BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009506
(533 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/436 (80%), Positives = 391/436 (89%), Gaps = 3/436 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K YD RAR EKWRIDP FSTLI++YG +GNFDGCLNVYEEMKA+GVKPN++ YN LLD
Sbjct: 267 KLYD-RARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDA 325
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
MGRAKRPWQ K IYKEMT+NGL P+W TYA+LLRAYGRARY ED L VY+EMKEKG++LS
Sbjct: 326 MGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELS 385
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V LYNTLLAMCADVGYT+EA IFEDMKSS NC PDSWTFSS+ITI SC GKVSEAEAM
Sbjct: 386 VVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAML 445
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
N MLEAGFEPN+FVLTSLIQCYGKA RTD+VVR +RL EL ITPDDRFCGC+LNVMTQ+
Sbjct: 446 NAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQS 505
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI 392
PKEELGKL++C++K+N KLG VVKLLLEEQ+ EG F+KEA+ELF+SIS DVKKAYCNCLI
Sbjct: 506 PKEELGKLIDCIDKANPKLGNVVKLLLEEQNGEGTFRKEASELFDSISADVKKAYCNCLI 565
Query: 393 DLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
DLCVNLNLLE AC+L +LGLTLE+Y DIQS+SPTQWSLHLKSLSLGAALTALHIW+NDLS
Sbjct: 566 DLCVNLNLLEKACELFDLGLTLEIYIDIQSKSPTQWSLHLKSLSLGAALTALHIWMNDLS 625
Query: 453 KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
KA+E GEE P +LGINTGHGKHKYSDKGLASVFESHLKELNAPFH++PDKVGWFLTT+ A
Sbjct: 626 KAVEVGEELPAVLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPDKVGWFLTTKVA 685
Query: 513 AKSWLESRSS--LVSV 526
A SWLESRS+ LV+V
Sbjct: 686 ATSWLESRSAPELVAV 701
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 153/353 (43%), Gaps = 76/353 (21%)
Query: 1 MASNLCYSTCSL------------FSTPKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSL 48
MA +LC S SL FS R +FSF + +SLS +S+T LQ VSL
Sbjct: 1 MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSF-KPNSLSLHSRTFLQITHVSL 59
Query: 49 -----QETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEK 103
QETQ ++ + + N Q P KT KSYIWVNP+SPRASKL++ SYD R
Sbjct: 60 EDPIPQETQKADAS-NPPNSQDPDRKT----KSYIWVNPRSPRASKLRQHSYDAR----- 109
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYE--------------EMKAIGVKPNM------ 143
+++L+K+ A + D C E E A+ V NM
Sbjct: 110 -------YASLVKI---AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETA 159
Query: 144 -----------------ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
I YN L + + + + ++ EM + G+ P+ T+++++
Sbjct: 160 LLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIIS 219
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
+ + + +M E G Y+ ++ G D A +++ D +E +
Sbjct: 220 CARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLY-DRARTEKWR 278
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
D TFS++I I G ++ EM G +PNL + +L+ G+A+R
Sbjct: 279 IDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKR 331
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
CR + AE +F+EMLE G +P+ +++I C + + V ++PE G PDD
Sbjct: 189 CRN-LDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDD 246
>gi|147841962|emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/436 (79%), Positives = 388/436 (88%), Gaps = 3/436 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K YD RAR EKWRIDP FSTLI++YG +GNFDGCLNVYEEMKA+GVKPN++ YN LLD
Sbjct: 267 KLYD-RARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDA 325
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
MGRAKRPWQ K IYKEMT+NGL +W TYA+LLRAYGRARY ED L VY+EMKEKG++LS
Sbjct: 326 MGRAKRPWQAKNIYKEMTNNGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELS 385
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V LYNTLLAMCADVGYT+EA IFEDMKSS NC PDSWTFSS+ITI SC GKVSEAEAM
Sbjct: 386 VVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKVSEAEAML 445
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
N MLEAGFEPN+FVLTSLIQCYGKA RTD+VVR +RL EL ITPDDRFCGC+LNVMTQ+
Sbjct: 446 NAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMTQS 505
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI 392
PKEELGKL++C++K+N KLG VVKLLLEEQ+ EG F+KEA+ELF+SIS DV KAYCNCLI
Sbjct: 506 PKEELGKLIDCIDKANPKLGNVVKLLLEEQNGEGTFRKEASELFDSISADVXKAYCNCLI 565
Query: 393 DLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
DLCVNLNLLE AC+L +LGLTLE+Y DIQS+SPTQWSLHLKSLSLGAALTALHIW+NDLS
Sbjct: 566 DLCVNLNLLEKACELFDLGLTLEIYIDIQSKSPTQWSLHLKSLSLGAALTALHIWMNDLS 625
Query: 453 KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
KA+E GEE P +LGINTGHGKHKYSDKGLASVFESHLKELNAPFH++PDKV WFLTT+ A
Sbjct: 626 KAVEVGEELPAVLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPDKVXWFLTTKVA 685
Query: 513 AKSWLESRSS--LVSV 526
A SWLESRS+ LV+V
Sbjct: 686 ATSWLESRSAPELVAV 701
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 152/353 (43%), Gaps = 76/353 (21%)
Query: 1 MASNLCYSTCSL------------FSTPKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSL 48
MA +LC S SL FS R +FSF + +SLS +S+T LQ VSL
Sbjct: 1 MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSF-KPNSLSLHSRTFLQITHVSL 59
Query: 49 -----QETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEK 103
QETQ ++ + + N Q P KT KSYIWVNP+SPRASKL++ SYD R
Sbjct: 60 EDPIPQETQKADAS-NPPNSQDPDRKT----KSYIWVNPRSPRASKLRQHSYDAR----- 109
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYE--------------EMKAIGVKPNM------ 143
+++L+K+ A + D C E E A+ V NM
Sbjct: 110 -------YASLVKI---AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETA 159
Query: 144 -----------------ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
I YN L + + + ++ EM + G+ P+ T+++++
Sbjct: 160 LLAFGFFRKRLKPSREVILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIIS 219
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
+ + + +M E G Y+ ++ G D A +++ D +E +
Sbjct: 220 CARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLY-DRARTEKWR 278
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
D TFS++I I G ++ EM G +PNL + +L+ G+A+R
Sbjct: 279 IDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKR 331
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
CR + AE +F+EMLE G +P+ +++I C + + V ++PE G PDD
Sbjct: 189 CRN-LDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDD 246
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/428 (78%), Positives = 384/428 (89%), Gaps = 1/428 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR E WRIDP FST+IK++G AGN+DGCLNVYEEMKAIG+KPN++ YN LLD MG
Sbjct: 272 YD-RARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMG 330
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQ+KTIYKEM NG SP+W TYASLLRAYGRARYGED L VY+EMKEKG+QL+V
Sbjct: 331 RAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVI 390
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLLAMCADVGY +EA EIF+DMKSS C PDSWTFSSMITI SC GKVSEAE M N+
Sbjct: 391 LYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLND 450
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+EAGF+PN+FVLTSLIQCYGKA+R DDVVR N+L ELG+TPDDRFCGCLLNV+TQTPK
Sbjct: 451 MVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPK 510
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
ELGKL++CV ++N KLG+VV+LLL EQD EG+F+ EA+ELF+ +S DV+KAYCNCLIDL
Sbjct: 511 GELGKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDL 570
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
CVNL+LL+ AC+LL+LGLTL++Y D+QSRSPTQWSL+LK LSLGAALTALH+WI DL+K
Sbjct: 571 CVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKV 630
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
LESGEE PPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFH++P+KVGWFLTT+ AAK
Sbjct: 631 LESGEELPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAK 690
Query: 515 SWLESRSS 522
SWLESRSS
Sbjct: 691 SWLESRSS 698
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 168/354 (47%), Gaps = 40/354 (11%)
Query: 1 MASNLCYSTCSLFSTPKLGRRTFTFSFQRDDSLS------------FYSKTSLQKRSVSL 48
MA LCYS + F+ + T QR +LS +SK LQ +VSL
Sbjct: 1 MAFQLCYSPPTFFTEHHFLSNSLTP--QRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSL 58
Query: 49 QE-----TQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEK 103
QE TQ++ P+ + +YP K+GSS S +WVNP+SPRASKL+++SY+ R
Sbjct: 59 QEHAPQDTQNTIPSA-DEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEAR----- 112
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGC-LNVYEEMKAIGVKPNMITYNNL--LDTMGRAKRPW 160
+++LI++ + + + C ++V + +K IG N++ + + L+ M ++
Sbjct: 113 -------YASLIRVSESLDSSNPCEVDVADVLKVIG--NNILERDAILVLNNMSNSQTAL 163
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+++M + S Y L+ + + R E ++ EM +G++ ++T++
Sbjct: 164 LALRYFQDMLKS--SKQTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTII 221
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ +A E FE M S + C PD T+S+MI G V A ++++ +
Sbjct: 222 SCARLCSLPSKAVEWFEKMPSFD-CNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENW 280
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ +++I+ +G A D + + +GI P+ CLL+ M + +
Sbjct: 281 RIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKR 334
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K++ + +G ++EEM GVKP+ +T++ ++ P + +++M
Sbjct: 182 YNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMP 241
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+P+ TY++++ AYGRA + S+Y + + ++ ++T++ + G D
Sbjct: 242 SFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYD 301
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
++E+MK+ +P+ ++ ++ + + + ++ EM++ GF P+ SL
Sbjct: 302 GCLNVYEEMKAI-GIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 291 IQCYGKAQRTDDVVRALNRLPELGI 315
++ YG+A+ +D + + E G+
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGL 385
>gi|26452823|dbj|BAC43491.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 702
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/436 (73%), Positives = 379/436 (86%), Gaps = 3/436 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWRID FSTLI++YG +GN+DGCLN+YEEMKA+GVKPN++ YN L+D+MG
Sbjct: 268 YD-RARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMG 326
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQ K IYK++ NG +PNW+TYA+L+RAYGRARYG+D L++YREMKEKG+ L+V
Sbjct: 327 RAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVI 386
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLL+MCAD+GY DEAFEIF+DMK+ E C PDSWTFSS+IT+ +C G+VSEAEA +
Sbjct: 387 LYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQ 446
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M EAGFEP LFVLTS+IQCYGKA++ DDVVR +++ ELGITPDDRFCGCLLNVMTQTP
Sbjct: 447 MREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPS 506
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDI-EGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+GKL+ CVEK+ KLG VVK+L+EEQ+ EG FKKEA+EL +SI DVKKAY NCLID
Sbjct: 507 EEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLID 566
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
LCVNLN LE AC++L+LGL ++YT +QS+S TQWSLHLKSLSLGAALTALH+W+NDLS+
Sbjct: 567 LCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSE 626
Query: 454 -ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
ALESGEEFPPLLGINTGHGKHKYSDKGLA+VFESHLKELNAPFH++PDKVGWFLTT A
Sbjct: 627 AALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVA 686
Query: 513 AKSWLESRSSLVSVPA 528
AK+WLESR S V A
Sbjct: 687 AKAWLESRRSAGGVSA 702
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 158/341 (46%), Gaps = 33/341 (9%)
Query: 10 CSLFST-PKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHG 68
C+L S PK R+F S+ + S F+S+ LQ VS+QE + + P
Sbjct: 21 CNLLSVYPKSTPRSFLSSYNPNSS-HFHSRNLLQATHVSVQEAIPQSEKSKLVDVDLPIP 79
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC- 127
+ +S KSY+WVNPKSPRAS+L+ KSYD+R +S+LIKL A + D C
Sbjct: 80 EPTAS-KSYVWVNPKSPRASQLRRKSYDSR------------YSSLIKL---AESLDACK 123
Query: 128 ---LNVYEEMKAIGVK----PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
+V + + G K ++T NN+ + P + + + M S
Sbjct: 124 PNEADVCDVITGFGGKLFEQDAVVTLNNMTNP---ETAPLVLNNLLETMKP---SREVIL 177
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y ++ + +++ E + ++ EM E+G++ + T+++ G A E FE M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM- 236
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
SS C+PD+ T ++MI G V A ++++ + + ++LI+ YG +
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
D + + LG+ P+ L++ M + + K++
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKII 337
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K++ + + + +++EM G+KP+ T+ ++ + P + +++M+
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T A+++ AYGRA + LS+Y + + ++ ++TL+ + G D
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
I+E+MK+ +P+ ++ +I + +A+ ++ +++ GF PN +L
Sbjct: 298 GCLNIYEEMKAL-GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 291 IQCYGKAQRTDDVVRALNRLPELGIT 316
++ YG+A+ DD + + E G++
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLS 382
>gi|224137224|ref|XP_002322504.1| predicted protein [Populus trichocarpa]
gi|222867134|gb|EEF04265.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/434 (74%), Positives = 379/434 (87%), Gaps = 2/434 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWR+D FSTLI++Y +GNFD CLNVYEEMKA+GVKPN++ YN LLD MG
Sbjct: 216 YD-RARTEKWRLDTTTFSTLIRIYKDSGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMG 274
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RA+RPWQ K Y+++ D+GLSP++ TYA+LLRAYGRARYGEDT+ +Y+EMKEK + L+V
Sbjct: 275 RARRPWQAKKFYQDIIDSGLSPSYATYAALLRAYGRARYGEDTIKIYKEMKEKELSLNVL 334
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNT+LAMCAD+G+ DEA EIFEDMK+S PDSWTFSSMIT+ SC GKVSEAE M NE
Sbjct: 335 LYNTILAMCADLGFVDEAIEIFEDMKNS-GISPDSWTFSSMITMSSCCGKVSEAENMLNE 393
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M EAGF+PN+FVLTSLIQCYGKAQR DDVV+ NRL EL ITPDDRFCGCLLNVMTQTP
Sbjct: 394 MFEAGFQPNIFVLTSLIQCYGKAQRIDDVVKTFNRLYELLITPDDRFCGCLLNVMTQTPN 453
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EELGKLV+CVE++N KLG+VVKLL+EEQ EG+FKKEA +LF++IS +VKKAYCNCLIDL
Sbjct: 454 EELGKLVDCVERANPKLGHVVKLLVEEQGNEGNFKKEAADLFDNISTEVKKAYCNCLIDL 513
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
CV LN+LE AC+LL+ GLTL +YTDIQS++ TQWSL+LKSLS GAALTALH+WINDLSKA
Sbjct: 514 CVKLNMLERACELLDHGLTLGIYTDIQSKTSTQWSLNLKSLSSGAALTALHVWINDLSKA 573
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
LE+GE+ PPLLGINTGHGKHKYS+KGLA+VFESHLKELNAPFH++PDKVGWFLTT+ AA+
Sbjct: 574 LEAGEQLPPLLGINTGHGKHKYSEKGLANVFESHLKELNAPFHEAPDKVGWFLTTKVAAE 633
Query: 515 SWLESRSSLVSVPA 528
SWLESR +V A
Sbjct: 634 SWLESRKLADAVAA 647
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 136/311 (43%), Gaps = 49/311 (15%)
Query: 41 LQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRAR 100
LQ +VSLQ+ + P + + + K GSS KSYIWVNPKS +AS L++ SYD R
Sbjct: 1 LQITNVSLQDQKI--PQQETSKDSNFNEKNGSSSKSYIWVNPKSSKASTLRKSSYDAR-- 56
Query: 101 NEKWRIDPNAFSTLIK----LYGTAGNFDGCLNVYEEM-------KAIGVKPNM------ 143
+++LIK L N D N+ E A+ + NM
Sbjct: 57 ----------YASLIKAAKSLNSCNPNKDDVFNILGEFGNKLFEHDAVVILNNMSNPDTA 106
Query: 144 -----------------ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ YN + + + + +V+ ++ EM + + P+ T+++++
Sbjct: 107 LLALKFFRERLEFNREVVVYNVTMKVLRKCRDLNKVEKLFDEMIERAVKPDNVTFSTIIS 166
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
+ + + +M G+ ++T++ VG ++A ++ D +E +
Sbjct: 167 CARLCNLADKAVEWFEKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLY-DRARTEKWR 225
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
D+ TFS++I I G ++ EM G +PNL + +L+ G+A+R +
Sbjct: 226 LDTTTFSTLIRIYKDSGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKF 285
Query: 307 LNRLPELGITP 317
+ + G++P
Sbjct: 286 YQDIIDSGLSP 296
>gi|9755842|emb|CAC01928.1| 67kD chloroplastic RNA-binding protein, P67 [Arabidopsis thaliana]
Length = 702
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/436 (73%), Positives = 378/436 (86%), Gaps = 3/436 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWRID FSTLI++YG +GN+DGCLN+YEEMKA+GVKPN++ YN L+D+MG
Sbjct: 268 YD-RARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMG 326
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQ K IYK++ NG +PNW+TYA+L+RAYGRARYG+D L++YREMKEKG+ L+V
Sbjct: 327 RAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVI 386
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLL+MCAD+GY DEAFEIF+DMK+ E C PDSWTFSS+IT+ +C G+VSEAEA +
Sbjct: 387 LYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQ 446
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M EAGFEP LFVLTS+IQCYGKA++ DDVVR +++ ELGITPDDRFCGCLLNVMTQTP
Sbjct: 447 MREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPS 506
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDI-EGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+GKL+ CVEK+ KLG VVK+L+EEQ+ EG FKKEA+EL +SI DVKKAY NCLID
Sbjct: 507 EEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLID 566
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
LCVNLN LE AC++L+LGL ++YT +QS+S TQWSLHLKSLSLGAALTALH+W+NDLS+
Sbjct: 567 LCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSE 626
Query: 454 -ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
ALESGEEFPPLLGINTGHGKHKYSDKGLA+VFESHLKELNAPFH++PDKVGWFLTT A
Sbjct: 627 AALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVA 686
Query: 513 AKSWLESRSSLVSVPA 528
AK+WLE R S V A
Sbjct: 687 AKAWLEFRRSAGGVSA 702
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 158/341 (46%), Gaps = 33/341 (9%)
Query: 10 CSLFST-PKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHG 68
C+L S PK R+F S+ + S F+S+ LQ VS+QE + + P
Sbjct: 21 CNLLSVYPKSTPRSFLSSYNPNSS-HFHSRNLLQATHVSVQEAIPQSEKSKLVDVDLPIP 79
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC- 127
+ +S KSY+WVNPKSPRAS+L+ KSYD+R +S+LIKL A + D C
Sbjct: 80 EPTAS-KSYVWVNPKSPRASQLRRKSYDSR------------YSSLIKL---AESLDACK 123
Query: 128 ---LNVYEEMKAIGVK----PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
+V + + G K ++T NN+ + P + + + M S
Sbjct: 124 PNEADVCDVITGFGGKLFEQDAVVTLNNMTNP---ETAPLVLNNLLETMKP---SREVIL 177
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y ++ + +++ E + ++ EM E+G++ + T+++ G A E FE M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM- 236
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
SS C+PD+ T ++MI G V A ++++ + + ++LI+ YG +
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
D + + LG+ P+ L++ M + + K++
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKII 337
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K++ + + + +++EM G+KP+ T+ ++ + P + +++M+
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T A+++ AYGRA + LS+Y + + ++ ++TL+ + G D
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
I+E+MK+ +P+ ++ +I + +A+ ++ +++ GF PN +L
Sbjct: 298 GCLNIYEEMKAL-GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 291 IQCYGKAQRTDDVVRALNRLPELGIT 316
++ YG+A+ DD + + E G++
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLS 382
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/428 (75%), Positives = 375/428 (87%), Gaps = 2/428 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR +WR+D AFSTLI++Y AGNFDGCLNVYEEMKA+GVKPN++ YN LLD MG
Sbjct: 269 YD-RARTGEWRLDATAFSTLIRIYKVAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMG 327
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQVK Y+++ DNGLSP++ TYA+LL AYGRARYGED +YREMKEKG+ L+V
Sbjct: 328 RAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVV 387
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYN++LAMCAD+G+ D+A EIFEDMKSS +PDSWTFSSMITI SC GKVSEAE NE
Sbjct: 388 LYNSILAMCADLGHVDKAVEIFEDMKSS-GIKPDSWTFSSMITIFSCCGKVSEAENTLNE 446
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M EAGF+PN+F+LTSLIQCYGKAQR DDVV NR+ EL ITPDDRFCGCLLNVMTQTP
Sbjct: 447 MFEAGFQPNIFILTSLIQCYGKAQRIDDVVNTFNRIFELVITPDDRFCGCLLNVMTQTPN 506
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EEL KLV+C E++N KLGYVVKLL+EEQD EG+FK EAT+LF+SIS +VKKAYCNCLIDL
Sbjct: 507 EELSKLVKCAERANPKLGYVVKLLVEEQDSEGNFKNEATDLFDSISTEVKKAYCNCLIDL 566
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
C+ LN+LE AC+LL+LGLTLE+YT+I SR+ TQWSL+LKSLS GAA+TALHIW+NDLSK
Sbjct: 567 CIKLNMLERACELLDLGLTLEIYTNIMSRTSTQWSLNLKSLSPGAAMTALHIWMNDLSKV 626
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
LE+GE+ PPLLGINTGHGKHKYS+KGLA+VFES+LKELN+PFH++PDKVGWFLTT+ AA+
Sbjct: 627 LEAGEQLPPLLGINTGHGKHKYSEKGLANVFESYLKELNSPFHEAPDKVGWFLTTKVAAE 686
Query: 515 SWLESRSS 522
SWLESR S
Sbjct: 687 SWLESRKS 694
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 52/359 (14%)
Query: 1 MASNLCYSTCSLF----STPKLGRRTFT--------FSFQRDDSLSFYSK-TSLQKRSVS 47
MA NLC S SL+ +TP R + + ++LS S+ TSLQ +VS
Sbjct: 1 MAYNLCSSPSSLYKPLCNTPSSSSRDSKSRNLNNNFYDSSKINTLSSQSRATSLQITNVS 60
Query: 48 LQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTR------ARN 101
LQ+ + P + + KTGSS KSYIWVNPKS RAS L++ SYD + A
Sbjct: 61 LQDEEL--PRQETSKDSNFKEKTGSSSKSYIWVNPKSSRASILRKSSYDAKYTSLVNAAK 118
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM------------------ 143
PN ++ FDG L E A+ + NM
Sbjct: 119 YLNSCSPNK----DDVFNVLSKFDGKL---LEQDAVVILNNMSNPDTALLALKFFQERLK 171
Query: 144 -----ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ YN L + + + + ++ EM + G+ P+ T+++++ + +
Sbjct: 172 FNREVVVYNVTLKVFRKGRDLDKAEKLFDEMLERGVKPDNFTFSTIISCARLCNLADKAV 231
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
+ +M G++ +T++ G ++A +++ ++ E + D+ FS++I I
Sbjct: 232 EWFEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGE-WRLDATAFSTLIRI 290
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G ++ EM G +PNL + L+ G+A+R V + + + G++P
Sbjct: 291 YKVAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSP 349
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Query: 68 GKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
GK I N +P + L K + R K+ + ++ +K++ + D
Sbjct: 139 GKLLEQDAVVILNNMSNPDTALLALKFFQERL---KFNREVVVYNVTLKVFRKGRDLDKA 195
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+++EM GVKP+ T++ ++ + +++M GL P+ T ++++ +
Sbjct: 196 EKLFDEMLERGVKPDNFTFSTIISCARLCNLADKAVEWFEKMPSFGLEPDDVTLSTMIDS 255
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
YGRA E LS+Y + +L T ++TL+ + G D ++E+MK+ +P
Sbjct: 256 YGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYKVAGNFDGCLNVYEEMKAL-GVKP 314
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ ++ ++ + + + + ++++ G P+ +L+ YG+A+ +D +
Sbjct: 315 NLVIYNILLDAMGRAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGEDAFKIY 374
Query: 308 NRLPELGI 315
+ E G+
Sbjct: 375 REMKEKGL 382
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ +AE +F+EMLE G +P+ F +++I C D V ++P G+ PDD
Sbjct: 192 LDKAEKLFDEMLERGVKPDNFTFSTIISCARLCNLADKAVEWFEKMPSFGLEPDD 246
>gi|240255936|ref|NP_193372.6| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|374095491|sp|Q8GWE0.3|PP314_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16390, chloroplastic; AltName: Full=Chloroplastic
RNA-binding protein P67; Flags: Precursor
gi|332658341|gb|AEE83741.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 702
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/436 (73%), Positives = 377/436 (86%), Gaps = 3/436 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWRID FSTLI++YG +GN+DGCLN+YEEMKA+GVKPN++ YN L+D+MG
Sbjct: 268 YD-RARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMG 326
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQ K IYK++ NG +PNW+TYA+L+RAYGRARYG+D L++YREMKEKG+ L+V
Sbjct: 327 RAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVI 386
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLL+MCAD Y DEAFEIF+DMK+ E C PDSWTFSS+IT+ +C G+VSEAEA +
Sbjct: 387 LYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQ 446
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M EAGFEP LFVLTS+IQCYGKA++ DDVVR +++ ELGITPDDRFCGCLLNVMTQTP
Sbjct: 447 MREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPS 506
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDI-EGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+GKL+ CVEK+ KLG VVK+L+EEQ+ EG FKKEA+EL +SI DVKKAY NCLID
Sbjct: 507 EEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLID 566
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
LCVNLN LE AC++L+LGL ++YT +QS+S TQWSLHLKSLSLGAALTALH+W+NDLS+
Sbjct: 567 LCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSE 626
Query: 454 -ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
ALESGEEFPPLLGINTGHGKHKYSDKGLA+VFESHLKELNAPFH++PDKVGWFLTT A
Sbjct: 627 AALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVA 686
Query: 513 AKSWLESRSSLVSVPA 528
AK+WLESR S V A
Sbjct: 687 AKAWLESRRSAGGVSA 702
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 158/341 (46%), Gaps = 33/341 (9%)
Query: 10 CSLFST-PKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHG 68
C+L S PK R+F S+ + S F+S+ LQ VS+QE + + P
Sbjct: 21 CNLLSVYPKSTPRSFLSSYNPNSS-HFHSRNLLQATHVSVQEAIPQSEKSKLVDVDLPIP 79
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC- 127
+ +S KSY+WVNPKSPRAS+L+ KSYD+R +S+LIKL A + D C
Sbjct: 80 EPTAS-KSYVWVNPKSPRASQLRRKSYDSR------------YSSLIKL---AESLDACK 123
Query: 128 ---LNVYEEMKAIGVK----PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
+V + + G K ++T NN+ + P + + + M S
Sbjct: 124 PNEADVCDVITGFGGKLFEQDAVVTLNNMTNP---ETAPLVLNNLLETMKP---SREVIL 177
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y ++ + +++ E + ++ EM E+G++ + T+++ G A E FE M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM- 236
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
SS C+PD+ T ++MI G V A ++++ + + ++LI+ YG +
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
D + + LG+ P+ L++ M + + K++
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKII 337
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K++ + + + +++EM G+KP+ T+ ++ + P + +++M+
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T A+++ AYGRA + LS+Y + + ++ ++TL+ + G D
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
I+E+MK+ +P+ ++ +I + +A+ ++ +++ GF PN +L
Sbjct: 298 GCLNIYEEMKAL-GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 291 IQCYGKAQRTDDVVRALNRLPELGIT 316
++ YG+A+ DD + + E G++
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLS 382
>gi|9755886|emb|CAC01940.1| 67kD chloroplastic RNA-binding protein, P67.1 [Raphanus sativus]
Length = 700
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/436 (72%), Positives = 374/436 (85%), Gaps = 3/436 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWRIDP FSTLI++YG AGN+DGCLN+YEEMK++GVKPN++ YN LLD+MG
Sbjct: 266 YD-RARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMG 324
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+AKRPWQ I+K++ NG PNW+TYA+L+RAYGRARYGED L +YR+MK KG++L+V
Sbjct: 325 KAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGLELTVI 384
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLL+MCAD+GY DEAFEIF+DMKSS C+PDSWTFSS+IT+ SC G+VSEAEA E
Sbjct: 385 LYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLITVYSCCGRVSEAEAALRE 444
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M EAGFEP LFVLTSLIQCYGKA++ DDVVR ++ ELGI PDDRFCGCLLNVMTQTP
Sbjct: 445 MREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQVLELGIEPDDRFCGCLLNVMTQTPT 504
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDI-EGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+GKL+ECVEK+ KLG VVK+L+EE++ EG KKEA+EL +SI DV KAY NCLID
Sbjct: 505 EEIGKLIECVEKAKPKLGRVVKMLVEEENCEEGVLKKEASELIDSIGSDVNKAYLNCLID 564
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
LCVNLN LE AC++L+LGL ++Y+ +QS+S TQWSLHLKSLSLGAALTALH+W+NDLS+
Sbjct: 565 LCVNLNKLEKACEILQLGLEYDIYSGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSE 624
Query: 454 -ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
AL SGEEFPPLLGINTGHGKHKYSDKGLA+VFESHLKELNAPFH++PDKVGWFLTT A
Sbjct: 625 AALTSGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVA 684
Query: 513 AKSWLESRSSLVSVPA 528
AK+WLESR S V A
Sbjct: 685 AKTWLESRRSSAEVSA 700
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 30/335 (8%)
Query: 7 YSTCSLFSTP-KLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQY 65
Y C+L S K R+F S+ +S F+S+T LQ VSLQE + P+
Sbjct: 17 YPLCNLLSVHHKSTPRSFVSSYN-PNSPPFHSRTLLQTSHVSLQEPLPQE--TQIEKPEL 73
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
S K Y WVNPKSPRAS+L+ KSYD+R +S+L+KL A + D
Sbjct: 74 EANPPASGSKRYAWVNPKSPRASQLRRKSYDSR------------YSSLVKL---AESLD 118
Query: 126 GC----LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT- 180
C +V + + G K + + + T+ P + + + L P
Sbjct: 119 SCPANEADVSDVIAKFGSK---LFEQDAVVTLNNMTNPETAPLVLNNLLET-LKPTREVI 174
Query: 181 -YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
Y ++ + +++ E + ++ EM ++G++ + TL++ G A E FE M
Sbjct: 175 LYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPKRAVEWFEKM 234
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
S +PD+ T ++MI G V A ++++ + + ++LI+ YG A
Sbjct: 235 PSF-GLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGN 293
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
D + + LG+ P+ LL+ M + +
Sbjct: 294 YDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKR 328
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 103/205 (50%), Gaps = 1/205 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K++ + + + +++EM GVKP+ T+ L+ + P + +++M
Sbjct: 176 YNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPKRAVEWFEKMP 235
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL P+ T A+++ AYGRA E LS+Y + + ++ ++TL+ + G D
Sbjct: 236 SFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYD 295
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
I+E+MKS +P+ ++ ++ + +A + +++ GFEPN +L
Sbjct: 296 GCLNIYEEMKSL-GVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAAL 354
Query: 291 IQCYGKAQRTDDVVRALNRLPELGI 315
I+ YG+A+ +D + ++ G+
Sbjct: 355 IRAYGRARYGEDALVIYRQMKGKGL 379
>gi|2244996|emb|CAB10416.1| salt-inducible protein homolog [Arabidopsis thaliana]
gi|7268388|emb|CAB78681.1| salt-inducible protein homolog [Arabidopsis thaliana]
Length = 777
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/436 (72%), Positives = 377/436 (86%), Gaps = 3/436 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWRID FSTLI++YG +GN+DGCLN+YEEMKA+GVKPN++ YN L+D+MG
Sbjct: 343 YD-RARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMG 401
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQ K IYK++ NG +PNW+TYA+L+RAYGRARYG+D L++YREMKEKG+ L+V
Sbjct: 402 RAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVI 461
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLL+MCAD + DEAFEIF+DMK+ E C PDSWTFSS+IT+ +C G+VS+AEA +
Sbjct: 462 LYNTLLSMCADNRHVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSKAEAALLQ 521
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ EAGFEP LFVLTS+IQCYGKA++ DDVVR +++ ELGITPDDRFCGCLLNVMTQTP
Sbjct: 522 IREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPS 581
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDI-EGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+GKL+ CVEK+ KLG VVK+L+EEQ+ EG FKKEA+EL +SI DVKKAY NCLID
Sbjct: 582 EEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLID 641
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
LCVNLN LE AC++L+LGL ++YT +QS+S TQWSLHLKSLSLGAALTALH+W+NDLS+
Sbjct: 642 LCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSE 701
Query: 454 -ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
ALESGEEFPPLLGINTGHGKHKYSDKGLA+VFESHLKELNAPFH++PDKVGWFLTT A
Sbjct: 702 AALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVA 761
Query: 513 AKSWLESRSSLVSVPA 528
AK+WLESR S V A
Sbjct: 762 AKAWLESRRSAGGVSA 777
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 31/315 (9%)
Query: 35 FYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKS 94
F+S+ LQ VS+QE + + P + +S KSY+WVNPKSPRAS+L+ KS
Sbjct: 121 FHSRNLLQATHVSVQEAIPQSEKSKLVDVDLPIPEPTAS-KSYVWVNPKSPRASQLRRKS 179
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC----LNVYEEMKAIGVK----PNMITY 146
YD+R +S+LIKL A + D C +V + + G K ++T
Sbjct: 180 YDSR------------YSSLIKL---AESLDACKPNEADVCDVITGFGGKLFEQDAVVTL 224
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
NN+ + P + + + M S Y ++ + +++ E + ++ EM E
Sbjct: 225 NNMTNP---ETAPLVLNNLLETMKP---SREVILYNVTMKVFRKSKDLEKSEKLFDEMLE 278
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+G++ + T+++ G A E FE M SS C+PD+ T ++MI G V
Sbjct: 279 RGIKPDNATFTTIISCARQNGVPKRAVEWFEKM-SSFGCEPDNVTMAAMIDAYGRAGNVD 337
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
A ++++ + + ++LI+ YG + D + + LG+ P+ L+
Sbjct: 338 MALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLI 397
Query: 327 NVMTQTPKEELGKLV 341
+ M + + K++
Sbjct: 398 DSMGRAKRPWQAKII 412
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K++ + + + +++EM G+KP+ T+ ++ + P + +++M+
Sbjct: 253 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 312
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T A+++ AYGRA + LS+Y + + ++ ++TL+ + G D
Sbjct: 313 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 372
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
I+E+MK+ +P+ ++ +I + +A+ ++ +++ GF PN +L
Sbjct: 373 GCLNIYEEMKAL-GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 431
Query: 291 IQCYGKAQRTDDVVRALNRLPELGIT 316
++ YG+A+ DD + + E G++
Sbjct: 432 VRAYGRARYGDDALAIYREMKEKGLS 457
>gi|9755888|emb|CAC01941.1| RSP67.2 [Raphanus sativus]
Length = 700
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/436 (72%), Positives = 373/436 (85%), Gaps = 3/436 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWRIDP FSTLI++YG AGN+DGCLN+YEEMK++GVKPN++ YN LLD+MG
Sbjct: 266 YD-RARTEKWRIDPVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMG 324
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+AKRPWQ I+K++ NG PNW+TYA+L+RAYGRARYGED L +YR+MK KGM+L+V
Sbjct: 325 KAKRPWQATMIHKDLISNGFEPNWSTYAALIRAYGRARYGEDALVIYRQMKGKGMELTVL 384
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLL+MCAD+GY DEAFEIF+DMKSS C+PDSWTFSS+IT+ SC G+VSEAEA E
Sbjct: 385 LYNTLLSMCADIGYVDEAFEIFQDMKSSGTCEPDSWTFSSLITVYSCCGRVSEAEAALRE 444
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M EAGFEP LFVLTSLIQCYGKA++ DDVVR ++ ELGI PDDRFCGCLLNVMTQTPK
Sbjct: 445 MREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQVLELGIEPDDRFCGCLLNVMTQTPK 504
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDI-EGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+GKL+ CVEK+ KLG V K+L+EE++ EG KKEA+EL +SI DV KAY NCLID
Sbjct: 505 EEIGKLIGCVEKAKPKLGRVEKMLVEEENCEEGVLKKEASELIDSIGSDVNKAYLNCLID 564
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
LCVNLN LE AC++L+LGL ++Y+ +QS+S TQWSLHLKSLSLGAALTALH+W+NDLS+
Sbjct: 565 LCVNLNKLEKACEILQLGLEYDIYSGLQSKSDTQWSLHLKSLSLGAALTALHVWMNDLSE 624
Query: 454 -ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
AL SGEEFPPLLGINTGHGKHKYSDKGLA+VFESHLKELNAPFH++PDKVGWFLTT A
Sbjct: 625 AALTSGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVA 684
Query: 513 AKSWLESRSSLVSVPA 528
AK+WLESR S V A
Sbjct: 685 AKTWLESRRSSAEVSA 700
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 40/351 (11%)
Query: 1 MASNLCYSTCSLFSTP-----------KLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQ 49
M+ +LC S SL P K R+F S+ +S F+S+T LQ R VSLQ
Sbjct: 1 MSFHLCSSPSSLLHDPYPLCNLLSVHHKSTPRSFVSSYN-PNSPPFHSRTLLQTRHVSLQ 59
Query: 50 ETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN 109
E + P+ S K Y WVNPKSPRAS+L+ KSYD+R
Sbjct: 60 EPLPQE--TQIEKPELDANPPASGSKRYAWVNPKSPRASQLRRKSYDSR----------- 106
Query: 110 AFSTLIKLYGTAGNFDGC----LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+S+L+KL A + D C +V + + G K + + + + P +
Sbjct: 107 -YSSLVKL---AESLDSCPPNEADVSDVIAKFGSK---LFEQDAVVALNNMTNPETAPLV 159
Query: 166 YKEMTDNGLSPNWNT--YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ + L P Y ++ + +++ E + ++ EM ++G++ + TL++
Sbjct: 160 LNNLLET-LKPTREVILYNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCA 218
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + A E FE M S +PD+ T ++MI G V A ++++ + +
Sbjct: 219 RQCGLPNRAVEWFEKMPSF-GLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRID 277
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
++LI+ YG A D + + LG+ P+ LL+ M + +
Sbjct: 278 PVTFSTLIRIYGYAGNYDGCLNIYEEMKSLGVKPNLVIYNRLLDSMGKAKR 328
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 99/194 (51%), Gaps = 1/194 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K++ + + + +++EM GVKP+ T+ L+ + P + +++M
Sbjct: 176 YNVTMKVFRKSKDLEKSEKLFDEMLQRGVKPDNATFTTLISCARQCGLPNRAVEWFEKMP 235
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL P+ T A+++ AYGRA E LS+Y + + ++ ++TL+ + G D
Sbjct: 236 SFGLEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDPVTFSTLIRIYGYAGNYD 295
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
I+E+MKS +P+ ++ ++ + +A + +++ GFEPN +L
Sbjct: 296 GCLNIYEEMKSL-GVKPNLVIYNRLLDSMGKAKRPWQATMIHKDLISNGFEPNWSTYAAL 354
Query: 291 IQCYGKAQRTDDVV 304
I+ YG+A+ +D +
Sbjct: 355 IRAYGRARYGEDAL 368
>gi|297804554|ref|XP_002870161.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
gi|297315997|gb|EFH46420.1| hypothetical protein ARALYDRAFT_915114 [Arabidopsis lyrata subsp.
lyrata]
Length = 702
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/436 (72%), Positives = 374/436 (85%), Gaps = 3/436 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWRID FSTLI++YG +GN+DGCLN+YEEMKA+GVKPN++ YN LLD+MG
Sbjct: 268 YD-RARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLLDSMG 326
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQ K I+K++ NG +PNW+TYA+L+RAYGRARYG+D L +YREMKEKG+ L+V
Sbjct: 327 RAKRPWQAKIIHKDLISNGFTPNWSTYAALIRAYGRARYGDDALVIYREMKEKGLSLTVI 386
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLL+MCAD+GY DEAFEIF+DMK+ E C PDSWTFSS+IT+ SC G+VSEAEA +
Sbjct: 387 LYNTLLSMCADIGYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYSCSGRVSEAEAALLQ 446
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M EAGFEP LFVLTS+IQCYGKA++ DDVVR +++ ELGITPDDRFCGCLLNVMTQTP
Sbjct: 447 MREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPS 506
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQD-IEGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+GKL+ CVEK+ + VK+L+EEQ+ EG FKKE +EL +SI DVKKAY NCLID
Sbjct: 507 EEIGKLIGCVEKAKPQNIGQVKMLVEEQNGEEGVFKKETSELIDSIGSDVKKAYLNCLID 566
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
LCVNLN LE AC++L+LGL ++YT +QS+S TQWSLHLKSLSLGAALTALH+WINDLS+
Sbjct: 567 LCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWINDLSE 626
Query: 454 -ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
ALESGEEFPPLLGINTGHGKHKYSDKGLA+VFESHLKELNAPFH++PDKVGWFLTT A
Sbjct: 627 AALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVA 686
Query: 513 AKSWLESRSSLVSVPA 528
AK+WLESR S V A
Sbjct: 687 AKAWLESRRSSGGVSA 702
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 29/340 (8%)
Query: 10 CSLFST-PKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHG 68
C+L S PK R+F S+ + S F+S+ LQ VS+QE + + P
Sbjct: 21 CNLLSVYPKSTPRSFLCSYNPNSS-PFHSRNLLQVTHVSVQEAIPQSEKSKLDDADLPLP 79
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC- 127
+S KSY+WVNPKSPRAS+L+ KSYD+R +S+LIKL A + D C
Sbjct: 80 DPPAS-KSYVWVNPKSPRASQLRRKSYDSR------------YSSLIKL---AESLDSCK 123
Query: 128 ---LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT--YA 182
+V + + G K + + + T+ P + + + + P+ Y
Sbjct: 124 PNEADVCDVITGFGGK---LFEQDAVVTLNNMTNPETAPIVLNNLLET-MKPSREVILYN 179
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
L+ + +++ E + ++ EM E+G++ + T+++ G A E FE M SS
Sbjct: 180 VTLKVFRKSKNLEKSEKLFDEMLERGVKPDNATFTTIISCARQSGVPKRAVEWFEKM-SS 238
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
C+PD+ T ++MI G V A ++++ + + ++LI+ YG + D
Sbjct: 239 FGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
+ + LG+ P+ LL+ M + + K++
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLLDSMGRAKRPWQAKIIH 338
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K++ + N + +++EM GVKP+ T+ ++ ++ P + +++M+
Sbjct: 178 YNVTLKVFRKSKNLEKSEKLFDEMLERGVKPDNATFTTIISCARQSGVPKRAVEWFEKMS 237
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T A+++ AYGRA E LS+Y + + ++ ++TL+ + G D
Sbjct: 238 SFGCEPDNVTLAAMIDAYGRAGNVEMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
I+E+MK+ +P+ ++ ++ + +A+ + +++ GF PN +L
Sbjct: 298 GCLNIYEEMKAL-GVKPNLVIYNRLLDSMGRAKRPWQAKIIHKDLISNGFTPNWSTYAAL 356
Query: 291 IQCYGKAQRTDDVVRALNRLPELGIT 316
I+ YG+A+ DD + + E G++
Sbjct: 357 IRAYGRARYGDDALVIYREMKEKGLS 382
>gi|356562139|ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 689
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/427 (74%), Positives = 370/427 (86%), Gaps = 2/427 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWR+D FSTLIK+YG AGN+DGCLNVY+EMKA+GVK NM+ YN LLD MG
Sbjct: 259 YD-RARTEKWRLDSVTFSTLIKMYGLAGNYDGCLNVYQEMKALGVKSNMVIYNTLLDAMG 317
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQ K+IY EMT+NG PNW TYASLLRAYGR RY ED L VY+EMKEKGM+++
Sbjct: 318 RAKRPWQAKSIYTEMTNNGFLPNWATYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTH 377
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLLAMCAD+G D+AF+IFEDMKSS C DSWTFSS+ITI SC G VSEAE M NE
Sbjct: 378 LYNTLLAMCADLGLADDAFKIFEDMKSSATCLCDSWTFSSLITIYSCSGNVSEAERMLNE 437
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+E+GF+P +FVLTSL+QCYGK RTDDV++ N+L +LGI+PDDRFCGCLLNVMTQTPK
Sbjct: 438 MIESGFQPTIFVLTSLVQCYGKVGRTDDVLKTFNQLLDLGISPDDRFCGCLLNVMTQTPK 497
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEE-QDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
EELGKL +CVEK+N KLG V++ L+E ++ +G+F+KEA+ELFNSI+ +VKK +CN LID
Sbjct: 498 EELGKLNDCVEKANPKLGSVLRYLVEGLEEGDGEFRKEASELFNSIADEVKKPFCNSLID 557
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
LCVNLNLL+ AC+LL+LGLTLE+YTDIQS+S TQWSLHLKSLSLGA+LTALH WINDLSK
Sbjct: 558 LCVNLNLLDKACELLDLGLTLEIYTDIQSKSQTQWSLHLKSLSLGASLTALHAWINDLSK 617
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAA 513
LESGE+ PPLLGINTGHGKH+YSDKGLA+V ESHL ELNAPFH++PDK GWFLTT+ AA
Sbjct: 618 TLESGEDLPPLLGINTGHGKHRYSDKGLANVVESHLNELNAPFHEAPDKAGWFLTTQVAA 677
Query: 514 KSWLESR 520
KSWLESR
Sbjct: 678 KSWLESR 684
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 161/394 (40%), Gaps = 79/394 (20%)
Query: 1 MASNLCYSTCSLF-----------STPKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQ 49
MA NLC S SLF S K R + FQ S + +SKT L VSL
Sbjct: 1 MAYNLCSSPSSLFHDLPSISSSSSSCRKFKLRNSSSFFQPSPSPTPHSKTLLH---VSLH 57
Query: 50 ETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTR----------- 98
E + H+ + SS +YIWVNP+SPRA +L+ +SYD R
Sbjct: 58 EPIPEHLPPHAN-------SSSSSKSNYIWVNPRSPRAKQLERRSYDARYTSLVNLALSL 110
Query: 99 ------------ARNEKW------------------RIDP---NAFSTLIKLYGTAGNFD 125
+ W R+ P N F I+ ++
Sbjct: 111 DSCNPSQEDVSLVLKDLWGRVIEQDAVIVINNMSNPRVVPFVLNYFQRRIRPTREVILYN 170
Query: 126 GCLNVYEEMKAI-------------GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
L V+ + K + GV+P+ ++++ ++ P + +++M
Sbjct: 171 VTLKVFRKSKDLDAMEKLFDEMLQRGVRPDNVSFSTIISCARICSLPNKAVEWFEKMPSF 230
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
P+ TY++++ AYGRA + L +Y + + +L ++TL+ M G D
Sbjct: 231 RCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDSVTFSTLIKMYGLAGNYDGC 290
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
++++MK+ + + +++++ + +A++++ EM GF PN SL++
Sbjct: 291 LNVYQEMKAL-GVKSNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFLPNWATYASLLR 349
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+ + ++D + + E G+ + LL
Sbjct: 350 AYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLL 383
>gi|357480587|ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511634|gb|AES92776.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 706
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/428 (72%), Positives = 368/428 (85%), Gaps = 1/428 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWRI+P FSTLIK+YG AGN+DGCLNVYEEMKA+GVKPN++ YN LLD MG
Sbjct: 274 YD-RARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMG 332
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQ +TIYKEM +N + PN TYASLL AYGRAR+ ED L VYREM+EK M L+
Sbjct: 333 RAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTH 392
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYN+LLAMCADVGYTD AFEIFEDMKSS+ C PDSWTFSS+ITI SC G+VSEAE M NE
Sbjct: 393 LYNSLLAMCADVGYTDLAFEIFEDMKSSDTCSPDSWTFSSLITIYSCSGRVSEAERMMNE 452
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+E+GFEP +FVLTSL+QCYGKA+RTDDVV+ N+L ++GI PDDRFCGCLLNVMTQTPK
Sbjct: 453 MIESGFEPTIFVLTSLVQCYGKAKRTDDVVKTFNQLLDMGIEPDDRFCGCLLNVMTQTPK 512
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EELGKL++CVEK+N KL +VV+ L+E + +G+F+KEA ELF+SI+ VK+A+CN LIDL
Sbjct: 513 EELGKLIDCVEKANPKLSFVVRYLVEGLEGDGEFRKEALELFSSITDGVKRAFCNSLIDL 572
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
C+NL+LL+ A LL+LGLTLE+YTDIQSRS TQWSL L+ LS+GA+LTA H+WINDLSKA
Sbjct: 573 CINLDLLDRARVLLDLGLTLEIYTDIQSRSQTQWSLILRGLSVGASLTAFHVWINDLSKA 632
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
ESGE+ PPLLGI+TGHGKH+YSDKGLA V ESH+KEL+APF +SPDK GWFLTT+ A K
Sbjct: 633 FESGEDLPPLLGIHTGHGKHRYSDKGLAGVIESHMKELDAPFRESPDKAGWFLTTQVAVK 692
Query: 515 SWLESRSS 522
SW+ESR S
Sbjct: 693 SWMESRGS 700
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 140/303 (46%), Gaps = 32/303 (10%)
Query: 40 SLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRA 99
SLQ+ S+ Q+ Q +N K ++ P G + SS SYIWVNPKSPRA +L +KSYD R
Sbjct: 58 SLQE-SIPQQQPQDANSQKDAKFDN-PIGNSTSSKSSYIWVNPKSPRAKQLGKKSYDAR- 114
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGC----LNVYEEMKAIGVK----PNMITYNNLLD 151
+S+L+KL + D C +V + +K +G K +I NN+ +
Sbjct: 115 -----------YSSLVKL---SNALDSCEPTEHDVSQILKCLGDKVIEQDAVIIINNMEN 160
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
++ P+ ++ + ++ + Y L+ + + + + V+ EM ++G++
Sbjct: 161 SV---VVPFVLQYVQRKSIP---TREVILYNVTLKVFRKCKDLDGAEKVFGEMLQRGVKP 214
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++T+++ D+A E FE M C+PD T+S MI G + A +
Sbjct: 215 DNVTFSTIISCARSCYLPDKAVEWFEKMPLF-GCEPDDVTYSVMIDSYGKAGDIDMALNL 273
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++ + ++LI+ YG A D + + LG+ P+ LL+ M +
Sbjct: 274 YDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGR 333
Query: 332 TPK 334
+
Sbjct: 334 AKR 336
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K++ + DG V+ EM GVKP+ +T++ ++ P + +++M
Sbjct: 184 YNVTLKVFRKCKDLDGAEKVFGEMLQRGVKPDNVTFSTIISCARSCYLPDKAVEWFEKMP 243
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ TY+ ++ +YG+A + L++Y + + ++ ++TL+ M G D
Sbjct: 244 LFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYD 303
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
++E+MK+ +P+ +++++ + +A ++ EM+ PN SL
Sbjct: 304 GCLNVYEEMKAL-GVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRATYASL 362
Query: 291 IQCYGKAQRTDDVVRALNRLPE 312
+ YG+A+ +D + + E
Sbjct: 363 LHAYGRARFCEDALVVYREMRE 384
>gi|356522073|ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 685
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/427 (74%), Positives = 368/427 (86%), Gaps = 2/427 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKWR+D FSTLIK+YG AGN+DGCLNVY+EMK +GVKPNM+ YN LLD MG
Sbjct: 255 YD-RARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMG 313
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQ K+IY EMT+NG SPNW TYASLLRAYGR RY ED L VY+EMKEKGM+++
Sbjct: 314 RAKRPWQAKSIYTEMTNNGFSPNWVTYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTH 373
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYNTLLAMCAD+G +EAFEIFEDMK+S C DSWTFSS+ITI SC G VSEAE M NE
Sbjct: 374 LYNTLLAMCADLGLANEAFEIFEDMKTSATCLCDSWTFSSLITIYSCTGNVSEAERMLNE 433
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+E+G +P +FVLTSL+QCYGK RTDDVV+ N+L +LGI+PDDRFCGCLLNVMTQTPK
Sbjct: 434 MIESGSQPTIFVLTSLVQCYGKVGRTDDVVKTFNQLLDLGISPDDRFCGCLLNVMTQTPK 493
Query: 335 EELGKLVECVEKSNSKLGYVVK-LLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
EELGKL +CV+K+N KLG VV+ L+ ++ G+FKKEA+ELFNSI+ +VKK +CN LID
Sbjct: 494 EELGKLNDCVKKANPKLGSVVRYLVEGLEEGGGEFKKEASELFNSIADEVKKPFCNSLID 553
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
LCVNLNLL+ AC+LL+LGLTLE+YTD+QS+S TQWSLHLKSLSLGA+LTALH WINDLSK
Sbjct: 554 LCVNLNLLDKACELLDLGLTLEIYTDVQSKSQTQWSLHLKSLSLGASLTALHAWINDLSK 613
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAA 513
LESGE+ PPLLGINTGHGKH+YSDKGLASV ESHL ELNAPFH++PDK GWFLTT+ AA
Sbjct: 614 TLESGEDLPPLLGINTGHGKHRYSDKGLASVVESHLNELNAPFHEAPDKAGWFLTTQVAA 673
Query: 514 KSWLESR 520
KSWLESR
Sbjct: 674 KSWLESR 680
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 111/226 (49%), Gaps = 5/226 (2%)
Query: 105 RIDPN----AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
RI P ++ +K++ + + D +++EM GV+P+ +T++ ++ P
Sbjct: 155 RIRPTREVILYNVTLKVFRKSKDLDAMEKLFDEMLQRGVRPDNVTFSTIISCARICSLPN 214
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +++M+ G P+ TY++++ AYGRA + L +Y + + +L ++TL+
Sbjct: 215 KAVEWFEKMSSFGCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLI 274
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
M G D ++++MK +P+ +++++ + +A++++ EM GF
Sbjct: 275 KMYGLAGNYDGCLNVYQEMKVL-GVKPNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGF 333
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
PN SL++ YG+ + ++D + + E G+ + LL
Sbjct: 334 SPNWVTYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLL 379
>gi|224089793|ref|XP_002308814.1| predicted protein [Populus trichocarpa]
gi|222854790|gb|EEE92337.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/434 (69%), Positives = 354/434 (81%), Gaps = 21/434 (4%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR +WR+D FSTLI++Y A NFDGCLN YEEMKA+GVKPN++ Y LLD MG
Sbjct: 223 YD-RARTGEWRLDATPFSTLIRIYKVARNFDGCLNFYEEMKALGVKPNLVIYKILLDDMG 281
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKRPWQVK Y+++ DNGLSP++ TYA+LL AYGRARYG+D +YREMKEKG +
Sbjct: 282 RAKRPWQVKKFYQDIIDNGLSPSFVTYAALLHAYGRARYGDDAFKIYREMKEKGFGI--- 338
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
E+ EIFEDMKSS +PDSWTFSSMITI SC GKVSEAE NE
Sbjct: 339 ----------------ESVEIFEDMKSS-GIKPDSWTFSSMITIFSCCGKVSEAENTLNE 381
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M EAGF+PN+F+LTSLIQCYGKAQR DDVV+ NR+ + ITPDDRFCGCLLNVMTQTP
Sbjct: 382 MFEAGFQPNIFILTSLIQCYGKAQRIDDVVKTFNRIFDWVITPDDRFCGCLLNVMTQTPN 441
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EEL KLV+CVE++N KLGYVVKLL+EEQD EG+FK EAT+LF+SIS +VKKAYCNCLIDL
Sbjct: 442 EELSKLVKCVERANPKLGYVVKLLVEEQDSEGNFKNEATDLFDSISTEVKKAYCNCLIDL 501
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
C+ LN+LE + +LL+LGLTLE+YT+I SR+ TQWSL+LKSLS GAALTALHIW+NDLSK
Sbjct: 502 CIKLNMLERSWELLDLGLTLEIYTNIMSRTSTQWSLNLKSLSPGAALTALHIWMNDLSKV 561
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
LE+GE+ PPLLG+NTGHGK KYS+KGLA+V ES+LKELN+PFH++PDKVGWFLTT+ AA+
Sbjct: 562 LEAGEQLPPLLGMNTGHGKRKYSEKGLANVLESYLKELNSPFHEAPDKVGWFLTTKVAAE 621
Query: 515 SWLESRSSLVSVPA 528
SWLESR S +V A
Sbjct: 622 SWLESRKSTDAVAA 635
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ +AE +F+EMLE G +P+ F +++I C D V ++P G+ PDD
Sbjct: 146 LDKAEKLFDEMLERGVKPDNFTFSTIISCARLCNLADKAVEWFEKMPSFGLEPDD 200
>gi|356532363|ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 693
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 295/431 (68%), Positives = 347/431 (80%), Gaps = 6/431 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA+ EKWR+D AFS LIK+ G NFDGCL+VY +MK +G KPNM+TYN LL MGRAK
Sbjct: 252 RAKAEKWRVDTAAFSALIKMCGMLENFDGCLSVYNDMKVLGAKPNMVTYNALLYAMGRAK 311
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R K IY+EM NG SPNW T+A+LL+AY +AR+ ED L VY+EMK GM ++ LYN
Sbjct: 312 RALDAKAIYEEMISNGFSPNWPTHAALLQAYCKARFPEDALGVYKEMKGNGMDITADLYN 371
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
LLAMCADVGYTD A EIF +MKSS CQPDSWTFSSMIT+ S GKVSEAE M NEM++
Sbjct: 372 KLLAMCADVGYTDRASEIFYEMKSSGTCQPDSWTFSSMITMYSRSGKVSEAEGMLNEMIQ 431
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
+GF+P +FV+TSLI CYGKA+RTDDVV+ +L +LGI P+D FC LLNV+TQTPKEEL
Sbjct: 432 SGFQPTIFVMTSLICCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCSLLNVLTQTPKEEL 491
Query: 338 GKLVECVEKSNSKLGYVVKLLLEEQDIEGD--FKKEATELFNSISKDVKKAYCNCLIDLC 395
GKL +C+EK+N+KLG VV+ L+EE +EGD F+KEA EL NSI +VKK CNCLIDLC
Sbjct: 492 GKLTDCIEKANTKLGTVVRYLMEE--LEGDEAFRKEALELLNSIDAEVKKPLCNCLIDLC 549
Query: 396 VNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKAL 455
V LN+ E A LL+LGL LE+YT+IQ +S TQWSLHLK LS+GAA+TALH+WIN+LSKAL
Sbjct: 550 VKLNVPERARDLLDLGLMLEIYTNIQFKSQTQWSLHLKELSVGAAMTALHVWINELSKAL 609
Query: 456 ESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
ESGE+ PPLLGINTG GKHKYSDKGLASVFESHLKELNAPFH+S K GWFL T+AAAKS
Sbjct: 610 ESGEDLPPLLGINTGQGKHKYSDKGLASVFESHLKELNAPFHES--KAGWFLVTKAAAKS 667
Query: 516 WLESRSSLVSV 526
WLESR S S+
Sbjct: 668 WLESRDSTESI 678
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 138/342 (40%), Gaps = 58/342 (16%)
Query: 36 YSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSY 95
+SKT L S Q N + + P K+ S K WVNP+SPRA +L++ S
Sbjct: 31 HSKTLLHAPRFSFQPF---NTLQDAAKLDDPDAKSPSLSKKSFWVNPRSPRAKQLQQNSP 87
Query: 96 DTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC----------LNV----YEEMKAIGV-- 139
R+ S+L KL A + D C LNV E A+ +
Sbjct: 88 HARS------------SSLTKL---AKSLDSCNPTEEHVSEILNVLGNNVAERDAVFILN 132
Query: 140 ---KPN------------------MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW 178
PN ++ YN L + K + ++ EM G+ PN
Sbjct: 133 TMANPNTALLALKYFQQKISPGKHVVLYNVTLKVLREVKDFEGSEKLFDEMLQRGVEPNL 192
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
T+++++ + + + + +M G++ ++ + ++ A G D A +++
Sbjct: 193 ITFSTIISSASVCSLPDKAMEWFEKMPSFGVEPDASVASFMIHAYAHSGNADMALKLYGR 252
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
K +E + D+ FS++I +C +++N+M G +PN+ +L+ G+A+
Sbjct: 253 AK-AEKWRVDTAAFSALIKMCGMLENFDGCLSVYNDMKVLGAKPNMVTYNALLYAMGRAK 311
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT--PKEELG 338
R D + G +P+ LL + P++ LG
Sbjct: 312 RALDAKAIYEEMISNGFSPNWPTHAALLQAYCKARFPEDALG 353
>gi|356532365|ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 705
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 281/425 (66%), Positives = 344/425 (80%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA+ EKW +D + FSTLIK+YG GN+ CL ++ EMK +GVKP ++TYN LL ++ R+K
Sbjct: 259 RAKAEKWSLDASTFSTLIKMYGVLGNYVECLRIFGEMKVLGVKPTVVTYNTLLGSLFRSK 318
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ WQ K +YKEM NG+SP++ TYA+LLR Y A+Y ED LSVY+EMK GM ++V LYN
Sbjct: 319 KSWQAKNVYKEMISNGVSPDFITYATLLRIYAGAQYREDALSVYKEMKGNGMDMTVDLYN 378
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
LL MCADVG +EA EIFEDMKSS CQPDS TFSS+IT+ SC GKVSEAE M NEM++
Sbjct: 379 RLLDMCADVGCIEEAVEIFEDMKSSGTCQPDSLTFSSLITVYSCNGKVSEAEGMLNEMIQ 438
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
+GF+P ++VLTSL+QCYG+A++TDDVV+ +L +LGI PD FC CLLNVMTQTPKEE
Sbjct: 439 SGFQPTIYVLTSLVQCYGRAKQTDDVVKIFKQLLDLGIVPDVYFCCCLLNVMTQTPKEEF 498
Query: 338 GKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
GKL +C+EK+N++LG VV+ L+E Q+ +GDF+KEA+EL NSI VKK CNCLIDLCV+
Sbjct: 499 GKLTDCIEKANTRLGSVVRYLVEGQEGDGDFRKEASELLNSIDFKVKKPLCNCLIDLCVS 558
Query: 398 LNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALES 457
LN A +L+LGL LE+Y +IQSRS TQWSLHLK LS+GAA+TALH+WINDLSKALES
Sbjct: 559 LNAPNRARDVLDLGLMLEIYKNIQSRSETQWSLHLKKLSVGAAITALHVWINDLSKALES 618
Query: 458 GEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWL 517
E+ PPLLG+NTG GKHKYSDKGLASVFESHL+ELNAPFH +PDK GWFL T+ AAKSWL
Sbjct: 619 WEDLPPLLGVNTGQGKHKYSDKGLASVFESHLRELNAPFHQAPDKAGWFLVTKEAAKSWL 678
Query: 518 ESRSS 522
ESR S
Sbjct: 679 ESRGS 683
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +K + + +F+G +++EM GVKP+ IT++ L+++ P + +K+M
Sbjct: 167 YNATLKAFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLINSARMCALPDKAVEWFKKMP 226
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T ++++ AY + + LS+Y K + L + ++TL+ M +G
Sbjct: 227 SFGCEPDAMTCSAMVSAYAQTNNVDMALSLYGRAKAEKWSLDASTFSTLIKMYGVLGNYV 286
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E IF +MK +P T+++++ K +A+ ++ EM+ G P+ +L
Sbjct: 287 ECLRIFGEMKVL-GVKPTVVTYNTLLGSLFRSKKSWQAKNVYKEMISNGVSPDFITYATL 345
Query: 291 IQCYGKAQRTDDVVRALNRLPELGI 315
++ Y AQ +D + + G+
Sbjct: 346 LRIYAGAQYREDALSVYKEMKGNGM 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 148/352 (42%), Gaps = 24/352 (6%)
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
P + S K+ IWVNP SPRA L+ KS R +S L +L + +
Sbjct: 63 PDANSLSLSKTRIWVNPNSPRAKHLQPKSPSAR------------YSYLARL---TESLN 107
Query: 126 GCLNVYEEMKAI--GVKPNMITYNN--LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
C + + I G++ N+ + +LD M + V +++ Y
Sbjct: 108 SCTPSAQHVSTILKGLRDNVSERDAVFILDKMTNPETAPFVLGHFRDKIKPSTDKEVILY 167
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ L+A+ ++R E ++ EM ++G++ ++TL+ D+A E F+ M S
Sbjct: 168 NATLKAFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLINSARMCALPDKAVEWFKKMPS 227
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
C+PD+ T S+M++ + V A +++ + + ++LI+ YG
Sbjct: 228 F-GCEPDAMTCSAMVSAYAQTNNVDMALSLYGRAKAEKWSLDASTFSTLIKMYGVLGNYV 286
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS-KLGYVVKLLLE 360
+ +R + LG+ P LL + ++ K K V SN ++ L
Sbjct: 287 ECLRIFGEMKVLGVKPTVVTYNTLLGSLFRSKKSWQAKNVYKEMISNGVSPDFITYATLL 346
Query: 361 EQDIEGDFKKEATELFNSI---SKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
++++A ++ + D+ N L+D+C ++ +E A ++ E
Sbjct: 347 RIYAGAQYREDALSVYKEMKGNGMDMTVDLYNRLLDMCADVGCIEEAVEIFE 398
>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 288/432 (66%), Positives = 344/432 (79%), Gaps = 3/432 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RA+ E W +D FSTLIK+Y AGN+D CL VY+EMK +GVKPN+ TYN LL M
Sbjct: 249 YD-RAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAML 307
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R+K+ Q K I+KEM NG+SP++ TYASLL Y RA+ ED L VY+EMK GM ++
Sbjct: 308 RSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTAD 367
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYN LLAMCADVGYTD A EIF +MKSS CQPDSWTFSS+ITI S GKVSE E M NE
Sbjct: 368 LYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNE 427
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+++GF+P +FV+TSLI+CYGKA+RTDDVV+ +L +LGI P+D FC CLLNV+TQTPK
Sbjct: 428 MIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCCLLNVLTQTPK 487
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EELGKL +C+EK+N+KLG VV+ L+EEQ+ + F+KE EL NSI +VKK CNCLIDL
Sbjct: 488 EELGKLTDCIEKANTKLGTVVRYLVEEQESDEGFRKETLELLNSIDAEVKKPLCNCLIDL 547
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
CV LN+ E AC LL+LGL LE+Y +IQS+S TQWSLHLK LS+GAA+TALH+WINDLS+A
Sbjct: 548 CVKLNVPERACGLLDLGLMLEIYKNIQSKSQTQWSLHLKELSVGAAMTALHVWINDLSEA 607
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
LESGE+ PPLLGINTG GKHKYSDKGLASVFES LKELNAPFH++ K GWFL T+AAAK
Sbjct: 608 LESGEDLPPLLGINTGQGKHKYSDKGLASVFESRLKELNAPFHEA--KAGWFLVTKAAAK 665
Query: 515 SWLESRSSLVSV 526
WLESR S S+
Sbjct: 666 LWLESRDSTESI 677
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 142/326 (43%), Gaps = 62/326 (19%)
Query: 36 YSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKE--- 92
+SKT L SLQ + K P K+ S K+ IWVNP+SPRA L++
Sbjct: 31 HSKTLLHAPRFSLQPVNTLQDAKLDD----PDAKSPSLSKNSIWVNPRSPRAKHLQKNSP 86
Query: 93 -----------KSYDTRARNEKW-----------------------RIDPNA-------- 110
KS D+ E+ ++PN
Sbjct: 87 HARSSSLTKLAKSLDSCNPTEQHVSEILNVLRDNVSERDAVFILNTMVNPNTALLALKYF 146
Query: 111 ------------FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
++ +K+ + +F+G +++EM GVKP+ IT++ L++ +
Sbjct: 147 QPKINPAKHVVLYNVTLKVLRESRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGL 206
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
P + ++++M+ G P+ T + ++ AY R + +++Y K + L ++T
Sbjct: 207 PNKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFST 266
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ M + G D+ E++++MK +P+ T+++++ K +A+A+ EM
Sbjct: 267 LIKMYSMAGNYDKCLEVYQEMKVL-GVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSN 325
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVV 304
G P+ SL++ Y +AQ ++D +
Sbjct: 326 GVSPDFITYASLLEVYTRAQCSEDAL 351
>gi|356532361|ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 646
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 276/433 (63%), Positives = 342/433 (78%), Gaps = 1/433 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RA+ EKW +D FS LIK++G +GN+DGCLNVY ++K +G KPN++TYN LL MG
Sbjct: 214 YD-RAKAEKWHVDTVVFSGLIKMHGMSGNYDGCLNVYNDLKVLGAKPNLVTYNALLYAMG 272
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKR K IY+EM +NGL+PNW TYA+LL+AY RAR+ D L+VY+EMKEKG L +
Sbjct: 273 RAKRARDAKAIYEEMINNGLTPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDIL 332
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYN L MCA+VG EA +IFEDMKSS C+PDS+T++S+I + S GK+SE EAMFNE
Sbjct: 333 LYNMLFDMCANVGCEGEAVKIFEDMKSSGTCRPDSFTYASLINMYSSIGKISEMEAMFNE 392
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+E+GFEPN+ VLTSL+ CYGKA+RTDDVV+ N+L +LGI+PD RFC CLL MTQ PK
Sbjct: 393 MMESGFEPNIIVLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPDGRFCDCLLYAMTQVPK 452
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EELGKL CVEK+N KLG V++ ++E+Q+ GDF+ EA+EL NS D+KK+ CNCLIDL
Sbjct: 453 EELGKLTGCVEKANPKLGSVLRYIMEKQEGGGDFRMEASELLNSTEADIKKSMCNCLIDL 512
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
CVNL++ + A LL+LGLTLE+YTDIQSRS +WSLHLK LS+GAALTAL +WINDLSK
Sbjct: 513 CVNLDVPDRARDLLDLGLTLEIYTDIQSRSQAKWSLHLKRLSVGAALTALSVWINDLSKT 572
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
LE GEE PPLLGINTG GKH++SDK L +VFE +LKEL APFH + +K GWFL T AA
Sbjct: 573 LELGEELPPLLGINTGGGKHRFSDKVLPTVFELYLKELKAPFHKAANKAGWFLATSEAAT 632
Query: 515 SWLESRSSLVSVP 527
SWL+SR S+V +P
Sbjct: 633 SWLQSRGSVVVLP 645
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 127/283 (44%), Gaps = 10/283 (3%)
Query: 38 KTSLQKRSVSL----QETQSSNPTKH--SQNPQYPHGKTGSSPKSYIWVNPKSPRASKLK 91
K S RS SL + S NPT+ S+ + + +I + +P + L
Sbjct: 48 KNSYHTRSSSLTKLARSLDSCNPTQQHVSEILKVLGDNVLEADAVFILNSMVNPYTALLA 107
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+ + + ++ + I ++ +KL+ +F+G +++EM GV PN+IT++ ++
Sbjct: 108 VEYFKQKIKHARHVI---LYNVTLKLFREVKDFEGAEKLFDEMLQRGVNPNLITFSTMII 164
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
P + ++ M G P+ N +S++ +Y R + L +Y K + +
Sbjct: 165 CASVCSLPHKAVKWFEMMPSFGCEPDDNVCSSMIYSYARTGNADMALRLYDRAKAEKWHV 224
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+++ L+ M G D ++ D+K +P+ T+++++ + +A+A+
Sbjct: 225 DTVVFSGLIKMHGMSGNYDGCLNVYNDLKVL-GAKPNLVTYNALLYAMGRAKRARDAKAI 283
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+ EM+ G PN +L+Q Y +A+ D + + E G
Sbjct: 284 YEEMINNGLTPNWPTYAALLQAYCRARFNRDALNVYKEMKEKG 326
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 115/276 (41%), Gaps = 23/276 (8%)
Query: 65 YPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARN--------EKWRIDPNAFSTLIK 116
Y + K+ S K+ IWVNPKSPRA L + SY TR+ + + S ++K
Sbjct: 21 YDYAKSSSLSKTSIWVNPKSPRAKHLWKNSYHTRSSSLTKLARSLDSCNPTQQHVSEILK 80
Query: 117 LYG-------TAGNFDGCLNVYEEMKA-------IGVKPNMITYNNLLDTMGRAKRPWQV 162
+ G + +N Y + A I ++I YN L K
Sbjct: 81 VLGDNVLEADAVFILNSMVNPYTALLAVEYFKQKIKHARHVILYNVTLKLFREVKDFEGA 140
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ ++ EM G++PN T+++++ + + M G + + ++++
Sbjct: 141 EKLFDEMLQRGVNPNLITFSTMIICASVCSLPHKAVKWFEMMPSFGCEPDDNVCSSMIYS 200
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
A G D A +++ K +E D+ FS +I + G ++N++ G +P
Sbjct: 201 YARTGNADMALRLYDRAK-AEKWHVDTVVFSGLIKMHGMSGNYDGCLNVYNDLKVLGAKP 259
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
NL +L+ G+A+R D + G+TP+
Sbjct: 260 NLVTYNALLYAMGRAKRARDAKAIYEEMINNGLTPN 295
>gi|356577949|ref|XP_003557083.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 700
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 282/432 (65%), Positives = 338/432 (78%), Gaps = 4/432 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RA EKW +D FS LIK+Y AGN+D CL VY+EMK +G KPN++TYN LL M
Sbjct: 259 YD-RAIAEKWCLDAATFSALIKMYSMAGNYDKCLKVYQEMKVLGAKPNVVTYNTLLGAML 317
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+A++ Q K IYKEM NG+SP++ TYA LL Y A E+ L VY+EMK GM ++
Sbjct: 318 KAQKHRQAKAIYKEMKSNGVSPDFITYACLLEVYTIAHCSEEALGVYKEMKGNGMDMTAD 377
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYN LLAMCADVGYTD A EIF +MKSS CQPDSWTFSSMIT+ S GKVSEAE M NE
Sbjct: 378 LYNKLLAMCADVGYTDRAAEIFYEMKSSGTCQPDSWTFSSMITMYSRSGKVSEAEGMLNE 437
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+++GF+P +FVLTSL+ CYGKA+RTDDVV+ +L +LGI P+D FC LLNV+TQTPK
Sbjct: 438 MIQSGFQPTIFVLTSLVHCYGKAKRTDDVVKVFKQLLDLGIVPNDHFCCSLLNVLTQTPK 497
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EE GKL +C+EK+N+KLG VVK L+EE+ +GDFKKEA+E NSI VK CNCLIDL
Sbjct: 498 EEYGKLTDCIEKANTKLGSVVKYLVEEEG-DGDFKKEASEFLNSIDAKVKMPLCNCLIDL 556
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
CV LN+ E AC LL+LGL LE+Y +IQS+S TQWSLHLK LS+GAA+TALH+WIN+LSKA
Sbjct: 557 CVKLNVPERACDLLDLGLVLEIYPNIQSKSQTQWSLHLKELSVGAAMTALHVWINELSKA 616
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
LESGE+ PPLLGINTG GK KYS+KGLA VFESHLKEL+APFH++ K GWFL T+AAAK
Sbjct: 617 LESGEDLPPLLGINTGKGKLKYSEKGLAGVFESHLKELHAPFHEA--KAGWFLVTKAAAK 674
Query: 515 SWLESRSSLVSV 526
SWLESR S+ +
Sbjct: 675 SWLESRGSIADL 686
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 34/302 (11%)
Query: 63 PQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARN--------EKWRIDPNAFSTL 114
PQ P K+ S K+ IWVNPKSPR L + Y R+ + + S +
Sbjct: 69 PQDPDAKSSSLSKTSIWVNPKSPRVKHLWKNPYHARSSSLTKLAKSLDSCNPTQQRVSQI 128
Query: 115 IKLYG-------TAGNFDGCLNVYEEMKAIG------VKP--NMITYNNLLDTMGRAKRP 159
+++ G + +N Y + A+ +KP +++ YN L + RA R
Sbjct: 129 LQVLGDKVFESDAVVILNSMVNPYTALLAVNYYFTQKIKPSRHVVLYNVTLK-LFRAVRD 187
Query: 160 WQ-VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
++ + ++ EM G+ PN T+++++ + + ++ +M G + +
Sbjct: 188 FEGEEKLFDEMLQRGVKPNNFTFSTMVNCANKP------VELFEKMSGFGYEPDGITCSA 241
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ A D+A +++ + + C D+ TFS++I + S G + ++ EM
Sbjct: 242 MVYAYALSNNVDKAVSLYDRAIAEKWCL-DAATFSALIKMYSMAGNYDKCLKVYQEMKVL 300
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT--QTPKEE 336
G +PN+ +L+ KAQ+ + G++PD CLL V T +E
Sbjct: 301 GAKPNVVTYNTLLGAMLKAQKHRQAKAIYKEMKSNGVSPDFITYACLLEVYTIAHCSEEA 360
Query: 337 LG 338
LG
Sbjct: 361 LG 362
>gi|356557983|ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 707
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 278/432 (64%), Positives = 336/432 (77%), Gaps = 4/432 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RA EKW +D AFS LIK+Y AGN+D CL +Y+EMK +GVKPN++TYN LL M
Sbjct: 263 YD-RAIAEKWCLDAAAFSALIKMYSMAGNYDRCLKIYQEMKVLGVKPNVVTYNTLLGAML 321
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+A++ Q K IYKEM NG+SP++ TYA LL Y A Y ED L VY+EMK GM ++
Sbjct: 322 KAEKHRQAKAIYKEMRSNGVSPDFITYACLLEVYTIAHYSEDALGVYKEMKGNGMDMTAD 381
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYN LLAM AD+GY D A EIF +M SS CQPDSWTF+S+I I S GKVSEAE M NE
Sbjct: 382 LYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQPDSWTFASLIAIYSRSGKVSEAEGMLNE 441
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+++GF+P +FVLTSL+ CYGKA+RTDDVV+ +L ELGI P+D FC LLNV+TQ PK
Sbjct: 442 MIQSGFQPTIFVLTSLVHCYGKAKRTDDVVKVFKQLLELGIVPNDHFCCSLLNVLTQAPK 501
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EELGKL +C+EK+N+KLG VVK L+EE+ +GDF+ E +E NSI +VK CNCLIDL
Sbjct: 502 EELGKLTDCIEKANTKLGSVVKYLVEEEG-DGDFRNEVSEFLNSIDAEVKMPLCNCLIDL 560
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
CV LN+ E AC LL+LGL LE+Y +IQS+S TQWSLHLK LS+GAA+TALH+WINDLSKA
Sbjct: 561 CVKLNVPERACDLLDLGLMLEIYKNIQSKSQTQWSLHLKELSVGAAMTALHVWINDLSKA 620
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
LESGE+ PPLLGINTG GKHKYS+KGLA +FESHLKELNAPFH++ K GWFL T+A AK
Sbjct: 621 LESGEDLPPLLGINTGKGKHKYSEKGLAGIFESHLKELNAPFHEA--KAGWFLATKAPAK 678
Query: 515 SWLESRSSLVSV 526
SWLESR S+ +
Sbjct: 679 SWLESRGSIADL 690
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 141/324 (43%), Gaps = 32/324 (9%)
Query: 31 DSLSFYSKT-SLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASK 89
+S S++S+ L +S + ++ + + PQ P K+ P++ IWVNPKSPRA
Sbjct: 41 NSFSYFSRHFKLPTFPLSHNKPKTLLQVQAANTPQDPDAKSSPLPQTSIWVNPKSPRAKH 100
Query: 90 LKEKSYDTRARN--------EKWRIDPNAFSTLIKLYG-------TAGNFDGCLNVYEEM 134
L + Y R+ + + S ++++ G + +N Y +
Sbjct: 101 LWKNPYHARSSSLTKLAKSLDSCNPTQQHVSEILRVLGDNVFESDAVVILNSMVNPYTAL 160
Query: 135 KAIG-----VKP--NMITYNNLLDTMGRAKRPWQ-VKTIYKEMTDNGLSPNWNTYASLLR 186
A+ +KP +++ YN L + RA R ++ + ++ EM G+ PN T+++++
Sbjct: 161 LAVNYFNQKIKPSRHVVLYNVTLK-LFRASRDFEGAEKLFDEMLQRGVKPNNFTFSTMVN 219
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
+ + ++ +M G + + ++ A D+A +++ + + C
Sbjct: 220 CANKP------VELFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAEKWCL 273
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
D+ FS++I + S G ++ EM G +PN+ +L+ KA++
Sbjct: 274 -DAAAFSALIKMYSMAGNYDRCLKIYQEMKVLGVKPNVVTYNTLLGAMLKAEKHRQAKAI 332
Query: 307 LNRLPELGITPDDRFCGCLLNVMT 330
+ G++PD CLL V T
Sbjct: 333 YKEMRSNGVSPDFITYACLLEVYT 356
>gi|356557981|ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 706
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/433 (63%), Positives = 336/433 (77%), Gaps = 1/433 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RA+ KW +D FS LIK+YG +GN+ GCLNVY +MK +G KPN+ TYN LL MG
Sbjct: 274 YD-RAKAGKWHVDTAVFSGLIKMYGVSGNYVGCLNVYNDMKVLGAKPNLTTYNALLYAMG 332
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RAKR K IY EM NGLSPNW TYA+LL+AY RAR+ D L+VY+EMKEKG L +
Sbjct: 333 RAKRARDAKAIYGEMISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKEKGKDLDIL 392
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LYN L MCA+VG DEA +IFE MKSS C PDS+T++S+I + S GK+ E EAMFNE
Sbjct: 393 LYNMLFDMCANVGCVDEAVKIFEHMKSSGTCPPDSFTYASLINMYSSIGKILEMEAMFNE 452
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+E+GFEPN+ VLTSL+ CYGKA+RTDDVV+ N+L +LGI+PD RFC CLL MTQ PK
Sbjct: 453 MMESGFEPNIIVLTSLVHCYGKAKRTDDVVKIFNQLMDLGISPDGRFCDCLLYAMTQVPK 512
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EELGKL CVEK+N KLG V++ ++E+Q+ GDF+ EA+ELFNS DVKK+ CNCLIDL
Sbjct: 513 EELGKLSGCVEKANPKLGSVLRYIMEKQEGGGDFRTEASELFNSTEADVKKSMCNCLIDL 572
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
CV+L++ + A LL+LGLTLE+Y DIQSRS +WSLHLK LS+GAALTAL +WI+DLSKA
Sbjct: 573 CVSLDVPDRARDLLDLGLTLEIYPDIQSRSQAKWSLHLKRLSVGAALTALSVWISDLSKA 632
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
LE GEE PPLLGINTG GKH++SDK L +VFES+LKEL APFH +K GWFL T AA
Sbjct: 633 LELGEELPPLLGINTGGGKHRFSDKVLPTVFESYLKELKAPFHKDANKAGWFLATSEAAT 692
Query: 515 SWLESRSSLVSVP 527
SWL+SR S V++P
Sbjct: 693 SWLQSRGSTVALP 705
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 125/283 (44%), Gaps = 10/283 (3%)
Query: 38 KTSLQKRSVSL----QETQSSNPTK-HSQNPQYPHGKTGSSPKSYIWVNPK-SPRASKLK 91
K S RS SL + S NPT+ H G + P + +N +P + L
Sbjct: 108 KNSYHARSSSLTKLAKSLDSCNPTQEHVSEILKVLGDSVLEPDAVFILNSMVNPYTALLA 167
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+ + + ++ + I ++ +KL+ +F+G +++EM GV PN+IT++ ++
Sbjct: 168 VEYFKQKVKSVRHVI---LYNVTLKLFRKVKDFEGAEKLFDEMLHRGVNPNLITFSTMIS 224
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
P + ++ M G P+ N +S++ AY R + L +Y K +
Sbjct: 225 CASVCSLPHKAVKWFEMMPSFGCEPDNNVCSSMIYAYTRTGNTDMALRLYDRAKAGKWHV 284
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+++ L+ M G ++ DMK +P+ T+++++ + +A+A+
Sbjct: 285 DTAVFSGLIKMYGVSGNYVGCLNVYNDMKVL-GAKPNLTTYNALLYAMGRAKRARDAKAI 343
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+ EM+ G PN +L+Q Y +A+ D + + E G
Sbjct: 344 YGEMISNGLSPNWPTYAALLQAYCRARFNRDALNVYKEMKEKG 386
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 150/355 (42%), Gaps = 32/355 (9%)
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
P+ K+ K+ IWVNPKSPRA L + SY R+ S+L KL A + D
Sbjct: 82 PNAKSSPLSKTSIWVNPKSPRAKHLWKNSYHARS------------SSLTKL---AKSLD 126
Query: 126 GC----LNVYEEMKAIG---VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW 178
C +V E +K +G ++P+ + +L++M +K+ + +
Sbjct: 127 SCNPTQEHVSEILKVLGDSVLEPDAVF---ILNSMVNPYTALLAVEYFKQKVKS--VRHV 181
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
Y L+ + + + E ++ EM +G+ ++ ++T+++ + +A + FE
Sbjct: 182 ILYNVTLKLFRKVKDFEGAEKLFDEMLHRGVNPNLITFSTMISCASVCSLPHKAVKWFE- 240
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
M S C+PD+ SSMI + G A +++ + + V + LI+ YG +
Sbjct: 241 MMPSFGCEPDNNVCSSMIYAYTRTGNTDMALRLYDRAKAGKWHVDTAVFSGLIKMYGVSG 300
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS-KLGYVVKL 357
+ N + LG P+ LL M + + K + SN +
Sbjct: 301 NYVGCLNVYNDMKVLGAKPNLTTYNALLYAMGRAKRARDAKAIYGEMISNGLSPNWPTYA 360
Query: 358 LLEEQDIEGDFKKEATELFNSI---SKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
L + F ++A ++ + KD+ N L D+C N+ ++ A K+ E
Sbjct: 361 ALLQAYCRARFNRDALNVYKEMKEKGKDLDILLYNMLFDMCANVGCVDEAVKIFE 415
>gi|297736717|emb|CBI25753.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/432 (66%), Positives = 329/432 (76%), Gaps = 38/432 (8%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K YD RAR EKWRIDP FSTLI++YG +GNFDGCLNV
Sbjct: 267 KLYD-RARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNV---------------------- 303
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
Y+EM G+ PN Y +LL A GRA+ ++Y+EM G+Q S
Sbjct: 304 -------------YEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPS 350
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMK--SSENCQPDSWTFSSMITICSCRGKVSEAEA 270
Y LL Y ++A ++++MK S NC PDSWTFSS+ITI SC GKVSEAEA
Sbjct: 351 WGTYAALLRAYGRARYAEDALIVYKEMKEKGSGNCMPDSWTFSSLITIYSCSGKVSEAEA 410
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
M N MLEAGFEPN+FVLTSLIQCYGKA RTD+VVR +RL EL ITPDDRFCGC+LNVMT
Sbjct: 411 MLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRFCGCMLNVMT 470
Query: 331 QTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNC 390
Q+PKEELGKL++C++K+N KLG VVKLLLEEQ+ EG F+KEA+ELF+SIS DVKKAYCNC
Sbjct: 471 QSPKEELGKLIDCIDKANPKLGNVVKLLLEEQNGEGTFRKEASELFDSISADVKKAYCNC 530
Query: 391 LIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWIND 450
LIDLCVNLNLLE AC+L +LGLTLE+Y DIQS+SPTQWSLHLKSLSLGAALTALHIW+ND
Sbjct: 531 LIDLCVNLNLLEKACELFDLGLTLEIYIDIQSKSPTQWSLHLKSLSLGAALTALHIWMND 590
Query: 451 LSKALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTE 510
LSKA+E GEE P +LGINTGHGKHKYSDKGLASVFESHLKELNAPFH++PDKVGWFLTT+
Sbjct: 591 LSKAVEVGEELPAVLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPDKVGWFLTTK 650
Query: 511 AAAKSWLESRSS 522
AA SWLESRS+
Sbjct: 651 VAATSWLESRSA 662
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
CR + AE +F+EMLE G +P+ +++I C + + V ++PE G PDD
Sbjct: 189 CRN-LDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDD 246
>gi|212275714|ref|NP_001130387.1| uncharacterized protein LOC100191483 [Zea mays]
gi|194689000|gb|ACF78584.1| unknown [Zea mays]
gi|414865541|tpg|DAA44098.1| TPA: hypothetical protein ZEAMMB73_448674 [Zea mays]
Length = 691
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 265/437 (60%), Positives = 336/437 (76%), Gaps = 7/437 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKW++DP ST+IK++ T+GNFDG LNV+EEMKAIGV+PN++ YN +LD MG
Sbjct: 257 YD-RARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMG 315
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RA RPW VKTI++EM D + P+ TY LL AY RARYGED ++VYR MK++ M + V
Sbjct: 316 RALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVM 375
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSS--ENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
LYN LL+MCAD+GY DEA EIF DMK+S + +PDSW++SSM+T+ S V AE +
Sbjct: 376 LYNMLLSMCADIGYVDEAEEIFRDMKASMGAHSKPDSWSYSSMVTLYSSTANVLSAEGIL 435
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
NEM+EAGF+PN+FVLTSLI+CYGK RTDDVVR+ L +LGI PDDRFCGCLL+V T
Sbjct: 436 NEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANT 495
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI 392
P EELGK++ C+E+SN +LG VVKLL++ E F++ A EL S VK YCNCL+
Sbjct: 496 PAEELGKVISCIERSNVQLGAVVKLLVDRSSSE-SFREAARELLRSSRGVVKMPYCNCLM 554
Query: 393 DLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
DLCVNLN +E AC LL+ L +Y +IQ+R+ TQWSLHL+ LS+GAALT LH+W+NDL
Sbjct: 555 DLCVNLNQMEKACALLDAAQQLGIYANIQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLY 614
Query: 453 KALESGEE-FPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEA 511
+L++G E PPLLGI+TG GK+ YSD+GLA++FE+HLKEL+APFH++PDK GWFLTT
Sbjct: 615 TSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNV 674
Query: 512 AAKSWLESR--SSLVSV 526
AAK WLES+ S LV+V
Sbjct: 675 AAKQWLESKAASELVTV 691
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++ EM GV+P+ T++ ++ + + +M + G SP+ TY++++ AYG
Sbjct: 186 LWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYG 245
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
A E L +Y + + QL + +T++ + + G D A +FE+MK+ +P+
Sbjct: 246 HAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEMKAI-GVRPNL 304
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+++M+ + + + EM++ +P+ L+ Y +A+ +D + A+ R
Sbjct: 305 VVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAM-AVYR 363
Query: 310 L 310
L
Sbjct: 364 L 364
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 41/237 (17%)
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y +L+ + R +T +++ EM G+Q ++T+++ G +A E F+ M
Sbjct: 167 YNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEWFDKMP 226
Query: 241 SSENCQPDSWTFSSMI----------------------------TICSCRGKVSEAEA-- 270
C PD T+S++I ICS KV
Sbjct: 227 EF-GCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSTSGNF 285
Query: 271 -----MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR-LPELGITPDDRFCGC 324
+F EM G PNL V +++ G+A R VV+ ++R + + + P C
Sbjct: 286 DGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRP-WVVKTIHREMVDQQVQPSRATYCC 344
Query: 325 LLNVMTQTPKEELGKLVECVEKSNSKLGYVVKL--LLEEQDIEGDFKKEATELFNSI 379
LL+ T+ E V + K + +G V L +L + + EA E+F +
Sbjct: 345 LLHAYTRARYGEDAMAVYRLMK-DEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDM 400
>gi|242036493|ref|XP_002465641.1| hypothetical protein SORBIDRAFT_01g042790 [Sorghum bicolor]
gi|241919495|gb|EER92639.1| hypothetical protein SORBIDRAFT_01g042790 [Sorghum bicolor]
Length = 691
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/437 (59%), Positives = 332/437 (75%), Gaps = 6/437 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKW++DP ST+IK++ +GNFDG LNV+EEMKA GVKPN++ YN +LD MG
Sbjct: 256 YD-RARAEKWQLDPVICSTVIKVHSISGNFDGALNVFEEMKATGVKPNLVVYNTMLDAMG 314
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RA RPW VKTI++EM D + P+ TY LL AY RARYGED ++VYR MK++ M + V
Sbjct: 315 RALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMDIDVM 374
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENC--QPDSWTFSSMITICSCRGKVSEAEAMF 272
LYN LL+MCAD+GY DEA EIF DMK+S + +PDSW++SSM+T+ S V AE +
Sbjct: 375 LYNMLLSMCADIGYVDEAEEIFRDMKASMDACSKPDSWSYSSMVTLYSSTANVLGAEGIL 434
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
NEM+EAGF+PN+FVLTSLI+CYGK RTDDVV++ L +L I PDDRFCGCLL+V T
Sbjct: 435 NEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVKSFGMLQDLCIIPDDRFCGCLLSVAANT 494
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI 392
P EELGK++ C+E SN++LG VVKLL++ F++ A+EL VK YCNCL+
Sbjct: 495 PVEELGKVISCIETSNAQLGAVVKLLVDRSSSPESFREAASELLGCSRGVVKMPYCNCLM 554
Query: 393 DLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
DLCVNLN +E AC LL+ L +Y +IQ+R+ TQWSLHL+ LS+GAALT LH+W+NDL
Sbjct: 555 DLCVNLNQMEKACALLDAAQQLSIYANIQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLY 614
Query: 453 KALESGEE-FPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEA 511
+L++G E PPLLGI+TG GK+ YSD+GLA++FE+HLKEL+APFH++PDK GWFLTT
Sbjct: 615 TSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMFEAHLKELDAPFHEAPDKAGWFLTTSV 674
Query: 512 AAKSWLESR--SSLVSV 526
AAK WLE++ S LV+V
Sbjct: 675 AAKHWLETKAASELVTV 691
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++ EM GV+P+ T++ ++ + + +M + G SP+ TY++++ AYG
Sbjct: 185 LWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYG 244
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
RA E L +Y + + QL + +T++ + + G D A +FE+MK++ +P+
Sbjct: 245 RAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSISGNFDGALNVFEEMKAT-GVKPNL 303
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+++M+ + + + EM++ +P+ L+ Y +A+ +D + A+ R
Sbjct: 304 VVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAM-AVYR 362
Query: 310 L 310
L
Sbjct: 363 L 363
>gi|297600539|ref|NP_001049380.2| Os03g0215900 [Oryza sativa Japonica Group]
gi|108706847|gb|ABF94642.1| RSP67.2, putative, expressed [Oryza sativa Japonica Group]
gi|255674311|dbj|BAF11294.2| Os03g0215900 [Oryza sativa Japonica Group]
Length = 676
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/436 (58%), Positives = 337/436 (77%), Gaps = 5/436 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EKW++DP +T+I+++ ++GNFDG LNV+EEMKA GVKPN++ YN +LD MG
Sbjct: 242 YD-RARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMG 300
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RA RPW VKTI++E+ PN TY LL AY RARYGED ++VYR MK++ M + V
Sbjct: 301 RAMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVV 360
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ--PDSWTFSSMITICSCRGKVSEAEAMF 272
LYN LL+MCAD+GY +EA EIF DMK+S + + PDSW++SSM+T+ SC G V+ AE +
Sbjct: 361 LYNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGIL 420
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
NEM+EAGF+PN+F+LTSLI+CYGKA RTDDVVR+ L +LGITPDDRFCGCLL V T
Sbjct: 421 NEMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGT 480
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI 392
P +ELGK++ C+++S+++LG VV+LL++ ++ A EL V+ YCNCL+
Sbjct: 481 PADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLM 540
Query: 393 DLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
DL VNL+ +E AC LL++ L L +Y+++Q+R+ TQWSLHL+ LS+GAALT LH+W++DL
Sbjct: 541 DLAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLY 600
Query: 453 KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
AL++G+E PPLLGI+TG GK+ YS KGLA+VFESHLKEL+APFH++PDK GWFLTT A
Sbjct: 601 AALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVA 660
Query: 513 AKSWLESRSS--LVSV 526
A+ WLE++ S LV+V
Sbjct: 661 ARHWLETKKSAELVAV 676
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 39/252 (15%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++EEM GV+P+ T++ ++ P + +++M D G SP+ TY++++ AYG
Sbjct: 171 LWEEMLREGVQPDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYG 230
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
RA E L +Y + + QL + T++ + + G D A +FE+MK+
Sbjct: 231 RAGDAETALRLYDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKA-------- 282
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
AG +PNL V +++ G+A R VV+ ++R
Sbjct: 283 ----------------------------AGVKPNLVVYNTVLDAMGRAMRP-WVVKTIHR 313
Query: 310 -LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS-KLGYVVKLLLEEQDIEGD 367
L P+ CLL+ T+ E V V K + V+ +L +
Sbjct: 314 ELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLYNMLLSMCADIG 373
Query: 368 FKKEATELFNSI 379
+ +EA E+F +
Sbjct: 374 YVEEAEEIFRDM 385
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
AR L+++ ++ ++ V LYN L +A ++E+M E QPD+
Sbjct: 127 ARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLR-EGVQPDNA 185
