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=22.54 E-value=54 Score=21.76 Aligned_cols=27 Identities=19% Similarity=0.096 Sum_probs=11.8
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em9_A 17 ECGKSFRWASCLLKHQRVHSGEKPSGPS 44 (46)
T ss_dssp SSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred ccccccCChHHHHHHHHHhCCCCCCCCC
Confidence 455555333445555432 333344443
No 137
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.19 E-value=49 Score=21.96 Aligned_cols=28 Identities=18% Similarity=0.196 Sum_probs=15.1
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eoe_A 16 NECGKVFTQNSHLANHQRIHTGVKPSGPS 44 (46)
T ss_dssp TTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred CCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence 3566666444566666543 344455554
No 138
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.05 E-value=50 Score=22.16 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=15.6
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytm_A 16 MECGKAFGDNSSCTQHQRLHTGQRPSGPS 44 (46)
T ss_dssp TTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred CCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 4566666444566666543 444555555
No 139
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.02 E-value=49 Score=21.95 Aligned_cols=28 Identities=18% Similarity=0.096 Sum_probs=14.2
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emm_A 16 NECGKSFIQSAHLIQHQRIHTGEKPSGPS 44 (46)
T ss_dssp SSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred CCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 3466666444556666543 334444454
No 140
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.01 E-value=56 Score=21.75 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=14.6
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytd_A 16 SECGKAFHRHTHLNEHRRIHTGYRPSGPS 44 (46)
T ss_dssp SSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred CCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence 3466666444556666543 444455554
No 141
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.99 E-value=52 Score=21.85 Aligned_cols=16 Identities=25% Similarity=0.397 Sum_probs=7.5
Q ss_pred CCcccccCchhHHHHH
Q 009502 174 HCNMKFNSEKELNEHM 189 (533)
Q Consensus 174 GC~ekv~trkeLe~Hl 189 (533)
.|+..+.....|..|+
T Consensus 17 ~C~k~f~~~~~L~~H~ 32 (46)
T 2en8_A 17 ECGKNFCYISALRIHQ 32 (46)
T ss_dssp TTCCEESSHHHHHHHH
T ss_pred CcCcccCCHHHHHHHH
Confidence 4555553334445554
No 142
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.94 E-value=58 Score=21.72 Aligned_cols=28 Identities=25% Similarity=0.183 Sum_probs=12.9
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytq_A 16 SECGKAFSSKSYLIIHMRTHSGEKPSGPS 44 (46)
T ss_dssp SSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred CccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence 3455555444455555442 333344443
No 143
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.89 E-value=55 Score=21.77 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=11.7
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2em7_A 17 ECGKGFICRRDLYTHHMVHTGEKPSGPS 44 (46)
T ss_dssp SSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred CccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 455555333445555432 333334443
No 144
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.71 E-value=56 Score=21.72 Aligned_cols=28 Identities=18% Similarity=0.189 Sum_probs=14.2
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emy_A 16 HECGKAFSRKYQLISHQRTHAGEKPSGPS 44 (46)
T ss_dssp SSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred CCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence 3466666444555666543 334444554
No 145
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.60 E-value=59 Score=21.63 Aligned_cols=28 Identities=21% Similarity=0.096 Sum_probs=14.2
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yso_A 16 RECGEIFFQYVSLIEHQVLHMGQKNSGPS 44 (46)
T ss_dssp TTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred cccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 3466666444555666543 444445554
No 146
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.42 E-value=62 Score=21.51 Aligned_cols=28 Identities=18% Similarity=0.119 Sum_probs=14.6
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eoq_A 16 DICGKSFCGRSRLNRHSMVHTAEKPSGPS 44 (46)
T ss_dssp SSSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred CcCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 4566666444556666543 333444554
No 147
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.31 E-value=51 Score=21.93 Aligned_cols=28 Identities=18% Similarity=0.154 Sum_probs=15.0
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emp_A 16 NECGKAFSVYSSLTTHQVIHTGEKPSGPS 44 (46)