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
TFS++I+ G +A F +M + G P++ +++I YG+A + +R +R
Sbjct: 186 TFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLYDRA 245
Query: 311 PELGITPDDRFCGCLLNVMTQT 332
D C ++ V + +
Sbjct: 246 RAEKWQLDPVICATVIRVHSSS 267
>gi|357113402|ref|XP_003558492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Brachypodium distachyon]
Length = 688
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 257/436 (58%), Positives = 330/436 (75%), Gaps = 5/436 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR EK ++DP +T+IK++ T+GNF G LNV+EEMKA+GVKPN++ YN +LD MG
Sbjct: 254 YD-RARAEKCQLDPVICATVIKVHSTSGNFAGALNVFEEMKAVGVKPNLVVYNTVLDAMG 312
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RA RPW VKTI++EM + PN TY LL+AY RARYGED + VYR MK++ M + V
Sbjct: 313 RAMRPWVVKTIHREMVSQQVQPNRATYCCLLQAYTRARYGEDAMVVYRMMKDEVMDIDVV 372
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ--PDSWTFSSMITICSCRGKVSEAEAMF 272
LYN LL+MCAD+GY DEA EIF DMK+ + + PDSWT+SSM+T+ SC G V AE +
Sbjct: 373 LYNMLLSMCADIGYIDEAEEIFRDMKAHTDTRFKPDSWTYSSMVTLYSCTGNVLGAEGIL 432
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
EM EAGF+PN+F+LTSLI+CYGKA TDDVVR+ L +L I PDDRFCGCLL V T
Sbjct: 433 KEMAEAGFKPNIFILTSLIRCYGKAGHTDDVVRSFGMLEDLNIRPDDRFCGCLLTVAADT 492
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI 392
P EELGK+V+C+++SN++LG VVKLL++ F++ A + + + VK YCNCL+
Sbjct: 493 PVEELGKVVDCIDRSNAQLGTVVKLLVDRNASTESFREAARGILSGVRGVVKVPYCNCLM 552
Query: 393 DLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
DLCVNL E AC LL++ L L+VY ++Q+++ TQWSLHL+ LS+GAALT LH+W+NDL
Sbjct: 553 DLCVNLGQTEKACALLDVALQLDVYRNVQTKTQTQWSLHLRGLSVGAALTTLHVWMNDLR 612
Query: 453 KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
L+SGEE PPLLGI+TG G++ YSDKGLAS FESHLKE++APFH +PDK GWFLTT A
Sbjct: 613 STLQSGEELPPLLGIHTGEGRNMYSDKGLASAFESHLKEIDAPFHAAPDKAGWFLTTSVA 672
Query: 513 AKSWLESR--SSLVSV 526
AK WL+++ S LV+V
Sbjct: 673 AKHWLKAKESSELVAV 688
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++EM GV+P+ T++ ++ P + +++M G SP+ TY++++ AYG
Sbjct: 183 LWDEMLRDGVQPDNTTFSTVISCARACGLPRKAVEWFEKMPGLGCSPDMLTYSAVIDAYG 242
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
RA + L +Y + + QL + T++ + + G A +FE+MK+ +P+
Sbjct: 243 RAGDADMALRLYDRARAEKCQLDPVICATVIKVHSTSGNFAGALNVFEEMKAV-GVKPNL 301
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+++++ + + + EM+ +PN L+Q Y +A+ +D +
Sbjct: 302 VVYNTVLDAMGRAMRPWVVKTIHREMVSQQVQPNRATYCCLLQAYTRARYGEDAM 356
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 39/236 (16%)
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y +L+A + R DT +++ EM G+Q T ++T+++ G +A E FE M
Sbjct: 164 YNVVLKALRKRRRWSDTEALWDEMLRDGVQPDNTTFSTVISCARACGLPRKAVEWFEKMP 223
Query: 241 SSENCQPDSWTFSSMI----------------------------TIC-------SCRGKV 265
C PD T+S++I IC S G
Sbjct: 224 GL-GCSPDMLTYSAVIDAYGRAGDADMALRLYDRARAEKCQLDPVICATVIKVHSTSGNF 282
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR-LPELGITPDDRFCGC 324
+ A +F EM G +PNL V +++ G+A R VV+ ++R + + P+ C
Sbjct: 283 AGALNVFEEMKAVGVKPNLVVYNTVLDAMGRAMRP-WVVKTIHREMVSQQVQPNRATYCC 341
Query: 325 LLNVMTQTPKEELGKLVECVEKSNS-KLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
LL T+ E +V + K + V+ +L + + EA E+F +
Sbjct: 342 LLQAYTRARYGEDAMVVYRMMKDEVMDIDVVLYNMLLSMCADIGYIDEAEEIFRDM 397
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 203 EMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
E++ KG+ LYN +L A+ ++D E D + QPD+ TFS++I+
Sbjct: 156 EVRNKGI-----LYNVVLKALRKRRRWSDT--EALWDEMLRDGVQPDNTTFSTVISCARA 208
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G +A F +M G P++ +++I YG+A D +R +R D
Sbjct: 209 CGLPRKAVEWFEKMPGLGCSPDMLTYSAVIDAYGRAGDADMALRLYDRARAEKCQLDPVI 268
Query: 322 CGCLLNV 328
C ++ V
Sbjct: 269 CATVIKV 275
>gi|125585400|gb|EAZ26064.1| hypothetical protein OsJ_09917 [Oryza sativa Japonica Group]
Length = 552
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 246/431 (57%), Positives = 329/431 (76%), Gaps = 7/431 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN W + +T+I+++ ++GNFDG LNV+EEMKA GVKPN++ YN +LD MGRA RP
Sbjct: 125 RNGSWTV---ICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRAMRP 181
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
W VKTI++E+ PN TY LL AY RARYGED ++VYR MK++ M + V LYN L
Sbjct: 182 WVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLYNML 241
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQ--PDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+MCAD+GY +EA EIF DMK+S + + PDSW++SSM+T+ SC G V+ AE + NEM+E
Sbjct: 242 LSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMVE 301
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
AGF+PN+F+LTSLI+CYGKA RTDDVVR+ L +LGITPDDRFCGCLL V TP +EL
Sbjct: 302 AGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTPADEL 361
Query: 338 GKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
GK++ C+++S+++LG VV+LL++ ++ A EL V+ YCNCL+DL VN
Sbjct: 362 GKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMDLAVN 421
Query: 398 LNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALES 457
L+ +E AC LL++ L L +Y+++Q+R+ TQWSLHL+ LS+GAALT LH+W++DL AL++
Sbjct: 422 LSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYAALQA 481
Query: 458 GEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWL 517
G+E PPLLGI+TG GK+ YS KGLA+VFESHLKEL+APFH++PDK GWFLTT AA+ WL
Sbjct: 482 GDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAARHWL 541
Query: 518 ESRSS--LVSV 526
E++ S LV+V
Sbjct: 542 ETKKSAELVAV 552
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
L+++ ++ ++ V LYN L +A ++E+M E QPD+ TFS++I
Sbjct: 9 VLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLR-EGVQPDNATFSTVI 67
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ G +A F +M + G P++ +++I YG+A+ D
Sbjct: 68 SCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRARGRRD 113
>gi|218192336|gb|EEC74763.1| hypothetical protein OsI_10529 [Oryza sativa Indica Group]
Length = 397
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 231/397 (58%), Positives = 305/397 (76%), Gaps = 4/397 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MKA GVKPN++ YN +LD MGRA RPW VKTI++E+ PN TY LL AY RARY
Sbjct: 1 MKAAGVKPNLVVYNTVLDAMGRAMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARY 60
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ--PDSWT 251
GED ++VYR MK++ M + V LYN LL+MCAD+GY +EA EIF DMK+S + + PDSW+
Sbjct: 61 GEDAMAVYRVMKDEVMDIDVVLYNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWS 120
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+SSM+T+ SC G V+ AE + NEM+EAGF+PN+F+LTSLI+CYGKA RTDDVVR+ L
Sbjct: 121 YSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLE 180
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKE 371
+LGITPDDRFCGCLL V TP +ELGK++ C+++S+++LG VV+LL++ ++
Sbjct: 181 DLGITPDDRFCGCLLTVAAGTPADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREA 240
Query: 372 ATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLH 431
A EL V+ YCNCL+DL VNL+ +E AC LL++ L L +Y+++Q+R+ TQWSLH
Sbjct: 241 AGELLGGARGVVRMPYCNCLMDLAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLH 300
Query: 432 LKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKE 491
L+ LS+GAALT LH+W++DL AL++G+E PPLLGI+TG GK+ YS KGLA+VFESHLKE
Sbjct: 301 LRGLSVGAALTTLHVWMSDLYAALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKE 360
Query: 492 LNAPFHDSPDKVGWFLTTEAAAKSWLESRSS--LVSV 526
L+APFH++PDK GWFLTT AA+ WLE++ S LV+V
Sbjct: 361 LDAPFHEAPDKAGWFLTTSVAARHWLETKKSAELVAV 397
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+ S D+R++ + W ++S+++ LY GN G + EM G KPN+ +L+
Sbjct: 107 KASMDSRSKPDSW-----SYSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIFILTSLIR 161
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPN 177
G+A R V + + D G++P+
Sbjct: 162 CYGKAGRTDDVVRSFAMLEDLGITPD 187
>gi|224089785|ref|XP_002308813.1| predicted protein [Populus trichocarpa]
gi|222854789|gb|EEE92336.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/245 (70%), Positives = 202/245 (82%), Gaps = 1/245 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
AR +WR+D FSTLI++Y AGNFDG LNV EEMKA+GVKPN++ YN LLD MGRA
Sbjct: 3 VHARTGEWRLDATTFSTLIRIYKVAGNFDGYLNVSEEMKALGVKPNLVIYNILLDAMGRA 62
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
KRPWQVK Y+++ DNGLSP++ T+A+LL AYGRARYG+D +YREMKEKG+ L+V LY
Sbjct: 63 KRPWQVKKFYQDIIDNGLSPSFVTFAALLHAYGRARYGDDAFKIYREMKEKGLGLNVVLY 122
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N++LAMCAD+G+ D+A EIFEDMKSS +PDSWTFSSMITI SC GKVSE E NEM
Sbjct: 123 NSILAMCADLGHVDKAVEIFEDMKSS-GIKPDSWTFSSMITIFSCCGKVSEVENTLNEMF 181
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
EAGF+PN+F+LTSLIQCYGKAQR DDVV+ NR+ EL ITPDDRFCGCLLNVMTQTP EE
Sbjct: 182 EAGFQPNIFILTSLIQCYGKAQRIDDVVKTFNRIFELVITPDDRFCGCLLNVMTQTPNEE 241
Query: 337 LGKLV 341
L KLV
Sbjct: 242 LSKLV 246
>gi|357476703|ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509692|gb|AES90834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 715
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/431 (41%), Positives = 280/431 (64%), Gaps = 4/431 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R W+ DP FS L K++G AG++DG V +EMK++GV+PN++ YN LL+ MG+A
Sbjct: 285 RGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAG 344
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P +++++EM D+G++PN T ++++ YG+AR+ +D L +++ MKE G + LYN
Sbjct: 345 KPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDFILYN 404
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL MCADVG +EA +F DMK SE+C+PDSW++++M+ I G V +A +F EM +
Sbjct: 405 TLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMSK 464
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV--MTQTPKE 335
G E N+ T LIQC GKA DD+V+ + E G+ PDDR CGCLL+V ++Q K+
Sbjct: 465 FGIELNVMGCTCLIQCLGKAMEIDDLVKVFDISVERGVKPDDRLCGCLLSVVSLSQGSKD 524
Query: 336 ELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLC 395
+ K++ C++++N KL ++L+++E+ K+E + ++ +V++ +CNCLID+C
Sbjct: 525 Q-EKVLACLQRANPKLVAFIQLIVDEETSFETVKEEFKAIMSNAVVEVRRPFCNCLIDIC 583
Query: 396 VNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKAL 455
N +L+E A +LL LG Y + +++ +W L +++LS+GAALTAL W+ L+K +
Sbjct: 584 RNKDLVERAHELLYLGTLYGFYPSLHNKTQYEWCLDVRTLSVGAALTALEEWMTTLTKIV 643
Query: 456 ESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
+ E P L TG G HK++ +GL F SHL++L APF S DKVG F+ T+ S
Sbjct: 644 KREEALPDLFLAQTGTGAHKFA-QGLNISFASHLRKLAAPFRQSEDKVGCFIATKEDLIS 702
Query: 516 WLESRSSLVSV 526
W++S S S+
Sbjct: 703 WVQSNSPSASI 713
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 145/351 (41%), Gaps = 32/351 (9%)
Query: 69 KTGSSPKSYIWVNP---KSPRASKLKEK----SYDTRARNEKWRIDPNAFSTLIKLYGTA 121
K S PK WVNP K P S + K SY+ + R + +
Sbjct: 86 KVLSKPKP-TWVNPTKTKRPVLSHQRHKRSSVSYNPQLREFQ------------RFAQRL 132
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE--MTDNGLSPNWN 179
N D + E M + P+ +T N L + + RPWQ ++ T N L
Sbjct: 133 NNCDVSSSDEEFMVCLEEIPSSLTRGNALLVLN-SLRPWQKTHMFFNWIKTQNLLPMETI 191
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
Y +++ R + +M + G++L Y+T+++ D+A FE M
Sbjct: 192 FYNVTMKSLRFGRQFGIIEELAHQMIDGGVELDNITYSTIISCAKKCNLFDKAVYWFERM 251
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ PD TFS+++ + + GKV E +F G++P+ + L + +G+A
Sbjct: 252 YKT-GLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGD 310
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVECVEKSNSKLGYVVKLL 358
D + L + LG+ P+ LL M + K + L E E +S + K L
Sbjct: 311 YDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFE--EMIDSGIAPNEKTL 368
Query: 359 LEEQDIEGD--FKKEATELFNSISKD---VKKAYCNCLIDLCVNLNLLENA 404
I G + K+A EL+ + ++ + N L+++C ++ L+E A
Sbjct: 369 TAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEA 419
>gi|255563768|ref|XP_002522885.1| ATP binding protein, putative [Ricinus communis]
gi|223537870|gb|EEF39485.1| ATP binding protein, putative [Ricinus communis]
Length = 427
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/245 (69%), Positives = 202/245 (82%), Gaps = 2/245 (0%)
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL--GITPDDRFCGCLLNVMTQTPKEEL 337
F+ + + I+ + K + D + + + E GITPD+RFCGCLLNV+TQTPK+EL
Sbjct: 177 FDKEVILYNVTIKVFRKCRDLDRAEKLFDEMLERESGITPDERFCGCLLNVLTQTPKKEL 236
Query: 338 GKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
KL EC+E +N+KLG+VVKLL+ + E +FKKEA ELF+S DVKKAYCNCLIDLCVN
Sbjct: 237 DKLAECIETANTKLGFVVKLLITDAATEANFKKEAAELFDSTGADVKKAYCNCLIDLCVN 296
Query: 398 LNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALES 457
LNLLE AC+LL+LG+ LE+Y DIQSRS TQWSLHLKSLSLGAALTALH+WINDLSKALES
Sbjct: 297 LNLLERACELLDLGIKLEIYADIQSRSSTQWSLHLKSLSLGAALTALHVWINDLSKALES 356
Query: 458 GEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWL 517
G+E PPLLGINTGHGKHKYSDKGLA VFESHLKELNAPFH++ DKVGWFLTT+ AA+SWL
Sbjct: 357 GDELPPLLGINTGHGKHKYSDKGLADVFESHLKELNAPFHEATDKVGWFLTTKVAAESWL 416
Query: 518 ESRSS 522
ESR +
Sbjct: 417 ESRKA 421
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 60/114 (52%), Gaps = 16/114 (14%)
Query: 1 MASNLCYSTCSLFS--------------TPKLGRRTFTFSFQRDDSLSFYSK-TSLQKRS 45
MA NLC S SLF + R R ++ F S+ SL
Sbjct: 1 MAYNLCSSPSSLFQPLCNSLSSSSSSSSSSSSLREPHNPRNFRVTTVPFLSRRASLHITH 60
Query: 46 VSLQETQSSNPTKHSQ-NPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTR 98
VSLQ+ + PT+ N QYP GK GSS KSYIWVNPKSPRAS+LKEKSYD R
Sbjct: 61 VSLQDPITQEPTQQEHANLQYPDGKKGSSSKSYIWVNPKSPRASQLKEKSYDAR 114
>gi|15237467|ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46580, chloroplastic; Flags: Precursor
gi|8885599|dbj|BAA97529.1| unnamed protein product [Arabidopsis thaliana]
gi|332008017|gb|AED95400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 711
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 268/424 (63%), Gaps = 3/424 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA W+ D AFS L K++G AG++DG V +EMK++ VKPN++ YN LL+ MGRA
Sbjct: 281 RAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG 340
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P ++++ EM + GL+PN T +L++ YG+AR+ D L ++ EMK K + LYN
Sbjct: 341 KPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYN 400
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL MCAD+G +EA +F DMK S C+PD++++++M+ I GK +A +F EML+
Sbjct: 401 TLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK 460
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ-TPKEE 336
AG + N+ T L+QC GKA+R DDVV + + G+ PDDR CGCLL+VM E+
Sbjct: 461 AGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSED 520
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCV 396
K++ C+E++N KL V L+++E+ K+E + N+ + ++ +CNCLID+C
Sbjct: 521 AEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICR 580
Query: 397 NLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALE 456
N E A +LL LG +Y + +++ +WSL ++SLS+GAA TAL W+ L+ ++
Sbjct: 581 GNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIK 640
Query: 457 SGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
EE P L TG G H++S +GLA+ F HL++L+APF S D+ G F+ T+ SW
Sbjct: 641 RQEELPELFLAQTGTGTHRFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSW 698
Query: 517 LESR 520
LES+
Sbjct: 699 LESK 702
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 128/297 (43%), Gaps = 16/297 (5%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM GV+ + ITY+ ++ R + ++ M GL P+ TY+++L Y ++
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
E+ LS+Y G + ++ L M + G D + ++MKS + +P+ +
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSM-DVKPNVVVY 329
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++++ GK A ++FNEMLEAG PN LT+L++ YGKA+ D ++ +
Sbjct: 330 NTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 313 LGITPDDRFCGCLLNVMTQTPKEE-----LGKLVECVEKSNSKLGYVVKLLLEEQDIEGD 367
D LLN+ EE + E V+ Y L +I G
Sbjct: 390 KKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAML-----NIYGS 444
Query: 368 FKK--EATELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD 419
K +A ELF + K V C CL+ +++ + +L + V D
Sbjct: 445 GGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
>gi|225427240|ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic [Vitis vinifera]
Length = 723
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/435 (41%), Positives = 274/435 (62%), Gaps = 6/435 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R W+ DP AF+ L K++G AG++DG V +EMK++GV+PN++ YN LL+ MG+A
Sbjct: 294 RGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAG 353
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P +++++EM +G+ P+ T +L++ YG+AR+ D L ++ M+ G + LYN
Sbjct: 354 KPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRSNGWPMDFILYN 413
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL+MCAD+G +EA ++FEDMK SE+C+PDSW++++M+ I G V A +F+EM E
Sbjct: 414 TLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNVDRAMQLFDEMSE 473
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP-KEE 336
G + N+ T L QC G+A+R DD+V+ E G+ PDDR CGCLL+V++ E+
Sbjct: 474 LGVQINVMGCTCLSQCLGRARRIDDLVKVFEVSLERGVKPDDRLCGCLLSVVSFCEGAED 533
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCV 396
K++ C++++N KL V LL E+ E K+E + + + ++ +CNCLID+C
Sbjct: 534 ANKVLACLQQANPKLVAFVNLLEEKISFEA-LKEEFRGILTDTAVEARRPFCNCLIDICR 592
Query: 397 NLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALE 456
N +L E A +LL LG +Y + +R+ +W L ++SLS+GAA TAL W+ LSK ++
Sbjct: 593 NRSLHERAHELLYLGTLYGLYPGLHNRTADEWCLDVRSLSVGAAHTALEEWMGTLSKIVQ 652
Query: 457 SGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
E P NTG G HK+S +GLAS F SH+K+L APF S +K G F+ T SW
Sbjct: 653 REEALPEAFSANTGTGTHKFS-QGLASAFASHVKKLAAPFTQSEEKAGCFVATREDLVSW 711
Query: 517 LESRSSLVSVPAKVT 531
++SR + PA V
Sbjct: 712 VQSR---ILSPAAVV 723
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 12/295 (4%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM + GV+ + ITY+ ++ R + ++ M GL P+ TY+++L Y +
Sbjct: 224 EMISTGVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLG 283
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
E+ LS+Y + G + + L M + G D + ++MKS QP+ +
Sbjct: 284 KVEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSL-GVQPNLVVY 342
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++++ GK A ++F EM+ +G P+ LT+L++ YGKA+ D + R+
Sbjct: 343 NTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRS 402
Query: 313 LGITPDDRFCGCLLNVMTQTP-KEELGKLVECVEKSN----SKLGYVVKLLLEEQDIEGD 367
G D LL++ +EE KL E ++KS Y L + G
Sbjct: 403 NGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGS---GG 459
Query: 368 FKKEATELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD 419
A +LF+ +S+ + C CL +++ K+ E+ L V D
Sbjct: 460 NVDRAMQLFDEMSELGVQINVMGCTCLSQCLGRARRIDDLVKVFEVSLERGVKPD 514
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 80/185 (43%), Gaps = 1/185 (0%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
I YN + ++ ++ ++ + EM G+ + TY++++ R + + +
Sbjct: 200 IFYNVTMKSLRFGRQFQLIEELANEMISTGVELDNITYSTIITCAKRCNLFDKAVKWFER 259
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M + G+ Y+ +L + A +G +E ++E ++S +PD F+ + + G
Sbjct: 260 MYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRAS-GWKPDPIAFAVLGKMFGEAG 318
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
+ EM G +PNL V +L++ GKA + + G+ PD +
Sbjct: 319 DYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLT 378
Query: 324 CLLNV 328
L+ +
Sbjct: 379 ALVKI 383
>gi|297791025|ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309232|gb|EFH39656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/424 (41%), Positives = 268/424 (63%), Gaps = 3/424 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA W+ D AFS L K++G AG++DG V +EMK++ VKPN++ YN LL+ MGRA
Sbjct: 281 RAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG 340
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P ++++ EM + GL+PN T +L++ YG+AR+ +D L ++ EMK K + LYN
Sbjct: 341 KPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAKDALQLWEEMKAKKWPMDFILYN 400
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL MCAD+G +EA +F DMK S C+PD++++++M+ I GK +A +F EMLE
Sbjct: 401 TLLNMCADIGLEEEAERLFNDMKESVQCKPDNFSYTAMLNIYGSGGKAEKAMKLFEEMLE 460
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ-TPKEE 336
AG + N+ T L+QC GKA+R DD+V + + G+ PDDR CGCLL+VM E+
Sbjct: 461 AGVQVNVMGCTCLVQCLGKAKRIDDLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESSED 520
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCV 396
K++ C+E++N KL V L+++E+ K+E + N+ + ++ +CNCLID+C
Sbjct: 521 AEKVMACLERANRKLVTFVNLIVDEKTEFETVKEEFKLVINATQVEARRPFCNCLIDICR 580
Query: 397 NLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALE 456
E A +LL LG +Y + +++ +WSL ++SLS+GAA TAL W+ L+ ++
Sbjct: 581 GKKRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIK 640
Query: 457 SGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
E+ P L TG G H++S +GLA+ F HL++L+APF S D+ G F+ T+ SW
Sbjct: 641 RQEDLPELFLAQTGTGTHRFS-QGLANSFALHLQQLSAPFRQS-DRAGIFVATKEDLVSW 698
Query: 517 LESR 520
LES+
Sbjct: 699 LESK 702
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 156/355 (43%), Gaps = 39/355 (10%)
Query: 72 SSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNF---DGC 127
S PKS +WVNP P+ S L + A + +I D AF+ + + NF
Sbjct: 86 SKPKS-VWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFAQKL----NSSNFTEKSEF 140
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTIYKEMTDNGLSPN----WNTYA 182
L++ +E+ + N + N L R WQ T + + L P +N
Sbjct: 141 LSLLDEIPHPPDRDNALLVLNSL-------REWQKTHTFFNWVKSKNLFPMETIFYNVTM 193
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
LR +GR Y + +++ EM + G++L Y+T++ + D+A E FE M +
Sbjct: 194 KSLR-FGRQFYLIEEMAL--EMVKDGVELDNITYSTIITCAKRCNFYDKAIEWFERMYKT 250
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
PD T+S+++ + S KV E +++ + G++P+ + L + +G+A D
Sbjct: 251 -GLMPDEVTYSAILDVYSKLRKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDG 309
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-----LVECVEKSNSK-LGYVVK 356
+ L + + + P+ LL M + K L + ++E N K L +VK
Sbjct: 310 IRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVK 369
Query: 357 LLLEEQDIEGDFKKEATELFNSISKD---VKKAYCNCLIDLCVNLNLLENACKLL 408
+ + + + K+A +L+ + + N L+++C ++ L E A +L
Sbjct: 370 IYGKAR-----WAKDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLF 419
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 8/188 (4%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E+ ++ + + + D +++ ++ +YG+ G + + ++EEM GV+ N++ L+
Sbjct: 416 ERLFNDMKESVQCKPDNFSYTAMLNIYGSGGKAEKAMKLFEEMLEAGVQVNVMGCTCLVQ 475
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+G+AKR + ++ G+ P+ LL ED V ++ +L
Sbjct: 476 CLGKAKRIDDLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANRKL 535
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
VT N ++ + E F++ + E +P + +I I CRGK A
Sbjct: 536 -VTFVNLIVDEKTEFETVKEEFKLVINATQVEARRPFC---NCLIDI--CRGKKRHERA- 588
Query: 272 FNEMLEAG 279
+E+L G
Sbjct: 589 -HELLYLG 595
>gi|356510655|ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 712
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 184/459 (40%), Positives = 290/459 (63%), Gaps = 7/459 (1%)
Query: 69 KTGSSPK--SYIWVNPKSPRASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
KTG P +Y + R K++E S R R W+ DP FS L K++G AG++D
Sbjct: 252 KTGLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYD 311
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
G V++EM+++GV+PN++ YN LL+ MG+A +P + +++EM ++G+ PN T +++
Sbjct: 312 GIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVI 371
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
+ YG+AR+ D L +++ MKE G + LYNTLL MCADVG +EA +F DMK S +C
Sbjct: 372 KIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHC 431
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+PDSW++++M+ I +G V +A +F+EM + G E N+ T LIQC G+A DD+VR
Sbjct: 432 KPDSWSYTAMLNIYGSQGDVDKAMKLFDEMCKLGVELNVMGFTCLIQCLGRAMEFDDLVR 491
Query: 306 ALNRLPELGITPDDRFCGCLLNV--MTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQD 363
+ E GI PDDR CGCLL+V ++Q +E K++ C++++N KL + L+ +E+
Sbjct: 492 VFDISVERGIKPDDRLCGCLLSVVSLSQGSNDE-EKVLACLQQANPKLVAFIHLIEDEKT 550
Query: 364 IEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSR 423
K+E + ++ + +V++ +CNCLID+C N +LLE A +LL LG +Y + ++
Sbjct: 551 SFETVKEEFKGIMSNAAVEVRRPFCNCLIDICRNKDLLERAHELLYLGTLYGLYPGLHNK 610
Query: 424 SPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYSDKGLAS 483
+ +W L ++SLS+GAALTAL W+ L+K ++ E P L TG G HK++ +GL
Sbjct: 611 TVEEWCLDVRSLSVGAALTALEEWMWTLTKIVKREETLPELFLAQTGTGAHKFA-QGLNI 669
Query: 484 VFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSS 522
F SHL++L APF S +KVG F+ + SW++S+S+
Sbjct: 670 SFASHLRKLAAPFKQSEEKVGCFIASREDLVSWVQSKST 708
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 128/315 (40%), Gaps = 62/315 (19%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDN------------------------------- 172
I YN + ++ K+ ++ + +M DN
Sbjct: 190 IFYNVTMKSLRFGKQFGLIEDLAHQMIDNGVPLDNITYSTIISCAKKCNLYDKAVHWFER 249
Query: 173 ----GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
GL P+ TY+++L Y R E+ +S+Y + G + ++ L M + G
Sbjct: 250 MYKTGLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGD 309
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D +F++M+S QP+ +++++ GK A +F EM+E+G PN LT
Sbjct: 310 YDGIRYVFQEMESV-GVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLT 368
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM--------TQTPKEELGKL 340
++I+ YGKA+ + D + R+ E G D LLN+ +T ++ +
Sbjct: 369 AVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQS 428
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNL 400
V C S S +L +GD K A +LF+ + K L V LN+
Sbjct: 429 VHCKPDSWSYTA-----MLNIYGSQGDVDK-AMKLFDEMCK------------LGVELNV 470
Query: 401 LENACKLLELGLTLE 415
+ C + LG +E
Sbjct: 471 MGFTCLIQCLGRAME 485
>gi|356563451|ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 714
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 174/427 (40%), Positives = 275/427 (64%), Gaps = 4/427 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R W+ DP FS L K++G AG++DG V++EM+++GV+PN++ YN LL+ MG+A
Sbjct: 284 RGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAG 343
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EM + G+ PN T ++++ YG+AR+ D L +++ MKE G + LYN
Sbjct: 344 KPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYN 403
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL MCADVG +EA +F DMK S +C+PDSW++++M+ I +G V +A +FNEM +
Sbjct: 404 TLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLFNEMCK 463
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV--MTQTPKE 335
+G E N+ T LIQC G+A DD+VR E GI PDDR CGCLL+V ++Q +
Sbjct: 464 SGVELNVMGFTCLIQCLGRATEFDDLVRVFGISVERGIKPDDRLCGCLLSVVSLSQGSND 523
Query: 336 ELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLC 395
E K++ C++++N KL + L+ +E+ K+E + ++ + +V++ +CNCLID+C
Sbjct: 524 E-EKVLACLQRANPKLVAFIHLIEDEKSSFESVKEEFKGIMSNAAVEVRRPFCNCLIDIC 582
Query: 396 VNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKAL 455
N +L E A +LL LG +Y + +++ +W L ++SLS+GAALTAL W+ L+K +
Sbjct: 583 RNKDLRERAHELLYLGTLYGLYPGLHNKTDNEWCLDVRSLSVGAALTALEEWMWTLTKIV 642
Query: 456 ESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
+ E P L TG G HK++ +GL F SHL++L APF S +K+G F+ + S
Sbjct: 643 KREETLPELFLAQTGTGAHKFA-QGLNISFASHLRKLAAPFKQSEEKIGCFIASREDLVS 701
Query: 516 WLESRSS 522
W++S+S+
Sbjct: 702 WVQSKST 708
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 150/354 (42%), Gaps = 46/354 (12%)
Query: 72 SSPKSYIWVNPKSPRASKLKEK-------SYDTRARNEKWRIDPNAFSTLIKLYGTAGNF 124
S PKS WVNP + S L + SY + R D F+ KL + +
Sbjct: 90 SKPKS-TWVNPTKAKRSVLSSERQKRATYSYSPQLR------DLKRFAQ--KLNESGSSE 140
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE--MTDNGLSPNWNTYA 182
D L EE+ P I+ N L + K PWQ ++ T N L Y
Sbjct: 141 DAFLACLEEI------PRPISRENALLILNTLK-PWQKTNLFLNWIRTQNLLPMETIFYN 193
Query: 183 SLLRAYGRARYGED---TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
+++ R+G+ + +M + G+ L Y+T+++ D+A FE M
Sbjct: 194 VTMKSL---RFGKQFGLIEELAHQMIDNGVPLDNITYSTIISCAKKCNLYDKAVHWFERM 250
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ + PD T+S+++ + + GKV E +++ G++P+ + L + +G+A
Sbjct: 251 YKT-SLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGD 309
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-----LVECVEKSNSK-LGY 353
D + + +G+ P+ LL M + K + ++E N K L
Sbjct: 310 YDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTA 369
Query: 354 VVKLLLEEQDIEGDFKKEATELFNSISKD---VKKAYCNCLIDLCVNLNLLENA 404
V+K+ + + + ++A EL+ + ++ + N L+++C ++ L+E A
Sbjct: 370 VIKIYGKAR-----WSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEA 418
>gi|449462001|ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
gi|449521148|ref|XP_004167592.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
Length = 710
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/433 (41%), Positives = 271/433 (62%), Gaps = 4/433 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R W DP FS L K++G AG++DG + V +EMK+I ++PN++ YN LLD MG+A
Sbjct: 280 RGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAMGKAG 339
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P ++++ EM ++G++PN T +L++ YG+AR+ D L ++ M+ G + LYN
Sbjct: 340 KPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWERMRSNGWPMDFILYN 399
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL MCAD+G +EA +FE+MK S++ +PDSW++++M+ I G V + +F EMLE
Sbjct: 400 TLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGGNVKRSMELFEEMLE 459
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT-PKEE 336
G E N+ T LIQC GK+ R DD+VR N + GI PDDR CGCLL+V++ E+
Sbjct: 460 LGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCGCLLSVLSLCYNSED 519
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEGD-FKKEATELFNSISKDVKKAYCNCLIDLC 395
+ K+ C++++N KL + LL++ DI + K E + + + ++ +CNCLID+C
Sbjct: 520 INKVFTCLQQANPKLVSFIN-LLQQNDITFEVVKNEFRNILGETAPEARRPFCNCLIDIC 578
Query: 396 VNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKAL 455
N NL E A +LL LG +Y + +++ T+W L ++SLS+GAA TAL W+ LSK +
Sbjct: 579 RNQNLRERAHELLYLGSLYGLYPGLHNKTETEWCLDVRSLSVGAAQTALEEWMITLSKIV 638
Query: 456 ESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
+ E P LL TG G H++S +GLA+ F SH+ +L APF D+ GWF+ T +
Sbjct: 639 QREEALPELLSAQTGAGTHRFS-QGLANSFASHVDKLAAPFQLREDRAGWFVATREDLVT 697
Query: 516 WLESRSSLVSVPA 528
W+ SR V+ A
Sbjct: 698 WVHSRVPSVAATA 710
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++ EM + G++ + ITY+ ++ + R + ++ M GL P+ TY+++L Y
Sbjct: 206 DLANEMISAGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMPDEVTYSAILDVY 265
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
E+ LS+Y + G ++ L M + G D + ++MKS E QP+
Sbjct: 266 ANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIE-MQPN 324
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+++++ GK A ++F+EM+E+G PN LT+L++ YGKA+ D +
Sbjct: 325 LVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWE 384
Query: 309 RLPELGITPDDRFCGCLLNV 328
R+ G D LLN+
Sbjct: 385 RMRSNGWPMDFILYNTLLNM 404
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 160/380 (42%), Gaps = 35/380 (9%)
Query: 37 SKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRAS--KLKEKS 94
S S+ ++ SL E + T N + S PKS WVNP P+ S L+ +
Sbjct: 50 SSQSVDNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKS-TWVNPTKPKRSVLSLQRQK 108
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC-LNVYEEMKAIGVKPNMITYNNLLDTM 153
+ + N K R D +F+ KL + D + EE+ K N + N L
Sbjct: 109 RSSYSYNPKMR-DLKSFAH--KLNACDSSDDASFIAALEEIPHPPTKENALLILNSL--- 162
Query: 154 GRAKRPWQ-VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED---TLSVYREMKEKGM 209
RPWQ + + L P + ++ A RYG + EM G+
Sbjct: 163 ----RPWQKTHLFFNWIKSQNLFPMETIFYNV--AMKSLRYGRQFQLIEDLANEMISAGI 216
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+L Y+T++ D+A E FE M + PD T+S+++ + + GKV E
Sbjct: 217 ELDNITYSTIITCAKKCSRFDKAMEWFERMYKT-GLMPDEVTYSAILDVYANLGKVEEVL 275
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+++ +G+ P+ + + L + +G+A D ++ L + + + P+ LL+ M
Sbjct: 276 SLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVLQEMKSIEMQPNLVVYNTLLDAM 335
Query: 330 TQTPKEELGK-----LVECVEKSNSK-LGYVVKLLLEEQDIEGDFKKEATELFNSISKD- 382
+ K + +VE N K L +VK+ + + + ++A +L+ + +
Sbjct: 336 GKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKAR-----WARDALDLWERMRSNG 390
Query: 383 --VKKAYCNCLIDLCVNLNL 400
+ N L+++C +L L
Sbjct: 391 WPMDFILYNTLLNMCADLGL 410
>gi|219884651|gb|ACL52700.1| unknown [Zea mays]
Length = 716
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 259/433 (59%), Gaps = 8/433 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V++EM+ +G+KPN+ YN LL+ +G+
Sbjct: 283 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTG 342
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EM D G+ PN T +L + YGRAR+G D L ++ +M+E + L N
Sbjct: 343 KPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCN 402
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQ----PDSWTFSSMITICSCRGKVSEAEAMFN 273
TLL+MCADVG EA ++F +MK E C+ PD W++++MI I G A +F
Sbjct: 403 TLLSMCADVGLVAEAEQLFNEMKGPE-CRDVPKPDKWSYTAMINIYGSNGDTDSALQLFA 461
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
EML+ G EPN+ T +IQC GKA+R V L E G+ PDDR CGCLL+V+ +
Sbjct: 462 EMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLSVIALSS 521
Query: 334 KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+ ++ +EK N L ++++L + Q D +E + NS + +V++ YCNCLID
Sbjct: 522 GEEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGDDITEELKSVLNSAAPEVRRPYCNCLID 581
Query: 394 LCVNLNL-LENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
+C N + A ++ L T +Y+ +QSR +WSL L+SLS+GAA TA W+ +S
Sbjct: 582 VCRNHGFPPQRAREVFHLAQTYGLYSKLQSRKDEEWSLDLRSLSVGAAKTAFDDWMQTVS 641
Query: 453 KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
+ ++ P + TG HK++ +GLAS F +HL ++ PFH S + G F+++
Sbjct: 642 ERWAQQKDLPESFSVYTGSSTHKFA-QGLASAFAAHLDQMAVPFHASESQAGSFISSRDD 700
Query: 513 AKSWLE-SRSSLV 524
SWL+ SRSS V
Sbjct: 701 LVSWLQMSRSSAV 713
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 113/268 (42%), Gaps = 36/268 (13%)
Query: 172 NGLSPNWNTYASLL---RAYGRARYGEDTL-------------------SVYREMKEKGM 209
N L P+W SLL RA + DT+ + +M + G+
Sbjct: 159 NYLHPSWRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGV 218
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
L Y+TL+ +A E FE M +++ PD T+S+++ + + G E
Sbjct: 219 PLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVL 278
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
A+F+ +G++P+ L + +G+A D + + E+GI P+ LL +
Sbjct: 279 ALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEAL 338
Query: 330 TQTPKEELGK------LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK-- 381
+T K L + + + VE + L + K+ + + ++A +L++ + +
Sbjct: 339 GKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRAR-----WGRDALQLWDKMRELK 393
Query: 382 -DVKKAYCNCLIDLCVNLNLLENACKLL 408
CN L+ +C ++ L+ A +L
Sbjct: 394 LPADSILCNTLLSMCADVGLVAEAEQLF 421
>gi|212274745|ref|NP_001130291.1| uncharacterized protein LOC100191385 [Zea mays]
gi|194688762|gb|ACF78465.1| unknown [Zea mays]
gi|223949231|gb|ACN28699.1| unknown [Zea mays]
gi|414874010|tpg|DAA52567.1| TPA: salt-inducible protein [Zea mays]
Length = 716
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 259/433 (59%), Gaps = 8/433 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V++EM+ +G+KPN+ YN LL+ +G+
Sbjct: 283 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTG 342
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EM D G+ PN T +L + YGRAR+G D L ++ +M+E + L N
Sbjct: 343 KPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCN 402
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQ----PDSWTFSSMITICSCRGKVSEAEAMFN 273
TLL+MCADVG EA ++F +MK E C+ PD W++++MI I G A +F
Sbjct: 403 TLLSMCADVGLVAEAEQLFNEMKDPE-CRDVPKPDKWSYTAMINIYGSNGDTDSALQLFA 461
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
EML+ G EPN+ T +IQC GKA+R V L E G+ PDDR CGCLL+V+ +
Sbjct: 462 EMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLSVIALSS 521
Query: 334 KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+ ++ +EK N L ++++L + Q D +E + NS + +V++ YCNCLID
Sbjct: 522 GEEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGDDITEELKSVLNSAAPEVRRPYCNCLID 581
Query: 394 LCVNLNL-LENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
+C N + A ++ L T +Y+ +QSR +WSL L+SLS+GAA TA W+ +S
Sbjct: 582 VCRNHGFPPQRAREVFHLAQTYGLYSKLQSRKDEEWSLDLRSLSVGAAKTAFDDWMQTVS 641
Query: 453 KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
+ ++ P + TG HK++ +GLAS F +HL ++ PFH S + G F+++
Sbjct: 642 ERWAQQKDLPESFSVYTGSSTHKFA-QGLASAFAAHLDQMAVPFHASESQAGSFISSRDD 700
Query: 513 AKSWLE-SRSSLV 524
SWL+ SRSS V
Sbjct: 701 LVSWLQMSRSSAV 713
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 113/268 (42%), Gaps = 36/268 (13%)
Query: 172 NGLSPNWNTYASLL---RAYGRARYGEDTL-------------------SVYREMKEKGM 209
N L P+W SLL RA + DT+ + +M + G+
Sbjct: 159 NYLHPSWRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGV 218
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
L Y+TL+ +A E FE M +++ PD T+S+++ + + G E
Sbjct: 219 PLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVL 278
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
A+F+ +G++P+ L + +G+A D + + E+GI P+ LL +
Sbjct: 279 ALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEAL 338
Query: 330 TQTPKEELGK------LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK-- 381
+T K L + + + VE + L + K+ + + ++A +L++ + +
Sbjct: 339 GKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRAR-----WGRDALQLWDKMRELK 393
Query: 382 -DVKKAYCNCLIDLCVNLNLLENACKLL 408
CN L+ +C ++ L+ A +L
Sbjct: 394 LPADSILCNTLLSMCADVGLVAEAEQLF 421
>gi|224031359|gb|ACN34755.1| unknown [Zea mays]
Length = 504
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 259/433 (59%), Gaps = 8/433 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V++EM+ +G+KPN+ YN LL+ +G+
Sbjct: 71 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTG 130
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EM D G+ PN T +L + YGRAR+G D L ++ +M+E + L N
Sbjct: 131 KPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCN 190
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQ----PDSWTFSSMITICSCRGKVSEAEAMFN 273
TLL+MCADVG EA ++F +MK E C+ PD W++++MI I G A +F
Sbjct: 191 TLLSMCADVGLVAEAEQLFNEMKDPE-CRDVPKPDKWSYTAMINIYGSNGDTDSALQLFA 249
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
EML+ G EPN+ T +IQC GKA+R V L E G+ PDDR CGCLL+V+ +
Sbjct: 250 EMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLSVIALSS 309
Query: 334 KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+ ++ +EK N L ++++L + Q D +E + NS + +V++ YCNCLID
Sbjct: 310 GEEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGDDITEELKSVLNSAAPEVRRPYCNCLID 369
Query: 394 LCVNLNL-LENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
+C N + A ++ L T +Y+ +QSR +WSL L+SLS+GAA TA W+ +S
Sbjct: 370 VCRNHGFPPQRAREVFHLAQTYGLYSKLQSRKDEEWSLDLRSLSVGAAKTAFDDWMQTVS 429
Query: 453 KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
+ ++ P + TG HK++ +GLAS F +HL ++ PFH S + G F+++
Sbjct: 430 ERWAQQKDLPESFSVYTGSSTHKFA-QGLASAFAAHLDQMAVPFHASESQAGSFISSRDD 488
Query: 513 AKSWLE-SRSSLV 524
SWL+ SRSS V
Sbjct: 489 LVSWLQMSRSSAV 501
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M + G+ L Y+TL+ +A E FE M +++ PD T+S+++ + + G
Sbjct: 1 MLDAGVPLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLG 60
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
E A+F+ +G++P+ L + +G+A D + + E+GI P+
Sbjct: 61 MKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYN 120
Query: 324 CLLNVMTQTPKEELGK------LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFN 377
LL + +T K L + + + VE + L + K+ + + ++A +L++
Sbjct: 121 ALLEALGKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRAR-----WGRDALQLWD 175
Query: 378 SISK---DVKKAYCNCLIDLCVNLNLLENACKLL 408
+ + CN L+ +C ++ L+ A +L
Sbjct: 176 KMRELKLPADSILCNTLLSMCADVGLVAEAEQLF 209
>gi|363543445|ref|NP_001241732.1| salt-inducible protein [Zea mays]
gi|195610062|gb|ACG26861.1| salt-inducible protein [Zea mays]
Length = 716
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 257/433 (59%), Gaps = 8/433 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V++EM+ +G+KPN+ YN LL+ +G+
Sbjct: 283 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTG 342
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EM D G+ PN T +L + YGRAR+G D L ++ +M+E + L N
Sbjct: 343 KPGLARNLFEEMIDQGVEPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADSILCN 402
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQ----PDSWTFSSMITICSCRGKVSEAEAMFN 273
TLL+MCADVG EA ++F +MK E C+ PD W++++MI I G A +F
Sbjct: 403 TLLSMCADVGLVAEAEQLFNEMKDPE-CRDVPKPDKWSYTAMINIYGSNGDTDSALQLFA 461
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
EML+ G EPN+ T +IQC GKA R V L E G+ PDDR CGCLL+V+ +
Sbjct: 462 EMLKGGIEPNIMSYTIVIQCLGKAHRIQQAVEVLESGLEKGLKPDDRLCGCLLSVIALSS 521
Query: 334 KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+ ++ +EK N L ++++L + Q D KE + N + +V++ YCNCLID
Sbjct: 522 GEEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGYDITKELKSVLNGAAPEVRRPYCNCLID 581
Query: 394 LCVNLNL-LENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
+C N + A ++ L T +Y+ +QSR +WSL L+SLS+GAA TA W+ +S
Sbjct: 582 VCRNHGFPPQRAREVFHLAQTYGLYSKLQSRKDEEWSLDLRSLSVGAAKTAFDDWMQTVS 641
Query: 453 KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
+ ++ P + TG HK++ +GLAS F +HL ++ PFH S + G F+++
Sbjct: 642 ERWAQQKDLPESFSVYTGSSTHKFA-QGLASAFAAHLDQMAVPFHASESQAGSFISSRDD 700
Query: 513 AKSWLE-SRSSLV 524
SWL+ SRSS V
Sbjct: 701 LVSWLQMSRSSAV 713
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 113/268 (42%), Gaps = 36/268 (13%)
Query: 172 NGLSPNWNTYASLL---RAYGRARYGEDTL-------------------SVYREMKEKGM 209
N L P+W SLL RA + DT+ + +M + G+
Sbjct: 159 NYLHPSWRKSLSLLAWLRALPAGAFPLDTIFFNVALKSLRAARQWPHAERLALDMLDAGV 218
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
L Y+TL+ +A E FE M +++ PD T+S+++ + + G E
Sbjct: 219 PLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVL 278
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
A+F+ +G++P+ L + +G+A D + + E+GI P+ LL +
Sbjct: 279 ALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEAL 338
Query: 330 TQTPKEELGK------LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK-- 381
+T K L + + + VE + L + K+ + + ++A +L++ + +
Sbjct: 339 GKTGKPGLARNLFEEMIDQGVEPNARTLTALAKIYGRAR-----WGRDALQLWDKMRELK 393
Query: 382 -DVKKAYCNCLIDLCVNLNLLENACKLL 408
CN L+ +C ++ L+ A +L
Sbjct: 394 LPADSILCNTLLSMCADVGLVAEAEQLF 421
>gi|242037347|ref|XP_002466068.1| hypothetical protein SORBIDRAFT_01g000640 [Sorghum bicolor]
gi|241919922|gb|EER93066.1| hypothetical protein SORBIDRAFT_01g000640 [Sorghum bicolor]
Length = 722
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 256/430 (59%), Gaps = 7/430 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG+++G V++EM +G+KPN+ YN LL+ +G+
Sbjct: 289 RARGSGWKPDHVAFAVLAKMFGEAGDYEGIQFVFKEMTEVGIKPNIFVYNALLEALGKTG 348
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EM + G+ PN T +L + YGRAR+G D L ++ +M+E + L N
Sbjct: 349 KPGLARNLFEEMVEQGVDPNARTLTALAKIYGRARWGRDALQLWDKMRELKLPADNILCN 408
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQ----PDSWTFSSMITICSCRGKVSEAEAMFN 273
TLL+MCADVG +EA ++F +MK E C+ PD W++++MI I G A +F
Sbjct: 409 TLLSMCADVGLVNEAEQLFNEMKDPE-CRDVPKPDKWSYTAMINIYGSNGDTDRALQLFG 467
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
EML+ G EPN+ T +IQC GKAQR V L E G+ PDDR CGCLL+V+ +
Sbjct: 468 EMLKGGIEPNIMSYTIVIQCLGKAQRIQQAVEVLEAGLEKGLKPDDRLCGCLLSVIALSS 527
Query: 334 KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
EE+ ++ ++K N L ++++L + Q D KE + N+ + +V++ YCNCLID
Sbjct: 528 GEEMEIVLSSLQKFNQNLVKLIRVLSDAQVGADDITKELKSVLNAAAPEVRRPYCNCLID 587
Query: 394 LCVNLNL-LENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
+C N + A ++ L T +YT +QSR +WSL L+SLS+GAA TA W+ +S
Sbjct: 588 VCRNHGFPPQRAREVFHLAQTYGLYTKLQSRKDEEWSLDLRSLSVGAAKTAFDDWMQTVS 647
Query: 453 KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
+ + P + TG HK++ +GLAS F +HL+++ PFH S + G F+++
Sbjct: 648 ERWVQQKALPESFSVYTGSSTHKFA-QGLASAFAAHLEQMAVPFHASESQAGSFISSRDD 706
Query: 513 AKSWLESRSS 522
SWL+ SS
Sbjct: 707 LVSWLQMSSS 716
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 32/266 (12%)
Query: 172 NGLSPNWNTYASLL---RAYGRARYGEDTL-------------------SVYREMKEKGM 209
N L P+W SLL RA + DT+ + +M + G+
Sbjct: 165 NYLHPSWRKTLSLLAWLRALPAGAFQLDTIFFNVALKSLRAARQWPHAERLALDMLDAGV 224
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
L Y+TL+ +A E FE M +++ PD T+S+++ + + G E
Sbjct: 225 PLDNITYSTLITAARRCRQFAKAVEWFERMYAADGVLPDEVTYSAVLDVYAQLGMKEEVL 284
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
A+F+ +G++P+ L + +G+A + + + E+GI P+ LL +
Sbjct: 285 ALFDRARGSGWKPDHVAFAVLAKMFGEAGDYEGIQFVFKEMTEVGIKPNIFVYNALLEAL 344
Query: 330 TQTPKEELGK--LVECVEKSNSKLGYVVKLLLEEQDIEGDFK--KEATELFNSISK---D 382
+T K L + E VE+ + L + I G + ++A +L++ + +
Sbjct: 345 GKTGKPGLARNLFEEMVEQGVDPNARTLTALAK---IYGRARWGRDALQLWDKMRELKLP 401
Query: 383 VKKAYCNCLIDLCVNLNLLENACKLL 408
CN L+ +C ++ L+ A +L
Sbjct: 402 ADNILCNTLLSMCADVGLVNEAEQLF 427
>gi|326518288|dbj|BAJ88173.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527987|dbj|BAJ89045.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 250/426 (58%), Gaps = 5/426 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V++EM+ +G KPN+ YN LL+ +G+
Sbjct: 272 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTG 331
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EMT G+ PN T ++ + YGRAR+G D L ++ +M+EK + L N
Sbjct: 332 KPGLARNLFEEMTAEGVEPNARTLTAVAKIYGRARWGRDALQLWDQMREKKIPADSILCN 391
Query: 218 TLLAMCADVGYTDEAFEIFEDMKS---SENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
TLL+MCADVG EA ++FE+MK ++ QPD W++++MI I A +F E
Sbjct: 392 TLLSMCADVGLVAEAEQLFEEMKDPDLTDVPQPDKWSYTAMINIYGSIKDADRALQLFVE 451
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
ML++G E N+ T +IQC GKA R D V L E G+ PDDR CGCLL+V+ +
Sbjct: 452 MLQSGIEANIMSYTIVIQCLGKANRIRDAVEVLEAGLERGLKPDDRLCGCLLSVVALSTG 511
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EE ++ C+EK N L ++++L ++Q + K++ + N+ DV++ YCNCLID+
Sbjct: 512 EETELVLACLEKFNRNLVKLIRMLGDDQVGADELKEQLKAVLNAAETDVRRPYCNCLIDI 571
Query: 395 CVNLNL-LENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
C N L +L L +Y+ + R +W L L+SLS+GAA TA W+ L +
Sbjct: 572 CQNHGLPARRPRELFRLAQGYGLYSKLHIRKDDEWLLDLRSLSVGAAKTAFDDWMAALKE 631
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAA 513
G+ P + TG HK++ +GLAS F +HL+E APF S +VG F+++
Sbjct: 632 RAVQGQTLPQSFNVFTGSSTHKFA-QGLASAFAAHLEEAAAPFRPSESQVGSFVSSRDEL 690
Query: 514 KSWLES 519
WL++
Sbjct: 691 VLWLQT 696
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 138/326 (42%), Gaps = 55/326 (16%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPW-QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
G + I +N L ++ RA R W + + + +M D+G+ + TY++L+ A R R
Sbjct: 170 GFAVDTILFNVALKSL-RAARRWDEAERLALDMVDSGVPLDNITYSTLITAARRCRQFAK 228
Query: 197 TLSVYREMKEKGMQL---SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ + M G + VT Y+ +L + A + +E +F+ + S +PD F+
Sbjct: 229 AVEWFERMYSPGSAVLPDEVT-YSAVLDVYAQLRMKEEVLALFDRARGS-GWKPDHVAFA 286
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ + G + +F EM E G +PN+FV +L++ GK +
Sbjct: 287 VLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKP------------- 333
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT 373
G N+ EE+ E VE + L V K+ + + ++A
Sbjct: 334 ---------GLARNLF-----EEMT--AEGVEPNARTLTAVAKIYGRAR-----WGRDAL 372
Query: 374 ELFNSISKDVKKA---YCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSL 430
+L++ + + A CN L+ +C ++ L+ A +L E + TD+ P +WS
Sbjct: 373 QLWDQMREKKIPADSILCNTLLSMCADVGLVAEAEQLFE-EMKDPDLTDVP--QPDKWSY 429
Query: 431 HLKSLSLGAALTALHIWINDLSKALE 456
A+ ++ I D +AL+
Sbjct: 430 --------TAMINIYGSIKDADRALQ 447
>gi|326495542|dbj|BAJ85867.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 250/426 (58%), Gaps = 5/426 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V++EM+ +G KPN+ YN LL+ +G+
Sbjct: 272 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTG 331
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EMT G+ PN T ++ + YGRAR+G D L ++ +M+EK + L N
Sbjct: 332 KPGLARNLFEEMTAEGVEPNARTLTAVAKIYGRARWGRDALQLWDQMREKKIPADSILCN 391
Query: 218 TLLAMCADVGYTDEAFEIFEDMKS---SENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
TLL+MCADVG EA ++FE+MK ++ QPD W++++MI I A +F E
Sbjct: 392 TLLSMCADVGLVAEAEQLFEEMKDPDLTDVPQPDKWSYTAMINIYGSIKDADRALQLFVE 451
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
ML++G E N+ T +IQC GKA R D V L E G+ PDDR CGCLL+V+ +
Sbjct: 452 MLQSGIEANIMSYTIVIQCLGKANRIRDAVEMLEAGLERGLKPDDRLCGCLLSVVALSTG 511
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
EE ++ C+EK N L ++++L ++Q + K++ + N+ DV++ YCNCLID+
Sbjct: 512 EETELVLACLEKFNRNLVKLIRMLGDDQVGADELKEQLKAVLNAAETDVRRPYCNCLIDI 571
Query: 395 CVNLNL-LENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
C N L +L L +Y+ + R +W L L+SLS+GAA TA W+ L +
Sbjct: 572 CQNHGLPARRPRELFRLAQGYGLYSKLHIRKDDEWLLDLRSLSVGAAKTAFDDWMAALKE 631
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAA 513
G+ P + TG HK++ +GLAS F +HL+E APF S +VG F+++
Sbjct: 632 RAVQGQTLPQSFNVFTGSSTHKFA-QGLASAFAAHLEEAAAPFRPSESQVGSFVSSRDEL 690
Query: 514 KSWLES 519
WL++
Sbjct: 691 VLWLQT 696
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 138/326 (42%), Gaps = 55/326 (16%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPW-QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
G + I +N L ++ RA R W + + + +M D+G+ + TY++L+ A R R
Sbjct: 170 GFAVDTILFNVALKSL-RAARRWDEAERLALDMVDSGVPLDNITYSTLITAARRCRQFAK 228
Query: 197 TLSVYREMKEKGMQL---SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ + M G + VT Y+ +L + A + +E +F+ + S +PD F+
Sbjct: 229 AVEWFERMYSPGSAVLPDEVT-YSAVLDVYAQLRMKEEVLALFDRARGS-GWKPDHVAFA 286
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ + G + +F EM E G +PN+FV +L++ GK +
Sbjct: 287 VLAKMFGEAGDYDGIQFVFKEMREVGTKPNIFVYNALLEALGKTGKP------------- 333
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT 373
G N+ EE+ E VE + L V K+ + + ++A
Sbjct: 334 ---------GLARNLF-----EEMT--AEGVEPNARTLTAVAKIYGRAR-----WGRDAL 372
Query: 374 ELFNSISKDVKKA---YCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSL 430
+L++ + + A CN L+ +C ++ L+ A +L E + TD+ P +WS
Sbjct: 373 QLWDQMREKKIPADSILCNTLLSMCADVGLVAEAEQLFE-EMKDPDLTDVP--QPDKWSY 429
Query: 431 HLKSLSLGAALTALHIWINDLSKALE 456
A+ ++ I D +AL+
Sbjct: 430 --------TAMINIYGSIKDADRALQ 447
>gi|218194139|gb|EEC76566.1| hypothetical protein OsI_14394 [Oryza sativa Indica Group]
Length = 701
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 252/429 (58%), Gaps = 8/429 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V++EM+ +G+KPN+ YN LL+ +G+
Sbjct: 271 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTG 330
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EMT G+ PN T +L + YGRAR+G D L ++ +M+EK + L N
Sbjct: 331 KPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCN 390
Query: 218 TLLAMCADVGYTDEAFEIFEDMKS---SENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
TLL+MCADVG EA ++F +MK + +PD W++++MI I G A +F E
Sbjct: 391 TLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAE 450
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+E+G EPN+ T +IQC GKA R + V L G+ PDDR CGCLL+V+ +
Sbjct: 451 MVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSG 510
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
+E ++ C+EK S L ++++L + + D + E + NS + +V++ YCNCLID+
Sbjct: 511 DETEVILACLEKVRSNLVKLIRMLGDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDI 570
Query: 395 CVNLNLL-ENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
C N E A +L L +Y+ I +R +WSL L+SLS+GAA TA W+ +
Sbjct: 571 CRNHGYPSERAVELFRLARHYGLYSKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKTIR- 629
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAA 513
E E P + TG HK++ +GLA+ SHL+++ APF S ++G F+++
Sbjct: 630 --EHEEALPQTFSVYTGSSTHKFA-QGLATAVASHLEQVGAPFRASDSQLGSFISSRDDL 686
Query: 514 KSWLESRSS 522
SWL + S
Sbjct: 687 LSWLHTTMS 695
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 36/268 (13%)
Query: 172 NGLSPNWNTYASLL---RAYGRARYGEDTL-------------------SVYREMKEKGM 209
N L P+W SLL RA + DT+ + +M G+
Sbjct: 147 NYLHPSWRKSLSLLCWLRALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGV 206
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
L Y+TL+ D+A E FE M +S+ PD T+S+++ + + G E
Sbjct: 207 PLDNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVL 266
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
A+F+ +G++P+ L + +G+A D + + E+GI P+ LL +
Sbjct: 267 ALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEAL 326
Query: 330 TQTPKEELGK------LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDV 383
+T K L + E VE + L + K+ + + ++A +L+ + +
Sbjct: 327 GKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRAR-----WGRDALQLWEQMREKK 381
Query: 384 KKA---YCNCLIDLCVNLNLLENACKLL 408
A CN L+ +C ++ L+ A +L
Sbjct: 382 LPADNILCNTLLSMCADVGLVGEAEQLF 409
>gi|115456691|ref|NP_001051946.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|41393252|gb|AAS01975.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|113550417|dbj|BAF13860.1| Os03g0856100 [Oryza sativa Japonica Group]
gi|222626198|gb|EEE60330.1| hypothetical protein OsJ_13428 [Oryza sativa Japonica Group]
Length = 640
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 253/429 (58%), Gaps = 6/429 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V++EM+ +G+KPN+ YN LL+ +G+
Sbjct: 208 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTG 267
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EMT G+ PN T +L + YGRAR+G D L ++ +M+EK + L N
Sbjct: 268 KPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCN 327
Query: 218 TLLAMCADVGYTDEAFEIFEDMKS---SENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
TLL+MCADVG EA ++F +MK + +PD W++++MI I G A +F E
Sbjct: 328 TLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAE 387
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+E+G EPN+ T +IQC GKA R + V L G+ PDDR CGCLL+V+ +
Sbjct: 388 MVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSG 447
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
+E ++ C+EK S L ++++L + + D + E + NS + +V++ YCNCLID+
Sbjct: 448 DETEVILACLEKVRSNLVKLIRMLGDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDI 507
Query: 395 CVNLNLL-ENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
C N E A +L L +Y+ I +R +WSL L+SLS+GAA TA W+ + +
Sbjct: 508 CRNHGYPSERAVELFRLARHYGLYSKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKTIRE 567
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAA 513
E E P + TG HK++ +GLA+ SHL+++ APF S ++G F+++
Sbjct: 568 H-EEEEALPQTFSVYTGSSTHKFA-QGLATAVASHLEQVGAPFRASDSQLGSFISSRDDL 625
Query: 514 KSWLESRSS 522
SWL + S
Sbjct: 626 LSWLHTTMS 634
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 14/215 (6%)
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+M G+ L Y+TL+ D+A E FE M +S+ PD T+S+++ + +
Sbjct: 137 DMLASGVPLDNITYSTLITAARRCRQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQL 196
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
G E A+F+ +G++P+ L + +G+A D + + E+GI P+
Sbjct: 197 GMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVY 256
Query: 323 GCLLNVMTQTPKEELGK------LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF 376
LL + +T K L + E VE + L + K+ + + ++A +L+
Sbjct: 257 NALLEALGKTGKPGLARNLFEEMTAEGVEPNARTLTALAKIYGRAR-----WGRDALQLW 311
Query: 377 NSISKDVKKA---YCNCLIDLCVNLNLLENACKLL 408
+ + A CN L+ +C ++ L+ A +L
Sbjct: 312 EQMREKKLPADNILCNTLLSMCADVGLVGEAEQLF 346
>gi|357114648|ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Brachypodium distachyon]
Length = 875
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 247/426 (57%), Gaps = 5/426 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V+ EM+ +G+KPN+ YN LL+ +G+
Sbjct: 269 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFREMREVGIKPNIFVYNALLEALGKTG 328
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P +++++EMT G+ PN T ++ + YGRAR+G D L ++ +M++K + L N
Sbjct: 329 KPGLARSLFEEMTAEGVEPNARTLTAVAKIYGRARWGRDALQLWEQMRQKKIPADSILCN 388
Query: 218 TLLAMCADVGYTDEAFEIFEDMKS---SENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
TLL+MCADVG EA ++FE+MK S+ +PD W++++MI I A +F E
Sbjct: 389 TLLSMCADVGLVAEAEQLFEEMKDPELSDVPKPDKWSYTAMINIYGSIKDADRALQLFAE 448
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
ML G EPN+ T +IQC GK R D L E G+ PDDR CGCLL+V+ +
Sbjct: 449 MLAEGIEPNIMSYTIVIQCLGKTNRIQDAAEVLEAGLERGLKPDDRLCGCLLSVVALSSG 508
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
+E ++ C+EK N L +++LL + Q + K+E + N+ +V++ YCNCLID+
Sbjct: 509 DETELMLACLEKVNRNLVKLIRLLGDAQVGVDELKEELKAVLNAADSEVRRPYCNCLIDI 568
Query: 395 CVNLNL-LENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
C N + +L L +Y+ + R +W L L+SLS+GAA TA W+ +S+
Sbjct: 569 CQNHGFPAHRSGELFHLAQHYGLYSKLHIRKDEEWLLDLRSLSVGAAKTAFDDWMKTISE 628
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAA 513
G+ P + TG HK++ +GLAS F HL+E PF S +VG F+++
Sbjct: 629 RSAQGKPLPEFFNVFTGSSTHKFA-QGLASAFAVHLEETAVPFRPSESQVGSFVSSRDDL 687
Query: 514 KSWLES 519
SWL++
Sbjct: 688 VSWLQT 693
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS--SENCQPDSWTFSSMITICS 260
+M G+ L Y+TL+ +A E FE M S PD T+S+++ + +
Sbjct: 196 DMVASGVPLDNITYSTLITAARRCRQFAKAVEWFERMYSPGGGGVLPDEVTYSAVLDVYA 255
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
E A+F+ +G++P+ L + +G+A D + + E+GI P+
Sbjct: 256 QLRMKEEVLALFDRARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFREMREVGIKPNIF 315
Query: 321 FCGCLLNVMTQTPKEELGK------LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATE 374
LL + +T K L + E VE + L V K+ + + ++A +
Sbjct: 316 VYNALLEALGKTGKPGLARSLFEEMTAEGVEPNARTLTAVAKIYGRAR-----WGRDALQ 370
Query: 375 LFNSISKDVKKA---YCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLH 431
L+ + + A CN L+ +C ++ L+ A +L E E+ +D+ P +WS
Sbjct: 371 LWEQMRQKKIPADSILCNTLLSMCADVGLVAEAEQLFEEMKDPEL-SDVP--KPDKWSY- 426
Query: 432 LKSLSLGAALTALHIWINDLSKALE 456
A+ ++ I D +AL+
Sbjct: 427 -------TAMINIYGSIKDADRALQ 444
>gi|41393251|gb|AAS01974.1| putative chloroplastic RNA-binding protein, with alternative
splicing isoforms [Oryza sativa Japonica Group]
gi|108712189|gb|ABF99984.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 884
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/434 (37%), Positives = 253/434 (58%), Gaps = 16/434 (3%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR W+ D AF+ L K++G AG++DG V++EM+ +G+KPN+ YN LL+ +G+
Sbjct: 268 RARGSGWKPDHVAFAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTG 327
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + +++EMT G+ PN T +L + YGRAR+G D L ++ +M+EK + L N
Sbjct: 328 KPGLARNLFEEMTAEGVEPNARTLTALAKIYGRARWGRDALQLWEQMREKKLPADNILCN 387
Query: 218 TLLAMCADVGYTDEAFEIFEDMKS---SENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
TLL+MCADVG EA ++F +MK + +PD W++++MI I G A +F E
Sbjct: 388 TLLSMCADVGLVGEAEQLFSEMKDPDLGDVPKPDKWSYTAMINIYGSSGDADRALQLFAE 447
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M+E+G EPN+ T +IQC GKA R + V L G+ PDDR CGCLL+V+ +
Sbjct: 448 MVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSG 507
Query: 335 EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
+E ++ C+EK S L ++++L + + D + E + NS + +V++ YCNCLID+
Sbjct: 508 DETEVILACLEKVRSNLVKLIRMLGDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDI 567
Query: 395 CVNLNLL-ENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
C N E A +L L +Y+ I +R +WSL L+SLS+GAA TA W+ + +
Sbjct: 568 CRNHGYPSERAVELFRLARHYGLYSKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKTIRE 627
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAA 513
E E P + TG HK++ +GLA+ SHL+++ APF S ++G F++
Sbjct: 628 H-EEEEALPQTFSVYTGSSTHKFA-QGLATAVASHLEQVGAPFRASDSQLGSFIS----- 680
Query: 514 KSWLESRSSLVSVP 527
SR L+S P
Sbjct: 681 -----SRDDLLSCP 689
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 14/251 (5%)
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + D + + L++ AR + +M G+ L Y+TL+
Sbjct: 161 RALPDGAFPLDTIVFNVALKSLRAARQWPQAERLALDMLASGVPLDNITYSTLITAARRC 220
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D+A E FE M +S+ PD T+S+++ + + G E A+F+ +G++P+
Sbjct: 221 RQFDKAVEWFERMYASDGVLPDEVTYSAILDVYAQLGMKEEVLALFDRARGSGWKPDHVA 280
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK------L 340
L + +G+A D + + E+GI P+ LL + +T K L +
Sbjct: 281 FAVLAKMFGEAGDYDGIQFVFKEMREVGIKPNIFVYNALLEALGKTGKPGLARNLFEEMT 340
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA---YCNCLIDLCVN 397
E VE + L + K+ + + ++A +L+ + + A CN L+ +C +
Sbjct: 341 AEGVEPNARTLTALAKIYGRAR-----WGRDALQLWEQMREKKLPADNILCNTLLSMCAD 395
Query: 398 LNLLENACKLL 408
+ L+ A +L
Sbjct: 396 VGLVGEAEQLF 406
>gi|297736720|emb|CBI25756.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 142/184 (77%), Positives = 161/184 (87%)
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
K S NC PDSWTFSS+ITI SC GKV EAEAM N MLEAGFEPN+FVLTSLIQCYGKA R
Sbjct: 4 KGSGNCMPDSWTFSSLITIYSCSGKVPEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANR 63
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLL 359
TD+VVR +RL EL ITPDDRFCGC+LNVMTQ+PKEELGKL++C++K+N KLG VVKLLL
Sbjct: 64 TDEVVRTFDRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCIDKANPKLGNVVKLLL 123
Query: 360 EEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD 419
EEQ+ EG F+KEA+ELF+SIS DVKKAYCNCLIDLCVNLNLLE AC+L +LGLTLE+Y D
Sbjct: 124 EEQNGEGTFRKEASELFDSISADVKKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYID 183
Query: 420 IQSR 423
I +
Sbjct: 184 IHHQ 187
>gi|255557625|ref|XP_002519842.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540888|gb|EEF42446.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 246/424 (58%), Gaps = 47/424 (11%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W+ DP FS L K++G AG++DG V +EMK++ V+PN++ YN LL+ MG+A +P +
Sbjct: 298 WKPDPITFSVLAKMFGEAGDYDGIRYVLQEMKSLAVQPNVVVYNTLLEAMGKAGKPGLAR 357
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ EM ++GL+PN T +L + YG+AR+ +D + ++ M+ + LYNTLL+MC
Sbjct: 358 SLFDEMVESGLTPNEKTLTALAKIYGKARWAKDAMELWERMRSNDWPMDFILYNTLLSMC 417
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
AD+G EA +FEDMK SE+C IC
Sbjct: 418 ADLGMEKEAETLFEDMKRSEHCS----------QIC------------------------ 443
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
GKA R DD+VR N E G+ PDDR CGCLL+V++ + E++ K++
Sbjct: 444 ----------LGKANRVDDLVRVFNFSMERGVNPDDRLCGCLLSVVSLCEESEDVDKVLA 493
Query: 343 CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLE 402
C++ +N KL +VKL+ EE+ K+E + + + + ++ +CNCLID+C N NL
Sbjct: 494 CLQVANPKLVALVKLIAEEESSFETVKEEFKAIVSDTAVEARRPFCNCLIDVCRNRNLHG 553
Query: 403 NACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFP 462
A +LL LG +Y D+ +++ +WSL ++SLS+GAA TAL W+ L K ++ E P
Sbjct: 554 RAHELLYLGSLYGLYPDLHNKTEDEWSLDVRSLSVGAAHTALEEWMGTLVKFVQRNEALP 613
Query: 463 PLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRS- 521
+ +TG G HK+S +GLA+ F SH+++L APF S +K G F+ T +W +SRS
Sbjct: 614 EIFSAHTGTGTHKFS-QGLANAFASHVEKLAAPFRQSEEKAGCFVATREDLVTWAQSRSP 672
Query: 522 SLVS 525
SL++
Sbjct: 673 SLIT 676
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 149/354 (42%), Gaps = 36/354 (10%)
Query: 72 SSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC---- 127
S P S WVNP P+ S L + R + + ++P ++L+ A + C
Sbjct: 98 SKPNS-TWVNPTKPKRSVLSLQ----RQKRSPYSLNPKVKE--LRLF--AQKLNDCDSTE 148
Query: 128 ---LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE--MTDNGLSPNWNTYA 182
L++ E++ P +T N L + + RPWQ ++ T N Y
Sbjct: 149 SSFLSLLEQI------PYPLTRENALLILN-SLRPWQKAHLFFNWIKTQNSFPVETIFYN 201
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+++ R E + EM ++L Y+T++ D A E FE M +
Sbjct: 202 VTMKSLRFGRQFELIDKLANEMVSNEIELDNITYSTIITCAKRCNRFDMALEWFERMYKT 261
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
PD T+S+++ + + G+V E +++ + +G++P+ + L + +G+A D
Sbjct: 262 -GLMPDEVTYSAILDVYAKLGRVEEVLSLYERGVASGWKPDPITFSVLAKMFGEAGDYDG 320
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV--ECVEKSNSKLGYVVKLLLE 360
+ L + L + P+ LL M + K L + + E VE S L K L
Sbjct: 321 IRYVLQEMKSLAVQPNVVVYNTLLEAMGKAGKPGLARSLFDEMVE---SGLTPNEKTLTA 377
Query: 361 EQDIEGDFK--KEATELFNSI-SKDVKKAYC--NCLIDLCVNLNLLENACKLLE 409
I G + K+A EL+ + S D + N L+ +C +L + + A L E
Sbjct: 378 LAKIYGKARWAKDAMELWERMRSNDWPMDFILYNTLLSMCADLGMEKEAETLFE 431
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 236/426 (55%), Gaps = 4/426 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + W+ D + T+++L+G AG ++++EEMK GV+P+ I YN ++ +GRA
Sbjct: 138 RVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAG 197
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R +++EM G+ PN T ++++ Y R + L V++ +++ G+ V +YN
Sbjct: 198 RMGHALKVFEEMEREGVKPNAVTLSTVMETYSRCGNVMEGLEVFQRLRQ-GVACDVIVYN 256
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L MC + G EA + +M S + QP+ WT+ +MI++ + +G EA F++M+E
Sbjct: 257 AVLKMCREAGLASEAEQYLREMTESGH-QPNDWTYRNMISVYAKKGMAVEAHRTFSQMVE 315
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT-PKEE 336
AG++ ++ TSL+Q YG A+ + V L+ + + PD+R C +LN++ EE
Sbjct: 316 AGYQIDVMAYTSLLQAYGNAKEYNKVQEILDEMTSVNCAPDERLCCVILNLLDSCDTDEE 375
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCV 396
LG L C+ +S + +V + EE + + + E L + I+++ K CN L+ L
Sbjct: 376 LGILRSCLRMCSSTMDTIVGQIFEENLVLRELRGELQSLLSDITEEAHKPICNSLMQLSW 435
Query: 397 NLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALE 456
+ ++ +LL L L VYT +Q++SPT WSLHL+SLS GAA AL W++ + A++
Sbjct: 436 HKGDRNHSFQLLSLFRVLGVYTGLQTKSPTMWSLHLRSLSTGAAHCALLSWLSSVRYAIK 495
Query: 457 SGEEFPPLLGINTGHGKHKYSDK-GLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
G+E P + I TG G +D+ L V S LKE ++PF + D+ W +
Sbjct: 496 EGQELPGRIIIETGVGNQLNADEFRLIVVISSLLKECSSPFKECADRKDWLEASGVDVTQ 555
Query: 516 WLESRS 521
WLES S
Sbjct: 556 WLESTS 561
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ ++K+ ++ + E+M V+P+ ITY+ L+ R + M
Sbjct: 46 YNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAWFDRMH 105
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G P+ TY++++ YG+ ++ +++Y +K+ G + Y T++ + GY
Sbjct: 106 EAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIR 165
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A IFE+MK S QPD+ ++ MI G++ A +F EM G +PN L+++
Sbjct: 166 AAVSIFEEMKGS-GVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTV 224
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
++ Y + + + RL + G+ D
Sbjct: 225 METYSRCGNVMEGLEVFQRLRQ-GVACD 251
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
Query: 142 NMITYNNLLDTMGRAKRPWQV-KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
N+ TYN +L + R R W+ + I ++M + + P+ TY++L+ R Y + ++
Sbjct: 42 NIYTYNVMLKVLRRG-RQWEFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAW 100
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ M E G V Y+T++ + +G DEA ++E +K + +PD T+ +M+ +
Sbjct: 101 FDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQA-GWKPDKVTYGTMVRLFG 159
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + A ++F EM +G +P+ V +I C G+A R ++ + G+ P+
Sbjct: 160 RAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPN 217
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 18/192 (9%)
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
S N TY +L+ R R E + + +M ++ Y+TL++ Y D A
Sbjct: 40 SLNIYTYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMA 99
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
F+ M + C PD T+S+MI + GK EA A++ + +AG++P+ ++++ +
Sbjct: 100 WFDRMHEA-GCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLF 158
Query: 295 GKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
G+A V + G+ PD + N+M + C+ ++ ++G+
Sbjct: 159 GRAGYIRAAVSIFEEMKGSGVQPD----AIVYNIM-----------IACLGRAG-RMGHA 202
Query: 355 VKLLLEEQDIEG 366
+K + EE + EG
Sbjct: 203 LK-VFEEMEREG 213
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 197 TLSVYREMK-EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
L ++R ++ E L++ YN +L + + + +I EDM ++ + +PD+ T+S++
Sbjct: 26 ALLLFRWLRAEHSSSLNIYTYNVMLKVLRRGRQWEFSQQIAEDMANA-DVRPDNITYSTL 84
Query: 256 ITICSCRGKVSEAE-AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
I+ C+ R +A A F+ M EAG P++ +++I YGK + D+ + R+ + G
Sbjct: 85 IS-CANRCNYQDAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAG 143
Query: 315 ITPDDRFCGCLLNV 328
PD G ++ +
Sbjct: 144 WKPDKVTYGTMVRL 157
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 221/423 (52%), Gaps = 4/423 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
+ W+ D + T+++L+G AG +++++EMK G++P + YN ++ +GRA R
Sbjct: 139 VKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGR 198
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+++EM G+ PN T ++++ Y R+ + L ++ M++ + + +YN
Sbjct: 199 MGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMRQD-LACDIIVYNA 257
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ MC + G EA + +M + QP+ WT+ +MI++ + G EA+ MF++++EA
Sbjct: 258 VIKMCREAGLVPEAEQYLREMVEYGH-QPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEA 316
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE-EL 337
G++P++ TSL+Q YG A+ + V L+ + PD+R +LN++ + E
Sbjct: 317 GYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWCVILNLLDACDTDVEF 376
Query: 338 GKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
L C+ N + +V + EE + L + ++++ K CN L+ L +
Sbjct: 377 EILRSCLRMCNPTMDNIVGHIFEENLVLKKLGDGLQSLLSDMAEEAHKPICNSLLQLIWH 436
Query: 398 LNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALES 457
A KLL L + VYT +Q++S WSLHLKSLS GAA AL W++ + A++
Sbjct: 437 KGDRNYAFKLLSLFCSSGVYTGLQTKSSIMWSLHLKSLSTGAAHCALLSWLSSVRYAIQE 496
Query: 458 GEEFPPLLGINTGHGKHKYSDK-GLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
G+E P I TG G +D+ L V S LKE +PF + D+ W + + W
Sbjct: 497 GQELPSRFMIETGVGNQLNADELRLVVVISSLLKEFTSPFIECVDRKDWLEASGVDVRQW 556
Query: 517 LES 519
LE+
Sbjct: 557 LET 559
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE-AEAMFNEMLEAGFEPNLFVLTSL 290
A +F+ +++ +N + +T++ M+ + RG+ E ++ + +M+ AG P+ ++L
Sbjct: 26 ALSLFKWLQAEQNFNLNIYTYNVMLKVLR-RGQQWELSQQIAEDMINAGIRPDNITYSTL 84
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNS 349
I C + D + +R+ + PD +++V + K +E L E V+KS
Sbjct: 85 ISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGW 144
Query: 350 K 350
K
Sbjct: 145 K 145
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 230/425 (54%), Gaps = 7/425 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W++D + + +Y AG++ + + +EM+ G PN + N L+ T+ +A + Q K
Sbjct: 244 WKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAK 303
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM +G+SP T + L+ Y R + VY +K +G + V +YN+L+ C
Sbjct: 304 KVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKAC 363
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G ++A +I ++MK + C PD T+ + + + +G V A MF++++ +P+
Sbjct: 364 VEGGRVEQAEDILKEMKRA-GCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPD 422
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELG-ITPDDRFCGCLLNVMTQTPK-EELGKLV 341
+ T +I+ A + + + + E G +PD+R G LL+ M +E ++
Sbjct: 423 TPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAMAKNDDERLAIL 482
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEG-DFKKEATELFNS--ISKDVKKAYCNCLIDLCVNL 398
+C++K N+ L ++ ++ +++ D E E F S D +K CNCLID+C ++
Sbjct: 483 DCLDKFNAPLHELMSAIVRKEEPRSRDEVAEMVEKFISDYPETDSRKPLCNCLIDICSSV 542
Query: 399 NLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESG 458
+ A K+ +G+ + Y +Q+ P+ W L+L++LS+ AA A+ W++ L A+ G
Sbjct: 543 GMKHAAHKIFAMGVAVGAYDGLQTNLPSLWRLNLRTLSMPAAECAIEAWVSSLKAAVREG 602
Query: 459 EEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
+E P L I TG G+ + S + L + + LK+L APF ++ + G++ +T AA ++W++
Sbjct: 603 DELPEDLIIETGVGRVR-SGQRLNPIVGTLLKKLGAPFTENTEPAGYYCSTGAAVEAWIK 661
Query: 519 SRSSL 523
+R +L
Sbjct: 662 ARIAL 666
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+AR E + I+ ++ ++K+ + + EEM G++P+ T++ L++ R +
Sbjct: 133 KARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCR 192
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + ++ M G+ P+ TY S++ YGR + + +Y ++K +L Y
Sbjct: 193 QPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYG 252
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+ + A G ++ ++M+ S P++ ++++ S GKV++A+ +FNEM
Sbjct: 253 AIANVYARAGDYQSIIQLVQEMRDS-GSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRT 311
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTD 301
+G P L+ L++ Y + D
Sbjct: 312 SGVSPTPVTLSILVEMYTRVGAYD 335
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRGKVSEAEAMFNE 274
YN +L + + + + ++ E+M + QPD++TFS++I CR + EA F
Sbjct: 146 YNVMLKILRNGRQLELSEKLVEEM-TGRGIQPDNYTFSTLINCAKRCR-QPEEALKWFER 203
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M G P+ S+I YG+ R ++ V +L + D G + NV +
Sbjct: 204 MKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGD 263
Query: 335 -EELGKLVECVEKSNSKLGYVV 355
+ + +LV+ + S S V+
Sbjct: 264 YQSIIQLVQEMRDSGSSPNAVI 285
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 219 LLAMCADVGYTDEAFEIFEDMKSS-ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
++ + ++ ++A FE +K+ E + + +T++ M+ I ++ +E + EM
Sbjct: 112 IVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTG 171
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
G +P+ + ++LI C + ++ ++ ++ R+ GI PD+ ++++ + +
Sbjct: 172 RGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGR-----V 226
Query: 338 GKLVECVE 345
G++ E VE
Sbjct: 227 GRVNEAVE 234
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 230/425 (54%), Gaps = 7/425 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W++D + + +Y AG++ + + +EM+ G PN + N L+ T+ +A + Q K
Sbjct: 244 WKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAK 303
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM +G+SP T + L+ Y R + VY +K +G + V +YN+L+ C
Sbjct: 304 KVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKAC 363
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G ++A +I ++MK + C PD T+ + + + +G V A MF++++ +P+
Sbjct: 364 VEGGRVEQAEDILKEMKRA-GCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPD 422
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELG-ITPDDRFCGCLLNVMTQTPK-EELGKLV 341
+ T +I+ A + + + + E G +PD+R G LL+ M +E ++
Sbjct: 423 TPLFTVMIRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLLSCMAMAKSDDERLAIL 482
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEG-DFKKEATELFNS--ISKDVKKAYCNCLIDLCVNL 398
+C++K N+ L ++ ++ +++ D E E F S D +K CNCLID+C ++
Sbjct: 483 DCLDKFNAPLHELMSAIVRKEEPRSRDEVAEMVEKFISDYPETDSRKPLCNCLIDICSSV 542
Query: 399 NLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESG 458
+ A K+ +G+ + Y +Q+ P+ W L+L++LS+ AA A+ W++ L A+ G
Sbjct: 543 GMKHAAHKIFAMGVAVGAYDGLQTNLPSLWRLNLRTLSMPAAECAIEAWVSSLKAAVREG 602
Query: 459 EEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
+E P L I TG G+ + S + L + + LK+L APF ++ + G++ +T AA ++W++
Sbjct: 603 DELPEDLIIETGVGRVR-SGQRLNPIVGTLLKKLGAPFTENTEPAGYYCSTGAAVEAWIK 661
Query: 519 SRSSL 523
+R +L
Sbjct: 662 ARIAL 666
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+AR E + I+ ++ ++K+ + + EEM G++P+ T++ L++ R +
Sbjct: 133 KARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCR 192
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+P + ++ M G+ P+ TY S++ YGR + + +Y ++K +L Y
Sbjct: 193 QPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYG 252
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+ + A G ++ ++M+ S P++ ++++ S GKV++A+ +FNEM
Sbjct: 253 AIANVYARAGDYQSIMQLVQEMRDS-GSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRT 311
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTD 301
+G P L+ L++ Y + D
Sbjct: 312 SGVSPTPVTLSILVEMYTRVGAYD 335
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRGKVSEAEAMFNE 274
YN +L + + + + ++ E+M + QPD++TFS++I CR + EA F
Sbjct: 146 YNVMLKILRNGRQLELSEKLVEEM-TGRGIQPDNYTFSTLINCAKRCR-QPEEALKWFER 203
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M G P+ S+I YG+ R ++ V +L + D G + NV +
Sbjct: 204 MKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGD 263
Query: 335 -EELGKLVECVEKSNSKLGYVV 355
+ + +LV+ + S S V+
Sbjct: 264 YQSIMQLVQEMRDSGSSPNAVI 285
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 219 LLAMCADVGYTDEAFEIFEDMKSS-ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
++ + ++ ++A FE +K+ E + + +T++ M+ I ++ +E + EM
Sbjct: 112 IVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTG 171
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
G +P+ + ++LI C + ++ ++ ++ R+ GI PD+ ++++ + +
Sbjct: 172 RGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGR-----V 226
Query: 338 GKLVECVE 345
G++ E VE
Sbjct: 227 GRVNEAVE 234
>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
Length = 555
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 218/429 (50%), Gaps = 9/429 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R W+ D +F + +Y G++ L ++ +M+ +KPN++ +N L+ T+GRA +
Sbjct: 126 RKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDMEQAEIKPNVVLFNTLIGTLGRAGKV 185
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ EM GL P+ T + L+ Y + + L VY +K+K +L V +YNTL
Sbjct: 186 TLAKGMFDEMASYGLEPSEITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTL 245
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L C + G A + +M+ E PD T+ ++ + + +G V+E AMF+++
Sbjct: 246 LKSCVESGNIQRAESLIAEME-REKQWPDHMTYGILMNVYATKGMVAEVRAMFDKLKNLA 304
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM--TQTPKEEL 337
P T LI+ +A D + + + G + ++R G L++ +Q E
Sbjct: 305 VFPKAAFYTMLIKASKQAGDFDRIPGIFDEMIANGCSVNERMSGMLVSCASSSQISDETR 364
Query: 338 GKLVECVEKSNSKLGYVVKLLL---EEQDIEGDFKKEATE-LFNSISKDVKKAYCNCLID 393
++ECV+K +L ++ LL +E D D E TE L I+ ++ CN +ID
Sbjct: 365 LGVLECVKKIKPRLHELLSRLLVLAKEDDDFDDIASETTEFLLREITAPSRRPMCNAVID 424
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
C L A +L G++ +Y + + P+ W L+L++LS AA AL WI L+
Sbjct: 425 FCCVLGSRNAARAILSSGVSAGLYHGLHTTLPSLWQLNLRTLSFAAAECALEAWIESLAT 484
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDK--GLASVFESHLKELNAPFHDSPDKVGWFLTTEA 511
A E+G+EFP L + TG G+ K + L+ LK +++PF ++ G+F+ +
Sbjct: 485 AAENGDEFPEDLMVETGTGRAKEATNSVSLSEFVGGVLKGMDSPFEENRRPGGYFIASGE 544
Query: 512 AAKSWLESR 520
AAK+WL+SR
Sbjct: 545 AAKAWLQSR 553
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
R+R + I A++ ++KL + + +EM + P+ T++ + R
Sbjct: 18 ARSRRDVCEITVFAYNMMLKLLRDGEQWSLSEELLKEMLEERIMPDNYTFSIFVSCSKRC 77
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + + + G+S + TY++++ YG+A + + +Y+ M++ + + +
Sbjct: 78 DQAEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSF 137
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+ + + VG +F DM+ +E +P+ F+++I GKV+ A+ MF+EM
Sbjct: 138 GVIANVYSRVGDYQAILRLFRDMEQAE-IKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMA 196
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTD 301
G EP+ L+ LI Y K D
Sbjct: 197 SYGLEPSEITLSILIDMYTKVGALD 221
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEA 268
+++V YN +L + D G E E PD++TFS ++ CS R + +A
Sbjct: 26 EITVFAYNMMLKLLRD-GEQWSLSEELLKEMLEERIMPDNYTFSIFVS-CSKRCDQAEDA 83
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
A F+ + E G + +++I YGKA RT + + + + PD G + NV
Sbjct: 84 IAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANV 143
Query: 329 MTQT 332
++
Sbjct: 144 YSRV 147
>gi|302791627|ref|XP_002977580.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
gi|300154950|gb|EFJ21584.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
Length = 555
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 217/429 (50%), Gaps = 9/429 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R W+ D +F + +Y G++ L ++ +M+ +KPN++ +N L+ T+GRA +
Sbjct: 122 RKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDMEQAEIKPNVVLFNTLIGTLGRAGKV 181
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ EM GL P+ T + L+ Y + + L VY +K+K +L V +YNTL
Sbjct: 182 TLAKGMFDEMATYGLEPSEITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTL 241
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L C + G A + +M+ E PD T+ ++ + + +G V+E AMF+++
Sbjct: 242 LKSCVESGNIQRAESLIAEME-MEKQWPDHMTYGILMNVYATKGMVAEVRAMFDKLKNLA 300
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM--TQTPKEEL 337
P T LI+ +A D + + + G + ++R G L++ +Q E
Sbjct: 301 VFPKAAFYTMLIKASKQAGDFDRIPGIFDEMVANGCSVNERMSGMLVSCASSSQISDETR 360
Query: 338 GKLVECVEKSNSKLGYVVKLLL---EEQDIEGDFKKEATE-LFNSISKDVKKAYCNCLID 393
++ECV+K +L ++ LL +E D D E TE L I+ ++ CN +ID
Sbjct: 361 LGVLECVKKIKPRLHELLSRLLVLAKEDDDFDDIASETTEFLLREITAPSRRPMCNAVID 420
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
C L A +L G++ +Y + + P+ W L+L++LS A AL WI L+
Sbjct: 421 FCCVLGSRNAARAILSSGVSAGLYHGLHTTLPSLWQLNLRTLSFAGAECALEAWIESLAT 480
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDK--GLASVFESHLKELNAPFHDSPDKVGWFLTTEA 511
A E+G+EFP + + TG G+ K + L+ LK +++PF ++ G+F+ +
Sbjct: 481 AAENGDEFPEDVMVETGTGRAKEATNSVSLSEFVGGVLKGMDSPFEENRRPGGYFIASGE 540
Query: 512 AAKSWLESR 520
AAK+WL+SR
Sbjct: 541 AAKAWLQSR 549
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
R+R + I A++ ++KL + + +EM + P+ T++ + R
Sbjct: 14 ARSRRDVCEITVFAYNMMLKLLRDGEQWSLSEVLLKEMLEERIMPDNYTFSIFVSCSKRC 73
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + + + G+S + TY++++ YG+A + + +Y+ M++ + + +
Sbjct: 74 DRAEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSF 133
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+ + + VG +F DM+ +E +P+ F+++I GKV+ A+ MF+EM
Sbjct: 134 GVIANVYSRVGDYQAILRLFRDMEQAE-IKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMA 192
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTD 301
G EP+ L+ LI Y K D
Sbjct: 193 TYGLEPSEITLSILIDMYTKVGALD 217
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 89/191 (46%), Gaps = 3/191 (1%)
Query: 143 MITYNNLLDTMGRAKRPWQV-KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+ YN +L + R W + + + KEM + + P+ T++ + R ED ++ +
Sbjct: 25 VFAYNMMLKLL-RDGEQWSLSEVLLKEMLEERIMPDNYTFSIFVSCSKRCDRAEDAIAWF 83
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
++E G+ Y+ ++ + G T EA ++++ M+ + N +PD +F + + S
Sbjct: 84 HRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKN-NWKPDLVSFGVIANVYSR 142
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G +F +M +A +PN+ + +LI G+A + + + G+ P +
Sbjct: 143 VGDYQAILRLFRDMEQAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMATYGLEPSEIT 202
Query: 322 CGCLLNVMTQT 332
L+++ T+
Sbjct: 203 LSILIDMYTKV 213
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 231 EAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA + F +S + C+ + ++ M+ + + S +E + EMLE P+ + +
Sbjct: 6 EALDFFRWARSRRDVCEITVFAYNMMLKLLRDGEQWSLSEVLLKEMLEERIMPDNYTFSI 65
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
+ C + R +D + +RL E G++ D ++++ + + E L + + K+N
Sbjct: 66 FVSCSKRCDRAEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNN 125
Query: 349 SK 350
K
Sbjct: 126 WK 127
>gi|224089797|ref|XP_002308815.1| predicted protein [Populus trichocarpa]
gi|222854791|gb|EEE92338.1| predicted protein [Populus trichocarpa]
Length = 129
Score = 172 bits (435), Expect = 5e-40, Method: Composition-based stats.
Identities = 74/110 (67%), Positives = 91/110 (82%), Gaps = 1/110 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD RAR +WR+D FSTLI++Y AGNFDGCLNVYEEMKA+GVKPN++ YN LLD MG
Sbjct: 18 YD-RARTGEWRLDATTFSTLIRIYKVAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMG 76
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
RAKRPWQVK Y+++ D+GLSP++ TYA+LL AYGRARYG+D +YR+M
Sbjct: 77 RAKRPWQVKKFYQDIIDSGLSPSFVTYAALLHAYGRARYGDDAFKIYRKM 126
Score = 52.0 bits (123), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
++ +YGRA E LS+Y + +L T ++TL+ + G D ++E+MK+
Sbjct: 1 MIDSYGRAGNVEKALSLYDRARTGEWRLDATTFSTLIRIYKVAGNFDGCLNVYEEMKAL- 59
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+P+ ++ ++ + + + + +++++G P+ +L+ YG+A+ DD
Sbjct: 60 GVKPNLVIYNILLDAMGRAKRPWQVKKFYQDIIDSGLSPSFVTYAALLHAYGRARYGDDA 119
Query: 304 VRALNRL 310
+ ++
Sbjct: 120 FKIYRKM 126
Score = 40.8 bits (94), Expect = 1.7, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +++ ++ E + D+ TFS++I I G ++ EM G +PNL +
Sbjct: 9 GNVEKALSLYDRARTGE-WRLDATTFSTLIRIYKVAGNFDGCLNVYEEMKALGVKPNLVI 67
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ G+A+R V + + + G++P
Sbjct: 68 YNILLDAMGRAKRPWQVKKFYQDIIDSGLSP 98
>gi|413918172|gb|AFW58104.1| hypothetical protein ZEAMMB73_609509 [Zea mays]
Length = 561
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 118/182 (64%), Gaps = 4/182 (2%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR EKW++DP T+ +++ T+GNF+ LN+++EMKA GV PN++ N L MG A
Sbjct: 283 RARAEKWQLDPVLCCTVNEVHSTSGNFNRALNLFKEMKATGVNPNLVMCNTRLYVMGHAL 342
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+PW VK+I++EM D + N TY LL AY RA Y ED ++VYR MK++ M V LYN
Sbjct: 343 QPWVVKSIHREMIDKQVQHNKVTYCCLLHAYTRAHYDEDAMAVYRLMKDEAM--DVMLYN 400
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSS--ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
LL+ D+GY DEA EIF DMK+S + +PD W++SSM+ S V E + NEM
Sbjct: 401 MLLSRYVDIGYVDEAEEIFRDMKASMDDRSKPDKWSYSSMLRQYSSTANVLGVEGILNEM 460
Query: 276 LE 277
+E
Sbjct: 461 VE 462
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 206/463 (44%), Gaps = 55/463 (11%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN +ST+I YG G F+ + +Y +MK GV+P+ ++YN L+D + R
Sbjct: 371 ISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 430
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T K+M GL + TY +L+ AYG+ +D ++ +MK +G+ +V Y+ L+
Sbjct: 431 TACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAY 490
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +A IF + K + +PD +SS+I C G V +A + EM +AG +PN
Sbjct: 491 SKAGMHQDATSIFVEFKRA-GLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPN 549
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLP-------------------------------- 311
+ SLI YG+ + D+V A +P
Sbjct: 550 IVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVL 609
Query: 312 ----------ELGITPDDRFCGCLLNVMTQ-TPKEELGKLVECVEKSNSKLGYVVKLLLE 360
+ G+ P+ +LN ++ + +E L+E + +S + + LL
Sbjct: 610 AAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFFDSWVYGIAHGLL- 668
Query: 361 EQDIEGDFKKEATELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVY 417
+ EA LF+ I++ A+ N L D+ + + A +++ +V+
Sbjct: 669 -MGLREHVWVEAQRLFDEIARMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVW 727
Query: 418 TDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS 477
+ RS Q+ L L +S+GAA LH+W+ DL + G P +L I TG GKH
Sbjct: 728 ENAWWRSEQQFCLDLHLMSVGAAQAMLHVWLLDLRALVWDGHALPRVLSILTGWGKHS-K 786
Query: 478 DKGLASV---FESHLKELNAPFHDSPDKVGWFLTTEAAAKSWL 517
G ++V ES L E+ APF G + ++WL
Sbjct: 787 VAGFSTVKRAVESRLLEIKAPFQVGRYNEGRLVCAGHIVRAWL 829
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 6/317 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA+ + + A+S ++ YG +G L V++ MK G KPN+ITYN ++D G+
Sbjct: 224 RAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGG 283
Query: 158 RPW-QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ I++EM G+ P+ T+ SL+ R ED+ V+ EM+ +G++ + Y
Sbjct: 284 VDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTY 343
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NTL+ G + A I M+ +N P+ T+S+MI G EA ++++M
Sbjct: 344 NTLIDAVCKGGQMELAASIMSSMR-LKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMK 402
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-E 335
E+G P+ +LI Y K R DD + A + +G+ D L++ + K +
Sbjct: 403 ESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYK 462
Query: 336 ELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKK---AYCNCLI 392
+ L + ++ + L + + ++AT +F + K + LI
Sbjct: 463 DAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLI 522
Query: 393 DLCVNLNLLENACKLLE 409
D C L+E+A LL+
Sbjct: 523 DSCCKCGLVEDAVVLLQ 539
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+ D +K ++P+ F++LI + ++ V+ EM+ G++ ++ TYN L
Sbjct: 287 KKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTL 346
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D + + + +I M +SPN TY++++ YG+ E+ + +Y +MKE G+
Sbjct: 347 IDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGV 406
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ YNTL+ + A +G D+A +DM+ + D T++++I +GK +A
Sbjct: 407 RPDRVSYNTLIDIYAKLGRFDDALTACKDMERV-GLKADVVTYNALIDAYGKQGKYKDAA 465
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRF 321
+F++M G PN+ ++LI Y KA D G+ PD D
Sbjct: 466 GLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSC 525
Query: 322 CGC--------LLNVMTQT 332
C C LL MTQ
Sbjct: 526 CKCGLVEDAVVLLQEMTQA 544
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 102 EKWR---IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT--YNNLLDTMGRA 156
EKW + F L++ G G ++ L YE M G + + + ++ T+GR
Sbjct: 153 EKWSHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRL 212
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ ++ G N Y++++ AYGR+ + L V++ MK+ G + ++ Y
Sbjct: 213 GKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITY 272
Query: 217 NTLLAMCADVGYT-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE-AEAMFNE 274
NT++ C G +A +IFE+M+ E +PD TF+S+I +CS RG + E ++ +F E
Sbjct: 273 NTIIDACGKGGVDLKKALDIFEEMQ-KEGVEPDRITFNSLIAVCS-RGSLWEDSQRVFAE 330
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M G E ++F +LI K + + ++ + I+P+
Sbjct: 331 MQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPN 374
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 214/511 (41%), Gaps = 77/511 (15%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN 142
K + S L K +D E ++ D ++T+I + G A NF+ C + +EM+ G +P
Sbjct: 42 KHQKESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPC 101
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
++TYN L+ GRA + I+ +M + G SP+ TY +L+ + +A + ++ + +Y+
Sbjct: 102 VVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQ 161
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM----------------------- 239
+M++ G Q Y+ ++ G EA ++FE+M
Sbjct: 162 KMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSG 221
Query: 240 -----------KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM------------- 275
PD T+S M+ + G + EAE MFNEM
Sbjct: 222 NYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYG 281
Query: 276 ----------------------LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
L++G PN+ + SL+ Y + Q+ D + +
Sbjct: 282 VMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAW 341
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT 373
G+ P + LL+ T + + ++V + +S+ + V LL Q + K
Sbjct: 342 GLVPTLQTHTILLSSCTASAQHH--QVVNLMHRSSETVYSFVCTLLLRQLPPQELKHIVQ 399
Query: 374 ELFNSIS---KDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD-IQSRSPTQWS 429
F S+ D K+ + + LI+ NL A + E+G +Y ++ ++ Q+S
Sbjct: 400 HFFESLHGEEHDCKRGFTDSLIEFLHNLERRPEAGLVWEVGREHNLYPQAVRMKANNQYS 459
Query: 430 LHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYSDKG--LASVFES 487
++L +S+G AL AL +++ + + P + I TG GKH + ++
Sbjct: 460 INLHVMSMGTALVALSRTLSEFREKMLYTGVAPERIEIITGWGKHSRVPGASLVRQAVQN 519
Query: 488 HLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
L L +PF+ VG F++ ++WL
Sbjct: 520 LLTALGSPFYVESSNVGCFVSHGKPLQNWLH 550
>gi|293333330|ref|NP_001168430.1| uncharacterized protein LOC100382200 [Zea mays]
gi|223948245|gb|ACN28206.1| unknown [Zea mays]
Length = 830
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
NF+ LN+++EMKA GVKPN++ N +L MG A +PW VK+I++EM D + + TY
Sbjct: 619 NFNRALNLFKEMKATGVKPNLVMCNTMLYVMGHALQPWVVKSIHREMIDKQVQHSKVTYC 678
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
LL AY RA Y ED ++VYR MK++ M V LYN LL+ D+ Y DEA EIF DMK+S
Sbjct: 679 CLLHAYTRAHYDEDAMAVYRLMKDEAMD--VMLYNMLLSRYVDIDYVDEAEEIFGDMKAS 736
Query: 243 --ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+ +PD W++SSM+ S + E + NEM+E
Sbjct: 737 MDDRSKPDKWSYSSMLRQYSSTANILGVEGILNEMVE 773
>gi|224029839|gb|ACN33995.1| unknown [Zea mays]
Length = 411
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
NF+ LN+++EMKA GVKPN++ N +L MG A +PW VK+I++EM D + + TY
Sbjct: 200 NFNRALNLFKEMKATGVKPNLVMCNTMLYVMGHALQPWVVKSIHREMIDKQVQHSKVTYC 259
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
LL AY RA Y ED ++VYR MK++ M V LYN LL+ D+ Y DEA EIF DMK+S
Sbjct: 260 CLLHAYTRAHYDEDAMAVYRLMKDEAMD--VMLYNMLLSRYVDIDYVDEAEEIFGDMKAS 317
Query: 243 --ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+ +PD W++SSM+ S + E + NEM+E
Sbjct: 318 MDDRSKPDKWSYSSMLRQYSSTANILGVEGILNEMVE 354
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 204/427 (47%), Gaps = 19/427 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +++TLI +Y G FD L ++M+ +G+K +++TYN L+D G+ +
Sbjct: 408 RPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAC 467
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M GL PN TY++L+ +Y +A +D +V+ E K G++ V LY++L+ C
Sbjct: 468 LFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCC 527
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA----MFNEMLEAGF 280
G ++A + ++M + QP+ T++S+I G+ + EA M N + + G
Sbjct: 528 KCGLVEDAVVLLQEM-TQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIG- 585
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRAL---NRLPELGITPDDRFCGCLLNVMTQTPK-EE 336
E ++ V+ A V+ A+ + + + G+ P+ +LN ++ +E
Sbjct: 586 ERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQE 645
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK---DVKKAYCNCLID 393
L+E + + + + LL + EA LF+ IS+ A+ N L D
Sbjct: 646 ASVLLEQMRFFDGWVYGIAHGLL--MGLREQVWVEAQRLFDEISRMDYATGAAFYNALTD 703
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
+ + + A +++ +V+ + RS Q+ L L +S+GAA LH+W+ DL
Sbjct: 704 VLWHFGQRQGAQEVVVAAKRRQVWENAWWRSEQQFCLDLHLMSVGAAQAMLHVWLLDLRA 763
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASV---FESHLKELNAPFHDSPDKVGWFLTTE 510
+ G P +L I TG GKH G+++V E L+E+ APF G +
Sbjct: 764 LVWDGHALPRVLSILTGWGKHS-KVAGVSTVKRAVELRLQEIKAPFQVGRYNEGRLVCAG 822
Query: 511 AAAKSWL 517
+ WL
Sbjct: 823 HIVREWL 829
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 12/320 (3%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA+ + + A+S ++ YG +G L V++ MK G KPN+ITYN ++D G+
Sbjct: 225 RAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGG 284
Query: 158 RPW-QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
Q I+ EM G+ P+ T+ SL+ R ED+ V+ EM+ +G++ + +
Sbjct: 285 VDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTF 344
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NTL+ G + A I M+ +N P+ T+S+MI G EA +++++M
Sbjct: 345 NTLIDAVCKGGQMELAASIMTTMR-GKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMK 403
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
E+G P+ +LI Y K R DD + A + +G+ D L++ + K
Sbjct: 404 ESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKY- 462
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA-------YCN 389
K C+ G V +L I+ K + +++ + K+A +
Sbjct: 463 --KDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYS 520
Query: 390 CLIDLCVNLNLLENACKLLE 409
LID C L+E+A LL+
Sbjct: 521 SLIDSCCKCGLVEDAVVLLQ 540
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 19/259 (7%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+++ D +K ++P+ F++LI + G ++ V+ EM+ G++ ++ T+N L
Sbjct: 288 KQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTL 347
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D + + + +I M +SPN TY++++ YG+ E+ +S+Y +MKE G+
Sbjct: 348 IDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGV 407
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ YNTL+ + A +G D+A +DM+ + D T++++I +GK +A
Sbjct: 408 RPDRVSYNTLIDIYAKLGRFDDALIACKDMERV-GLKADVVTYNALIDAYGKQGKYKDAA 466
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRF 321
+F++M G PN+ ++LI Y KA DV G+ PD D
Sbjct: 467 CLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSC 526
Query: 322 CGC--------LLNVMTQT 332
C C LL MTQ
Sbjct: 527 CKCGLVEDAVVLLQEMTQA 545
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 7/223 (3%)
Query: 102 EKWR---IDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLL-DTMGRA 156
EKW + F L++ G G ++ L YE M + + ++ +++ T+GR
Sbjct: 154 EKWSHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRL 213
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ ++ G N Y++++ AYGR+ + L V++ MK+ G + ++ Y
Sbjct: 214 GKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITY 273
Query: 217 NTLLAMCADVGYT-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
NT++ C G +A +IF++M+ E +PD TF+S+I +CS G +++ +F EM
Sbjct: 274 NTIIDACGKGGVDLKQALDIFDEMQ-KEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEM 332
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G E ++F +LI K + + + + I+P+
Sbjct: 333 QRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPN 375
>gi|414887493|tpg|DAA63507.1| TPA: hypothetical protein ZEAMMB73_333728 [Zea mays]
Length = 674
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 101/157 (64%), Gaps = 4/157 (2%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
NF+ LN+++EMKA GVKPN++ N +L MG A +PW VK+I++EM D + + TY
Sbjct: 463 NFNRALNLFKEMKATGVKPNLVMCNTMLYVMGHALQPWVVKSIHREMIDKQVQHSKVTYC 522
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
LL AY RA Y ED ++VYR MK++ M V LYN LL+ D+ Y DEA EIF DMK+S
Sbjct: 523 CLLHAYTRAHYDEDAMAVYRLMKDEAMD--VMLYNMLLSRYVDIDYVDEAEEIFGDMKAS 580
Query: 243 --ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+ +PD W++SSM+ S + E + NEM+E
Sbjct: 581 MDDRSKPDKWSYSSMLRQYSSTANILGVEGILNEMVE 617
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 212/481 (44%), Gaps = 66/481 (13%)
Query: 96 DTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
D A+N K PN +STLI Y +D L +YE+MK++G++ + + YN +L
Sbjct: 364 DMEAKNVK----PNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIY 419
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+A + ++ + EM D+G+ + TY SL+ YG+ + + ++M+ +G+ SV
Sbjct: 420 VKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSV 479
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
Y+TL+ + + G +AF ++ D K S +PD FSS I + G V A ++ N
Sbjct: 480 LTYSTLIDIYSKAGMHGDAFNVYLDFKES-GLKPDVVLFSSFIDTLAKNGLVEWALSLLN 538
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDD-----------------VVRALN-------- 308
+M E G +PN+ ++I +GK++ + ++RA N
Sbjct: 539 DMTEMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAGEMGIVGVYNGQIIRAANPVTRGRSA 598
Query: 309 -------------------RLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK-S 347
++ + G+ P+ +LN ++ E+ L+E +
Sbjct: 599 IDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQLRLFD 658
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK---DVKKAYCNCLIDLCVNLNLLENA 404
N G LL+ Q+I +A LFN + + A+ N L D+ + + A
Sbjct: 659 NFVYGVAYGLLMGYQEIW----SQAQSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRQGA 714
Query: 405 CKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPL 464
++ G+ V+ + S ++ L L +S GAA +H W+ ++ + G P
Sbjct: 715 QLVVLEGVNRRVWDNTWS----EFCLDLHLMSCGAAQAMVHAWLLNVRSIVFEGRAMPEF 770
Query: 465 LGINTGHGKHK--YSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSS 522
L I TG GKH L V E+ L + APF +G F++ A +WL +
Sbjct: 771 LSILTGWGKHSKIAGASTLRHVIEALLNSIGAPFQVERFNIGRFVSPSAVVAAWLRESGT 830
Query: 523 L 523
+
Sbjct: 831 M 831
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ AG+ + +++EM +G+ ++ TYN +D + + +
Sbjct: 303 DRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVL 362
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + PN TY++L+ Y + ++ L +Y +MK G+QL YNT+LA+
Sbjct: 363 LDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKA 422
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E + ++M+ S + D+ T++S+I +G++ + +M G P++
Sbjct: 423 GKYGEIAIVCDEMEDS-GIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLT 481
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++LI Y KA D E G+ PD
Sbjct: 482 YSTLIDIYSKAGMHGDAFNVYLDFKESGLKPD 513
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 37/244 (15%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY-KE 168
A S LI Y +G + + V E MK G++P +TYN ++D G+ + Y ++
Sbjct: 235 ANSALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQ 294
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL---AMCAD 225
M + L P+ T+ SLL A RA + ED +++ EM G+ + YNT + C +
Sbjct: 295 MLRDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGN 354
Query: 226 V---------------------------GYT-----DEAFEIFEDMKSSENCQPDSWTFS 253
+ GY+ DEA +++E MKS Q D ++
Sbjct: 355 IELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSL-GIQLDRVCYN 413
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+++ I GK E + +EM ++G E + SLI YGK R D V + +
Sbjct: 414 TVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRR 473
Query: 314 GITP 317
G+ P
Sbjct: 474 GVAP 477
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 108/213 (50%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T I GN + + V +M+A VKPN++TY+ L+D + ++ + +Y
Sbjct: 338 DIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLY 397
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRA-RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M G+ + Y ++L Y +A +YGE + V EM++ G++ YN+L+
Sbjct: 398 EKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAI-VCDEMEDSGIEKDTVTYNSLINGYGK 456
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D + +DM+ P T+S++I I S G +A ++ + E+G +P++
Sbjct: 457 QGRLDIVSFLVQDMRR-RGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVV 515
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +S I K + + LN + E+GI P+
Sbjct: 516 LFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPN 548
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 85/210 (40%), Gaps = 40/210 (19%)
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ +G+ RP + + G ++L+ AY R+ + + V MK G+
Sbjct: 205 IGALGKMSRPDLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGL 264
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEI--FEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
+ + YN ++ C G D F + F M C PD TF+S+++ CS G + +
Sbjct: 265 RPTTVTYNAVIDACGK-GGVDLRFTLGYFRQMLRDRLC-PDRKTFNSLLSACSRAGHLED 322
Query: 268 AEAMFNEMLEAGF-----------------------------------EPNLFVLTSLIQ 292
A A+F+EM+ G +PN+ ++LI
Sbjct: 323 ARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTLID 382
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFC 322
Y K ++ D+ ++ ++ LGI DR C
Sbjct: 383 GYSKLEKYDEALKLYEKMKSLGIQL-DRVC 411
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 205/432 (47%), Gaps = 23/432 (5%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++TL+ +Y G F+ LNV +EM++ G+K + +TYN LL G+ + +VK +
Sbjct: 280 LDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRV 339
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
++EM + PN TY++L+ Y + ++ + V+RE K+ G++ V LY+ L+ A+C
Sbjct: 340 FEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCK 399
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA-EAMFNEMLEAGFEPN 283
+ G + A ++M + E +P+ T++S+I G V +A E+ + +
Sbjct: 400 N-GLVESAVSFLDEM-TKEGIRPNVVTYNSIIDAFGRSGIVEDATESEVGDKEDNQIIKI 457
Query: 284 LFVLTSLIQCYGKAQRTDD-----VVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EEL 337
L + C+ K + ++ +++ EL I P+ +LN ++ E+
Sbjct: 458 FGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDA 517
Query: 338 GKLVECVEK-SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK---DVKKAYCNCLID 393
L+E + N G LL+ D + +A LF+ + + A+ N L D
Sbjct: 518 SMLLEELRLFDNQVYGVAHGLLMGYGD---NVWVQAQSLFDEVKQMDSSTASAFYNALTD 574
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
+ + A ++ G V+ ++ S S L L +S GAA +H W+ ++
Sbjct: 575 MLWHFGQRRGAQLVVLEGKRRHVWENMWSNS----CLDLHLMSSGAARAMVHAWLLNIRS 630
Query: 454 ALESGEEFPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEA 511
+ G E P LL I TG GKH D L E+ L + APF + +G F++T A
Sbjct: 631 IVFEGHELPQLLSILTGWGKHSKVVGDGALRRAIEALLTGMGAPFRVAKCNLGRFISTGA 690
Query: 512 AAKSWLESRSSL 523
+WL +L
Sbjct: 691 VVAAWLRESGTL 702
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 1/202 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+N++ EM G++ ++ TYN LLD + + + I EM + PN TY++++
Sbjct: 197 MNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDG 256
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y +A ++ L+++ EMK + L YNTLL++ A +G +EA + ++M+SS +
Sbjct: 257 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESS-GIKK 315
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D+ T+++++ +GK E + +F EM PNL ++LI Y K + +
Sbjct: 316 DAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVF 375
Query: 308 NRLPELGITPDDRFCGCLLNVM 329
+ G+ D L++ +
Sbjct: 376 REFKKAGLKADVVLYSALIDAL 397
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 8/201 (3%)
Query: 138 GVKPNMITYNNLLDTMG-------RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
G+KPN++TYN ++D G RA + ++ EM G+ + TY +LL A +
Sbjct: 165 GLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCK 224
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ + EM K + +V Y+T++ A G DEA +F +MK + + D
Sbjct: 225 GGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFA-SIGLDRV 283
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+++++++I + G+ EA + EM +G + + +L+ YGK + ++V R +
Sbjct: 284 SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEM 343
Query: 311 PELGITPDDRFCGCLLNVMTQ 331
I P+ L++V ++
Sbjct: 344 KAERIFPNLLTYSTLIDVYSK 364
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 14/251 (5%)
Query: 171 DNGLSPNWNTYASLLRAYGRA-----RYGE--DTLSVYREMKEKGMQLSVTLYNTLLAMC 223
D+GL PN TY +++ A G+ R E D ++++ EM +G++ + YNTLL
Sbjct: 163 DSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAV 222
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G D AF+I +M ++ P+ T+S++I + G++ EA +FNEM A +
Sbjct: 223 CKGGQMDLAFQIMSEM-PRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLD 281
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
+L+ Y K R ++ + + GI D LL + K EE+ ++ E
Sbjct: 282 RVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFE 341
Query: 343 CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYC---NCLID-LCVNL 398
++ + L + +G +EA E+F K KA + LID LC N
Sbjct: 342 EMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKN- 400
Query: 399 NLLENACKLLE 409
L+E+A L+
Sbjct: 401 GLVESAVSFLD 411
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+ D +S LI G + ++ +EM G++PN++TYN+++D GR+
Sbjct: 384 KADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG------- 436
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT----------------LSVYREMKEKG 208
I ++ T++ + + +++ +G+ E T L+V+ +M E
Sbjct: 437 IVEDATESEVGDKEDN--QIIKIFGQLA-AEKTCHAKKENRGRQEILCILAVFHKMHELD 493
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
++ +V ++ +L C+ ++A + E+++ +N
Sbjct: 494 IKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDN 529
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 117/215 (54%), Gaps = 1/215 (0%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
KW D ++S LI G AG ++ L V EM+A G KPN+ TYN L+D +G+A + +
Sbjct: 39 KWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEA 98
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM DNG P+ TY L+ G+A + +++ EM+E+G YN+L+
Sbjct: 99 LRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYG 158
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
VG + +A E+ E+M+ C PD T+SS+IT G+ +A +F EM G +P
Sbjct: 159 LGKVGRSQKAMELLEEME-RHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKP 217
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ T+L+ GKA R DD + L+ + E G+ P
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKP 252
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 111/212 (52%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI G G + + EEM+ G P+++TY++L+ +G+ + ++
Sbjct: 148 DTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLF 207
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G P+ T+ +L+ A G+A +D L + EMKE+G++ V YN L+A V
Sbjct: 208 QEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKV 267
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA+ + ++MK + C+PD T+S +IT ++ EA + +M + G P+
Sbjct: 268 GDLVEAYNLLDEMKRN-GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTIT 326
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI GKA +D R +R+ G PD
Sbjct: 327 YNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 18/252 (7%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI +G G+ N+ +EMK G KP+++TY+ L+ + +A + + + K+M
Sbjct: 257 YNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKME 316
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ TY +L+ G+A D ++ MK KG V Y+TL+ +
Sbjct: 317 KEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVE 376
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A +FE+M+S QPD +T+ S+IT+ G+V +A+ +F+EM G P++ +
Sbjct: 377 SACVLFEEMESV-GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAF 435
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD-----------------DRFCGCLLNVMTQTP 333
+ G+ R + + + E G+ PD D CG L ++ Q
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGC 495
Query: 334 KEELGKLVECVE 345
+ K EC+E
Sbjct: 496 AFDSLKFDECLE 507
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN++TYN+LL+ + +A + + + +++E+ +P+ +Y+ L+ + GRA E L V
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
EM+ KG + ++ YNTL+ G DEA + +M+ + C PD T++ +I+
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDN-GCVPDVRTYNCLISTLG 125
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G++SEA +F EM E G P+ F SLI GK R+ + L + G PD
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 2/255 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +++ D +STLI G A + ++EEM+++G++P++ TY +++ +G+A
Sbjct: 349 RMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAG 408
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ EM GLSP+ TY + L + GR ++ ++ +MKE G+ V Y+
Sbjct: 409 QVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYD 468
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
LL + D+A + +++ + C DS F + I + G V EA +
Sbjct: 469 ALLLGLSKTKEVDDACGLLKEL-IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANS 527
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
G P +LI KA R + L L E G PD L++ + QT + +
Sbjct: 528 KGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDT 587
Query: 338 G-KLVECVEKSNSKL 351
+L+E + K KL
Sbjct: 588 AFELLEEMSKRGLKL 602
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 39/270 (14%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RA K E + + A + PN ++TL+ G AG FD L + EM+ G P++
Sbjct: 56 RAGKW-EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDV 114
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
TYN L+ T+G+A R + T++ EM + G P+ TY SL+ G+ + + + E
Sbjct: 115 RTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEE 174
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M+ G V Y++L+ G T +AF++F++MK +PDS TF++++ G
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR-KPDSITFTALMDALGKAG 233
Query: 264 KVSEAEAMFNEMLEA-----------------------------------GFEPNLFVLT 288
+V +A + +EM E G +P++ +
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI KA + D+ + L ++ + G PD
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPPD 323
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI A D V ++M+ G P+ ITYN L++ +G+A ++
Sbjct: 288 DVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLF 347
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G +P+ TY++L+ A G+A E ++ EM+ G+Q + Y +++ +
Sbjct: 348 DRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKA 407
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A +F +M+ + PD T+++ + G+ EA +F +M E+G P++
Sbjct: 408 GQVDDADRLFSEMR-GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFCGCL 325
+L+ K + DD L L E G D +F CL
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECL 506
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 59/122 (48%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D F +++ + GN D + + + G+ P +YN L+D + +A R +
Sbjct: 497 FDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNT 556
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++ + G P+ +Y+SL+ A G+ + + EM ++G++LS Y+ L+ D
Sbjct: 557 LEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQD 616
Query: 226 VG 227
G
Sbjct: 617 WG 618
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 210/484 (43%), Gaps = 73/484 (15%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
RI PN ++ST+I + AG FD LN++ EM+ +G+ + ++YN LL + R +
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I +EM G+ + TY +LL YG+ ++ V+ EMK + + ++ Y+TL+
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ G EA EIF + KS+ + D +S++I G V A ++ +EM + G P
Sbjct: 524 YSKGGLYKEAMEIFREFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 283 NLFVLTSLIQCYGKAQRTDDVV------------------------RALNRLPELGITPD 318
N+ S+I +G++ D R + +L +
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 319 DRFC----------GCLLNVMTQTPK-----------------------EELGKLVECVE 345
+R C+L V + + E+ L+E +
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Query: 346 KSNSKL-GYVVKLLLEEQDIEGDFKKEATELF---NSISKDVKKAYCNCLIDLCVNLNLL 401
++K+ G V LL+ +++ + +A LF N + A+ N L D+ +
Sbjct: 703 LFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQK 759
Query: 402 ENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEF 461
A + G + +V+ ++ S S L L +S GAA +H W+ ++ + G E
Sbjct: 760 RGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHEL 815
Query: 462 PPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLES 519
P +L I TG GKH D L E L+ ++APFH S +G F ++ + +WL
Sbjct: 816 PKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRE 875
Query: 520 RSSL 523
++L
Sbjct: 876 SATL 879
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 146/306 (47%), Gaps = 8/306 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTIYKE 168
AFS LI YG +G + ++V+ MK G++PN++TYN ++D G+ + QV + E
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M NG+ P+ T+ SLL R E +++ EM + ++ V YNTLL G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D AFEI M + P+ ++S++I + G+ EA +F EM G +
Sbjct: 390 MDLAFEILAQMP-VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKS 347
+L+ Y K R+++ + L + +GI D LL + K +E+ K+ +++
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA---YCNCLID-LCVNLNLLEN 403
+ + L + +G KEA E+F +A + LID LC N L+ +
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN-GLVGS 567
Query: 404 ACKLLE 409
A L++
Sbjct: 568 AVSLID 573
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 116/237 (48%), Gaps = 2/237 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K +D RN + D F++L+ + G ++ N+++EM ++ ++ +YN LLD
Sbjct: 325 KFFDEMQRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ + + I +M + PN +Y++++ + +A ++ L+++ EM+ G+ L
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
YNTLL++ VG ++EA +I +M +S + D T+++++ +GK E + +F
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREM-ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
EM PNL ++LI Y K + + G+ D L++ +
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
++ T+GR + K I++ G +++L+ AYGR+ E+ +SV+ MKE G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ ++ YN ++ C G + F D QPD TF+S++ +CS G A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F+EM E ++F +L+ K + D L ++P I P+
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN 408
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 113/240 (47%), Gaps = 6/240 (2%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +NE+ ++ STL G G ++E A G + ++ L+ GR+
Sbjct: 227 RRKNEQGKLASAMISTL----GRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSG 282
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLY 216
+ +++ M + GL PN TY +++ A G+ + + EM+ G+Q +
Sbjct: 283 LHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITF 342
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N+LLA+C+ G + A +F++M ++ + D +++++++ G++ A + +M
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
PN+ +++I + KA R D+ + + LGI D LL++ T+ + E
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 200/434 (46%), Gaps = 42/434 (9%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R R D ++TLI N D + V+EEM A +P++ TYN ++ GR +
Sbjct: 58 RQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKA 117
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + ++KE+ + G P+ TY SLL A+ + E V E+ + G + YNT+
Sbjct: 118 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 177
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ M +G D A ++++M++ C PD+ T++ ++ ++SEA + EM +AG
Sbjct: 178 IHMYGKMGRLDLALGLYDEMRAI-GCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAG 236
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+P L ++LI Y K+ R DD R +R+ E G+ PD +L+V ++ +E K
Sbjct: 237 LKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS--DETRK 294
Query: 340 LVECVEKSNSKLGY-----VVKLLL-------EEQDIEGDFKK-EATELFNS--ISKDVK 384
L+ + ++ K GY + ++LL E +IEG + EA N IS +
Sbjct: 295 LM-VLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILI 353
Query: 385 KAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTAL 444
KA C + +LL+ AC +Q P + L+ +L +
Sbjct: 354 KAEC-----ISQGASLLKRAC--------------LQGYEPDDGP--DRQLASNMSLGVI 392
Query: 445 HIWINDLSKALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVG 504
+ + +L+ E P + + TG G +Y+ L ++L E+ +PF + G
Sbjct: 393 SKSQSAIDASLQGAPESPKSIVLVTGEG--EYNMVSLRKTIRAYLLEMGSPFLPCRSRSG 450
Query: 505 WFLTTEAAAKSWLE 518
F+ + K WL+
Sbjct: 451 RFVVKAYSLKMWLK 464
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 218/495 (44%), Gaps = 73/495 (14%)
Query: 94 SYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+++ A+ RI PN ++ST+I + AG FD LN++ EM+ + + + ++YN LL
Sbjct: 393 AFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLS 452
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R + I +EM G+ + TY +LL YG+ ++ V+ EMK + +
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLP 512
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ Y+TL+ + G EA E+F + KS+ + D +S++I G V A ++
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEVFREFKSA-GLRADVVLYSALIDALCKNGLVGSAVSL 571
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKA---QRTDD-------------------------- 302
+EM + G PN+ S+I +G++ +R+ D
Sbjct: 572 IDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSALSELTETEGNRVI 631
Query: 303 ---------------------------VVRALNRLPELGITPDDRFCGCLLNVMTQTPK- 334
++ ++ +L I P+ +LN ++
Sbjct: 632 QLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSF 691
Query: 335 EELGKLVECVEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELF---NSISKDVKKAYCNC 390
E+ L+E + ++K+ G V LL+ +++ + +A LF N + A+ N
Sbjct: 692 EDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGSTASAFYNA 748
Query: 391 LIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWIND 450
L D+ + A + G + +V+ ++ S S L L +S GAA +H W+ +
Sbjct: 749 LTDMLWHFGQKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGAARAMVHAWLLN 804
Query: 451 LSKALESGEEFPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHDSPDKVGWFLT 508
+ + G E P +L I TG GKH D L E L+ ++APFH S +G F +
Sbjct: 805 IRSIVYEGHELPKVLSILTGWGKHSKVVGDGALKRAVEVLLRGMDAPFHLSKCNMGRFTS 864
Query: 509 TEAAAKSWLESRSSL 523
+ + +WL ++L
Sbjct: 865 SGSVVATWLRESATL 879
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 8/306 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTIYKE 168
AFS LI YG +G + ++V+ MK G++PN++TYN ++D G+ + QV + E
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M N + P+ T+ SLL R E +++ EM + ++ V YNTLL G
Sbjct: 330 MQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D AFEI M ++ P+ ++S++I + G+ EA +F EM +
Sbjct: 390 MDLAFEILAQMP-AKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYN 448
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKS 347
+L+ Y K R+++ + L + +GI D LL + K +E+ K+ +++
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKRE 508
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYC---NCLID-LCVNLNLLEN 403
+ + L + +G KEA E+F +A + LID LC N L+ +
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKN-GLVGS 567
Query: 404 ACKLLE 409
A L++
Sbjct: 568 AVSLID 573
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 16/308 (5%)
Query: 105 RIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
RI+ + FS TL+ G D + +M A + PN+++Y+ ++D +A R +
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ EM ++ + +Y +LL Y + E+ L + REM G++ V YN LL
Sbjct: 429 LNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G DE ++F +MK E+ P+ T+S++I S G EA +F E AG
Sbjct: 489 YGKQGKYDEVKKVFAEMK-REHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRA 547
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
++ + ++LI K V ++ + + GI+P+ +++ ++ E
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATME-----R 602
Query: 343 CVEKSN-SKLGYVVKLLLEEQDIEGD-----FKKEATELFNSISKDVKKAY--CNCLIDL 394
+ SN L + L E + EG+ F + +E N ++KD K+ +C++++
Sbjct: 603 SADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEV 662
Query: 395 CVNLNLLE 402
++ LE
Sbjct: 663 FRKMHQLE 670
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ + G ++ N+++EM ++ ++ +YN LLD + + + I
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + PN +Y++++ + +A ++ L+++ EM+ + L YNTLL++ V
Sbjct: 398 AQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKV 457
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++EA +I +M +S + D T+++++ +GK E + +F EM PNL
Sbjct: 458 GRSEEALDILREM-ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLT 516
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++LI Y K + + G+ D L++ +
Sbjct: 517 YSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDAL 559
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
++ T+GR + K I++ G +++L+ AYGR+ E+ +SV+ MKE G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 209 MQLSVTLYNTLLAMCADVGYT-DEAFEIFEDMKSSENC-QPDSWTFSSMITICSCRGKVS 266
++ ++ YN ++ C G + + F++M+ NC QPD TF+S++ +CS G
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ--RNCVQPDRITFNSLLAVCSRGGLWE 356
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A +F+EM E ++F +L+ K + D L ++P I P+
Sbjct: 357 AARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPN 408
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 111/240 (46%), Gaps = 6/240 (2%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +NE+ ++ STL G G ++E + G + ++ L+ GR+
Sbjct: 227 RRKNEQGKLASAMISTL----GRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSG 282
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLY 216
+ +++ M + GL PN TY +++ A G+ + + EM+ +Q +
Sbjct: 283 LHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITF 342
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N+LLA+C+ G + A +F++M S+ + D +++++++ G++ A + +M
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEM-SNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
PN+ +++I + KA R D+ + + L I D LL++ T+ + E
Sbjct: 402 AKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSE 461
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 215/462 (46%), Gaps = 60/462 (12%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++TL+ +Y G F+ LNV +EM++ G+K + +TYN LL G+ + +VK +
Sbjct: 394 LDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRV 453
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
++EM + PN TY++L+ Y + ++ + V+RE K+ G++ V LY+ L+ A+C
Sbjct: 454 FEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCK 513
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G + A ++M + E +P+ T++S+I G+ AE +++ +E N+
Sbjct: 514 N-GLVESAVSFLDEM-TKEGIRPNVVTYNSII---DAFGRSGSAEC----VIDPPYETNV 564
Query: 285 FVLTS---------------------LIQCYGK--AQRTDD-------------VVRALN 308
++S +I+ +G+ A++T ++ +
Sbjct: 565 SKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFH 624
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK-SNSKLGYVVKLLLEEQDIEG 366
++ EL I P+ +LN ++ E+ L+E + N G LL+ D
Sbjct: 625 KMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNQVYGVAHGLLMGYGD--- 681
Query: 367 DFKKEATELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSR 423
+ +A LF+ + + A+ N L D+ + A ++ G V+ ++ S
Sbjct: 682 NVWVQAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRRHVWENMWSN 741
Query: 424 SPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK--YSDKGL 481
S L L +S GAA +H W+ ++ + G E P LL I TG GKH D L
Sbjct: 742 S----CLDLHLMSSGAARAMVHAWLLNIRSIVFEGHELPQLLSILTGWGKHSKVVGDGAL 797
Query: 482 ASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSSL 523
E+ L + APF + +G F++T A +WL +L
Sbjct: 798 RRAIEALLTGMGAPFRVAKCNLGRFISTGAVVAAWLRESGTL 839
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 160/327 (48%), Gaps = 9/327 (2%)
Query: 89 KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
+L + ++T A NE + AFS LI YG +G D + V+E MK+ G+KPN++TYN
Sbjct: 202 ELAKNVFET-ALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNA 260
Query: 149 LLDTMGRAKRPW-QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
++D G+ + + I+ EM NG+ P+ T+ SLL GR E +++ EM +
Sbjct: 261 VIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYR 320
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++ + YNTLL G D AF+I +M ++ P+ T+S++I + G++ E
Sbjct: 321 GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEM-PRKHIMPNVVTYSTVIDGYAKAGRLDE 379
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
A +FNEM A + +L+ Y K R ++ + + GI D LL
Sbjct: 380 ALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLG 439
Query: 328 VMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA 386
+ K EE+ ++ E ++ + L + +G +EA E+F K KA
Sbjct: 440 GYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKA 499
Query: 387 ---YCNCLID-LCVNLNLLENACKLLE 409
+ LID LC N L+E+A L+
Sbjct: 500 DVVLYSALIDALCKN-GLVESAVSFLD 525
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 3/201 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN +ST+I Y AG D LN++ EMK + + ++YN LL + R +
Sbjct: 357 IMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEAL 416
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ KEM +G+ + TY +LL YG+ E+ V+ EMK + + ++ Y+TL+ +
Sbjct: 417 NVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVY 476
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G EA E+F + K + + D +S++I G V A + +EM + G PN
Sbjct: 477 SKGGLYQEAMEVFREFKKA-GLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPN 535
Query: 284 LFVLTSLIQCYGKAQRTDDVV 304
+ S+I +G++ + V+
Sbjct: 536 VVTYNSIIDAFGRSGSAECVI 556
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ G D + EM + PN++TY+ ++D +A R + ++
Sbjct: 325 DIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLF 384
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + + +Y +LL Y + E+ L+V +EM+ G++ YN LL
Sbjct: 385 NEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQ 444
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +E +FE+MK+ E P+ T+S++I + S G EA +F E +AG + ++ +
Sbjct: 445 GKYEEVKRVFEEMKA-ERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVL 503
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++LI K + V L+ + + GI P+
Sbjct: 504 YSALIDALCKNGLVESAVSFLDEMTKEGIRPN 535
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
++ +GR + K +++ + G +++L+ AYGR+ Y ++ + V+ MK G
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250
Query: 209 MQLSVTLYNTLLAMCADVGYT-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
++ ++ YN ++ C G + A EIF++M + QPD TF+S++ +C G
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRN-GVQPDRITFNSLLAVCGRGGLWEA 309
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A +F+EML G E ++F +L+ K + D + ++ +P I P+
Sbjct: 310 ARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPN 360
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS-MITICSCRGKVSEAEAMFNE 274
Y LL + G +A FE E + + +S MI+I G+V A+ +F
Sbjct: 151 YTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVELAKNVFET 210
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L G+ ++ ++LI YG++ D+ ++ + G+ P+
Sbjct: 211 ALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPN 254
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE
1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 205/423 (48%), Gaps = 18/423 (4%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++++ +++++K+Y ++ + VY+ +K G++P+ TYN L+ R +RP +
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ ++M + GL P +TY SL+ A+G+ + E ++ E+ KG++L + Y+T++ +
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D G +A ++ + MK++ +P T ++ S G EAE + + + + E
Sbjct: 1043 RDSGSDSKAEKLLQMMKNA-GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT-QTPKEELGKLVE 342
+S+I Y +++ + + L + + G+ PD R C + + K E+ L++
Sbjct: 1102 TLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLK 1161
Query: 343 CVEKSNSKLGYVVKLL-----LEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
+E L ++LL L +++G F+K SI + + N L++L
Sbjct: 1162 ALEDIGFDLP--IRLLAGRPELLVSEVDGWFEK-----LKSIEDNAALNFVNALLNLLWA 1214
Query: 398 LNLLENACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA-L 455
L A + +LG+ +++ D+ + W + LS GAAL AL +W++ + A L
Sbjct: 1215 FELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVALTLWLDHMQDASL 1274
Query: 456 ESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
E E P + + TG +Y+ L ++ L E+ +PF + G + + +
Sbjct: 1275 EGYPESPKSVVLITGTA--EYNGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRM 1332
Query: 516 WLE 518
WL+
Sbjct: 1333 WLK 1335
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 118/233 (50%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN R D ++TL+ N DG + V+E+M+A +P++ TYN ++ GR
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++ E+ G P+ TY SLL A+ R R E VY++M++ G YNT
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M G D A ++++DMK PD+ T++ +I + EA A+ +EML+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
G +P L ++LI Y KA + ++ + + G PD+ +L+V+ +
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 38/213 (17%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D ++T+I +YG G D L +Y++MK + G P+ ITY L+D++G+A R + +
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM D G+ P TY++L+ Y +A
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKA---------------------------------- 486
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA + F M S +PD+ +S M+ + + +A ++ +M+ G P+
Sbjct: 487 -GKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYT 544
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPEL-GITP 317
+ +I K R+DD+ + + + EL G+ P
Sbjct: 545 LYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +I+ YG + +V ++ G P++ T+N+L+ + + + I+ M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G SP + LL A E+ V E+++ G ++S + +L A G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTS 289
E +I+ MK++ P + MI + C+GK V +AE M +EM EA F+ L + S
Sbjct: 875 EVKKIYSSMKAA-GYLPTIRLYRMMIELL-CKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+++ Y + V+ R+ E G+ PD+ L+ + + + E G L+
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLL 984
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G + V EE++ +G K + + +LD RA ++VK IY M G P Y
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
++ + + D + EM+E ++ + ++N++L M + + ++++ +K
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
Query: 242 SENCQPDSWTFSSMITICSCRGKV-SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+ +PD T++++I I CR + E + +M G +P L SLI +GK +
Sbjct: 956 T-GLEPDETTYNTLI-IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNV 328
+ + L G+ D F ++ +
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEM---TDNGLSPNWNTYASLLRAYGRARYGEDT 197
PN +L +GR W +++ E+ + + Y +++ Y R+
Sbjct: 189 PNARMVAAILGVLGR----WNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKA 244
Query: 198 LSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT-DEAFEIFEDMKSSENCQPDSWTFSSM 255
+ M+++G + +NTL+ A G T + A E+ DM + +PD+ T++++
Sbjct: 245 QELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL-DMVRNSGLRPDAITYNTL 303
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
++ CS + A +F +M +P+L+ ++I YG+ + R L G
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 316 TPD 318
PD
Sbjct: 364 FPD 366
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
S T+Y TLL C + EA ++F D++ S C+ SM+ + G A +
Sbjct: 680 SSTMYETLLHCCVANEHYAEASQVFSDLRLS-GCEASESVCKSMVVVYCKLGFPETAHQV 738
Query: 272 FNEMLEAGFE----PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
N+ GF P + T +I+ YGK + + L + G TPD + L++
Sbjct: 739 VNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMS 795
Query: 328 VMTQ 331
Q
Sbjct: 796 AYAQ 799
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 190/431 (44%), Gaps = 18/431 (4%)
Query: 101 NEKWRI----DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
NE R+ D + TLI ++ AG D L +Y+ M+A G+ P+ TY+ +++ +G+A
Sbjct: 439 NEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKA 498
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
++ EM + G PN TY ++ +AR + L +YR+M+ G Q Y
Sbjct: 499 GHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTY 558
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+ ++ + GY DEA +F +MK +N PD + ++ + G V +A + ML
Sbjct: 559 SIVMEVLGHCGYLDEAEAVFSEMK-RKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTML 617
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE- 335
G PN+ SL+ + + + D L + ELG+ P + LL+ T+
Sbjct: 618 NTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLSCCTEARSPY 677
Query: 336 ELGKLVECVEKSNSKLGYVVKLLLEEQDIEG----DFKKEATELFNSISKDVKKAYCNCL 391
++G E + + ++ L L +G D + +L +S ++ K+ + +
Sbjct: 678 DMGIYCELMAVTGHP-AHMFLLSLPSAGPDGQNVRDHASKFLDLMHSEDRESKRGLVDAV 736
Query: 392 IDLCVNLNLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWIND 450
+D L E A + E+ VY D ++ + W ++L +S G A+TAL +
Sbjct: 737 VDFLHKSGLKEEAGSVWEVAAQRNVYPDAVKEKGSCYWLINLHVMSDGTAVTALSRTLAW 796
Query: 451 LSKALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKEL----NAPFHDSPDKVGWF 506
+ + P + I TG G+ S +S+ ++EL + PF G F
Sbjct: 797 FRQQMLVSGISPSRIDIVTGWGRR--SRVTGSSMVRQAVQELLHIFSFPFFTENGNSGCF 854
Query: 507 LTTEAAAKSWL 517
+ WL
Sbjct: 855 VGCGEPLNRWL 865
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 159 PWQVKTIYKEMTDN--------------GLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
P+Q + K++ D+ G + + +TY +++ GRA+ + +M
Sbjct: 347 PYQANQVLKQLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQM 406
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ G Q +V YN L+ Y ++A ++F +M+ C+PD T+ ++I I + G
Sbjct: 407 VKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRV-GCEPDRVTYCTLIDIHAKAGF 465
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ A M+ M AG P+ F + +I C GKA + + E G P+
Sbjct: 466 LDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPN 519
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + W D + L+ L+G AGN + Y+ M G++PN+ T N+LL R +
Sbjct: 582 KRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKL 641
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
+ + M + GL+P+ TY LL AR D + +Y E+
Sbjct: 642 ADAYNLLQSMLELGLNPSLQTYTLLLSCCTEARSPYD-MGIYCEL 685
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 191/425 (44%), Gaps = 22/425 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG D +++YE M+ +G+ P+ TY+ +++ +G++ ++
Sbjct: 455 DRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLF 514
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D G PN TY L+ +AR + L +YR+M+ G + Y+ ++ +
Sbjct: 515 CEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYC 574
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY +EA +F +MK + N PD + +I + G V +A ++ ML AG PN+
Sbjct: 575 GYLEEAEAVFFEMKQN-NWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPT 633
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT--QTPKEELGKLVECV 344
SL+ + + R D L + LG+ P + LL+ T Q+P ++G E +
Sbjct: 634 CNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPY-DMGFCCELM 692
Query: 345 EKSNSKLGYVVKLLLEEQDIEG-------DFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
S G+ L+ G D + +L +S ++ K+ + ++D
Sbjct: 693 AVS----GHPAHAFLQSMPAAGPDGQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDFLHK 748
Query: 398 LNLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALE 456
L E A + E+ VY D I+ +S W ++L +S G A+TAL + + +
Sbjct: 749 SGLKEEAGSVWEVAAQKNVYPDAIREKSTCYWLINLHVMSDGTAVTALSRTLAWFRRQML 808
Query: 457 SGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKEL----NAPFHDSPDKVGWFLTTEAA 512
+ P + I TG G+ S +S+ ++EL + PF G F+
Sbjct: 809 ASGVGPNRIDIITGWGRR--SRVTGSSLVRQAVQELLHVFSFPFFTENGNSGCFVGCGEP 866
Query: 513 AKSWL 517
WL
Sbjct: 867 LSQWL 871
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
Y T++ + ++ E M + CQP+ T++ +I + EA +FN+M
Sbjct: 389 YTTMVGILGRAREFGAINKLLEQM-VKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQM 447
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
E G EP+ +LI + KA D + R+ E+G++PD ++N + ++
Sbjct: 448 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 504
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 87 ASKLKEKSYDTRAR------NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
A + K ++Y T + N ++ D +S ++++ G G + V+ EMK
Sbjct: 534 ALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWV 593
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+ Y L+D G+A + Y M GL PN T SLL A+ R D ++
Sbjct: 594 PDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNL 653
Query: 201 YREMKEKGMQLSVTLYNTLLAMCA------DVGYTDEAFEI 235
+ M G+ S+ Y LL+ C D+G+ E +
Sbjct: 654 LQNMVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAV 694
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 103/279 (36%), Gaps = 37/279 (13%)
Query: 56 PTKHSQNPQYPHGKTGSS--PKSYIWV----NPKSPRASKLKEKSYDTRARNEKWRIDPN 109
P+KH+ N GK S K + +V KS A + ++D RA ++ R + N
Sbjct: 213 PSKHTNNNHGAKGKANKSNLAKGFKYVAASGTEKSGAAPNIPVNNHDRRALPQRTRTNSN 272
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F T NF + A K + + L+ P + +
Sbjct: 273 HFVT---------NFGSNMQSSNPQMARPFKESFNKHTRDLNM------PAGIAPTRRHF 317
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY--NTLLAMCADVG 227
T++G + + + R+G T E + S+ Y N +L D
Sbjct: 318 TNSG-----HVVEGVKDILKQLRWGPAT-----EKALYNLNFSIDAYQANQILKQLQD-- 365
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A F +K D T+++M+ I + + +M++ G +PN+
Sbjct: 366 -HSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTY 424
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
LI YG+A + + N++ E+G P DR C L
Sbjct: 425 NRLIHSYGRANYLGEALNVFNQMQEMGCEP-DRVTYCTL 462
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 184/422 (43%), Gaps = 16/422 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG D +++Y+ M+A G+ P+ TY+ +++ +G+A ++
Sbjct: 418 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLF 477
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G +PN T+ ++ + +AR E L +YR+M+ G Q Y+ ++ +
Sbjct: 478 CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 537
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ +EA +F +M+ +N PD + ++ + G V +A + EML AG PN+
Sbjct: 538 GFLEEAEGVFAEMQ-RKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPT 596
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE-ELGKLVECVE 345
SL+ + + R + L + LG+ P + LL+ T ++G + +
Sbjct: 597 CNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMA 656
Query: 346 KSNSKLGYVVKLLLEEQDIEG-------DFKKEATELFNSISKDVKKAYCNCLIDLCVNL 398
S G+ + L + G D + +S ++ K+ + ++D
Sbjct: 657 VS----GHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKS 712
Query: 399 NLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALES 457
L E A + E+ VY D ++ +S + W ++L +S G A+ AL + K +
Sbjct: 713 GLKEEAGSVWEVAAVKNVYPDALREKSCSYWLINLHVMSEGTAVIALSRTLAWFRKQMLV 772
Query: 458 GEEFPPLLGINTGHGKHKY--SDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
+ P + I TG G+ + E L N PF G F+ K
Sbjct: 773 TGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFVGCGEPLKK 832
Query: 516 WL 517
WL
Sbjct: 833 WL 834
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + W D + L+ L+G AGN + Y+EM G++PN+ T N+LL T R R
Sbjct: 551 QRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRM 610
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
+ + + M GL P+ TY LL AR D
Sbjct: 611 SEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFD 647
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 91 KEKSYDTRAR------NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
K ++Y+T + N ++ D +S ++++ G G + V+ EM+ P+
Sbjct: 501 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 560
Query: 145 TYNNLLDTMGRA---KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
Y L+D G+A ++ WQ Y+EM GL PN T SLL + R + ++
Sbjct: 561 VYGLLVDLWGKAGNVEKAWQ---WYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 617
Query: 202 REMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ S+ Y LL+ C D
Sbjct: 618 QSMLALGLHPSLQTYTLLLSCCTD 641
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 217 NTLLAMCADVGYTDE--AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+T M ++G + A D + C+P++ T++ +I ++EA +F +
Sbjct: 350 HTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQ 409
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
M EAG EP+ +LI + KA D + R+ G++PD ++N + +
Sbjct: 410 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKA 467
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F +K + D T+++M+ + + +EM++ G +PN LI
Sbjct: 332 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLI 391
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+A ++ + ++ E G P DR C L
Sbjct: 392 HSYGRANYLNEAMNVFKQMQEAGCEP-DRVTYCTL 425
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 208/447 (46%), Gaps = 22/447 (4%)
Query: 86 RASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RA+ LKE K ++ + + D + TLI ++ AG D +++Y M+ +G+ P+
Sbjct: 407 RANYLKEAVKVFE-EMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDT 465
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
TY+ +++ +G+ + ++ EM +NG +PN TY ++ +AR E+ + +Y++
Sbjct: 466 FTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKD 525
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M+ G + Y+ ++ + G+ DEA +F +M+ + PD + ++ + G
Sbjct: 526 MQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR--RDWAPDEPVYGLLVDLWGKAG 583
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
V +A + ML+ G +PN+ SL+ + K R D L + G+ P +
Sbjct: 584 NVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLARGLVPSVQTYT 643
Query: 324 CLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT----ELFNSI 379
LL+ T + ++G + + + ++ L L + + G ++ T ++ +S
Sbjct: 644 LLLSCCT-VGQAQMGLCCQLMAITGHP-AHMFLLYLPDAEAGGQNVRDHTGYFLDMMHSE 701
Query: 380 SKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLG 438
++ K+ + +ID L E A + E+ VY D ++ +S + W ++L +S G
Sbjct: 702 DRESKRGLMDAVIDFLHKSGLKEEAGFIWEVAAQKNVYPDSVREKSSSYWLINLHLMSEG 761
Query: 439 AALTALH---IWINDLSKALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELN-- 493
A+TAL W + L +G P + I TG G+ + G + V +S K LN
Sbjct: 762 TAVTALSRTLAWFHRQVLTLGTG---PERIDIVTGWGR-RSRVTGSSLVRQSIQKLLNLF 817
Query: 494 -APFHDSPDKVGWFLTTEAAAKSWLES 519
+PF + G F+ WL +
Sbjct: 818 ESPFFTTRGNTGCFVGCGEPLNKWLHN 844
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++ G + Y T++ + E+ ++M S +C+P T++ +I
Sbjct: 352 RQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEM-SRAHCKPTVVTYNRIIHAYGRANY 410
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ EA +F EM EAG+EP+ +LI + KA D + R+ E+G++PD
Sbjct: 411 LKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSV 470
Query: 325 LLNVM 329
++N +
Sbjct: 471 MVNCL 475
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F+ +K + D T+++MI I + + + +EM A +P + +I
Sbjct: 343 ALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRII 402
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+A + V+ + E G P DR C L
Sbjct: 403 HAYGRANYLKEAVKVFEEMQEAGYEP-DRVTYCTL 436
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 189/425 (44%), Gaps = 22/425 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG + + +Y+ M+A G+ P+ TY+ +++ +G+A ++
Sbjct: 407 DRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLF 466
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + G PN TY ++ +AR ++ L +YR+M+ G + Y+ ++ +
Sbjct: 467 CEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHS 526
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY DEA IF +MK +N PD + ++ + G V +A + ML AG PN+
Sbjct: 527 GYLDEAEAIFSEMK-RKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPT 585
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE-ELGKLVECVE 345
SL+ + + R D L + LG+ P + LL+ T+ ++G C
Sbjct: 586 CNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPYDMG----CYC 641
Query: 346 KSNSKLGYVVKLLL--------EEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
+ S G+ + L + Q++ K ++ +S ++ K+ + ++D
Sbjct: 642 ELMSVTGHPAHMFLSSLPSAGPDGQNVRHHVSK-FLDMMHSEDRESKRGLVDAVVDFLHK 700
Query: 398 LNLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALE 456
L E A + E+ VY D ++ +S W ++L +S G A+TAL + + +
Sbjct: 701 SGLKEEAGSVWEIAAQRNVYPDAVKEKSSCYWLINLHVMSEGTAVTALSRTLAWFRRQML 760
Query: 457 SGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKEL----NAPFHDSPDKVGWFLTTEAA 512
P + I TG G+ S +S+ ++EL + PF G F+
Sbjct: 761 VSGVIPSRIDIVTGWGRR--SRVTGSSLVRQAVQELLHIFSFPFFTENGNTGCFVGCGEP 818
Query: 513 AKSWL 517
WL
Sbjct: 819 LSRWL 823
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 171/364 (46%), Gaps = 24/364 (6%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G K + TY ++ +GRAK+ + + +M +G P TY L+ +YGRA Y D
Sbjct: 333 GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDA 392
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ V+ +M++ G + Y TL+ + A G+ + A E+++ M+++ PD++T+S MI
Sbjct: 393 VEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAA-GLSPDTFTYSVMIN 451
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G ++ A+ +F EM+E G PNL +I KA+ + ++ + G P
Sbjct: 452 CLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEP 511
Query: 318 DDRFCGCLLNVMTQTPK-EELGKLVECVEKSN-----SKLGYVVKLLLEEQDIEGDFKKE 371
D ++ V+ + +E + +++ N G +V L + ++E ++
Sbjct: 512 DKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWY 571
Query: 372 ATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE----LGL--TLEVYTDI----- 420
L + +V CN L+ + +N L +A LL+ LGL +L+ YT +
Sbjct: 572 QAMLHAGLCPNVPT--CNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCT 629
Query: 421 QSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLG--INTGHGKHKYSD 478
++RSP + + +S+ H++++ L A G+ + ++ H + + S
Sbjct: 630 EARSPYDMGCYCELMSVTG--HPAHMFLSSLPSAGPDGQNVRHHVSKFLDMMHSEDRESK 687
Query: 479 KGLA 482
+GL
Sbjct: 688 RGLV 691
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N + D +S ++++ G +G D ++ EMK P+ Y L+D G+A
Sbjct: 505 QNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNV 564
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ Y+ M GL PN T SLL A+ R D ++ + M G+ S+ Y L
Sbjct: 565 EKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLL 624
Query: 220 LAMCAD 225
L+ C +
Sbjct: 625 LSCCTE 630
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + W D + L+ L+G AGN + Y+ M G+ PN+ T N+LL R R
Sbjct: 540 KRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRL 599
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + M + GL+P+ TY LL AR D + Y E+ + ++L
Sbjct: 600 PDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEARSPYD-MGCYCELMSVTGHPAHMFLSSL 658
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN 244
+ D F DM SE+
Sbjct: 659 PSAGPDGQNVRHHVSKFLDMMHSED 683
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F +K + D +T+++M+ I + + ++M+ G +P + LI
Sbjct: 321 ALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLI 380
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+A +D V N++ + G P DR C L
Sbjct: 381 HSYGRANYLNDAVEVFNQMQKAGCEP-DRVTYCTL 414
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 213/456 (46%), Gaps = 49/456 (10%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++TL+ +Y G F+ L V +EM + GVK +++TYN LLD G+ + +V +
Sbjct: 396 LDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRV 455
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
+KEM + + PN TY++L+ Y + E+ + V+RE K+ G++ V LY+ L+ A+C
Sbjct: 456 FKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCK 515
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF------NE---- 274
+ G D A + ++M + E +P+ T++S+I G+ + AE + NE
Sbjct: 516 N-GLVDSAVLLLDEM-TKEGIRPNVVTYNSII---DAFGRSTTAEFLVDGVGASNERQSE 570
Query: 275 ----MLEAGFEP--------NLF----VLTSLIQCYGKAQR-----TDDVVRALNRLPEL 313
ML G + ++F L S + K +R ++ ++ EL
Sbjct: 571 SPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHEL 630
Query: 314 GITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEA 372
I P+ +LN ++ E+ L+E + ++++ V LL + +A
Sbjct: 631 EIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLL--MGFSENVWIQA 688
Query: 373 TELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWS 429
LF+ + + A+ N L D+ + A ++ G +V+ + S S
Sbjct: 689 QYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRKVWETLWSDS----C 744
Query: 430 LHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK--YSDKGLASVFES 487
L L +S GAA +H W+ + + G + P LL I TG GKH D L E+
Sbjct: 745 LDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHSKVVGDGALRRAIEA 804
Query: 488 HLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSSL 523
L + APF + +G +++T + +WL+ +L
Sbjct: 805 LLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTL 840
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 8/306 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTIYKE 168
AFS LI YG +G FD + V+E MK G+KPN++TYN ++D G+ + +V I++E
Sbjct: 224 AFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEE 283
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M NG+ P+ TY SLL R E +++ EM ++G+ V YNTLL G
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A+EI +M + P+ T+S+M + G++ +A ++NEM G +
Sbjct: 344 MDLAYEIMLEM-PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYN 402
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKS 347
+L+ Y K R +D ++ + G+ D LL+ + K E+ ++ + ++K
Sbjct: 403 TLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD 462
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA----YCNCLIDLCVNLNLLEN 403
+ L + +G +EA E+F + KA Y + LC N L+++
Sbjct: 463 RVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKN-GLVDS 521
Query: 404 ACKLLE 409
A LL+
Sbjct: 522 AVLLLD 527
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+ + G ++ N++ EM G+ ++ TYN LLD + + + I
Sbjct: 292 DRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIM 351
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + PN TY+++ Y +A ED L++Y EMK G+ L YNTLL++ A +
Sbjct: 352 LEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKL 411
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A ++ ++M SS + D T+++++ +GK +E +F EM + PNL
Sbjct: 412 GRFEDALKVCKEMGSS-GVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLT 470
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++LI Y K ++ + + G+ D L+N +
Sbjct: 471 YSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINAL 513
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 5/247 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
ID + F+ TL+ G D + EM + PN++TY+ + D +A R
Sbjct: 324 IDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDAL 383
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+Y EM G+ + +Y +LL Y + ED L V +EM G++ V YN LL
Sbjct: 384 NLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGY 443
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +E +F++MK + P+ T+S++I + S EA +F E +AG + +
Sbjct: 444 GKQGKFNEVTRVFKEMKK-DRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKAD 502
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+ + + LI K D V L+ + + GI P+ +++ ++ E LV+
Sbjct: 503 VVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEF--LVDG 560
Query: 344 VEKSNSK 350
V SN +
Sbjct: 561 VGASNER 567
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 130/304 (42%), Gaps = 49/304 (16%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
++ T+GR + K +++ G +++L+ AYG++ Y ++ + V+ MK G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 209 MQLSVTLYNTLLAMCADVGYT-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
++ ++ YN ++ C G EIFE+M + QPD T++S++ +CS G
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRN-GVQPDRITYNSLLAVCSRGGLWEA 311
Query: 268 AEAMFNEMLEAGFE-----------------------------------PNLFVLTSLIQ 292
A +FNEM++ G + PN+ +++
Sbjct: 312 ARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMAD 371
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLG 352
Y KA R +D + N + LGI D LL++ + + E L C E +S +
Sbjct: 372 GYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFE-DALKVCKEMGSSGVK 430
Query: 353 YVV---KLLLEEQDIEGDFKKEATELFNSISKDVKKAYCN-----CLIDLCVNLNLLENA 404
V LL+ +G F E T +F + KD + + N LID+ +L E A
Sbjct: 431 KDVVTYNALLDGYGKQGKF-NEVTRVFKEMKKD--RVFPNLLTYSTLIDVYSKGSLYEEA 487
Query: 405 CKLL 408
++
Sbjct: 488 MEVF 491
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
S+MI+ GKV A+ +F L G+ +F ++LI YGK+ D+ ++ +
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 313 LGITPD 318
G+ P+
Sbjct: 251 SGLKPN 256
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 28/168 (16%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP-WQVK 163
+ D +S LI G D + + +EM G++PN++TYN+++D GR+ + V
Sbjct: 500 KADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVD 559
Query: 164 TIYKEMTDNGLSP-------------NWNT------YASLLRA----YGRARYGED---- 196
+ SP NW+ Y L+ + R G++
Sbjct: 560 GVGASNERQSESPSFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRS 619
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
LSV+++M E ++ +V ++ +L C+ ++A + E+++ +N
Sbjct: 620 ILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDN 667
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 213/456 (46%), Gaps = 49/456 (10%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++TL+ +Y G F+ L V +EM + GVK +++TYN LLD G+ + +V +
Sbjct: 396 LDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRV 455
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
+KEM + + PN TY++L+ Y + E+ + V+RE K+ G++ V LY+ L+ A+C
Sbjct: 456 FKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCK 515
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF------NE---- 274
+ G D A + ++M + E +P+ T++S+I G+ + AE + NE
Sbjct: 516 N-GLVDSAVLLLDEM-TKEGIRPNVVTYNSII---DAFGRSTTAEFLVDGVGASNERQSE 570
Query: 275 ----MLEAGFEP--------NLF----VLTSLIQCYGKAQR-----TDDVVRALNRLPEL 313
ML G + ++F L S + K +R ++ ++ EL
Sbjct: 571 SPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHEL 630
Query: 314 GITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEA 372
I P+ +LN ++ E+ L+E + ++++ V LL + +A
Sbjct: 631 EIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDNQVYGVAHGLL--MGFSENVWIQA 688
Query: 373 TELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWS 429
LF+ + + A+ N L D+ + A ++ G +V+ + S S
Sbjct: 689 QYLFDEVKQMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRKVWETLWSDS----C 744
Query: 430 LHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK--YSDKGLASVFES 487
L L +S GAA +H W+ + + G + P LL I TG GKH D L E+
Sbjct: 745 LDLHLMSSGAARAMVHAWLLGIHSVVFEGHQLPKLLSILTGWGKHSKVVGDGALRRAIEA 804
Query: 488 HLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSSL 523
L + APF + +G +++T + +WL+ +L
Sbjct: 805 LLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTL 840
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 8/306 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTIYKE 168
AFS LI YG +G FD + V+E MK G+KPN++TYN ++D G+ + +V I++E
Sbjct: 224 AFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEE 283
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M NG+ P+ TY SLL R E +++ EM ++G+ V YNTLL G
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A+EI +M + P+ T+S+M + G++ +A ++NEM G +
Sbjct: 344 MDLAYEIMLEM-PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYN 402
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKS 347
+L+ Y K R +D ++ + G+ D LL+ + K E+ ++ + ++K
Sbjct: 403 TLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD 462
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA----YCNCLIDLCVNLNLLEN 403
+ L + +G +EA E+F + KA Y + LC N L+++
Sbjct: 463 RVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKN-GLVDS 521
Query: 404 ACKLLE 409
A LL+
Sbjct: 522 AVLLLD 527
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+ + G ++ N++ EM G+ ++ TYN LLD + + + I
Sbjct: 292 DRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIM 351
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + PN TY+++ Y +A ED L++Y EMK G+ L YNTLL++ A +
Sbjct: 352 LEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKL 411
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A ++ ++M SS + D T+++++ +GK +E +F EM + PNL
Sbjct: 412 GRFEDALKVCKEMGSS-GVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLT 470
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++LI Y K ++ + + G+ D L+N +
Sbjct: 471 YSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINAL 513
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 5/247 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
ID + F+ TL+ G D + EM + PN++TY+ + D +A R
Sbjct: 324 IDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDAL 383
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+Y EM G+ + +Y +LL Y + ED L V +EM G++ V YN LL
Sbjct: 384 NLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGY 443
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +E +F++MK + P+ T+S++I + S EA +F E +AG + +
Sbjct: 444 GKQGKFNEVTRVFKEMKK-DRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKAD 502
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+ + + LI K D V L+ + + GI P+ +++ ++ E LV+
Sbjct: 503 VVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEF--LVDG 560
Query: 344 VEKSNSK 350
V SN +
Sbjct: 561 VGASNER 567
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 130/304 (42%), Gaps = 49/304 (16%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
++ T+GR + K +++ G +++L+ AYG++ Y ++ + V+ MK G
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 209 MQLSVTLYNTLLAMCADVGYT-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
++ ++ YN ++ C G EIFE+M + QPD T++S++ +CS G
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRN-GVQPDRITYNSLLAVCSRGGLWEA 311
Query: 268 AEAMFNEMLEAGFE-----------------------------------PNLFVLTSLIQ 292
A +FNEM++ G + PN+ +++
Sbjct: 312 ARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMAD 371
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLG 352
Y KA R +D + N + LGI D LL++ + + E L C E +S +
Sbjct: 372 GYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFE-DALKVCKEMGSSGVK 430
Query: 353 YVV---KLLLEEQDIEGDFKKEATELFNSISKDVKKAYCN-----CLIDLCVNLNLLENA 404
V LL+ +G F E T +F + KD + + N LID+ +L E A
Sbjct: 431 KDVVTYNALLDGYGKQGKF-NEVTRVFKEMKKD--RVFPNLLTYSTLIDVYSKGSLYEEA 487
Query: 405 CKLL 408
++
Sbjct: 488 MEVF 491
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
S+MI+ GKV A+ +F L G+ +F ++LI YGK+ D+ ++ +
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 313 LGITPD 318
G+ P+
Sbjct: 251 SGLKPN 256
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 28/168 (16%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP-WQVK 163
+ D +S LI G D + + +EM G++PN++TYN+++D GR+ + V
Sbjct: 500 KADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVD 559
Query: 164 TIYKEMTDNGLSP-------------NWNT------YASLLRA----YGRARYGED---- 196
+ SP NW+ Y L+ + R G++
Sbjct: 560 GVGASNERQSESPTFMLIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRS 619
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
LSV+++M E ++ +V ++ +L C+ ++A + E+++ +N
Sbjct: 620 ILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEELRLFDN 667
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 207/447 (46%), Gaps = 22/447 (4%)
Query: 86 RASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RA+ LKE K ++ + + D + TLI ++ AG D +++Y M+ +G+ P+
Sbjct: 407 RANYLKEAVKVFE-EMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDT 465
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
TY+ +++ +G+ + ++ EM +NG +PN TY ++ +AR E+ + +Y++
Sbjct: 466 FTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKD 525
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M+ G + Y+ ++ + G+ DEA +F +M+ + PD + ++ + G
Sbjct: 526 MQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR--RDWAPDEPVYGLLVDLWGKAG 583
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
V +A + ML+ G +PN+ SL+ + K R D L + G+ P +
Sbjct: 584 NVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQGLVPSVQTYT 643
Query: 324 CLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT----ELFNSI 379
LL+ T+ + ++G L + ++ L L + + G ++ T ++ +S
Sbjct: 644 LLLSCCTEA-QAQMG-LCGQLMAITGHPAHMFLLYLPDAEPGGQNVRDHTGYFLDMMHSE 701
Query: 380 SKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLG 438
++ K+ + +ID L E A + E+ VY D ++ +S + W ++L +S G
Sbjct: 702 DRESKRGLMDAVIDFLHKSGLKEEAGLIWEVAAQKNVYPDSVREKSSSYWLINLHLMSEG 761
Query: 439 AALTALH---IWINDLSKALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNA- 494
A+TAL W + L +G P + I TG G+ + G + V +S K LN
Sbjct: 762 TAVTALSRTLAWFHRQILTLGTG---PERIDIVTGWGR-RSRVTGSSLVRQSVQKLLNLF 817
Query: 495 --PFHDSPDKVGWFLTTEAAAKSWLES 519
PF + G F+ WL +
Sbjct: 818 EFPFFTTRGNTGCFVGCGEPLNKWLHN 844
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++ G + Y T++ + ++ ++M S +C+P T++ +I
Sbjct: 352 RQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEM-SRAHCKPTVVTYNRIIHAYGRANY 410
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ EA +F EM EAG+EP+ +LI + KA D + R+ E+G++PD
Sbjct: 411 LKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSA 470
Query: 325 LLNVM 329
++N +
Sbjct: 471 MVNCL 475
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F+ +K + D T+++MI I + + + +EM A +P + +I
Sbjct: 343 ALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRII 402
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+A + V+ + E G P DR C L
Sbjct: 403 HAYGRANYLKEAVKVFEEMQEAGYEP-DRVTYCTL 436
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 188/419 (44%), Gaps = 10/419 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D + F++L+ +Y AGNFD VY+ + G++P+ TYN L+ R+ RP +
Sbjct: 916 FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGF 975
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T+ EM GL+P +Y SLL A +A E ++ EM+ K QL+ ++Y+ ++ +
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +A + MK + +P T ++T G+ EAE + N + + E +
Sbjct: 1036 RNAGNHSKAENLLAVMK-EDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVS 1094
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+++ Y K D ++ L + G+ PD + C + + + L
Sbjct: 1095 TLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAIL--- 1151
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATEL--FNSISKDVKKAYCNCLIDLCVNLNLL 401
+ KS G+ + + L + + A L ++ + N + DL
Sbjct: 1152 LLKSLQDCGFDLPIRLLTERTPSLLSEIANYLEELEALEDSAALNFVNAVEDLLWAFECR 1211
Query: 402 ENACKLLELGLTLEVYTDIQSR-SPTQWSLHLKSLSLGAALTALHIWINDLSKA-LESGE 459
A ++ +L + +Y D R + W + LS GAAL L +W++ + A L+
Sbjct: 1212 ATASRIFQLAVERSIYRDNVFRVAQKDWGADFRKLSAGAALVGLTLWLDHMQDASLQGSP 1271
Query: 460 EFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
E P + + TG G +Y+ L ++L E+ +PF + G F+ + K WL+
Sbjct: 1272 ESPKSVVLVTGEG--EYNMVSLRKTIRAYLLEMGSPFLPCRARSGRFVVKAYSLKMWLK 1328
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R R D ++TLI + N + + V+EEM A +P++ TYN ++ GR +
Sbjct: 284 VRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++ E+ + G P+ TY SLL A+ + + E+ + G + + YNT
Sbjct: 344 AEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNT 403
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M +G D A ++++M++ C PD+ T++ MI K++EA + +M +A
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAV-GCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADA 462
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
G +P L ++LI Y K R D + + + G+ PD +L+V ++ + E
Sbjct: 463 GLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETE 520
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I +YG G D + +Y+EM+A+G P+ +TY ++D++G+ + + + ++M
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMA 460
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D GL P +++L+ AY + D + M G++ Y +L + A G T+
Sbjct: 461 DAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETE 520
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ ++ M ++N +PD + ++ + K E E + +M E + +L V++++
Sbjct: 521 KMLRLYRTMM-NDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDM-ELLCQMSLGVISTI 578
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLVECV 344
+ KA+ + L + G PD + ++N T K E G L+EC+
Sbjct: 579 LI---KARCVSQGGKLLKKACLQGYKPDAKSLWSIMNAYVMTEKHEEGLSLLECI 630
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R P+ + +++ G + ++ L+ +E + A P +L +GRA++ +
Sbjct: 152 RATPDEVAFVVRAVGES-SWRRALDAFEWL-ARSTAPASRAVAVVLGVLGRARQDSIAEE 209
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGR------ARYGEDT--------------------- 197
++ G + + +++ Y R AR DT
Sbjct: 210 VFLRFAGEGATVQ--VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARS 267
Query: 198 ----------LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
L + E+++ G++ V YNTL++ C+ ++A +FE+M +SE C+P
Sbjct: 268 KSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASE-CRP 326
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D WT+++M+++ GK EAE +F E++E GF P+ SL+ + K D V
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTC 386
Query: 308 NRLPELGITPDD 319
L + G ++
Sbjct: 387 EELVKAGFKKNE 398
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G D V E++ + K + T +LD +A ++V IY M G PN + Y
Sbjct: 829 GRLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 888
Query: 182 ---ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
SLL + R R D + EM+ G + ++++N+LL M G D ++++
Sbjct: 889 RSMTSLLCHHNRFR---DVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQS 945
Query: 239 MKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
+ + +PD T++++I + CR + E + NEM + G P L SL+ KA
Sbjct: 946 ILEA-GLEPDEDTYNTLI-VMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKA 1003
Query: 298 Q 298
+
Sbjct: 1004 E 1004
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+N L+ + + + ++ M G P ++ ++RA ++ V E++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQ 842
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+ ++S + +L A G E +I+ MK++ P+ + SM ++ +
Sbjct: 843 DMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAA-GYLPNMHLYRSMTSLLCHHNRF 901
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+ E M EM AGF+P+L + SL+ Y A D + + E G+ PD+ L
Sbjct: 902 RDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTL 961
Query: 326 LNVMTQTPKEELG 338
+ + ++ + E G
Sbjct: 962 IVMYCRSLRPEEG 974
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 68 GKTGSSPK--SYIWVNPKSPRASKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGN 123
GK G +PK SY + S +A +L+E++ R++ ++++ + + ++K+Y AGN
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKA-ELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGN 1040
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
N+ MK G++P + T + L+ + G A +P + + + + + L + Y++
Sbjct: 1041 HSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYST 1100
Query: 184 LLRAYGRARYGEDTLSVYR--EMKEKGMQ 210
+ AY + G+ L + + EMK G++
Sbjct: 1101 VFDAY--LKNGDYDLGIKKLLEMKRDGVE 1127
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 191/425 (44%), Gaps = 22/425 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG D +++YE M+ +G+ P+ TY+ +++ +G++ ++
Sbjct: 452 DRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLF 511
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D G PN TY L+ +AR + L +YR+M+ G + Y+ ++ +
Sbjct: 512 CEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHC 571
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY +EA +F +M+ + + PD + ++ + G V +A ++ ML AG PN+
Sbjct: 572 GYLEEAEAVFFEMRQN-HWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPT 630
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT--QTPKEELGKLVECV 344
SL+ + + R D L + LG+ P + LL+ T Q+P ++G E +
Sbjct: 631 CNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPY-DMGFCCELM 689
Query: 345 EKSNSKLGYVVKLLLEEQDIEG-------DFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
S G+ L+ G D + +L +S ++ K+ + ++D
Sbjct: 690 AVS----GHPAHAFLQSMPAAGPDGQNVRDHVSKFLDLMHSEDREGKRGLVDAVVDFLHK 745
Query: 398 LNLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALE 456
L E A + E+ VY D ++ +S W ++L +S G A+TAL + + +
Sbjct: 746 SGLKEEAGSVWEVAAQKNVYPDAVKEKSTCYWLINLHVMSDGTAVTALSRTLAWFRRQML 805
Query: 457 SGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKEL----NAPFHDSPDKVGWFLTTEAA 512
+ P + I TG G+ S +S+ ++EL + PF G F+
Sbjct: 806 ASGVGPNRIDIVTGWGRR--SRVTGSSLVRQAVQELLHVFSFPFFTENSNSGCFVGCGEP 863
Query: 513 AKSWL 517
WL
Sbjct: 864 LSQWL 868
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
Y T++ + ++ E M + CQP+ T++ +I + EA +FN+M
Sbjct: 386 YTTMVGILGRAREFGAINKLLEQM-VKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQM 444
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
E G EP+ +LI + KA D + R+ E+G++PD ++N + ++
Sbjct: 445 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 501
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R W D + L+ L+G AGN + Y M G+ PN+ T N+LL R R
Sbjct: 585 RQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRL 644
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + M GL+P+ TY LL
Sbjct: 645 PDAYNLLQNMVTLGLNPSLQTYTLLL 670
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 87 ASKLKEKSYDTR------ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
A + K ++Y T +N ++ D +S ++++ G G + V+ EM+
Sbjct: 531 ALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWV 590
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+ Y L+D G+A + Y M GL PN T SLL A+ R D ++
Sbjct: 591 PDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNL 650
Query: 201 YREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ S+ Y LL+ C +
Sbjct: 651 LQNMVTLGLNPSLQTYTLLLSCCTE 675
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 194/441 (43%), Gaps = 43/441 (9%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN+ D ++T++ ++ GNFD ++ M+ G +++TYN LLD+ G+ +
Sbjct: 322 RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKF 381
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +EM G SPN TY++L+ AY + + D +++++++K+ G+Q V LY+TL
Sbjct: 382 REAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTL 441
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ C G DEA + E+M + +P+ T++S++ +A M+
Sbjct: 442 VDGCCKNGSPDEALALLEEM-ADNGIRPNVITYNSLL----------DAYGRQCLMVRKT 490
Query: 280 FEPNLFVLTSLIQCYGKAQRTDD----------------VVRALNRLPELGITPDDRFCG 323
F F L + K DD R + + G+ P+
Sbjct: 491 FPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFS 550
Query: 324 CLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFN---SI 379
+LN + E+ L+E + + ++ V LL I ++A LFN ++
Sbjct: 551 SILNACSHCASVEDASNLLEAMRVFDGRVYGVTHGLLMGFRIR--VWRDAETLFNELTTL 608
Query: 380 SKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGA 439
+ A+ N L D+ + + A V+ S Q+ L L +S+G+
Sbjct: 609 GHNTAVAFYNALTDVLWHFEQAQAAKD-------RHVWDKAWWHSEQQFFLDLHFMSVGS 661
Query: 440 ALTALHIWINDLSKAL-ESGEEFPPLLGINTGHGKHKY--SDKGLASVFESHLKELNAPF 496
A LH+W+ + K L + P + I TG GKH + + E+HL E+N+PF
Sbjct: 662 AQAMLHLWLLYIRKFLCQRRSVLPKYMSILTGWGKHSKVPGESAVKRAVEAHLLEMNSPF 721
Query: 497 HDSPDKVGWFLTTEAAAKSWL 517
H + G + + WL
Sbjct: 722 HVWGNNEGRLVCAGYQVQGWL 742
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 8/298 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S+LI YG +G + ++E MK + KPN++ YN ++D + I++EM
Sbjct: 157 VYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREM 215
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G+SP+ T+ +L+ A GRA E+ ++ EM+E+G+ YNTL+A G
Sbjct: 216 LEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQM 275
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ E M S +P T+S+MI + G EA A+F EM EP+ +
Sbjct: 276 HLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNT 335
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
++ + + D+ + E G D LL+ + K E L+E +++
Sbjct: 336 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 395
Query: 349 SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
+ + L + + F ++A LF +DVKKA D+ + L++ CK
Sbjct: 396 ASPNILTYSALIDAYCKHGFHRDAMALF----QDVKKA--GLQPDVVLYSTLVDGCCK 447
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI G A ++ C ++ EM+ G+ + +TYN L+ T R + +
Sbjct: 223 DRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM 282
Query: 167 KEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +G+ P+ TY++++ Y + + +++++EM+ + ++ YNT++ + A
Sbjct: 283 ETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHAR 342
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G DEA I M+ + + D T+++++ +GK EA ++ EM + G PN+
Sbjct: 343 LGNFDEAHSIRRAMEEAGFAK-DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 401
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN--VMTQTPKEELGKLVEC 343
++LI Y K D + + + G+ PD L++ +P E L L E
Sbjct: 402 TYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 461
Query: 344 VE 345
+
Sbjct: 462 AD 463
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 42/248 (16%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEM---KAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+ P+ +++ G +G ++ + ++ M + + + + +T + ++ ++GR R
Sbjct: 81 LGPDDLPFIVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVT-STIISSLGRLGRSDWA 139
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ I+ G N Y+SL+ AYGR+
Sbjct: 140 QLIFDRAVGAGFGNNVFVYSSLICAYGRS------------------------------- 168
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G +A EIFE MK C+P+ ++++I CS G A +F EMLE G P
Sbjct: 169 ----GKLAKAVEIFEAMKVV--CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSP 222
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLV 341
+ +LI G+A R ++ R + E GI DD L+ + + LG L+
Sbjct: 223 DRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM 282
Query: 342 ECVEKSNS 349
E + KS+
Sbjct: 283 ETMAKSSG 290
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 195/423 (46%), Gaps = 17/423 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ G + +++Y M+ +G+ P+ TY+ +++ +G+ ++
Sbjct: 435 DRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLF 494
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +NG +PN TY ++ +AR E+ + +Y++M+ G + Y+ ++ +
Sbjct: 495 CEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHC 554
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ DEA +F +M+ + PD + ++ + G V +A ++ ML+ G +PN+
Sbjct: 555 GHLDEAEAVFIEMR--HDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPT 612
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
SL+ + K R D L + G+ P + LL+ T+ + ++G + +
Sbjct: 613 CNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSCCTEA-QAQMGLCCQLMAI 671
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEATELF----NSISKDVKKAYCNCLIDLCVNLNLLE 402
+ ++ L L + + G ++ T F +S ++ K+ + +ID L E
Sbjct: 672 TGHP-AHMFLLYLPDAEPGGQNVRDHTRYFLDMMHSEDRESKRGLMDAVIDFLHKSGLKE 730
Query: 403 NACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEF 461
A + E+ VY D ++ + P+ W ++L +S G A+TAL + + + + +
Sbjct: 731 EAGFIWEVAAQRNVYPDSVREKDPSYWLINLHLMSEGTAVTALSRTLAWFHRQILTMGKC 790
Query: 462 PPLLGINTGHGKHKYSDKGLASVFES-----HLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
P + I TG G+ + G + V +S HL E PF + G F+ W
Sbjct: 791 PERIDIVTGWGR-RSRVTGSSLVRQSVQKLLHLFEF--PFVTTRGNTGCFVGCGEPLNRW 847
Query: 517 LES 519
L +
Sbjct: 848 LHN 850
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G + ++Y +++ G+AR + EM + +V YN ++ Y EA
Sbjct: 361 GFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREA 420
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
++FE+M+ + +PD T+ ++I I + G + A ++ M E G P+ F ++++
Sbjct: 421 VKVFEEMQKA-GYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVN 479
Query: 293 CYGKAQRTDDVVRALNRLPELGITPD 318
C GK + + E G TP+
Sbjct: 480 CLGKGGHLAAAYKLFCEMVENGCTPN 505
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W D + L+ L+G AGN D L Y M G++PN+ T N+LL + R
Sbjct: 571 WAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAY 630
Query: 164 TIYKEMTDNGLSPNWNTYASLL 185
++ + M GL P+ TY LL
Sbjct: 631 SVLQNMLAQGLVPSLQTYTLLL 652
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++ G + Y T++ + ++ ++M S +C+P T++ +I
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSV-HCKPTVVTYNRIIHAYGRANY 416
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ EA +F EM +AG+EP+ +LI + K + + R+ E+G++PD
Sbjct: 417 LREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSA 476
Query: 325 LLNVM 329
++N +
Sbjct: 477 MVNCL 481
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 193/426 (45%), Gaps = 9/426 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG D +++Y+ M+A G+ P+ TY+ +++ +G+A ++
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D G +PN TY ++ + +AR ++ L +YR+M+ G + Y+ ++ +
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY +EA +F +M+ +N PD + ++ + G V +A + ML AG PN+
Sbjct: 553 GYLEEAEAVFTEMQ-QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ-TPKEELGKLVECVE 345
SL+ + + + + L + LG+ P + LL+ T K ++G + +
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMA 671
Query: 346 KSNSKLG-YVVKLLLEEQDIEG--DFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLE 402
+ +++K+ D E + +L +S ++ K+ + ++D E
Sbjct: 672 STGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKE 731
Query: 403 NACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEF 461
A + E+ V+ D ++ +S + W ++L +S G A+TAL + K + +
Sbjct: 732 EAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTC 791
Query: 462 PPLLGINTGHGKHKY--SDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLES 519
P + I TG G+ + E L +PF G F+ + WL
Sbjct: 792 PSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWL-L 850
Query: 520 RSSLVS 525
+S LVS
Sbjct: 851 QSHLVS 856
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 152/329 (46%), Gaps = 11/329 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N RID + ++K GN G Y + G K + TY ++ +GRAK+
Sbjct: 323 QNLGLRIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQF 380
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM +G PN TY L+ +YGRA Y + ++V+ +M+E G + Y TL
Sbjct: 381 GAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + A G+ D A ++++ M++ PD++T+S +I G + A +F EM++ G
Sbjct: 441 IDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
PNL ++ + KA+ + ++ + G PD ++ V+ E +
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 340 LV--ECVEKS----NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
V E +K+ G +V L + ++E ++ L + +V CN L+
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT--CNSLLS 617
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQS 422
+ +N + A +LL+ L L + +Q+
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQT 646
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T + + W D + L+ L+G AGN + Y+ M G++PN+ T N+LL T R
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + + + M GL P+ TY LL
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA--- 156
+N + D +S ++++ G G + V+ EM+ P+ Y L+D G+A
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
++ WQ Y+ M GL PN T SLL + R + + + M G++ S+ Y
Sbjct: 591 EKAWQ---WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Query: 217 NTLLAMCAD 225
LL+ C D
Sbjct: 648 TLLLSCCTD 656
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 188/418 (44%), Gaps = 8/418 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG D +++Y+ M+A G+ P+ TY+ +++ +G+A ++
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D G +PN TY ++ + +AR ++ L +YR+M+ G + Y+ ++ +
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY +EA +F +M+ +N PD + ++ + G V +A + ML AG PN+
Sbjct: 553 GYLEEAEAVFTEMQ-QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ-TPKEELGKLVECVE 345
SL+ + + + + L + LG+ P + LL+ T K ++G + +
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMA 671
Query: 346 KSNSKLG-YVVKLLLEEQDIEG--DFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLE 402
+ +++K+ D E + +L +S ++ K+ + ++D E
Sbjct: 672 STGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKE 731
Query: 403 NACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEF 461
A + E+ V+ D ++ +S + W ++L +S G A+TAL + K + +
Sbjct: 732 EAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTC 791
Query: 462 PPLLGINTGHGKHKY--SDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWL 517
P + I TG G+ + E L +PF G F+ + WL
Sbjct: 792 PSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWL 849
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 11/329 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N RID + ++K GN G Y + G K + TY ++ +GRAK+
Sbjct: 323 QNLGLRIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQF 380
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM +G PN TY L+ +YGRA Y + ++V+ +M+E G + Y TL
Sbjct: 381 GAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + A G+ D A ++++ M++ PD++T+S +I G + A +F EM++ G
Sbjct: 441 IDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELG 338
PNL ++ + KA+ + ++ + G PD ++ V+ EE
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 339 KLVECVEKSN-----SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
+ +++ N G +V L + ++E ++ L + +V CN L+
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT--CNSLLS 617
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQS 422
+ +N + A +LL+ L L + +Q+
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQT 646
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T + + W D + L+ L+G AGN + Y+ M G++PN+ T N+LL T R
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + + + M GL P+ TY LL
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA--- 156
+N + D +S ++++ G G + V+ EM+ P+ Y L+D G+A
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
++ WQ Y+ M GL PN T SLL + R + + + M G++ S+ Y
Sbjct: 591 EKAWQ---WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Query: 217 NTLLAMCAD 225
LL+ C D
Sbjct: 648 TLLLSCCTD 656
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 123/237 (51%), Gaps = 1/237 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D A++ LI+ +G +G D + ++ EMK G +P+ TY L++ +G+A R + ++
Sbjct: 97 QLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARS 156
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ M + GL+PN TY L+ A+ + + L ++ EMK +G Q SV YN LL
Sbjct: 157 FFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALC 216
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G A ++F M + + C PDS+T+S+++ G+V EA +F EM++ G +L
Sbjct: 217 SAGRVGAARKLFHKM-TGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
SL+ KA D V + + + G PD +++ + + K + + V
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREV 332
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 8/272 (2%)
Query: 71 GSSPKSYIW---VNP--KSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
G SP SY + VN KS R + + + R +D +++L+ AGN D
Sbjct: 235 GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVA--VDLVNYNSLLATLAKAGNMD 292
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ +EM G P+ ++N ++D +G+A +P + ++ M ++G P+ +Y L+
Sbjct: 293 RVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILI 352
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
+Y R + EM E G YN+L+ A G DEAF + E+M+++ C
Sbjct: 353 DSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA-GC 411
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+PD T++ ++ + RG+ A +F +M + G EP+ I R D+ +
Sbjct: 412 RPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALV 471
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
+ +G D L+ + EL
Sbjct: 472 LFKDMKAVGCPVDKAMYRILIRAAHRAGDTEL 503
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 43/288 (14%)
Query: 71 GSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFD 125
GS P Y + VN +A +++E A E+ + PN ++ L+ + G D
Sbjct: 130 GSEPDEYTYGFLVNALG-KAGRVQEARSFFDAMLERG-LTPNIPTYNLLMDAFRKVGQLD 187
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTM-------------------------------- 153
L ++ EMK G +P+++TYN LLD +
Sbjct: 188 MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLV 247
Query: 154 ---GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
G++ R + +++EM D G++ + Y SLL +A + + +EM KG
Sbjct: 248 NGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFH 307
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+NT++ D A E+F M S C+PD +++ +I + G ++A
Sbjct: 308 PDAFSFNTIMDALGKANKPDAAREVFARMVES-GCKPDLISYNILIDSYARFGDAAQARQ 366
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M EM+EAGF P SLI + D+ L + G PD
Sbjct: 367 MLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPD 414
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 122 GNFDGCLNVYEEMKAIG--VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
G D + +EM A G ++PN T L+ GR + ++ + SP +
Sbjct: 9 GILDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVH 66
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
+ L+ + E VY+++ +KG QL YN L+ G D A E+F +M
Sbjct: 67 AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
K + +PD +T+ ++ G+V EA + F+ MLE G PN+ L+ + K +
Sbjct: 127 K-IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQ 185
Query: 300 TDDVVRALNRLPELGITP 317
D + + G P
Sbjct: 186 LDMALGLFAEMKRRGFQP 203
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 189/422 (44%), Gaps = 16/422 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG D +++Y+ M+A G+ P+ TY+ +++ +G+A ++
Sbjct: 550 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 609
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D G +PN TY ++ + +AR ++ L +YR+M+ G + Y+ ++ +
Sbjct: 610 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 669
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY +EA +F +M+ +N PD + ++ + G V +A + ML AG PN+
Sbjct: 670 GYLEEAEAVFTEMQ-QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 728
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ-TPKEELGKLVECVE 345
SL+ + + + + L + LG+ P + LL+ T K ++G + +
Sbjct: 729 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMA 788
Query: 346 KSNSKLGYVVKLLLEEQDIEG----DFKKEAT---ELFNSISKDVKKAYCNCLIDLCVNL 398
+ G+ + L + G + + A +L +S ++ K+ + ++D
Sbjct: 789 ST----GHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKS 844