T ss_dssp SSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred CCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 3566666444566666543 344455554
No 148
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=21.15 E-value=65 Score=21.48 Aligned_cols=27 Identities=15% Similarity=0.064 Sum_probs=13.5
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2el6_A 17 QCEKSFSGKLRLLVHQRMHTREKPSGPS 44 (46)
T ss_dssp SSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 466665444555566543 333444444
No 149
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.14 E-value=50 Score=22.00 Aligned_cols=28 Identities=18% Similarity=0.121 Sum_probs=13.9
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2yu8_A 16 NECGKVFTQNSHLARHRRVHTGGKPSGPS 44 (46)
T ss_dssp SSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred CcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence 3466665444555556432 333444454
No 150
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.05 E-value=66 Score=26.82 Aligned_cols=61 Identities=10% Similarity=-0.012 Sum_probs=40.6
Q ss_pred CceeeCCCCCCCCccc-cchhhhhcC--c---CCCcceeccCCCCCccc-ccccccc-ccccccccccCCCC
Q 009502 194 FISMICPNEGCNAKFS-AGHLEKHDS--V---CPFKIIPCEQKCPDTLM-RRDMDRH-CITVCQMKLANCPF 257 (533)
Q Consensus 194 yR~V~CpN~gC~e~~~-~~dLq~H~~--~---Cp~rpV~Cpn~Cg~kI~-R~eLe~H-l~~eCPkr~V~CpF 257 (533)
.++..|+ .|+..|. ...|..|.. . -...+..|+ .|+.... +..|..| ...--..++..|..
T Consensus 16 ekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~-~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~ 84 (102)
T 2ghf_A 16 EGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCV-ECNFLTKRYDALSEHNLKYHPGEENFKLTM 84 (102)
T ss_dssp CSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEET-TTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred CcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCC-CCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence 4678898 8999986 455777763 2 346789998 8997654 5678888 43333344455554
No 151
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.01 E-value=62 Score=21.48 Aligned_cols=28 Identities=18% Similarity=0.135 Sum_probs=13.5
Q ss_pred CCCcccccCchhHHHHHh-h-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHML-H-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle-~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+. . -..++..|+
T Consensus 16 ~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~ 45 (47)
T 2epx_A 16 IECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45 (47)
T ss_dssp SSSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred CccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence 345555544455555654 2 333444444
No 152
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.85 E-value=62 Score=21.50 Aligned_cols=17 Identities=24% Similarity=0.446 Sum_probs=8.1
Q ss_pred CCcccccCchhHHHHHh
Q 009502 174 HCNMKFNSEKELNEHML 190 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle 190 (533)
.|+..+.....|..|+.
T Consensus 17 ~C~k~f~~~~~L~~H~~ 33 (46)
T 2ene_A 17 ECGKVFRHNSYLSRHQR 33 (46)
T ss_dssp SSCCEESSHHHHHHHHT
T ss_pred CCCchhCChHHHHHHHh
Confidence 45555533344555543
No 153
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.66 E-value=46 Score=22.19 Aligned_cols=27 Identities=22% Similarity=0.207 Sum_probs=12.7
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ysp_A 17 KCGKGYNSKFNLDMHQKVHTGERPSGPS 44 (46)
T ss_dssp TTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred CCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence 455555434455555543 333444444
No 154
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.63 E-value=50 Score=22.06 Aligned_cols=28 Identities=21% Similarity=0.176 Sum_probs=14.8
Q ss_pred CCCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 173 FHCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 173 ~GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
..|+..+.....|..|+.. -..++..|+
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eoo_A 16 NECGKNFGRHSHLIEHLKRHFREKSSGPS 44 (46)
T ss_dssp SSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred cccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence 3566666444556666543 334445554
No 155
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.07 E-value=54 Score=21.84 Aligned_cols=27 Identities=19% Similarity=0.274 Sum_probs=13.8
Q ss_pred CCcccccCchhHHHHHhh-cCCceeeCC
Q 009502 174 HCNMKFNSEKELNEHMLH-CGFISMICP 200 (533)
Q Consensus 174 GC~ekv~trkeLe~Hle~-C~yR~V~Cp 200 (533)
.|+..+.....|..|+.. -..++..|+
T Consensus 17 ~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2en1_A 17 ECGKRFTQNSQLHSHQRVHTGEKPSGPS 44 (46)
T ss_dssp TTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 466666444556666543 334444454
Done!