Query: 399 NLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALES 457
E A + E+ V+ D ++ +S + W ++L +S G A+TAL + K + +
Sbjct: 845 GQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLA 904
Query: 458 GEEFPPLLGINTGHGKHKY--SDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
P + I TG G+ + E L +PF G F+ +
Sbjct: 905 SGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNR 964
Query: 516 WL 517
WL
Sbjct: 965 WL 966
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 152/329 (46%), Gaps = 11/329 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N RID + ++K GN G Y + G K + TY ++ +GRAK+
Sbjct: 440 QNLGLRIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQF 497
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM +G PN TY L+ +YGRA Y + ++V+ +M+E G + Y TL
Sbjct: 498 GAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 557
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + A G+ D A ++++ M++ PD++T+S +I G + A +F EM++ G
Sbjct: 558 IDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 616
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELG 338
PNL ++ + KA+ + ++ + G PD ++ V+ EE
Sbjct: 617 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 676
Query: 339 KLVECVEKSN-----SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
+ +++ N G +V L + ++E ++ L + +V CN L+
Sbjct: 677 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT--CNSLLS 734
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQS 422
+ +N + A +LL+ L L + +Q+
Sbjct: 735 TFLRVNKIAEAYELLQNMLALGLRPSLQT 763
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T + + W D + L+ L+G AGN + Y+ M G++PN+ T N+LL T R
Sbjct: 680 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 739
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + + + M GL P+ TY LL
Sbjct: 740 NKIAEAYELLQNMLALGLRPSLQTYTLLL 768
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA--- 156
+N + D +S ++++ G G + V+ EM+ P+ Y L+D G+A
Sbjct: 648 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 707
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
++ WQ Y+ M GL PN T SLL + R + + + M G++ S+ Y
Sbjct: 708 EKAWQ---WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 764
Query: 217 NTLLAMCAD 225
LL+ C D
Sbjct: 765 TLLLSCCTD 773
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 195/431 (45%), Gaps = 23/431 (5%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN+ D ++T++ ++ GNFD ++ M+ G +++TYN LLD+ G+ +
Sbjct: 323 RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKF 382
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +EM G SPN TY++L+ AY + + D +++++++K+ G+Q V LY+TL
Sbjct: 383 REAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTL 442
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-----TICSCRGKVSEAEAMFNE 274
+ C G DEA + E+M + +P+ T++S++ R +
Sbjct: 443 VDGCCKNGSPDEALALLEEM-ADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLP 501
Query: 275 MLEAGFEPNL-FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
+ +P++ + SL+ K R + + G+ P+ +LN +
Sbjct: 502 RVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCA 561
Query: 334 K-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFN---SISKDVKKAYCN 389
E+ L+E + + ++ V LL I ++A LFN ++ + A+ N
Sbjct: 562 SVEDASSLLEAMRVFDGRVYGVTHGLLMGFRIR--VWRDAETLFNELTTLGHNTAVAFYN 619
Query: 390 CLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWIN 449
L D+ + + A V+ S Q+ L L +S+G+A LH+W+
Sbjct: 620 ALTDVLWHFEQAKAAKD-------RHVWDKAWWHSEQQFFLDLHFMSVGSAQAMLHLWLL 672
Query: 450 DLSKAL-ESGEEFPPLLGINTGHGKHKY--SDKGLASVFESHLKELNAPFHDSPDKVGWF 506
+ K L + P + I TG GKH + + E+HL E+N+PFH + G
Sbjct: 673 YIRKFLCQRRSVLPKYMSILTGWGKHSKVPGESAVKRAVEAHLLEMNSPFHVWGNNEGRL 732
Query: 507 LTTEAAAKSWL 517
+ + WL
Sbjct: 733 VCAGYQVQGWL 743
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 8/298 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S+LI YG +G + ++E MK + KPN++ YN ++D + I++EM
Sbjct: 158 VYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREM 216
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G+SP+ T+ +L+ A GRA E+ ++ EM+E+G+ YNTL+A G
Sbjct: 217 LEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQM 276
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ E M S +P T+S+MI + G EA A+F EM EP+ +
Sbjct: 277 HLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNT 336
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
++ + + D+ + E G D LL+ + K E L+E +++
Sbjct: 337 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 396
Query: 349 SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
+ + L + + F ++A LF +DVKKA D+ + L++ CK
Sbjct: 397 ASPNILTYSALIDAYCKHGFHRDAMALF----QDVKKA--GLQPDVVLYSTLVDGCCK 448
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI G A ++ C ++ EM+ G+ + +TYN L+ T R + +
Sbjct: 224 DRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM 283
Query: 167 KEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +G+ P+ TY++++ Y + + +++++EM+ + ++ YNT++ + A
Sbjct: 284 ETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHAR 343
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G DEA I M+ + + D T+++++ +GK EA ++ EM + G PN+
Sbjct: 344 LGNFDEAHSIRRAMEEAGFAK-DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 402
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN--VMTQTPKEELGKLVEC 343
++LI Y K D + + + G+ PD L++ +P E L L E
Sbjct: 403 TYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEM 462
Query: 344 VE 345
+
Sbjct: 463 AD 464
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 42/248 (16%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEM---KAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+ P+ +++ G +G ++ + ++ M + + + + +T + ++ ++GR R
Sbjct: 82 LGPDDLPFIVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVT-STIISSLGRLGRSDWA 140
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ I+ G N Y+SL+ AYGR+
Sbjct: 141 QLIFDRAVGAGFGNNVFVYSSLICAYGRS------------------------------- 169
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G +A EIFE MK C+P+ ++++I CS G A +F EMLE G P
Sbjct: 170 ----GKLAKAVEIFEAMKVV--CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSP 223
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLV 341
+ +LI G+A R ++ R + E GI DD L+ + + LG L+
Sbjct: 224 DRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM 283
Query: 342 ECVEKSNS 349
E + KS+
Sbjct: 284 ETMAKSSG 291
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 185/422 (43%), Gaps = 16/422 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG D +++Y+ M+ G+ P+ TY+ +++ +G+A ++
Sbjct: 428 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLF 487
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G +PN T+ ++ + +AR E L +YR+M+ G Q Y+ ++ +
Sbjct: 488 CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ +EA +F +M+ +N PD + ++ + G V +A + ML+AG PN+
Sbjct: 548 GFLEEAEGVFAEMQ-RKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPT 606
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE-ELGKLVECVE 345
SL+ + + R + L + LG+ P + LL+ T ++G + +
Sbjct: 607 CNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMA 666
Query: 346 KSNSKLGYVVKLLLEEQDIEG-------DFKKEATELFNSISKDVKKAYCNCLIDLCVNL 398
S G+ + L + G D + +S ++ K+ + ++D
Sbjct: 667 VS----GHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKS 722
Query: 399 NLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALES 457
L E A + E+ VY D ++ +S + W ++L +S G A+ AL + K +
Sbjct: 723 GLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRTLAWFRKQMLV 782
Query: 458 GEEFPPLLGINTGHGKHKY--SDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
+ P + I TG G+ + E L N PF G F+ + K+
Sbjct: 783 SGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFVGSGEPLKN 842
Query: 516 WL 517
WL
Sbjct: 843 WL 844
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + W D + L+ L+G AGN D Y+ M G++PN+ T N+LL T R R
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 620
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
+ + + M GL P+ TY LL AR D
Sbjct: 621 SEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFD 657
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 217 NTLLAMCADVGYTDEAFEI--FEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+T M ++G + EI D + C+P++ T++ +I + EA +FN+
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
M EAG EP+ +LI + KA D + R+ E G++PD ++N + +
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 91 KEKSYDTRAR------NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
K ++Y+T + N ++ D +S ++++ G G + V+ EM+ P+
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 145 TYNNLLDTMGRA---KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
Y L+D G+A + WQ Y+ M GL PN T SLL + R + ++
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQ---WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 202 REMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ S+ Y LL+ C D
Sbjct: 628 QSMLALGLHPSLQTYTLLLSCCTD 651
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F +K + D T+++M+ + E + +EM+ G +PN LI
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+A + + N++ E G P DR C L
Sbjct: 402 HSYGRANYLKEAMNVFNQMQEAGCEP-DRVTYCTL 435
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 182/419 (43%), Gaps = 16/419 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +TL+ +Y GNFD + VY + G++PN TYN L+ R RP + T+
Sbjct: 763 DLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLL 822
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM GL+P +Y SLL A G+A+ E ++ E++ KG +L+ +LY+ L+ + D
Sbjct: 823 NEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDA 882
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+A ++ MK + +P T ++T G EAE + N + + E +
Sbjct: 883 CNHSKAEQLLASMK-EDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLP 941
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LGKLV 341
+++ Y K + + L + G+ PD + C + + + L L
Sbjct: 942 YSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAASLCERTADAILLLNSLR 1001
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLL 401
+C + ++LL E E +++ + N L DL
Sbjct: 1002 DC------EFDLPIRLLTERTSSLLTEVSNFLEELDALEDSAALNFVNALEDLLWAFECR 1055
Query: 402 ENACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA-LESGE 459
A + +L + +Y ++ W + LS GAALTAL +W++ + A L+
Sbjct: 1056 ATASYVFQLAVDKSIYRHNVFRVVEKDWGADFRKLSAGAALTALTLWLDQMQDASLQGSP 1115
Query: 460 EFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
E P + + TG G +Y+ L ++L E+ +PF + G F+ + K WL+
Sbjct: 1116 ESPKSIVLVTGEG--EYNMVSLRKTIRAYLLEMGSPFLPCKTRSGRFVAKSYSLKMWLK 1172
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 117/234 (50%), Gaps = 1/234 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R R D ++TLI N D + V+EEM A +P++ TYN ++ GR +
Sbjct: 126 VRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGK 185
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ +++E+ + G P+ TY SLL A+ + + V E+ G + YNT
Sbjct: 186 AQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNT 245
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M +G D A ++++M++ C PD+ T++ +I ++S+A + EM +A
Sbjct: 246 MIHMYGKMGRLDLALGLYDEMRAL-GCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADA 304
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
G +P L ++LI Y K R ++ VR + + G+ PD +L+++ ++
Sbjct: 305 GLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARS 358
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 115/235 (48%), Gaps = 5/235 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D ++T+I +YG G D L +Y+EM+A+G P+ +TY L+D++G+ R
Sbjct: 236 FKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAG 295
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM D GL P T+++L+ AY + E+ + + M G++ Y +L +
Sbjct: 296 KVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDII 355
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A G + +++ M ++ +PD+ + M+ + + E EA+ +M E + N
Sbjct: 356 ARSGDMRKLMALYQTMM-NDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDM-EVVCQMN 413
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
+++S++ KA+ + L + G PD + +L+ T K E G
Sbjct: 414 PQLVSSILI---KAECISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEG 465
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G D + +E++ +G K + T +LD +A ++V IY M + G PN + Y
Sbjct: 673 GRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIY 732
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
S++ R + D + EM+ G + +T+ NTLL M G D+ E++ +
Sbjct: 733 RSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILE 792
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+ +P+ T++++I + S + E + NEM + G P L SL+ GKA+
Sbjct: 793 A-GLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAK 848
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 102/259 (39%), Gaps = 36/259 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D N + LI A F V+ +M+ IG++P+ Y +++ + P +
Sbjct: 518 DCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLM 577
Query: 167 KEMTDNGLSPN-WNTYASLLRAYGRAR-----------------------------YGED 196
E +G+S N ++ +++ AYG+ + Y E
Sbjct: 578 DEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSIDRRIWNALIHAYAES 637
Query: 197 TL-----SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
L +V+ M EKG ++ N ++ G DE + I ++++ + T
Sbjct: 638 GLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDM-GFKISKST 696
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
M+ + G + E ++N M EAG+ PN+ + S+I + +R DV + +
Sbjct: 697 VILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEME 756
Query: 312 ELGITPDDRFCGCLLNVMT 330
G PD LL + T
Sbjct: 757 RAGFEPDLTILNTLLLMYT 775
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 68 GKTGSSPK--SYIWVNPKSPRASKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGN 123
GK G +PK SY + S +A KL E++ R++ +R++ + + L+K+Y A N
Sbjct: 826 GKKGLTPKLESYKSLLAASGKA-KLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACN 884
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+ MK G++P + T + L+ + G A P + + + + + L + Y++
Sbjct: 885 HSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYST 944
Query: 184 LLRAYGRARYGEDTLSVYR--EMKEKGMQ 210
+ AY + G+ L + + EMK G++
Sbjct: 945 VFNAY--LKNGDYNLGITKLLEMKADGVK 971
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 158/322 (49%), Gaps = 24/322 (7%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R R D ++TLI N D + V+EEM A +P++ TYN ++ GR +
Sbjct: 284 VRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++KE+ + G P+ TY SLL A+ + E V E+ + G + YNT
Sbjct: 344 AQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNT 403
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M +G D A ++++M++ C PD+ T++ ++ ++SEA + EM +A
Sbjct: 404 MIHMYGKMGRLDLALGLYDEMRAI-GCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADA 462
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +P L ++LI Y K+ R DD R +R+ E G+ PD +L+V ++ +E
Sbjct: 463 GLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS--DETR 520
Query: 339 KLVECVEKSNSKLGY-----VVKLLL-------EEQDIEGDFKK-EATELFNS--ISKDV 383
KL+ + ++ K GY + ++LL E +IEG + EA N IS +
Sbjct: 521 KLM-VLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSIL 579
Query: 384 KKAYCNCLIDLCVNLNLLENAC 405
KA C + +LL+ AC
Sbjct: 580 IKAEC-----ISQGASLLKRAC 596
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 187/422 (44%), Gaps = 16/422 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D +TL+ +Y GNFD + VY + G++P+ TYN L+ R RP +
Sbjct: 918 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 977
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T+ EM GL+P +Y LL A G+A+ E ++ EM+ KG +L+ ++Y+ ++ +
Sbjct: 978 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 1037
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ +A + MK + +P T ++T G EAE + N + + E +
Sbjct: 1038 RNARNHSKAEHLLSAMK-EDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEIS 1096
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPEL---GITPDDRFCGCLLNVMTQTPKEELGKL 340
++++ Y R D + +L E+ G+ PD + + + + + L
Sbjct: 1097 TLPYSTVLDAY---LRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAIL 1153
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT--ELFNSISKDVKKAYCNCLIDLCVNL 398
+ KS G+ + + L + F + + E ++ + N L DL
Sbjct: 1154 ---LLKSLQDCGFDLPIRLLTERTSSLFTEVDSFLEKLGTLEDSASLNFVNALEDLLWAF 1210
Query: 399 NLLENACKLLELGLTLEVY-TDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA-LE 456
A + +L + +Y +I W L+ LS GAAL AL +W++ + A L+
Sbjct: 1211 ERRATASWIFQLAVKRSIYHHNIFRVEEKDWGADLRKLSAGAALVALTLWLDQMQDASLQ 1270
Query: 457 SGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
E P + + TG G +Y+ L ++L E+ +PF + G F+ + K W
Sbjct: 1271 GAPESPKSIVLVTGEG--EYNMVSLRKTIRAYLLEMGSPFLPCRSRSGRFVVKAYSLKMW 1328
Query: 517 LE 518
L+
Sbjct: 1329 LK 1330
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 5/235 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R D ++T+I +YG G D L +Y+EM+AIG P+ +TY L+D++G+ R +
Sbjct: 394 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAG 453
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM D GL P T+++L+ AY ++ +D + M E G++ Y +L +
Sbjct: 454 KVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVF 513
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A T + ++ M + +PD + ++ + + E E + +M EA FE N
Sbjct: 514 ARSDETRKLMVLYRAM-IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM-EAVFEMN 571
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
V++S++ KA+ L R G PD + +L+ + K E G
Sbjct: 572 PLVISSILI---KAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKG 623
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G D V +E++ + +K + T +L+ +A ++V IY M G PN + Y
Sbjct: 831 GRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 890
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
++ + D + EM+ G + + + NTLL M G D E++ +
Sbjct: 891 RIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILE 950
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+ +PD T++++I + S + E + EM + G P L L+ GKA+
Sbjct: 951 A-GLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAK 1006
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 65 YPHGKTGSSPK--SYIWVNPKSPRASKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGT 120
Y GK G +PK SY + S +A KL E++ R + +R++ + + ++K+Y
Sbjct: 981 YEMGKRGLTPKLESYKILLAASGKA-KLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRN 1039
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
A N ++ MK G++P + T + L+ + G + P + + + + + L +
Sbjct: 1040 ARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLP 1099
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y+++L AY R R ++ EMK G++ ++ + + + TD+A + +K
Sbjct: 1100 YSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILL---LK 1156
Query: 241 SSENCQPD 248
S ++C D
Sbjct: 1157 SLQDCGFD 1164
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 75/195 (38%), Gaps = 37/195 (18%)
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI-- 235
WN +L+ AY + E +++ M +KG +V N ++ G DE + +
Sbjct: 785 WN---ALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQ 841
Query: 236 ---------------------------FEDMKSSENCQ-----PDSWTFSSMITICSCRG 263
FE MK + P+ + MI++
Sbjct: 842 ELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNK 901
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
+ + E M EM AGF+P+L VL +L+ Y D + + + E G+ PD+
Sbjct: 902 RFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYN 961
Query: 324 CLLNVMTQTPKEELG 338
L+ + ++ + E G
Sbjct: 962 TLIVMYSRNFRPEEG 976
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 158/322 (49%), Gaps = 24/322 (7%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R R D ++TLI N D + V+EEM A +P++ TYN ++ GR +
Sbjct: 124 VRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGK 183
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++KE+ + G P+ TY SLL A+ + E V E+ + G + YNT
Sbjct: 184 AQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNT 243
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M +G D A ++++M++ C PD+ T++ ++ ++SEA + EM +A
Sbjct: 244 MIHMYGKMGRLDLALGLYDEMRAI-GCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADA 302
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +P L ++LI Y K+ R DD R +R+ E G+ PD +L+V ++ +E
Sbjct: 303 GLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARS--DETR 360
Query: 339 KLVECVEKSNSKLGY-----VVKLLL-------EEQDIEGDFKK-EATELFNS--ISKDV 383
KL+ + ++ K GY + ++LL E +IEG + EA N IS +
Sbjct: 361 KLM-VLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSIL 419
Query: 384 KKAYCNCLIDLCVNLNLLENAC 405
KA C + +LL+ AC
Sbjct: 420 IKAEC-----ISQGASLLKRAC 436
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 187/422 (44%), Gaps = 16/422 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D +TL+ +Y GNFD + VY + G++P+ TYN L+ R RP +
Sbjct: 758 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 817
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T+ EM GL+P +Y LL A G+A+ E ++ EM+ KG +L+ ++Y+ ++ +
Sbjct: 818 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 877
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ +A + MK + +P T ++T G EAE + N + + E +
Sbjct: 878 RNARNHSKAEHLLSAMK-EDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEIS 936
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPEL---GITPDDRFCGCLLNVMTQTPKEELGKL 340
++++ Y R D + +L E+ G+ PD + + + + + L
Sbjct: 937 TLPYSTVLDAY---LRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAIL 993
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT--ELFNSISKDVKKAYCNCLIDLCVNL 398
+ KS G+ + + L + F + + E ++ + N L DL
Sbjct: 994 ---LLKSLQDCGFDLPIRLLTERTSSLFTEVDSFLEKLGTLEDSASLNFVNALEDLLWAF 1050
Query: 399 NLLENACKLLELGLTLEVY-TDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA-LE 456
A + +L + +Y +I W L+ LS GAAL AL +W++ + A L+
Sbjct: 1051 ERRATASWIFQLAVKRSIYHHNIFRVEEKDWGADLRKLSAGAALVALTLWLDQMQDASLQ 1110
Query: 457 SGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
E P + + TG G +Y+ L ++L E+ +PF + G F+ + K W
Sbjct: 1111 GAPESPKSIVLVTGEG--EYNMVSLRKTIRAYLLEMGSPFLPCRSRSGRFVVKAYSLKMW 1168
Query: 517 LE 518
L+
Sbjct: 1169 LK 1170
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 5/235 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R D ++T+I +YG G D L +Y+EM+AIG P+ +TY L+D++G+ R +
Sbjct: 234 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAG 293
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM D GL P T+++L+ AY ++ +D + M E G++ Y +L +
Sbjct: 294 KVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVF 353
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A T + ++ M + +PD + ++ + + E E + +M EA FE N
Sbjct: 354 ARSDETRKLMVLYRAM-IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM-EAVFEMN 411
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
V++S++ KA+ L R G PD + +L+ + K E G
Sbjct: 412 PLVISSILI---KAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKG 463
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G D V +E++ + +K + T +L+ +A ++V IY M G PN + Y
Sbjct: 671 GRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 730
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
++ + D + EM+ G + + + NTLL M G D E++ +
Sbjct: 731 RIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILE 790
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+ +PD T++++I + S + E + EM + G P L L+ GKA+
Sbjct: 791 A-GLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAK 846
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 65 YPHGKTGSSPK--SYIWVNPKSPRASKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGT 120
Y GK G +PK SY + S +A KL E++ R + +R++ + + ++K+Y
Sbjct: 821 YEMGKRGLTPKLESYKILLAASGKA-KLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRN 879
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
A N ++ MK G++P + T + L+ + G + P + + + + + L +
Sbjct: 880 ARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLP 939
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y+++L AY R R ++ EMK G++ ++ + + + TD+A + +K
Sbjct: 940 YSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILL---LK 996
Query: 241 SSENCQPD 248
S ++C D
Sbjct: 997 SLQDCGFD 1004
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 75/195 (38%), Gaps = 37/195 (18%)
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI-- 235
WN +L+ AY + E +++ M +KG +V N ++ G DE + +
Sbjct: 625 WN---ALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQ 681
Query: 236 ---------------------------FEDMKSSENCQ-----PDSWTFSSMITICSCRG 263
FE MK + P+ + MI++
Sbjct: 682 ELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNK 741
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
+ + E M EM AGF+P+L VL +L+ Y D + + + E G+ PD+
Sbjct: 742 RFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYN 801
Query: 324 CLLNVMTQTPKEELG 338
L+ + ++ + E G
Sbjct: 802 TLIVMYSRNFRPEEG 816
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 194/446 (43%), Gaps = 21/446 (4%)
Query: 86 RASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RA+ L E S R + + D + TLI ++ AG D L++Y++M+ + P+
Sbjct: 426 RANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTF 485
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY+ +++ +G+A ++ EM D G PN TY ++ +AR L +YR+M
Sbjct: 486 TYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDM 545
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ G Q Y+ ++ + G+ +EA IF +MK +N PD + ++ + G
Sbjct: 546 QNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMK-RKNWVPDEPVYGLLVDLWGKVGN 604
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
V ++ + ML AG PN+ SL+ + + R D L + LG+ P +
Sbjct: 605 VEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTL 664
Query: 325 LLNVMTQTPKE-ELGKLVECVEKSNSKLGYVVKLLLEEQDIEG-------DFKKEATELF 376
LL+ T+ ++G E + + G+ + L G D + +L
Sbjct: 665 LLSCCTEARSSFDMGFCGELMAVT----GHPAHMFLLSMPAAGPDGQNVRDHVSKFLDLM 720
Query: 377 NSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSL 435
+S ++ K+ + ++D L E A + E+ VY D ++ +S W ++L +
Sbjct: 721 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVREKSSCYWLINLHFM 780
Query: 436 SLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKEL--- 492
S G A+TAL + + + P + I TG G+ S AS+ ++EL
Sbjct: 781 SDGTAVTALSRTLAWFHREMLVSGTVPSRIDIVTGWGRR--SRVTGASLVRQAVQELLHI 838
Query: 493 -NAPFHDSPDKVGWFLTTEAAAKSWL 517
+ PF G F+ WL
Sbjct: 839 FSFPFFTENGNSGCFVGRGEPLGRWL 864
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F +K + D T+++M+ I + + EM+ G +PN+ LI
Sbjct: 362 ALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLI 421
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+A ++ V +R+ E G P DR C L
Sbjct: 422 HSYGRANYLNEAVSVFDRMQEAGCQP-DRVTYCTL 455
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++ G + Y T++ + ++ +M + CQP+ T++ +I
Sbjct: 371 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEM-VRDGCQPNVVTYNRLIHSYGRANY 429
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
++EA ++F+ M EAG +P+ +LI + KA D + ++ E ++PD
Sbjct: 430 LNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSV 489
Query: 325 LLNVM 329
++N +
Sbjct: 490 IINCL 494
>gi|356526577|ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 878
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 209/464 (45%), Gaps = 58/464 (12%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+D +++TL+ LY G F+ + ++EM+ G+K +++TYN L++ GR + +V+
Sbjct: 399 RLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVQK 458
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC 223
++ EM + PN TY++L++ Y + R + + VYRE+K++GM+ V Y+ L+ A+C
Sbjct: 459 LFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALC 518
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG---F 280
+ G + + + D+ + + +P+ T++S+I ++ E + +A
Sbjct: 519 KN-GLIESSLRLL-DVMTEKGSRPNVVTYNSIIDAFKIGQQLPALECAVDTPFQANEHQI 576
Query: 281 EP-------------------NLFVLTSLIQCYG---------KAQRTDD--VVRALNRL 310
+P N ++ L Q K R D+ +V+ ++
Sbjct: 577 KPSSSRLIVGNFQDQKTDIGNNDEIMKMLEQLAAEKAGLTKKDKRSRQDNFFIVQIFQKM 636
Query: 311 PELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKL-GYVVKLLLEEQDIEGDF 368
E+ I P+ +LN + ++ KL++ + +S++ G LL+ + D
Sbjct: 637 HEMEIKPNVVTFSAILNACSCCETFQDASKLLDALRVFDSQVYGVAHGLLMGHRQGIWDQ 696
Query: 369 KKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
+ + + A+ N L D+ + +LG + V I+ R+ W
Sbjct: 697 TQTLFDELEHLDSSTASAFYNALTDMLWHFG--------QKLGAQMVV---IEGRNRNVW 745
Query: 429 -------SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK--YSDK 479
SL L S GAA +H W+ +L + G++ PP+L I TG GKH +
Sbjct: 746 KGGWSTESLDLHLTSCGAACAMVHTWLLELRTTVFGGQKLPPILSILTGWGKHSKVVGNG 805
Query: 480 GLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSSL 523
L E+ L + APF S +G F + +WL S+L
Sbjct: 806 TLRKAVEALLNGIGAPFQISECNLGRFKSEGPEVAAWLRQPSTL 849
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 2/224 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D +++L+K G + C ++ EM+ G+ ++ TYN +D + + R + I
Sbjct: 295 DRLTYNSLLKTCVAKGRWKLCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAI 354
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM + PN TY++L+ Y +A ED L++Y EMK ++L YNTL+ + A+
Sbjct: 355 DVEMPAKNIWPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYAN 414
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G+ +EA F++M+ + D T++++I K E + +F+EM PN
Sbjct: 415 LGWFEEAVGKFKEMECC-GIKNDVVTYNALIEGYGRHNKYVEVQKLFDEMKARRIYPNDL 473
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++LI+ Y K + + + L + G+ D F L++ +
Sbjct: 474 TYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDAL 517
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 149/342 (43%), Gaps = 77/342 (22%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY-KE 168
+FS +I G F +++ M G++PN++TYN ++D + + +++ + +E
Sbjct: 227 SFSAMISALGRNNRFSEAVSLLRSMGKFGLEPNLVTYNAIIDAGAKGELTFEIVVKFLEE 286
Query: 169 MTDNGLSPNWNTYASLLR---AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC- 223
M G P+ TY SLL+ A GR + D L+ EM+ KG+ V YNT + A+C
Sbjct: 287 MIAAGCMPDRLTYNSLLKTCVAKGRWKLCRDLLA---EMEWKGIGRDVYTYNTYVDALCK 343
Query: 224 ----------ADV-------------------GYT-----DEAFEIFEDMKSSENCQPDS 249
DV GY+ ++A I+++MK + D
Sbjct: 344 GGRMDLARHAIDVEMPAKNIWPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLL-IRLDR 402
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++++++ + + G EA F EM G + ++ +LI+ YG+ + +V + +
Sbjct: 403 VSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVQKLFDE 462
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFK 369
+ I P+D L+ + T+ ++ E D+ + K
Sbjct: 463 MKARRIYPNDLTYSTLIKIYTKG-----------------------RMYAEAMDVYRELK 499
Query: 370 KEATELFNSISKDVKKAYCNCLID-LCVNLNLLENACKLLEL 410
+E + DV + + LID LC N L+E++ +LL++
Sbjct: 500 QEG------MKTDV--VFYSALIDALCKN-GLIESSLRLLDV 532
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 107/248 (43%), Gaps = 7/248 (2%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
S +I+ G + L+++EE + G + +++ ++ +GR R + ++ + M
Sbjct: 194 SNMIRTLGRLKKIELALDLFEESRTRGYGNTVYSFSAMISALGRNNRFSEAVSLLRSMGK 253
Query: 172 NGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL PN TY +++ A + E + EM G YN+LL C G
Sbjct: 254 FGLEPNLVTYNAIIDAGAKGELTFEIVVKFLEEMIAAGCMPDRLTYNSLLKTCVAKGRWK 313
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA-EAMFNEMLEAGFEPNLFVLTS 289
++ +M+ + D +T+++ + G++ A A+ EM PN+ ++
Sbjct: 314 LCRDLLAEME-WKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNIWPNVVTYST 372
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELGKL--VECVE 345
L+ Y KA+R +D + + + L I D L+ + +E +GK +EC
Sbjct: 373 LMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCG 432
Query: 346 KSNSKLGY 353
N + Y
Sbjct: 433 IKNDVVTY 440
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 124/227 (54%), Gaps = 3/227 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TL+ +YG G ++ ++V + MK GV+P + TYN L+ +P + +
Sbjct: 136 PNVVTYNTLVDVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAV 195
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y+ + +G +PN TY +L+ AYG+ L VY+EM + M+ SV Y++L++ C
Sbjct: 196 YQRLLSDGYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEK 255
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A IF +M+ +NC P++ T++S++T C+ G+ +A +F +M G P++
Sbjct: 256 AGQWETALRIFNEMQ-QDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAHGCTPDVV 314
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
T+LI Y + + ++A ++ G PD +++ + +T
Sbjct: 315 TYTALISAYERGGQWQKALQAFGKMCMQGCKPDAIVYNAIIDTLWET 361
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 187/433 (43%), Gaps = 28/433 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ I L + + D + + EM+ ++ N+ T+ L++ + + IY
Sbjct: 67 DVYSYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEIY 126
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M PN TY +L+ YG+ E + V MK++G++ + YNTL+ C
Sbjct: 127 NNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQEGVEPVLRTYNTLIIACNMC 186
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +++ + S+ P+S T++++I+ ++ +A ++ EML E ++
Sbjct: 187 NQPREALAVYQRLL-SDGYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVIT 245
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+SLI KA + + +R N + + P+ L+ Q + E K E E+
Sbjct: 246 YSSLISACEKAGQWETALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQWE--KATEVFEQ 303
Query: 347 SNSK------LGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKK---AYCNCLIDLCVN 397
+ + Y L+ + G ++K A + F + K N +ID
Sbjct: 304 MTAHGCTPDVVTYTA--LISAYERGGQWQK-ALQAFGKMCMQGCKPDAIVYNAIIDTLWE 360
Query: 398 LNLLENACKLLELGLTLEVYTDIQS----RSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
++ + L+L LT + R + ++L +++ G A+ L+ W+ ++ +
Sbjct: 361 TGIIWAQGRALQLFLTAVQQGHFRQEPVVRRAGRVEVNLHAMTAGVAMVCLYCWLLEIKR 420
Query: 454 -ALESG-EEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEA 511
A E G P L I T GK ++G V E+ ++ F D+P + L +
Sbjct: 421 IAAEKGLAGLPQTLAIVTDMGKAS-REQGNCIVKEAVAAMMS--FWDAPFR----LVQDG 473
Query: 512 AAKSWLESRSSLV 524
A S LE+ S+ V
Sbjct: 474 AYASVLEATSAQV 486
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 129/248 (52%), Gaps = 2/248 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
EK+ +D A++T++ Y +G + ++++++M+ IG+ P ++TYN +LD G+ R W
Sbjct: 210 EKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWG 269
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + EM GL + T ++++ A GR ++ E+K G + +YN++L
Sbjct: 270 RILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSML 329
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA I ++M+ + NC PDS T++ + G + E A+ + M G
Sbjct: 330 QVFGKAGIYTEALSILKEMEDN-NCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGV 388
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
PN T++I YGKA R DD +R +++ +LG P+ +L ++ + + E
Sbjct: 389 MPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIK 448
Query: 341 VECVEKSN 348
V C K N
Sbjct: 449 VLCEMKLN 456
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++++++++G AG + L++ +EM+ P+ ITYN L T RA + + MT
Sbjct: 325 YNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMT 384
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN TY +++ AYG+A +D L ++ +MK+ G +V YN++LAM T+
Sbjct: 385 SKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTE 444
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ ++ +MK + C P+ T+++M+ +CS GK + + EM GFEP+ +L
Sbjct: 445 DVIKVLCEMKLN-GCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTL 503
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I Y + D + + + G TP LLN +
Sbjct: 504 ISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAH 544
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L Y AG D + V + M + GV PN ITY ++D G+A R ++
Sbjct: 356 DSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLF 415
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M D G +PN TY S+L G+ ED + V EMK G + +NT+LA+C++
Sbjct: 416 SKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEE 475
Query: 227 GYTDEAFEIFEDMKSSENC--QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + ++ +MK NC +PD TF+++I+ + G ++ M+ EM+++GF P +
Sbjct: 476 GKHNYVNKVLREMK---NCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCV 532
Query: 285 FVLTSLIQCYGKAQRTD 301
+L+ A R D
Sbjct: 533 TTYNALLNAL--AHRGD 547
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N + D + F+TLI Y G+ +Y EM G P + TYN LL+ +
Sbjct: 489 KNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDW 548
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+++ ++M G PN +Y+ LL Y +A V +E+ + + S L TL
Sbjct: 549 KAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTL 608
Query: 220 L---AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+ C + + AF D +PD +SM+++ S S+A M + +
Sbjct: 609 VLSNHKCRHLRGMERAF----DQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIH 664
Query: 277 EAGFEPNLFVLTSLIQCYGKAQ---RTDDVVRAL-NRLPE 312
E G +PNLF L+ Y + + ++V++ + N +PE
Sbjct: 665 ECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPE 704
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E+++D + + ++ D ++++ ++ F + + G++PN+ TYN L+D
Sbjct: 622 ERAFD-QLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMD 680
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
R W+ + + K + ++ P+ +Y ++++ + R ++ + V EM KG+Q
Sbjct: 681 LYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQP 740
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ YNT L+ A + DEA E+ M NC+P T+ ++ GK EA
Sbjct: 741 TIVTYNTFLSGYAGMELFDEANEVIRFM-IEHNCRPSELTYKILVDGYCKAGKHEEA 796
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 7/228 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T++ + G + V EMK G +P+ T+N L+ + R +
Sbjct: 460 PNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKM 519
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM +G +P TY +LL A + SV ++M+ KG + + T Y+ LL +
Sbjct: 520 YGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSK 579
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS--CRGKVSEAEAMFNEMLEAGFEPN 283
G E E P SW + + + CR + E F+++ + G++P+
Sbjct: 580 AGNV-RGIEKVEKEIYDGQVFP-SWILLRTLVLSNHKCR-HLRGMERAFDQLQKYGYKPD 636
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
L V+ S++ + + + L+ + E G+ P+ CL+++ +
Sbjct: 637 LVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVR 684
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 100/233 (42%), Gaps = 7/233 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++S L+ Y AGN G V +E+ V P+ I L+ + + + ++
Sbjct: 565 PNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERA 624
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ G P+ S+L + R + + + E G+Q ++ YN L+ +
Sbjct: 625 FDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVR 684
Query: 226 VGYTDEAFEIFEDMKSSENC--QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
DE ++ E +K +N +PD +++++I +G + EA + +EM G +P
Sbjct: 685 ---EDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPT 741
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ + + Y + D+ + + E P + L++ + K E
Sbjct: 742 IVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHE 794
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+IK + G + V EM G++P ++TYN L + + +
Sbjct: 706 DVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVI 765
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+ M ++ P+ TY L+ Y +A E+ + ++KE
Sbjct: 766 RFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKE 805
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 8/140 (5%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIG---VKPNMITYNNLLDTMGRAKRPW 160
+ PN F+ L+ LY D C E +K I +P++++YN ++ R
Sbjct: 668 LQPNLFTYNCLMDLYVRE---DECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQ 724
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + EMT G+ P TY + L Y ++ V R M E + S Y L+
Sbjct: 725 EAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILV 784
Query: 221 AMCADVGYTDEAFEIFEDMK 240
G +EA + +K
Sbjct: 785 DGYCKAGKHEEAMDFVTKIK 804
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 122/227 (53%), Gaps = 3/227 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TLI +YG G ++ + V MK GV+P + TYN L+ +P + +
Sbjct: 278 PNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAV 337
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
YK M D G SPN TY +L+ AYG+A + + V++EM KG + SV Y++L++ C
Sbjct: 338 YKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEK 397
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A E+F +M + E C P++ T++S+IT C+ + +A +F +M + G P++
Sbjct: 398 AGQWELALELFNEM-AGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVV 456
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
T+LI Y K + + A ++ PD +++ + +T
Sbjct: 457 TFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAIIDTLWET 503
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 3/231 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR-PWQVKTI 165
D ++ +I + + D +++ +EM+ ++ N+ TY L++ + P + T
Sbjct: 209 DVYTYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDT- 267
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y M +G PN TY +L+ YG+ E + V MK +G++ + YNTL+ C
Sbjct: 268 YNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNM 327
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA +++ M E P++ T++++I+ G++ + +F EM+ G E ++
Sbjct: 328 CGQPREAMAVYKRML-DEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVI 386
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+SLI KA + + + N + G P+ L+ Q + E
Sbjct: 387 TYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWE 437
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E + + ++ LI YG AG D + V++EM G + ++ITY++L+ +A
Sbjct: 340 RMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAG 399
Query: 158 RPWQVKT-IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ W++ ++ EM G PN TY SL+ A + E V+ +M++ G V +
Sbjct: 400 Q-WELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTF 458
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV---SEAEAMFN 273
L++ G A +E M+ + C+PD+ F+++I G + +A A+F
Sbjct: 459 TALISSYEKGGQWRRALGAYEQMR-LQRCKPDAIVFNAIIDTLWETGVIWAQRKALALFQ 517
Query: 274 EMLEAG 279
+ +E G
Sbjct: 518 QAVEDG 523
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 184/422 (43%), Gaps = 15/422 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ +G D + +YE+M+ G+ P+ TY+ +++ +G+A ++
Sbjct: 448 DRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLF 507
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M D G PN TY ++ +AR E L +YR+M++ G + Y ++ +
Sbjct: 508 CRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHC 567
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ +EA IF +M+ +N PD + ++ + G V +A ++ ML+AG +PN+
Sbjct: 568 GFLEEAEGIFIEMQ-KKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPT 626
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
SL+ + + + D + L + G+ P + LL+ T ++G E ++
Sbjct: 627 CNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLSCCTDAQTNDMGFCCELMQV 686
Query: 347 SNSKLGYVVKLLLEEQDIEG-------DFKKEATELFNSISKDVKKAYCNCLIDLCVNLN 399
+ G+ L G D + +L +S ++ K+ + ++D
Sbjct: 687 T----GHPAHTFLVSLPSAGPNGQNVRDHMSKFLDLMHSEDRESKRGLVDAVVDFLHKSG 742
Query: 400 LLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESG 458
L E A + E + VY D ++ +S W ++L +S G A+TAL + + L
Sbjct: 743 LKEEAGCVWEAAMQKNVYPDAVKEKSSCYWLINLHVMSDGTAVTALSRTLAWFRQQLLLS 802
Query: 459 EEFPPLLGINTGHGKH-KYSDKGLA-SVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
P + I TG G+ K + L + L + PF G F+ W
Sbjct: 803 GVGPSRIDIVTGWGRRSKVTGSSLVRQAVQDLLSIFSFPFFTENGNSGCFVGCGEPLSRW 862
Query: 517 LE 518
L
Sbjct: 863 LH 864
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + W D + L+ L+G +GN Y M G+KPN+ T N+LL R +
Sbjct: 581 QKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQL 640
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + M GL P+ TY LL
Sbjct: 641 SDAYQLLQSMLTFGLKPSLQTYTLLL 666
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F +K + D T+++MI + + + + ++M++ G +PN+ +I
Sbjct: 362 ALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRII 421
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+A D V ++ E G P DR C L
Sbjct: 422 HSYGRANYLQDAVNVFKQMQEAGCEP-DRVTYCTL 455
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
D + CQP+ T++ +I + +A +F +M EAG EP+ +LI + K+
Sbjct: 403 DQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKS 462
Query: 298 QRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
D + ++ + G+TPD ++N +
Sbjct: 463 GFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 184/422 (43%), Gaps = 15/422 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ +G D + +YE+M+ G+ P+ TY+ +++ +G+A ++
Sbjct: 448 DRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLF 507
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M D G PN TY ++ +AR E L +YR+M++ G + Y ++ +
Sbjct: 508 CRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHC 567
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ +EA IF +M+ +N PD + ++ + G V +A ++ ML+AG +PN+
Sbjct: 568 GFLEEAEGIFIEMQ-KKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPT 626
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
SL+ + + + D + L + G+ P + LL+ T ++G E ++
Sbjct: 627 CNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLSCCTDAQTNDMGFCCELMQV 686
Query: 347 SNSKLGYVVKLLLEEQDIEG-------DFKKEATELFNSISKDVKKAYCNCLIDLCVNLN 399
+ G+ L G D + +L +S ++ K+ + ++D
Sbjct: 687 T----GHPAHTFLVSLPSAGPNGQNVRDHMSKFLDLMHSEDRESKRGLVDAVVDFLHKSG 742
Query: 400 LLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESG 458
L E A + E + VY D ++ +S W ++L +S G A+TAL + + L
Sbjct: 743 LKEEAGCVWEAAMQKNVYPDAVKEKSSCYWLINLHVMSDGTAVTALSRTLAWFRQQLLLS 802
Query: 459 EEFPPLLGINTGHGKH-KYSDKGLA-SVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
P + I TG G+ K + L + L + PF G F+ W
Sbjct: 803 GVGPSRIDIVTGWGRRSKVTGSSLVRQAVQDLLSIFSFPFFTENGNSGCFVGCGEPLSRW 862
Query: 517 LE 518
L
Sbjct: 863 LH 864
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + W D + L+ L+G +GN Y M G+KPN+ T N+LL R +
Sbjct: 581 QKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQL 640
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + M GL P+ TY LL
Sbjct: 641 SDAYQLLQSMLTFGLKPSLQTYTLLL 666
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F +K + D T+++MI + + + + ++M++ G +PN+ +I
Sbjct: 362 ALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRII 421
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+A D V ++ E G P DR C L
Sbjct: 422 HSYGRANYLQDAVNVFKQMQEAGCEP-DRVTYCTL 455
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
D + CQP+ T++ +I + +A +F +M EAG EP+ +LI + K+
Sbjct: 403 DQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKS 462
Query: 298 QRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
D + ++ + G+TPD ++N +
Sbjct: 463 GFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 191/423 (45%), Gaps = 16/423 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D N ++TLI+++G G F +N++ ++ GV+P+M TY LL + G+ K I+
Sbjct: 319 DVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIH 378
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + ++P + + L+ AYG A + + MKE G + + YN L+ A
Sbjct: 379 RHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGG 438
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA + M E D T++S+I G +A +M EA PN
Sbjct: 439 GLYCEAGSAYLTM-IDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHT 497
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPK-EELGKLVECV 344
+L+ Y A D+ L G P D +C LL+V + + ++ K++E +
Sbjct: 498 YEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYC-LLLSVCARRNRWDDASKVLEEM 556
Query: 345 EKSN--SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA---YCNCLIDLCVNLN 399
+ N S G V +L E D +G + F+ + D + + N L++ L
Sbjct: 557 LEPNMPSIYGVVGGILKGEMD-DGTNWQRVEYAFDGLKVDGVGSNLRFYNALLEALWCLG 615
Query: 400 LLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGE 459
E AC++ V + SRS W++ + +S+GAA+T L +W+ D+ +++
Sbjct: 616 QRERACRVFAEARKRGVLAEAFSRSDLMWAIDVHRMSVGAAMTTLIVWLADMKAEIDNKS 675
Query: 460 EFPPLLGINTGHGKHKYSDKGLASVFESH-----LKELNAPFHDSPDKVGWFLTTEAAAK 514
FPPLL I T G K ++ L S+ + L + APF + G +T +
Sbjct: 676 TFPPLLSIVTKWGD-KDPNRDLKSLPAARAILGGLAAIGAPFDFAEWNEGRIITWAPVLQ 734
Query: 515 SWL 517
WL
Sbjct: 735 KWL 737
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 2/230 (0%)
Query: 90 LKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
++E R NE + D ++ L+ +YG A +G + EM+ G P+++ YN
Sbjct: 196 VEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNI 255
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L++ GRA + ++K+M + G +P+ T+++LL AYG+ ++ ++ +MKE+G
Sbjct: 256 LIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERG 315
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ V YNTL+ + G+ E+ +F D+ +PD T++ ++ C G A
Sbjct: 316 TEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDG-GVEPDMSTYAGLLYSCGKGGLHKAA 374
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + ML++ P T LI YG A + A N + E G PD
Sbjct: 375 KKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPD 424
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNN 148
E S AR ++ ++ PN ++T+I G ++G L ++ +M+ G++P++ITYN
Sbjct: 126 EASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNT 185
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
LL + +++ M + G+ P+ TY +L+ YG+A E + REM++ G
Sbjct: 186 LLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAG 245
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
V YN L+ G A ++F+ M+ + C PD TFS+++ G E
Sbjct: 246 NAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEA-GCTPDVVTFSTLLEAYGKHGCYDEV 304
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F +M E G EP++ +LIQ +G+ + + L + G+ PD
Sbjct: 305 RLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPD 354
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 7/247 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
+AS+L E D + +W + +F+ LI YG G + L++ MK V PN+IT
Sbjct: 92 KASELFE---DMPLNDVEWNV--YSFTALINAYGRNGQHEASLHLLARMKREKVTPNLIT 146
Query: 146 YNNLLDTMGRAKRPWQ-VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
YN +++ + W+ + ++ +M G+ P+ TY +LL A E+ V+R M
Sbjct: 147 YNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTM 206
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
E G+ YN L+ + + E+ +M+ + N PD ++ +I GK
Sbjct: 207 NEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNA-PDVVAYNILIEAYGRAGK 265
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
A MF +M EAG P++ ++L++ YGK D+V + E G PD
Sbjct: 266 YRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNT 325
Query: 325 LLNVMTQ 331
L+ V Q
Sbjct: 326 LIQVFGQ 332
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ N FS + + + ++ L +++ M + KPN Y ++ MGR +
Sbjct: 35 KLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKAS 94
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++++M N + N ++ +L+ AYGR E +L + MK + + ++ YNT++ C
Sbjct: 95 ELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINAC 154
Query: 224 ADVGYTDEA-FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
A G E +F M+ E QPD T++++++ CS RG V EA +F M EAG P
Sbjct: 155 AKGGLEWEGLLGLFAQMR-HEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVP 213
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +L+ YG+A R + V L + + G PD
Sbjct: 214 DSITYNALVDIYGQADRHEGVGELLREMEQAGNAPD 249
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+E + D ++TL+ + G + V+ M GV P+ ITYN L+D G+A R
Sbjct: 172 RHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRH 231
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
V + +EM G +P+ Y L+ AYGRA ++++M+E G V ++TL
Sbjct: 232 EGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTL 291
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L G DE +F DMK +PD T++++I + G E+ +F ++L+ G
Sbjct: 292 LEAYGKHGCYDEVRLLFTDMK-ERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGG 350
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP-DDRFCGCL 325
EP++ L+ GK + + + +TP D F G +
Sbjct: 351 VEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLI 397
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 59/120 (49%)
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
S+ + M+ +L++ ++ + A +A +F+ M+ + C+P+ ++ MI I
Sbjct: 24 SIAKTMEGYRNKLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGI 83
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + +A +F +M E N++ T+LI YG+ + + + L R+ +TP+
Sbjct: 84 MGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPN 143
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 187/422 (44%), Gaps = 16/422 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG D +++Y+ M+A G+ P+ TY+ +++ +G+A ++
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D G +PN TY ++ + +AR + L +YR+M+ G + Y+ ++ +
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY +EA +F +M+ +N PD + ++ + G V +A + ML AG PN+
Sbjct: 553 GYLEEAEAVFTEMQ-QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPT 611
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ-TPKEELGKLVECVE 345
SL+ + + + + L + LG+ P + LL+ T K ++G + +
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGYCGQLMA 671
Query: 346 KSNSKLGYVVKLLLEEQDIEG----DFKKEAT---ELFNSISKDVKKAYCNCLIDLCVNL 398
+ G+ + L + G + + A +L +S ++ K+ + ++D
Sbjct: 672 ST----GHPAHMFLLKMPAAGPNGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKS 727
Query: 399 NLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALES 457
E A + E+ V+ D ++ +S + W ++L +S G A+TAL + + +
Sbjct: 728 GQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRRQMLV 787
Query: 458 GEEFPPLLGINTGHGKHKY--SDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
P + I TG G+ + E L +PF G F+ +
Sbjct: 788 SGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGCGESLNK 847
Query: 516 WL 517
WL
Sbjct: 848 WL 849
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 151/329 (45%), Gaps = 11/329 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N RID + ++K GN G Y + G K + TY ++ +GRAK+
Sbjct: 323 QNLGLRIDAYQANQVLKQMNDYGNALGFF--YWLKRQPGFKHDGHTYTTMVGNLGRAKQF 380
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM +G PN TY L+ +YGRA Y + ++V+ +M+E G + Y TL
Sbjct: 381 GAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTL 440
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + A G+ D A ++++ M++ PD++T+S +I G + A +F EM++ G
Sbjct: 441 IDIHAKAGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELG 338
PNL ++ + KA+ ++ + G PD ++ V+ EE
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 339 KLVECVEKSN-----SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
+ +++ N G +V L + ++E ++ L + +V CN L+
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPT--CNSLLS 617
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQS 422
+ +N + A +LL+ L L + +Q+
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQT 646
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T + + W D + L+ L+G AGN + Y+ M G+ PN+ T N+LL T R
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRV 622
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + + + M GL P+ TY LL
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA--- 156
+N + D +S ++++ G G + V+ EM+ P+ Y L+D G+A
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
++ WQ Y+ M GL PN T SLL + R + + + M G++ S+ Y
Sbjct: 591 EKAWQ---WYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Query: 217 NTLLAMCAD 225
LL+ C D
Sbjct: 648 TLLLSCCTD 656
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 202/458 (44%), Gaps = 31/458 (6%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN 142
K A KL+EK R + +D ++TL+ +Y G +D V EEM+ +G++ +
Sbjct: 400 KYDEALKLREKMKSLRIQ-----LDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKD 454
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+TYN+L++ G+ R V + ++M G++P+ TY++L+ Y +A D +VY
Sbjct: 455 TVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYL 514
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+ KE G++ V L+++ + A G + A + ++M +P+ T++++I
Sbjct: 515 DFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKM-GIKPNVVTYNTIIDAFGKS 573
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA----------LNRLPE 312
+E ++ +M G V + G TD +R ++ +
Sbjct: 574 KIFTEEDSDIGDMGIVGVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQ 633
Query: 313 LGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK-SNSKLGYVVKLLLEEQDIEGDFKK 370
G+ P+ +LN ++ E+ L+E + NS G LL+ ++
Sbjct: 634 QGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNSVYGVAYGLLMGHREAW----S 689
Query: 371 EATELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQ 427
+A LFN + + A+ N L D+ + + A +++ G+ V+ +
Sbjct: 690 QARSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRQGAQQVVLEGVNRRVWENTWG----D 745
Query: 428 WSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK--YSDKGLASVF 485
+ L L +S GAA +H W+ ++ + G P L I TG GKH L V
Sbjct: 746 FCLDLHLMSCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWGKHSKVAGSSTLRRVI 805
Query: 486 ESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSSL 523
E+ L + APF +G F++ A +WL ++
Sbjct: 806 EALLLSIGAPFQAERFNIGRFVSPSALVSAWLRESGTI 843
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 102/244 (41%), Gaps = 37/244 (15%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY-KE 168
A S LI Y +G + V E MK G++P ++YN ++D G+ + Y ++
Sbjct: 246 AHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQ 305
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL---LAMCAD 225
M +GL P+ T+ SLL A RA + ED +V+ EM G + YNT + C +
Sbjct: 306 MLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGN 365
Query: 226 VGYT--------------------------------DEAFEIFEDMKSSENCQPDSWTFS 253
+G DEA ++ E MKS Q D ++
Sbjct: 366 MGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLR-IQLDRVCYN 424
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+++ I GK E + EM + G E + SLI YGK R D V + +
Sbjct: 425 TLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQ 484
Query: 314 GITP 317
G+ P
Sbjct: 485 GVAP 488
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 7/237 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ AG+ + V++EM +G ++ TYN +D + + +
Sbjct: 314 DRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVV 373
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M N PN TY++L+ + + ++ L + +MK +QL YNTLLA+
Sbjct: 374 LDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKT 433
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DE + E+M+ + D+ T++S+I +G++ + +M G P++
Sbjct: 434 GKYDEIATVCEEMEKL-GIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLT 492
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
++LI Y KA D E G+ D ++ + + LVEC
Sbjct: 493 YSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKN------GLVEC 543
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 112/241 (46%), Gaps = 9/241 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ I G G D ++ A + ++ L+ R+ + + + M
Sbjct: 212 LTAAIGALGKMGRPDLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMK 271
Query: 171 DNGLSPNWNTYASLLRAYGRARYGED---TLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
GL P +Y +++ A G+ G D TL +R+M + G+ +N+LLA C+ G
Sbjct: 272 GAGLRPTTVSYNAVIDACGKG--GVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAG 329
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+ ++A +F++M + + D +T+++ + IC C G + A + +M +PN+
Sbjct: 330 HLEDARTVFDEMIHLGSGR-DIYTYNTFVDAICKC-GNMGLALQVVLDMEANNAKPNVVT 387
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
++L+ + K ++ D+ ++ ++ L I D LL + +T K +E+ + E +E
Sbjct: 388 YSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEME 447
Query: 346 K 346
K
Sbjct: 448 K 448
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+ + R ++E + +++L++++G AG + L++ +EM+ P+++TYN L+
Sbjct: 300 RKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAA 359
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
RA + M G+ PN TY +++ AYG+A + LS +R+MKE G +
Sbjct: 360 YVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V YN +L M +E ++ DM+S+ C P+S T+++M+ +C +G +F
Sbjct: 420 VCTYNAILGMLGKKSRLEEMIDMLCDMRSN-GCAPNSVTWNTMLAMCGNKGMHKYVNRVF 478
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
EM GFEPN +LI YG+ DVV+ + + G TP LLN + +
Sbjct: 479 REMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALAR 537
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 2/218 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
E++ +D A++T++ Y G ++ + ++E+M+ G+ P ++TYN +LD G+ R W
Sbjct: 203 EEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWN 262
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + EM NGL + T ++++ A GR ++ + +K +G YN+LL
Sbjct: 263 KILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLL 322
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA I ++M+ + NC PD T++ ++ G E + M+ G
Sbjct: 323 QVFGKAGIYSEALSILKEMEKN-NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGI 381
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN T++I YGKA + D + ++ E G P+
Sbjct: 382 MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PNA ++T+I YG AG D L+ + +MK G PN+ TYN +L +G+ R ++
Sbjct: 381 IMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMI 440
Query: 164 TIYKEMTDNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +M NG +PN WNT ++ G +Y V+REMK G + + +N L+
Sbjct: 441 DMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKY---VNRVFREMKSCGFEPNRDTFNALI 497
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G + +++E+M + P T+++++ + RG AE++ +M GF
Sbjct: 498 GAYGRCGSQIDVVKMYEEMIKA-GFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGF 556
Query: 281 EPNLFVLTSLIQCYGKA 297
+PN + ++ CY K
Sbjct: 557 KPNETSYSLMLNCYAKG 573
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 40/249 (16%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ ++ + G + +++ +M++ G PN +T+N +L G V +
Sbjct: 418 PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRV 477
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G PN +T+ +L+ AYGR D + +Y EM + G VT YN LL A
Sbjct: 478 FREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALAR 537
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-------KVSE----------- 267
G + A + DMK S+ +P+ ++S M+ C +G K+ E
Sbjct: 538 RGDWEAAESVILDMK-SKGFKPNETSYSLMLN-CYAKGGNGRGIEKIEEEIYNGHIFPSW 595
Query: 268 ------------------AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
E F E + G++P+L + S++ + K + D L
Sbjct: 596 ILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRL 655
Query: 310 LPELGITPD 318
+ E G+ PD
Sbjct: 656 IRESGLQPD 664
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 39/285 (13%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEKSYDTRARNEK-WRIDPN--AFSTLIKLYGTAGNFDGC 127
G +P S W + +K K + R K +PN F+ LI YG G+
Sbjct: 450 GCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDV 509
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ +YEEM G P + TYN LL+ + R +++ +M G PN +Y+ +L
Sbjct: 510 VKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNC 569
Query: 188 YGRARYGEDTLSV-----------------------------------YREMKEKGMQLS 212
Y + G + ++E + G +
Sbjct: 570 YAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPD 629
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ L+N++L++ A D A E+ ++ S QPD T++S++ + + G+ + E +
Sbjct: 630 LVLFNSMLSIFAKNKMYDRAHEMLRLIRES-GLQPDLVTYNSLMDMYARGGECWKGEEIL 688
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ ++G +P+L ++I+ + + + +R L+ + GI P
Sbjct: 689 KGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRP 733
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D F++++ ++ +D + ++ G++P+++TYN+L+D R W+ +
Sbjct: 626 YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGE 685
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I K + +G P+ +Y ++++ + R ++ + EM G++ + YNT +A
Sbjct: 686 EILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGY 745
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ G E E+ M +C+P+ T+ ++ C+GK
Sbjct: 746 SGKGMFSEVEEVISYM-IQHDCRPNELTY-KIVVDGYCKGK 784
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 90/195 (46%), Gaps = 1/195 (0%)
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
G ++E G KP+++ +N++L + K + + + + ++GL P+ TY SL+
Sbjct: 613 GMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLM 672
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y R + + +++ G + + YNT++ G EA +M S
Sbjct: 673 DMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTIS-GI 731
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+P T+++ + S +G SE E + + M++ PN ++ Y K ++ + +
Sbjct: 732 RPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791
Query: 306 ALNRLPELGITPDDR 320
++ + E+ + DD+
Sbjct: 792 FVSNITEMDKSFDDQ 806
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+++ ++ + ++S ++ Y GN G + EE+ + P+ I L+ + +
Sbjct: 552 KSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRAL 611
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ ++E +G P+ + S+L + + + + + R ++E G+Q + YN+L
Sbjct: 612 MGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSL 671
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ M A G + EI + ++ S +PD +++++I +G + EA +EM +G
Sbjct: 672 MDMYARGGECWKGEEILKGIQKS-GGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISG 730
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P + + + Y +V ++ + + P++
Sbjct: 731 IRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNE 770
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+ + R ++E + +++L++++G AG + L++ +EM+ P+++TYN L+
Sbjct: 300 RKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAA 359
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
RA + M G+ PN TY +++ AYG+A + LS +R+MKE G +
Sbjct: 360 YVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V YN +L M +E ++ DM+S+ C P+S T+++M+ +C +G +F
Sbjct: 420 VCTYNAILGMLGKKSRLEEMIDMLCDMRSN-GCAPNSVTWNTMLAMCGNKGMHKYVNRVF 478
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
EM GFEPN +LI YG+ DVV+ + + G TP LLN + +
Sbjct: 479 REMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALAR 537
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 2/218 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
E++ +D A++T++ Y G ++ + ++E+M+ G+ P ++TYN +LD G+ R W
Sbjct: 203 EEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWN 262
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + EM NGL + T ++++ A GR ++ + +K +G YN+LL
Sbjct: 263 KILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLL 322
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA I ++M+ + NC PD T++ ++ G E + M+ G
Sbjct: 323 QVFGKAGIYSEALSILKEMEKN-NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGI 381
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN T++I YGKA + D + ++ E G P+
Sbjct: 382 MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PNA ++T+I YG AG D L+ + +MK G PN+ TYN +L +G+ R ++
Sbjct: 381 IMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMI 440
Query: 164 TIYKEMTDNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +M NG +PN WNT ++ G +Y V+REMK G + + +N L+
Sbjct: 441 DMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKY---VNRVFREMKSCGFEPNRDTFNALI 497
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G + +++E+M + P T+++++ + RG AE++ +M GF
Sbjct: 498 GAYGRCGSQIDVVKMYEEMIKA-GFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGF 556
Query: 281 EPNLFVLTSLIQCYGKA 297
+PN + ++ CY K
Sbjct: 557 KPNETSYSLMLNCYAKG 573
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 40/249 (16%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ ++ + G + +++ +M++ G PN +T+N +L G V +
Sbjct: 418 PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRV 477
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G PN +T+ +L+ AYGR D + +Y EM + G VT YN LL A
Sbjct: 478 FREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALAR 537
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-------KVSE----------- 267
G + A + DMK S+ +P+ ++S M+ C +G K+ E
Sbjct: 538 RGDWEAAESVILDMK-SKGFKPNETSYSLMLN-CYAKGGNGRGIEKIEEEIYNGHIFPSW 595
Query: 268 ------------------AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
E F E + G++P+L + S++ + K + D L
Sbjct: 596 ILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRL 655
Query: 310 LPELGITPD 318
+ E G+ PD
Sbjct: 656 IRESGLQPD 664
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 39/285 (13%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEKSYDTRARNEK-WRIDPN--AFSTLIKLYGTAGNFDGC 127
G +P S W + +K K + R K +PN F+ LI YG G+
Sbjct: 450 GCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDV 509
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ +YEEM G P + TYN LL+ + R +++ +M G PN +Y+ +L
Sbjct: 510 VKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNC 569
Query: 188 YGRARYGEDTLSV-----------------------------------YREMKEKGMQLS 212
Y + G + ++E + G +
Sbjct: 570 YAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPD 629
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ L+N++L++ A D A E+ ++ S QPD T++S++ + + G+ + E +
Sbjct: 630 LVLFNSMLSIFAKNKMYDRAHEMLRLIRES-GLQPDLVTYNSLMDMYARGGECWKGEEIL 688
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ ++G +P+L ++I+ + + + +R L+ + GI P
Sbjct: 689 KGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRP 733
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D F++++ ++ +D + ++ G++P+++TYN+L+D R W+ +
Sbjct: 626 YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGE 685
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I K + +G P+ +Y ++++ + R ++ + EM G++ + YNT +A
Sbjct: 686 EILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGY 745
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ G E E+ M +C+P+ T+ ++ C+GK
Sbjct: 746 SGKGMFSEVEEVISYM-IQHDCRPNELTY-KIVVDGYCKGK 784
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 90/195 (46%), Gaps = 1/195 (0%)
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
G ++E G KP+++ +N++L + K + + + + ++GL P+ TY SL+
Sbjct: 613 GMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLM 672
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y R + + +++ G + + YNT++ G EA +M S
Sbjct: 673 DMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTIS-GI 731
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+P T+++ + S +G SE E + + M++ PN ++ Y K ++ + +
Sbjct: 732 RPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMD 791
Query: 306 ALNRLPELGITPDDR 320
++ + E+ + DD+
Sbjct: 792 FVSNITEMDKSFDDQ 806
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+++ ++ + ++S ++ Y GN G + EE+ + P+ I L+ + +
Sbjct: 552 KSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRAL 611
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ ++E +G P+ + S+L + + + + + R ++E G+Q + YN+L
Sbjct: 612 MGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSL 671
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ M A G + EI + ++ S +PD +++++I +G + EA +EM +G
Sbjct: 672 MDMYARGGECWKGEEILKGIQKS-GGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISG 730
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P + + + Y +V ++ + + P++
Sbjct: 731 IRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNE 770
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 204/467 (43%), Gaps = 63/467 (13%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +STLI Y ++ L + E+MK++ ++ + + YN LL +A + ++
Sbjct: 118 VKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIA 177
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM + G+ + TY SL+ YG+ + + ++M+++G+ SV Y+TL+ +
Sbjct: 178 NVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIY 237
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +AF ++ D K S +PD FSS I + G + A ++ N+M E G +PN
Sbjct: 238 SKAGMHGDAFNVYLDFKES-GLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPN 296
Query: 284 LFVLTSLIQCYGKAQ--RTDD---------------VVRALN------------------ 308
+ ++I +GK++ DD +VR N
Sbjct: 297 VVTYNAIIDAFGKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQ 356
Query: 309 ----------RLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK-SNSKLGYVVK 356
++ + G+ P+ +LN ++ E+ L+E + N G
Sbjct: 357 ELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNFVYGVAYG 416
Query: 357 LLLEEQDIEGDFKKEATELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLT 413
LL+ +++ +A LFN + + A+ N L D+ + A +++ G+
Sbjct: 417 LLVGSREVW----SQAQSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRRKAQQVVFEGIN 472
Query: 414 LEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGK 473
V+ + + ++ L L +S GAA +H W+ ++ + G P L I TG GK
Sbjct: 473 RRVWEN----TWGEFCLDLHLMSCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWGK 528
Query: 474 HKY--SDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
H L V E+ L + APF +G F++ A +WL
Sbjct: 529 HSRIAGASTLRRVIEALLNSIGAPFQVERFNIGRFVSPSAVVAAWLR 575
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ G+ + V++EM +G+ ++ TYN +D + + +
Sbjct: 51 DRKTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVL 110
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M G+ PN TY++L+ Y + E+ L + +MK +QL YNTLLA+
Sbjct: 111 LDMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKA 170
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E + ++M+ + D+ T++S+I +G++ + +M + G P++
Sbjct: 171 GKYAEIANVCDEMEEL-GIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLT 229
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++LI Y KA D E G+ PD
Sbjct: 230 YSTLIDIYSKAGMHGDAFNVYLDFKESGLKPD 261
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY-KEMTDNGLSPNWNTYASLLR 186
+ V E MK G++P ++YN ++D G+ + Y ++M +GL P+ T+ SLL
Sbjct: 1 MGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLA 60
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA------------DV------- 226
A R + ED +V+ EM G+ + YNT + A+C D+
Sbjct: 61 ACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKP 120
Query: 227 ----------GYT-----DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
GY+ +EA ++ E MKS Q D +++++ I GK +E +
Sbjct: 121 NVVTYSTLIDGYSKLEKYEEALKLCEKMKSMR-IQLDRVCYNTLLAIYVKAGKYAEIANV 179
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+EM E G E + SLI YGK R D V + + + G+ P
Sbjct: 180 CDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAP 225
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGED---TLSVYREMKEKGMQLSVTLYNTLLA 221
+ + M GL P +Y +++ A G+ G D TL +R+M + G+ +N+LLA
Sbjct: 3 VLESMKGAGLRPTTVSYNAVIDACGKG--GVDLRFTLGYFRQMLKDGLCPDRKTFNSLLA 60
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGF 280
C+ VG+ ++A +F++M D +T+++ I IC C G + A + +M G
Sbjct: 61 ACSRVGHLEDARAVFDEMIHL-GIGRDIYTYNTFIDAICKC-GNMELAMQVLLDMEAKGV 118
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
+PN+ ++LI Y K ++ ++ ++ ++ + I DR C
Sbjct: 119 KPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQL-DRVC 159
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 183/419 (43%), Gaps = 10/419 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D + L+ +Y AGNFD VY + G++P+ TYN L+ R+ RP +
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T+ EM GL+P +Y SLL A +A E ++ EM+ K QL+ ++Y+ ++ +
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +A + MK + +P T ++T G+ EAE + N + + E +
Sbjct: 1036 RNAGNHSKAENLLAVMK-EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS 1094
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+++ Y K + L + G+ PD + C + + + L
Sbjct: 1095 TLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAIL--- 1151
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATEL--FNSISKDVKKAYCNCLIDLCVNLNLL 401
+ KS G+ + + L + + A L ++ + N + DL
Sbjct: 1152 LLKSLQDCGFDLPIRLLTERTPSLLSEIANYLEELEALEDSAALNFVNAVEDLLWAFECR 1211
Query: 402 ENACKLLELGLTLEVYTDIQSR-SPTQWSLHLKSLSLGAALTALHIWINDLSKA-LESGE 459
A ++ +L + +Y D R + W + LS GAAL L +W++ + A L+
Sbjct: 1212 ATASRIFQLAVERSIYRDNVFRVAQKDWGADFRKLSAGAALVGLTLWLDHMQDASLQGSP 1271
Query: 460 EFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
E P + + TG G +Y+ L ++L E+ +PF + G F+ + + K WL+
Sbjct: 1272 ESPKSVVLVTGEG--EYNMVSLRKTIRAYLLEMGSPFLPCRARSGRFVVKDYSLKMWLK 1328
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 117/238 (49%), Gaps = 1/238 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R R D ++TLI + N + + V+E+M A +P++ TYN ++ GR +
Sbjct: 284 VRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGK 343
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + +++E+ + G P+ TY SLL A+ + + ++ + G + + YNT
Sbjct: 344 AEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNT 403
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M +G D A ++++M++ C PD+ T++ MI +++EA + +M +A
Sbjct: 404 MIHMYGKMGRLDLAVGLYDEMRAM-GCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDA 462
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
G +P L ++LI Y K R D + + G+ PD +L+V ++ E
Sbjct: 463 GLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTE 520
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 117/235 (49%), Gaps = 6/235 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I +YG G D + +Y+EM+A+G P+ +TY ++D++G+ R + + ++MT
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT 460
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D GL P +++L+ AY + D + + M G++ Y +L + A G T+
Sbjct: 461 DAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTE 520
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ ++ M ++N +PD + ++ + K E E + +M E NL +++++
Sbjct: 521 KMLCLYRKMM-NDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDM-ELLCRMNLGIISTM 578
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLVECV 344
+ KA+ + L + G PD + ++N T K E G L+EC+
Sbjct: 579 LI---KARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECI 630
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R P+ + +++ G + ++ L+ +E + A P +L +GRA++ +
Sbjct: 152 RASPDEVAFVVRAVGES-SWRRALDAFEWL-ARSSAPASRAVAVVLGVLGRARQDSIAEE 209
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGR------ARYGEDT--------------------- 197
++ G + + +++ Y R AR DT
Sbjct: 210 VFLRFAGEGATVQ--VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARS 267
Query: 198 ----------LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
L + E+++ G++ V YNTL++ C+ ++A +FEDM +SE C+P
Sbjct: 268 KSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASE-CRP 326
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D WT+++M+++ GK EAE +F E++E GF P+ SL+ + K D V
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTC 386
Query: 308 NRLPELGITPDD 319
+L + G ++
Sbjct: 387 EQLVKAGFKKNE 398
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+N L+ + + + ++ M G P ++ ++RA ++ V E++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+ ++S + LL A G E +I+ MK++ P+ + SMI++ +
Sbjct: 843 DMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAA-GYLPNMHLYRSMISLLCHHNRF 901
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+ E M EM AGF+P+L +L +L+ Y A D + + E G+ PD+ L
Sbjct: 902 RDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTL 961
Query: 326 LNVMTQT--PKE------ELGK--LVECVEKSNSKLGYVVKLLLEEQ--DIEGDFKKEAT 373
+ + ++ P+E E+GK L ++ S L K L EQ I + + ++
Sbjct: 962 IVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSY 1021
Query: 374 ELFNSISKDVKKAYCN 389
+L SI + K Y N
Sbjct: 1022 QLNRSIYHMMMKIYRN 1037
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G D V EE++ + K + T LLD +A ++V IY M G PN + Y
Sbjct: 829 GRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 888
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
S++ D + EM+ G + + + N LL M G D +++ +
Sbjct: 889 RSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILE 948
Query: 242 SENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+ +PD T++++I + CR + E + NEM + G P L SL+ KA+
Sbjct: 949 A-GLEPDEDTYNTLI-VMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAE 1004
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 68 GKTGSSPK--SYIWVNPKSPRASKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGN 123
GK G +PK SY + S +A +L+E++ R++ ++++ + + ++K+Y AGN
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKA-ELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGN 1040
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
N+ MK G++P + T + L+ + G A +P + + + + + L + Y++
Sbjct: 1041 HSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYST 1100
Query: 184 LLRAYGR-ARYGEDTLSVYREMKEKGMQ 210
+ AY + Y T + EMK G++
Sbjct: 1101 VFDAYLKNGDYNHGTTKLL-EMKRDGVE 1127
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 123/227 (54%), Gaps = 3/227 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TL+ +YG G ++ ++V + MK GV+P + TYN L+ +P + +
Sbjct: 212 PNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAV 271
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y+ + +G +PN TY +L+ AYG+ L VY+EM + M SV Y++L++ C
Sbjct: 272 YQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEK 331
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A IF +M+ + C P++ T++S++T C+ G+ +A +F +M G P++
Sbjct: 332 AGQWETALRIFNEMQ-QDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVV 390
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
T+LI Y + + ++A +++ G PD +++ + +T
Sbjct: 391 TYTALISAYERGGQWQKALQAFHKMCVQGCKPDAIVYNAIIDTLWET 437
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 166/381 (43%), Gaps = 19/381 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ I L + D L + +EM++ ++ N+ TY L++ + + IY
Sbjct: 143 DVYSYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIY 202
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M PN TY +L+ YG+ E + V MK +G++ + YNTL+ C
Sbjct: 203 NSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEGVEPVLRTYNTLIIACNMC 262
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +++ + S+ P+S T++++I+ ++ +A ++ EML + ++
Sbjct: 263 NQPREALAVYQRLL-SDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVIT 321
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+SLI KA + + +R N + + P+ L+ Q + E K E E+
Sbjct: 322 YSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWE--KAAEVFEQ 379
Query: 347 SNSK------LGYVVKLLLEEQDIEGDFKKEATELFNSISKDVK--KAYCNCLIDLCVNL 398
N+ + Y L+ + G ++K + K N +ID
Sbjct: 380 MNAHGCTPDVVTYTA--LISAYERGGQWQKALQAFHKMCVQGCKPDAIVYNAIIDTLWET 437
Query: 399 NLLENACKLLELGLTL----EVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK- 453
++ K L+L +T + + R P + ++L +++ G A+ L+ W+ +L +
Sbjct: 438 GIIWAQGKALQLFMTAVQQGHFHQEPLVRRPGRVEVNLHAMTAGVAMVCLYCWLLELRRI 497
Query: 454 ALESG-EEFPPLLGINTGHGK 473
A+E G + P L I T GK
Sbjct: 498 AIEKGPQHLPAALAIVTDMGK 518
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 175/372 (47%), Gaps = 9/372 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG + +++Y M+ +G+ P+ TY+ +++ +G+ + ++
Sbjct: 433 DRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLF 492
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +NG +PN TY ++ +AR ++ + +YR+M+ G + Y+ ++ +
Sbjct: 493 CEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHC 552
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ DEA +F +M+ + PD + ++ + G V +A ++ ML+ G +PN+
Sbjct: 553 GHLDEAEAVFIEMR--RDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPT 610
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
SL+ + K R D L + G+ P + LL+ T ++G + +
Sbjct: 611 CNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSCCTDA-HAQMGLCCQLMAI 669
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEATELF----NSISKDVKKAYCNCLIDLCVNLNLLE 402
+ ++ L L + + G+ ++ T F +S ++ K+ + +ID L E
Sbjct: 670 TGHP-AHMFLLYLPDAEPGGENVRDHTRYFLDMMHSEDRESKRGLMDAVIDFLHKSGLKE 728
Query: 403 NACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEF 461
A + E+ VY D ++ +S W ++L +S G A+TAL + + +
Sbjct: 729 EAGFIWEVAAQKNVYPDSVREKSSAYWLINLHLMSEGTAVTALSRTLAWFHRQILVMGSC 788
Query: 462 PPLLGINTGHGK 473
P + I TG G+
Sbjct: 789 PERIDIVTGWGR 800
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G + +TY +++ G+AR ++ EM + +V YN ++ Y EA
Sbjct: 359 GFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREA 418
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
++FE+M+ + +PD T+ ++I I + G + A ++ M E G P+ F ++++
Sbjct: 419 VKVFEEMEEA-GYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVN 477
Query: 293 CYGKAQRTDDVVRALNRLPELGITPD 318
C GK + + + E G TP+
Sbjct: 478 CLGKGGQLAAAYKLFCEMIENGCTPN 503
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W D + L+ L+G AGN D L Y M G++PN+ T N+LL + R
Sbjct: 569 WAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAY 628
Query: 164 TIYKEMTDNGLSPNWNTYASLL 185
++ + M GL P+ TY LL
Sbjct: 629 SVLQNMLAQGLVPSLQTYTLLL 650
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++ G + Y T++ + + +M + + C+P T++ +I
Sbjct: 356 RQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEM-NRDRCKPTVVTYNRIIHAYGRANY 414
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ EA +F EM EAG+EP+ +LI + KA + + R+ E+G++PD
Sbjct: 415 LREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSA 474
Query: 325 LLNVM 329
++N +
Sbjct: 475 MVNCL 479
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 186/426 (43%), Gaps = 26/426 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI L AG D +++Y +M+ G +P+ TY+ ++ +G+A + ++
Sbjct: 136 DRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLF 195
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EMTD G +P+ TY ++ + +A + L +Y +++E G Y ++ + +
Sbjct: 196 CEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNC 255
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ ++A ++FE+M+ + D+ F M+ + G +A FN ML++G +PN+
Sbjct: 256 GHIEDAEQVFEEMERA-GWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPA 314
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVECVE 345
SL+ Y ++ D L + + G+ P + L + E L +
Sbjct: 315 CNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMG 374
Query: 346 KSNSKLG-YVVKLLLEEQDIEGD---FKKEATELFNSISKDVKKAYCNCLIDLCVNLNLL 401
+ +V LL + + G F E S ++ + + LID L
Sbjct: 375 GTGHPAHPFVCSLLASGEMVVGIRCFFDAMQFEELES-----RRGFADSLID------FL 423
Query: 402 ENACKLLELGLTLEVYTD-------IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
A K + G EV + ++ ++P WS++L +S G AL AL + ++A
Sbjct: 424 HRAGKAVAAGSVWEVAAEKNLYPNAVREKAPQYWSINLHVMSTGTALVALARTLAMFAEA 483
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKG--LASVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
+ P + I TG G+ + E L+ LN+PFH VG F+ A
Sbjct: 484 VVRTGAAPYRIDIITGWGRRSRVPGASLVKQAVEGMLRSLNSPFHLDGLNVGCFVGQGPA 543
Query: 513 AKSWLE 518
WL+
Sbjct: 544 LAEWLK 549
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 3/228 (1%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN ++ LI YG A + D L ++ M+ +G +P+ +TY L+D +A
Sbjct: 99 EPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMD 158
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y++M G P+ TY+ ++ G+A ++ EM ++G S+ YN ++ + A
Sbjct: 159 LYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHA 218
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D A +++ D++ PD T+ ++ + G + +AE +F EM AG+ +
Sbjct: 219 KAGKFDMALKLYSDLQEV-GYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADN 277
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ ++ +GK + + NR+ + G+ P+ C LL+ ++
Sbjct: 278 PIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRS 325
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G K ++ TY +L +GRAK + + EM G PN TY L+ YGRA
Sbjct: 59 KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ +L ++ M+ G + Y TL+ + A G+ D A +++ M+ + +PD++T+S
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHA-GFRPDTFTYSI 177
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I GK++ A +F EM + G+ P+L +I + KA + D ++ + L E+G
Sbjct: 178 IIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVG 237
Query: 315 ITPDDRFCGCLLNVM 329
PD G ++ V+
Sbjct: 238 YAPDRVTYGIIMEVL 252
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A+ F + + D T+++++ I + +EM+ G EPN+ LI
Sbjct: 50 AYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLI 109
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
CYG+A D ++ N + +G PD
Sbjct: 110 HCYGRANDLDSSLKLFNVMQMVGCEPD 136
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 188/418 (44%), Gaps = 11/418 (2%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + ++ +I LY G++ V++ M+ IG P+ T+N L+ R + + + +
Sbjct: 808 LDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQAL 867
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM G +PN +TY +L+ AYGR + ED V++ + E G + T YN ++ +
Sbjct: 868 LREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRK 927
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + E+ E MK ++ +P T ++ G +AE + + E G P+
Sbjct: 928 AGEHRKIEEVIEQMK-ADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAI 986
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
TS+I + + V L ++ + + P C + + + + +
Sbjct: 987 HYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGAASVCERSSHALM---LL 1043
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA---YCNCLIDLCVNLNLLE 402
K+ S+ G+ + L L + ++ ++F+ + + +A N L+DL
Sbjct: 1044 KALSEAGFSLPLRL-MTECTPKVVQDMQDIFDQLQESGPEACQGVVNVLMDLLWAFRQCA 1102
Query: 403 NACKLLELGLTLEVYTDIQSRSPTQ-WSLHLKSLSLGAALTALHIWINDLSKALESGEEF 461
A + + + +YT + +R + W + LS GAAL AL +W++ + A G
Sbjct: 1103 TAALVFAVAIESNIYTQVLARVKDRNWGADFRRLSPGAALVALILWLDQMQDASLQGSPV 1162
Query: 462 PPLLGINTGHGKHKYSDKG-LASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
PP I G K +++ +++ ++HL ++ +PF S + G + A WL+
Sbjct: 1163 PP-KSIQIDIGSSKLNNQASVSNTIKTHLWQMGSPFLPSKTRAGVLVAKSHALCMWLK 1219
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 36/274 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+ +A+S L+ Y GNF+ + M A G++PN N +L+ GRA + ++ Y
Sbjct: 669 NTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFY 728
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + + G++PN T+ + A+ R E+ S+YR+M+E G S+ ++ LLA+ +
Sbjct: 729 QRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRE 788
Query: 227 GYTDEAFEIFEDMKSSE----------------------------------NCQPDSWTF 252
+A E+ +D+K + C PD+ TF
Sbjct: 789 TVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTF 848
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+++I + S V EA+A+ EM++ G PN+ T+LI YG+ Q +D + E
Sbjct: 849 NTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAE 908
Query: 313 LGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
G PD ++NV + + K+ E +E+
Sbjct: 909 TGCKPDATAYNVMINVYRKAGEHR--KIEEVIEQ 940
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TLI + ++EEM+ G P++ TYN ++ GRA R +
Sbjct: 182 RPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASS 241
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I++ M + G +P+ TY S+L A+ R E+ + M++ YNT++ M
Sbjct: 242 IFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYG 301
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +A E++ MK C PDS TF+ +I G V+EA AMF +ML++ P L
Sbjct: 302 KAGMHRKAEELYVQMKEEGRC-PDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTL 360
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+++I Y KA D + + G+ PD +L+V
Sbjct: 361 QAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDV 404
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 107 DPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ ++ +I +YG AG + +++ M+ G P+ +TYN++L R R +V+
Sbjct: 217 DPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVER 276
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I M D S + TY +++ YG+A +Y +MKE+G + L+
Sbjct: 277 IRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLG 336
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G+ +EA +FEDM S+ +P FS+MI + S+AE ++ ML AG P+L
Sbjct: 337 KAGFVNEAAAMFEDMLKSQ-VRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDL 395
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ ++ + KA+ + + + G+ P+ ++ V Q
Sbjct: 396 LAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQ 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL-SVYRE 203
YN+L+ R V+ + M D G P+ T+ +++A R E S+ ++
Sbjct: 116 VYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQD 175
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+ G++ YNTL++ C+ +A IFE+M+ + C PD WT+++MI++ G
Sbjct: 176 VYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQ-RQGCDPDIWTYNAMISVYGRAG 234
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+V A ++F M E GF P+ S++ + + R ++V R
Sbjct: 235 RVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVER 276
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D ++T+I +YG AG +Y +MK G P+ +T+ L+DT+G+A
Sbjct: 282 RDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFV 341
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++++M + + P +++++ AY +A D Y M G++ + Y+ +
Sbjct: 342 NEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVM 401
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L + ++ +++ M S +P+ ++ M+ + + ++E E + EM++
Sbjct: 402 LDVFFKAEMPEKCIILYKAMVGS-GLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQ 458
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 24/239 (10%)
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYG-------EDTLSVYREMKEKGMQLSVTLYNT 218
+ +MT GL + + + Y R + D L + E+K+ M +++
Sbjct: 588 FLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAF-EVKDSAMHVAI----- 641
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+A + A +F D++ ++ +S++++ + G A + M+ A
Sbjct: 642 -IASYGKLKLWQNAEIVFRDLQR-HGFAGNTSAYSALLSAYAETGNFERATRALDNMVAA 699
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN +++ +G+A + ++ RLPE+GITP+ R + + ++ E
Sbjct: 700 GLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEA 759
Query: 339 KLV--ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATEL-FNSISKDVKKAYCNCLIDL 394
+ + + E S V K LL + +E E+ + KD+KKA +D+
Sbjct: 760 RSMYRQMREAGFSPSIQVFKALL------ALYSRETVEIDAEELVKDIKKAGLELDMDI 812
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 182/411 (44%), Gaps = 74/411 (18%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI +YG +G ++ L V E+MK ++P T+N L+ + + + +Y++M
Sbjct: 364 YNTLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMA 423
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ PN TY +L+ A+ + L+V++EM +KG + SV Y++L++ C G
Sbjct: 424 ASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWK 483
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A ++FE+M+ E C P+ +++S+IT C+ + +A +F +M G P++ T+L
Sbjct: 484 LALQLFEEMR-GEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTAL 542
Query: 291 IQCYGKAQRTDDVVRALNRLPEL----GITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
IQ Y +R RAL E+ PD +++V+ +T
Sbjct: 543 IQAY---ERGGQWRRALAAFEEMIRARPCAPDSIVYNTIIDVLWET-------------- 585
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
+G+ +++A LF ++A LI C
Sbjct: 586 ---GVGWA--------------QRKAASLF-------RQASAEGLIR-----------CH 610
Query: 407 LLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKAL--ESGEEFPPL 464
G +LE L+L S + G AL +LH W++DL L E E P
Sbjct: 611 SHAAGGSLE--------------LNLHSTTPGVALLSLHCWLHDLLAKLQAEGPEALPDK 656
Query: 465 LGINTGHGKHKYSDKGLA-SVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
+ I G GK K + + + L+ L +PF ++PD EAA K
Sbjct: 657 ICIIAGKGKSKDAPHSIIKETVGALLRSLRSPFEEAPDSTPHVGRLEAAGK 707
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AG + L++ +EM+ P+ +TYN L+ RA + + MT
Sbjct: 318 YNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMT 377
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+NG+ PN TY +++ AYGRA + LS+Y +MKE G +V YN +L M ++
Sbjct: 378 ENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSE 437
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E +I DMK + C P+ T+++M+++C +G + +F EM GFEP+ +L
Sbjct: 438 EMMKILCDMK-VDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTL 496
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I G+ D + + + E G TP LLN + +
Sbjct: 497 ITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALAR 537
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 123/242 (50%), Gaps = 3/242 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
+ + +D A++T++ Y G ++ + ++E+M G+ P ++TYN +LD G+ R W
Sbjct: 203 DDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWN 262
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + EM GL + T ++++ A GR ++ + +K +G YN LL
Sbjct: 263 KILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALL 322
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA I ++M+ + NC PD+ T++ ++ G E A+ + M E G
Sbjct: 323 QVFGKAGIYSEALSIMKEMEDN-NCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGI 381
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEELGK 339
+PN T++I YG+A + D + +++ E G P+ +L ++ ++ EE+ K
Sbjct: 382 KPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMK 441
Query: 340 LV 341
++
Sbjct: 442 IL 443
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 107/195 (54%), Gaps = 3/195 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ Y AG ++ + + M G+KPN +TY +++ GRA + + ++Y
Sbjct: 349 DAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLY 408
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M ++G +PN TY ++L G+ E+ + + +MK G + +NT+L+MC +
Sbjct: 409 DQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNK 468
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +F++MKS +PD TF+++IT G +AE +++EMLEAGF P++
Sbjct: 469 GMHKYVKRVFQEMKSC-GFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVAT 527
Query: 287 LTSLIQCYGKAQRTD 301
+L+ A+R D
Sbjct: 528 YNALLNAL--ARRGD 540
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T++ + G G V++EMK+ G +P+ T+N L+ GR + I
Sbjct: 453 PNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKI 512
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM + G +P+ TY +LL A R SV ++MK KG + S T Y+ +L A
Sbjct: 513 YDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAK 572
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS--CRGKVSEAEAMFNEMLEAGFEPN 283
GY I +D+ + P SW + + + CR ++ E F + + G++P+
Sbjct: 573 GGYVKGINRIEKDIYDG-HIFP-SWMLLRTLILANFKCRA-LAGMERAFQALQKHGYKPD 629
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L V S++ + + D ++ + E G+ PD
Sbjct: 630 LVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPD 664
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+TLI G G+ +Y+EM G P++ TYN LL+ + R +++
Sbjct: 489 DRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVI 548
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM---C 223
K+M + G P+ +Y+ +L +Y + Y + + +++ + + S L TL+ C
Sbjct: 549 KDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKC 608
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ + AF+ + +PD F+SM+++ S + A + + + E G +P+
Sbjct: 609 RALAGMERAFQALQ----KHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPD 664
Query: 284 LFVLTSLIQCY---GKAQRTDDVVRAL 307
L SL+ Y G+ + ++++R L
Sbjct: 665 LVTYNSLMDLYARGGECWKAEEILREL 691
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
++ I N K RA E+++ ++ ++ D F++++ ++ D + +
Sbjct: 599 RTLILANFKC-RALAGMERAFQALQKH-GYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLI 656
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+ G++P+++TYN+L+D R W+ + I +E+ ++G + +Y ++++ + R
Sbjct: 657 QECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLM 716
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ L EM +G++ + YNT + A G E E+ M + +C+P+ T+
Sbjct: 717 HEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYM-TKHDCRPNELTYKI 775
Query: 255 MI 256
++
Sbjct: 776 VV 777
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
G ++ ++ G KP+++ +N++L R + I + + GL P+ TY SL+
Sbjct: 613 GMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLM 672
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y R + RE++ G + + YNT++ G EA +M S
Sbjct: 673 DLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM-ISRGI 731
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+P T+++ + + +G +E + + + M + PN ++ Y KA++ + +
Sbjct: 732 RPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMD 791
Query: 306 ALNRLPELGITPDDRF 321
++ + ++ DD F
Sbjct: 792 FVSTITDI----DDSF 803
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/213 (17%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N+ ++ ++S ++ Y G G + +++ + P+ + L+ + +
Sbjct: 552 KNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRAL 611
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ ++ + +G P+ + S+L + R + + ++E G+Q + YN+L
Sbjct: 612 AGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSL 671
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + A G +A EI ++++S + + D +++++I +G + EA +EM+ G
Sbjct: 672 MDLYARGGECWKAEEILRELQNSGD-KSDLISYNTVIKGFCRQGLMHEALRTLSEMISRG 730
Query: 280 FEPNLFVLTSLIQCY---GKAQRTDDVVRALNR 309
P + + + Y G D+V+ + +
Sbjct: 731 IRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTK 763
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 117/243 (48%), Gaps = 36/243 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI ++ L+++EE+K G +P+ +TYN LLD G+++RP + + K+M
Sbjct: 253 YNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQME 312
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
N P+ TY SL+ AY R ED L + R+M +KG++ V Y TLL+ + G +
Sbjct: 313 SNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEE 372
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV------------------------- 265
A E+FE+M+ C+P+ TF+++I + RGK
Sbjct: 373 LAMEVFEEMRKV-GCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTL 431
Query: 266 ----------SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
SE +F EM + F P +LI YG+ D + A R+ E G+
Sbjct: 432 LAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGV 491
Query: 316 TPD 318
+PD
Sbjct: 492 SPD 494
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LIK+YG G F+ + V++E+K P+++T+N LL G+ +V +
Sbjct: 388 PNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGV 447
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM + +P +T+ +L+ AYGR + ++ Y+ M E G+ ++ YN +LA A
Sbjct: 448 FEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLAR 507
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +++ ++ +MK C+P+ T+SS++ + +V A+ E+ + +
Sbjct: 508 GGLWEQSEKVLAEMKDG-GCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAV 566
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+L +L+ K + RA + GI+PD +L++
Sbjct: 567 LLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSI 609
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNV 130
GS + + K+ R S+ ++ A + + +D +++LI Y + L V
Sbjct: 144 GSVIAVIVSILGKTGRVSRAASLLHNLEA--DGFEVDVYGYTSLITAYANNKKYRDALKV 201
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPW-----------------------------Q 161
+ +MK +G +P +ITYN +L+ G+ PW +
Sbjct: 202 FGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCR 261
Query: 162 VKTIYKEMTD-------NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
++Y+E D G P+ TY +LL YG++R ++ + V ++M+ + SV
Sbjct: 262 AGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVV 321
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
YN+L++ G ++A + M + +PD +T++++++ GK A +F E
Sbjct: 322 TYNSLVSAYVRGGLLEDALVLKRKM-VDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEE 380
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
M + G +PN+ +LI+ YG + +++V+ + +PD LL V Q
Sbjct: 381 MRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQ 437
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 1/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+TLI YG G+FD + Y+ M GV P++ TYN +L T+ R Q + + E
Sbjct: 461 DTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAE 520
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D G PN TY+SLL AY R E ++ E+ ++ L TL+ + + V
Sbjct: 521 MKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDL 580
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
E F + + PD T ++M++I + V +A + N M E+G +L
Sbjct: 581 LVETERAFLEFR-KRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYN 639
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ Y + + + + + GI PD
Sbjct: 640 SLMYMYSRTENFHKSEQIFREILDKGIEPD 669
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 115/243 (47%), Gaps = 3/243 (1%)
Query: 98 RARNEKWRI-DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
R RN++ + + + + ++ + G G ++ ++A G + ++ Y +L+
Sbjct: 133 RTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANN 192
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTL 215
K+ ++ +M + G P TY ++L YG+ +++ ++MK G+ +
Sbjct: 193 KKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCT 252
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
YNTL++ C +EA ++FE++K + +PD+ T+++++ + + EA + +M
Sbjct: 253 YNTLISCCRAGSLYEEALDLFEEIKVA-GFRPDAVTYNALLDVYGKSRRPKEAMEVLKQM 311
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
F P++ SL+ Y + +D + ++ + GI PD LL+ KE
Sbjct: 312 ESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKE 371
Query: 336 ELG 338
EL
Sbjct: 372 ELA 374
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ E + G+ P++ T N +L GR K + I M ++GL+ + +Y SL+ Y R
Sbjct: 588 FLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSR 647
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ ++RE+ +KG++ V YN ++ DEA I E+MK PD
Sbjct: 648 TENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPV-PDVV 706
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+++ I + EA + M++ G +PN S++ Y K + D+ + L
Sbjct: 707 TYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNL 766
Query: 311 PELG--ITPDDR 320
+L I+ D++
Sbjct: 767 GDLDPQISEDEK 778
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYE 132
K+ + VN K + + + R R I P+ ++ ++ +YG +
Sbjct: 569 KTLVLVNSKVDLLVETERAFLEFRKRG----ISPDVTTSNAMLSIYGRKKMVPKANEILN 624
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
M G+ ++ +YN+L+ R + + + I++E+ D G+ P+ +Y ++ AY R
Sbjct: 625 FMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRND 684
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ + EMK V YNT +A A EA ++ M + C+P+ T+
Sbjct: 685 MMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYM-IKQGCKPNHNTY 743
Query: 253 SSMI 256
+S++
Sbjct: 744 NSIV 747
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 63/130 (48%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++++L+ +Y NF ++ E+ G++P++I+YN ++ R + K I +EM
Sbjct: 637 SYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEM 696
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
P+ TY + + AY + + V R M ++G + + YN+++ +
Sbjct: 697 KVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLR 756
Query: 230 DEAFEIFEDM 239
DEA +++
Sbjct: 757 DEACSFVQNL 766
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 106 IDPNAFSTLIKLYGTAGN--FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P+ S I +Y N D + EEMK P+++TYN + +
Sbjct: 666 IEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAI 725
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ + M G PN NTY S++ Y + + ++ S + + + Q+S
Sbjct: 726 DVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLGDLDPQIS 774
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW P+A + LI +G AG + +N+ ++M + P+ TYNNL++ G +
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q + K+MTDNG+ P+ T+ +L AY R LS + MK ++ T +N +
Sbjct: 230 RQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + +G + +A ++F M+ C+PD TF+S++ + S RG++ A+F ML
Sbjct: 290 IYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAE 349
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ +L+ Y +++ + + GI PD LLN ++ +
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKA 409
Query: 339 KLVECVEKSNSKLGYVV--KLLLEEQDIEGDFKKEATELFNSISKDVKK 385
K V + + + VV L++ G F EA E+F + +D K
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNG-FLAEAVEIFRQMEQDGTK 457
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 75/299 (25%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ L+ Y G + L+V+ ++K G+ P++++Y +LL++ GR+++P + K
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAK 410
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M PN TY +L+ AYG + + + ++R+M++ G + +V TLLA C
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAAC 470
Query: 224 A-----------------------------------DVGYTDEAFEIFEDMKSSENCQPD 248
+ + ++A +++ M+ + + D
Sbjct: 471 SRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMR-KKKVKAD 529
Query: 249 SWTFSSMITICSCR------------------------------------GKVSEAEAMF 272
S TF+ +I+ SCR G+V+EAE++F
Sbjct: 530 SVTFTILIS-GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 588
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
N+M AG +P++ TS++ Y +++ + GI PD C L+ +
Sbjct: 589 NQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + + R D F++++ LY G + C V+E M A G+KPN+++YN L+
Sbjct: 310 RDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHG 369
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+++ ++ NG+ P+ +Y SLL +YGR+R V+ M+++ + +V YN
Sbjct: 370 MSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G+ EA EIF M+ + +P+ + +++ CS K E + +
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQME-QDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQS 488
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVV 304
G N S I Y A + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAI 515
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ ++ Y + + L+ +E MK V+P+ T+N ++ + + + Q ++ M D
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRD 311
Query: 172 NGLS--PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
P+ T+ S++ Y E+ +V+ M +G++ ++ YN L+ A G +
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ A +F D+K + PD +++S++ + +A+ +F M + +PN+ +
Sbjct: 372 ENALSVFGDIKRN-GIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 430
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
LI YG + V ++ + G P+ LL +++ K+
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKK 476
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S+++ Y G +++ +MK G KP++I Y ++L +++ + ++ EM
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
NG+ P+ ++L+RA+ + + + M+EK + + ++ + + C +
Sbjct: 627 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGAVFFEIFSACNTLQEW 686
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A ++ + M T + M+ + GKV +F +++ +G E N
Sbjct: 687 KRAIDLIQMMDPYLPSLSIGLT-NQMLYLFGKSGKVEAMMKLFYKIIASGVEINFKTYAI 745
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
L++ + L + + GI P ++
Sbjct: 746 LLEHLLAVGNWRKYIEVLEWMSDAGIQPSNQM 777
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 102/221 (46%), Gaps = 5/221 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A++ ++ A+++ I Y A + + +Y+ M+ VK + +T+ L+ R +
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSK 545
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + KEM D + Y+S+L AY + + S++ +MK G + V Y +
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTS 605
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-- 276
+L +A E+F +M+++ +PDS S+++ + G+ S + + M
Sbjct: 606 MLHAYNASEKWGKACELFLEMEAN-GIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Query: 277 EAGFEPNLFV-LTSLIQCYGKAQRTDDVVRALN-RLPELGI 315
E F +F + S + +R D+++ ++ LP L I
Sbjct: 665 EVPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 705
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 167/346 (48%), Gaps = 9/346 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D + TLI ++ +G + +++Y M+ +G+ P+ TY+ +++ +G+ +
Sbjct: 429 YQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAY 488
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM DNG +PN TY ++ +AR ++ + +YR+M+ G + Y+ ++ +
Sbjct: 489 KLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVL 548
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G+ DEA +F +M+ + PD + ++ + G V +A ++ ML+ G +PN
Sbjct: 549 GHCGHLDEAEAVFLEMR--RDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPN 606
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+ SL+ + K R D L + G+ P + LL+ T ++G +
Sbjct: 607 VPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLSCCTDA-HAQMGLCCQL 665
Query: 344 VEKSNSKLGYVVKLLLEEQDIEG----DFKKEATELFNSISKDVKKAYCNCLIDLCVNLN 399
+ + ++ L L + + G D + ++ +S ++ K+ + +ID
Sbjct: 666 MAITGHP-AHMFLLYLPDAEPGGENVRDHARYFLDMMHSEDRESKRGIMDAVIDFLHKSG 724
Query: 400 LLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTAL 444
L E A + E+ VY D ++ +S + W ++L +S G A+TAL
Sbjct: 725 LKEEAGFIWEVAAQRNVYPDSVREKSSSYWLINLHLMSEGTAVTAL 770
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 36/181 (19%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G K + TY ++ +G+AK+ ++ + EM+ P TY ++ AYGRA
Sbjct: 358 GFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRAN----- 412
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
Y EA ++FE+M+ + QPD T+ ++I
Sbjct: 413 ------------------------------YLREAVKVFEEMEGA-GYQPDRVTYCTLID 441
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
I + G + A ++ M E G P+ F ++++ C GK + + + + G TP
Sbjct: 442 IHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTP 501
Query: 318 D 318
+
Sbjct: 502 N 502
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++ G + Y T++ + ++ ++M SS NC+P T++ +I
Sbjct: 355 RQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEM-SSVNCKPTVVTYNRIIHAYGRANY 413
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ EA +F EM AG++P+ +LI + K+ + + R+ E+G++PD
Sbjct: 414 LREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSA 473
Query: 325 LLNVM 329
++N +
Sbjct: 474 MVNCL 478
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
EK+ +D A++T++ Y G + ++++ +MK IG+ P ++TYN +LD G+ R W
Sbjct: 209 EKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWD 268
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + EM GL + T ++++ A GR ++ E+K G + YN++L
Sbjct: 269 RILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSML 328
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA I ++M+ + NC PDS T++ + G + E A+ + M G
Sbjct: 329 QVFGKAGIYTEALSILKEMEDN-NCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGV 387
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
PN T++I YGKA R DD +R + + +LG P+ +L ++ + + E
Sbjct: 388 MPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIK 447
Query: 341 VECVEKSNS 349
V C K N
Sbjct: 448 VLCEMKLNG 456
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++++++++G AG + L++ +EM+ P+ +TYN L T RA + + MT
Sbjct: 324 YNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMT 383
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN TY +++ AYG+A +D L ++ MK+ G +V YN++LAM T+
Sbjct: 384 SKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTE 443
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ ++ +MK + C P+ T+++M+ +CS GK + + EM GFEP+ +L
Sbjct: 444 DVIKVLCEMKLN-GCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTL 502
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I Y + D + + + G TP LLN + +
Sbjct: 503 ISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAR 543
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L Y AG D + V + M + GV PN ITY ++D G+A R ++
Sbjct: 355 DSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLF 414
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M D G +PN TY S+L G+ ED + V EMK G + +NT+LA+C++
Sbjct: 415 SLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEE 474
Query: 227 GYTDEAFEIFEDMKSSENC--QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + ++ +MK NC +PD TF+++I+ + G ++ M+ EM+++GF P +
Sbjct: 475 GKHNYVNKVLREMK---NCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCV 531
Query: 285 FVLTSLIQCYGKAQRTD 301
+L+ A+R D
Sbjct: 532 TTYNALLNAL--ARRGD 546
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N + D + F+TLI Y G+ +Y EM G P + TYN LL+ + R
Sbjct: 488 KNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDW 547
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+++ ++M G PN N+Y+ LL Y +A + V +E+ + + S L TL
Sbjct: 548 KAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTL 607
Query: 220 LAM---CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+ C + + AF D +PD +SM+++ + S+A M + +
Sbjct: 608 VLTNHKCRHLRGMERAF----DQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIH 663
Query: 277 EAGFEPNLFVLTSLIQCY---GKAQRTDDVVRAL-NRLPE 312
E G +PNLF L+ Y G+ + ++V++ + N PE
Sbjct: 664 ECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPE 703
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E+++D + + ++ D ++++ ++ F + + G++PN+ TYN L+D
Sbjct: 621 ERAFD-QLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMD 679
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
R W+ + + K + ++G P+ +Y ++++ + R ++ + V EM KG+Q
Sbjct: 680 LYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQP 739
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ YNT L+ A + DEA E+ M NC+P T+ ++ GK EA
Sbjct: 740 TIVTYNTFLSGYAGMELFDEANEVIRFM-IEHNCRPSELTYKILVDGYCKAGKYEEA 795
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 101/214 (47%), Gaps = 7/214 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYE-EMKAIGVKPNMITYNNLLDTM----GRAKRPWQVKTI 165
F +L+K +GN++ L ++E G N+ N +++ M GR + +
Sbjct: 143 FPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKL 202
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ + S + Y ++L +Y R + + ++ +MKE G+ ++ YN +L +
Sbjct: 203 FDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGK 262
Query: 226 VGYT-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G + D E+ ++M+S + + D +T S++I+ C G + EA E+ G++P
Sbjct: 263 MGRSWDRILELLDEMRS-KGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGT 321
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S++Q +GKA + + L + + PD
Sbjct: 322 VTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPD 355
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 36/256 (14%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNV----------------------------- 130
R + ++ + N++S L+ Y AGN G V
Sbjct: 558 RTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHL 617
Query: 131 ------YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+++++ G KP+++ N++L R K + + + + + GL PN TY L
Sbjct: 618 RGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCL 677
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ Y R V + ++ G + V YNT++ G EA + +M +++
Sbjct: 678 MDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEM-TTKG 736
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
QP T+++ ++ + EA + M+E P+ L+ Y KA + ++ +
Sbjct: 737 IQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAM 796
Query: 305 RALNRLPELGITPDDR 320
++++ EL I+ DD+
Sbjct: 797 DFVSKIKELDISFDDQ 812
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 199/422 (47%), Gaps = 27/422 (6%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++++ +++++K+Y ++ + VY+ +K G++P+ TYN L+ R +RP +
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ ++M + GL P +TY SL+ A+G+ + E ++ E+ KG++L + Y+T++ +
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D G +A ++ + MK++ +P T ++ S G EAE + + + + E
Sbjct: 1043 RDSGSDSKAEKLLQMMKNA-GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT-QTPKEELGKLVE 342
+S+I Y +++ + + L + + G+ PD R C + + K E+ L++
Sbjct: 1102 TLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLK 1161
Query: 343 CVEKSNSKLGYVVKLL-----LEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
+E L ++LL L +++G F+K SI + + N L++L
Sbjct: 1162 ALEDIGFDLP--IRLLAGRPELLVSEVDGWFEK-----LKSIEDNAALNFVNALLNLLWA 1214
Query: 398 LNLLENACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALE 456
L A + +LG+ +++ D+ + W + LS GAAL A +LE
Sbjct: 1215 FELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALDA----------SLE 1264
Query: 457 SGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSW 516
E P + + TG +Y+ L ++ L E+ +PF + G + + + W
Sbjct: 1265 GYPESPKSVVLITGTA--EYNGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRMW 1322
Query: 517 LE 518
L+
Sbjct: 1323 LK 1324
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 118/233 (50%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN R D ++TL+ N DG + V+E+M+A +P++ TYN ++ GR
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++ E+ G P+ TY SLL A+ R R E VY++M++ G YNT
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M G D A ++++DMK PD+ T++ +I + EA A+ +EML+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
G +P L ++LI Y KA + ++ + + G PD+ +L+V+ +
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 38/213 (17%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D ++T+I +YG G D L +Y++MK + G P+ ITY L+D++G+A R + +
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM D G+ P TY++L+ Y +A
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKA---------------------------------- 486
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA + F M S +PD+ +S M+ + + +A ++ +M+ G P+
Sbjct: 487 -GKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYT 544
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPEL-GITP 317
+ +I K R+DD+ + + + EL G+ P
Sbjct: 545 LYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +I+ YG + +V ++ G P++ T+N+L+ + + + I+ M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G SP + LL A E+ V E+++ G ++S + +L A G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTS 289
E +I+ MK++ P + MI + C+GK V +AE M +EM EA F+ L + S
Sbjct: 875 EVKKIYSSMKAA-GYLPTIRLYRMMIELL-CKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+++ Y + V+ R+ E G+ PD+ L+ + + + E G L+
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLL 984
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G + V EE++ +G K + + +LD RA ++VK IY M G P Y
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
++ + + D + EM+E ++ + ++N++L M + + ++++ +K
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
Query: 242 SENCQPDSWTFSSMITICSCRGKV-SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+ +PD T++++I I CR + E + +M G +P L SLI +GK +
Sbjct: 956 T-GLEPDETTYNTLI-IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNV 328
+ + L G+ D F ++ +
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEM---TDNGLSPNWNTYASLLRAYGRARYGEDT 197
PN +L +GR W +++ E+ + + Y +++ Y R+
Sbjct: 189 PNARMVAAILGVLGR----WNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKA 244
Query: 198 LSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ M+++G + +NTL+ A G T DM + +PD+ T+++++
Sbjct: 245 QELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLL 304
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ CS + A +F +M +P+L+ ++I YG+ + R L G
Sbjct: 305 SACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF 364
Query: 317 PD 318
PD
Sbjct: 365 PD 366
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
S T+Y TLL C + EA ++F D++ S C+ SM+ + G A +
Sbjct: 680 SSTMYETLLHCCVANEHYAEASQVFSDLRLS-GCEASESVCKSMVVVYCKLGFPETAHQV 738
Query: 272 FNEMLEAGFE----PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
N+ GF P + T +I+ YGK + + L + G TPD + L++
Sbjct: 739 VNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMS 795
Query: 328 VMTQ 331
Q
Sbjct: 796 AYAQ 799
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 186/418 (44%), Gaps = 11/418 (2%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + ++ +I LY G++ V++ M+ IG P+ T+N L+ R + + + +
Sbjct: 819 LDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQAL 878
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM G +PN +TY +L+ AYGR + ED V++ + E G + T YN ++ +
Sbjct: 879 LREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRK 938
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + EI E MK + +P T ++ G +AE + + E G P+
Sbjct: 939 AGEHRKIEEIIEQMK-VDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAI 997
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
TS+I + + V L ++ + + P C + + + + +
Sbjct: 998 HYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGAASVCERSSHALM---LL 1054
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA---YCNCLIDLCVNLNLLE 402
K+ S+ G+ + L L + ++ ++F+ + + +A N L+DL
Sbjct: 1055 KALSEAGFSLPLRL-MTECTPKVVQDMQDIFDQLQESGPEACQGVVNVLMDLLWAFRQCA 1113
Query: 403 NACKLLELGLTLEVYTDIQSRSPTQ-WSLHLKSLSLGAALTALHIWINDLSKALESGEEF 461
A + + + +YT + +R + W + LS GA+L AL +W++ + A G
Sbjct: 1114 TAALVFAVAIESNIYTQVLARVKDRNWGADFRRLSPGASLVALILWLDQMQDASLQGSPV 1173
Query: 462 PPLLGINTGHGKHKYSDKG-LASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
PP I G K +++ + + ++HL ++ +PF S + G + A WL+
Sbjct: 1174 PP-KSIQIDIGSSKLNNQASVRNTIKAHLWQMGSPFLPSKTRAGVLVAKSHALCMWLK 1230
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 38/273 (13%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+A+S L+ Y GNF+ + M A G++PN N +L+ GRA + ++ ++
Sbjct: 682 SAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQR 741
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE---------------------- 206
+ + G+SPN T+ + A+ R E+ S+YR+MKE
Sbjct: 742 LPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETV 801
Query: 207 -------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
G++L + +YN ++++ + +G A +F+ M+ C PD+ TF+
Sbjct: 802 EIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEI-GCSPDATTFN 860
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I + S V EA+A+ EM++ G PN+ T+LI YG+ Q +D + E
Sbjct: 861 TLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAET 920
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
G PD ++NV + + K+ E +E+
Sbjct: 921 GCKPDATAYNVMINVYRKAGEHR--KIEEIIEQ 951
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TLI + ++EEM+ G P++ TYN ++ GRA R +
Sbjct: 193 RPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASS 252
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I++ M + G +P+ TY S+L A+ R E+ + M++ YNT++ M
Sbjct: 253 IFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYG 312
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +A E++ MK C PDS TF+ +I G V+EA AMF +ML++ P L
Sbjct: 313 KAGMHRKAEELYVQMKEEGRC-PDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTL 371
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+++I Y KA D + + G+ PD +L+V
Sbjct: 372 QAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDV 415
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 107 DPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ ++ +I +YG AG + +++ M+ G P+ +TYN++L R R +V+
Sbjct: 228 DPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVER 287
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I M D S + TY +++ YG+A +Y +MKE+G + L+
Sbjct: 288 IRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLG 347
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G+ +EA +FEDM S+ +P FS+MI + ++AE ++ ML AG P+L
Sbjct: 348 KAGFVNEAAAMFEDMLKSQ-VRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDL 406
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ ++ + KA + + + G+ P+ ++ V Q
Sbjct: 407 LAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQ 453
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS-VYRE 203
YN+L+ R V+ + M D G P+ T+ +++A R E S + ++
Sbjct: 127 VYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQD 186
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+ G++ YNTL++ C+ +A IFE+M+ + C PD WT+++MI++ G
Sbjct: 187 VYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQR-QGCDPDIWTYNAMISVYGRAG 245
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+V A ++F M E GF P+ S++ + + R ++V R
Sbjct: 246 RVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVER 287
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D ++T+I +YG AG +Y +MK G P+ +T+ L+DT+G+A
Sbjct: 293 RDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFV 352
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++++M + + P +++++ AY +A D Y M G++ + Y+ +
Sbjct: 353 NEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVM 412
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L + G ++ +++ M S +P+ ++ M+ + + V+E E + EM++
Sbjct: 413 LDVFFKAGMPEKCIILYKAMVGS-GLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQ 469
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 90/217 (41%), Gaps = 45/217 (20%)
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
+ +++ +YG+ + ++ V+R++++ G + + Y+ LL+ A+ G + A ++M
Sbjct: 649 HVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNM- 707
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+ AG +PN +++ +G+A +
Sbjct: 708 -----------------------------------VAAGLQPNATCANYVLEAFGRAGKA 732
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV--ECVEKSNSKLGYVVKLL 358
++ RLPE+GI+P+ R + + ++ E + + + E S V K L
Sbjct: 733 KEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKAL 792
Query: 359 LEEQDIEGDFKKEATEL-FNSISKDVKKAYCNCLIDL 394
L + +E E+ + KD+KKA ID+
Sbjct: 793 L------ALYSRETVEIDAEELVKDIKKAGLELDIDI 823
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 35/222 (15%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D A+S ++ ++ AG + C+ +Y+ M G+KP + Y ++ + +++
Sbjct: 403 RPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIEN 462
Query: 165 IYKEMTD------------------------------NGLSPNWNTYASLLRAYGRARYG 194
+ KEM G++ T +L A+ +
Sbjct: 463 LSKEMVQSSASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKL 522
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFS 253
D + + ++ LY L M A G EA E+M++S+ Q F
Sbjct: 523 SDARDLVHAVSSIEPSVAAHLYKRLAVMLAKAGRFSEA---EEEMRTSQTYGQVQVSDFL 579
Query: 254 SMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
++ R G EA A F +M G E + VL + + CY
Sbjct: 580 KVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCY 621
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 6/286 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW P+A + LI +G AG + +N+ ++M + P+ TYNNL++ G +
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MTDNG+ P+ T+ +L AY R LS + MK ++ T +N +
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + +G + +A ++F M+ C+PD TF+S++ + S +G++ A+F M+
Sbjct: 290 IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 349
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ +L+ Y + + L + + GI PD CLLN ++ +
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 339 KLVECVEKSNSKLGYVV--KLLLEEQDIEGDFKKEATELFNSISKD 382
K V + + + VV L++ G F EA E+F + +D
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNG-FLAEAVEIFRQMEQD 454
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R E+ + + ++ LI YG+ G + ++ +M+ G+KPN+++ LL R+K+
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
V T+ G++ N Y S + +Y A E +++Y+ M++K ++ + L
Sbjct: 477 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 536
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++ + EA ++M+ + +SS++ S +G+V+EAE++FN+M AG
Sbjct: 537 ISGSCRMSKYPEAISYLKEMEDL-SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
EP++ TS++ Y +++ + GI PD C L+ +
Sbjct: 596 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + + R D F++++ LY G + C V+E M A G+KPN+++YN L+
Sbjct: 310 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
++ ++ NG+ P+ +Y LL +YGR+R V+ M+++ + +V YN
Sbjct: 370 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G+ EA EIF M+ + +P+ + +++ CS K + + +
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQME-QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVV 304
G N S I Y A + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAI 515
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 102/226 (45%), Gaps = 3/226 (1%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ ++ Y + + L+ +E MK V+P+ T+N ++ + + + Q ++ M +
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 172 NGLS--PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
P+ T+ S++ Y E+ +V+ M +G++ ++ YN L+ A G +
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A + D+K + PD +++ ++ + +A+ +F M + +PN+ +
Sbjct: 372 GTALSVLGDIKQN-GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 430
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
LI YG + V ++ + GI P+ LL +++ K+
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/212 (17%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S+++ Y G +++ +MK G +P++I Y ++L +++ + ++ EM
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
NG+ P+ ++L+RA+ + + + M+EK + + ++ + + C +
Sbjct: 627 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEW 686
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A ++ + M T + M+ + GKV +F +++ +G NL
Sbjct: 687 KRAIDLIQMMDPYLPSLSIGLT-NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 745
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
L++ + L + GI P ++
Sbjct: 746 LLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQM 777
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 6/286 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW P+A + LI +G AG + +N+ ++M + P+ TYNNL++ G +
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MTDNG+ P+ T+ +L AY R LS + MK ++ T +N +
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + +G + +A ++F M+ C+PD TF+S++ + S +G++ A+F M+
Sbjct: 290 IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 349
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ +L+ Y + + L + + GI PD CLLN ++ +
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 339 KLVECVEKSNSKLGYVV--KLLLEEQDIEGDFKKEATELFNSISKD 382
K V + + + VV L++ G F EA E+F + +D
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNG-FLAEAVEIFRQMEQD 454
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R E+ + + ++ LI YG+ G + ++ +M+ G+KPN+++ LL R+K+
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
V T+ G++ N Y S + +Y A E +++Y+ M++K ++ + L
Sbjct: 477 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTIL 536
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++ + EA ++M+ + +SS++ S +G+V+EAE++FN+M AG
Sbjct: 537 ISGSCRMSKYPEAISYLKEMEDL-SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
EP++ TS++ Y +++ L + GI PD C L+ +
Sbjct: 596 CEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEPDSIACSALMRAFNK 647
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + + R D F++++ LY G + C V+E M A G+KPN+++YN L+
Sbjct: 310 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
++ ++ NG+ P+ +Y LL +YGR+R V+ M+++ + +V YN
Sbjct: 370 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G+ EA EIF M+ + +P+ + +++ CS K + + +
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQME-QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVV 304
G N S I Y A + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAI 515
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 102/226 (45%), Gaps = 3/226 (1%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ ++ Y + + L+ +E MK V+P+ T+N ++ + + + Q ++ M +
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 172 NGLS--PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
P+ T+ S++ Y E+ +V+ M +G++ ++ YN L+ A G +
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A + D+K + PD +++ ++ + +A+ +F M + +PN+ +
Sbjct: 372 GTALSVLGDIKQN-GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 430
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
LI YG + V ++ + GI P+ LL +++ K+
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/212 (17%), Positives = 90/212 (42%), Gaps = 1/212 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S+++ Y G +++ +MK G +P++I Y ++L +++ + + EM
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEM 626
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
NG+ P+ ++L+RA+ + + + M+EK + + ++ + + C +
Sbjct: 627 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEW 686
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A ++ + M T + M+ + GKV +F +++ +G NL
Sbjct: 687 KRAIDLIQMMDPYLPSLSIGLT-NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 745
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
L++ + L + GI P ++
Sbjct: 746 LLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQM 777
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 6/286 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW P+A + LI +G AG + +N+ ++M + P+ TYNNL++ G +
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MTDNG+ P+ T+ +L AY R LS + MK ++ T +N +
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + +G + +A ++F M+ C+PD TF+S++ + S +G++ A+F M+
Sbjct: 290 IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 349
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ +L+ Y + + L + + GI PD CLLN ++ +
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 339 KLVECVEKSNSKLGYVV--KLLLEEQDIEGDFKKEATELFNSISKD 382
K V + + + VV L++ G F EA E+F + +D
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNG-FLAEAVEIFRQMEQD 454
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 134/328 (40%), Gaps = 96/328 (29%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL-------- 149
R + + R D F++++ LY G + C V+E M A G+KPN+++YN L
Sbjct: 310 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 150 ---------------------------LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
L++ GR+++P + K ++ M PN TY
Sbjct: 370 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA------------------ 224
+L+ AYG + + + ++R+M++ G++ +V TLLA C+
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR 489
Query: 225 -----------------DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR----- 262
+ ++A +++ M+ + + DS TF+ +I+ SCR
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMR-KKKVKADSVTFTILIS-GSCRMSKYP 547
Query: 263 -------------------GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
G+V+EAE++FN+M AG EP++ TS++ Y +++
Sbjct: 548 EAISYLKEMEDLSIPLTKEGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 607
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ GI PD C L+ +
Sbjct: 608 CELFLEMEANGIEPDSIACSALMRAFNK 635
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 102/226 (45%), Gaps = 3/226 (1%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ ++ Y + + L+ +E MK V+P+ T+N ++ + + + Q ++ M +
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 172 NGLS--PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
P+ T+ S++ Y E+ +V+ M +G++ ++ YN L+ A G +
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A + D+K + PD +++ ++ + +A+ +F M + +PN+ +
Sbjct: 372 GTALSVLGDIKQN-GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 430
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
LI YG + V ++ + GI P+ LL +++ K+
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
+++ +MK G +P++I Y ++L +++ + ++ EM NG+ P+ ++L+RA+
Sbjct: 574 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 633
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ + + M+EK + + ++ + + C + A ++ + M
Sbjct: 634 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 693
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T + M+ + GKV +F +++ +G NL L++ + L
Sbjct: 694 GLT-NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLE 752
Query: 309 RLPELGITPDDRF 321
+ GI P ++
Sbjct: 753 WMSGAGIQPSNQM 765
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 119/233 (51%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN R D ++TL+ N +G + V+E+M+A +P++ TYN ++ GR
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++ E+ G SP+ TY SLL A+ R R E VY++M++ G YNT
Sbjct: 348 AAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M G D A ++++DMK PD+ T++ +I + EA A+ +EML+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDV 467
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
G +P L ++LI Y KA + ++ + + G PD+ +L+V+ +
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 198/425 (46%), Gaps = 33/425 (7%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++++ +++++K+Y ++ + VY+ +K G++P+ TYN L+ R +RP +
Sbjct: 923 FKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ ++M + GL P +TY SL+ A+G+ + E ++ E+ KG++L + Y+T++ +
Sbjct: 983 SLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D G +A ++ + MK++ +P T ++ S G EAE + + + E
Sbjct: 1043 RDSGSDSKAEKLLQMMKNA-GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELT 1101
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPEL---GITPDDRFCGCLLNVMT-QTPKEELGK 339
+S+I Y R+ D + RL E+ G+ PD R C + + K E+
Sbjct: 1102 TLPYSSVIDAY---LRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVML 1158
Query: 340 LVECVEKSNSK-----LGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
L++ ++ LG +LL+ E ++G F+K SI + + N L++L
Sbjct: 1159 LLKALQDIGFDIPIRLLGGRPELLVSE--VDGCFEK-----LKSIEDNAALNFANALLNL 1211
Query: 395 CVNLNLLENACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
L + + +L + +++ D+ + W + LS GAAL A
Sbjct: 1212 LWAFELRATSSWVFQLAIKRGIFSLDVFRVADKDWGADFRRLSGGAALDA---------- 1261
Query: 454 ALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAA 513
+LE E P + + TG +Y+ L ++ L E+ +PF + G + +
Sbjct: 1262 SLEGYPESPKSVVLITGTA--EYNGVSLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSL 1319
Query: 514 KSWLE 518
+ WL+
Sbjct: 1320 RMWLK 1324
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 38/213 (17%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D ++T+I +YG G D L +Y++MK + G P+ ITY L+D++G+A R + +
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAAL 460
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM D G+ P TY++L+ Y +A
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKA---------------------------------- 486
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA + F M S +PD+ +S M+ + + +A ++ +M+ G P+
Sbjct: 487 -GKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHS 544
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPEL-GITP 317
+ +I K R+DDV + + + EL G+ P
Sbjct: 545 LYELMILGLMKENRSDDVQKTIRDMEELCGMNP 577
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G + V EE++ +G K + + +LD RA ++V IY M G P Y
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLY 895
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
++ + + D + EM+E ++ + ++N++L M + + ++++ +K
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKE 955
Query: 242 SENCQPDSWTFSSMITICSCRGKV-SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
S +PD T++++I I CR + E ++ +M G +P L SLI +GK +
Sbjct: 956 S-GLEPDETTYNTLI-IMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNV 328
+ + L G+ D F ++ +
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 3/229 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +I+ YG + +V ++ G P++ T+N+L+ + + I+ M
Sbjct: 755 YTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMM 814
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G SP + LL A E+ V E+++ G ++S + +L A G
Sbjct: 815 RDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTS 289
E +I+ MK++ P + MI + C+GK V +AE M +EM EA F+ L + S
Sbjct: 875 EVNKIYSSMKAA-GYLPTIRLYRMMIELL-CKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
+++ Y + V+ R+ E G+ PD+ L+ + + + E G
Sbjct: 933 MLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEG 981
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 77/182 (42%), Gaps = 8/182 (4%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEM---TDNGLSPNWNTYASLLRAYGRARYGEDT 197
PN +L +GR W +++ E+ + + Y +++ Y R+
Sbjct: 189 PNARMVAAILGVLGR----WNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKA 244
Query: 198 LSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ M+++G + +NTL+ A G T DM + +PD+ T+++++
Sbjct: 245 QELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLL 304
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ CS + A +F +M +P+L+ ++I YG+ + R L G +
Sbjct: 305 SACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFS 364
Query: 317 PD 318
PD
Sbjct: 365 PD 366
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 33/177 (18%)
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
T+Y TLL C + EA ++F +++ S C+P SM+ + G A + N
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSELRLS-GCEPSESVCKSMVVVYCKLGFPETAYQVVN 740
Query: 274 EMLEAGFE----PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF-------- 321
+ GF P + T +I+ YGK + + L + G TPD +
Sbjct: 741 QAETKGFHFACSP---MYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAY 797
Query: 322 --CGC------LLNVMTQ---TPK-EELGKLVE--CVEKSNSKLGYVVKLLLEEQDI 364
CGC + N M + +P E + KL+ CV+ +L VV+ E QD+
Sbjct: 798 AECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVE---ELQDM 851
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 6/286 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW P+A + LI +G AG + +N+ ++M + P+ TYNNL++ G +
Sbjct: 38 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 97
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MTDNG+ P+ T+ +L AY R LS + MK ++ T +N +
Sbjct: 98 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 157
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + +G + +A ++F M+ C+PD TF+S++ + S +G++ A+F M+
Sbjct: 158 IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 217
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ +L+ Y + + L + + GI PD CLLN ++ +
Sbjct: 218 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 277
Query: 339 KLVECVEKSNSKLGYVV--KLLLEEQDIEGDFKKEATELFNSISKD 382
K V + + + VV L++ G F EA E+F + +D
Sbjct: 278 KEVFLMMRKERRKPNVVTYNALIDAYGSNG-FLAEAVEIFRQMEQD 322
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K K R E+ + + ++ LI YG+ G + ++ +M+ G+KPN+++ LL
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
R+K+ V T+ G++ N Y S + +Y A E +++Y+ M++K ++
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+ L++ + EA ++M+ + +SS++ S +G+V+EAE+
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDL-SIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+FN+M AG EP++ TS++ Y +++ + GI PD C L+
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN 514
Query: 331 Q 331
+
Sbjct: 515 K 515
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + + R D F++++ LY G + C V+E M A G+KPN+++YN L+
Sbjct: 178 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 237
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
++ ++ NG+ P+ +Y LL +YGR+R V+ M+++ + +V YN
Sbjct: 238 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 297
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G+ EA EIF M+ + +P+ + +++ CS K + + +
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQME-QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVV 304
G N S I Y A + +
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAI 383
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 102/226 (45%), Gaps = 3/226 (1%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ ++ Y + + L+ +E MK V+P+ T+N ++ + + + Q ++ M +
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 172 NGLS--PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
P+ T+ S++ Y E+ +V+ M +G++ ++ YN L+ A G +
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 239
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A + D+K + PD +++ ++ + +A+ +F M + +PN+ +
Sbjct: 240 GTALSVLGDIKQN-GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 298
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
LI YG + V ++ + GI P+ LL +++ K+
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 344
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/212 (17%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S+++ Y G +++ +MK G +P++I Y ++L +++ + ++ EM
Sbjct: 435 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 494
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
NG+ P+ ++L+RA+ + + + M+EK + + ++ + + C +
Sbjct: 495 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEW 554
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A ++ + M T + M+ + GKV +F +++ +G NL
Sbjct: 555 KRAIDLIQMMDPYLPSLSIGLT-NQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 613
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
L++ + L + GI P ++
Sbjct: 614 LLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQM 645
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 183/425 (43%), Gaps = 22/425 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI ++ AG D +++Y+ M+ G+ P+ TY+ +++ +G+A ++
Sbjct: 446 DRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLF 505
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM ++G PN TY ++ +AR E L +Y +M+ G Q Y+ ++
Sbjct: 506 CEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHC 565
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY +EA +F +M+ +N PD + ++ + G V +A + ML AG PN+
Sbjct: 566 GYLEEAESVFVEMQ-QKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPT 624
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT-PKEELGKLVECVE 345
SL+ + + R D + + LG+ P + LL+ T+ P ++G E +
Sbjct: 625 CNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLLSCCTEAQPAHDMGFFCELMA 684
Query: 346 KSNSKLGYVVKLLLEEQDIEG-------DFKKEATELFNSISKDVKKAYCNCLIDLCVNL 398
+ G+ L G D + ++ ++ ++ K+ + +++
Sbjct: 685 VT----GHPAHAFLLSMPAAGPDGQNVRDHVSKFLDMMHTEDREGKRGLVDSVVNFLNKS 740
Query: 399 NLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGAALTALH---IWINDLSKA 454
L E A + E VY D ++ +S W ++L +S G A+TAL W +
Sbjct: 741 GLKEEAGSVWEAAAQRNVYPDAVKEKSSRYWLINLHVMSDGTAVTALSRTLAWFRQ--RM 798
Query: 455 LESGEEFPPLLGINTGHGKH-KYSDKGLA-SVFESHLKELNAPFHDSPDKVGWFLTTEAA 512
L SG P + I TG G+ K + L + L + PF G F+
Sbjct: 799 LVSGIR-PSRVDIITGWGRRSKVTGSSLVRQAVQDLLHTFSFPFLAEKGNSGCFVGCGEP 857
Query: 513 AKSWL 517
WL
Sbjct: 858 LCQWL 862
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++ G + Y T++ + D ++ E M + CQP+ T++ +I C
Sbjct: 369 RQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQM-VKDGCQPNVVTYNRLIHCYGCANY 427
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ EA +FNEM E G EP+ +LI + KA D + R+ E G++PD
Sbjct: 428 LKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSV 487
Query: 325 LLNVM 329
++N +
Sbjct: 488 IINCL 492
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N ++ D +S +++ G G + +V+ EM+ P+ Y L+D G+A
Sbjct: 544 QNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNV 603
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ Y+ M + GL PN T SLL A+ R D ++ + M G++ S+ Y L
Sbjct: 604 EKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLL 663
Query: 220 LAMCAD 225
L+ C +
Sbjct: 664 LSCCTE 669
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 5/186 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + W D + L+ L+G AGN + Y+ M G+ PN+ T N+LL R R
Sbjct: 579 QQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRL 638
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + M GL P+ TY LL A+ D + + E+ + ++
Sbjct: 639 PDAYNLVQSMVALGLRPSLQTYTLLLSCCTEAQPAHD-MGFFCELMAVTGHPAHAFLLSM 697
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
A D + F DM +E+ + S++ + G EA +++ EA
Sbjct: 698 PAAGPDGQNVRDHVSKFLDMMHTEDREGKRGLVDSVVNFLNKSGLKEEAGSVW----EAA 753
Query: 280 FEPNLF 285
+ N++
Sbjct: 754 AQRNVY 759
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F+ ++ + D T+++M+ I + + +M++ G +PN+ LI
Sbjct: 360 ALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLI 419
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
CYG A + + N + E+G P DR C L
Sbjct: 420 HCYGCANYLKEALNVFNEMQEVGCEP-DRVTYCTL 453
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 190/463 (41%), Gaps = 58/463 (12%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN ++ LI YG A + D L ++ M+ +G +P+ +TY L+D +A
Sbjct: 99 EPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAME 158
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y++M G P+ TY+ ++ G+A ++ EM ++G S+ YN ++ + A
Sbjct: 159 LYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHA 218
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D A +++ D++ PD T+ ++ + G + +AE +F EM AG+ +
Sbjct: 219 KAGKFDMALKLYSDLQEV-GYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADN 277
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM--------------- 329
+ ++ +GK + + NR+ + G+ P+ C LL+
Sbjct: 278 PIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGG 337
Query: 330 ---------TQTPKEELGKLVEC--VEKSNSKLG-----------YVVKLLLEEQDIEGD 367
QT L C + ++ G +V LL G
Sbjct: 338 MAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMGGTGHPAHPFVCSLLASGGTAGGT 397
Query: 368 FKKEATELFNSIS---KDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD----- 419
F+++ + ++ + + LID L A K + G EV +
Sbjct: 398 MVVGIRCFFDAMQFEELESRRGFADSLID------FLHRAGKAVAAGSVWEVAAEKNLYP 451
Query: 420 --IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS 477
++ ++P WS++L +S G AL AL + ++A+ P + I TG G+
Sbjct: 452 NAVREKAPQYWSINLHVMSTGTALVALARTLAMFAEAVVRTGAAPYRIDIITGWGRRSRV 511
Query: 478 DKG--LASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
+ E L+ LN+PFH VG F+ A WL+
Sbjct: 512 PGASLVKQAVEGMLRSLNSPFHLDGLNVGCFVGQGPALAEWLK 554
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 100/195 (51%), Gaps = 1/195 (0%)
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G K ++ TY +L +GRAK + + EM G PN TY L+ YGRA
Sbjct: 59 KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ +L ++ M+ G + Y TL+ + A G+ D A E++ M+ + +PD++T+S
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHA-GFRPDTFTYSI 177
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I GK++ A +F EM + G+ P+L +I + KA + D ++ + L E+G
Sbjct: 178 IIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVG 237
Query: 315 ITPDDRFCGCLLNVM 329
PD G ++ V+
Sbjct: 238 YAPDRVTYGIIMEVL 252
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A+ F + + D T+++++ I + +EM+ G EPN+ LI
Sbjct: 50 AYNFFIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLI 109
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
CYG+A D ++ N + +G PD
Sbjct: 110 HCYGRANDLDSSLKLFNVMQMVGCEPD 136
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI ++ V+EEMKA G P+ +TYN LLD G+++RP + +
Sbjct: 290 DLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVL 349
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM +G +P+ TY SL+ AY R ++ + + +M +KG++ V Y TLL+
Sbjct: 350 KEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKT 409
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSM-------------------ITICSC------ 261
G D A ++FE+M+ + CQP+ TF+++ I IC C
Sbjct: 410 GKDDYAMKVFEEMRVA-GCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVT 468
Query: 262 ----------RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
G SE +F EM AGF P +LI Y + D + R+
Sbjct: 469 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML 528
Query: 312 ELGITPD 318
+ G+TPD
Sbjct: 529 DAGVTPD 535
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LIK++G GNF + V+EE+K P+++T+N LL G+ +V +
Sbjct: 429 PNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGV 488
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM G P +T+ +L+ AY R + + +++YR M + G+ ++ YN +LA A
Sbjct: 489 FKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALAR 548
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +++ ++ +MK C+P+ T+ S++ + +V A+ E+ EP
Sbjct: 549 GGLWEQSEKVLAEMKDGR-CKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAV 607
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L +L+ Y K+ + RA L E G +PD
Sbjct: 608 LLKTLVLVYSKSDLLTETERAFLELREQGFSPD 640
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNF------------DGC----------LNVY------ 131
RN+ ID A+++LI Y + G + +GC LNVY
Sbjct: 212 RNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMP 271
Query: 132 --------EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+ MK+ GV P++ TYN L+ + R + +++EM G SP+ TY +
Sbjct: 272 WSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNA 331
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
LL YG++R + + V +EM+ G S+ YN+L++ A G DEA E+ M +
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKK 390
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+PD +T++++++ GK A +F EM AG +PN+ +LI+ +G ++
Sbjct: 391 GIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEM 450
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
++ + PD LL V Q + V V K + G+V
Sbjct: 451 MKVFEEIKICECVPDIVTWNTLLAVFGQNG---MDSEVSGVFKEMKRAGFV 498
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+TLI Y G FD + +Y M GV P++ TYN +L + R Q + + E
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAE 561
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D PN TY SLL AY + E ++ E+ ++ L TL+ + +
Sbjct: 562 MKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDL 621
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
E F +++ + PD T ++M++I R VS+ + N + ++GF P+L
Sbjct: 622 LTETERAFLELR-EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYN 680
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ Y + + + L + G+ PD
Sbjct: 681 SLMYMYSRTEHFEKSEDILREIIAKGMKPD 710
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 3/244 (1%)
Query: 95 YDTRARNEKWRIDPNAF-STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
Y R R + I N+ + +I + G G ++ +++ GV ++ Y +L+
Sbjct: 171 YFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAY 230
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS-VYREMKEKGMQLS 212
R + ++K++ + G P TY +L YG+ ++ + MK G+
Sbjct: 231 ASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPD 290
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ YNTL++ C +EA E+FE+MK++ PD T+++++ + + EA +
Sbjct: 291 LYTYNTLISSCRRGSLYEEAAEVFEEMKAA-GFSPDKVTYNALLDVYGKSRRPREAMEVL 349
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
EM +GF P++ SLI Y + D+ + +++ + GI PD LL+ +T
Sbjct: 350 KEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKT 409
Query: 333 PKEE 336
K++
Sbjct: 410 GKDD 413
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 5/218 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P A TL+ +Y + + E++ G P++ T N ++ GR + +
Sbjct: 602 IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTN 661
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I + D+G +P+ TY SL+ Y R + E + + RE+ KGM+ + +NT++
Sbjct: 662 EILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAY 721
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA IF +MK PD T+++ I + EA + M++ G +PN
Sbjct: 722 CRNGRMKEASRIFAEMKDF-GLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPN 780
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPEL--GITPDD 319
SLI + K R D+ ++ L L +T D+
Sbjct: 781 QNTYNSLIDWFCKLNRRDEASSFISNLRNLDPSVTKDE 818
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + + D + ++ +YG + +K G P++ TYN+L+ R +
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHF 692
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + I +E+ G+ P+ ++ +++ AY R ++ ++ EMK+ G+ V YNT
Sbjct: 693 EKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTF 752
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+A A EA ++ + M + C+P+ T++S+I
Sbjct: 753 IASYASDSMFIEAIDVVKYMIKN-GCKPNQNTYNSLI 788
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 210/494 (42%), Gaps = 81/494 (16%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI+ Y AGN G V+++M+ G P++ TY+ LL G QV++++
Sbjct: 257 DIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLF 316
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M D P TY SL++ +G Y +++++++ +M + G++ Y+ LL++C
Sbjct: 317 SDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRG 376
Query: 227 GYTDEAFEIFEDMKSSENC----------------------------------QPDSWTF 252
G T EA +I + M ++E+ P +
Sbjct: 377 GLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAY 436
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++I + G EA + M +AGF+ + + S+++ Y K D+ + + L +
Sbjct: 437 DALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQ 496
Query: 313 L-GITPDDRFCGCLLNV-----MTQTPKEEL----------GKLVECVEKS----NSKLG 352
G D+R LL V + + KEE G V C+ S SK
Sbjct: 497 KEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWD 556
Query: 353 YVVKLLLE-------EQDIEG--------DFKKEATEL-FNSIS-KDVKKA--YCNCLID 393
Y +LL E Q + G DF + E F+ + +D++++ + N L++
Sbjct: 557 YATQLLDEMIAAGGLHQVVVGIVRGTYDADFSWQVVEYAFDGLKLRDMEESMDFYNALVE 616
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
L V N A ++L + + + ++ WS+++ +S GA +TAL W NDL +
Sbjct: 617 LLVYCNQKARAARVLADAMQRGAFPEAFIKTRRVWSVNVHRMSAGATVTALSTWFNDLQE 676
Query: 454 ALESGEEFPPLLGINTGHG----KHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTT 509
E+ P + I G K D +A V ++ LK AP + G +
Sbjct: 677 C----EKLPFMTSIVVSCGDIEDHRKVEDLPVAKVVQAFLKHYAAPLETASWNEGRIVCK 732
Query: 510 EAAAKSWLESRSSL 523
A K WL S S
Sbjct: 733 GEALKPWLSSMPSF 746
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 123/240 (51%), Gaps = 4/240 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNN 148
E S AR +K +++PN ++T++ G +++G LN++ +M+ G++P++ITYN
Sbjct: 134 EASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNT 193
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
LL Q ++K M ++G+ + TY SL+ + + + REM+++G
Sbjct: 194 LLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEG 253
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ YN+L+ AD G A +F+ M+ C PD T+S+++ I +G +
Sbjct: 254 NPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRG-GCAPDVETYSTLLRIYGNQGCFEQV 312
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
++F++M + P + SLIQ +G+ + + + + + G+ PDD LL+V
Sbjct: 313 RSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSV 372
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 36/256 (14%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
+ R+E + D ++TL+ + G + V++ M GV + +TY +L+DT +
Sbjct: 177 AQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGS 236
Query: 157 KRPWQVKTIYKEMTD-----------------------------------NGLSPNWNTY 181
+ +V+ + +EM D G +P+ TY
Sbjct: 237 NQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETY 296
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
++LLR YG E S++ +MK+ +V YN+L+ + + GY E+ +F DM
Sbjct: 297 STLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVD 356
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
S +PD T+S+++++C G EA + ML P+L LI YGK
Sbjct: 357 S-GVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYK 415
Query: 302 DVVRALNRLPELGITP 317
D + + R+ E G+ P
Sbjct: 416 DALVSYYRIREAGLDP 431
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 7/212 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
FS + + + ++ L +++ M + KP Y ++ MGR + I+++M
Sbjct: 49 FSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDM 108
Query: 170 TDNGLSPNWNTYA--SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
+N + WN YA +L+ AYGR E +L + MK++ ++ ++ YNT+L C+ G
Sbjct: 109 PENDV--KWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGG 166
Query: 228 YTDEA-FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
E +F M+ E QPD T++++++ CS RG V +A +F M E+G +
Sbjct: 167 LDWEGLLNLFAQMR-HEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVT 225
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ + + + V L + + G PD
Sbjct: 226 YKSLVDTFAGSNQLGRVEELLREMEDEGNPPD 257
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI ++ V+EEMKA G P+ +TYN LLD G+++RP + +
Sbjct: 290 DLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVL 349
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM +G +P+ TY SL+ AY R ++ + + +M +KG++ V Y TLL+
Sbjct: 350 KEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKT 409
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSM-------------------ITICSC------ 261
G D A ++FE+M+ + CQP+ TF+++ I IC C
Sbjct: 410 GKDDYAMKVFEEMRVA-GCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVT 468
Query: 262 ----------RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
G SE +F EM AGF P +LI Y + D + R+
Sbjct: 469 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRML 528
Query: 312 ELGITPD 318
+ G+TPD
Sbjct: 529 DAGVTPD 535
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LIK++G GNF + V+EE+K P+++T+N LL G+ +V +
Sbjct: 429 PNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGV 488
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM G P +T+ +L+ AY R + + +++YR M + G+ ++ YN +LA A
Sbjct: 489 FKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALAR 548
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +++ ++ +MK C+P+ T+ S++ + +V A+ E+ EP
Sbjct: 549 GGLWEQSEKVLAEMKDGR-CKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAV 607
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L +L+ Y K+ + RA L E G +PD
Sbjct: 608 LLKTLVLVYSKSDLLTETERAFLELREQGFSPD 640
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNF------------DGC----------LNVY------ 131
RN+ ID A+++LI Y + G + +GC LNVY
Sbjct: 212 RNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMP 271
Query: 132 --------EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+ MK+ GV P++ TYN L+ + R + +++EM G SP+ TY +
Sbjct: 272 WSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNA 331
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
LL YG++R + + V +EM+ G S+ YN+L++ A G DEA E+ M +
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKK 390
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+PD +T++++++ GK A +F EM AG +PN+ +LI+ +G ++
Sbjct: 391 GIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEM 450
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
++ + PD LL V Q + V V K + G+V
Sbjct: 451 MKVFEEIKICECVPDIVTWNTLLAVFGQNG---MDSEVSGVFKEMKRAGFV 498
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+TLI Y G FD + +Y M GV P++ TYN +L + R Q + + E
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAE 561
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D PN TY SLL AY + E ++ E+ ++ L TL+ + +
Sbjct: 562 MKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDL 621
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
E F +++ + PD T ++M++I R VS+ + N + ++GF P+L
Sbjct: 622 LTETERAFLELR-EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYN 680
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ Y + + + L + G+ PD
Sbjct: 681 SLMYMYSRTEHFEKSEDILREIIAKGMKPD 710
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 3/244 (1%)
Query: 95 YDTRARNEKWRIDPNAF-STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
Y R R + I N+ + +I + G G ++ +++ GV ++ Y +L+
Sbjct: 171 YFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAY 230
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS-VYREMKEKGMQLS 212
R + ++K++ + G P TY +L YG+ ++ + MK G+
Sbjct: 231 ASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPD 290
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ YNTL++ C +EA E+FE+MK++ PD T+++++ + + EA +
Sbjct: 291 LYTYNTLISSCRRGSLYEEAAEVFEEMKAA-GFSPDKVTYNALLDVYGKSRRPREAMEVL 349
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
EM +GF P++ SLI Y + D+ + +++ + GI PD LL+ +T
Sbjct: 350 KEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKT 409
Query: 333 PKEE 336
K++
Sbjct: 410 GKDD 413
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 5/218 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P A TL+ +Y + + E++ G P++ T N ++ GR + +
Sbjct: 602 IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTN 661
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I + D+G +P+ TY SL+ Y R + E + + RE+ KGM+ + +NT++
Sbjct: 662 EILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAY 721
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA IF +MK PD T+++ I + EA + M++ +PN
Sbjct: 722 CRNGRMKEASRIFAEMKDF-GLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPN 780
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPEL--GITPDD 319
SLI + K R D+ ++ L L +T D+
Sbjct: 781 QNTYNSLIDWFCKLNRRDEANSFISNLRNLDPSVTKDE 818
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + + D + ++ +YG + +K G P++ TYN+L+ R +
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHF 692
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + I +E+ G+ P+ ++ +++ AY R ++ ++ EMK+ G+ V YNT
Sbjct: 693 EKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTF 752
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+A A EA ++ + M +E C+P+ T++S+I
Sbjct: 753 IASYASDSMFIEAIDVVKYMIKNE-CKPNQNTYNSLI 788
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 4/285 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KWR P+A ++ LI +G AG + +N+ ++M + P+ TYNNL++ G +
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 248
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L AY R LS + MK ++ T N +
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +G +A +IF MK + C PD TF+++I + S G++ + FN ML
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EEL 337
G +PN+ +LI Y + N + + G PD LLN ++ K E+
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428
Query: 338 GKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
K+ E + +++ K V L + EA E+ + + ++
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERN 473
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 36/260 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++L+ YG +G + + V+E M+ KPN+++YN L+D G + I
Sbjct: 408 DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEIL 467
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM NG+ PN + +LL A GR SV + +G++L+ T YN+ + V
Sbjct: 468 HEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSV 527
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC--------------------------- 259
G D+A ++ M++ + +PD T++ +I+ C
Sbjct: 528 GEYDKALSLYRAMRTKK-VKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEV 586
Query: 260 --------SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
S +G+V+EAE+MF +M G P++ T++I Y A+ + +
Sbjct: 587 YSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEME 646
Query: 312 ELGITPDDRFCGCLLNVMTQ 331
+ PD C L+ +
Sbjct: 647 TDDVQPDSIACSSLMRAFNK 666
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+T+I LY G + C + M A G+KPN+++YN L+ + +++
Sbjct: 338 DVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVF 397
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ NG P+ +Y SLL AYG++ E + V+ M+ + ++ YN L+
Sbjct: 398 NEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSK 457
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA EI +M+ + QP+ + +++ C G+ + +++ + G + N
Sbjct: 458 GLLTEAVEILHEMERN-GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTA 516
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVECV 344
S I Y D + + + PD L++ + K E LG L E +
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 345 E 345
+
Sbjct: 577 D 577
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K+K KS + A +++ A+++ I Y + G +D L++Y M+ VKP+ +TY
Sbjct: 493 GQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTY 552
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+ + + YGE L EM +
Sbjct: 553 NVLISGCCKMSK----------------------------------YGE-ALGFLDEMMD 577
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+ LS +Y++++ + G EA +F MK C+PD T+++MI
Sbjct: 578 LKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMV-GCRPDVITYTAMIHAYDVAENWE 636
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+A A+F EM +P+ +SL++ + K + V+
Sbjct: 637 KASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVL 674
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S++I Y G +++ +MK +G +P++ITY ++ A+ + ++ EM
Sbjct: 586 VYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEM 645
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + P+ +SL+RA+ + L + M+EK + + + + +++ C+ +
Sbjct: 646 ETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREW 705
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
E + + M+ S + + ++ GK+ +F +++ +G E N + +
Sbjct: 706 REIIGLIKLMEPSISVVSIG-LLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSI 764
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITP 317
L++ A + L + E G+ P
Sbjct: 765 LLKNLLAAGNWRKYIEVLQWMEEAGLQP 792
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++ +I Y A N++ ++ EM+ V+P+ I ++L+ + +P +V
Sbjct: 616 RPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLV 675
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ + M + + N +++ ++ A R + + + + M+ +S+ L N LL
Sbjct: 676 LAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLG 735
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + ++F + +S + + +T+S ++ G + + M EAG +P++
Sbjct: 736 KSGKIETMMKLFYKIVAS-GAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSV 794
Query: 285 FVLTSL 290
+ S+
Sbjct: 795 GMYRSI 800
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 4/285 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KWR P+A ++ LI +G AG + +N+ ++M + P+ TYNNL++ G +
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 248
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L AY R LS + MK ++ T N +
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +G +A +IF MK + C PD TF+++I + S G++ + FN ML
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EEL 337
G +PN+ +LI Y + N + + G PD LLN ++ K E+
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428
Query: 338 GKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
K+ E + +++ K V L + EA E+ + + ++
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERN 473
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 36/260 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++L+ YG +G + + V+E M+ KPN+++YN L+D G + I
Sbjct: 408 DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEIL 467
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM NG+ PN + +LL A GR SV + +G++L+ T YN+ + V
Sbjct: 468 HEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSV 527
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC--------------------------- 259
G D+A ++ M++ + +PD T++ +I+ C
Sbjct: 528 GEYDKALSLYRAMRTKK-VKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEV 586
Query: 260 --------SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
S +G+V+EAE+MF +M G P++ T++I Y A+ + +
Sbjct: 587 YSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEME 646
Query: 312 ELGITPDDRFCGCLLNVMTQ 331
+ PD C L+ +
Sbjct: 647 TDDVQPDSIACSSLMRAFNK 666
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+T+I LY G + C + M A G+KPN+++YN L+ + +++
Sbjct: 338 DVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVF 397
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ NG P+ +Y SLL AYG++ E + V+ M+ + ++ YN L+
Sbjct: 398 NEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSK 457
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA EI +M+ + QP+ + +++ C G+ + +++ + G + N
Sbjct: 458 GLLTEAVEILHEMERN-GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTA 516
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVECV 344
S I Y D + + + PD L++ + K E LG L E +
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 345 E 345
+
Sbjct: 577 D 577
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K+K KS + A +++ A+++ I Y + G +D L++Y M+ VKP+ +TY
Sbjct: 493 GQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTY 552
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+ + ++YGE L EM +
Sbjct: 553 NVLISGCCKM----------------------------------SKYGE-ALGFLDEMMD 577
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+ LS +Y++++ + G EA +F MK C+PD T+++MI
Sbjct: 578 LKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMV-GCRPDVITYTAMIHAYDVAENWE 636
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+A A+F EM +P+ +SL++ + K + V+
Sbjct: 637 KASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVL 674
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S++I Y G +++ +MK +G +P++ITY ++ A+ + ++ EM
Sbjct: 586 VYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEM 645
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + P+ +SL+RA+ + L + M+EK + + + + +++ C+ +
Sbjct: 646 ETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREW 705
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
E + + M+ S + + ++ GK+ +F +++ +G E N + +
Sbjct: 706 REIIGLIKLMEPSISVVSIG-LLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSI 764
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITP 317
L++ A + L + E G+ P
Sbjct: 765 LLKNLLAAGNWRKYIEVLQWMEEAGLQP 792
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++ +I Y A N++ ++ EM+ V+P+ I ++L+ + +P +V
Sbjct: 616 RPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLV 675
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ + M + + N +++ ++ A R + + + + M+ +S+ L N LL
Sbjct: 676 LAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLG 735
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + ++F + +S + + +T+S ++ G + + M EAG +P++
Sbjct: 736 KSGKIETMMKLFYKIVAS-GAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSV 794
Query: 285 FVLTSL 290
+ S+
Sbjct: 795 GMYRSI 800
>gi|356567150|ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 875
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 206/465 (44%), Gaps = 62/465 (13%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+D +++TL+ LY G F+ + ++EM+ G+K +++TYN L++ GR + +V+
Sbjct: 398 RLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVRK 457
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC 223
++ EM + PN TY++L++ Y + R + + VYRE+K++GM+ V Y+ L+ A+C
Sbjct: 458 LFDEMKARRIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDALC 517
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG---F 280
+ G + + + D+ + + +P+ T++S+I ++ E + +A
Sbjct: 518 KN-GLIESSLRLL-DVMTEKGSRPNVVTYNSIIDAFRIGQQLPALECAVDTSFQANEHQI 575
Query: 281 EP-----------------NLFVLTSLIQCYG---------KAQRTDD--VVRALNRLPE 312
+P N ++ L Q K R D +V+ ++ E
Sbjct: 576 KPSSSRLSAGNFQDQKTGNNDEIMKMLEQLAAEKAGLMKKDKRSRQDSFYLVQIFQKMQE 635
Query: 313 LGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKE 371
+ I P+ +LN + ++ KL++ + +S + V LL +G +
Sbjct: 636 MEIKPNVVTFSAILNACSCCETFQDASKLLDALCMFDSHVYGVAHGLLMGHG-QG-LWNQ 693
Query: 372 ATELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYT-DIQSRSPTQ 427
A LF+ + A+ N L D+ L G L T I+ R+
Sbjct: 694 AQTLFDELEHLDSSTASAFYNALTDM------------LWHFGQKLGAQTVVIEGRNRNV 741
Query: 428 WS-------LHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK--YSD 478
W L L S GAA +H W+ +L + G++ PP+L I TG GKH +
Sbjct: 742 WKGGWSTECLDLHLTSCGAACAMVHTWLLELRTTVFGGQKPPPILSILTGWGKHSKVVGN 801
Query: 479 KGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSSL 523
L E+ L + APF S +G F + +WL S+L
Sbjct: 802 GTLRKAVEALLNGIGAPFQISECNLGRFKSEGPEVTAWLRQPSTL 846
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR-PWQVKTI 165
D +++L+K G + C ++ EM+ G+ ++ TYN +D + + R I
Sbjct: 294 DRLTYNSLLKTCVAKGRWQLCRDLLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAI 353
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM + PN TY++L+ Y +A ED L++Y EMK ++L YNTL+ + A+
Sbjct: 354 DVEMPAKNILPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYAN 413
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G+ +EA F++M+ + D T++++I K E +F+EM PN
Sbjct: 414 LGWFEEAVGKFKEMECC-GIKNDVVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPNDL 472
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++LI+ Y K + + + L + G+ D F L++ +
Sbjct: 473 TYSTLIKIYTKGRMYAEAMDVYRELKQEGMKTDVVFYSALIDAL 516
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 154/353 (43%), Gaps = 77/353 (21%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
+RN + +FS +I G F +++ M G++PN++TYN ++D + +
Sbjct: 215 SRNRGYGNTVYSFSAMISALGRNDCFSEAVSLLRSMGNFGLEPNLVTYNAIIDAGAKGEL 274
Query: 159 PWQVKTIY-KEMTDNGLSPNWNTYASLLR---AYGRARYGEDTLSVYREMKEKGMQLSVT 214
P+++ + +EM G P+ TY SLL+ A GR + D L+ EM+ KG+ V
Sbjct: 275 PFEIVVKFLEEMIAAGCLPDRLTYNSLLKTCVAKGRWQLCRDLLA---EMEWKGIGRDVY 331
Query: 215 LYNTLL-AMC-----------ADV-------------------GYT-----DEAFEIFED 238
YNT + A+C DV GY+ ++A I+++
Sbjct: 332 TYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYSTLMAGYSKAERFEDALNIYDE 391
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
MK + D ++++++ + + G EA F EM G + ++ +LI+ YG+
Sbjct: 392 MKHLL-IRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNALIEGYGRHN 450
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLL 358
+ +V + + + I P+D L+ + T+ ++
Sbjct: 451 KYVEVRKLFDEMKARRIYPNDLTYSTLIKIYTKG-----------------------RMY 487
Query: 359 LEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID-LCVNLNLLENACKLLEL 410
E D+ + K+E + DV + + LID LC N L+E++ +LL++
Sbjct: 488 AEAMDVYRELKQEG------MKTDV--VFYSALIDALCKN-GLIESSLRLLDV 531
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 107/248 (43%), Gaps = 7/248 (2%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
S +I+ G + LN++EE + G + +++ ++ +GR + ++ + M +
Sbjct: 193 SNMIRTLGRLKKIELALNLFEESRNRGYGNTVYSFSAMISALGRNDCFSEAVSLLRSMGN 252
Query: 172 NGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL PN TY +++ A + E + EM G YN+LL C G
Sbjct: 253 FGLEPNLVTYNAIIDAGAKGELPFEIVVKFLEEMIAAGCLPDRLTYNSLLKTCVAKGRWQ 312
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA-EAMFNEMLEAGFEPNLFVLTS 289
++ +M+ + D +T+++ + G++ A A+ EM PN+ ++
Sbjct: 313 LCRDLLAEME-WKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYST 371
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELGKL--VECVE 345
L+ Y KA+R +D + + + L I D L+ + +E +GK +EC
Sbjct: 372 LMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCG 431
Query: 346 KSNSKLGY 353
N + Y
Sbjct: 432 IKNDVVTY 439
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 10/286 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + +I +Y AGN+D V+ M GV + +TYN+L+ K +V IY
Sbjct: 246 DQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFETNYK---EVSKIY 302
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +G+ P+ +YA L++AYGRAR E+ LSV+ EM + G++ + YN LL A
Sbjct: 303 DQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 362
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +F+ M+ + PD W++++M++ + AE F + GFEPN+
Sbjct: 363 GMVEQAKTVFKSMRR-DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELG---KLV 341
++I+ Y KA + ++ ++ GI + +++ + LG ++
Sbjct: 422 YGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKDFGSALGWYKEME 481
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAY 387
C + K V+ L QD E D KE T L N + V + Y
Sbjct: 482 SCGVPPDQKAKNVLLSLYSTQD-ELDEAKELTGLRNETATIVARVY 526
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F LI YG GNF+G V + +G PN+I+Y L+++ GR + +
Sbjct: 135 WNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAE 194
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
I++ M +G P+ TY +L+ + + + E+ + K+ ++ +Y+ ++
Sbjct: 195 AIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
M G D+A ++F M + + T++S+++ + +VS+ ++++M +G
Sbjct: 255 YMYKKAGNYDKARKVFSSM-VGKGVPQSTVTYNSLMSFETNYKEVSK---IYDQMQRSGI 310
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+P++ LI+ YG+A+R ++ + + + G+ P + LL+ + E K
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 370
Query: 341 V 341
V
Sbjct: 371 V 371
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 10/234 (4%)
Query: 74 PKSYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLN 129
P+S + N + KE K YD R+ I P+ +++ LIK YG A + L+
Sbjct: 279 PQSTVTYNSLMSFETNYKEVSKIYDQMQRSG---IQPDVVSYALLIKAYGRARREEEALS 335
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+EEM GV+P YN LLD + Q KT++K M + + P+ +Y ++L AY
Sbjct: 336 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYV 395
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
A E ++ +K G + ++ Y T++ A ++ E++E M+ S +
Sbjct: 396 NASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLS--GIKAN 453
Query: 250 WTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
T + I S R K A + EM G P+ L+ Y D+
Sbjct: 454 QTILTTIMDASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSLYSTQDELDE 507
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
RI P+ +++T++ Y A + +G ++ +K G +PN++TY ++ +A ++
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKM 438
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+Y++M +G+ N +++ A GR + L Y+EM+ G+ N LL++
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIMDASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSL 498
Query: 223 CADVGYTDEAFEI 235
+ DEA E+
Sbjct: 499 YSTQDELDEAKEL 511
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 3/215 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P+A++ TLI V+EEMKA G + +TYN LLD G++ RP +
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM NG SP+ TY SL+ AY R ++ + + +M EKG + V Y TLL+
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + A IFE+M+++ C+P+ TF++ I + RGK +E +F+E+ G P+
Sbjct: 395 ERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +L+ +G+ +V + G P+
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 71 GSSPKSYIWVNPKS--PRASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G+ P + + S RA K++ S RN + + F+ IK+YG G F
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ +++E+ G+ P+++T+N LL G+ +V ++KEM G P T+ +L+ A
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y R E ++VYR M + G+ ++ YNT+LA A G +++ ++ +M+ C+P
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR-CKP 557
Query: 248 DSWTFSS-----------------------------------MITICSCRGKVSEAEAMF 272
+ T+ S ++ +CS + EAE F
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+E+ E GF P++ L S++ YG+ Q L+ + E G TP
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 125/245 (51%), Gaps = 5/245 (2%)
Query: 111 FSTLIKLYGTAGN-FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ ++ ++G G ++ ++ E+MK+ G+ P+ TYN L+ R + +++EM
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G S + TY +LL YG++ ++ + V EM G S+ YN+L++ A G
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
DEA E+ M + + +PD +T++++++ GKV A ++F EM AG +PN+ +
Sbjct: 366 DEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
I+ YG + ++++ + + G++PD LL V Q + V V K
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN---GMDSEVSGVFKEMK 481
Query: 350 KLGYV 354
+ G+V
Sbjct: 482 RAGFV 486
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
++ +G+ R ++ + ++G S + +Y SL+ A+ + + ++V+++M+E G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 209 MQLSVTLYNTLLAMCADVGYT-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
+ ++ YN +L + +G ++ + E MKS + PD++T++++IT C E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS-DGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
A +F EM AGF + +L+ YGK+ R + ++ LN + G +P
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP 347
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Query: 82 PKSPRA-SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
P++ RA S+LKE+ + D ++++ +YG V + MK G
Sbjct: 611 PEAERAFSELKERGFSP---------DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+M TYN+L+ R+ + + I +E+ G+ P+ +Y +++ AY R D +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ EM+ G+ V YNT + A +EA + M C+P+ T++S++
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGCRPNQNTYNSIV 776
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 103/233 (44%), Gaps = 11/233 (4%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+S A E R PN + +L+ Y ++ EE+ + ++P + L
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTL 600
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ + + + + E+ + G SP+ T S++ YGR + V MKE+G
Sbjct: 601 VLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF 660
Query: 210 QLSVTLYNTLLAM---CADVGYTDEAF-EIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
S+ YN+L+ M AD G ++E EI ++ +PD +++++I ++
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREIL-----AKGIKPDIISYNTVIYAYCRNTRM 715
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A +F+EM +G P++ + I Y ++ + + + + G P+
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 70/137 (51%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++L+ ++ + +F + E+ A G+KP++I+YN ++ R R I+ EM
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G+ P+ TY + + +Y E+ + V R M + G + + YN+++ + D
Sbjct: 727 NSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKD 786
Query: 231 EAFEIFEDMKSSENCQP 247
EA ED+++ + P
Sbjct: 787 EAKLFVEDLRNLDPHAP 803
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL-SVYREMKEKGMQL 211
+G+++ P + K + +GLSP +LR+ + L SV E+ E
Sbjct: 78 IGKSRDP----NLGKPWSYHGLSPQGQ---QVLRSLIEPNFDSGQLDSVLSELFEPFKDK 130
Query: 212 SVTLYNTLLAMCADVGYT---DEAFEIFEDMKSSENCQP--DSWTFSSMITICSCRGKVS 266
+ + LLA +G+ D A F+ ++ Q D+ + +I++ G+VS
Sbjct: 131 PESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVS 190
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
A MFN + E GF +++ TSLI + + R + V ++ E G P +L
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 327 NVMTQ--TPKEELGKLVE 342
NV + TP ++ LVE
Sbjct: 251 NVFGKMGTPWNKITSLVE 268
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 210/494 (42%), Gaps = 81/494 (16%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI+ Y AGN G V+++M+ G P++ TY+ LL G QV++++
Sbjct: 257 DIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLF 316
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + P TY SL++ +G Y +++++++ +M + G++ Y+ LL++C
Sbjct: 317 SDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRG 376
Query: 227 GYTDEAFEIFEDMKSSENC----------------------------------QPDSWTF 252
G T EA +I + M ++E+ P +
Sbjct: 377 GLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAY 436
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++I + G EA + M +AGF+ + + S+++ Y K D+ + + L +
Sbjct: 437 DALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQ 496
Query: 313 L-GITPDDRFCGCLLNV-----MTQTPKEEL----------GKLVECVEKS----NSKLG 352
G D+R LL V + + KEE G V C+ S SK
Sbjct: 497 KEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGARVYCLLLSLCVRRSKWD 556
Query: 353 YVVKLLLE-------EQDIEG--------DFKKEATEL-FNSIS-KDVKKA--YCNCLID 393
Y +LL E Q + G DF + E F+ + +D++++ + N L++
Sbjct: 557 YATQLLDEMIAAGGLHQVVVGIVRGTYDADFSWQVVEYAFDGLKLRDMEESMDFYNALVE 616
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
L V N A ++L + + + ++ WS+++ +S GA +TAL W NDL +
Sbjct: 617 LLVYCNQKARAARVLADAMQRGAFPEAFIKTRRVWSVNVHRMSAGATVTALSTWFNDLQE 676
Query: 454 ALESGEEFPPLLGINTGHG----KHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTT 509
E+ P + I G K D +A V ++ LK AP + G +
Sbjct: 677 C----EKLPFMTSIVVSCGDIEDHRKVEDLPVAKVVQAFLKHYAAPLETASWNEGRIVCK 732
Query: 510 EAAAKSWLESRSSL 523
A K WL S S
Sbjct: 733 GEALKPWLSSMPSF 746
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%), Gaps = 4/240 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNN 148
E S AR +K R++PN ++T++ G +++G LN++ +M+ G++P++ITYN
Sbjct: 134 EASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNT 193
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
LL Q ++K M ++G+ + TY SL+ + + + REM+++G
Sbjct: 194 LLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEG 253
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ YN+L+ AD G A +F+ M+ C PD T+S+++ I +G +
Sbjct: 254 NSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRG-GCAPDVETYSTLLRIYGNQGCFEQV 312
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
++F++M E P + SLIQ +G+ + + + + + G+ PDD LL+V
Sbjct: 313 RSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSV 372
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
FS + + + ++ L +++ M + KP Y ++ MGR + I+++M
Sbjct: 49 FSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDM 108
Query: 170 TDNGLSPNWNTYA--SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
+N + WN YA +L+ AYGR E +L + MK++ ++ ++ YNT+L C+ G
Sbjct: 109 PENDV--KWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGG 166
Query: 228 YTDEA-FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
E +F M+ E QPD T++++++ CS RG V +A +F M E+G +
Sbjct: 167 LDWEGLLNLFAQMR-HEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVT 225
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ + + + V L + + G +PD
Sbjct: 226 YKSLVDTFAGSNQLGRVEELLREMEDEGNSPD 257
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R R D ++TLI N + + V+ +M++ +P++ TYN ++ GR R
Sbjct: 312 VRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCAR 371
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++KE+ G P+ TY SLL A+ R E + EM ++G YNT
Sbjct: 372 ARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNT 431
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M G D+A +I+ DMKSS PD+ T++ +I KV EA + +EML+A
Sbjct: 432 IIHMYGKQGRHDQAMQIYRDMKSSGR-NPDAVTYTVLIDSLGKASKVEEAANVMSEMLDA 490
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +P L ++LI Y KA + ++ N + GI PD
Sbjct: 491 GVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPD 530
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 172/409 (42%), Gaps = 17/409 (4%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
++++KLY +F +Y++++ +KP+ TYN L+ R +RP + ++ +M
Sbjct: 953 NSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRS 1012
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
GL P +TY SL+ A+ + R E ++ E++ G +L Y+ ++ G +
Sbjct: 1013 LGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRK 1072
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A + MK S +P T ++ G+ EAE + + G + +S+I
Sbjct: 1073 AENLLAIMKES-GIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVI 1131
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP-KEELGKLVECVEKSNSK 350
Y K + L + E GI PD R C + T + E L+ ++ +
Sbjct: 1132 DAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAGFD 1191
Query: 351 LGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLEL 410
L ++LL E+ + + E + + N L+DL L A + +L
Sbjct: 1192 LP--IRLLKEKSESLVSEVDQCLERLEPVEDNAAFNLVNALVDLLWAFELRATASWVFQL 1249
Query: 411 GLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINT 469
+ +Y DI + W + LS G+AL A +L+ E P + + T
Sbjct: 1250 AIKRSIYRHDIFRVADKDWGADFRKLSAGSALDA----------SLQGYPESPKSVVLIT 1299
Query: 470 GHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
G +Y+ L S ++ L E+ +PF + G + + + WL+
Sbjct: 1300 GTA--EYNMVSLDSTLKACLWEMGSPFLPCKTRQGILVAKAHSLRMWLK 1346
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 37/212 (17%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I +YG G D + +Y +MK+ G P+ +TY L+D++G+A + + +
Sbjct: 425 DEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVM 484
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D G+ P +TY++L+ AY +A
Sbjct: 485 SEMLDAGVKPTLHTYSALICAYAKA----------------------------------- 509
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA E F M+ S +PD +S M+ ++ +A +++EM+ GF P+ +
Sbjct: 510 GKREEAEETFNCMRRS-GIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGL 568
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPEL-GITP 317
++ + D V R + + EL G+ P
Sbjct: 569 YEVMMHALVRENMWDVVDRIIRDMEELSGMNP 600
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V +E++ +G+K + + L+ +A ++V+ IY M G P + Y +LR
Sbjct: 866 VIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLC 925
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ + D ++ EM+E G Q + + N++L + + I++ ++ + + +PD
Sbjct: 926 KCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDA-SLKPDE 984
Query: 250 WTFSSMITICSCRGKV-SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T++++I I CR + E ++ N+M G EP L SLI + K + +
Sbjct: 985 ETYNTLI-IMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFE 1043
Query: 309 RLPELGITPDDRFCGCLL 326
L G D F ++
Sbjct: 1044 ELRSNGYKLDRAFYHLMM 1061
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ +++D + ++K Y T+G+ N+ MK G++P + T + L+ + G++ +P
Sbjct: 1046 RSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQP 1105
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + + K + G+ + Y+S++ AY G + G + L+ EMKE G++ ++
Sbjct: 1106 EEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLT---EMKEAGIEPDHRIW 1162
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQP------DSWTFSSMITICSCRGKVSEAEA 270
+ T+EA + ++ + P S + S + C R + E A
Sbjct: 1163 TCFIRAATLSEGTNEAIVLLNALQDAGFDLPIRLLKEKSESLVSEVDQCLERLEPVEDNA 1222
Query: 271 MFN 273
FN
Sbjct: 1223 AFN 1225
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/241 (19%), Positives = 89/241 (36%), Gaps = 36/241 (14%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG--LSPNWNTY 181
FD ++ +M+ GV+ + Y ++ R P + NG L + + Y
Sbjct: 718 FDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVY 777
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-K 240
++ YG+ + + S+ ++++ ++ ++N L+ A G + A IF M +
Sbjct: 778 IDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMR 837
Query: 241 SSENCQPDSWTFSSMITICSCR---------------------------------GKVSE 267
+ DS I R G + E
Sbjct: 838 DGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFE 897
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ ++N M AG+ P + V +++ K +R DV L + E G PD + C +L
Sbjct: 898 VQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILK 957
Query: 328 V 328
+
Sbjct: 958 L 958
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 1/235 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ +YG AG ++ NV +EM++ G PN++TYN LL GRA +
Sbjct: 222 DRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMK 281
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ P+ TY SLL AY RA E + +Y +M+ + +N L+ M
Sbjct: 282 DSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKN 341
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
E IFEDM++ +PD T++S++ G SE +F M +AGFEP+
Sbjct: 342 KNFSEMMVIFEDMQAC-GVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKAT 400
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
LI+ YG+ +D + + + + G TPD LL + + + E +L+
Sbjct: 401 FNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELI 455
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 37/244 (15%)
Query: 111 FSTLIKLYGTAG-NFDGCLNVYEEMKAIGVK----------------------------- 140
++ +I LYG G +++ L ++EEMKA G++
Sbjct: 155 YNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQM 214
Query: 141 ------PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
P+ +TYN LLD G+A + + KEM G PN TY LL A+GRA
Sbjct: 215 KSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLC 274
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ M KG++ V Y +LL+ + G ++A EI+ M++S NC P+S+TF++
Sbjct: 275 NAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTS-NCTPNSFTFNA 333
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I + SE +F +M G EP++ SL+ +GK +V++ + + G
Sbjct: 334 LIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAG 393
Query: 315 ITPD 318
PD
Sbjct: 394 FEPD 397
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 2/220 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R E + +D A+++LI F L +E+MK G +P+++TYN ++D G+ R
Sbjct: 109 REEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRS 168
Query: 160 WQ-VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
W+ + +++EM G+ P+ TY + + A E+ ++ +MK YN
Sbjct: 169 WENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNA 228
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
LL + G+ +EA + ++M+S+ C P+ T++ +++ G + A M + M+
Sbjct: 229 LLDVYGKAGWYNEAANVLKEMESA-GCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSK 287
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G EP++F TSL+ Y +A + + + N++ TP+
Sbjct: 288 GIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPN 327
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 110/210 (52%), Gaps = 6/210 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P+ F+ +L+ Y AG + + +Y +M+ PN T+N L+ G+ K ++
Sbjct: 289 IEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMM 348
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I+++M G+ P+ T+ SLL A+G+ + L V+R MK+ G + +N L+
Sbjct: 349 VIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAY 408
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +D+A I++ M + C PD TF++++ + G+ AE + +E+ + ++PN
Sbjct: 409 GRCGSSDQALSIYDGMLQA-GCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPN 467
Query: 284 LFVLTSLIQCY---GKAQRTDDVVRALNRL 310
S++ Y G+ ++ ++V L+ +
Sbjct: 468 DIAYASMLHAYANGGELEKLKEMVDTLHTI 497
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 3/208 (1%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMK-AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+++K G G ++ L V+ M+ ++ +P+ +T +L +GR + V ++K + +
Sbjct: 51 SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT-D 230
G + Y SL+ A R R ++ L + +MKE G Q S+ YN ++ + G + +
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E+FE+MK+ + QPD +T+++ IT C+ EA +F +M + P+ +L
Sbjct: 171 NILELFEEMKA-QGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNAL 229
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ YGKA ++ L + G P+
Sbjct: 230 LDVYGKAGWYNEAANVLKEMESAGCLPN 257
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 38/258 (14%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+F+ LI ++G NF + ++E+M+A GV+P+++T+N+LL G+ +V +
Sbjct: 326 PNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKV 385
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M G P+ T+ L+ AYGR + LS+Y M + G + +NTLLA A
Sbjct: 386 FRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAR 445
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK--------------------- 264
G + A I +++ S + +P+ ++SM+ + G+
Sbjct: 446 EGRWEHAELILDELNRS-SYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKI 504
Query: 265 --------------VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
V EAE F M G+ + ++I YGK D L
Sbjct: 505 LLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALL 564
Query: 311 PELGITPDDRFCGCLLNV 328
G+ PD CL+ +
Sbjct: 565 RSTGLEPDVVTYNCLMGM 582
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 126/314 (40%), Gaps = 74/314 (23%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI+ YG G+ D L++Y+ M G P++ T+N LL + R R + I
Sbjct: 397 DKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELIL 456
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGE--------DTL-------------------- 198
E+ + PN YAS+L AY A GE DTL
Sbjct: 457 DELNRSSYKPNDIAYASMLHAY--ANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYS 514
Query: 199 ---------SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE------ 243
+ M+ G + +N +++M G D+A + F ++S+
Sbjct: 515 KCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVV 574
Query: 244 --NC--------------------------QPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
NC PD +++++I S G++S A +F+EM
Sbjct: 575 TYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEM 634
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK- 334
+ G +P+ F + + CY + + + + + G PD+ L++ + K
Sbjct: 635 VSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKF 694
Query: 335 EELGKLVECVEKSN 348
EE+ ++++ ++ S+
Sbjct: 695 EEVERILKFIKSSD 708
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D + F+ +I +YG G D + + +++ G++P+++TYN L+ GR
Sbjct: 530 RHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMY 589
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +E G +P+ +Y +++ +Y + ++ EM G+Q YNT
Sbjct: 590 RKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTF 649
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ + G EA + + M + C+PD T+ +++ GK E E +
Sbjct: 650 VGCYVNGGMFPEALSVVKHMHKT-GCKPDEVTYRTLVDAYCKIGKFEEVERIL 701
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 90 LKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
+ +K+ DT A ++P+ ++ L+ +YG G + C E A G P++++YN
Sbjct: 553 MMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYN 612
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
++ + + + I+ EM NG+ P+ TY + + Y + LSV + M +
Sbjct: 613 TVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKT 672
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
G + Y TL+ +G +E I + +KSS+
Sbjct: 673 GCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSD 708
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 160/344 (46%), Gaps = 37/344 (10%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A + ++ G AG D C+ YE M A ++P ++T++ L+ G +R + ++EM
Sbjct: 96 ACNVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREM 155
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G++P+ SL+ A+ +A + L V+ +M G+ SV +NTL+ C G
Sbjct: 156 LEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDI 215
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D A ++F + S P+ TFS++I + +G+V EA + EM G EPN ++
Sbjct: 216 DRARQVFSRL-SQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSA 274
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
LI G+A + + L+ + GI P NV+T T L++ K
Sbjct: 275 LINACGRAGQLARAFQTLDEMFGTGIEP---------NVVTWT------TLIDACGKGK- 318
Query: 350 KLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
+L + KL E +E + N ++ C+ L+D C+ + L+ A +LE
Sbjct: 319 ELEWSFKLFKE--------MRERGTVPNGVT-------CSALMDACLKADELDLAFAVLE 363
Query: 410 LGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
L + I+ T SL + LG A A I +++L+K
Sbjct: 364 HMLDV----GIEPTEVTYTSLLTQCARLGQADRA-GIVLDELNK 402
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 7/214 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A ++LI + AG+ D L V+++M GV P++IT+N L+D GRA + + ++
Sbjct: 163 DVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVF 222
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ GLSPN T+++L+ ++ ++ S +EM+ +G++ + Y+ L+ C
Sbjct: 223 SRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRA 282
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE---AMFNEMLEAGFEPN 283
G AF+ ++M + +P+ T++++I C GK E E +F EM E G PN
Sbjct: 283 GQLARAFQTLDEMFGT-GIEPNVVTWTTLIDAC---GKGKELEWSFKLFKEMRERGTVPN 338
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++L+ KA D L + ++GI P
Sbjct: 339 GVTCSALMDACLKADELDLAFAVLEHMLDVGIEP 372
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN---NLLDTMGRAKRPW 160
WR++ S L++L+G A D V E M P+ T+ N +DT G +
Sbjct: 538 WRMNRKLESDLLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAV 597
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + +G N TY++LL A GRA+ + + M+E G++ + Y L+
Sbjct: 598 ELMERSR-AEGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRETGVKPTEGTYLALM 656
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+C + A E+FE M+ +E +P +++S++ S
Sbjct: 657 EVCRHSRDSKAAVEVFEAME-TEGVRPGVRSYTSLLKAIS 695
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM----KAIGVKPNMITYNNLLDTMGR 155
R+ R D A++ L+ G FD L V M + G++P+ +TY +L+ R
Sbjct: 886 RSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLIKAAAR 945
Query: 156 AKRPW--QVKTIYKEMTD--NGLS----PNWNTYASLLRA------YGRARYGEDTLSVY 201
A P + + I+ M N S P TYA L+RA YGRA L ++
Sbjct: 946 AVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRA------LEIW 999
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
R+ G+ LA C G D A ++++ M+ +P+S ++ +C
Sbjct: 1000 RQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREG-GIRPNSRALLDLVNLCRA 1058
Query: 262 RGKVSEAEAMFNE 274
G S A + E
Sbjct: 1059 NGLQSVAARIMRE 1071
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDT---MGRAKRPWQ-VKTIYKEMTDNGLSPNWNTYASLL 185
V++EM++ GV+P++ YN L++T +G R V+ + + GL P+ TY SL+
Sbjct: 881 VFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLI 940
Query: 186 RAYGRA---RYGEDTLSVYREMKEKGMQLS-------VTLYNTLLA--MCADVGYTDEAF 233
+A RA R E+ ++ M+++ S VT + + A M D G A
Sbjct: 941 KAAARAVPPRV-EEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYG---RAL 996
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
EI+ S+ P + + + C G V A +++ M E G PN L L+
Sbjct: 997 EIWRQQLSA-GVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLV 1053
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN ++TLI G + +++EM+ G PN +T + L+D +A
Sbjct: 300 IEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLAF 359
Query: 164 TIYKEMTDNGLSPNWNTYASLL 185
+ + M D G+ P TY SLL
Sbjct: 360 AVLEHMLDVGIEPTEVTYTSLL 381
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
++LL G+A + + + M + SP+ T+ LL A A + + + +
Sbjct: 546 SDLLQLFGQADQVDAAFKVLEGMVERRDSPDGETWLLLLNAVDTAGALDKAVELMERSRA 605
Query: 207 KGM--QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+G +++ Y+ LL C AF I + M+ + +P T+ +++ +C
Sbjct: 606 EGHGSEINELTYSALLGACGRAKKLARAFRIVQSMRET-GVKPTEGTYLALMEVCRHSRD 664
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
A +F M G P + TSL++
Sbjct: 665 SKAAVEVFEAMETEGVRPGVRSYTSLLKA 693
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 189/422 (44%), Gaps = 8/422 (1%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+++ D + +++++KLY G+F VY+ ++ G+KP+ TYN L+ R +RP +
Sbjct: 917 RFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEG 976
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ EM GL P +TY SL+ A+G+ + E ++ + K +L + Y+ ++ M
Sbjct: 977 LSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKM 1036
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ G +A ++ MK + +P T ++ S G+ EAE + + + G
Sbjct: 1037 FRNSGNHSKAEKLLGVMKEA-GVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPL 1095
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV--MTQTPKEELGKL 340
+ +S+I Y K + ++ L + + G+ PD R C + ++Q E + L
Sbjct: 1096 STLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAI-VL 1154
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNL 400
++ + + L ++LL E+ D E + + + N L DL L
Sbjct: 1155 LKALRDTGFDLP--IRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALEDLLWAFEL 1212
Query: 401 LENACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGE 459
A + +L + +Y D+ + W + +S G+AL L +W++ + A G
Sbjct: 1213 RATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQDASLQGY 1272
Query: 460 EFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLES 519
P + G +Y+ L S ++ L E+ +PF + G + + + WL+
Sbjct: 1273 PLSP-KSVVLITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKD 1331
Query: 520 RS 521
S
Sbjct: 1332 SS 1333
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI N + + VY +M A +P++ TYN ++ GR + ++
Sbjct: 293 DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLF 352
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K++ G P+ TY SLL A+ R + + +M + G YNT++ M
Sbjct: 353 KDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKR 412
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D AF+++ DMK S PD+ T++ +I + EA + +EML A +P L
Sbjct: 413 GQHDLAFQLYSDMKLSGR-SPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRT 471
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++LI Y KA + + + + GI PD +L+++ +
Sbjct: 472 FSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 516
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 9/296 (3%)
Query: 68 GKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNF--D 125
G T + + V ++ R +K++E R+R D +F+TLI +G +
Sbjct: 219 GNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRG--CEPDLVSFNTLINARLKSGTMVTN 276
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + E++ G++P++ITYN L+ R + +Y +M + P+ TY +++
Sbjct: 277 LAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMI 336
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
YGR + ++++++ KG YN+LL A G D+ EI EDM
Sbjct: 337 SVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKM-GF 395
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
D T++++I + RG+ A ++++M +G P+ T LI GKA +
Sbjct: 396 GKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAE 455
Query: 306 ALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGKLVECVEKSNSK---LGYVVKL 357
++ + + P R F + + E + +C+ +S K L Y V L
Sbjct: 456 VMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVML 511
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+ + GN D + E+M +G + +TYN ++ G+ + +Y
Sbjct: 363 DAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLY 422
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +G SP+ TY L+ + G+A ++ V EM ++ ++ ++ L+ A
Sbjct: 423 SDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKA 482
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA E F+ M S +PD +S M+ I + +A ++ EM+ F+P+ +
Sbjct: 483 GKRVEAEETFDCMLRS-GIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHAL 541
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+++ GK R +DV + + + EL C L+
Sbjct: 542 YEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILV 581
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
++ + L++ G D V +E++ +G K + + +LD A ++VK IY+
Sbjct: 818 DSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQG 877
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G P + Y ++ + + D ++ EM+ + ++++N++L + +G
Sbjct: 878 MKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGD 937
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ ++++ ++ + +PD T++++I + + E ++ +EM G EP L
Sbjct: 938 FKKTGQVYQLIQEA-GLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYK 996
Query: 289 SLIQCYGKAQRTD 301
SLI +GK Q +
Sbjct: 997 SLISAFGKLQMVE 1009
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LI Y +G ++ ++ M G P + + N L+ + R ++ +
Sbjct: 780 VDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVV 839
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+E+ D G + ++ +L A+ A + +Y+ MK G ++ LY ++ + A
Sbjct: 840 IQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAK 899
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ + +M+ + +PD ++S++ + + G + ++ + EAG +P+
Sbjct: 900 GKRVRDVEAMVSEMEVA-RFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDED 958
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+LI Y + +R ++ + ++ + +G+ P
Sbjct: 959 TYNTLILMYCRDRRPEEGLSLMHEMRRVGLEP 990
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 166/384 (43%), Gaps = 20/384 (5%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+A ++ LI+++G G F + ++ +M V+PNM TY L+ G+ K
Sbjct: 379 DPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKK 438
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I M + G+ P+ Y ++ A+G+A E+ L V+ M E G +V YN+ + A
Sbjct: 439 ILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFA 498
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA I M S + D +F+ +I G+ EA + EM +A EPN
Sbjct: 499 RGGLYKEAEAILSRMNES-GLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNE 557
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM---TQTPKEELGKLV 341
L ++ Y A D+ + GI P C CL+ + + +
Sbjct: 558 LTLEVVLSVYCSAGLVDESEEQFQEIKASGILP-SVMCYCLMLALYAKNDRLNDAYNLID 616
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT--------ELFNSISKDVKKAYCNCLID 393
E + S + + Q I+GDF E+ + NS + + N L++
Sbjct: 617 EMITMRVSDIHQGIG-----QMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLE 671
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
+ E A ++L ++ ++ +S WS+ + +S G ALTAL +W+N++ +
Sbjct: 672 ALWWMFQRERAARVLNEASKRGLFPELFRKSKLVWSVDVHRMSEGGALTALSVWLNNMHE 731
Query: 454 ALESGEEFPPLLGINTGHGKHKYS 477
+G + P L + G + S
Sbjct: 732 MSRTGNDLPELATVVVVRGHMEKS 755
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 115/217 (52%), Gaps = 4/217 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
R+ P+ ++T+I G +++G L ++ EM+ G++P++ITYN LL +
Sbjct: 201 RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDE 260
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +++ M ++G+ P+ NTY+ L++ +G+ E + REM+ G +T YN LL
Sbjct: 261 AEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLE 320
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A++G EA ++F M+++ C ++ T+S ++ + G+ + +F EM + +
Sbjct: 321 AYAELGSIKEAMDVFRQMQAA-GCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTD 379
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+ LIQ +G+ +VV + + E + P+
Sbjct: 380 PDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPN 416
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 8/245 (3%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K ++ N F+ + K + G++ L +++ M + I KPN Y ++ +GR +
Sbjct: 95 KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDK 154
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ ++ EM NG++ Y +++ AYGR +L + MK++ + S+ YNT++
Sbjct: 155 CREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVIN 214
Query: 222 MCADVGYTDEA-FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
CA G E +F +M+ E QPD T+++++ C+ RG EAE +F M E+G
Sbjct: 215 ACARGGLDWEGLLGLFAEMR-HEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGI 273
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
P++ + L+Q +GK R + V L + G PD LL ELG +
Sbjct: 274 VPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYA-----ELGSI 328
Query: 341 VECVE 345
E ++
Sbjct: 329 KEAMD 333
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+E + D ++TL+ G D V+ M G+ P++ TY+ L+ T G+ R
Sbjct: 234 RHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRL 293
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+V + +EM G P+ +Y LL AY ++ + V+R+M+ G + Y+ L
Sbjct: 294 EKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVL 353
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L + G D+ +IF +MK S N PD+ T++ +I + G E +F++M+E
Sbjct: 354 LNLYGKHGRYDDVRDIFLEMKVS-NTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEEN 412
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EPN+ LI GK +D + L + E GI P +
Sbjct: 413 VEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSK 453
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 143/319 (44%), Gaps = 6/319 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L++ Y G+ ++V+ +M+A G N TY+ LL+ G+ R V+ I+
Sbjct: 311 DITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIF 370
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + P+ TY L++ +G Y ++ ++++ +M E+ ++ ++ Y L+ C
Sbjct: 371 LEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKG 430
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +I M + + P S ++ +I EA +FN M E G P +
Sbjct: 431 GLYEDAKKILLHM-NEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVET 489
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVECVE 345
S I + + + L+R+ E G+ D F G + EE K +E
Sbjct: 490 YNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEME 549
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI--SKDVKKAYCNCL-IDLCVNLNLLE 402
K+N + + ++ E+ E F I S + C CL + L + L
Sbjct: 550 KANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLN 609
Query: 403 NACKLLELGLTLEVYTDIQ 421
+A L++ +T+ V +DI
Sbjct: 610 DAYNLIDEMITMRV-SDIH 627
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 6/303 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +I L G G D C V++EM + GV + Y +++ GR + + M
Sbjct: 139 YTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMK 198
Query: 171 DNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+SP+ TY +++ A R E L ++ EM+ +G+Q V YNTLL CA G
Sbjct: 199 QERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLG 258
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
DEA +F M S PD T+S ++ ++ + + EM G P++
Sbjct: 259 DEAEMVFRTMNES-GIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNV 317
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
L++ Y + + + ++ G + LLN+ + + +++ + ++ SN
Sbjct: 318 LLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSN 377
Query: 349 SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNC---LIDLCVNLNLLENAC 405
+ +L + EG + KE LF+ + ++ + LI C L E+A
Sbjct: 378 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAK 437
Query: 406 KLL 408
K+L
Sbjct: 438 KIL 440
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 139/285 (48%), Gaps = 4/285 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K R P+A ++ LI +G AG + +N+ ++M + P+ TYNNL++ G +
Sbjct: 177 QKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 236
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MTDNG+ P+ T+ +L A+ LS + +K ++ T +N +
Sbjct: 237 KEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNII 296
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + D+A +IF MK ++ C PD TF+SMI + S G + EA FN ML
Sbjct: 297 IHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAE 356
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ +L+ Y ++ ++ N + + G PD LLN ++ K +
Sbjct: 357 GLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKA 416
Query: 339 K-LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
+ + + ++++N K V L + ++A E+ + +D
Sbjct: 417 REIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQD 461
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 137/323 (42%), Gaps = 76/323 (23%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN------------------- 147
D F+++I LY G+ + C + M A G+KPN+++YN
Sbjct: 326 DVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVF 385
Query: 148 ----------------NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
+LL+ GR+++P + + I+K + N L PN +Y +L+ AYG
Sbjct: 386 NEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSN 445
Query: 192 RYGEDTLSVYREMKE-----------------------------------KGMQLSVTLY 216
ED + + REM++ +G++L+ Y
Sbjct: 446 GLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAY 505
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N+ + +VG D+A +++ M+ + + DS T++ +I+ C K EA + EM+
Sbjct: 506 NSAIGSYINVGEYDKAIDLYNSMRKKK-IKSDSVTYTVLISGCCKMSKFGEALSFMEEMM 564
Query: 277 EAGFEPNLFVLTSLIQCYGK-AQRTDDVVRA---LNRLPELGITPDDRFCGCLLNVMTQT 332
+ V +S+I Y K A ++ A N + LG +PD +L+
Sbjct: 565 HLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAA 624
Query: 333 PK-EELGKLVECVEKSNSKLGYV 354
K E+L L E +E+++ KL +
Sbjct: 625 EKWEKLYALFEEMEENDVKLDTI 647
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 7/232 (3%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ LI YG+ G + + + EM+ + PN+++ LL GR + ++
Sbjct: 428 LKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKID 487
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T+ G+ N Y S + +Y + + +Y M++K ++ Y L++ C
Sbjct: 488 TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGC 547
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI----CSCRGKVSEAEAMFNEMLEAG 279
+ EA E+M + +SS+I S G++ EAE+ FN M G
Sbjct: 548 CKMSKFGEALSFMEEMMHLK-LPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLG 606
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
P++ T+++ Y A++ + + + E + D C L+ +
Sbjct: 607 CSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNK 658
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK++G P+++TY +LD A++ ++ +++EM +N + + A+L+RA+ +
Sbjct: 602 MKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQ 661
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
LS+ + M+EK + LS T++ +++ C + A ++ + M+ S S +
Sbjct: 662 PGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEPSLPV-ISSGCLN 720
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
+ GK+ +F +ML +G E N + L++
Sbjct: 721 LFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLK 759
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 167/379 (44%), Gaps = 20/379 (5%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+A ++ LI+++G G F + ++ +M V+PNM TY L+ G+ K
Sbjct: 377 DPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKK 436
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I M + G+ P+ Y ++ A+G+A E+ L ++ M E G +V YN+L+ A
Sbjct: 437 ILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFA 496
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA I M S + D +F+ +I G+ EA + EM +A EPN
Sbjct: 497 RGGLYKEAEAILSRMNES-GLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNE 555
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM---TQTPKEELGKLV 341
L +++ Y A D+ + GI P C C++ + + +
Sbjct: 556 LTLEAVLSIYCSAGLVDEGEEQFQEIKASGILP-SVMCYCMMLALYAKNDRLNDAYNLID 614
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT--------ELFNSISKDVKKAYCNCLID 393
+ S + V+ Q I+GDF E+ + NS + + N L++
Sbjct: 615 AMITMRVSDIHQVIG-----QMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLE 669
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSK 453
+ E A ++L ++ ++ +S WS+ + +S G ALTAL +W+N++ +
Sbjct: 670 ALWCMFQRERAARVLNEASKRGLFPELFRKSKLVWSVDVHRMSEGGALTALSVWLNNVHE 729
Query: 454 ALESGEEFPPLLGINTGHG 472
+G++ P + + G
Sbjct: 730 MSMTGDDLPEVATVVVVRG 748
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
R+ P+ ++T+I G +++G L ++ EM+ G++P++ITYN LL +
Sbjct: 199 RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDE 258
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +++ M ++G+ P+ NTY+ L++ +G+ E + REM+ G +T YN LL
Sbjct: 259 AEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLE 318
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A++G EA +F M+++ C ++ T+S ++ + G+ + +F EM + +
Sbjct: 319 AYAELGSIKEAMGVFRQMQAA-GCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTD 377
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+ LIQ +G+ +VV + + E + P+
Sbjct: 378 PDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPN 414
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+E + D ++TL+ G D V+ M G+ P++ TY+ L+ T G+ R
Sbjct: 232 RHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRL 291
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+V + +EM G P+ +Y LL AY ++ + V+R+M+ G + Y+ L
Sbjct: 292 EKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVL 351
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L + G D+ ++F +MK S N PD+ T++ +I + G E +F++M E
Sbjct: 352 LNLYGKHGRYDDVRDLFLEMKVS-NTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEEN 410
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EPN+ LI GK +D + L + E G+ P +
Sbjct: 411 VEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSK 451
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 5/240 (2%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K ++ N F+ + K + G++ L +++ M + I KPN + ++ +GR +
Sbjct: 93 KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDK 152
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ ++ EM NG+ +Y +++ AYGR +L + MK++ + S+ YNT++
Sbjct: 153 CREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVIN 212
Query: 222 MCADVGYTDEA-FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
CA G E +F +M+ E QPD T+++++ C+ RG EAE +F M E+G
Sbjct: 213 ACARGGLDWEGLLGLFAEMR-HEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGI 271
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ--TPKEELG 338
P++ + L+Q +GK R + V L + G PD LL + + KE +G
Sbjct: 272 VPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMG 331
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 141/319 (44%), Gaps = 6/319 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L++ Y G+ + V+ +M+A G N TY+ LL+ G+ R V+ ++
Sbjct: 309 DITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLF 368
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + P+ TY L++ +G Y ++ ++++ +M E+ ++ ++ Y L+ C
Sbjct: 369 LEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKG 428
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +I M + + P S ++ +I EA MFN M E G P +
Sbjct: 429 GLYEDAKKILLHM-NEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVET 487
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVECVE 345
SLI + + + L+R+ E G+ D F G + EE K +E
Sbjct: 488 YNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEME 547
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI--SKDVKKAYCNC-LIDLCVNLNLLE 402
K+N + + + E E F I S + C C ++ L + L
Sbjct: 548 KANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLN 607
Query: 403 NACKLLELGLTLEVYTDIQ 421
+A L++ +T+ V +DI
Sbjct: 608 DAYNLIDAMITMRV-SDIH 625
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 134/302 (44%), Gaps = 6/302 (1%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ +I L G G D C V++EM + GV + +Y +++ GR + + M
Sbjct: 138 TIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQ 197
Query: 172 NGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+SP+ TY +++ A R E L ++ EM+ +G+Q V YNTLL CA G D
Sbjct: 198 ERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGD 257
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F M S PD T+S ++ ++ + + EM G P++ L
Sbjct: 258 EAEMVFRTMNES-GIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVL 316
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNS 349
++ Y + + + ++ G + LLN+ + + +++ L ++ SN+
Sbjct: 317 LEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNT 376
Query: 350 KLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNC---LIDLCVNLNLLENACK 406
+L + EG + KE LF+ ++++ + LI C L E+A K
Sbjct: 377 DPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKK 436
Query: 407 LL 408
+L
Sbjct: 437 IL 438
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P+A++ TLI V+EEMKA G + +TYN LLD G++ RP +
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAM 334
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM NG SP+ TY SL+ AY R ++ + + +M EKG + V Y TLL+
Sbjct: 335 KVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + A IFE+M+++ C+P+ TF++ I + RGK + +F+E+ G P+
Sbjct: 395 ERAGKVESAMNIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPD 453
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +L+ +G+ +V + G P+
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 36/253 (14%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN + + F+ IK+YG G F + +++E+ G+ P+++T+N LL G+
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+V ++KEM G P T+ +L+ AY R E ++VYR M + G+ ++ YNT+
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS------------------------- 254
LA A G +++ ++ +M+ C+P+ T+ S
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGR-CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 255 ----------MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
++ +CS + EAE F+E+ E GF P++ L S++ YG+ Q
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKAN 649
Query: 305 RALNRLPELGITP 317
L+ + E G TP
Sbjct: 650 EVLDYMKERGFTP 662
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 40/291 (13%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + + +D ++++LI + +G + +NV+++M+ G KP +ITYN +L+ G+ P
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTP 259
Query: 160 W------------------------------------QVKTIYKEMTDNGLSPNWNTYAS 183
W + +++EM G S + TY +
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNA 319
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
LL YG++ ++ + V EM+ G S+ YN+L++ A G DEA E+ M + +
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM-AEK 378
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+PD +T++++++ GKV A +F EM AG +PN+ + I+ YG + D+
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDM 438
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
++ + + G++PD LL V Q + V V K + G+V
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNG---MDSEVSGVFKEMKRAGFV 486
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 9/230 (3%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+K Y + +D + + +I + G G N++ ++ G ++ +Y +L
Sbjct: 162 MKQKDYQSM-------LDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSL 214
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL-SVYREMKEKG 208
+ + R + ++K+M + G P TY +L +G+ + + S+ +MK G
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ YNTL+ C EA ++FE+MK++ D T+++++ + + EA
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSHDKVTYNALLDVYGKSHRPKEA 333
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ NEM GF P++ SLI Y + D+ + N++ E G PD
Sbjct: 334 MKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 82 PKSPRA-SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
P++ RA S+LKE+ + D ++++ +YG V + MK G
Sbjct: 611 PEAERAFSELKERGFSP---------DITTLNSMVSIYGRRQMVGKANEVLDYMKERGFT 661
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+M TYN+L+ R+ + + I +E+ G+ P+ +Y +++ AY R D +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ EM++ G+ V YNT + A +EA + M C+P+ T++S++
Sbjct: 722 FSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGCRPNQNTYNSIV 776
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 104/233 (44%), Gaps = 11/233 (4%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+S A E R PN + +L+ Y ++ EE+ + ++P + L
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTL 600
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ + + + + E+ + G SP+ T S++ YGR + V MKE+G
Sbjct: 601 VLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGF 660
Query: 210 QLSVTLYNTLLAM---CADVGYTDEAF-EIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
S+ YN+L+ M AD G ++E EI ++ +PD +++++I ++
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREIL-----AKGIKPDIISYNTVIYAYCRNTRM 715
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A +F+EM ++G P++ + I Y ++ + + + + G P+
Sbjct: 716 RDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++T++ G ++ V EM+ KPN +TY +LL K + ++
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+E+ + P +L+ + + + E+KE+G +T N+++++
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 642
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+A E+ + MK P T++S++ + S ++E + E+L G +P++
Sbjct: 643 QMVGKANEVLDYMK-ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS 701
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I Y + R D R + + + GI PD
Sbjct: 702 YNTVIYAYCRNTRMRDASRIFSEMRDSGIVPD 733
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 70/137 (51%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++L+ ++ + +F + E+ A G+KP++I+YN ++ R R I+ EM
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D+G+ P+ TY + + +Y E+ + V R M + G + + YN+++ + D
Sbjct: 727 DSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKD 786
Query: 231 EAFEIFEDMKSSENCQP 247
EA ED+++ + P
Sbjct: 787 EAKLFVEDLRNLDPHAP 803
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 219 LLAMCADVGYTDE------AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
LLA +G+ + AF+ F K ++ D+ + +I++ G+VS A +F
Sbjct: 138 LLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSML-DNSVIAIVISMLGKEGRVSSAANLF 196
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ- 331
N + E GF +++ TSLI + + R + V ++ E G P +LNV +
Sbjct: 197 NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKM 256
Query: 332 -TPKEELGKLVE 342
TP ++ LVE
Sbjct: 257 GTPWNKITSLVE 268
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I Y ++ EM+ G+ P++ITYN + + + +
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 167 KEMTDNGLSPNWNTYASLLRAY 188
+ M +G PN NTY S++ Y
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGY 779
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 208/457 (45%), Gaps = 31/457 (6%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN 142
K A KL+EK ++ ++D ++TL+ +Y G +D V E+M+ +G++ +
Sbjct: 179 KYDEALKLREK-----MKSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKD 233
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+TYN+L++ G+ R V + ++M G++P+ TY++L+ Y +A D +VY
Sbjct: 234 TVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYL 293
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+ KE G++ V L+++ + A G + A + ++M +P+ T++++I +
Sbjct: 294 DFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKM-GIKPNVVTYNTIIDAFG-K 351
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA------QRTDD---VVRALNRLPEL 313
K+ E N + + + T+ + G++ +R+ + ++ ++ +
Sbjct: 352 SKILTEEDPGNMGIVGVYGGQIVRATNPVTRGGRSATDVRMRRSQELFFILELFQKMVQQ 411
Query: 314 GITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK-SNSKLGYVVKLLLEEQDIEGDFKKE 371
G+ P+ +LN ++ E+ L+E + NS G LL+ + +
Sbjct: 412 GVRPNVVTFSAILNACSRCNNFEDAALLLEQLRLFDNSVYGVAYGLLMGHLEAW----SQ 467
Query: 372 ATELFNSISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
A LFN + + A+ N L D+ + + A +++ G+ V+ + +
Sbjct: 468 ARSLFNQLGRMDSPTSSAFYNALTDVLWHFGQRQGAQQVVLEGVNRRVWENTWG----DF 523
Query: 429 SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK--YSDKGLASVFE 486
L L +S GAA +H W+ ++ + G P L I TG GKH L V E
Sbjct: 524 CLDLHLMSCGAAQAMVHAWLLNVRSIVFEGRAMPEFLSILTGWGKHSKIAGSSTLRRVIE 583
Query: 487 SHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSSL 523
+ L + APF +G F++ A +WL ++
Sbjct: 584 ALLLSIGAPFQVERFNIGRFVSPSALVAAWLRESGTV 620
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 7/237 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ AG+ + V++EM +G ++ TYN +D + + +
Sbjct: 93 DRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVV 152
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M N + PN TY++L+ + + ++ L + +MK G+QL YNTLLA+
Sbjct: 153 LDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKT 212
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DE + EDM++ + D+ T++S+I +G++ + +M G P++
Sbjct: 213 GKYDEIATVCEDMENL-GIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLT 271
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
++LI Y KA D E G+ D ++ + + LVEC
Sbjct: 272 YSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKN------GLVEC 322
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 37/244 (15%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY-KE 168
A S LI Y +G + V E MK G++P ++YN ++D G+ + Y ++
Sbjct: 25 AHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQ 84
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA--- 224
M +GL P+ T+ SLL A RA + ED +V+ EM G + YNT + A+C
Sbjct: 85 MLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGN 144
Query: 225 -------------------DVGYT------------DEAFEIFEDMKSSENCQPDSWTFS 253
V Y+ DEA ++ E MKS Q D ++
Sbjct: 145 MELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSL-GIQLDRVCYN 203
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+++ I GK E + +M G E + SLI YGK R D V + +
Sbjct: 204 TLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQ 263
Query: 314 GITP 317
G+ P
Sbjct: 264 GVAP 267
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED---TLS 199
+ ++ L+ R+ + + + M GL P +Y +++ A G+ G D TL
Sbjct: 23 VFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKG--GVDLRFTLG 80
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TI 258
+R+M + G+ +N+LLA C+ G+ ++A +F++M + + D +T+++ + I
Sbjct: 81 YFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGR-DIYTYNTFVDAI 139
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
C C G + A + +M +PN+ ++L+ + K ++ D+ ++ ++ LGI
Sbjct: 140 CKC-GNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQL- 197
Query: 319 DRFC-GCLLNVMTQTPK-EELGKLVECVE 345
DR C LL + +T K +E+ + E +E
Sbjct: 198 DRVCYNTLLAIYVKTGKYDEIATVCEDME 226
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI ++ V +EMK G P+ +TYN LLD G+++R + +
Sbjct: 270 DSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVL 329
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM NG P+ TY SL+ AY R ED L + +M EKG++ V Y TLL+
Sbjct: 330 QEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKA 389
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV--------------------- 265
G A +IFE+M+ +E C+P+ TF+++I + RGK
Sbjct: 390 GKDKAAVQIFEEMR-NEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVT 448
Query: 266 --------------SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
SE +F EM AGF P +LI Y + D + R+
Sbjct: 449 WNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRML 508
Query: 312 ELGITPD 318
E G+ PD
Sbjct: 509 EAGVNPD 515
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 115/218 (52%), Gaps = 2/218 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
+ + +D A++++I + + G + + V+++M+ +G KP +ITYN +L+ G+ PW
Sbjct: 194 DGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWN 253
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + M G++P+ TY +L+ R E+ V +EMK G YN LL
Sbjct: 254 KMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALL 313
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ + EA E+ ++M+ + C P T++S+I+ + G + +A + N+M+E G
Sbjct: 314 DVYGKSRRSKEAMEVLQEMEGN-GCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGI 372
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P++F T+L+ + KA + V+ + G P+
Sbjct: 373 KPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPN 410
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RNE + + F+ LIK++G G F + V+E++K P+++T+N LL G+
Sbjct: 403 RNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMD 462
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+V ++KEM G P +T+ +L+ +Y R + ++VY+ M E G+ ++ YN +
Sbjct: 463 SEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAV 522
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
LA A G ++ ++ +MK C+P+ T+ S++ + ++ A+ E+
Sbjct: 523 LAALARGGLWKQSEKVLAEMKDGR-CKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI 581
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EP +L +L+ K + RA L + G +PD
Sbjct: 582 IEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPD 620
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Query: 111 FSTLIKLYGTAGN-FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ ++ +YG G ++ + + + MK+ G+ P+ TYN L+ R + + KEM
Sbjct: 238 YNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEM 297
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G SP+ TY +LL YG++R ++ + V +EM+ G S+ YN+L++ A G
Sbjct: 298 KLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLL 357
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
++A E+ M + +PD +T++++++ GK A +F EM G +PN+ +
Sbjct: 358 EDALELKNQM-VEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNA 416
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
LI+ +G + ++++ + +PD LL+V Q
Sbjct: 417 LIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQ 458
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+TLI Y G+FD + VY+ M GV P++ +YN +L + R Q + + E
Sbjct: 482 DTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAE 541
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D PN TY SLL AY + E ++ E+ ++ L TL+ + +
Sbjct: 542 MKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDL 601
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
E F +++ PD T ++M++I R V++A + + M GF P+L
Sbjct: 602 LMETERAFLELRQ-RGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYN 660
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ Y ++ + L + GI PD
Sbjct: 661 SLMYMYSRSANFERSEEILREILAKGIRPD 690
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 93/214 (43%), Gaps = 2/214 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ + + +I + G G ++ + G ++ Y +++ R + +
Sbjct: 163 LNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMV 222
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+K+M + G P TY +L YG+ + + MK G+ YNTL++ C
Sbjct: 223 FKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCR 282
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+EA + ++MK + PD T+++++ + + EA + EM G P++
Sbjct: 283 RGNLYEEAAGVLKEMKLA-GFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSI 341
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI Y + +D + N++ E GI PD
Sbjct: 342 VTYNSLISAYARDGLLEDALELKNQMVEKGIKPD 375
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 1/183 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ E++ G P++ T N ++ GR + + I M G +P+ TY SL+ Y R
Sbjct: 609 FLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSR 668
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ E + + RE+ KG++ + YNT++ G +A + +M+ S PD
Sbjct: 669 SANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRES-GPAPDII 727
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+++ I + EA + M++ G +PN S++ Y K R D+ +N L
Sbjct: 728 TYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNL 787
Query: 311 PEL 313
+L
Sbjct: 788 RKL 790
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
K+ + VN K + + + R R + D + ++ +YG + + M
Sbjct: 590 KTLVLVNSKCDLLMETERAFLELRQRG--FSPDITTLNAMVSIYGRRQMVAKANEILDCM 647
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G P++ TYN+L+ R+ + + I +E+ G+ P+ +Y +++ AY R
Sbjct: 648 KRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRM 707
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
D V EM+E G + YNT +A A EA ++ M C+P+ T++S
Sbjct: 708 RDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYM-IKHGCKPNQSTYNS 766
Query: 255 MI 256
++
Sbjct: 767 IV 768
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R PN + +L+ Y + + EE+ + ++P + L+ + +
Sbjct: 546 RCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMET 605
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ + E+ G SP+ T +++ YGR + + MK G S+T YN+L+ M
Sbjct: 606 ERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYM 665
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ + + EI ++ ++ +PD +++++I G++ +A + +EM E+G P
Sbjct: 666 YSRSANFERSEEILREI-LAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAP 724
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + I Y + + + + + G P+
Sbjct: 725 DIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPN 760
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 62/122 (50%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++L+ +Y + NF+ + E+ A G++P++I+YN ++ R R + EM
Sbjct: 659 YNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR 718
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G +P+ TY + + +Y + + V M + G + + + YN+++ + D
Sbjct: 719 ESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRD 778
Query: 231 EA 232
EA
Sbjct: 779 EA 780
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 4/244 (1%)
Query: 86 RASKLKEKSYDTRARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
R ++KE S+ N + + +D ++TLIK Y GNF L ++ EM G+ P++I
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY +L+ +M +A + +M GL PN TY +L+ + + Y + V REM
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG- 263
+ G SV YN L+ G ++A + EDMK + PD ++S++++ CR
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK-EKGLSPDVVSYSTVLS-GFCRSY 464
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
V EA + EM+E G +P+ +SLIQ + + +RT + + +G+ PD+
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 324 CLLN 327
L+N
Sbjct: 525 ALIN 528
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 145/352 (41%), Gaps = 67/352 (19%)
Query: 4 NLCYSTCSLFSTPKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNP 63
+LCYST S+F D + YS+ SL +++S+ + H P
Sbjct: 128 DLCYSTSSVF----------------DLVVKSYSRLSLIDKALSIVHLAQA----HGFMP 167
Query: 64 QYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTA 121
S + + +S R E + ++ + PN F+ LI+ + A
Sbjct: 168 GVL------SYNAVLDATIRSKRNISFAENVFKEMLESQ---VSPNVFTYNILIRGFCFA 218
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLD------------------------------ 151
GN D L ++++M+ G PN++TYN L+D
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 152 -----TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+ R R +V + EM G S + TY +L++ Y + L ++ EM
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ SV Y +L+ G + A E + M+ C P+ T+++++ S +G ++
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMN 397
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EA + EM + GF P++ +LI + + +D + L + E G++PD
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 56/261 (21%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST++ + + + D L V EM G+KP+ ITY++L+ +R + +Y
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV------------- 213
+EM GL P+ TY +L+ AY E L ++ EM EKG+ V
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 214 ----------------------TLYNTLLAMCADV---------------GYTDEAFEIF 236
Y+TL+ C+++ G EA ++F
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 237 EDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY- 294
E M +N +PD ++ MI CR G + +A ++ EM+++GF + + +L++
Sbjct: 629 ESM-LGKNHKPDGTAYNIMIH-GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 295 --GKAQRTDDVVRALNRLPEL 313
GK + V+ + R EL
Sbjct: 687 KEGKVNELNSVIVHVLRSCEL 707
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 55/261 (21%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRA--------RNEKWRI----DPNAFS---- 112
K G+ ++ +++ R E++Y T NE +R+ + N FS
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 113 ---TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
LI + G + + V E+MK G+ P++++Y+ +L R+ + + +EM
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G+ P+ TY+SL++ + R ++ +Y EM G+
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL-------------------- 516
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
PD +T++++I G + +A + NEM+E G P++ +
Sbjct: 517 ----------------PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 290 LIQCYGKAQRTDDVVRALNRL 310
LI K RT + R L +L
Sbjct: 561 LINGLNKQSRTREAKRLLLKL 581
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 121/227 (53%), Gaps = 3/227 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI ++G GN+ + V + ++ G KP + TYN +L R+ +P +
Sbjct: 141 PNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRV 200
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y+ M +G P TY +L+ AYG+ E+ L ++++M +G + +V Y++L++ C
Sbjct: 201 YERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEK 260
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A E+ ++M +NC+P++ TF+++++ C+ G+ A+ +F +M G +P+
Sbjct: 261 AGRWQLALELLDEMH-RDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAV 319
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI + + + ++AL+ + G PD ++ +T++
Sbjct: 320 SYAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRS 366
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I G+ L + EM+ GV N+ TY+ L++ +A +Y
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ G +PN TY L+ +G+ ++ + V ++++G + V YNT+L+ C
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRS 191
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A ++E M ++ QP + T++++I+ GK+ EA +F +M+ G E N+
Sbjct: 192 GQPEHALRVYERML-ADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVIT 250
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+SLI KA R + L+ + P+ LL+ Q
Sbjct: 251 YSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQ 295
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V Y T+++ C +A E+ +M+ + T+S+++ +C ++ A ++
Sbjct: 73 VYTYTTIISQCGSHQQLRKALELVAEMRG-HGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
++L G PNL LI +GK + V+ L+ L + G P+ R +L+ ++
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRS 191
Query: 333 PKEE 336
+ E
Sbjct: 192 GQPE 195
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++++++++G AG + LN+ +EM+ +P+ ITYN L+ RA + + M
Sbjct: 346 YNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMA 405
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN TY +++ AYG+A + L V+ +MKE G +V YN +L + ++
Sbjct: 406 SKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSE 465
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ +I DMK + C PD T+++M+ +C +GK + EM GFEP+ +L
Sbjct: 466 DMIKILCDMKLN-GCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTL 524
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ DV + + G TP LLN + +
Sbjct: 525 ISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALAR 565
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 2/218 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
E++ +D A +T++ Y G + + ++E+MK G+ P ++TYN +LD G+ R W
Sbjct: 231 EEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWS 290
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + EM GL + T +++ A GR ++ + ++K G + YN++L
Sbjct: 291 MILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSML 350
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA I ++M+ + NC+PD+ T++ ++ G E A+ + M G
Sbjct: 351 QVFGKAGVYTEALNILKEMEDN-NCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGV 409
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN T++I YGKA D + ++ ELG P+
Sbjct: 410 MPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPN 447
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 13/208 (6%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++T+I YG AG+ D L V+ +MK +G PN+ TYNN+L +G+ R + I
Sbjct: 411 PNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKI 470
Query: 166 YKEMTDNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+M NG P+ WNT ++ G+ ++ L REMK G + +NTL++
Sbjct: 471 LCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVL---REMKNCGFEPDKETFNTLISA 527
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G + +++ +M ++ P T+++++ + RG AE++ +M + GF+P
Sbjct: 528 YGRCGSEVDVAKMYGEMVAA-GFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKP 586
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRL 310
N + L+ CY KA VR L ++
Sbjct: 587 NETSYSLLLHCYSKAGN----VRGLEKV 610
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
G + +++ G K +M+ N++L R ++ + + + +GL PN TY SL+
Sbjct: 641 GMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLI 700
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y R + ++++ G+ V YNT++ G EA I +M ++
Sbjct: 701 DLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEM-TANGV 759
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
QP TF++ ++ + G +EA+ + M+E G PN +I Y KA++ + +
Sbjct: 760 QPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMD 819
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKS 347
++++ E+ I+ DD + L KL C+ +S
Sbjct: 820 FVSKIKEIDISFDD---------------QSLKKLASCIRES 846
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
R K E+++ + +N +++D ++++ ++ + + + + G++PN++T
Sbjct: 637 RQLKGMERAFH-QLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVT 695
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN+L+D R W+ + + K++ ++G+SP+ +Y ++++ + + ++ + + EM
Sbjct: 696 YNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMT 755
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G+Q +NT ++ A G EA E+ M C P+ T+ +I
Sbjct: 756 ANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYM-IEHGCMPNELTYKIVI 805
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 5/214 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T++ + G G V EMK G +P+ T+N L+ GR V +Y
Sbjct: 482 DRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMY 541
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G +P TY +LL A R + SV +M++KG + + T Y+ LL +
Sbjct: 542 GEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKA 601
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTF--SSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++ +M+ + SW + ++T CR ++ E F+++ G++ ++
Sbjct: 602 GNVRGLEKV--EMEIYDGHVFPSWMLLRTLVLTNYKCR-QLKGMERAFHQLQNNGYKLDM 658
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V+ S++ + + Q+ + L+ + G+ P+
Sbjct: 659 VVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPN 692
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 122/231 (52%), Gaps = 10/231 (4%)
Query: 103 KWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAK 157
K +I+ N S I + G G + +V E+MK GV PN+ITYN L+D MGR
Sbjct: 148 KRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIG 207
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ I KEM G+ PN TY L+ + + + V+ EM+ +G++ +V YN
Sbjct: 208 KMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYN 267
Query: 218 TLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEM 275
L+ +C+D G DEA + + M SS+ +P+ T + +I C+ K V+EA +FN+M
Sbjct: 268 ILINGLCSD-GKVDEAVALRDQMVSSD-LEPNVVTHNVLIN-GFCKNKTVNEAINLFNDM 324
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+ G +PN T+LI Y K R +D N + + GI P+ CL+
Sbjct: 325 EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 107/215 (49%), Gaps = 5/215 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN ++ LI + N G + V+ EM+ G++PN++TYN L++ + + +
Sbjct: 224 ICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAV 283
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
+ +M + L PN T+ L+ + + + + ++++ +M+++G+ + Y TL+ A
Sbjct: 284 ALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAY 343
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C D G ++AF ++ +M P+ T++ +I +G V A ++ NEM+
Sbjct: 344 CKD-GRMEDAFALY-NMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSA 401
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++ LI K + V+ L+ + E G+ P
Sbjct: 402 DVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNP 436
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ + PN ++ LI + G D + + ++M + ++PN++T+N L++ + K
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTV 314
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M G+ PN TY +L+ AY + ED ++Y M ++G+ V+ YN L
Sbjct: 315 NEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCL 374
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+A G A + +M S+ D T++ +I +G+ +A + +EM E G
Sbjct: 375 IAGLCRKGDVKAARSLMNEM-VSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433
Query: 280 FEPNLFVLTSLIQCY 294
P+ +L+ Y
Sbjct: 434 LNPSHVTYNTLMDGY 448
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 6/157 (3%)
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+K D G + + LL + D VYREM ++ ++L+V +N ++
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCK 167
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR----GKVSEAEAMFNEMLEAGFE 281
VG + A ++ EDMK P+ T++++I C+ GK+ +A+A+ EM+ G
Sbjct: 168 VGKLNRAGDVIEDMKVW-GVSPNVITYNTLID-GYCKMGRIGKMYKADAILKEMVAKGIC 225
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN LI + K + +R + G+ P+
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPN 262
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 80/219 (36%), Gaps = 73/219 (33%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP------------------ 141
EK +DPNA ++TLI Y G + +Y M G+ P
Sbjct: 325 EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDV 384
Query: 142 -----------------NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+++TYN L+D++ + + + EM + GL+P+ TY +L
Sbjct: 385 KAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTL 444
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ Y R L V M+ KG Q +V +N L+ G+
Sbjct: 445 MDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIK-----GFC--------------- 484
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G++ +A + NEMLE G PN
Sbjct: 485 ----------------LKGRLEDANGLLNEMLERGLVPN 507
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 180/400 (45%), Gaps = 45/400 (11%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +S L+ LYG G +D +++ EMK +PN TYN L++ G +V T+
Sbjct: 355 PNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTL 414
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + + PN TY L+ A G+ ED + M EKG+ S Y ++
Sbjct: 415 FHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQ 474
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+EA F M +P T++S+I + + G E+EA+ +M ++G N
Sbjct: 475 AALYEEALVAFNTMNEV-GSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRD 533
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKL 340
+I+ + + + ++ ++A + + PD++ +L+V + + +E+ G+
Sbjct: 534 TFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGE- 592
Query: 341 VECVEKSNSKLGYVVKL--------------LLEE--------------QDIEGDFKKEA 372
++ + S + Y + L LL+E Q I GD+ ++
Sbjct: 593 IKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDS 652
Query: 373 T-ELFNSISKDVKKAYC-------NCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRS 424
++ + + +K C N L++ L E A ++L ++ ++ ++
Sbjct: 653 NWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPELFRKN 712
Query: 425 PTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPL 464
WS+ + + GAA TA+ +W+N++ + SG++ P L
Sbjct: 713 KLVWSVDVHRMWEGAACTAISVWLNNMHEMFISGDDLPQL 752
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 122/240 (50%), Gaps = 5/240 (2%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K ++ N F+ + K + G++ L +++ M + I KPN Y ++ +GR +
Sbjct: 105 KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEK 164
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ I+ EM +G++P+ ++ +L+ AYGR + +L + MK++ + S+ YNT++
Sbjct: 165 CQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVIN 224
Query: 222 MCADVGYT-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
CA G +E +F M+ E Q D T++++++ C+ RG EAE +F M E G
Sbjct: 225 SCARGGLDWEELLGLFAQMR-HEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGI 283
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELG 338
P++ + L++ +GK R + V L + G PD LL Q+ KE +G
Sbjct: 284 LPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMG 343
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S L++ +G + + +EM++ G P++ +YN LL+ ++ + ++
Sbjct: 286 DITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVF 345
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M G PN TY+ LL YGR +D ++ EMK + + YN L+ + +
Sbjct: 346 RQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEG 405
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY E +F DM EN +P+ T+ +I C G +A+ + M E G P+
Sbjct: 406 GYFKEVVTLFHDM-VEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKA 464
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
T +I+ YG+A ++ + A N + E+G P
Sbjct: 465 YTGVIEAYGQAALYEEALVAFNTMNEVGSKP 495
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
+ R+E + D ++TL+ G D V+ M G+ P++ TY+ L++T G+
Sbjct: 241 AQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKL 300
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R +V + KEM G P+ +Y LL A+ ++ ++ + V+R+M+ G + Y
Sbjct: 301 NRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATY 360
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+ LL + G D+ ++F +MK S N +P++ T++ +I + G E +F++M+
Sbjct: 361 SILLNLYGRHGRYDDVRDLFLEMKVS-NTEPNAATYNILINVFGEGGYFKEVVTLFHDMV 419
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
E EPN+ LI GK +D + L + E G+ P +
Sbjct: 420 EENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSK 463
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTIYKE 168
+F+ LI YG G + L + + MK V P+++TYN ++++ R W+ + ++ +
Sbjct: 183 SFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQ 242
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ + TY +LL A R G++ V+R M E G+ +T Y+ L+ +
Sbjct: 243 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 302
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++ E+ ++M+S + PD +++ ++ + G + EA +F +M AG PN +
Sbjct: 303 LEKVSELLKEMESGGSF-PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYS 361
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
L+ YG+ R DDV + P+ L+NV +
Sbjct: 362 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGE 404
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
R +K R+ P+ ++T+I G +++ L ++ +M+ G++ +++TYN LL R
Sbjct: 206 RMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARR 265
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + +++ M + G+ P+ TY+ L+ +G+ E + +EM+ G +T Y
Sbjct: 266 GLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSY 325
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N LL A G EA +F M+ + C P++ T+S ++ + G+ + +F EM
Sbjct: 326 NVLLEAHAQSGSIKEAMGVFRQMQGA-GCVPNAATYSILLNLYGRHGRYDDVRDLFLEMK 384
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EPN LI +G+ +VV + + E + P+
Sbjct: 385 VSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPN 426
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L++ + +G+ + V+ +M+ G PN TY+ LL+ GR R V+ ++
Sbjct: 321 DITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLF 380
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + PN TY L+ +G Y ++ ++++ +M E+ ++ ++ Y L+ C
Sbjct: 381 LEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKG 440
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +I M + + P S ++ +I EA FN M E G +P +
Sbjct: 441 GLHEDAKKILLHM-NEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVET 499
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCL 325
SLIQ + K + L ++ + G+ + D F G +
Sbjct: 500 YNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVI 539
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI ++ V+EEMK G P+ +T+N LLD G+++RP + +
Sbjct: 287 DDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVL 346
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM +G SP+ TY SL+ AY R + + + +M EKG++ V Y TLL+
Sbjct: 347 KEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKA 406
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-------------------ICSC------ 261
G + A IF +M+++ C+P+ TF+++I IC+C
Sbjct: 407 GMDEPAMRIFGEMRAA-GCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVT 465
Query: 262 ----------RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
G SE +F EM AGF P +LI Y + + R+
Sbjct: 466 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRML 525
Query: 312 ELGITPD 318
E G+TPD
Sbjct: 526 EAGVTPD 532
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + + +D A+++LI Y + G + + V+++M+ G KP +ITYN +L+ G+ P
Sbjct: 209 RKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMP 268
Query: 160 W------------------------------------QVKTIYKEMTDNGLSPNWNTYAS 183
W + +++EM +G SP+ T+ +
Sbjct: 269 WSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNT 328
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
LL YG++R ++ + V +EM+ G S+ YN+L++ A G EA E+ +D +
Sbjct: 329 LLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMEL-KDQMVEK 387
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+PD +T++++++ G A +F EM AG +PN+ +LI+ +G R ++
Sbjct: 388 GIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEM 447
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQ 331
++ + PD LL V Q
Sbjct: 448 MKVFEEIEICNCAPDIVTWNTLLAVFGQ 475
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 39/247 (15%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LIK++G G F + V+EE++ P+++T+N LL G+ +V +
Sbjct: 426 PNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGV 485
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM G P +T+ +L+ AY R + ++VY+ M E G+ ++ YN +LA A
Sbjct: 486 FKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALAR 545
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI----------------------------- 256
G +++ ++F +MK C+P+ T+ S++
Sbjct: 546 GGLWEQSEKVFAEMKDGR-CKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPV 604
Query: 257 ---TICSCRGK---VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+ K + E E F E+ + G P+L L ++I YG+ Q LN +
Sbjct: 605 LLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFM 663
Query: 311 PELGITP 317
E G +P
Sbjct: 664 NESGFSP 670
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 2/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+TLI Y G+F + VY+ M GV P++ +YN +L + R Q + ++ E
Sbjct: 499 DTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAE 558
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D PN TY SLL AY ++ E ++ E+ + L TL+ + +
Sbjct: 559 MKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDL 618
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
E FE++K + PD T ++MI I R V++A + N M E+GF P+L
Sbjct: 619 LMETEHAFEELK--KKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYN 676
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ + +++ + L + G+ PD
Sbjct: 677 SLMYMHSRSENFERSEEVLKEILAKGLKPD 706
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ +I + G G ++ ++ G ++ Y +L+ R ++K+M +
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P TY +L YG+ +S + MK G+ YNTL++ C +
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYE 305
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA ++FE+MK S PD TF++++ + + EA + EM +GF P++ SL
Sbjct: 306 EAAQVFEEMKLS-GFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSL 364
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I Y + + + +++ E GI PD
Sbjct: 365 ISAYARDGLLREAMELKDQMVEKGIKPD 392
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++L+ ++ + NF+ V +E+ A G+KP++I+YN ++ R R I+ M
Sbjct: 675 YNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMK 734
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
GL P+ TY + + +Y ED + V R M + G + + YN+++
Sbjct: 735 TYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIV 784
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 4/182 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
K+ + VN K L E + +K D + + +I +YG + M
Sbjct: 607 KTLVLVNSK---CDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFM 663
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
G P++ TYN+L+ R++ + + + KE+ GL P+ +Y +++ AY R
Sbjct: 664 NESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRM 723
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+D ++ MK G+ V YNT +A A ++A + M C+ + T++S
Sbjct: 724 KDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYM-IKHGCKRNQNTYNS 782
Query: 255 MI 256
++
Sbjct: 783 IV 784
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 209 MQLSVTLYNTL----LAMCADVGY---TDEAFEIF------EDMKSSENCQPDSWTFSSM 255
+ LS +N+L L + +G+ D A +F ED +S NC + +
Sbjct: 133 LSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNCS----VVAVI 188
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
IT+ GKVS A ++ N + + GF+ +++ TSLI Y R D V ++ E G
Sbjct: 189 ITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGC 248
Query: 316 TPDDRFCGCLLNV 328
P +LNV
Sbjct: 249 KPTLITYNVILNV 261
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 126/249 (50%), Gaps = 4/249 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+ + +D A++T++ Y G ++ +N++E MK +G P ++TYN +LD G+ R W+
Sbjct: 211 QDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR 270
Query: 162 -VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM GL + T +++L A R + + E+K G + YN LL
Sbjct: 271 KILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALL 330
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA + ++M+ + NC DS T++ ++ + G EA + M + G
Sbjct: 331 QVFGKAGVYTEALSVLKEMEEN-NCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGV 389
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGK 339
PN T++I YGKA + D+ ++ + E G P+ +L+++ + + E+ K
Sbjct: 390 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIK 449
Query: 340 LVECVEKSN 348
++ C KSN
Sbjct: 450 ML-CDMKSN 457
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AG + L+V +EM+ + +TYN L+ RA + + + MT
Sbjct: 326 YNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMT 385
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN TY +++ AYG+A ++ L ++ MKE G + YN +L+M ++
Sbjct: 386 QKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSN 445
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E ++ DMKS+ C P+ T+++++ +C +G +F EM GFEP+ +L
Sbjct: 446 EMIKMLCDMKSN-GCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 504
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ D + + G LLN + +
Sbjct: 505 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 545
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP---- 159
+ PNA ++T+I YG AG D L ++ MK G PN TYN +L +G+ R
Sbjct: 389 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMI 448
Query: 160 -----------------WQ--------------VKTIYKEMTDNGLSPNWNTYASLLRAY 188
W V +++EM G P+ +T+ +L+ AY
Sbjct: 449 KMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 508
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
GR D +Y EM G VT YN LL A G + DMK S+ +P
Sbjct: 509 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK-SKGFKPT 567
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
++S M+ + G E + + E P+ +L +L+ K + RA
Sbjct: 568 ETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 627
Query: 309 RLPELGITPDDRFCGCLLNVMTQ 331
+ G PD +L++ T+
Sbjct: 628 LFKKHGYKPDMVIFNSMLSIFTR 650
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
RA E+++ T + ++ D F++++ ++ +D + + + G+ P+++T
Sbjct: 617 RALAGSERAF-TLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVT 675
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN+L+D R W+ + I K + + L P+ +Y ++++ + R ++ + + EM
Sbjct: 676 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMT 735
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GK 264
E+G++ + YNT ++ +G E ++ E M + +C+P+ TF M+ CR GK
Sbjct: 736 ERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECM-AKNDCRPNELTF-KMVVDGYCRAGK 793
Query: 265 VSEA 268
SEA
Sbjct: 794 YSEA 797
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV-KTI 165
D + F+TLI YG G+ +Y EM G + TYN LL+ + R K W+ + +
Sbjct: 497 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR-KGDWRSGENV 555
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR---EMKEKGMQLSVTLYNTLLAM 222
+M G P +Y+ +L+ Y + G + L + R + E + S L TLL
Sbjct: 556 ISDMKSKGFKPTETSYSLMLQCYAK---GGNYLGIERIEEGINEGQIFPSWMLLRTLLLA 612
Query: 223 ---CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
C + ++ AF +F+ +PD F+SM++I + +AE + + E G
Sbjct: 613 NFKCRALAGSERAFTLFK----KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDG 668
Query: 280 FEPNLFVLTSLIQCY---GKAQRTDDVVRALNR 309
P+L SL+ Y G+ + +++++ L +
Sbjct: 669 LNPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 701
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L+ G++ NV +MK+ G KP +Y+ +L + ++ I + +
Sbjct: 536 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGIN 595
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ + P+W +LL A + R + + K+ G + + ++N++L++ D
Sbjct: 596 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 655
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A I + + + PD T++S++ + RG+ +AE + + ++ +P+L ++
Sbjct: 656 QAEGILQSIHE-DGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 714
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
I+ + + + VR L+ + E GI P
Sbjct: 715 IKGFCRKGLMQEAVRMLSEMTERGIRP 741
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++S +++ Y GN+ G + E + + P+ + LL + + + +
Sbjct: 570 SYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF 629
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+G P+ + S+L + R + + + + E G+ + YN+L+ M G
Sbjct: 630 KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGEC 689
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A EI + ++ S+ +PD +++++I +G + EA M +EM E G P +F +
Sbjct: 690 WKAEEILKTLEKSQ-LKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNT 748
Query: 290 LIQCY---GKAQRTDDVVRALNR 309
+ Y G +DV+ + +
Sbjct: 749 FVSGYTAMGMYGEIEDVIECMAK 771
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
G + K G KP+M+ +N++L R Q + I + + ++GL+P+ TY SL+
Sbjct: 621 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLM 680
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y R + + +++ ++ + YNT++ G EA + +M +
Sbjct: 681 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEM-TERGI 739
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+P +T+++ ++ + G E E + M + PN ++ Y +A + + +
Sbjct: 740 RPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 799
Query: 306 ALNRLPELGITPDDR 320
++++ DD+
Sbjct: 800 FVSKIKTFDPCFDDQ 814
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 180/400 (45%), Gaps = 45/400 (11%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +S L+ LYG G +D +++ EMK +PN TYN L++ G +V T+
Sbjct: 113 PNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTL 172
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + + PN TY L+ A G+ ED + M EKG+ S Y ++
Sbjct: 173 FHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQ 232
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+EA F M +P T++S+I + + G E+EA+ +M ++G N
Sbjct: 233 AALYEEALVAFNTMNEV-GSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRD 291
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKL 340
+I+ + + + ++ ++A + + PD++ +L+V + + +E+ G+
Sbjct: 292 TFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGE- 350
Query: 341 VECVEKSNSKLGYVVKL--------------LLEE--------------QDIEGDFKKEA 372
++ + S + Y + L LL+E Q I GD+ ++
Sbjct: 351 IKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDS 410
Query: 373 T-ELFNSISKDVKKAYC-------NCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRS 424
++ + + +K C N L++ L E A ++L ++ ++ ++
Sbjct: 411 NWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPELFRKN 470
Query: 425 PTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPL 464
WS+ + + GAA TA+ +W+N++ + SG++ P L
Sbjct: 471 KLVWSVDVHRMWEGAACTAISVWLNNMHEMFISGDDLPQL 510
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S L++ +G + + +EM++ G P++ +YN LL+ ++ + ++
Sbjct: 44 DITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVF 103
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M G PN TY+ LL YGR +D ++ EMK + + YN L+ + +
Sbjct: 104 RQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEG 163
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY E +F DM EN +P+ T+ +I C G +A+ + M E G P+
Sbjct: 164 GYFKEVVTLFHDM-VEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKA 222
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
T +I+ YG+A ++ + A N + E+G P
Sbjct: 223 YTGVIEAYGQAALYEEALVAFNTMNEVGSKP 253
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+E + D ++TL+ G D V+ M G+ P++ TY+ L++T G+ R
Sbjct: 2 RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRL 61
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+V + KEM G P+ +Y LL A+ ++ ++ + V+R+M+ G + Y+ L
Sbjct: 62 EKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSIL 121
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L + G D+ ++F +MK S N +P++ T++ +I + G E +F++M+E
Sbjct: 122 LNLYGRHGRYDDVRDLFLEMKVS-NTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN 180
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EPN+ LI GK +D + L + E G+ P +
Sbjct: 181 VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSK 221
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L++ + +G+ + V+ +M+ G PN TY+ LL+ GR R V+ ++
Sbjct: 79 DITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLF 138
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + PN TY L+ +G Y ++ ++++ +M E+ ++ ++ Y L+ C
Sbjct: 139 LEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKG 198
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +I M + + P S ++ +I EA FN M E G +P +
Sbjct: 199 GLHEDAKKILLHM-NEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVET 257
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCL 325
SLIQ + K + L ++ + G+ + D F G +
Sbjct: 258 YNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVI 297
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ G++ +++TYN LL R + + +++ M + G+ P+ TY+ L+ +G+
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
E + +EM+ G +T YN LL A G EA +F M+ + C P++ T+S
Sbjct: 61 LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGA-GCVPNAATYS 119
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++ + G+ + +F EM + EPN LI +G+ +VV + + E
Sbjct: 120 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE 179
Query: 314 GITPD 318
+ P+
Sbjct: 180 NVEPN 184
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ + TY +LL A R G++ V+R M E G+ +T Y+ L+ +
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++ E+ ++M+S + PD +++ ++ + G + EA +F +M AG PN +
Sbjct: 61 LEKVSELLKEMESGGSF-PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYS 119
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
L+ YG+ R DDV + P+ L+NV +
Sbjct: 120 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGE 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
E Q D T++++++ C+ RG EAE +F M E G P++ + L++ +GK R +
Sbjct: 4 EGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEK 63
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELG 338
V L + G PD LL Q+ KE +G
Sbjct: 64 VSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMG 101
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI ++ V+E+MK++G P+ +TYN LLD G+++R + +
Sbjct: 103 DEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVL 162
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM NG SP+ TY SL+ AY R E+ + + +M E+G++L V Y +L+
Sbjct: 163 REMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRT 222
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A +FE+M+++ C+P+ TF+++I + RGK +E +F E+ P++
Sbjct: 223 GKDESAMRVFEEMRTA-GCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVT 281
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ +G+ +V + +G P+
Sbjct: 282 WNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPE 313
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 113/247 (45%), Gaps = 38/247 (15%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LIK++G G F + V+EE+K P+++T+N LL G+ +V +
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGV 301
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM G P +TY +L+ AY R + +++Y+ M + G+ ++ YN +LA A
Sbjct: 302 FKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALAR 361
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGKVS---- 266
G +++ +I +M+ C+P+ T S++ + C G +
Sbjct: 362 GGLWEQSEKILAEMQDG-MCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAV 420
Query: 267 ----------------EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
EAE F E+ GF P+L L ++I YG+ Q LN +
Sbjct: 421 LLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFM 480
Query: 311 PELGITP 317
E G TP
Sbjct: 481 KESGFTP 487
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 111/213 (52%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTI 165
D A+++LI + G + + V+++M+ G KP +ITYN +L+ G+ PW ++ +
Sbjct: 32 DVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGL 91
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M + G+ P+ TY +L+ R E+ +V+ +MK G YNTLL +
Sbjct: 92 FEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGK 151
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
EA E+ +M+ + C P T++S+I+ + G + EA + N+M+E G + ++F
Sbjct: 152 SRRIKEAIEVLREMEVN-GCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVF 210
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+++ + + + + +R + G P+
Sbjct: 211 TYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPN 243
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 5/245 (2%)
Query: 111 FSTLIKLYGTAGN-FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ ++ +YG G ++ ++E MK G+ P+ TYN L+ R + ++++M
Sbjct: 71 YNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDM 130
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P+ TY +LL YG++R ++ + V REM+ G S+ YN+L++ A G
Sbjct: 131 KSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLL 190
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+EA E+ M + D +T+++M++ GK A +F EM AG +PN+ +
Sbjct: 191 EEAMELKNQM-VERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNA 249
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
LI+ +G + ++++ + PD LL V Q + V V K
Sbjct: 250 LIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNG---MDSEVSGVFKEMK 306
Query: 350 KLGYV 354
++G+V
Sbjct: 307 RVGFV 311
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 1/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++TLI Y G+FD + +Y+ M G+ P++ TYN +L + R Q + I E
Sbjct: 315 DTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAE 374
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D PN T+ SLL AY + L++ E+ ++ L TL+ + +
Sbjct: 375 MQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDL 434
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
EA F ++K + PD T ++MI I R V++ + N M E+GF P+L
Sbjct: 435 LLEAERAFLELK-RKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYN 493
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ + +++ + L + GI PD
Sbjct: 494 SLMYMHSQSENFERSEEVLKEILAKGIKPD 523
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 2/226 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ +I + G G ++ + G +P++ Y +L+ R + ++K+M +
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P TY +L YG+ + ++ ++ MK G+ YNTL+ C +
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +FEDMKS PD T+++++ + ++ EA + EM G P++ SL
Sbjct: 122 EAAAVFEDMKSM-GFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSL 180
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
I Y + ++ + N++ E GI D +L+ +T K+E
Sbjct: 181 ISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDE 226
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ E+K G P++ T N ++ GR + + I M ++G +P+ TY SL+ + +
Sbjct: 442 FLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQ 501
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ E + V +E+ KG++ + YNT++ G EA IF +M+ S PD
Sbjct: 502 SENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRES-GLIPDVI 560
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+++ + + EA + M++ G +PN S+I Y K R DD ++ ++ L
Sbjct: 561 TYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSL 620
Query: 311 PEL 313
EL
Sbjct: 621 HEL 623
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 107/230 (46%), Gaps = 5/230 (2%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+S A + PN + +L+ Y L + EE+ + ++P+ + L
Sbjct: 366 EQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTL 425
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ + + + + E+ G SP+ +T +++ YGR + T + MKE G
Sbjct: 426 VLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGF 485
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEA 268
S+ YN+L+ M + + + E+ +++ + + +PD +++++I CR G++ EA
Sbjct: 486 TPSLATYNSLMYMHSQSENFERSEEVLKEILA-KGIKPDIISYNTVI-FAYCRNGRMKEA 543
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F+EM E+G P++ + + Y ++ + + + + G P+
Sbjct: 544 SHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPN 593
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + + +I +YG + MK G P++ TYN+L+ +++ + + +
Sbjct: 453 DLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVL 512
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KE+ G+ P+ +Y +++ AY R ++ ++ EM+E G+ V YNT +A A
Sbjct: 513 KEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAAD 572
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+EA ++ M C+P+ T++S+I
Sbjct: 573 SMFEEAIDVVCYM-IKHGCKPNQNTYNSVI 601
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++L+ ++ + NF+ V +E+ A G+KP++I+YN ++ R R + I+ EM
Sbjct: 492 YNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMR 551
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++GL P+ TY + + +Y E+ + V M + G + + YN+++ + D
Sbjct: 552 ESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRD 611
Query: 231 EAFEIFEDM 239
+A + +
Sbjct: 612 DAIKFISSL 620
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I Y G +++ EM+ G+ P++ITYN + + + +
Sbjct: 523 DIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVV 582
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
M +G PN NTY S++ Y + +D + + E
Sbjct: 583 CYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSLHE 622
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TLI N + V+ M++ +P++ TYN ++ GR + +
Sbjct: 333 RPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEH 392
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++++ NG SP+ TY SLL A+ + E + EM + G YNT++ M
Sbjct: 393 LFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYG 452
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G DEA ++ DMKSS PD+ T++ +I + K+ EA + +EML+AG +P L
Sbjct: 453 KHGRHDEALRLYRDMKSSGR-NPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTL 511
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++LI Y K R + NR+ E GI D
Sbjct: 512 HTYSALICAYAKVGRRVEAEETFNRMRESGIKAD 545
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 184/421 (43%), Gaps = 8/421 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D F++++KLY + F +Y+ ++ G+ P+ TYN L+ R RP +
Sbjct: 960 FKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGL 1019
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ +M GL P +TY S++ A+ + + + ++ E++ G +L + Y+ ++ M
Sbjct: 1020 SLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMY 1079
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +A + E MK + +P++ T ++ G+ EA+ + + G +
Sbjct: 1080 RTSGDHQKAENLLEIMKEA-GIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLD 1138
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
+S+I Y K + L + E I PD R C + + + + + L+
Sbjct: 1139 TLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLN 1198
Query: 343 CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLE 402
++ L ++LL E+ + + + + + N L+DL L
Sbjct: 1199 ALQAVGFDLP--IRLLGEKSESLVSEVDQCLGRLEHVEDNAAFNFVNALVDLLWAFELRA 1256
Query: 403 NACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA-LESGEE 460
A + +L + +Y DI + W + LS G+AL L +W++ + A L+ E
Sbjct: 1257 TASWVFQLAIKRSIYRHDIFRVAQKDWGADFRKLSAGSALVGLTLWLDHMQDASLQGYPE 1316
Query: 461 FPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESR 520
P + + TG +Y+ L S ++ L E+ +PF + G + + + WL+
Sbjct: 1317 SPKSVVLITGTA--EYNMVSLDSTLKAFLWEMGSPFLPCKTRHGVLVAKAHSLRMWLKDS 1374
Query: 521 S 521
S
Sbjct: 1375 S 1375
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 2/214 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+ + GN + ++ EEM +G + +TYN ++ G+ R + +Y
Sbjct: 405 DAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLY 464
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M +G +P+ TY L+ G+A E+ V EM + G++ ++ Y+ L+ A V
Sbjct: 465 RDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKV 524
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA E F M+ S + D +S M+ ++ +A A++ EM+EAGF P+ +
Sbjct: 525 GRRVEAEETFNRMRES-GIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGL 583
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELG-ITPDD 319
++ + D + R + ELG + P D
Sbjct: 584 YEVMLPALVRENMGDVIERVVQDTKELGSMNPHD 617
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 117/238 (49%), Gaps = 8/238 (3%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
++ ++ +Y GNF+ ++ M+ G +P+++++N L++ + K V + E
Sbjct: 265 QVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLIN--AKVKSCATVSGLAIE 322
Query: 169 MTDN----GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ D GL P+ TY +L+ A R ++ + V+ M+ Q + YN ++++
Sbjct: 323 LLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYG 382
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G+ +A +FE +KS+ PD+ T++S++ S G + + EM++ GF +
Sbjct: 383 RCGFALKAEHLFEKLKSN-GFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDE 441
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLV 341
++I YGK R D+ +R + G PD L++++ + K EE K++
Sbjct: 442 MTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVM 499
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y+ + + + +T++ + G A + ++ + +++ + + YN ++
Sbjct: 217 YECLTMQQWYATNARMVATILSVLGKANQEGIAVEIFAKAESV-IADTVQVYNAMMGVYA 275
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR--ARYGEDTLSVYREMKEKGMQLS 212
R +V ++ M + G P+ ++ +L+ A + A + + E+ + G++
Sbjct: 276 RNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPD 335
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ YNTL++ C+ EA +F M+S+ CQPD WT+++MI++ G +AE +F
Sbjct: 336 IITYNTLISACSRESNLKEAIGVFSHMESNR-CQPDLWTYNAMISVYGRCGFALKAEHLF 394
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++ GF P+ SL+ + K T+ V + ++G D+
Sbjct: 395 EKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDE 441
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 50/214 (23%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ +++D + + ++K+Y T+G+ N+ E MK G++PN T + L+ + G++ +P
Sbjct: 1061 RSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQP 1120
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ I K + G + Y+S++ AY G A+ G + L+ EMKE +
Sbjct: 1121 EEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLT---EMKEAAI------- 1170
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+PD ++ I S G+V++A + N +
Sbjct: 1171 -----------------------------EPDHRIWTCFIRAASLSGEVNDANNLLNALQ 1201
Query: 277 EAGFEPNLFVL----TSLI----QCYGKAQRTDD 302
GF+ + +L SL+ QC G+ + +D
Sbjct: 1202 AVGFDLPIRLLGEKSESLVSEVDQCLGRLEHVED 1235
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D ++ LI Y +G ++ ++ M G P + + N LL + R ++
Sbjct: 821 KMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYV 880
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +E+ D L + ++ +L A+ +A + VY MK G ++ LY ++ +
Sbjct: 881 VIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLC 940
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ + +M + +PD F+S++ + S + ++ + +AG P+
Sbjct: 941 RFKRVRDVRVMLSEMGEA-GFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDE 999
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+LI Y + R ++ + ++++ LG+ P
Sbjct: 1000 ETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEP 1032
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
+I+ YG + ++ E ++ K + +N L+ + + + I+ M G
Sbjct: 795 IIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREG 854
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
SP + LL+A + V +E+++ +++S + +L A G E
Sbjct: 855 PSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQ 914
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
+++ MK++ P + MI + +V + M +EM EAGF+P+L + S+++
Sbjct: 915 KVYNGMKAA-GYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKL 973
Query: 294 YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
Y + ++ + + G+ PD+ L+ + + + E G
Sbjct: 974 YSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEG 1018
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 46/275 (16%), Positives = 106/275 (38%), Gaps = 39/275 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI--YKE 168
+ +LI + FD ++ +M+ GV+P+ Y +++ R P + + + E
Sbjct: 720 YESLIHECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAE 779
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
D L ++ YG+ + + S+ ++++ ++ ++N L+ A G
Sbjct: 780 KNDIILDNVTVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGC 839
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS---------------------- 266
+ A IF M E P + + ++ G++S
Sbjct: 840 YERARAIFNTMM-REGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSIL 898
Query: 267 -------------EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
E + ++N M AG+ P + + +I + +R DV L+ + E
Sbjct: 899 LMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEA 958
Query: 314 GITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKS 347
G PD + +L + + + + +G + + ++ +
Sbjct: 959 GFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDA 993
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 113/212 (53%), Gaps = 2/212 (0%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ ++ LI + + +Y +M G P +ITYN L+D + +A++ + ++
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +NG +P+ TY SL+R + +D LS+++++ KG+++ V ++N L+
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA +F DMK +NC P+ T+++++ G + +A ++ + E G EP++
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ I+ R + ++ L+ + GI P
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 35/247 (14%)
Query: 121 AGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
AG F+ + V++++ K G +PN+ TYN +LD + + R +V +++ M N L P+
Sbjct: 241 AGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI 300
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA-------------- 224
TY L+ R+ + VY E+ + G+ + +YN+L+ C
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA 360
Query: 225 -------------------DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
D G DEA E+++ ++ C PD+ TF ++I G
Sbjct: 361 GFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFA 420
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
++A +F E +G + ++F +S+I R D V+ ++ + G P+ L
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNAL 480
Query: 326 LNVMTQT 332
++ Q
Sbjct: 481 ISGFCQV 487
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 151/325 (46%), Gaps = 18/325 (5%)
Query: 106 IDPNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ + I ++G +G+ DG VY E+ G+ + YN+L+ +A R +
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL---SVTLYNTLL 220
+ GL N TY +++ + ++ + ++ ++ EK + +VT +
Sbjct: 355 KFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIH 412
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+C + G+ ++AF IFE+ + S Q D +++SSMI G++ +A ++ +M + G
Sbjct: 413 GLCQN-GFANKAFTIFEEARVSGK-QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGC 470
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+PN + +LI + + RT D VR +++ + G +P L++ + + K +
Sbjct: 471 KPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASS 530
Query: 341 V--ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNL 398
V E VE G+ + I G F + + SI K + Y +D+ ++
Sbjct: 531 VAREMVEN-----GFTPDITTYGSLIRGLFSDKKIDDALSIWKQI--LYKGLKVDVMMHN 583
Query: 399 NLLENACKLLELGLTLEVYTDIQSR 423
L+ C ++ L V++D++ +
Sbjct: 584 ILIHGLCSAGKVDEALHVFSDMKEK 608
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 113/273 (41%), Gaps = 15/273 (5%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ PN+ TYN +L ++ + T++ + ++P+ TY++L+ + + L
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHAL 213
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
+ EM G+Q V YN LL C G ++ +++ + +P+ T++ M+
Sbjct: 214 DLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ E ++ M+ +P++ LI ++ D R + + + G+ D
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333
Query: 319 DRFCGCLLNVMTQTPK-EELGKLVECVEKSNSK----LGYVVKLLLEEQDIEGDFKKEAT 373
L+ Q + +E K + + + ++K L + ++ EA
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVD-----EAI 388
Query: 374 ELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
EL++ + KDV C+ D L+ C+
Sbjct: 389 ELWDLLEKDVA-----CIPDTVTFGTLIHGLCQ 416
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 104/234 (44%), Gaps = 7/234 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVK 163
R +A ++ + A D L+ + + +I G P + ++N LLD RA+R
Sbjct: 80 RFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDAD 139
Query: 164 TIYKEMTDNG----LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ ++PN TY +LR+ + ++++ ++ + + Y+TL
Sbjct: 140 AFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTL 199
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EA 278
+ A D A ++ ++M S QPD +++++ C G+ + ++++++ +
Sbjct: 200 MCGLAKQDRLDHALDLLDEMPRS-GVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
G PNL ++ K R +V R+ + PD G L++ + ++
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRS 312
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK-AIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++D + LI +AG D L+V+ +MK PN++TYN L+D + +
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
T++ +T++GL P+ +Y + ++ + + + E+ +G+ +V +N L+
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + +I +Y AGN++ V+ M GV + +TYN+L+ K +V IY
Sbjct: 246 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIY 302
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + + P+ +YA L++AYGRAR E+ LSV+ EM + G++ + YN LL A
Sbjct: 303 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 362
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +F+ M+ + PD W++++M++ + AE F + GFEPN+
Sbjct: 363 GMVEQAKTVFKSMRR-DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+LI+ Y KA + ++ ++ GI + +++
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F LI YG GNF+G V + +G PN+I+Y L+++ GR + +
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
I++ M +G P+ TY +L+ + + + E+ + K+ ++ +Y+ ++
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
M G ++A ++F M + + T++S+++ + +VS+ ++++M +
Sbjct: 255 YMYKKAGNYEKARKVFSSM-VGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDI 310
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+P++ LI+ YG+A+R ++ + + + G+ P + LL+ + E K
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 370
Query: 341 V 341
V
Sbjct: 371 V 371
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 45/297 (15%)
Query: 74 PKSYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLN 129
P+S + N + KE K YD R++ I P+ +++ LIK YG A + L+
Sbjct: 279 PQSTVTYNSLMSFETSYKEVSKIYDQMQRSD---IQPDVVSYALLIKAYGRARREEEALS 335
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+EEM GV+P YN LLD + Q KT++K M + + P+ +Y ++L AY
Sbjct: 336 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYV 395
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
A E ++ +K G + ++ Y TL+ A ++ E++E M+ S
Sbjct: 396 NASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLS------- 448
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
G + N +LT+++ G+ + +
Sbjct: 449 -----------------------------GIKANQTILTTIMDASGRCKNFGSALGWYKE 479
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEG 366
+ G+ PD + LL++ + ++EL + E N + ++ + D EG
Sbjct: 480 MESCGVPPDQKAKNVLLSL--ASTQDELEEAKELTGIRNETATIIARVYGSDDDEEG 534
>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
Length = 638
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 182/433 (42%), Gaps = 48/433 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ L+ LYG G FDG ++ EM+ V P+ TYN L G +V ++ +M
Sbjct: 129 YRVLLDLYGRQGRFDGVRELFREMRT-AVPPDTATYNVLFRVYGDGGFFKEVVELFHDML 187
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ P+ T +++ A GR ED V M +GM + Y L+ +
Sbjct: 188 ETGVEPDMVTCENVMAACGRGGLHEDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYE 247
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFVLTS 289
EA+ F +M + P T++++ + G EAEA+F+ M AG + N +
Sbjct: 248 EAYVAF-NMMTEIGSLPTLETYNTLAFAYARGGLFQEAEAIFSRMSNNAGIQKNKDSFDA 306
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKLVECV 344
LI+ Y + + DD V+A + + PD+R +LN + KE+ +L V
Sbjct: 307 LIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSV 366
Query: 345 ---------------------------------EKSNSKLGYVVKLLLEEQDIEGDFKKE 371
+++S + L+ E D +++
Sbjct: 367 TLPSIIAYCMMLSLYARNDRWADAYDMLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMV 426
Query: 372 ATELFNSISK--DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWS 429
L NS + D + N L+D+ A ++L+ + ++ ++ + WS
Sbjct: 427 EYALENSTMEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQAVQFGLFPELYRDTKLVWS 486
Query: 430 LHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS--DKGL--ASVF 485
L + +S+G AL A+ +W+N L L E+ P L + G+ + S +GL A V
Sbjct: 487 LDVHRMSVGGALVAVSVWLNKLYDRLVEDEDLPQLASVVVLRGEMEKSTITRGLPTAKVV 546
Query: 486 ESHLKE-LNAPFH 497
S L + L+A FH
Sbjct: 547 YSFLNDTLSASFH 559
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 3/222 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TL+ D + M GV P+ ++Y ++D A +V
Sbjct: 18 RPDLTTYNTLLAAAAVRSLADQSEMLLRTMLEAGVSPDTVSYRYIVDAFASAGNLSRVAE 77
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM G + + + Y L+ A+ R + ++V R+M+ G + Y LL +
Sbjct: 78 LFSEMAVMGNTADASAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYG 137
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D E+F +M+++ PD+ T++ + + G E +F++MLE G EP++
Sbjct: 138 RQGRFDGVRELFREMRTA--VPPDTATYNVLFRVYGDGGFFKEVVELFHDMLETGVEPDM 195
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCL 325
+++ G+ +D L + G+ P D + G +
Sbjct: 196 VTCENVMAACGRGGLHEDAREVLEYMTREGMVPTADAYTGLV 237
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 128 LNVYEEMK---AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
L ++ EM+ + V+P++ TYN LL Q + + + M + G+SP+ +Y +
Sbjct: 3 LGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLRTMLEAGVSPDTVSYRYI 62
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ A+ A ++ EM G + Y L+ VG T EA + M+ ++
Sbjct: 63 VDAFASAGNLSRVAELFSEMAVMGNTADASAYLGLMEAHTRVGATAEAVAVLRQMQ-ADG 121
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
C P + T+ ++ + +G+ +F EM A P+ L + YG +VV
Sbjct: 122 CAPTAATYRVLLDLYGRQGRFDGVRELFREMRTA-VPPDTATYNVLFRVYGDGGFFKEVV 180
Query: 305 RALNRLPELGITPDDRFC 322
+ + E G+ PD C
Sbjct: 181 ELFHDMLETGVEPDMVTC 198
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 113/212 (53%), Gaps = 2/212 (0%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ ++ LI + + +Y +M G P +ITYN L+D + +A++ + ++
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSV 531
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +NG +P+ TY SL+R + +D LS+++++ KG+++ V ++N L+
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA +F DMK +NC P+ T+++++ G + +A ++ + E G EP++
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ I+ R + ++ L+ + GI P
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIP 683
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
R+ P+ ++ L+ AG F+ + V++++ K G +PN+ TYN +LD + + R +
Sbjct: 223 RVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKE 282
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL- 220
V +++ M N L P+ TY L+ R+ + VY E+ + G+ + +YN+L+
Sbjct: 283 VGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVK 342
Query: 221 AMCA---------------------------------DVGYTDEAFEIFEDMKSSENCQP 247
C D G DEA E+++ ++ C P
Sbjct: 343 GFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIP 402
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D+ TF ++I G ++A +F E +G + ++F +S+I R D V+
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY 462
Query: 308 NRLPELGITPDDRFCGCLLNVMTQT 332
++ + G P+ L++ Q
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQV 487
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 112/258 (43%), Gaps = 38/258 (14%)
Query: 106 IDPNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPW 160
+ P+ + I ++G +G+ DG VY E+ G+ + YN+L+ GR + W
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAW 354
Query: 161 QV---------------KTIYKEMTDNGLS-----------------PNWNTYASLLRAY 188
+ + K + D+G+ P+ T+ +L+
Sbjct: 355 KFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGL 414
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ + +++ E + G QL V Y++++ +VG +A +++E M + C+P+
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM-DKDGCKPN 473
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
S ++++I+ + S+A ++++M + G P + +LI KA++ +
Sbjct: 474 SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAR 533
Query: 309 RLPELGITPDDRFCGCLL 326
+ E G TPD G L+
Sbjct: 534 EMVENGFTPDITTYGSLI 551
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 3/207 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F TLI G + ++EE + G + ++ +Y+++++ + R +Y
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY 462
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
++M +G PN + Y +L+ + + D + +Y +M + G +V YNTL+ +C
Sbjct: 463 EKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKA 522
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
Y EA + +M + PD T+ S+I K+ +A +++ ++L G + ++
Sbjct: 523 EKY-QEASSVAREMVEN-GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVM 580
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ LI A + D+ + + + E
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMKE 607
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 112/273 (41%), Gaps = 15/273 (5%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ PN+ TYN +L ++ + T++ + ++P+ TY++L+ + + L
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHAL 213
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
+ EM +Q V YN LL C G ++ +++ + +P+ T++ M+
Sbjct: 214 DLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ E ++ M+ +P++ LI ++ D R + + + G+ D
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333
Query: 319 DRFCGCLLNVMTQTPK-EELGKLVECVEKSNSK----LGYVVKLLLEEQDIEGDFKKEAT 373
L+ Q + +E K + + + ++K L + ++ EA
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVD-----EAI 388
Query: 374 ELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
EL++ + KDV C+ D L+ C+
Sbjct: 389 ELWDLLEKDVA-----CIPDTVTFGTLIHGLCQ 416
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 104/234 (44%), Gaps = 7/234 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVK 163
R +A ++ + A D L+ + + +I G P + ++N LLD RA+R
Sbjct: 80 RFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDAD 139
Query: 164 TIYKEMTDNG----LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ ++PN TY +LR+ + ++++ ++ + + Y+TL
Sbjct: 140 AFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTL 199
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EA 278
+ A D A ++ ++M S QPD +++++ C G+ + ++++++ +
Sbjct: 200 MCGLAKQDRLDHALDLLDEMPRSR-VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
G PNL ++ K R +V R+ + PD G L++ + ++
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRS 312
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK-AIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++D + LI +AG D L+V+ +MK PN++TYN L+D + +
Sbjct: 576 KVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAA 635
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
T++ +T++GL P+ +Y + ++ + + + E+ +G+ +V +N L+
Sbjct: 636 TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 123/238 (51%), Gaps = 6/238 (2%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++++T +EK + P+ F +I +Y AGN++ ++ M+ GV + +TYN+L
Sbjct: 230 EETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSL 289
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ K +V Y +M GL P+ +YA L+ AYG+AR E+ L+V+ EM + G+
Sbjct: 290 MSFETNYK---EVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 346
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ + YN LL A G D+A +F+ M+ + C PD ++++M++ + AE
Sbjct: 347 RPTHKAYNILLDAFAISGMVDQARTVFKSMRR-DRCTPDICSYTTMLSAYVNASDMEGAE 405
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
F + + GFEPN+ +LI+ Y K + ++ + GI + +++
Sbjct: 406 KFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMD 463
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F L+ YG G+F+ V+ +M G P++I++ L++ G+ K+ + +
Sbjct: 136 WDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEAYGKGKQYNKAE 195
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++++ M +G P+ TY +L+ + + + E+T + ++ ++ +++ ++
Sbjct: 196 SVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMI 255
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDS-WTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
M G ++A +IF M+ E P S T++S+++ + +VS+ +++M AG
Sbjct: 256 YMYRKAGNYEKARKIFGLMR--ERGVPQSTVTYNSLMSFETNYKEVSKT---YDQMQRAG 310
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
P++ LI YGKA+R ++ + + + G+ P + LL+
Sbjct: 311 LRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 358
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 113/271 (41%), Gaps = 40/271 (14%)
Query: 74 PKSYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVY 131
P+S + N + KE K+YD R R D +++ LI YG A + L V+
Sbjct: 280 PQSTVTYNSLMSFETNYKEVSKTYDQMQR-AGLRPDVVSYALLINAYGKARREEEALAVF 338
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
EEM GV+P YN LLD + Q +T++K M + +P+ +Y ++L AY A
Sbjct: 339 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNA 398
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
E +R +K+ G + +V Y TL+ A + ++ E +E+M+
Sbjct: 399 SDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVH--------- 449
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
G + N + T+++ YGK + V +
Sbjct: 450 ---------------------------GIKANQAIYTAMMDAYGKNKDFGSAVFWFKEMG 482
Query: 312 ELGITPDDRFCGCLLNVM-TQTPKEELGKLV 341
G+ PD + LL++ T+ KEE LV
Sbjct: 483 FCGVPPDRKATNILLSLAKTEAEKEEANLLV 513
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R ++ D +++T++ Y A + +G + +K G +PN++TY L+ +
Sbjct: 377 RRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNL 436
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ Y+EM +G+ N Y +++ AYG+ + + ++EM G+ N L
Sbjct: 437 EKMMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGVPPDRKATNIL 496
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
L++ +EA + N Q D+ +F
Sbjct: 497 LSLAKTEAEKEEANLLVGYSSKYSNGQMDNGSF 529
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI G V++EMKA G +P+ +T+N+LLD G+A++ + +
Sbjct: 254 DRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVL 313
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + G +P+ TY SL+ AY + E+ L + +EM+ +GM+ V Y TL++ V
Sbjct: 314 KRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRV 373
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A + +M + C P+ T++++I + RGK +E A+F+++ AG+ P++
Sbjct: 374 GKIDAALATYSEMVRN-GCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVT 432
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ +G+ +V + + G P+
Sbjct: 433 WNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPE 464
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 40/284 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW------ 160
D +A++ L+ + AG F + V++ M GV+P ++TYN + + PW
Sbjct: 183 DASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVAL 242
Query: 161 ------------------------------QVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ ++ EM G P+ T+ SLL YG+
Sbjct: 243 VDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGK 302
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
AR E+ + V + M+ G SV YN+L++ G +EA E+ ++M+ +PD
Sbjct: 303 ARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEME-FRGMKPDVV 361
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++++I+ GK+ A A ++EM+ G PNL +LI+ +G + +++ + L
Sbjct: 362 TYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDL 421
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
G PD LL+V Q L V V K K GY+
Sbjct: 422 RSAGYVPDVVTWNTLLSVFGQN---GLDSEVSGVFKEMKKAGYI 462
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 114/224 (50%), Gaps = 10/224 (4%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LIKL+G G F + V++++++ G P+++T+N LL G+ +V +
Sbjct: 393 PNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGV 452
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM G P +TY SL+ +Y R + + +Y+ M E G+ ++ YN +L+ A
Sbjct: 453 FKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALAR 512
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A ++F +M +C+PD ++SS++ + K+ + + + ++ E + +
Sbjct: 513 GGRWEQAEKLFAEM-VDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNW 571
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++ +L+ K + +A L R C +NV+
Sbjct: 572 LVKTLVLVNNKVNNLPETEKAFQELRR-------RRCSLDINVL 608
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI G D L Y EM G PN+ TYN L+ G + ++ ++
Sbjct: 359 DVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVF 418
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ G P+ T+ +LL +G+ + V++EMK+ G Y +L++ +
Sbjct: 419 DDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 478
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A EI++ M + PD T++++++ + G+ +AE +F EM++ +P+
Sbjct: 479 GLFDQAMEIYKRMIEA-GIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELS 537
Query: 287 LTSLIQCYGKAQRTD 301
+SL+ Y A++ D
Sbjct: 538 YSSLLHAYANAKKLD 552
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P T I+++ AG CL + P+ Y L+ RA R +++
Sbjct: 153 PRVLPTAIRVFARAG----CLAEASAILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQ 208
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M D G+ P TY + AY + ++ +++ MKE G++ YNTL++ C
Sbjct: 209 RMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRR 268
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F++MK++ +PD TF+S++ + K EA + M AG P++
Sbjct: 269 GLHREAAQVFDEMKAA-GFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVT 327
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI Y K ++ + + G+ PD
Sbjct: 328 YNSLISAYVKDGLLEEALELKQEMEFRGMKPD 359
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 106/245 (43%), Gaps = 36/245 (14%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + +LI Y G FD + +Y+ M G+ P++ TYN +L + R R Q + ++ E
Sbjct: 466 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAE 525
Query: 169 MTDNGLSPNWNTYASLLRAYGRAR------------YGE--------------------- 195
M D P+ +Y+SLL AY A+ Y E
Sbjct: 526 MVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNN 585
Query: 196 --DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+T ++E++ + L + + N ++++ + E+ M + + + T++
Sbjct: 586 LPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMEN-SINHSAATYN 644
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
S++ + S G + E++ E+ +G P+ + ++I YG+ + + R + +
Sbjct: 645 SLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 704
Query: 314 GITPD 318
G+ PD
Sbjct: 705 GVKPD 709
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D ++TL+ ++G G V++EMK G P TY +L+ + R
Sbjct: 422 RSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 481
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q IYK M + G+ P+ +TY ++L A R E ++ EM ++ + Y++L
Sbjct: 482 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSL 541
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L A+ D+ + ED+ +E + +W +++ + + + E E F E+
Sbjct: 542 LHAYANAKKLDKMKTLSEDI-YAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRR 600
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
++ VL +++ YGK + V L+ + E I
Sbjct: 601 CSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSI 636
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 8/233 (3%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
L E Y R W + TL+ + N ++E++ ++ N +
Sbjct: 557 LSEDIYAERIERHNWLV-----KTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAM 611
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ G+ K +V+ + M +N ++ + TY SL+ Y R E S+ E+K GM
Sbjct: 612 VSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGM 671
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ YNT++ G EA +F +MK S +PD T++ I EA
Sbjct: 672 RPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GVKPDIVTYNIFIKSYVANIMFEEAI 730
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL--GITPDDR 320
+ ++ G PN S++Q Y + R + L+ LP++ GI+ ++
Sbjct: 731 DLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLPKIYPGISKQEK 783
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 117/272 (43%), Gaps = 41/272 (15%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR-------- 158
D + ++ ++ G ++ ++ EM KP+ ++Y++LL AK+
Sbjct: 499 DISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLS 558
Query: 159 -----------PWQVKTI----------------YKEMTDNGLSPNWNTYASLLRAYGRA 191
W VKT+ ++E+ S + N +++ YG+
Sbjct: 559 EDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKN 618
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ + V M E + S YN+L+ M + +G ++ I ++KSS +PD ++
Sbjct: 619 KMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSS-GMRPDRYS 677
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I +G++ EA +F+EM +G +P++ I+ Y ++ + + L
Sbjct: 678 YNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLV 737
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
G P++R +L ++ G++VE
Sbjct: 738 TQGCRPNERTFNSILQGYSRH-----GRMVEA 764
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KWR P+ ++ LI +G AG + N+ E+M + P+ T+NNL++ G
Sbjct: 57 QKWRCKPDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNW 116
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MTDNG+ P+ T+ +L AY LS + MK ++ T N +
Sbjct: 117 REALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIV 176
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ V +A EIF M+ + C+PD TF+S+I + S RG++ + +A+F+ ML
Sbjct: 177 IHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAE 236
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +PN+ +LI Y + + + G PD
Sbjct: 237 GIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPD 276
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 133/325 (40%), Gaps = 72/325 (22%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN---------- 147
R + + R D F+++I LY G + C V+ M A G+KPN+++YN
Sbjct: 197 REKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHG 256
Query: 148 -------------------------NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
+L+ T GR+++P + + ++ M N PN +Y
Sbjct: 257 MDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYN 316
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA------------------ 224
+L+ AYG Y + + REM++ G+ +V TLLA C
Sbjct: 317 ALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELR 376
Query: 225 -----------------DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
++G ++A ++ M+ ++ +PDS TF+ +I+ C K E
Sbjct: 377 GIHLNTIACNSAIGSYMNIGEYEKAINLYRSME-NKTTKPDSVTFTILISGCCRMSKYEE 435
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
A F EML+ + + +S+I Y K + N L G PD ++N
Sbjct: 436 ALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMIN 495
Query: 328 VMTQTPK-EELGKLVECVEKSNSKL 351
+ + E++ L + +E +N +L
Sbjct: 496 AYSASEMWEKVCALYQEMEANNIQL 520
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 3/209 (1%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ ++ Y + + L+ +E MK ++P+ T N ++ + + K+ Q I+ M +
Sbjct: 139 NIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMRE 198
Query: 172 --NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ P+ T+ S++ Y ED +V+ M +G++ ++ YN L++ A G
Sbjct: 199 KRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMD 258
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EAF +F++MK S C PD +++S+I+ + + A +F+ M +PNL +
Sbjct: 259 KEAFSVFDEMKRSGFC-PDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNA 317
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ YG V L + + GI P+
Sbjct: 318 LMDAYGSNGYLPQAVDILREMEQDGIHPN 346
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 93/241 (38%), Gaps = 38/241 (15%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A ++ I Y G ++ +N+Y M+ KP+ +T+ L+ R + + +KEM
Sbjct: 384 ACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEM 443
Query: 170 TD-----------------------------------NGLSPNWNTYASLLRAYGRARYG 194
D +G P+ TY +++ AY +
Sbjct: 444 LDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMW 503
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP-DSWTFS 253
E ++Y+EM+ +QL + L+ + E MK E P + F
Sbjct: 504 EKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMK--EKGIPFNDANFF 561
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
M++ CS +A + N M + +L + L+Q GK+ +T+ +++ R L
Sbjct: 562 EMLSACSILRDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVAL 621
Query: 314 G 314
G
Sbjct: 622 G 622
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 164/328 (50%), Gaps = 19/328 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI YG G+ + +++ EMK +G P++ITYN L++ + ++ + +
Sbjct: 323 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 382
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +NGL PN TY++L+ A+ + + + ++ +M+ G+ + Y +L+
Sbjct: 383 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKA 442
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA+++ DM + + + T+++++ G++ EAE +F ML+ G PN V
Sbjct: 443 GNLTEAWKLLNDMLQA-GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 501
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
T+L+ Y KA+R +D ++ L ++ E I PD G ++ K E KL+ +E+
Sbjct: 502 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI--LEE 559
Query: 347 SNSKLGYVVKLLLEEQDIEGDFK----KEATELFNSISKDVKKA----YCNCLIDLCVNL 398
S+ G ++ I+ FK +A F + +A YC LID
Sbjct: 560 MKSR-GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC-VLIDGLCKA 617
Query: 399 NLLENA----CKLLELGL--TLEVYTDI 420
++E A C++L LGL + VYT +
Sbjct: 618 GIVELAVDYFCRMLSLGLQPNVAVYTSL 645
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 154/342 (45%), Gaps = 20/342 (5%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L E++ + +R +R P A S L+ +GN + +M G+ P++ TYN
Sbjct: 234 LLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYN 293
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
++D + + + ++ +M + GLSP+ TY SL+ YG+ E+ S++ EMK+
Sbjct: 294 VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV 353
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G + YN L+ AFE F +MK++ +P+ T+S++I G +
Sbjct: 354 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN-GLKPNVVTYSTLIDAFCKEGMMQG 412
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
A +F +M G PN F TSLI KA + + LN + + G+ LN
Sbjct: 413 AIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK---------LN 463
Query: 328 VMTQTPKEE----LGKLVECVEKSNSKL--GYVVKLLLEEQDIEGDFKKEATELFNSISK 381
++T T + G+++E E S L G + + G K E E I K
Sbjct: 464 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 523
Query: 382 DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSR 423
+ + CN DL + +++ C +L T + +++SR
Sbjct: 524 QMTE--CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 563
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P +T+I Y AG LN ++EM+ +GV+ ++TY L+D + +A +
Sbjct: 568 NPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYF 627
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M GL PN Y SL+ + E ++ EM+ +GM +T + L+
Sbjct: 628 CRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 687
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA + M + + D ++S+++ S G++ +A FNEM+E G P +
Sbjct: 688 GNLQEALVLISRM-TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVL 746
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L++ Y K + D+ + N + +G+ +
Sbjct: 747 CICLLREYYKRGQLDEAIELKNEMERMGLITE 778
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 6/219 (2%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ EEMK+ G+ N + ++D +A + ++EM D G+ TY L+
Sbjct: 556 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 615
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+A E + + M G+Q +V +Y +L+ + A ++F++M+ PD
Sbjct: 616 KAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQ-CRGMTPDI 674
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
F+++I G + EA + + M E E +L V TSL+ + + + N
Sbjct: 675 TAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 734
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
+ E GI P++ C CLL + G+L E +E N
Sbjct: 735 MIEKGILPEEVLCICLLREYYKR-----GQLDEAIELKN 768
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + +I +Y AGN++ V+ M GV + +TYN+L+ K +V IY
Sbjct: 189 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIY 245
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + + P+ +YA L++AYGRAR E+ LSV+ EM + G++ + YN LL A
Sbjct: 246 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 305
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +F+ M+ + PD W++++M++ + AE F + GFEPN+
Sbjct: 306 GMVEQAKTVFKSMRR-DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 364
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+LI+ Y KA + ++ ++ GI + +++
Sbjct: 365 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 405
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F LI YG GNF+G V + +G PN+I+Y L+++ GR + +
Sbjct: 78 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 137
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
I++ M +G P+ TY +L+ + + + E+ + K+ ++ +Y+ ++
Sbjct: 138 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 197
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
M G ++A ++F M + + T++S+++ + +VS+ ++++M +
Sbjct: 198 YMYKKAGNYEKARKVFSSM-VGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDI 253
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+P++ LI+ YG+A+R ++ + + + G+ P + LL+ + E K
Sbjct: 254 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 313
Query: 341 V 341
V
Sbjct: 314 V 314
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 45/297 (15%)
Query: 74 PKSYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLN 129
P+S + N + KE K YD R++ I P+ +++ LIK YG A + L+
Sbjct: 222 PQSTVTYNSLMSFETSYKEVSKIYDQMQRSD---IQPDVVSYALLIKAYGRARREEEALS 278
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+EEM GV+P YN LLD + Q KT++K M + + P+ +Y ++L AY
Sbjct: 279 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYV 338
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
A E ++ +K G + ++ Y TL+ A ++ E++E M+ S
Sbjct: 339 NASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLS------- 391
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
G + N +LT+++ G+ + +
Sbjct: 392 -----------------------------GIKANQTILTTIMDASGRCKNFGSALGWYKE 422
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEG 366
+ G+ PD + LL++ + ++EL + E N + ++ + D EG
Sbjct: 423 MESCGVPPDQKAKNVLLSL--ASTQDELEEAKELTGIRNETATIIARVYGSDDDEEG 477
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 116/213 (54%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++TLI G + +++EMKA G +P+ +T+N+LLD G+A+R + +
Sbjct: 254 LDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGV 313
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K+M + G +P+ TY SL+ AY + E+ L + +EM+ +GM+ V Y TL++
Sbjct: 314 LKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDR 373
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G D A + +M + C P+ T++++I + RGK +E +F+++ AG+ P++
Sbjct: 374 IGKIDAALATYSEMVRN-GCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVV 432
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ +G+ +V + + G P+
Sbjct: 433 TWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPE 465
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 40/284 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW------ 160
D +A++ L+ + AG F + V+ M GV+P ++TYN +L + PW
Sbjct: 184 DASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVL 243
Query: 161 ------------------------------QVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ ++ EM G P+ T+ SLL YG+
Sbjct: 244 VDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGK 303
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
AR E+ + V ++M+ G SV YN+L++ G +EA E+ ++M+ +PD
Sbjct: 304 ARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEME-FRGMKPDVV 362
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++++I+ GK+ A A ++EM+ G PNL +LI+ +G + +++ + L
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
G PD LL V Q L V V K K GY+
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQN---GLDSEVSGVFKEMKKAGYI 463
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LIK++G G F + V++++++ G P+++T+N LL G+ +V +
Sbjct: 394 PNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGV 453
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM G P +TY SL+ +Y R + + +Y+ M E G+ ++ YN +L+ A
Sbjct: 454 FKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALAR 513
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A ++F +M+ +C+PD ++SS++ + K+ + +A+ ++ EP+ +
Sbjct: 514 GGRWVQAEKLFAEME-DRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNW 572
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++ +L+ K + +A L R C +NV+
Sbjct: 573 LVKTLVLVNNKVNSLSETEKAFQELRR-------RRCSLDINVL 609
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+P+ + Y +L+ + RA D ++V+R M + G+Q ++ YN +L + + + +
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVV 241
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+ D + + D +T++++I+ C RG EA MF+EM AGFEP+ SL+ Y
Sbjct: 242 VLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301
Query: 295 GKAQRTDDVVRALNRLPELGITP 317
GKA+R ++ + L ++ G TP
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTP 324
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI G D L Y EM G PN+ TYN L+ G + ++ ++
Sbjct: 360 DVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVF 419
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ G P+ T+ +LL +G+ + V++EMK+ G Y +L++ +
Sbjct: 420 DDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 479
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A EI++ M + PD T++++++ + G+ +AE +F EM + +P+
Sbjct: 480 GLFDQAMEIYKRMIEA-GIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELS 538
Query: 287 LTSLIQCYGKAQRTD 301
+SL+ Y A++ D
Sbjct: 539 YSSLLHAYANAKKLD 553
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + +LI Y G FD + +Y+ M G+ P++ TYN +L + R R Q + ++ E
Sbjct: 467 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAE 526
Query: 169 MTDNGLSPNWNTYASLLRAYGRAR------------YGE--------------------- 195
M D P+ +Y+SLL AY A+ Y +
Sbjct: 527 MEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNS 586
Query: 196 --DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+T ++E++ + L + + N ++++ + E+ MK + + + T++
Sbjct: 587 LSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKEN-SINHSAATYN 645
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
S++ + S G + EA+ E+ +G P+ + ++I YG+ + + R + +
Sbjct: 646 SLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 705
Query: 314 GITPD 318
G+ PD
Sbjct: 706 GVKPD 710
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 1/216 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D ++TL+ ++G G V++EMK G P TY +L+ + R
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 482
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q IYK M + G+ P+ +TY ++L A R ++ EM+++ + Y++L
Sbjct: 483 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSL 542
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L A+ D+ + ED+ ++ +P +W +++ + + +SE E F E+
Sbjct: 543 LHAYANAKKLDKMKALSEDI-YAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRR 601
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
++ VL +++ YGK + V L + E I
Sbjct: 602 CSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSI 637
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 109/226 (48%), Gaps = 13/226 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN------MITYNNLLDTMGRAKRPW 160
D ++S+L+ Y A D + E++ A ++P+ ++ NN ++++ ++ +
Sbjct: 535 DELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAF 594
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q E+ S + N +++ YG+ + + V MKE + S YN+L+
Sbjct: 595 Q------ELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLM 648
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
M + +G ++ I ++KSS +PD ++++++I +G++ EA +F+EM +G
Sbjct: 649 HMYSRLGDCEKCEAILTEIKSS-GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGV 707
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+P++ I+ Y ++ + + L G P++R +L
Sbjct: 708 KPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSIL 753
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 107/236 (45%), Gaps = 9/236 (3%)
Query: 89 KLKEKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K+K S D A+ RI+P+ + TL+ + + ++E++ ++
Sbjct: 554 KMKALSEDIYAQ----RIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVL 609
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N ++ G+ K +V+ + M +N ++ + TY SL+ Y R E ++ E+K
Sbjct: 610 NAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKS 669
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
GM+ YNT++ G EA +F +MK S +PD T++ I
Sbjct: 670 SGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GVKPDIVTYNIFIKSYVANLMFE 728
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL--GITPDDR 320
EA + ++ G +PN S+++ Y + R + L+ LP++ GI+ +++
Sbjct: 729 EAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPKIYPGISKEEK 784
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + +I +Y AGN++ V+ M GV + +TYN+L+ K +V IY
Sbjct: 253 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIY 309
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + + P+ +YA L++AYGRAR E+ LSV+ EM + G++ + YN LL A
Sbjct: 310 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 369
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +F+ M+ + PD W++++M++ + AE F + GFEPN+
Sbjct: 370 GMVEQAKTVFKSMRR-DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+LI+ Y KA + ++ ++ GI + +++
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F LI YG GNF+G V + +G PN+I+Y L+++ GR + +
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
I++ M +G P+ TY +L+ + + + E+ + K+ ++ +Y+ ++
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
M G ++A ++F M + + T++S+++ + +VS+ ++++M +
Sbjct: 262 YMYKKAGNYEKARKVFSSM-VGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDI 317
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+P++ LI+ YG+A+R ++ + + + G+ P + LL+ + E K
Sbjct: 318 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 377
Query: 341 V 341
V
Sbjct: 378 V 378
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 45/297 (15%)
Query: 74 PKSYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLN 129
P+S + N + KE K YD R++ I P+ +++ LIK YG A + L+
Sbjct: 286 PQSTVTYNSLMSFETSYKEVSKIYDQMQRSD---IQPDVVSYALLIKAYGRARREEEALS 342
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+EEM GV+P YN LLD + Q KT++K M + + P+ +Y ++L AY
Sbjct: 343 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYV 402
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
A E ++ +K G + ++ Y TL+ A ++ E++E M+ S
Sbjct: 403 NASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLS------- 455
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
G + N +LT+++ G+ + +
Sbjct: 456 -----------------------------GIKANQTILTTIMDASGRCKNFGSALGWYKE 486
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEG 366
+ G+ PD + LL++ + ++EL + E N + ++ + D EG
Sbjct: 487 MESCGVPPDQKAKNVLLSL--ASTQDELEEAKELTGIRNETATIIARVYGSDDDEEG 541
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVK 163
R+D A++T++ AG ++ L ++ E++ GV P ++TYN +LD GR R W ++
Sbjct: 177 RLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIV 236
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM G+ P+ T ++++ A GR + ++ + ++K +G V YN LL +
Sbjct: 237 ALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVF 296
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + ++M+ S CQPD+ T++ + + G EA + M G PN
Sbjct: 297 GKAGNYTEALRVLKEMEDS-GCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPN 355
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F +++ Y R D+ + +R+ + G P+
Sbjct: 356 TFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPN 390
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 3/212 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ F ST+I G G D + +E++KA G P ++TYN LL G+A +
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 306
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ KEM D+G P+ TY L Y RA + E+ M KG+ + YNT++
Sbjct: 307 RVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAY 366
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A+VG DEA +F+ MK + P+ T++ + + + + + M EM +G PN
Sbjct: 367 ANVGRVDEALALFDRMKKN-GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+++ GK D V R LN + G+
Sbjct: 426 RVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGV 457
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AGN+ L V +EM+ G +P+ +TYN L T RA + MT
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL PN TY +++ AY ++ L+++ MK+ G +V YN + M
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 408
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E+ E+M S C P+ T+++M+ +C RG + N M G E + +L
Sbjct: 409 AMLEMLEEMSRS-GCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTL 467
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ + + + G TP LLNV+++
Sbjct: 468 ISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSR 508
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ T++ Y G D L +++ MK G PN+ TYN + +G+ R + +
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM+ +G +PN T+ ++L G+ + V MK G++LS YNTL++
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGR 473
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G AF+++++M SS P T+++++ + S +G S A+++ ++ML+ GF+PN
Sbjct: 474 CGSRTYAFKMYDEMISS-GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQ 532
Query: 286 VLTSLIQCYGKA 297
+ L+QCY K
Sbjct: 533 SYSLLLQCYAKG 544
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 110/209 (52%), Gaps = 2/209 (0%)
Query: 111 FSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ ++ +YG G ++ + + EEM+A GV+P+ T + ++ GR Q ++++
Sbjct: 218 YNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDL 277
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P TY +LL+ +G+A + L V +EM++ G Q YN L A G+
Sbjct: 278 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFF 337
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+EA + + M +S+ P+++T+++++T + G+V EA A+F+ M + G+ PN+
Sbjct: 338 EEAAKCLDTM-TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNL 396
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ GK R ++ L + G TP+
Sbjct: 397 IFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNE----KWRIDPNAFSTLIKLYGTAGNF 124
++G +P W N K + Y TR N + + ++TLI YG G+
Sbjct: 419 RSGCTPNRVTW-NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 477
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+Y+EM + G P + TYN LL+ + R ++I +M NG PN +Y+ L
Sbjct: 478 TYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLL 537
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
L+ Y + S+ +E+ + S + TL+ + + F+++K ++
Sbjct: 538 LQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVK-AQG 596
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+PD F+SM+ + + G S+A MF+ + ++G P+L SL+ Y K+ + +
Sbjct: 597 YKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAE 656
Query: 305 RALNRLPELGITPD 318
+ L +L + PD
Sbjct: 657 KILKQLKSSQVKPD 670
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
++ + N K R +++ + +A+ ++ D F++++ +Y G + +++ +
Sbjct: 570 RTLVIANFKCRRLEGVEKAFQEVKAQG--YKPDLVIFNSMLAMYAKNGLYSKATEMFDSI 627
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G+ P++ITYN+L+D ++ W+ + I K++ + + P+ +Y +++ + +
Sbjct: 628 KQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLI 687
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ + EM GM V Y+TL+ A + +EA E+ M N +P T+
Sbjct: 688 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM-IHHNLKPMELTYRR 746
Query: 255 MI-TICSCRGKVSEAEAMFNEM 275
++ + C + + EA +E+
Sbjct: 747 VVDSYCKAK-RYDEAREFLSEI 767
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVK 163
R+D A++T++ AG ++ L ++ E++ GV P ++TYN +LD GR R W ++
Sbjct: 177 RLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIV 236
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM G+ P+ T ++++ A GR + ++ + ++K +G V YN LL +
Sbjct: 237 ALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVF 296
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + ++M+ S CQPD+ T++ + + G EA + M G PN
Sbjct: 297 GKAGNYTEALRVLKEMEDS-GCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPN 355
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F +++ Y R D+ + +R+ + G P+
Sbjct: 356 TFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPN 390
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 3/212 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ F ST+I G G D + +E++KA G P ++TYN LL G+A +
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 306
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ KEM D+G P+ TY L Y RA + E+ M KG+ + YNT++
Sbjct: 307 RVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAY 366
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A+VG DEA +F+ MK + P+ T++ + + + + + M EM +G PN
Sbjct: 367 ANVGRVDEALALFDRMKKN-GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+++ GK D V R LN + G+
Sbjct: 426 RVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGV 457
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AGN+ L V +EM+ G +P+ +TYN L T RA + MT
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL PN TY +++ AY ++ L+++ MK+ G +V YN + M
Sbjct: 349 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 408
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E+ E+M S C P+ T+++M+ +C RG + N M G E + +L
Sbjct: 409 AMLEMLEEMSRS-GCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTL 467
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ + + + G TP LLNV+++
Sbjct: 468 ISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSR 508
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ T++ Y G D L +++ MK G PN+ TYN + +G+ R + +
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM+ +G +PN T+ ++L G+ + V MK G++LS YNTL++
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGR 473
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G AF+++++M SS P T+++++ + S +G S A+++ ++ML+ GF+PN
Sbjct: 474 CGSRTYAFKMYDEMISS-GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQ 532
Query: 286 VLTSLIQCYGKA 297
+ L+QCY K
Sbjct: 533 SYSLLLQCYAKG 544
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 110/209 (52%), Gaps = 2/209 (0%)
Query: 111 FSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ ++ +YG G ++ + + EEM+A GV+P+ T + ++ GR Q ++++
Sbjct: 218 YNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDL 277
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P TY +LL+ +G+A + L V +EM++ G Q YN L A G+
Sbjct: 278 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFF 337
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+EA + + M +S+ P+++T+++++T + G+V EA A+F+ M + G+ PN+
Sbjct: 338 EEAAKCLDTM-TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNL 396
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ GK R ++ L + G TP+
Sbjct: 397 IFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNE----KWRIDPNAFSTLIKLYGTAGNF 124
++G +P W N K + Y TR N + + ++TLI YG G+
Sbjct: 419 RSGCTPNRVTW-NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 477
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+Y+EM + G P + TYN LL+ + R ++I +M NG PN +Y+ L
Sbjct: 478 TYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLL 537
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
L+ Y + S+ +E+ + S + TL+ + + F+++K ++
Sbjct: 538 LQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVK-AQG 596
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+PD F+SM+ + + G S+A MF+ + ++G P+L SL+ Y K+ + +
Sbjct: 597 YKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAE 656
Query: 305 RALNRLPELGITPD 318
+ L +L + PD
Sbjct: 657 KILKQLKSSQVKPD 670
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
++ + N K R +++ + +A+ ++ D F++++ +Y G + +++ +
Sbjct: 570 RTLVIANFKCRRLEGVEKAFQEVKAQG--YKPDLVIFNSMLAMYAKNGLYSKATEMFDSI 627
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G+ P++ITYN+L+D ++ W+ + I K++ + + P+ +Y +++ + +
Sbjct: 628 KQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLI 687
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ + EM GM V Y+TL+ A + +EA E+ M N +P T+
Sbjct: 688 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM-IHHNLKPMELTYRR 746
Query: 255 MI-TICSCRGKVSEAEAMFNEM 275
++ + C + + EA +E+
Sbjct: 747 VVDSYCKAK-RYDEAREFLSEI 767
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 3/227 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI +Y ++ + V + ++ ++ + TYN ++ ++ +P Q +
Sbjct: 344 PNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKV 403
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y++M G+ P+ TY +L+ AYG+ E L ++R+M +G + +V Y++L++ C
Sbjct: 404 YEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEK 463
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A E+F M ENC+P+ TF+S+I CS G +A +F +M G +P+
Sbjct: 464 AGRWEMALELFSKMH-KENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGCKPDSI 522
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI Y + + ++A ++ G PD L+ V+ Q+
Sbjct: 523 TYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQS 569
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 201/432 (46%), Gaps = 24/432 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I G+ L + EM++ G+ N+ TY+ L++ +A + +Y
Sbjct: 275 DLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVY 334
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K+M + G SPN TY L+ Y + E+ + V ++++ +Q V YNT+++ C
Sbjct: 335 KQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKS 394
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +++E M ++ +P + T++++I+ +G+V +A +F +M+ G E N+
Sbjct: 395 GQPEQALKVYEKMLAA-GVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVIT 453
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
+SLI KA R + + +++ + P+ L+ + E+ +L E ++
Sbjct: 454 YSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQ 513
Query: 346 KSNSKLGYVVKL-LLEEQDIEGDFKK--EATELFNSISKDVKKAYCNCLIDLCVNLNLLE 402
K + L+ + G +++ +A E + A N L+++ +L
Sbjct: 514 TQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNSLMEVLWQSGVLL 573
Query: 403 NACKLLELGLT------LEVYTDI-QSRSPTQWSLHLKSLSLGAALTALHIWINDL-SKA 454
K L+L +YT+ Q + Q+S + + GAA+ + W+++L +K
Sbjct: 574 AQSKALQLWTLANRSGHFRIYTNSKQDSNVLQYS--TVAFTSGAAVVTVVRWVSELKNKL 631
Query: 455 LESGEEFPPLLGINTGH-GKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWF---LTTE 510
L+ G F + T H K S++ A +FES L + SP + F +T E
Sbjct: 632 LKDGPGFFRDKVVFTLHKSKQNRSEQPSARIFES--VSLLLAGNASPFTMHLFDQTITLE 689
Query: 511 AAAKS---WLES 519
AAA WL S
Sbjct: 690 AAAAPLTVWLRS 701
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 203/446 (45%), Gaps = 53/446 (11%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++TL+ +Y G F+ ++V EM+ G++ +++TYN LL G+ + V+ +
Sbjct: 286 LDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKV 345
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
++EM +SPN TY++L+ Y + + + V+RE K+ G++ V LY+ L+ A+C
Sbjct: 346 FEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCK 405
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI----------TICSCRGKVSEAEAMFNE 274
+ G + A + ++M + E +P+ T++S+I ++ G+ SE + +
Sbjct: 406 N-GLVESAVSLLDEM-TKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQ--IDS 461
Query: 275 MLEAGFEPNLFVLTS------LIQCYGK-------------AQRTDDVVRALNRLPELGI 315
+ + E L + +I+ +G+ Q ++ +++ EL I
Sbjct: 462 LSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGVFHKMHELEI 521
Query: 316 TPDDRFCGCLLNVMTQTPK-EELGKLVECVEK-SNSKLGYVVKLLLEEQDIEGDFKKEAT 373
P+ +LN ++ EE L+E + N G LL+ ++ + ++A
Sbjct: 522 KPNVVTFSAILNACSRCNSFEEASMLLEELRLFDNQVYGVAHGLLMGYRE---NVWEQAQ 578
Query: 374 ELFNSI---SKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSL 430
LF+ + A+ N L D+ + A ++ G +V+ ++ S S L
Sbjct: 579 SLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQVWENVWSES----CL 634
Query: 431 HLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLK 490
L +S GAA +H W+ ++ + G E P LL G D L E+ L
Sbjct: 635 DLHLMSSGAARAMVHAWLLNVRAIVFEGHEVPKLLSKVVG-------DSTLRRAVEALLM 687
Query: 491 ELNAPFHDSPDKVGWFLTTEAAAKSW 516
+ APF + +G ++T + SW
Sbjct: 688 GMGAPFRSAKCNLGRLISTGSVVASW 713
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 148/306 (48%), Gaps = 8/306 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTIYKE 168
AFS +I YG +G + + ++ MK G+KPN++TYN ++D G+ + +V I+ E
Sbjct: 114 AFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDE 173
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M NG+ P+ T+ SLL + E S+ EM +G+ + YNTLL G
Sbjct: 174 MLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQ 233
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D AFEI +M ++N P+ T+S+MI + G++ +A +FNEM G +
Sbjct: 234 LDMAFEIMSEM-PAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYN 292
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKS 347
+L+ Y K R ++ + + GI D LL + K + + K+ E ++
Sbjct: 293 TLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKAR 352
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA---YCNCLID-LCVNLNLLEN 403
+ + L + +G +EA ++F K KA + LID LC N L+E+
Sbjct: 353 HVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKN-GLVES 411
Query: 404 ACKLLE 409
A LL+
Sbjct: 412 AVSLLD 417
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 3/212 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN +ST+I Y AG D N++ EMK +G+ + ++YN LL + R +
Sbjct: 249 ILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAM 308
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM ++G+ + TY +LL YG+ + V+ EMK + + ++ Y+TL+ +
Sbjct: 309 DVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVY 368
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G EA ++F + K + + D +S++I G V A ++ +EM + G PN
Sbjct: 369 SKGGLYREAMDVFREFKKA-GLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 427
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ S+I +G+ T+ VV + EL I
Sbjct: 428 VVTYNSIIDAFGRPATTESVVDDAGQTSELQI 459
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 3/215 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
ID + F+ TL+ G D + EM A + PN++TY+ ++D +A R +
Sbjct: 214 IDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDAR 273
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM G+S + +Y +LL Y + E+ + V REM+ G++ V YN LL
Sbjct: 274 NLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGY 333
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D ++FE+MK+ + P+ T+S++I + S G EA +F E +AG + +
Sbjct: 334 GKQYKYDVVRKVFEEMKA-RHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKAD 392
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + ++LI K + V L+ + + GI P+
Sbjct: 393 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPN 427
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 2/237 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+D RN + D F++L+ + G ++ ++ EM G+ ++ TYN LLD +
Sbjct: 171 FDEMLRN-GMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVC 229
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+ + I EM + PN TY++++ Y +A +D +++ EMK G+ L
Sbjct: 230 KGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRV 289
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
YNTLL++ A +G +EA ++ +M++S + D T+++++ + K +F E
Sbjct: 290 SYNTLLSIYAKLGRFEEAMDVCREMENS-GIRKDVVTYNALLGGYGKQYKYDVVRKVFEE 348
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
M PNL ++LI Y K + + + G+ D L++ + +
Sbjct: 349 MKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCK 405
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVK 163
R+D A++T++ AG ++ L ++ E++ GV P ++TYN +LD GR R W ++
Sbjct: 86 RLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIV 145
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM G+ P+ T ++++ A GR + ++ + ++K +G V YN LL +
Sbjct: 146 ALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVF 205
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + ++M+ S CQPD+ T++ + + G EA + M G PN
Sbjct: 206 GKAGNYTEALRVLKEMEDS-GCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPN 264
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F +++ Y R D+ + +R+ + G P+
Sbjct: 265 TFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPN 299
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 3/212 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ F ST+I G G D + +E++KA G P ++TYN LL G+A +
Sbjct: 156 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEAL 215
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ KEM D+G P+ TY L Y RA + E+ M KG+ + YNT++
Sbjct: 216 RVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAY 275
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A+VG DEA +F+ MK + P+ T++ + + + + + M EM +G PN
Sbjct: 276 ANVGRVDEALALFDRMKKN-GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 334
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+++ GK D V R LN + G+
Sbjct: 335 RVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGV 366
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AGN+ L V +EM+ G +P+ +TYN L T RA + MT
Sbjct: 198 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 257
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL PN TY +++ AY ++ L+++ MK+ G +V YN + M
Sbjct: 258 SKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFT 317
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E+ E+M S C P+ T+++M+ +C RG + N M G E + +L
Sbjct: 318 AMLEMLEEMSRS-GCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTL 376
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ + + + G TP LLNV+++
Sbjct: 377 ISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSR 417
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ T++ Y G D L +++ MK G PN+ TYN + +G+ R + +
Sbjct: 263 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 322
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM+ +G +PN T+ ++L G+ + V MK G++LS YNTL++
Sbjct: 323 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGR 382
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G AF+++++M SS P T+++++ + S +G S A+++ ++ML+ GF+PN
Sbjct: 383 CGSRTYAFKMYDEMISS-GFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQ 441
Query: 286 VLTSLIQCYGKA 297
+ L+QCY K
Sbjct: 442 SYSLLLQCYAKG 453
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 110/209 (52%), Gaps = 2/209 (0%)
Query: 111 FSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ ++ +YG G ++ + + EEM+A GV+P+ T + ++ GR Q ++++
Sbjct: 127 YNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDL 186
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P TY +LL+ +G+A + L V +EM++ G Q YN L A G+
Sbjct: 187 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFF 246
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+EA + + M +S+ P+++T+++++T + G+V EA A+F+ M + G+ PN+
Sbjct: 247 EEAAKCLDTM-TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNL 305
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ GK R ++ L + G TP+
Sbjct: 306 IFGMLGKKSRFTAMLEMLEEMSRSGCTPN 334
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNE----KWRIDPNAFSTLIKLYGTAGNF 124
++G +P W N K + Y TR N + + ++TLI YG G+
Sbjct: 328 RSGCTPNRVTW-NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSR 386
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+Y+EM + G P + TYN LL+ + R ++I +M NG PN +Y+ L
Sbjct: 387 TYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLL 446
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
L+ Y + S+ +E+ + S + TL+ + + F+++K ++
Sbjct: 447 LQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVK-AQG 505
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+PD F+SM+ + + G S+A MF+ + ++G P+L SL+ Y K+ + +
Sbjct: 506 YKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAE 565
Query: 305 RALNRLPELGITPD 318
+ L +L + PD
Sbjct: 566 KILKQLKSSQVKPD 579
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
++ + N K R +++ + +A+ ++ D F++++ +Y G + +++ +
Sbjct: 479 RTLVIANFKCRRLEGVEKAFQEVKAQG--YKPDLVIFNSMLAMYAKNGLYSKATEMFDSI 536
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G+ P++ITYN+L+D ++ W+ + I K++ + + P+ +Y +++ + +
Sbjct: 537 KQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLI 596
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ + EM GM V Y+TL+ A + +EA E+ M N +P T+
Sbjct: 597 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM-IHHNLKPMELTYRR 655
Query: 255 MI-TICSCRGKVSEAEAMFNEM 275
++ + C + + EA +E+
Sbjct: 656 VVDSYCKAK-RYDEAREFLSEI 676
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 144/277 (51%), Gaps = 4/277 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
DP F T+I++Y A D L+V + MK IG++PN + Y ++L+ RA +P ++
Sbjct: 233 DPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLF 292
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM ++ +TY ++L Y +A + + +M++ G + +V Y+TL+ M V
Sbjct: 293 EEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKV 352
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +F MK + C+ + +++M+ + G++++AE + E+ ++ P+
Sbjct: 353 GKLQEATRLFSTMK-QQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVT 411
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
T+LI Y + R ++ +R + G+ D ++NV + + +L +L+E +
Sbjct: 412 YTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMP 471
Query: 346 KSNSKLG-YVVKLLLEEQDIEGDFKKEATELFNSISK 381
KS + ++K ++E + +G + A EL I++
Sbjct: 472 KSGIQPDTRILKTVVEIYE-DGGMCENAAELLRKINE 507
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 146/311 (46%), Gaps = 15/311 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +IK G F + + +MK +G P+++ YN L+ G+ Q +
Sbjct: 58 DIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYF 117
Query: 167 KEMTDNGLSPNWNTYASLL---RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ D GL P+ TY ++L R G G +TL +EM+E G++ Y+ L+ M
Sbjct: 118 SQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETL---KEMREAGIKPDQVAYSILIDMF 174
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++A F +++ S PDS ++++I + G V +A +F E + +
Sbjct: 175 GKAGRHEDAAATFRELQMS-GYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDD 233
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG--KLV 341
+ ++IQ Y KA+ D + L + E+G+ P++ G +LN + + +G KL
Sbjct: 234 PVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRA-NQPMGAIKLF 292
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKK----AYCNCLIDLCVN 397
E +++SN + G + + + F A EL + + + AY + LID+
Sbjct: 293 EEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAY-STLIDMYGK 351
Query: 398 LNLLENACKLL 408
+ L+ A +L
Sbjct: 352 VGKLQEATRLF 362
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 36/255 (14%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y ++ ++E D + ++ GN D +EM+ G+KP+ + Y+ L+D G
Sbjct: 116 YFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFG 175
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA--------------------------- 187
+A R ++E+ +G P+ Y +L+ A
Sbjct: 176 KAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPV 235
Query: 188 --------YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
Y +AR + L V + MKE G+Q + Y ++L A ++FE+M
Sbjct: 236 IFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEM 295
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ S NC+ T+ +M+ + S G S AE + +M + GF N+ ++LI YGK +
Sbjct: 296 QES-NCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGK 354
Query: 300 TDDVVRALNRLPELG 314
+ R + + + G
Sbjct: 355 LQEATRLFSTMKQQG 369
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + + T++ +Y AG + +M+ +G + N++ Y+ L+D G+ + +
Sbjct: 301 RFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATR 360
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ M G N Y ++L YG+A D + E+K+ + Y TL+
Sbjct: 361 LFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYN 420
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G +E +FE + ++ + D + MI + + S+ + M ++G +P+
Sbjct: 421 RLGRFEECIRVFEQHR-ADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDT 479
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+L ++++ Y ++ L ++ ELG
Sbjct: 480 RILKTVVEIYEDGGMCENAAELLRKINELG 509
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 56/109 (51%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ K D ++TLI Y G F+ C+ V+E+ +A G+K + I +++ G+A++
Sbjct: 401 KDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQY 460
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
++ + + M +G+ P+ +++ Y E+ + R++ E G
Sbjct: 461 SKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINELG 509
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A EI D +NC PD ++ +I G+ A+ F++M G P++ + LI
Sbjct: 42 ALEILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILI 101
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDD-RFCGCL 325
YGK ++ ++L + G+ PD +C L
Sbjct: 102 LEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVL 136
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +++LI+ + G + +Y+EM G P+++ NN +D + +A + + +
Sbjct: 514 PNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRAL 573
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E+ GL+P+ +Y+ L+ + + +DT ++ EMKE+G+ L YN ++
Sbjct: 574 FEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCK 633
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A+++ E+MK ++ QP T+ S+I + ++ EA +F E + N+
Sbjct: 634 SGKVNKAYQLLEEMK-TKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVV 692
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
V +SLI +GK R D+ L L + G+TP+ CLL+ + + EE+ + + C +
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKA--EEIDEALVCFQ 750
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 2/209 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++T+I YG+ G F+ ++ E K G P++I YN +L +GR + + I + M
Sbjct: 344 AYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ +PN +Y L+ +A E L V MKE G+ ++ N ++
Sbjct: 404 KMDA-APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
DEA IF + + C PDS TF S+I GKV++A ++ +ML++G PN V TS
Sbjct: 463 DEACSIFLGL-DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTS 521
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI+ + K R +D + + G +PD
Sbjct: 522 LIRNFFKCGRKEDGHKIYKEMMHRGCSPD 550
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 3/220 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + +D A++ +I + +G + + EEMK G++P ++TY +++D + + R
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++E + N Y+SL+ +G+ ++ + E+ +KG+ + +N L
Sbjct: 673 DEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCL 732
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEA 278
L DEA F++MK+ + C P+ T+S M+ +C R K ++A + EM +
Sbjct: 733 LDALVKAEEIDEALVCFQNMKNLK-CPPNEVTYSIMVNGLCKVR-KFNKAFVFWQEMQKQ 790
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +PN T++I + + R G PD
Sbjct: 791 GLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPD 830
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 3/224 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ + D ++ I +G G D + E+K+ G+ P+ +T+ +++ + +A+R
Sbjct: 264 KSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERV 323
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++E+ N P Y +++ YG + S+ K KG SV YN +
Sbjct: 324 DEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCI 383
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L G +EA I E MK + P+ +++ +I + G++ A + + M EAG
Sbjct: 384 LTCLGRKGKVEEALRILEAMKM--DAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAG 441
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFC 322
PN+ + +I KAQR D+ L TPD FC
Sbjct: 442 LFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFC 485
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 148/363 (40%), Gaps = 52/363 (14%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R K P A++ L+ L N + + EEM G P+ T ++ + ++++
Sbjct: 124 RKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKL 183
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + + M P ++ Y +L+ A A + L++ R+M+E G +++V L+ TL
Sbjct: 184 REAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTL 243
Query: 220 LAMCADVGYTDEAFEIFEDMKS----------------------------------SENC 245
+ + A G D A + ++MKS S+
Sbjct: 244 ICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGL 303
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD TF+SMI + +V EA +F E+ P ++ ++I YG + ++
Sbjct: 304 VPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYS 363
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNS----KLGYVVKLLLE 360
L R G P C+L + + K EE +++E ++ + ++ +L +
Sbjct: 364 LLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCK 423
Query: 361 EQDIEGDFK-----KEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLE 415
++E K KEA N I+ N +ID L+ AC + LGL +
Sbjct: 424 AGELEAALKVQDSMKEAGLFPNIIT-------VNIMIDRLCKAQRLDEACSIF-LGLDHK 475
Query: 416 VYT 418
V T
Sbjct: 476 VCT 478
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+++ ++ +S+LI +G G D + EE+ G+ PN T+N LLD + +A+
Sbjct: 682 AKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEE 741
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M + PN TY+ ++ + R ++EM+++G++ + Y T
Sbjct: 742 IDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTT 801
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+++ A VG EA ++FE KSS PDS +++MI S K +A +F E
Sbjct: 802 MISGLARVGNVLEAKDLFERFKSSGGI-PDSACYNAMIEGLSNANKAMDAYILFEE 856
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 40/255 (15%)
Query: 102 EKWRID--PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN---------- 147
E ++D PN +++ LI + AG + L V + MK G+ PN+IT N
Sbjct: 401 EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQ 460
Query: 148 -------------------------NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
+L+D +GR + +Y++M D+G +PN Y
Sbjct: 461 RLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYT 520
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
SL+R + + ED +Y+EM +G + L N + G ++ +FE++K +
Sbjct: 521 SLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIK-A 579
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ PD ++S +I G + +F EM E G + +I + K+ + +
Sbjct: 580 QGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNK 639
Query: 303 VVRALNRLPELGITP 317
+ L + G+ P
Sbjct: 640 AYQLLEEMKTKGLQP 654
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Query: 69 KTGSSPKSYIW--VNPKSPRASKLKEKSYDTR-ARNEKWRIDPNAFSTLIKLYGTAGNFD 125
+ G +P +Y W + +A ++ E + +N K + +S ++ F+
Sbjct: 719 QKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFN 778
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
++EM+ G+KPN ITY ++ + R + K +++ +G P+ Y +++
Sbjct: 779 KAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQL 211
A D ++ E + KG ++
Sbjct: 839 EGLSNANKAMDAYILFEETRLKGCRI 864
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AG + LN+ +EM+ + +TYN L+ RA + T+ MT
Sbjct: 341 YNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMT 400
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN TY +++ AYGRA L ++ +MK+ G +V YN++LA+ ++
Sbjct: 401 RKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSE 460
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E +I DM+ + C P+ T+++++ +C +GK +F EM GFEP +L
Sbjct: 461 EMIKILSDMRIN-GCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTL 519
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ D + + + + G TP LLN + +
Sbjct: 520 ISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALAR 560
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
+K+ +D A +T++ Y G + + ++E MK G+ P+++TYN +LD G+ R W
Sbjct: 226 DKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWD 285
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + EM + GL + T ++++ A GR + + E+K G + YN LL
Sbjct: 286 KILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALL 345
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA I ++M+ + NC DS T++ ++ G E + + M G
Sbjct: 346 QVFGKAGIYSEALNILKEMEDN-NCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGV 404
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN T++I YG+A + ++ N++ + G P+
Sbjct: 405 MPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPN 442
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ L+ Y AG ++ V + M GV PN +TY +++ GRA + + +
Sbjct: 371 LDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQL 430
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M +G PN TY S+L G+ E+ + + +M+ G + +NTLLAMC D
Sbjct: 431 FNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGD 490
Query: 226 VGYTDEAFEIFEDMKSSENC--QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G +F +MK NC +P TF+++I+ G +A M++EM++AGF P
Sbjct: 491 KGKHKFVNHVFREMK---NCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTP 546
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 7/215 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TL+ + G G +V+ EMK G +P T+N L+ GR +
Sbjct: 476 PNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKM 535
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM G +P TY +LL A R + SV +M+ KG + + T ++ +L A
Sbjct: 536 YDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAK 595
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS--CRGKVSEAEAMFNEMLEAGFEPN 283
G I +D+ + P SW + + + CR V E F E+++ G++P+
Sbjct: 596 GGNVRGLERIGKDIYDGQ-IFP-SWVLLRTLILANFKCRA-VRGMERAFEELMKNGYKPD 652
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + S++ + K + + L+ + E G+ PD
Sbjct: 653 MVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPD 687
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+TLI YG G+ +Y+EM G P TYN LL+ + R +++ +
Sbjct: 514 DTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLD 573
Query: 169 MTDNGLSPNWNTYASLLRAY-------GRARYGEDTLS---------------------- 199
M + G PN +++ +L Y G R G+D
Sbjct: 574 MRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRA 633
Query: 200 ------VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ E+ + G + + ++N++L++ A + A ++ + ++ S QPD T++
Sbjct: 634 VRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRES-GLQPDLVTYN 692
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
S++ + + RG+ +AE + ++++G P+L ++I+ + + + +R ++ +
Sbjct: 693 SLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTR 752
Query: 314 GITP 317
GI P
Sbjct: 753 GICP 756
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
++ I N K RA + E++++ +N ++ D F++++ ++ ++ + + +
Sbjct: 622 RTLILANFKC-RAVRGMERAFEELMKN-GYKPDMVIFNSMLSIFAKNNMYERAQKMLDLI 679
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+ G++P+++TYN+L++ R W+ + I K + +G SP+ +Y ++++ + R
Sbjct: 680 RESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLM 739
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ + V EM +G+ + YNT ++ A G E E+ M +NC+P+ T+
Sbjct: 740 QEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYM-IQKNCKPNELTYKI 798
Query: 255 MI 256
++
Sbjct: 799 IV 800
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 6/209 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN+ ++ + +FS ++ Y GN G + +++ + P+ + L+ + +
Sbjct: 575 RNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAV 634
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ ++E+ NG P+ + S+L + + E + ++E G+Q + YN+L
Sbjct: 635 RGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSL 694
Query: 220 LAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ M A G +A EI + + KS E+ PD +++++I +G + EA + +EM
Sbjct: 695 MNMYARRGECWKAEEILKGLIKSGES--PDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTR 752
Query: 279 GFEPNLFVLTSLIQCY---GKAQRTDDVV 304
G P +F + + Y G D+V+
Sbjct: 753 GICPCIFTYNTFVSGYAGRGMFAEVDEVI 781
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++LI+ + G + +Y+EM G P+++ N+ +D + +A + + +
Sbjct: 515 PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRAL 574
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E+ GL P+ +Y+ L+ +A + +T ++ EMKE+G+ L V YNT++
Sbjct: 575 FEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCK 634
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A+++ E+MK ++ QP T+ S++ + ++ EA +F E G + N+
Sbjct: 635 SGKVDKAYQLLEEMK-TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVV 693
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +SLI +GK R D+ L L + G+TP+ CLL+ + + EE+ + C +
Sbjct: 694 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKA--EEIDEAQVCFQ 751
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 110/220 (50%), Gaps = 3/220 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + +D A++T+I + +G D + EEMK G++P ++TY +++D + + R
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRL 673
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++E G+ N Y+SL+ +G+ ++ + E+ +KG+ + +N L
Sbjct: 674 DEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCL 733
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEA 278
L DEA F++MK+ + C P++ T+S MI +C R K ++A + EM +
Sbjct: 734 LDALVKAEEIDEAQVCFQNMKNLK-CSPNAMTYSIMINGLCMIR-KFNKAFVFWQEMQKQ 791
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +PN T++I KA + +R G PD
Sbjct: 792 GLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPD 831
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 3/224 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ + D ++ I +G G D + EMKA G+ P+ +TY L+ + +A+R
Sbjct: 265 KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRL 324
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++E+ N P Y +++ YG A ++ S+ K KG SV YN +
Sbjct: 325 DEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCI 384
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L G +EA I ++M+ ++ P+ T++ +I + G++ A + + M EAG
Sbjct: 385 LTCLGRKGKVEEALRIHDEMR--QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAG 442
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FC 322
PN+ + +I KAQ+ D+ L +PD R FC
Sbjct: 443 LFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFC 486
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 10/227 (4%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ + + F+TL++++ G D L++ +EMK+ +++ YN +D G+ +
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM GL P+ TY +L+ +AR ++ + ++ E+ V YNT++
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G DEA+ + E K + C P ++ ++T +GKV EA + +EM + PN
Sbjct: 354 GSAGKFDEAYSLLERQK-RKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APN 411
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
L LI KA + ++ + + E G+ P+ DR C
Sbjct: 412 LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLC 458
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
V E M+ +P Y L+ + A RP + T++ +M + G N + + +L+R
Sbjct: 188 FGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRV 247
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R + LS+ EMK + LYN + VG D A++ F +MK ++ P
Sbjct: 248 FAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMK-AQGLVP 306
Query: 248 DSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
D T++++I +C R ++ EA +F E+ P ++ ++I YG A + D+
Sbjct: 307 DDVTYTTLIGVLCKAR-RLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSL 365
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
L R G P C+L + + K E
Sbjct: 366 LERQKRKGCIPSVIAYNCILTCLGRKGKVE 395
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 11/225 (4%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI + AG + L V + MK G+ PN++T N ++D + +A++ + +I
Sbjct: 410 PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSI 469
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ + SP+ T+ SL+ GR +D S+Y +M + +V +Y +L+
Sbjct: 470 FLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++ +I+++M C PD +S + G+V + A+F E+ G P++
Sbjct: 530 CGRKEDGHKIYKEM-VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVR 588
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
+ LI KA + + + + E G+ D D FC
Sbjct: 589 SYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFC 633
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
Query: 86 RASKLKEKSYDTRARNEKWRIDP--NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
++ KLKE ++ K++ P +A++TLI A D L ++ +M+ IG + N+
Sbjct: 180 KSHKLKE-AFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANV 238
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ L+ R R ++ EM N + + Y + +G+ + + E
Sbjct: 239 HLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHE 298
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
MK +G+ Y TL+ + DEA E+FE++ + + P + +++MI G
Sbjct: 299 MKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSV-PCVYAYNTMIMGYGSAG 357
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
K EA ++ G P++ ++ C G+ + ++ +R
Sbjct: 358 KFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALR 399
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+D N +S+LI +G G D + EE+ G+ PN T+N LLD + +A+ + +
Sbjct: 688 VDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQ 747
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M + SPN TY+ ++ R ++EM+++G++ + Y T++A
Sbjct: 748 VCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGL 807
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A G EA +F+ K+S PDS +++MI S K +A +F E G N
Sbjct: 808 AKAGNVMEARGLFDRFKASGGV-PDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVN 866
Query: 284 LFVLTSLIQCYGKA 297
L+ KA
Sbjct: 867 SKTCVVLLDALHKA 880
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+++Y R ++ P+ A++ ++ G G + L +++EM+ PN+ TYN L
Sbjct: 360 DEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNIL 418
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D + +A + M + GL PN T ++ +A+ ++ S++ + K
Sbjct: 419 IDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVC 478
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +L+ G D+A+ ++E M S+ P+ ++S+I G+ +
Sbjct: 479 SPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQI-PNVVVYTSLIQNFFKCGRKEDGH 537
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
++ EM+ G P+L +L S + C KA + + G+ PD R
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVR 588
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
YN L M R + ++ I +EM+ G + + L+ ++ ++ ++ V M
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++ + + + Y TL+ + D +F M+ + + F++++ + + G+
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEI-GYEANVHLFTTLVRVFAREGR 253
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ A ++ +EM F +L + I C+GK + D + + + G+ PDD
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313
Query: 325 LLNVMTQTPKEELGKLVECVEK 346
L+ V+ + + L + VE E+
Sbjct: 314 LIGVLCKARR--LDEAVELFEE 333
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 69 KTGSSPKSYIW--VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYG--TAGNF 124
+ G +P SY W + +A ++ E + + PNA + I + G F
Sbjct: 720 QKGLTPNSYTWNCLLDALVKAEEIDEAQV-CFQNMKNLKCSPNAMTYSIMINGLCMIRKF 778
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+ ++EM+ G+KPN ITY ++ + +A + + ++ +G P+ Y ++
Sbjct: 779 NKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAM 838
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ A D V+ E + KG +++
Sbjct: 839 IEGLSSANKAMDAYIVFEETRLKGCRVN 866
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 163/328 (49%), Gaps = 19/328 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI YG G+ + +++ EMK +G P++ITYN L++ + ++ + +
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 323
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +NGL PN TY++L+ A+ + + + + +M+ G+ + Y +L+
Sbjct: 324 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKA 383
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA+++ DM + + + T+++++ G++ EAE +F ML+ G PN V
Sbjct: 384 GNLTEAWKLLNDMLQA-GVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQV 442
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
T+L+ Y KA+R +D ++ L ++ E I PD G ++ K E KL+ +E+
Sbjct: 443 YTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI--LEE 500
Query: 347 SNSKLGYVVKLLLEEQDIEGDFK----KEATELFNSISKDVKKA----YCNCLIDLCVNL 398
S+ G ++ I+ FK +A F + +A YC LID
Sbjct: 501 MKSR-GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC-VLIDGLCEA 558
Query: 399 NLLENA----CKLLELGL--TLEVYTDI 420
++E A C++L LGL + VYT +
Sbjct: 559 GIVELAVDYFCRMLSLGLQPNVAVYTSL 586
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 153/343 (44%), Gaps = 20/343 (5%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L E++ + +R +R P A S L+ +GN + +M G+ P++ TYN
Sbjct: 175 LLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYN 234
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
++D + + + ++ +M + GLSP+ TY SL+ YG+ E+ S++ EMK+
Sbjct: 235 VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV 294
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G + YN L+ AFE F +MK++ +P+ T+S++I G +
Sbjct: 295 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN-GLKPNVVTYSTLIDAFCKEGMMQG 353
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
A + +M G PN F TSLI KA + + LN + + G+ LN
Sbjct: 354 AIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK---------LN 404
Query: 328 VMTQTPKEE----LGKLVECVEKSNSKL--GYVVKLLLEEQDIEGDFKKEATELFNSISK 381
++T T + G+++E E S L G + + G K E E I K
Sbjct: 405 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 464
Query: 382 DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRS 424
+ + CN DL + +++ C +L T + +++SR
Sbjct: 465 QMTE--CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 6/219 (2%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ EEMK+ G+ N + ++D +A + ++EM D G+ TY L+
Sbjct: 497 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 556
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
A E + + M G+Q +V +Y +L+ + A ++F++M+ PD
Sbjct: 557 EAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQ-CRGMTPDI 615
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
F+++I G + EA + + M E E +L V TSL+ + + + N
Sbjct: 616 TAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 675
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
+ E GI P++ C CLL + G+L E +E N
Sbjct: 676 MIEKGILPEEVLCICLLREYYKR-----GQLDEAIELKN 709
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P +T+I Y AG LN ++EM+ +GV+ ++TY L+D + A +
Sbjct: 509 NPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYF 568
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M GL PN Y SL+ E ++ EM+ +GM +T + L+
Sbjct: 569 CRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 628
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA + M + + D ++S+++ S G++ +A FNEM+E G P +
Sbjct: 629 GNLQEALVLISRM-TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVL 687
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELG 314
L++ Y K + D+ + N + +
Sbjct: 688 CICLLREYYKRGQLDEAIELKNEMERMA 715
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 110/214 (51%), Gaps = 2/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVK 163
R+D A++T++ G ++ L +++E++ GV P +TYN +LD GR R W +V
Sbjct: 180 RLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVV 239
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +M G+ P+ T ++++ A GR ++ ++ + ++K +G V YN LL +
Sbjct: 240 ALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVF 299
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + +M+ + C+PD+ T++ + + G EA + M+ G PN
Sbjct: 300 GKAGNYTEALRVLREMEDA-GCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPN 358
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
F +++ YG A + D+ + +R+ + G P
Sbjct: 359 TFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIP 392
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ F ST+I G G D + +E++KA G P ++TYN LL G+A +
Sbjct: 250 VEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEAL 309
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM D G P+ TY L +Y RA + ++ M KG+ + YNT++
Sbjct: 310 RVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAY 369
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G DEA +F+ MK + P + T++ ++ + + + + M EM +G PN
Sbjct: 370 GNAGKVDEALALFDRMKKN-GFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPN 428
Query: 284 LFVLTSLIQCYGKAQRTDDVVRAL 307
+L+ GK V R L
Sbjct: 429 RVTWNTLLAVCGKRGMESYVTRVL 452
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 98/192 (51%), Gaps = 3/192 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ T++ YG AG D L +++ MK G P TYN +L +G+ R + +
Sbjct: 357 PNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEM 416
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM+ +G +PN T+ +LL G+ V MK ++L YNTL+
Sbjct: 417 LGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGR 476
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G AF+++++M ++ P T+++++ + S +G + A ++ ++M GF+PN
Sbjct: 477 CGSRANAFKMYDEM-TAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDM 535
Query: 286 VLTSLIQCYGKA 297
+ L+QC+ K
Sbjct: 536 SYSLLLQCHAKG 547
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 6/246 (2%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRA----RNEKWRIDPNAFSTLIKLYGTAGNF 124
++G +P W N K +SY TR ++ K + + ++TLI YG G+
Sbjct: 422 RSGCTPNRVTW-NTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSR 480
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+Y+EM A G P + TYN LL+ + R ++I +M G PN +Y+ L
Sbjct: 481 ANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLL 540
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
L+ + + ++ +E+ + + S + TL+ + F+++K+ +
Sbjct: 541 LQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGH 600
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+PD +SM++I + G S+A MF + + G P+L SL+ Y K+ +
Sbjct: 601 -KPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAE 659
Query: 305 RALNRL 310
+ LNRL
Sbjct: 660 KILNRL 665
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 5/215 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L Y AG + + M G+ PN TYN ++ G A + + ++
Sbjct: 323 DAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALF 382
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG P NTY +L G+ L + EM G + +NTLLA+C
Sbjct: 383 DRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKR 442
Query: 227 GYTDEAFEIFEDMKSS--ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + E MKS E C+ T++++I G + A M++EM AGF P L
Sbjct: 443 GMESYVTRVLEGMKSCKVELCRD---TYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCL 499
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+L+ + ++++ G P+D
Sbjct: 500 TTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPND 534
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
++ + N K R ++ + +AR K D ++++ +Y G + + ++E +
Sbjct: 573 RTLVIANFKCRRLEGIERAFQEVKARGHK--PDLVILNSMLSIYAKNGLYSKAMEMFESI 630
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+ +G+ P++ITYN+L+D ++ PW+ + I +
Sbjct: 631 EQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLR------------------------ 666
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ ++ +++ ++ V YNT++ G EA + +M ++ P T+ +
Sbjct: 667 --SSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEM-IADGVAPCVITYHT 723
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
++ + R +EA + M++ +P ++ Y +A+R +D L + E
Sbjct: 724 LVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLAVVAEAD 783
Query: 315 ITPDDRFCGCL 325
D++ G L
Sbjct: 784 TNSDEKLLGAL 794
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+E + D ++TL+ G D V+ M GV P++ TY L+DT G+ R
Sbjct: 241 RHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRL 300
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+V + KEM G P ++Y LL AY R ED V+R M+E G + Y+ L
Sbjct: 301 DKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSIL 360
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L + G DE E+F +MK S N +PD+ T++++I + G E +F++M E
Sbjct: 361 LGLYGKHGRYDEVRELFLEMKVS-NTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEEN 419
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EPN+ LI GK DD + L + E G+ P +
Sbjct: 420 VEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSK 460
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 164/377 (43%), Gaps = 18/377 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI ++G G F + ++ +M V+PNM TY L+ G+ K I
Sbjct: 388 DAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKIL 447
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M++ G+ P+ Y ++ AYG+A E+ L M E G + ++ YNTL+ M A
Sbjct: 448 LHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARG 507
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E I M + +F+ +I G+ EA + EM ++ P+
Sbjct: 508 GLYKETEAILLKM-GDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERT 566
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC-LLNVMTQTPK--EELGKLVEC 343
L +++ Y A D+ V + GI P + C C +L V ++ + E L E
Sbjct: 567 LEAVLSVYCIAGLVDESVEQFQEIKASGILP-NVMCYCMMLAVYAKSDRWNEAYELLDEM 625
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEAT--------ELFNSISKDVKKAYCNCLIDLC 395
+ S + V+ Q I+GDF ++ + NS + + N L++
Sbjct: 626 LTNRASNIHQVIG-----QMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEAL 680
Query: 396 VNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKAL 455
L E A ++L + ++ +S WS+ + + G+A TA+ +W+N++ +
Sbjct: 681 WWLGQKERAVRVLGEATKRGHFPELFRKSKLVWSVDIHRMWEGSAYTAISVWLNNMYEIF 740
Query: 456 ESGEEFPPLLGINTGHG 472
+ ++ P L + G
Sbjct: 741 MNRQDIPQLASVIVVRG 757
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K ++ N F+ + K + G++ L +++ M + I KPN Y ++ +GR +
Sbjct: 102 KNKLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEK 161
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
I++EM +G+S + +Y +L+ +YGR E +L + MK++ + S+ YNT++
Sbjct: 162 CSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVIN 221
Query: 222 MCADVGYTDEA-FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
CA G E +F +M+ E QPD T+++++ CS RG EAE +F M E G
Sbjct: 222 SCARGGLDWEGLLGLFAEMR-HEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGV 280
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ T L+ +GK R D V L + G P+
Sbjct: 281 VPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPE 318
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTIYKE 168
+++ LI YG G ++ L + E MK V P+++TYN ++++ R W+ + ++ E
Sbjct: 180 SYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAE 239
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ P+ TY +LL A G++ V+R M E G+ +T Y L+ +
Sbjct: 240 MRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNR 299
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D+ E+ ++M S+ N P+ +++ ++ + G + +A +F M EAG PN +
Sbjct: 300 LDKVSELLKEMASTGNV-PEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYS 358
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
L+ YGK R D+V + PD L++V +
Sbjct: 359 ILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGE 401
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 149/320 (46%), Gaps = 8/320 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ D + TLI ++ G + +++Y M+ +G+ P+ TY+ +++ +G+
Sbjct: 432 YEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAY 491
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM +NG +PN TY ++ +AR E+ + +Y++M+ G + Y+ ++ +
Sbjct: 492 KLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVL 551
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G+ DEA +F +M+ + PD + ++ + G V +A ++ ML+ G +PN
Sbjct: 552 GHCGHLDEAEAVFIEMR--HDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPN 609
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+ SL+ + K R D L + G+ P + LL+ T+ + ++G +
Sbjct: 610 VPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSCCTEA-QAQMGLCCQL 668
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF----NSISKDVKKAYCNCLIDLCVNLN 399
+ + ++ L L + + G ++ T F +S ++ K+ + +ID
Sbjct: 669 MAITGHP-AHMFLLYLPDAEPGGQNVRDHTRYFLDMMHSEDRESKRGLMDAVIDFLHKSG 727
Query: 400 LLENACKLLELGLTLEVYTD 419
L E A + E+ VY D
Sbjct: 728 LKEEAGFIWEVAAQRNVYPD 747
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G + ++Y +++ G+AR + EM + +V YN ++ Y EA
Sbjct: 361 GFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREA 420
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
++FE+M+ + +PD T+ ++I I + G + A ++ M E G P+ F ++++
Sbjct: 421 VKVFEEMQKA-GYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVN 479
Query: 293 CYGKAQRTDDVVRALNRLPELGITPD 318
C GK + + E G TP+
Sbjct: 480 CLGKGGHLAAAYKLFCEMVENGCTPN 505
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++ G + Y T++ + ++ ++M S +C+P T++ +I
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSV-HCKPTVVTYNRIIHAYGRANY 416
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ EA +F EM +AG+EP+ +LI + K + + R+ E+G++PD
Sbjct: 417 LREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSA 476
Query: 325 LLNVM 329
++N +
Sbjct: 477 MVNCL 481
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 131/269 (48%), Gaps = 7/269 (2%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ F +++ Y A D + + M+ GV PN+ +N+LL + ++K + + I
Sbjct: 133 VNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEI 192
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M ++ SP+ TY+ LL +GRA VY EM + G + + Y ++
Sbjct: 193 FDKM-NSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCK 251
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA + +DM +S CQP ++ +S ++ ++ +A A F +M + G P++
Sbjct: 252 TGRVEEAVRVVQDM-TSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIV 310
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LGKL 340
V +L+ + KA++ ++ R LN + GIT + R +LN + +++ ++
Sbjct: 311 VYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRM 370
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFK 369
++C + ++K+ E +E K
Sbjct: 371 IKCCQPDCDTYTMMIKMFCENDKVEMALK 399
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N ++ D +S L++ +G A N VY EM G +P+++TY ++D++ + R
Sbjct: 197 NSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVE 256
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + ++MT G P Y+ L+ YG ED ++ + +M++ G+ + +YN L+
Sbjct: 257 EAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALV 316
Query: 221 -AMC----------------------------------ADVGYTDEAFEIFEDMKSSENC 245
A C +G DEA+++F M C
Sbjct: 317 SAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKC--C 374
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
QPD T++ MI + KV A ++ M F P++ + LI +
Sbjct: 375 QPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACV 434
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
L + E GI P G L ++ + ++++ + VEK N
Sbjct: 435 LLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFL--VEKMN 475
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 117/225 (52%), Gaps = 4/225 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D F +I +Y +G++ ++ +M G+ + +T+N+L+ G K +V
Sbjct: 245 FKPDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQSTVTFNSLMSFEGDYK---EVS 301
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+IY +M GL P+ +Y+ L++AYG+AR E+ +V+ EM + G++ + YN LL
Sbjct: 302 SIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAF 361
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A G +EA +F+ M+ +PD ++++M+ + AE F + E G PN
Sbjct: 362 AISGLVEEAQTVFKTMRR-HRVEPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPN 420
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+ V +L++ Y K + V+R R+ G+ P+ +++V
Sbjct: 421 VVVYGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQTIFTTIMDV 465
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 159/366 (43%), Gaps = 38/366 (10%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F L+ YG G+F V + M G +P +I+ L++ GRAK+ + +
Sbjct: 137 WDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALMEAYGRAKQYRKAE 196
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM---KEKGMQLSVTLYNTLL 220
++ M +G P+ TY +L++ ++ +++ ++ K + +++ ++
Sbjct: 197 AVFHRMQTSGPEPSPITYQIILKSLVEGDKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMI 256
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDS-WTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
M G +A ++F M SE P S TF+S++ S G E +++++M AG
Sbjct: 257 YMYKKSGDYAQARKLFAQM--SERGIPQSTVTFNSLM---SFEGDYKEVSSIYDQMQRAG 311
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP-KEELG 338
+P++ + LI+ YGKA+R ++ + + GI P + LL+ + EE
Sbjct: 312 LKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQ 371
Query: 339 KLVECVEKSNSK---LGYVVKLL--LEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
+ + + + + Y LL + D++G A + F I +D +
Sbjct: 372 TVFKTMRRHRVEPDLCSYTTMLLAYVNASDMDG-----AEKFFRRIKED------GLRPN 420
Query: 394 LCVNLNLLENACKLLELGLTLEVY--TDIQSRSPTQ------WSLHLKSLSLGAALTALH 445
+ V L++ KL + + VY +Q P Q +H ++ G A+
Sbjct: 421 VVVYGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQTIFTTIMDVHGRNSDFGNAV---- 476
Query: 446 IWINDL 451
IW N++
Sbjct: 477 IWFNEM 482
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S LIK YG A + V+EEM G++P +YN LLD + + +T++
Sbjct: 315 DVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQTVF 374
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + + P+ +Y ++L AY A + +R +KE G++ +V +Y TL+ + +
Sbjct: 375 KTMRRHRVEPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKL 434
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++ ++E M+ + +P+ F++++ + A FNEM G+ P+
Sbjct: 435 DNVEKVMRVYERMR-MQGVEPNQTIFTTIMDVHGRNSDFGNAVIWFNEMETRGYPPD 490
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+ R++P+ +++T++ Y A + DG + +K G++PN++ Y L+ +
Sbjct: 379 RHRVEPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVE 438
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+V +Y+ M G+ PN + +++ +GR + + + EM+ +G N LL
Sbjct: 439 KVMRVYERMRMQGVEPNQTIFTTIMDVHGRNSDFGNAVIWFNEMETRGYPPDKKAKNILL 498
Query: 221 AMCADVGYTDEAFEI 235
++ EA E+
Sbjct: 499 SLAKTPEEQQEANEL 513
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 184/434 (42%), Gaps = 50/434 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ L+ LYG G FDG ++ EM+ V P+ TYN L G +V ++ +M
Sbjct: 353 YRVLLDLYGRQGRFDGVRELFREMRT-AVPPDTATYNVLFSVFGDGGFFKEVVELFHDML 411
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ T +L A G+ ED V + ++GM + Y L+ +
Sbjct: 412 RTGIEPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMVPTAKAYTGLVEALGHAAMYE 471
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFVLTS 289
EA+ F +M + P T++S+ + + G EAE++F+ M AG + N +
Sbjct: 472 EAYVAF-NMMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMTNSAGIQKNKDSFDA 530
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKLVECV 344
LI+ Y + + DD V+A + + PD+R +LN + KE+ + ++
Sbjct: 531 LIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEE-IQSN 589
Query: 345 EKSNSKLGYVVKL--------------LLEEQD--------------IEGDFKKE----- 371
S + Y + L LLEE I+G++
Sbjct: 590 MAVPSIIAYCMMLSLYARNDRWADAYDLLEEMKTNRASSTHQVIASMIQGEYDDSSNWQM 649
Query: 372 ---ATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
A + N D + N L+D+ A ++L+ + ++ ++ + W
Sbjct: 650 VEYALDSSNLEGCDYSLRFFNALLDVLWWFGQKARAARVLDHAVNSGLFPELSRDTKLVW 709
Query: 429 SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS--DKGL--ASV 484
SL + +S+G AL A+ +W+N L L+ ++ P L + GK + S +GL A V
Sbjct: 710 SLDVHRMSVGGALVAVSVWLNKLYARLKGEKDLPQLASVVVLRGKMEKSTITRGLPIAKV 769
Query: 485 FESHLKE-LNAPFH 497
S L + L++ FH
Sbjct: 770 VYSFLNDTLSSSFH 783
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TL+ D + M GV P+ +Y +++D RA +V
Sbjct: 242 RPDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGVLPDTASYRHIVDAFARAGDLSRVAE 301
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM D G +P+ + Y L+ A+ R + ++V R+M+ G + Y LL +
Sbjct: 302 LFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYG 361
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D E+F +M+++ PD+ T++ + ++ G E +F++ML G EP++
Sbjct: 362 RQGRFDGVRELFREMRTA--VPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDM 419
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++ G+ +D L+ + + G+ P
Sbjct: 420 ETCEGVLVACGQGGLHEDAREVLDYITKEGMVP 452
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 97/259 (37%), Gaps = 44/259 (16%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW--------- 160
++++LI Y + + ++MKA GV P TYN +L RA P
Sbjct: 170 SYTSLIAAYARNALHEEARALLDQMKAAGVAPTAATYNTVLAACARATDPPVPFDMLLGL 229
Query: 161 ---------------------------------QVKTIYKEMTDNGLSPNWNTYASLLRA 187
Q + + + M + G+ P+ +Y ++ A
Sbjct: 230 FAEMRHDVSPAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGVLPDTASYRHIVDA 289
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ RA ++REM + G + Y L+ VG T EA + M+ ++ C P
Sbjct: 290 FARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQ-ADGCAP 348
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+ ++ + +G+ +F EM A P+ L +G +VV
Sbjct: 349 TAATYRVLLDLYGRQGRFDGVRELFREMRTA-VPPDTATYNVLFSVFGDGGFFKEVVELF 407
Query: 308 NRLPELGITPDDRFCGCLL 326
+ + GI PD C +L
Sbjct: 408 HDMLRTGIEPDMETCEGVL 426
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ L+K Y AG + EM+ GV P+ TY+ L+D A R + + KEM
Sbjct: 328 AYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEM 387
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
N + PN ++ +L +Y + + V +EMK G++ YN ++
Sbjct: 388 EANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCL 447
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE-AEAMFNEMLEAGFEPNLFVLT 288
D A + F+ M SE QPD+ T++++I C C+ ++ E AE +F EM+E GF P +
Sbjct: 448 DHAMDTFDKML-SEGIQPDTVTWNTLID-CHCKAELHERAEELFEEMMEKGFSPCVTTFN 505
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
+I +G+ +R DDV + + LG+ P+ L+++ ++ + +EC+E
Sbjct: 506 IMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGR--FSDAIECLEDMK 563
Query: 349 S 349
S
Sbjct: 564 S 564
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 112/219 (51%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N R D + ++ +I +G D ++ +++M + G++P+ +T+N L+D +A+
Sbjct: 423 KNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELH 482
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +++EM + G SP T+ ++ ++G +D ++ M+ G+ +V Y TL
Sbjct: 483 ERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTL 542
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G +A E EDMKS+ +P S ++++I + +G +A F M
Sbjct: 543 IDIYGKSGRFSDAIECLEDMKSA-GLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADS 601
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P+L L SLI +G+ +R + L + E + PD
Sbjct: 602 LKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPD 640
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K +D + +I + AG+ + + ++A G+ P T ++ +G + R +
Sbjct: 250 DKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIE 309
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ I++EM DNGL P Y LL+ Y +A +D + EM+ G+ Y+ L+
Sbjct: 310 AEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLID 369
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
++ G + A + ++M+++ N P+S+ FS ++ RG+ ++ + EM +G
Sbjct: 370 AYSNAGRWESARIVLKEMEAN-NIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVR 428
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+ +I +GK D + +++ GI PD
Sbjct: 429 PDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPD 465
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 3/236 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E I PN+ FS ++ Y G + V +EMK GV+P+ YN ++DT G+
Sbjct: 388 EANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCL 447
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +M G+ P+ T+ +L+ + +A E ++ EM EKG VT +N +
Sbjct: 448 DHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIM 507
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + D+ + +M+S P+ T++++I I G+ S+A +M AG
Sbjct: 508 INSFGEQERWDDVKTLMGNMRSL-GLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAG 566
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
+P+ + +LI Y + ++ V A + + P L+N + ++
Sbjct: 567 LKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRD 622
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ +I +G +D + M+++G+ PN++TY L+D G++ R ++M
Sbjct: 504 FNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMK 563
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL P+ Y +L+ AY + E ++ +R M+ ++ S+ N+L+ +
Sbjct: 564 SAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDA 623
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
EAF + + MK ++ +PD T+++++ K ++ +++ EM+ AG P+
Sbjct: 624 EAFSVLKYMKEND-LKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGCTPD 675
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 130/285 (45%), Gaps = 11/285 (3%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL--SVY 201
+TYN L++ R + + M +G ++ Y+ ++++ R+ + + +Y
Sbjct: 185 LTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLY 244
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
E++ ++L V L N ++ A G ++A E F M + P + T ++I+
Sbjct: 245 SEIQCDKLELDVQLSNDIIVGFAKAGDPNKAME-FLGMVQASGLSPRTATLIAVISALGD 303
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G++ EAEA+F EM + G +P L++ Y KA D ++ + G++PD+
Sbjct: 304 SGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECT 363
Query: 322 CGCLLNVMTQTPKEELGKLVECVEKSNSKL--GYVVKLLLEEQDIEGDFKKEATELFNSI 379
L++ + + E ++V ++N+ + YV +L G+++K L
Sbjct: 364 YSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMK 423
Query: 380 SKDVK--KAYCNCLIDLCVNLNLLENAC----KLLELGLTLEVYT 418
+ V+ + + N +ID + L++A K+L G+ + T
Sbjct: 424 NSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVT 468
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A ++LI +G +V + MK +KP+++TY L+ + R + +V ++Y+EM
Sbjct: 608 ALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEM 667
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
G +P+ A L A +Y + TL++
Sbjct: 668 ILAGCTPDRKARAMLRSAL---KYMKQTLNL 695
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + V+++MK++G P+ +TYN LLD G+++R + +
Sbjct: 103 DEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVL 162
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM NG SP+ TY SL+ AY R ++ + + +M E G+ L V Y TLL+
Sbjct: 163 REMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRA 222
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV--------------------- 265
G + A +F +M+++ C+P+ TF+++I + RGK
Sbjct: 223 GKDESAMRVFAEMRAA-GCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVT 281
Query: 266 --------------SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
SE +F EM AGF P +LI Y + D + R+
Sbjct: 282 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRML 341
Query: 312 ELGITPD 318
E GITPD
Sbjct: 342 EAGITPD 348
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 38/247 (15%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LIK++G G F + V+EE+K P+++T+N LL G+ +V +
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGV 301
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM G P +TY +L+ AY R + + +Y+ M E G+ ++ YN +LA A
Sbjct: 302 FKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALAR 361
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGKVS---- 266
G +++ +IF +MK C+P+ T+ S++ + C G +
Sbjct: 362 GGLWEQSEKIFAEMKDGR-CKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAV 420
Query: 267 ----------------EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
EAE F E+ GF P+L L +++ YG+ Q LN +
Sbjct: 421 LLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFM 480
Query: 311 PELGITP 317
E G TP
Sbjct: 481 NESGFTP 487
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 116/218 (53%), Gaps = 2/218 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
+ + +D A+++LI + G + + V+++M+ G KP +ITYN +L+ G+ PW
Sbjct: 27 DGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWN 86
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++K +++ M + G+ P+ TY +L+ R E+ +V+++MK G YN LL
Sbjct: 87 KIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALL 146
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ T EA E+ +M+ + C P T++S+I+ + G + EA + N+M+E G
Sbjct: 147 DVYGKSRRTKEAMEVLREMEVN-GCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGI 205
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++F T+L+ + +A + + +R + G P+
Sbjct: 206 NLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPN 243
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 2/222 (0%)
Query: 111 FSTLIKLYGTAGN-FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ ++ +YG G ++ ++E MK GV P+ TYN L+ R + ++K+M
Sbjct: 71 YNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDM 130
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P+ TY +LL YG++R ++ + V REM+ G S+ YN+L++ A G
Sbjct: 131 KSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLL 190
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA E+ M D +T++++++ GK A +F EM AG +PN+ +
Sbjct: 191 KEAMELKNQMVEG-GINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNA 249
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
LI+ +G + ++++ + PD LL V Q
Sbjct: 250 LIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQ 291
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+ + ++TLI Y G+FD +++Y+ M G+ P++ TYN +L + R Q + I+
Sbjct: 313 ERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIF 372
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D PN TY SLL AY + L++ E+ ++ L TL+ + +
Sbjct: 373 AEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKC 432
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA F ++K + PD T ++M++I R ++ + N M E+GF P+L
Sbjct: 433 DLLVEAEVAFLELK-RKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLAT 491
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ + +++ + L + GI PD
Sbjct: 492 YNSLMYMHSRSENFERSEEVLKEILAKGIKPD 523
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ E+K G P++ T N +L GR + + I M ++G +P+ TY SL+ + R
Sbjct: 442 FLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSR 501
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ E + V +E+ KG++ YNT++ G EA IF +M+ S PD
Sbjct: 502 SENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRES-GLVPDVI 560
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+++ + + +A + M++ G +PN S++ Y K DD + ++ L
Sbjct: 561 TYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSL 620
Query: 311 PEL 313
EL
Sbjct: 621 HEL 623
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 108/230 (46%), Gaps = 5/230 (2%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+S A + R PN + +L+ Y L + EE+ + ++P+ + L
Sbjct: 366 EQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTL 425
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ + + + + E+ G SP+ +T ++L YGR + T + M E G
Sbjct: 426 VLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGF 485
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEA 268
S+ YN+L+ M + + + E+ +++ + + +PD+ +++++I CR G++ EA
Sbjct: 486 TPSLATYNSLMYMHSRSENFERSEEVLKEILA-KGIKPDTISYNTVI-FAYCRNGRMKEA 543
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F+EM E+G P++ + + Y +D + + + + G P+
Sbjct: 544 SRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPN 593
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 2/226 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ +I + G G ++ ++ G ++ Y +L+ R + ++K+M +
Sbjct: 2 AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTL-SVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P TY +L YG+ + + ++ MK G+ YNTL+ C +
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F+DMKS PD T+++++ + + EA + EM G P++ SL
Sbjct: 122 EAAAVFKDMKSM-GFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSL 180
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
I Y + + + N++ E GI D LL+ + K+E
Sbjct: 181 ISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDE 226
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + + ++ +YG F + M G P++ TYN+L+ R++ + + +
Sbjct: 453 DLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVL 512
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KE+ G+ P+ +Y +++ AY R ++ ++ EM+E G+ V YNT +A A
Sbjct: 513 KEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAAD 572
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++A ++ M C+P+ T++S++
Sbjct: 573 SMFEDAIDVVRYM-IKHGCKPNQNTYNSVV 601
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++L+ ++ + NF+ V +E+ A G+KP+ I+YN ++ R R + I+ EM
Sbjct: 492 YNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMR 551
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++GL P+ TY + + +Y ED + V R M + G + + YN+++ + D
Sbjct: 552 ESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRD 611
Query: 231 EAF 233
+A
Sbjct: 612 DAI 614
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I Y G ++ EM+ G+ P++ITYN + + +
Sbjct: 523 DTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVV 582
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+ M +G PN NTY S++ Y + + +D + + E
Sbjct: 583 RYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHE 622
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 40/284 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW------ 160
D +A++ L+ + A F + V+ M A G++P ++TYN +L + PW
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVAL 236
Query: 161 ------------------------------QVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ ++ EM G P+ T+ SLL YG+
Sbjct: 237 VDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGK 296
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
AR ++ + V +EM+ G SV YN+L++ G EA E+ E+M+ + QPD
Sbjct: 297 ARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEME-VKGIQPDVI 355
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++++I+ GK+ A ++EML G +PNL +LI+ +G + +++ + L
Sbjct: 356 TYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDL 415
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
G PD LL V Q L V V K K GYV
Sbjct: 416 RSAGFVPDVVTWNTLLAVFGQN---GLDSEVSGVFKEMKKSGYV 456
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N+ +D ++TLI + V++EM+A G +P+ +T+N+LLD G+A+
Sbjct: 241 KNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMH 300
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + KEM G P+ TY SL+ +Y + ++ + EM+ KG+Q V Y TL
Sbjct: 301 DEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTL 360
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++ G D A +++M + C+P+ T++++I + RGK E A+F+++ AG
Sbjct: 361 ISGLDRAGKIDAAIGTYDEMLRN-GCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAG 419
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F P++ +L+ +G+ +V + + G P+
Sbjct: 420 FVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPE 458
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 86 RASKLKEK--SYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
RA K+ +YD RN PN ++ LIKL+G G F + V++++++ G P
Sbjct: 366 RAGKIDAAIGTYDEMLRNG---CKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVP 422
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++T+N LL G+ +V ++KEM +G P +TY SL+ +Y R + ++ +Y
Sbjct: 423 DVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIY 482
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+ M E G+ ++ YN +L+ A G ++A ++F +M++ + C+PD ++SS++ +
Sbjct: 483 KRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLD-CRPDELSYSSLLHAYAN 541
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
K+ + +A+ ++ E + ++ +L+ K + +A ELG R
Sbjct: 542 AKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFL---ELG----RRR 594
Query: 322 CGCLLNVM 329
C +NV+
Sbjct: 595 CSLDINVL 602
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + D F++L+ +YG A D + V +EM+ G P+++TYN+L+ + +
Sbjct: 276 RAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLL 335
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +EM G+ P+ TY +L+ RA + + Y EM G + ++ YN L
Sbjct: 336 KEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNAL 395
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G E +F+D++S+ PD T+++++ + G SE +F EM ++G
Sbjct: 396 IKLHGVRGKFPEMMAVFDDLRSA-GFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSG 454
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ P SLI Y + D + R+ E GI PD +L+ + +
Sbjct: 455 YVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALAR 506
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 5/199 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG-RAKRPWQV 162
I P+ ++TLI AG D + Y+EM G KPN+ TYN L+ G R K P ++
Sbjct: 350 IQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFP-EM 408
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ ++ G P+ T+ +LL +G+ + V++EMK+ G Y +L++
Sbjct: 409 MAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISS 468
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ G D++ EI++ M + PD T++++++ + G+ +AE +F EM P
Sbjct: 469 YSRCGLFDQSMEIYKRMIEA-GIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRP 527
Query: 283 NLFVLTSLIQCYGKAQRTD 301
+ +SL+ Y A++ D
Sbjct: 528 DELSYSSLLHAYANAKKLD 546
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 176 PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI 235
P+ + Y +L+ A+ RA D ++V+R M G+Q ++ YN +L + + + +
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235
Query: 236 FEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
D ++ D +T++++I+ C EA +F+EM AGFEP+ SL+ YG
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295
Query: 296 KAQRTDDVVRALNRLPELGITP 317
KA+ D+ + L + ELG P
Sbjct: 296 KARMHDEAIGVLKEM-ELGGCP 316
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 103/227 (45%), Gaps = 1/227 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N R D ++S+L+ Y A D + E++ A ++ + L+ +
Sbjct: 522 NLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLS 581
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + + E+ S + N +++ YG+ R + + MK + LS YN+L+
Sbjct: 582 ETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLM 641
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
M + +G ++ I ++KSS +PD +++++MI +G++ EA +F+EM +G
Sbjct: 642 HMYSRLGDCEKCENILTEIKSS-GARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGL 700
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
P++ ++ Y ++ + + + G P++R +L
Sbjct: 701 IPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQ 747
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 29 RDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRAS 88
R D LS+ S + L + ++ + +++ + HG K+ + VN K S
Sbjct: 526 RPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLV----KTLVLVNSKVNNLS 581
Query: 89 KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
+ EK++ R + +D N + ++ +YG + MK + + TYN+
Sbjct: 582 E-TEKAFLELGR-RRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNS 639
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L+ R + + I E+ +G P+ +Y +++ AYGR ++ ++ EMK G
Sbjct: 640 LMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSG 699
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ + YN + +EA ++ M + C+P+ T++S++ GK+++A
Sbjct: 700 LIPDIVTYNIFVKSYVANSMFEEAIDLVRYM-VTRGCKPNERTYNSILQEYCRHGKIADA 758
Query: 269 EAMFNEM 275
++ + +
Sbjct: 759 KSFLSNL 765
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 23/307 (7%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI AG D + + +EM GV N++TY L+D + + ++ + + + + M
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ N Y +L+ + + E L + EMK KG++L ++LY L+ +V D
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + M S +P+ +++M+ C GKV EA AM ++L++GF+PN+ +L
Sbjct: 451 EAKSLLTKMDES-GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCAL 509
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC--GCLLNVMTQTPKEELGKL 340
I KA D+ + N++ +LG+ P+ D C GC LN Q E + K
Sbjct: 510 IDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC-LNEAVQLFNEMVHK- 567
Query: 341 VECVEKSNSKLGYVVKL--LLEEQDIEGDFKKEATELFNSISKDVKKAYC-NCLIDLCVN 397
S K+ Y L L++ ++ F +A + + + D+ +C C I N
Sbjct: 568 ----GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL---FCYTCFISGFCN 620
Query: 398 LNLLENA 404
LN++ A
Sbjct: 621 LNMMPEA 627
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 22/284 (7%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCL--NVYEEMKAIGVKPNMITYNNLLDTMGRA 156
AR + R+ PN + L A + G L ++E++ A PN+ T+N ++D + +
Sbjct: 146 ARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKE 201
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ ++++ M + G P+ T+ SL+ YG+ ++ + EM+ G + V Y
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTY 261
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N L+ G + A+ F MK E + TFS+ + G V EA +F +M
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMK-REGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--- 333
G N F T LI KA R DD + L+ + G+ LNV+T T
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP---------LNVVTYTVLVD 371
Query: 334 ---KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATE 374
KE E V + K G LL I G F + +E
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 119/251 (47%), Gaps = 4/251 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++LI YG G D + EEM+ G K +++TYN L++ + R +
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYF 281
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ N T+++ + A+ + + + ++ +M+ +GM L+ Y L+
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A + ++M + + T++ ++ +C R KV+EAE + M +AG N
Sbjct: 342 GRLDDAIVLLDEM-VRQGVPLNVVTYTVLVDGLCKER-KVAEAEDVLRMMEKAGVRANEL 399
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
+ T+LI + + ++ + L+ + G+ D G L+ + K +E L+ +
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 345 EKSNSKLGYVV 355
++S + Y++
Sbjct: 460 DESGLEPNYII 470
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N+ +D + + LI+ D ++ +M G++PN I Y ++D ++ +
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +++ D+G PN TY +L+ +A ++ +S + +M++ G+ +V Y L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G +EA ++F +M + D +++++ +G + +A A+ +M+++G
Sbjct: 545 VDGLCKNGCLNEAVQLFNEM-VHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+ +LF T I + + + + GI PD CL+ + ++LG
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI-----SKYQKLGN 658
Query: 340 LVECV 344
L E +
Sbjct: 659 LEEAI 663
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ +I G +++ MK +G P+++T+N+L+D G+ +V+ +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
+EM +G + TY +L+ + + E + MK +G+ +V ++T + A C
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G EA ++F M+ + +T++ +I G++ +A + +EM+ G N+
Sbjct: 306 E-GLVREAMKLFAQMR-VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL--NVMTQTPKEELGKLVE 342
T L+ K ++ + L + + G+ ++ L+ + M + ++ LG L E
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 77/195 (39%), Gaps = 44/195 (22%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
K P A + +K D+ PN + LI AG+ D ++ + +M+ +G+
Sbjct: 483 KVPEAIAMLQKILDSG-------FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN+ Y L+D + + + ++ EM G+S + Y +LL Y + D ++
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595
Query: 201 YREMKEKGMQLSV-----------------------------------TLYNTLLAMCAD 225
+M + G+QL + +YN L++
Sbjct: 596 KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQK 655
Query: 226 VGYTDEAFEIFEDMK 240
+G +EA + ++M+
Sbjct: 656 LGNLEEAISLQDEME 670
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 3/236 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++WR P+ ++ +I +G AG + +N+ ++M + P+ TYNNL++ G +
Sbjct: 178 QEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 237
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L A+ LS + MK ++ T N +
Sbjct: 238 KEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIV 297
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + D+A EIF M+ ++ C PD TF+S+I + S G+V EA FN M+
Sbjct: 298 IHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAE 357
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
G +PN+ +LI Y ++ N + + G PD LLN ++ K
Sbjct: 358 GLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQK 413
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 38/250 (15%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ LI Y G + + E+K G +P++++Y +LL+ GR+++P + +
Sbjct: 359 LKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKAR 418
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ------------- 210
I+ M N L PN +Y +L+ AYG D + + REM+++G+Q
Sbjct: 419 QIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAAC 478
Query: 211 ----------------------LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
L+ YN + C +VG D+A +++ M+ + + D
Sbjct: 479 GRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKK-IKTD 537
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
S T++ +I+ C K EA + E++ + V +S I Y K + + N
Sbjct: 538 SVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFN 597
Query: 309 RLPELGITPD 318
+ G PD
Sbjct: 598 LMKSSGCYPD 607
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+++I LY G + C + M A G+KPN+++YN L+ + +
Sbjct: 327 DVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFF 386
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ NG P+ +Y SLL AYGR++ ++ MK ++ ++ YN L+
Sbjct: 387 NEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSN 446
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRGKV 265
G +A +I +M+ E QP+ + +++ C C KV
Sbjct: 447 GLLADAIKILREME-QEGIQPNVVSICTLLAACGRCSRKV 485
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 6/234 (2%)
Query: 95 YDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+D RN ++ PN +++ LI YG+ G + + EM+ G++PN+++ LL
Sbjct: 421 FDRMKRN---KLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAA 477
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
GR R ++ T+ G+ N Y + + + + + +Y+ M++K ++
Sbjct: 478 CGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTD 537
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
Y L++ C + EA E++ + +SS I S +G++ EAE+ F
Sbjct: 538 SVTYTVLISGCCKMSKYGEALSFMEEIMHLK-LPLSKEVYSSAICAYSKQGQIVEAESTF 596
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
N M +G P++ T+++ Y A+ + + I D C L+
Sbjct: 597 NLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALM 650
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S+ I Y G + + MK+ G P+++TY +LD A+ + +++EM
Sbjct: 575 VYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEM 634
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + + A+L+R++ + LS+ M+EK + S T++ +++ C+ +
Sbjct: 635 EASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDW 694
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A ++ + ++ S S + + GK+ +F +ML +G + NL +
Sbjct: 695 RTAVDMIKYIEPSLPV-ISSGCLNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSI 753
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITP 317
L++ + + L + + GI P
Sbjct: 754 LLKNLLSSGNWRKYLEVLQWMEDAGIHP 781
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 68/154 (44%)
Query: 89 KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
K+K + T A +++ A++ I G +D + +Y+ M+ +K + +TY
Sbjct: 484 KVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTV 543
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L+ + + + + +E+ L + Y+S + AY + + S + MK G
Sbjct: 544 LISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSG 603
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
V Y +L ++A+ +FE+M++S
Sbjct: 604 CYPDVVTYTAMLDAYNAAENWEKAYALFEEMEAS 637
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 90/220 (40%), Gaps = 11/220 (5%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R +K + D ++ LI + L+ EE+ + + + Y++ + + +
Sbjct: 530 RKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQI 589
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ + M +G P+ TY ++L AY A E +++ EM+ ++L L
Sbjct: 590 VEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAAL 649
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G + E M+ E D+ F M++ CS A M +
Sbjct: 650 MRSFNKGGQPGRVLSLAESMREKEIPFSDT-IFFEMVSACSILQDWRTAVDMIKYI---- 704
Query: 280 FEPNLFVLTS-----LIQCYGKAQRTDDVVRALNRLPELG 314
EP+L V++S + GK+ + + +++ ++ G
Sbjct: 705 -EPSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKMLASG 743
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 120/231 (51%), Gaps = 7/231 (3%)
Query: 101 NEK---WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
NEK ++ D F +I +Y AG++ ++ +M G+ + +T+N+L+ K
Sbjct: 240 NEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETNYK 299
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V +IY +M L P+ +Y+ L++AYG+AR E+ L+V+ EM + G++ + YN
Sbjct: 300 ---EVSSIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYN 356
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G +EA +F+ M+ +PD ++++M+ + AE F + E
Sbjct: 357 ILIDAFAISGLVEEAHTVFKAMRR-HRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKE 415
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
G +PN+ V +L++ Y K + V+R R+ G+ P+ +++V
Sbjct: 416 DGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDV 466
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 113/229 (49%), Gaps = 9/229 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F L+ YG G+F V + M G KP++I+ L++ GRAK+ + +
Sbjct: 138 WNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAE 197
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM---KEKGMQLSVTLYNTLL 220
+++ M +G P+ TY +L+++ ++ +++ ++ K + +++ ++
Sbjct: 198 AVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQP-DSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
M G +A ++F M SE P + TF+S+++ + +VS +++++M
Sbjct: 258 YMYKKAGDYAQARKLFAQM--SERGIPLSTVTFNSLMSFETNYKEVS---SIYDQMQRTA 312
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+P++ + LI+ YGKA+R ++ + + + G+ P + L++
Sbjct: 313 LKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDA 361
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S LIK YG A + L V+EEM GV+P +YN L+D + + T++
Sbjct: 316 DVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVF 375
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + + P+ +Y +++ AY A + +R +KE G++ +V +Y TL+ + +
Sbjct: 376 KAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKL 435
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ ++E M+ + +P+ +++++ + A F EM G+
Sbjct: 436 NNVERVMRVYERMR-MQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGY 488
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
S L E+++ + R++P+ +++T++ Y A + DG + +K G+KPN++
Sbjct: 365 SGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVV 424
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L+ + +V +Y+ M G+ PN Y +++ +GR + + ++EM+
Sbjct: 425 YGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEME 484
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+G N LL++ +EA E+ + +PD T+ I K
Sbjct: 485 ARGYPADKKAKNILLSLAKTPEEQEEANELTGNCAIQLEAKPDGTTYGLEINGTGNEYKH 544
Query: 266 SEAEAMFNEMLEAG 279
+ +A + +L+
Sbjct: 545 GQNDAGHDSLLDGA 558
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 23/307 (7%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI AG D + + +EM GV N++TY L+D + + ++ + + + + M
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ N Y +L+ + + E L + EMK KG++L ++LY L+ +V D
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + M S +P+ +++M+ C GKV EA AM ++L++GF+PN+ +L
Sbjct: 451 EAKSLLTKMDES-GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCAL 509
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC--GCLLNVMTQTPKEELGKL 340
I KA D+ + N++ +LG+ P+ D C GC LN Q E + K
Sbjct: 510 IDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGC-LNEAVQLFNEMVHK- 567
Query: 341 VECVEKSNSKLGYVVKL--LLEEQDIEGDFKKEATELFNSISKDVKKAYC-NCLIDLCVN 397
S K+ Y L L++ ++ F +A + + + D+ +C C I N
Sbjct: 568 ----GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL---FCYTCFISGFCN 620
Query: 398 LNLLENA 404
LN++ A
Sbjct: 621 LNMMPEA 627
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 22/284 (7%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCL--NVYEEMKAIGVKPNMITYNNLLDTMGRA 156
AR + R+ PN + L A + G L ++E++ A PN+ T+N ++D + +
Sbjct: 146 ARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKE 201
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ ++++ M + G P+ T+ SL+ YG+ ++ + EM+ G + V Y
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTY 261
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N L+ G + A+ F MK E + TFS+ + G V EA +F +M
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMK-REGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--- 333
G N F T LI KA R DD + L+ + G+ LNV+T T
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP---------LNVVTYTVLVD 371
Query: 334 ---KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATE 374
KE E V + K G LL I G F + +E
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 124/265 (46%), Gaps = 4/265 (1%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+S +R + D F++LI YG G D + EEM+ G K +++TYN L++
Sbjct: 208 RSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINC 267
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ R + M G+ N T+++ + A+ + + + ++ +M+ +GM L+
Sbjct: 268 FCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAM 271
Y L+ G D+A + ++M + + T++ ++ +C R KV+EAE +
Sbjct: 328 EFTYTCLIDGTCKAGRLDDAIVLLDEM-VRQGVPLNVVTYTVLVDGLCKER-KVAEAEDV 385
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
M +AG N + T+LI + + ++ + L+ + G+ D G L+ +
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445
Query: 332 TPK-EELGKLVECVEKSNSKLGYVV 355
K +E L+ +++S + Y++
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYII 470
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N+ +D + + LI+ D ++ +M G++PN I Y ++D ++ +
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +++ D+G PN TY +L+ +A ++ +S + +M++ G+ +V Y L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G +EA ++F +M + D +++++ +G + +A A+ +M+++G
Sbjct: 545 VDGLCKNGCLNEAVQLFNEM-VHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+ +LF T I + + + + GI PD CL+ + ++LG
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI-----SKYQKLGN 658
Query: 340 LVECV 344
L E +
Sbjct: 659 LEEAI 663
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ +I G +++ MK +G P+++T+N+L+D G+ +V+ +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
+EM +G + TY +L+ + + E + MK +G+ +V ++T + A C
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G EA ++F M+ + +T++ +I G++ +A + +EM+ G N+
Sbjct: 306 E-GLVREAMKLFAQMR-VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL--NVMTQTPKEELGKLVE 342
T L+ K ++ + L + + G+ ++ L+ + M + ++ LG L E
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 85/215 (39%), Gaps = 44/215 (20%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
K P A + +K D+ PN + LI AG+ D ++ + +M+ +G+
Sbjct: 483 KVPEAIAMLQKILDSG-------FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN+ Y L+D + + + ++ EM G+S + Y +LL Y + D ++
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595
Query: 201 YREMKEKGMQLSV-----------------------------------TLYNTLLAMCAD 225
+M + G+QL + +YN L++
Sbjct: 596 KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQK 655
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+G +EA + ++M+ DS T + ++C+
Sbjct: 656 LGNLEEAISLQDEMERVLPSCTDSDTATDAGSVCT 690
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 24/334 (7%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ + + Y +G +N +E+M+ G+K +N LLDT+ ++++ + ++ +M
Sbjct: 184 FALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMK 243
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
P+ +Y LL +G+ + VYREMK++G + V Y L+ V D
Sbjct: 244 IRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYD 303
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A E+F +M+ S+NCQP F ++I ++SEA F +GF P ++
Sbjct: 304 DAIELFREME-SKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAV 362
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--------EELGKLVE 342
+ Y + R DD R ++ + + G+ P+ R +L+ + + K E++ E
Sbjct: 363 VGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEE 422
Query: 343 CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI-SKDVKKA--YCNCLIDLCVNLN 399
C E + S +V++ +E A ++++ + +K V + LI+ + N
Sbjct: 423 C-EPTVSTYDIIVRMFCNMDKVES-----AIKVWDRMKAKGVHPGMHMFSILINSLCHEN 476
Query: 400 LLENACKLLELGLTLEVYTDIQSRSPTQWSLHLK 433
L+ ACK + L D+ R P HLK
Sbjct: 477 KLDIACKYFQEML------DVGIRPPAALFSHLK 504
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 99/218 (45%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++E + D + LI Y +D + ++ EM++ +P+ + L++ +G +R
Sbjct: 278 KDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRL 337
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +G +P TY +++ AY + +D + EM++ G+ + Y+ +
Sbjct: 338 SEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDII 397
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L T EAF +FE M S E C+P T+ ++ + KV A +++ M G
Sbjct: 398 LHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKG 457
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P + + + LI + D + + ++GI P
Sbjct: 458 VHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRP 495
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ F TLI G+ L + KA G P TYN ++ + R +
Sbjct: 321 PHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVD 380
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK-EKGMQLSVTLYNTLLAMCADV 226
EM +G+ PN TY +L +A + SV+ +M E+ + +V+ Y+ ++ M ++
Sbjct: 381 EMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNM 440
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+ A ++++ MK+ + P FS +I K+ A F EML+ G P +
Sbjct: 441 DKVESAIKVWDRMKA-KGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAAL 499
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ L Q + R D VV ++ +L TP
Sbjct: 500 FSHLKQALIEDGRKDTVVLLAQKIDKLRKTP 530
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 99/224 (44%), Gaps = 3/224 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+++ P ++K AG + E K G N +YN L+D++G+ K+ +
Sbjct: 109 FKVSPALVLEVLKRLSNAGALALSFFKWAE-KQKGFMYNTESYNALIDSLGKIKQFNMIW 167
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +M G+ T+A + R Y R+ ++ ++ + +M++ G+++ T +N LL
Sbjct: 168 NLVNDMKRKGVLTK-ETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTL 226
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A +F+ MK PD +++ ++ + + + ++ EM + GFEP+
Sbjct: 227 IKSRQVLSAQNVFDKMKIRRFV-PDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPD 285
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ LI Y K ++ DD + + P L+N
Sbjct: 286 VVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLIN 329
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 120/230 (52%), Gaps = 7/230 (3%)
Query: 101 NEK---WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
NEK ++ D F +I +Y AG++ ++ +M G+ + +T+N+L+ K
Sbjct: 238 NEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETEYK 297
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V IY +M GL P+ +Y+ L++AYG+AR E+ L+V+ EM + G++ + YN
Sbjct: 298 ---EVSNIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYN 354
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
LL A G +EA +F M+ +PD ++++M+ +++ AE F + E
Sbjct: 355 ILLDAFAISGLVEEANTVFRAMR-RHRVEPDLCSYTTMVLAYVNASEMNGAEKFFRRIKE 413
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
G +PN+ V +L++ Y K + V+R R+ G+ P+ +++
Sbjct: 414 DGLKPNVVVYGTLMKGYSKLNNLEKVMRVYERMRIQGVEPNQTIYTTIMD 463
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 12/235 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S LIK YG A + L V+EEM GV+P +YN LLD + + T++
Sbjct: 314 DVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVEEANTVF 373
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + + P+ +Y +++ AY A +R +KE G++ +V +Y TL+ + +
Sbjct: 374 RAMRRHRVEPDLCSYTTMVLAYVNASEMNGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKL 433
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE---AEAMFNEMLEAGFEPN 283
++ ++E M+ + +P+ ++ TI +G+ S+ A F EM G+ P+
Sbjct: 434 NNLEKVMRVYERMR-IQGVEPNQTIYT---TIMDAQGRNSDFGNAVIWFKEMEARGYPPD 489
Query: 284 LF---VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
+L SL + + Q +D+V N +L + PD G + + QT E
Sbjct: 490 QKAKNILLSLAKTPEEEQEANDLVG--NGPVQLEVKPDGEVDGDDGHEVIQTDAE 542
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 112/228 (49%), Gaps = 9/228 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F L+ YG G+F V + M G +P++I+ L++ GR K+ + +
Sbjct: 136 WDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAE 195
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM---KEKGMQLSVTLYNTLL 220
+++ M +G P+ TY +L++ ++ +++ ++ K + +++ ++
Sbjct: 196 AVFRRMQTSGPQPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMI 255
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQP-DSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
M G +A ++F M SE P + TF+S+++ + +VS ++++M AG
Sbjct: 256 YMYKKAGDYAQARKLFAQM--SERGIPLSTVTFNSLMSFETEYKEVSN---IYDQMQRAG 310
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+P++ + LI+ YGKA+R ++ + + + G+ P + LL+
Sbjct: 311 LKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLD 358
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 115/212 (54%), Gaps = 3/212 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ ++ LI + + + +Y EM + G P +ITYN L+D + +A++ + ++
Sbjct: 472 PNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSL 531
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM + G P+ TYASL+R R + + L ++ E+ + G+Q+ V ++N L+
Sbjct: 532 TKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS 591
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEAF I+ +MK +NC P+ T+++++ G + +A +++ +L+ G +P++
Sbjct: 592 AGKVDEAFCIYLEMK-EKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIV 650
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ I+ RT + V LN + GI P
Sbjct: 651 TYNTRIKGLCSCNRTPEGVLLLNEVLATGIMP 682
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 110/269 (40%), Gaps = 35/269 (13%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRP 159
N + D ++ L+ G F+ + V+E++ + G PN+ TY +LD + + R
Sbjct: 221 NYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRF 280
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ M N + TY L+ R+ + VY +M + G+ L V++YN+L
Sbjct: 281 KEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSL 340
Query: 220 LAMCADVGYTDEAF----------------------------------EIFEDMKSSENC 245
+ +VG T EA+ E+ + +++ +C
Sbjct: 341 IKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASC 400
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD TF ++I G + A + + +G E ++F +S+I + K RT D
Sbjct: 401 SPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANE 460
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ + G P+ L+N + K
Sbjct: 461 VYKNMVKDGCKPNSHVYNALINGFCRVSK 489
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F TLI G + + E+ + G + ++ +Y+++++ + R +Y
Sbjct: 403 DKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY 462
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
K M +G PN + Y +L+ + R D + +Y EM G ++ YNTL+ +C
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKA 522
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
Y EA + ++M +PD T++S+I KV A +++E+L+AG + ++
Sbjct: 523 EKY-QEASSLTKEML-ERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVM 580
Query: 286 VLTSLIQCYGKAQRTDD 302
V LI A + D+
Sbjct: 581 VHNILIHGLCSAGKVDE 597
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 81/180 (45%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ PN+ TYN +L ++ + +++ + G++P+ TY++L+ + ++ L
Sbjct: 154 IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNAL 213
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
+ EM G+Q YN LL+ C G ++A +++E + P+ T+ M+
Sbjct: 214 DLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDG 273
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ EA +++ M+ + + LI ++ D R + + + G+ D
Sbjct: 274 LCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD 333
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 5/239 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KWR P+A + LI +G +G + +N+ E+M + P+ TYNNL++ G +
Sbjct: 162 QKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNW 221
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L AY LS + MK ++ T N +
Sbjct: 222 REALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNII 281
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +G ++A IF+ M+ C PD TF+S+I + S G++ A+F+ M+
Sbjct: 282 IYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAE 341
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM--TQTPKE 335
G +PN+ +L+ Y + + N + G+ PD LLN +Q PK+
Sbjct: 342 GLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKK 400
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 30/260 (11%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N R D ++++L+ YG + V+E MK +KPN+++YN ++D G
Sbjct: 374 KNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLL 433
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +EM +G+ PN + +LL A GR + V + + + ++L+ YN+
Sbjct: 434 AEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSA 493
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR----------------- 262
+ +VG ++A ++ M+ S+ PD+ TF+ +I+ C C+
Sbjct: 494 IGSYMNVGEFEKATSMYRSMRKSK-VIPDAVTFTVLISGC-CKMTKYCEALEFLSEMMDL 551
Query: 263 -----------GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
GK++EAE+MFN+M AG P++ T ++ Y A+ L +
Sbjct: 552 KIPMTKEAYSSGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEME 611
Query: 312 ELGITPDDRFCGCLLNVMTQ 331
E I PD C L+ +
Sbjct: 612 EYNIQPDTIACSALMRAFNK 631
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 88/197 (44%), Gaps = 17/197 (8%)
Query: 138 GVKPNMITYNNLLDTMG-RAKRPWQVKTIYKEMTD--------NGLSPNW------NTYA 182
G++ + I + G R ++ W V + +++ + GL W +
Sbjct: 44 GIRKDQIPQRYRIRVQGDRFQKDWSVSQVVQKVLELDHKSDDVEGLLNRWVGRFARKNFP 103
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVT-LYNTLLAMCADVGYTDEAFEIFEDMKS 241
L++ + E ++ V+R MK + + T +YN ++ + A +TD+A +F +M+
Sbjct: 104 LLIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYNMMIRLHARHNWTDQARGLFFEMQK 163
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
C+PD+ T +++I G+ A + +ML+ P+ +LI G +
Sbjct: 164 WR-CKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWR 222
Query: 302 DVVRALNRLPELGITPD 318
+ ++ ++ E G+ PD
Sbjct: 223 EALKLCKKMTENGVGPD 239
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 61/123 (49%)
Query: 120 TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
++G +++ +MK G P+++TY +L A+ + + +EM + + P+
Sbjct: 561 SSGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTI 620
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
++L+RA+ + L + M+EK + LS ++ +++ C+ + E+ + M
Sbjct: 621 ACSALMRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMVSACSLLRDWRTTIELIKLM 680
Query: 240 KSS 242
+SS
Sbjct: 681 ESS 683
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 8/240 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++T+I G +G D + ++EEMK +G PN TYN+LL R R + +
Sbjct: 169 PNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCL 228
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M D G P+ TY +++ GR + V+ EM+ KG YNT+L +
Sbjct: 229 FVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSK 288
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
A ++ + MK + C PD WT++ ++ G SEA +F+E+ AG PNL
Sbjct: 289 WSRRGRARDLLKTMKRA-GCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLV 347
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVECV 344
++LI YG+ ++ RA + G P+ +CG +M + K++ C+
Sbjct: 348 SFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCG----LMNSYSHHGMYKVLCCI 403
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 2/207 (0%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T+I + G G ++E M GV P++ Y LL + + +++ M +
Sbjct: 35 TIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94
Query: 173 GLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
G SPN TY +L+ A + Y D + ++ EMK+ G+Q + YN ++ C + D
Sbjct: 95 GCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDT 154
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A +I ++MK+ NC P+ ++++MI G++ EA +F EM E G PN + SL+
Sbjct: 155 ASQILKEMKAV-NCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLL 213
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
+ Y + R + + + + G PD
Sbjct: 214 KAYAREGRYEKAMCLFVGMEDEGCIPD 240
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 37/246 (15%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT-MGRAKRPWQVKTIYK 167
+A++ L+ Y G ++E MK G PN++TYN L++ RA R + +++
Sbjct: 66 HAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFE 125
Query: 168 EMTDNGLSPN---WN--------------------------------TYASLLRAYGRAR 192
EM G+ PN +N +Y +++ + GR+
Sbjct: 126 EMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSG 185
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ + ++ EMKE G + YN+LL A G ++A +F M+ E C PD +T+
Sbjct: 186 RLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGME-DEGCIPDLYTY 244
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+++I +C G +EAE +F EM G P+ +++ Y K R L +
Sbjct: 245 NTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKR 304
Query: 313 LGITPD 318
G TPD
Sbjct: 305 AGCTPD 310
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I + G G F V+ EM+ G P+ +TYN +LD + R + + +
Sbjct: 240 DLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLL 299
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M G +P+ TY LL A G+A + + ++ E+K G ++ ++ L+ M +
Sbjct: 300 KTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRL 359
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
GY +EA + +M+++ C P++ + ++
Sbjct: 360 GYFEEAERAWVEMRAT-GCVPNATAYCGLM 388
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 30/183 (16%)
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A ++F ++ + ++I+I GK+ A +F M +AG P++
Sbjct: 8 GARRQALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHA 67
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
T+L+ Y K + + E G +P NV+T L+ K
Sbjct: 68 YTALLSGYAKQGLLKEAWALFEAMKEKGCSP---------NVLTYNT------LINACTK 112
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
+L +V L E K+A N I+ NC+++ CV L+L + A +
Sbjct: 113 RAYRLPDLVGLFEE--------MKQAGVQPNDITY-------NCMVNACVCLSLFDTASQ 157
Query: 407 LLE 409
+L+
Sbjct: 158 ILK 160
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 126/242 (52%), Gaps = 6/242 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+ST+I + G +++ EM GVKP+++TYN ++D + +A+ + + +
Sbjct: 264 DVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVL 323
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++MT +G P+ TY+ ++ Y ++ ++REMK++G+ ++ N+ LA
Sbjct: 324 RQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKH 383
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + EA E F+ M +++ +PD +++ +++ + G ++ +FN M G N V
Sbjct: 384 GRSKEAAEFFDSM-TAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHV 442
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
T LI Y K DD + + + G++PD +++ ++ +G+L + +EK
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSR-----MGRLTDAMEK 497
Query: 347 SN 348
N
Sbjct: 498 FN 499
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 4/214 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ FS TL+ Y + G F + ++ MK+ G+ N + L+ + I
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLI 462
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
+ EM G+SP+ TY++++ + R D + + +M +G+Q + +Y++++ C
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCM 522
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +A E+ +M + +PD FSS+I G+V +A +F+ + G P +
Sbjct: 523 HGGLV-KAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGV 581
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI Y + D + L+ + +G+ PD
Sbjct: 582 ITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPD 615
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 8/250 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F++LI Y G D + + M+ +GV+P+++TYN LLD + R T+++EM
Sbjct: 584 FNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ 643
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN TY +L RA + EM E G ++V++Y +L D
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F+ + + N + ++MI + EA+ +F + +G PN +
Sbjct: 704 EAIILFQKL-GTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVM 762
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSK 350
I K +D + + + GI P R ++ ++ + K E+ K + K + K
Sbjct: 763 IINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE--KGEIAKAGNYLSKVDGK 820
Query: 351 LGYVVKLLLE 360
++LLE
Sbjct: 821 -----RILLE 825
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +ST+I + G + + +M A G++PN Y++++ + K +
Sbjct: 474 DVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELV 533
Query: 167 KEMTDNGL-SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM + G+ P+ ++S++ + + D ++ + G + V +N+L+
Sbjct: 534 SEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCL 593
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG D+AF+I + M+ +PD T+++++ G++++ +F EM G +PN
Sbjct: 594 VGKMDKAFKILDAMEVV-GVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTV 652
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP-KEELGKLVECV 344
++ +A RT + + + E G T G +L + + +E L + +
Sbjct: 653 TYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL 712
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSIS 380
N K + + + K+EA ELF +IS
Sbjct: 713 GTMNVKFSITILNTMINAMYKVQRKEEAKELFATIS 748
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 17/263 (6%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P TYN L+D RA+RP ++ + GL + T +LL+ A E+ ++V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214
Query: 201 Y-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITI 258
M E G + Y+ +L D + A ++ + M K C PD +S++I
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ +A ++F+EM G +P++ +I KA+ D L ++ G PD
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334
Query: 319 DRFCGCLLNVMTQTPKEELGKLVECVE--KSNSKLGYVVKLLLEEQDIEGDFK----KEA 372
C+++ LG+L E + + K G + ++ + K KEA
Sbjct: 335 TVTYSCMIH-----GYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEA 389
Query: 373 TELFNSISKDVKK----AYCNCL 391
E F+S++ K +YC L
Sbjct: 390 AEFFDSMTAKGHKPDIFSYCTLL 412
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 126/285 (44%), Gaps = 15/285 (5%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGV-KPNMITYNNLLDTMGRAKRPWQV 162
I PN +S++I+ + G + EM G+ +P+++ ++++++++ + R
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDA 565
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I+ TD G P T+ SL+ Y + + M+ G++ + YNTLL
Sbjct: 566 HDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDG 625
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G ++ +F +M+ + +P++ T+ M+ G+ A F+EM+E+G
Sbjct: 626 YFKNGRINDGLTLFREMQ-RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP-KEELGKLV 341
+ + ++ + D+ + +L + + ++N M + KEE +L
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744
Query: 342 ECVEKSN-----SKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+ S S G ++ LL++ +E +A +F+S+ K
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKDGGVE-----DANNMFSSMEK 784
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 124/244 (50%), Gaps = 4/244 (1%)
Query: 86 RASKLKEKSYDTRARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
R ++KE S+ N++ + +D ++TLIK Y GNF L ++ EM G+ P++I
Sbjct: 287 REGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVI 346
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY +L+ +M +A + +M GL PN TY +L+ + + Y + V +EM
Sbjct: 347 TYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEM 406
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG- 263
+ G SV YN L+ G +A + EDMK + PD ++S++++ CR
Sbjct: 407 IDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK-EKGLTPDVVSYSTVLS-GFCRSY 464
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
V EA + +M+ G +P+ +SLIQ + + +RT + + + +G+ PD+
Sbjct: 465 DVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYT 524
Query: 324 CLLN 327
L+N
Sbjct: 525 ALIN 528
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 105 RIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD----------- 151
++ PN F+ LI+ + AGN D L ++ M+ G PN++TYN L+D
Sbjct: 200 QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 152 ------------------------TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ R R ++ + EM G S + TY +L++
Sbjct: 260 FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + L ++ EM G+ SV Y +L+ G + A E + M+ C P
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLC-P 378
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+++++ S +G ++EA + EM++ GF P++ +LI + A + D + L
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVL 438
Query: 308 NRLPELGITPD 318
+ E G+TPD
Sbjct: 439 EDMKEKGLTPD 449
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 37/259 (14%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTIYK 167
+ F ++K Y D L++ +A G P +++YN +LD R+KR + ++K
Sbjct: 135 SVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM + +SPN TY L+R + A + L + M++KG +V YNTL+ +
Sbjct: 195 EMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLR 254
Query: 228 YTDEAFEIFEDMKSSENCQP-----------------------------------DSWTF 252
D+ FE+ M + + +P D T+
Sbjct: 255 KIDDGFELLRSM-ALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTY 313
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+++I G +A M EML G P++ TSLI KA + L+++
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRV 373
Query: 313 LGITPDDRFCGCLLNVMTQ 331
G+ P++R L++ +Q
Sbjct: 374 RGLCPNERTYTTLVDGFSQ 392
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST++ + + + D L V +M A G+KP+ ITY++L+ +R + ++
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLF 508
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM GL P+ TY +L+ AY + + ++ EM EKG+ V Y+ L+
Sbjct: 509 DEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGKVSEAEAM 271
T EA + + E+ P T+ ++I CS +G ++EA+ +
Sbjct: 569 ARTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 272 FNEMLEAGFEPN 283
F MLE +P+
Sbjct: 628 FESMLEKNHKPD 639
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 47/221 (21%)
Query: 101 NEKWRI----DPNAFS-------TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
NE +R+ N FS LI + AG + V E+MK G+ P++++Y+ +
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTV 456
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L R+ + + ++M G+ P+ TY+SL++ + R ++ ++ EM G+
Sbjct: 457 LSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGL 516
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
PD +T++++I G + +A
Sbjct: 517 ------------------------------------PPDEFTYTALINAYCMEGDLQKAI 540
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ NEM+E G P++ + LI K RT + R L +L
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKL 581
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 112/212 (52%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + V++EMKA G +P+ +T+N+LLD G+A+R + +
Sbjct: 224 DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVI 283
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G P+ TY SL+ +Y + E +++ +EM+ KGM+ V Y TL++
Sbjct: 284 QEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRA 343
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A +++M + C+P+ T++++I + RGK E A+F+E AGF P++
Sbjct: 344 GKIDAAIVEYDEMVRN-GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVT 402
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ +G+ +V + + G P+
Sbjct: 403 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPE 434
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 2/245 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ +YG A D + V +EM+ +G P+++TYN+L+ + + Q +
Sbjct: 259 DKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALK 318
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G+ P+ TY +L+ RA + + Y EM G + ++ YN L+ M
Sbjct: 319 QEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVR 378
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E +F++ +S+ PD T+++++ + G SE +F EM +AG+ P
Sbjct: 379 GKFPEMMAVFDEFRSA-GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 437
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
SLI Y + D ++ R+ E GI PD +L+ + + + E+ KL +E
Sbjct: 438 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 497
Query: 346 KSNSK 350
+ + K
Sbjct: 498 ERDCK 502
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 115/210 (54%), Gaps = 8/210 (3%)
Query: 86 RASKLKEK--SYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
RA K+ YD RN PN ++ LIK++G G F + V++E ++ G P
Sbjct: 342 RAGKIDAAIVEYDEMVRNG---CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVP 398
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++T+N LL G+ +V ++KEM G P +TY SL+ +Y R + + +Y
Sbjct: 399 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIY 458
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+ M E G+ V+ YN +L+ A G ++A ++F +M+ +C+PD +++SS++ +
Sbjct: 459 KRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME-ERDCKPDEYSYSSLLHAYAN 517
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
++ + +A+ +++ EP+ +++ +L+
Sbjct: 518 AKRLDKMKALSDDIYSERIEPHNWLVKTLV 547
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTI 165
D A++ L+ + AG F + V+ M GV+P ++TYN +L + PW +V +
Sbjct: 153 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 212
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M ++G++P+ TY +L+ R ++ V+ EMK G + +N+LL +
Sbjct: 213 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 272
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA E+ ++M+ C P T++S+I+ G + +A A+ EM G +P++
Sbjct: 273 ARRHDEAIEVIQEMERV-GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+LI +A + D + + + G P+
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPN 364
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK GV P+ TYN L+ R + ++ EM +G P+ T+ SLL YG+AR
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 275
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ + V +EM+ G SV YN+L++ G ++A + ++M+ + +PD T++
Sbjct: 276 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME-VKGMKPDVVTYT 334
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I+ GK+ A ++EM+ G +PNL +LI+ +G + +++ +
Sbjct: 335 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSA 394
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
G PD LL V Q L V V K K GY+
Sbjct: 395 GFVPDIVTWNTLLAVFGQN---GLDSEVSGVFKEMKKAGYI 432
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
E+ GV + + M RA R + + D P+ Y +L+ A+ RA
Sbjct: 113 ELHGEGVLHHPRVLATAIRVMARAGRLAEASA----LLDAAPGPDAGAYTALVSAFSRAG 168
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT-DEAFEIFEDMKSSENCQPDSWT 251
D ++V+R M + G+Q ++ YN +L + + + E E+ MK PD +T
Sbjct: 169 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMK-EHGVAPDRYT 227
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I+ C R EA +F+EM +GFEP+ SL+ YGKA+R D+ + + +
Sbjct: 228 YNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEME 287
Query: 312 ELGITP 317
+G P
Sbjct: 288 RVGCPP 293
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 3/196 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG-RAKRPWQVKTI 165
D ++TLI AG D + Y+EM G KPN+ TYN L+ G R K P ++ +
Sbjct: 329 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFP-EMMAV 387
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E G P+ T+ +LL +G+ + V++EMK+ G Y +L++ +
Sbjct: 388 FDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 447
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A +I++ M + PD T++++++ + G+ +AE +F EM E +P+ +
Sbjct: 448 CGLFDLAMQIYKRMMEA-GIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEY 506
Query: 286 VLTSLIQCYGKAQRTD 301
+SL+ Y A+R D
Sbjct: 507 SYSSLLHAYANAKRLD 522
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR-------- 158
D + ++ ++ G ++ ++ EM+ KP+ +Y++LL AKR
Sbjct: 469 DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 528
Query: 159 -----------PWQVKTI----------------YKEMTDNGLSPNWNTYASLLRAYGRA 191
W VKT+ + E+ S + N +++ YG+
Sbjct: 529 DDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKN 588
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
R + MKE + LS YN+L+ M + +G ++ I ++KSS +PD ++
Sbjct: 589 RMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS-GVRPDRYS 647
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I +G++ EA +F+EM +G +P++ ++ Y ++ + + +
Sbjct: 648 YNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMV 707
Query: 312 ELGITPDDR 320
G P++R
Sbjct: 708 TQGCKPNER 716
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 9/217 (4%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
K+ + VN K ++ EK++ R ++ +D N + ++ +YG + M
Sbjct: 544 KTLVLVNSKVNNLAE-AEKAF-LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLM 601
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K + + TYN+L+ R + + I E+ +G+ P+ +Y +++ AYGR
Sbjct: 602 KESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQM 661
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ ++ EMK G++ V YN + +EA E+ M ++ C+P+ T++S
Sbjct: 662 KEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM-VTQGCKPNERTYNS 720
Query: 255 MITICSCRGKVSEAEAMFNEM--LEAGF----EPNLF 285
++ GK+++A+ + + L G+ + NLF
Sbjct: 721 IVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLF 757
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 9/239 (3%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEM 134
+ + N K R K+K S D + RI+P+ + TL+ + N + E+
Sbjct: 513 HAYANAK--RLDKMKALSDDIYSE----RIEPHNWLVKTLVLVNSKVNNLAEAEKAFLEL 566
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+ ++ N ++ G+ + +V+ I M ++ ++ + TY SL+ Y R
Sbjct: 567 RQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDC 626
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
E ++ E+K G++ YNT++ G EA +F +MK S +PD T++
Sbjct: 627 EKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GLKPDVVTYNI 685
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ EA + M+ G +PN S+++ Y + + D ++ LP+L
Sbjct: 686 FVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 744
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVK 163
R+D A++T++ AG ++ L ++ E++ GV P ++TYN +LD GR R W ++
Sbjct: 171 RLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIV 230
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM G+ P+ T ++++ A R ++ ++ + ++K +G V YN LL +
Sbjct: 231 ALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVF 290
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + +M+ + CQPD+ T++ + + G EA + M G PN
Sbjct: 291 GKAGNYTEALRVLGEMEQN-GCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPN 349
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F +++ YG + D+ + +++ + G P+
Sbjct: 350 AFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPN 384
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AGN+ L V EM+ G +P+ +TYN L T RA + M
Sbjct: 283 YNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMA 342
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL PN TY +++ AYG ++ L+++ +MK+ G +V YN +L M
Sbjct: 343 SKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFT 402
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E+ +M S C P+ T+++M+ +C RG + M G E + +L
Sbjct: 403 VMLEMLGEMSRS-GCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTL 461
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ + + N + G TP LLNV+++
Sbjct: 462 IAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSR 502
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNAF+ T++ YG G D L ++++MK G PN+ TYN +L +G+ R + +
Sbjct: 348 PNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEM 407
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM+ +G +PN T+ ++L G+ + V M+ G++LS YNTL+A
Sbjct: 408 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGR 467
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G AF+++ +M S+ P T+++++ + S +G S A+++ ++M GF+PN
Sbjct: 468 CGSRTNAFKMYNEMTSA-GFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQ 526
Query: 286 VLTSLIQCYGKA 297
+ L+QCY K
Sbjct: 527 SYSLLLQCYAKG 538
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 124/247 (50%), Gaps = 5/247 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG-NFDGCLNVY 131
++Y V RA + E++ + A + + P ++ ++ +YG G ++ + +
Sbjct: 175 RAYTTVLHALSRAGRY-ERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALL 233
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
+EM+A GV+P+ T + ++ R + ++++ G +P TY +LL+ +G+A
Sbjct: 234 DEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKA 293
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ L V EM++ G Q YN L A G+ +EA + M +S+ P+++T
Sbjct: 294 GNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM-ASKGLLPNAFT 352
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++++T GKV EA A+F++M + GF PN+ ++ GK R ++ L +
Sbjct: 353 YNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMS 412
Query: 312 ELGITPD 318
G TP+
Sbjct: 413 RSGCTPN 419
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLD 151
+S ++ R + ++ + ++S L++ Y GN G + E+ G V P+ + L+
Sbjct: 510 QSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVI 569
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ +R ++T ++E+ G +P+ + S+L Y + V+ +K G+
Sbjct: 570 ANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSP 629
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ YN+L+ M A + EA +I +K S+ +PD +++++I +G V EA+ +
Sbjct: 630 DLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRV 689
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+EM+ G P +L+ Y + + + + + G+ P
Sbjct: 690 LSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKP 735
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 6/215 (2%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T++ + G G D V E M++ GV+ + TYN L+ GR +
Sbjct: 418 PNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKM 477
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EMT G +P TY +LL R S+ +M+ KG + + Y+ LL A
Sbjct: 478 YNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAK 537
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS--CRGKVSEAEAMFNEMLEAGFEPN 283
G I ++ S P SW + I + CR ++ E F E+ G+ P+
Sbjct: 538 GGNVAGIAAIENEVYGSGAVFP-SWVILRTLVIANFKCR-RLDGMETAFQEVKARGYNPD 595
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L + S++ Y K + + G++PD
Sbjct: 596 LVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPD 630
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 112/212 (52%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + V++EMKA G +P+ +T+N+LLD G+A+R + +
Sbjct: 242 DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVI 301
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G P+ TY SL+ +Y + E +++ +EM+ KGM+ V Y TL++
Sbjct: 302 QEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRA 361
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A +++M + C+P+ T++++I + RGK E A+F+E AGF P++
Sbjct: 362 GKIDAAIVEYDEMVRN-GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVT 420
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ +G+ +V + + G P+
Sbjct: 421 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPE 452
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 2/245 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ +YG A D + V +EM+ +G P+++TYN+L+ + + Q +
Sbjct: 277 DKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALK 336
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G+ P+ TY +L+ RA + + Y EM G + ++ YN L+ M
Sbjct: 337 QEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVR 396
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E +F++ +S+ PD T+++++ + G SE +F EM +AG+ P
Sbjct: 397 GKFPEMMAVFDEFRSA-GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
SLI Y + D ++ R+ E GI PD +L+ + + + E+ KL +E
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515
Query: 346 KSNSK 350
+ + K
Sbjct: 516 ERDCK 520
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 115/210 (54%), Gaps = 8/210 (3%)
Query: 86 RASKLKEK--SYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
RA K+ YD RN PN ++ LIK++G G F + V++E ++ G P
Sbjct: 360 RAGKIDAAIVEYDEMVRNG---CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVP 416
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++T+N LL G+ +V ++KEM G P +TY SL+ +Y R + + +Y
Sbjct: 417 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIY 476
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+ M E G+ V+ YN +L+ A G ++A ++F +M+ +C+PD +++SS++ +
Sbjct: 477 KRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME-ERDCKPDEYSYSSLLHAYAN 535
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
++ + +A+ +++ EP+ +++ +L+
Sbjct: 536 AKRLDKMKALSDDIYSERIEPHNWLVKTLV 565
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTI 165
D A++ L+ + AG F + V+ M GV+P ++TYN +L + PW +V +
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 230
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M ++G++P+ TY +L+ R ++ V+ EMK G + +N+LL +
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA E+ ++M+ C P T++S+I+ G + +A A+ EM G +P++
Sbjct: 291 ARRHDEAIEVIQEMERV-GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+LI +A + D + + + G P+
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPN 382
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK GV P+ TYN L+ R + ++ EM +G P+ T+ SLL YG+AR
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ + V +EM+ G SV YN+L++ G ++A + ++M+ + +PD T++
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME-VKGMKPDVVTYT 352
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I+ GK+ A ++EM+ G +PNL +LI+ +G + +++ +
Sbjct: 353 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSA 412
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
G PD LL V Q L V V K K GY+
Sbjct: 413 GFVPDIVTWNTLLAVFGQN---GLDSEVSGVFKEMKKAGYI 450
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
E+ GV + + M RA R + + D P+ Y +L+ A+ RA
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASA----LLDAAPGPDAGAYTALVSAFSRAG 186
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT-DEAFEIFEDMKSSENCQPDSWT 251
D ++V+R M + G+Q ++ YN +L + + + E E+ MK PD +T
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMK-EHGVAPDRYT 245
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I+ C R EA +F+EM +GFEP+ SL+ YGKA+R D+ + + +
Sbjct: 246 YNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEME 305
Query: 312 ELGITP 317
+G P
Sbjct: 306 RVGCPP 311
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 3/196 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG-RAKRPWQVKTI 165
D ++TLI AG D + Y+EM G KPN+ TYN L+ G R K P ++ +
Sbjct: 347 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFP-EMMAV 405
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E G P+ T+ +LL +G+ + V++EMK+ G Y +L++ +
Sbjct: 406 FDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 465
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A +I++ M + PD T++++++ + G+ +AE +F EM E +P+ +
Sbjct: 466 CGLFDLAMQIYKRMMEA-GIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEY 524
Query: 286 VLTSLIQCYGKAQRTD 301
+SL+ Y A+R D
Sbjct: 525 SYSSLLHAYANAKRLD 540
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR-------- 158
D + ++ ++ G ++ ++ EM+ KP+ +Y++LL AKR
Sbjct: 487 DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 546
Query: 159 -----------PWQVKTI----------------YKEMTDNGLSPNWNTYASLLRAYGRA 191
W VKT+ + E+ S + N +++ YG+
Sbjct: 547 DDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKN 606
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
R + MKE + LS YN+L+ M + +G ++ I ++KSS +PD ++
Sbjct: 607 RMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS-GVRPDRYS 665
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I +G++ EA +F+EM +G +P++ ++ Y ++ + + +
Sbjct: 666 YNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMV 725
Query: 312 ELGITPDDR 320
G P++R
Sbjct: 726 TQGCKPNER 734
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 9/217 (4%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
K+ + VN K ++ EK++ R ++ +D N + ++ +YG + M
Sbjct: 562 KTLVLVNSKVNNLAE-AEKAF-LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLM 619
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K + + TYN+L+ R + + I E+ +G+ P+ +Y +++ AYGR
Sbjct: 620 KESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQM 679
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ ++ EMK G++ V YN + +EA E+ M ++ C+P+ T++S
Sbjct: 680 KEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM-VTQGCKPNERTYNS 738
Query: 255 MITICSCRGKVSEAEAMFNEM--LEAGF----EPNLF 285
++ GK+++A+ + + L G+ + NLF
Sbjct: 739 IVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLF 775
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 9/239 (3%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEM 134
+ + N K R K+K S D + RI+P+ + TL+ + N + E+
Sbjct: 531 HAYANAK--RLDKMKALSDDIYSE----RIEPHNWLVKTLVLVNSKVNNLAEAEKAFLEL 584
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+ ++ N ++ G+ + +V+ I M ++ ++ + TY SL+ Y R
Sbjct: 585 RQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDC 644
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
E ++ E+K G++ YNT++ G EA +F +MK S +PD T++
Sbjct: 645 EKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GLKPDVVTYNI 703
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ EA + M+ G +PN S+++ Y + + D ++ LP+L
Sbjct: 704 FVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 762
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 7/231 (3%)
Query: 101 NEK---WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
NEK ++ D F +I +Y AG++ ++ +M G+ + +T+N+L+ K
Sbjct: 240 NEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETDYK 299
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V IY +M L P+ +Y+ L++AYG+AR E+ L+V+ EM + G++ + YN
Sbjct: 300 ---EVSNIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYN 356
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G +EA +F+ M+ +PD ++++M+ + AE F + E
Sbjct: 357 ILIDAFAISGLVEEAHTVFKAMRR-HRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKE 415
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
G +PN+ V +L++ Y K + V+R R+ G+ P+ +++V
Sbjct: 416 DGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDV 466
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 112/229 (48%), Gaps = 9/229 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F L+ YG G+F V + M G KP++I+ L++ GRAK+ + +
Sbjct: 138 WNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAE 197
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM---KEKGMQLSVTLYNTLL 220
+++ M +G P+ TY +L+++ ++ +++ ++ K + +++ ++
Sbjct: 198 AVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQP-DSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
M G +A ++F M SE P + TF+S+++ + +VS ++++M
Sbjct: 258 YMYKKAGDYAQARKLFAQM--SERGIPLSTVTFNSLMSFETDYKEVSN---IYDQMQRTA 312
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+P++ + LI+ YGKA+R ++ + + + G+ P + L++
Sbjct: 313 LKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDA 361
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S LIK YG A + L V+EEM GV+P +YN L+D + + T++
Sbjct: 316 DVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVF 375
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + + P+ +Y +++ AY A + +R +KE G++ +V +Y TL+ + +
Sbjct: 376 KAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKL 435
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ ++E M+ + +P+ +++++ + A F EM G+
Sbjct: 436 NNVERVMRVYERMR-MQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGY 488
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
S L E+++ + R++P+ +++T++ Y A + DG + +K G+KPN++
Sbjct: 365 SGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVV 424
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L+ + +V +Y+ M G+ PN Y +++ +GR + + ++EM+
Sbjct: 425 YGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEME 484
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+G N LL++ +EA E+ + +PD T+ I K
Sbjct: 485 ARGYPADKKAKNILLSLAKTPEEQEEANELTGNCAIQLEAKPDGTTYGLEINGTGNEYKH 544
Query: 266 SEAEAMFNEMLEAG 279
+ +A + +L+
Sbjct: 545 GQNDAGHDSLLDGA 558
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 4/263 (1%)
Query: 74 PKSYIWVNPKSPRASKLKEKSYDTRARNEKWR--IDPNAFSTLIKLYGTAGNFDGCLNVY 131
P+ +I + + ++ L EKS + R E R + +A+++LI + AG L VY
Sbjct: 54 PRIFIEL-ARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVY 112
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
M G++P+ T+N L++ +AKR V +++EM + SPN TY+ L+ A +
Sbjct: 113 RVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKC 172
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
E L V+ +MK +G + ++ Y +++ G+ D+AF +FE+M +SE
Sbjct: 173 GGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEM-TSEGLVATRVV 231
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++S+I G+ A +F EML G +P+ TSL+ G A R + R
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR 291
Query: 312 ELGITPDDRFCGCLLNVMTQTPK 334
++G D L++ + ++ +
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKR 314
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ ++I G +G+ D ++EEM + G+ + YN+L+ +GR+ R +
Sbjct: 192 PNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKL 251
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM GL P+ T+ SL+ G A + +++E ++ G L V LYN L+
Sbjct: 252 FREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCK 311
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA+EIF +++ + PD +TF++++ G++ +A + +M AG P++
Sbjct: 312 SKRLDEAWEIFGELE-EDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVT 370
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V +LI K+ R ++ + L + LG PD
Sbjct: 371 VYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPD 403
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
++ + P F L + Y +AG + + + M+ YN+L+D +A +
Sbjct: 49 RYILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKA 108
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+Y+ M +GL P+ T+ L+ A+ +A+ + ++ EM+ + +V Y+ L+
Sbjct: 109 LAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDA 168
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G ++A ++F DMK S C+P+ +T++SMI G V +A +F EM G
Sbjct: 169 VCKCGGVEKALKVFLDMK-SRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVA 227
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V SLI G++ R D + + G+ PD
Sbjct: 228 TRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPD 263
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 6/235 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ G AG +++E + +G ++ YN L+DT+ ++KR + I+
Sbjct: 263 DHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIF 322
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ ++GL P+ T+ +L+ ++ D + +MK G VT+YNTL+
Sbjct: 323 GELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKS 382
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA ++ +M+S +PD T++++I G++ +A +F E+ GF N
Sbjct: 383 GRVEEAGQLLLEMQSL-GYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVT 440
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELG----ITPDDRFCGCLLNVMTQTPKEEL 337
+++ A R D+ + N + + I PD LLN Q EL
Sbjct: 441 YNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSEL 495
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
AR+ +D N ++ LI + D ++ E++ G+ P++ T+N L+D + ++ R
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR 349
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ +M G +P+ Y +L+ ++ E+ + EM+ G + V YNT
Sbjct: 350 IHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNT 409
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM--- 275
L+ G ++A +FE++ S ++ T+++++ G+V EA +FN M
Sbjct: 410 LIDESCKGGRIEDALRLFEEI--SAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQE 467
Query: 276 -LEAGFEPNLFVLTSLI 291
++ +P+ T+L+
Sbjct: 468 TVDGVIDPDFVTYTTLL 484
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G P++ L++ +G A+R + + + E+ + + L R Y A E +
Sbjct: 14 GGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKS 73
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS--------------- 242
+ + M+ L+ + YN+L+ GYT +A ++ M S
Sbjct: 74 VEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNA 133
Query: 243 -------------------ENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEP 282
+NC P+ T+S +I +C C G V +A +F +M G P
Sbjct: 134 FKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKC-GGVEKALKVFLDMKSRGCRP 192
Query: 283 NLFVLTSLIQCYGKAQRTD 301
N+F TS+I GK+ D
Sbjct: 193 NIFTYTSMIDGLGKSGHVD 211
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 125/249 (50%), Gaps = 4/249 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+++ +D A++T++ Y G ++ ++++E MK +G P ++TYN +LD G+ R W+
Sbjct: 204 QEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR 263
Query: 162 -VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + EM GL + T +++L A R + + E+K G + YN LL
Sbjct: 264 KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALL 323
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA + ++M+ + +C DS T++ ++ G EA + M + G
Sbjct: 324 QVFGKAGVYTEALSVLKEMEEN-SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE-ELGK 339
PN T++I YGKA + D+ ++ + E G P+ +L+++ + + E+ K
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 340 LVECVEKSN 348
++ C KSN
Sbjct: 443 ML-CDMKSN 450
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AG + L+V +EM+ + +TYN L+ RA + + + MT
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN TY +++ AYG+A ++ L ++ MKE G + YN +L++ ++
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E ++ DMKS+ C P+ T+++M+ +C +G +F EM GFEP+ +L
Sbjct: 439 EMIKMLCDMKSN-GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ D + + G LLN + +
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 106/263 (40%), Gaps = 38/263 (14%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP---- 159
+ PNA ++T+I YG AG D L ++ MK G PN TYN +L +G+ R
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 160 -----------------WQ--------------VKTIYKEMTDNGLSPNWNTYASLLRAY 188
W V +++EM G P+ +T+ +L+ AY
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
GR D +Y EM G VT YN LL A G + DMK S+ +P
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK-SKGFKPT 560
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
++S M+ + G E + N + E P+ +L +L+ K + RA
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 309 RLPELGITPDDRFCGCLLNVMTQ 331
+ G PD +L++ T+
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTR 643
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
RA E+++ T + ++ D F++++ ++ +D + E ++ G+ P+++T
Sbjct: 610 RALAGSERAF-TLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT 668
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN+L+D R W+ + I K + + L P+ +Y ++++ + R ++ + + EM
Sbjct: 669 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GK 264
E+G++ + YNT ++ +G E ++ E M + +C+P+ TF M+ CR GK
Sbjct: 729 ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM-AKNDCRPNELTF-KMVVDGYCRAGK 786
Query: 265 VSEA 268
SEA
Sbjct: 787 YSEA 790
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 21/252 (8%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEKSYDTRARNEK---WRIDPNAFSTLIKLYGTAGNFDGC 127
G SP W + +K +K + R K + D + F+TLI YG G+
Sbjct: 451 GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 510
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV-KTIYKEMTDNGLSPNWNTYASLLR 186
+Y EM G + TYN LL+ + R K W+ + + +M G P +Y+ +L+
Sbjct: 511 SKMYGEMTRAGFNACVTTYNALLNALAR-KGDWRSGENVISDMKSKGFKPTETSYSLMLQ 569
Query: 187 AYGRARYGEDTLSVYR---EMKEKGMQLSVTLYNTLLAM---CADVGYTDEAFEIFEDMK 240
Y + G + L + R +KE + S L TLL C + ++ AF +F+
Sbjct: 570 CYAK---GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK--- 623
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKA 297
+PD F+SM++I + +AE + + E G P+L SL+ Y G+
Sbjct: 624 -KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGEC 682
Query: 298 QRTDDVVRALNR 309
+ +++++ L +
Sbjct: 683 WKAEEILKTLEK 694
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 113/247 (45%), Gaps = 14/247 (5%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L+ G++ NV +MK+ G KP +Y+ +L + ++ I +
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ + P+W +LL A + R + + K+ G + + ++N++L++ D
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A I E ++ + PD T++S++ + RG+ +AE + + ++ +P+L ++
Sbjct: 649 QAEGILESIRE-DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-------EELGKLVEC 343
I+ + + + VR L+ + E GI P C+ T E+ ++EC
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRP------CIFTYNTFVSGYTAMGMFAEIEDVIEC 761
Query: 344 VEKSNSK 350
+ K++ +
Sbjct: 762 MAKNDCR 768
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 88/195 (45%), Gaps = 1/195 (0%)
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
G + K G KP+M+ +N++L R Q + I + + ++GLSP+ TY SL+
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y R + + +++ ++ + YNT++ G EA + +M +
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM-TERGI 732
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+P +T+++ ++ + G +E E + M + PN ++ Y +A + + +
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Query: 306 ALNRLPELGITPDDR 320
++++ DD+
Sbjct: 793 FVSKIKTFDPCFDDQ 807
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +S L+ Y AG ++ + +EM+A GVKP+ ++ +L R + WQ +
Sbjct: 333 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGDWQKAFAV 391
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ + Y ++ +G+ + + +M+E+G++ V +NTL+
Sbjct: 392 LREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCK 451
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A E+FE+M+ S NC P + T++ MI + + EAM +EM E G PN+
Sbjct: 452 GGRHDRAAELFEEMRES-NCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNII 510
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R + + + + G+ P L+N Q
Sbjct: 511 TYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 2/224 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
NA + LI GTAG ++ E G +KP YN LL R + +
Sbjct: 264 NAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLD 323
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM+ G++P+ TY+ L+ AY RA E + +EM+ G++ S +++ +LA D G
Sbjct: 324 EMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRG 383
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+AF + +M++S +PD ++ MI + A FN+M E G EP++
Sbjct: 384 DWQKAFAVLREMQAS-GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTW 442
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+LI + K R D + E P ++N++ +
Sbjct: 443 NTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGE 486
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 98/216 (45%), Gaps = 17/216 (7%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + ++ +I +G ++ + +M+ G++P+++T+N L+D + R +
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM ++ P TY ++ G + E ++ EMKE+G+ ++ Y TL+ +
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA + E MK ++ +P + +++ N + G P++
Sbjct: 521 RSGRYKEAIDCIEAMK-ADGLKPSPTMYHALV----------------NAYAQRGLRPDV 563
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
T+L++ + ++ D V + G PD +
Sbjct: 564 ITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRK 599
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R E D ++TLI + G D ++EEM+ P TYN +++ +G +
Sbjct: 429 KMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQE 488
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
V+ + EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 489 HWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYH 548
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G +PD T+++++ + + ++ EM+
Sbjct: 549 ALVNAYAQRG-----------------LRPDVITYTTLMKALIRVEQFDKVPVIYEEMIT 591
Query: 278 AGFEPN 283
+G P+
Sbjct: 592 SGCAPD 597
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR---EMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ P+ +Y+ LL + R D + R +++E ++ L++ L++ A
Sbjct: 181 LREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFAR 240
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
D A E+ ++ P S +++I+ G+V+EAEA+F E AG +P
Sbjct: 241 AALPDAALELLASAQAI-GLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRT 299
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVEC 343
+L++ Y + + + L+ + + G+ PD+ L++ T+ + E + L++
Sbjct: 300 RAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 344 VEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISKDVK--KAYCNCLIDLCVNLNL 400
+E K YV +L GD++K L + V+ + + N +ID N
Sbjct: 360 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419
Query: 401 LENAC----KLLELGLTLEVYT 418
L +A K+ E G+ +V T
Sbjct: 420 LGHAMDAFNKMREEGIEPDVVT 441
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 19/93 (20%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP-------------------NMITYNNLLD 151
++TL+ +YG +G + ++ E MKA G+KP ++ITY L+
Sbjct: 512 YTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLRPDVITYTTLMK 571
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+ R ++ +V IY+EM +G +P+ A L
Sbjct: 572 ALIRVEQFDKVPVIYEEMITSGCAPDRKARAML 604
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 112/213 (52%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ L+ + GN ++ E++++G P++ TYN LL+ R + P K +
Sbjct: 230 PNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEV 289
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M + G+ P+ +Y L+ A+GRA D +VY MKE G + ++ + LL+ A
Sbjct: 290 FQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAK 349
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA + ++++S +PD++ F+S+++ G++ E E++ M+ + +P++
Sbjct: 350 AGKVTEAERLVREIENS-GVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDIS 408
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L +LI Y + + N L G+TPD
Sbjct: 409 TLNTLINAYAQGGYIEKAEEVFNSLESKGLTPD 441
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 7/258 (2%)
Query: 76 SYIWVNPKSPRASKLKEKSYDTRARNEKWRIDP--NAFSTLIKLYGTAGNFDGCLNVYEE 133
+Y+ V KS R S+ + DT +K I P N F+ +I +YG A D +++
Sbjct: 167 TYLEVLGKSGRLSQAE----DTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRS 222
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ PN+ TY L++ R + + I+ E+ G P+ TY +LL AY R +
Sbjct: 223 MRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEH 282
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
V++ M E G++ YN L+ G T +A +++ MK + +P +
Sbjct: 283 PTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEA-GFKPTMKSHM 341
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+++ + GKV+EAE + E+ +G +P+ F+ SL+ YG + R D++ L +
Sbjct: 342 LLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSS 401
Query: 314 GITPDDRFCGCLLNVMTQ 331
PD L+N Q
Sbjct: 402 VAKPDISTLNTLINAYAQ 419
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L++ Y + G V++ M GV+P+ ++YN L+D GRA + +Y
Sbjct: 266 DVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVY 325
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M + G P ++ LL +Y +A + + RE++ G++ ++N+LL+ +
Sbjct: 326 DSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNS 385
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DE + E M SS +PD T +++I + G + +AE +FN + G P++
Sbjct: 386 GRIDEMESLLESMVSSV-AKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMS 444
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
TSL+ Y + + V ++ + G PD L+ ++P E++ ++ + +E+
Sbjct: 445 WTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLSS-CRSP-EQVKEVTDMIER 502
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 11/251 (4%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI---------TYNNLLDTMGRAKRPW 160
+F+ L+ Y + ++ EMK P + TYN L+ +G++ R
Sbjct: 120 SFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLS 179
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q + +++M G+ P NT+ ++ YG+A Y + ++R M++ ++ Y L+
Sbjct: 180 QAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALM 239
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
A G A EIF +++S PD +T+++++ S + A+ +F M+EAG
Sbjct: 240 NAHAREGNCVRAEEIFAELQSV-GFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGV 298
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGK 339
P+ LI +G+A T D + + E G P + LL+ + K E +
Sbjct: 299 RPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAER 358
Query: 340 LVECVEKSNSK 350
LV +E S K
Sbjct: 359 LVREIENSGVK 369
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 99/227 (43%), Gaps = 53/227 (23%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQ------------------------------------VK 163
KP++ +N L+D G++K+ W+ +
Sbjct: 80 KPDVGCFNMLIDAYGKSKQ-WREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAE 138
Query: 164 TIYKEMTDNGLSPN------------WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
++ EM ++ SP +NTY +L GR EDT +R+M+++G+
Sbjct: 139 KLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDT---FRDMQKQGILP 195
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+V + ++ + Y+D+A ++F M+ + C P+ +T+++++ + G AE +
Sbjct: 196 AVNTFTIMINIYGKAYYSDKADDLFRSMRKAL-CPPNLYTYTALMNAHAREGNCVRAEEI 254
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F E+ GF P+++ +L++ Y + + + E G+ PD
Sbjct: 255 FAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPD 301
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTR-ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
KS++ + +A K+ E R N + D F++L+ YG +G D ++ E
Sbjct: 338 KSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLES 397
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M + KP++ T N L++ + + + ++ + GL+P+ ++ SL+ AY + +
Sbjct: 398 MVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKL 457
Query: 194 GEDTLSVYREMKEKG 208
+S++++M + G
Sbjct: 458 FRKCVSIFQKMVKAG 472
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 165/372 (44%), Gaps = 18/372 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+++G G F + ++ +M V+PNM TY L+ G+ K I
Sbjct: 387 DVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKIL 446
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M + G+ P+ Y ++ AYG+A E+ L ++ M E G + +V YN+L+ M A
Sbjct: 447 LHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARG 506
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E+ I M S D +F+ +I G+ EA + E+ +A F+P+
Sbjct: 507 GLYKESEAIMWKMGES-GVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERT 565
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPK--EELGKLVEC 343
+++ Y A D+ + GI P C C++ V ++ + + L E
Sbjct: 566 FEAVLSVYCTAGLVDESEEQFREIRASGILP-SVMCYCMMIAVYARSNRWDDAYEVLDEM 624
Query: 344 VEKSNSKLGYVVKLLLEE--------QDIEGDFKKEATELFNSISKDVKKAYCNCLIDLC 395
V S + VV +++ Q +E F K NS + + N L++
Sbjct: 625 VTNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDK-----LNSEGCGLGMRFYNTLLEAL 679
Query: 396 VNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKAL 455
L E A ++L + ++ ++ +S WS+ + + G A TA+ +W+N++ +
Sbjct: 680 WWLGQKERAARVLSEAIKRGLFPELFRKSKLVWSVDVHRMWEGGACTAISVWLNNMHEMF 739
Query: 456 ESGEEFPPLLGI 467
GE+ P + +
Sbjct: 740 LKGEDLPHVASV 751
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 117/230 (50%), Gaps = 4/230 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNN 148
E S + R +K ++ P+ ++T+I G N++G L+++ EM+ G++P++ITYN
Sbjct: 194 EVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNT 253
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
LL+ + + +++ M + G+ P+ TY +L+ +G+ E + +EM+ G
Sbjct: 254 LLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSG 313
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ YN LL A G A +F M+ + C P++ T+S ++ + G+ +
Sbjct: 314 NLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEAR-CVPNAVTYSMLLNLYGGHGRYDDV 372
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F EM + EP++ LI+ +G+ +VV + + E + P+
Sbjct: 373 RELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPN 422
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K ++ N F+ + K + G++ L +++ M + I KPN Y ++ +GR +
Sbjct: 101 KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEK 160
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
I++EM +G+ + +Y +L+ +YGR E +L + MK++ + S+ YNT++
Sbjct: 161 STEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVIN 220
Query: 222 MCADVGYTDEA-FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
CA G E +F +M+ E QPD T+++++ C+ RG EAE +F M E G
Sbjct: 221 SCARGGLNWEGLLSLFAEMR-HEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGM 279
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ +L++ +GK + + V L + G PD
Sbjct: 280 VPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPD 317
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++ L++ Y + G+ + V+ +M+ PN +TY+ LL+ G R V+ ++
Sbjct: 317 DISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELF 376
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + P+ TY L+ +G Y ++ ++++ +M E+ ++ ++ Y L+ C
Sbjct: 377 LEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKG 436
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +I M + P + ++ +I EA MFN M E G +P +
Sbjct: 437 GLHEDAKKILLHM-DEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVET 495
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCL 325
SLI + + + + ++ E G+ D D F G +
Sbjct: 496 YNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVI 535
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++E ++ ++ L+ ++G AG F L+V EM+ P+ +TYN ++ RA
Sbjct: 320 KSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFH 379
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + M G+ PN TY +++ AYGR + L ++ +M E G +V YN +
Sbjct: 380 EEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAV 439
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L M ++E +I MK + C P+ T+++M+ +C +G +F EM G
Sbjct: 440 LGMLGKKSLSEEMMKILGHMKLN-GCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCG 498
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
FEP+ +LI YG+ +D + + + G +P LLN + +
Sbjct: 499 FEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALAR 550
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 118/242 (48%), Gaps = 3/242 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW- 160
+ + +D A++T++ Y G + + ++E M G+ P+++TYN +LD G+ R W
Sbjct: 216 DDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWD 275
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + EM GL + T +++L A GR ++ + +K +G + YN LL
Sbjct: 276 KILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALL 335
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G EA + +M+ + NC PD+ T++ ++ G E + + M G
Sbjct: 336 HVFGKAGIFSEALSVLSEMEEN-NCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGI 394
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEELGK 339
PN T++I YG+ D + +++ ELG P+ +L ++ ++ EE+ K
Sbjct: 395 MPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMK 454
Query: 340 LV 341
++
Sbjct: 455 IL 456
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PNA ++T+I YG G+ D L ++++M +G PN+ TYN +L +G+ ++
Sbjct: 394 IMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMM 453
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I M NG SPN T+ ++L G+ + V+REMK G + +NTL++
Sbjct: 454 KILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAY 513
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++A ++ E+M + P T+++++ + RG AE++ +M GF P+
Sbjct: 514 GRCGSNNDAAKMHEEMIKA-GFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPS 572
Query: 284 LFVLTSLIQCYGKA 297
+ ++ Y K
Sbjct: 573 ETSYSLMVHSYAKG 586
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 7/215 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T++ + G G V+ EMK G +P+ T+N L+ GR +
Sbjct: 466 PNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKM 525
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G SP NTY +LL A R + SV +M+ KG + S T Y+ ++ A
Sbjct: 526 HEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAK 585
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS--CRGKVSEAEAMFNEMLEAGFEPN 283
G + E+ E + P SW + + + CR ++ E F + + G++P+
Sbjct: 586 GGNV-KGIEMIEKSIYDGDIFP-SWMLLRTLVLANFKCR-SLTGMERAFQALQKHGYKPD 642
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L + S++ + K D L + + G+ PD
Sbjct: 643 LVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPD 677
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 113 TLIKLYGTAGNFDGCLNVYE-EMKAIGVKPNMITYNN---LLDTMGRAKRPWQVKTIYKE 168
+L+K +GN++ L ++E + +G+ I + ++ +GR + ++
Sbjct: 153 SLLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDV 212
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ + + Y ++L AY R + ++ M E G+ S+ YN +L + +G
Sbjct: 213 IPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGR 272
Query: 229 T-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+ D+ E+ ++M+ S D +T S++++ C G + EA F+ + G++P
Sbjct: 273 SWDKILELLDEMR-SRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTY 331
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ +GKA + + L+ + E PD
Sbjct: 332 NALLHVFGKAGIFSEALSVLSEMEENNCPPD 362
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 88/196 (44%), Gaps = 5/196 (2%)
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
G ++ ++ G KP+++ N++L + + + + + D GL P+ T+ SL+
Sbjct: 626 GMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLM 685
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y R V R ++ G + + YNT++ G E I +M +S
Sbjct: 686 DMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEM-TSIGV 744
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
P +T+++ I+ + +G +E + + M+ PN + Y KA+R D+ +
Sbjct: 745 GPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAID 804
Query: 306 ALNRLPELGITPDDRF 321
++++ ++ DD F
Sbjct: 805 FVSKIKDV----DDTF 816
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
++++ ++ +D + + G++P+++T+N+L+D R W+ + + + +
Sbjct: 647 NSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQT 706
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
+G P+ +Y ++++ + R ++ + + EM G+ + YNT ++ A G E
Sbjct: 707 SGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTE 766
Query: 232 AFEIFEDMKSSENCQPDSWTF 252
++ M NC+P+ T+
Sbjct: 767 INDVISYM-IVHNCRPNELTY 786
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+IK + G + + EM +IGV P + TYN + ++ +
Sbjct: 712 DLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVI 771
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
M + PN TY + Y +AR ++ + ++K+
Sbjct: 772 SYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKD 811
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI +YG G ++ + V + ++ G+ P + TYN ++ + + + IY+ M
Sbjct: 268 YNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERML 327
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P TY +L+ AYG+ + L ++++M +G + +V Y++L++ C G +
Sbjct: 328 AAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWE 387
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+F +M +E C+P+ T++S+I C+ + +A+ MF +M G +P+ L
Sbjct: 388 LALELFREMH-TEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGL 446
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I Y +A + A ++ PD
Sbjct: 447 IAAYDRAGHWRRALTAFEQMKAHNCRPD 474
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I GT L + EM++ G++ N+ TY+ L++ + +Y++M
Sbjct: 198 YTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQML 257
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G +PN TY +L+ YG+ E+ + V ++ +G+ + YNT++ C G
Sbjct: 258 AEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQ 317
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA I+E M ++ QP + T++++I+ G++ A +F +M+ G E N+ +SL
Sbjct: 318 EALRIYERMLAA-GAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSL 376
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I KA R + + + G P+
Sbjct: 377 ISACEKAGRWELALELFREMHTEGCRPN 404
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 16/231 (6%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG----VKP--NMITYNNLLDTMGRAKRP 159
D A + L+K +G+ +++ ++ + + P N +TY ++ G ++
Sbjct: 152 FDSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQL 211
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM G+ N +TY++L+ + + L VYR+M +G ++ YNTL
Sbjct: 212 RRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTL 271
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G +EA + + ++ + P+ T++++I C+ G+ EA ++ ML AG
Sbjct: 272 IDVYGKTGAWEEAIRVLDALE-RQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAG 330
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+P T+LI YGK + D RAL I D GC NV+T
Sbjct: 331 AQPTATTYTALISAYGKNGQLD---RALQ------IFQDMVRRGCERNVIT 372
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI ++ ++++++MK G P+ +TYN LLD G+++RP + +
Sbjct: 263 DLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVL 322
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM NG SP TY SL+ AY + E+ L + +M KG++ V Y TLL+
Sbjct: 323 QEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKA 382
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A ++F +M++ C+P+ TF+++I + RGK +E +F+++ P++
Sbjct: 383 GKDDFAIQVFLEMRAV-GCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVT 441
Query: 287 LTSLIQCYGK 296
+L+ +G+
Sbjct: 442 WNTLLAVFGQ 451
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LIK++G G F + V++++K P+++T+N LL G+ QV I
Sbjct: 402 PNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGI 461
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM G +T+ +L+ AY R + ++VY+ M E G+ ++ YN +LA A
Sbjct: 462 FKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALAR 521
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +++ ++ +M+ C+P+ ++SS++ + ++ A E+ E +
Sbjct: 522 GGLWEQSEKVLAEMEDGR-CKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAV 580
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+L +L+ K+ + RA L GI+PD +L++
Sbjct: 581 LLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSI 623
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+TLI Y G+FD + VY+ M GV P++ TYN +L + R Q + + E
Sbjct: 475 DTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAE 534
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D PN +Y+SLL AY + E + E+ ++ L TL+ + +
Sbjct: 535 MEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDL 594
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
E F +++ PD T ++M++I + V++A + N M E F P+L
Sbjct: 595 LIETERAFLELR-RRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYN 653
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ Y +++ L + E G+ PD
Sbjct: 654 SLMYMYSRSENFQKSEEILREVLEKGMKPD 683
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 16/216 (7%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ E++ G+ P++ T N +L GR + + I M + +P+ TY SL+ Y R
Sbjct: 602 FLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSR 661
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ + + + RE+ EKGM+ YNT++ G EA IF +MK S PD
Sbjct: 662 SENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSA-LVPDVV 720
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+++ I + +EA + M++ G +P+ S++ Y K + +
Sbjct: 721 TYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEA------- 773
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+ F L N+ KEE +L+E + K
Sbjct: 774 --------NSFVKNLSNLDPHVSKEEESRLLERIAK 801
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 95/207 (45%), Gaps = 3/207 (1%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL---LDTMGRAKRPWQVKTIYKEMT 170
+IK G + D L V+ ++ N+ + + + + +G+A R ++ +
Sbjct: 126 IIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQ 185
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G+ + Y L+ AY + D ++++ +M++ G ++ YN +L + +G
Sbjct: 186 NDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPW 245
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ S PD +T++++I+ C EA +F +M GF P+ +L
Sbjct: 246 SNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNAL 305
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
+ +GK++R + ++ L + G +P
Sbjct: 306 LDVFGKSRRPQEAMKVLQEMEANGFSP 332
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++L+ +Y + NF + E+ G+KP+ I+YN ++ R R + I+ EM
Sbjct: 652 YNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMK 711
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
D+ L P+ TY + + Y + + V R M ++G + YN+++
Sbjct: 712 DSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIV 761
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I Y G ++ EMK + P+++TYN + T + +
Sbjct: 683 DRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVV 742
Query: 167 KEMTDNGLSPNWNTYASLLRAY 188
+ M G P+ NTY S++ Y
Sbjct: 743 RYMIKQGCKPDQNTYNSIVDWY 764
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +S L+ Y AG ++ + +EM+A GVKP+ ++ +L R + WQ +
Sbjct: 333 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGDWQKAFAV 391
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ + Y ++ +G+ + + +M+E+G++ V +NTL+
Sbjct: 392 LREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCK 451
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A E+FE+M+ S NC P + T++ MI + + EAM +EM E G PN+
Sbjct: 452 GGRHDRAAELFEEMRES-NCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNII 510
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R + + + + G+ P L+N Q
Sbjct: 511 TYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + ++ +I +G ++ + +M+ G++P+++T+N L+D + R +
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM ++ P TY ++ G + E ++ EMKE+G+ ++ Y TL+ +
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA + E MK ++ +P + +++ + RG A + M G E ++
Sbjct: 521 RSGRYKEAIDCIEAMK-ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSI 579
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
VL SLI +G+ +R + L + E G+ PD
Sbjct: 580 LVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPD 613
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R E D ++TLI + G D ++EEM+ P TYN +++ +G +
Sbjct: 429 KMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQE 488
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
V+ + EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 489 HWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYH 548
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G D A + + MK ++ + +S+I +V EA ++ M E
Sbjct: 549 ALVNAYAQRGLADHALNVVKAMK-ADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRE 607
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
G P++ T+L++ + ++ D V + G PD +
Sbjct: 608 NGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRK 650
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 2/224 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
NA + LI GTAG ++ E G +KP YN LL R + +
Sbjct: 264 NAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLD 323
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM+ G++P+ TY+ L+ AY RA E + +EM+ G++ S +++ +LA D G
Sbjct: 324 EMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRG 383
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+AF + +M++S +PD ++ MI + A FN+M E G EP++
Sbjct: 384 DWQKAFAVLREMQAS-GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTW 442
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+LI + K R D + E P ++N++ +
Sbjct: 443 NTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGE 486
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR---EMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ P+ +Y+ LL + R D + R +++E ++ L++ L++ A
Sbjct: 181 LREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFAR 240
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
D A E+ ++ P S +++I+ G+V+EAEA+F E AG +P
Sbjct: 241 AALPDAALELLASAQAI-GLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRT 299
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVEC 343
+L++ Y + + + L+ + + G+ PD+ L++ T+ + E + L++
Sbjct: 300 RAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 344 VEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISKDVK--KAYCNCLIDLCVNLNL 400
+E K YV +L GD++K L + V+ + + N +ID N
Sbjct: 360 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419
Query: 401 LENAC----KLLELGLTLEVYT 418
L +A K+ E G+ +V T
Sbjct: 420 LGHAMDAFNKMREEGIEPDVVT 441
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++LI +G +V + M+ G++P++ITY L+ + R ++ +V IY+EM
Sbjct: 582 LNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 641
Query: 171 DNGLSPNWNTYASL 184
+G +P+ A L
Sbjct: 642 TSGCAPDRKARAML 655
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +S L+ Y AG ++ + +EM+A GVKP+ ++ +L R + WQ +
Sbjct: 333 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGDWQKAFAV 391
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ + Y ++ +G+ + + +M+E+G++ V +NTL+
Sbjct: 392 LREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCK 451
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A E+FE+M+ S NC P + T++ MI + + EAM +EM E G PN+
Sbjct: 452 GGRHDRAAELFEEMRES-NCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNII 510
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R + + + + G+ P L+N Q
Sbjct: 511 TYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + ++ +I +G ++ + +M+ G++P+++T+N L+D + R +
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAE 460
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM ++ P TY ++ G + E ++ EMKE+G+ ++ Y TL+ +
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA + E MK ++ +P + +++ + RG A + M G E ++
Sbjct: 521 RSGRYKEAIDCIEAMK-ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSI 579
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
VL SLI +G+ +R + L + E G+ PD
Sbjct: 580 LVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPD 613
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R E D ++TLI + G D ++EEM+ P TYN +++ +G +
Sbjct: 429 KMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQE 488
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
V+ + EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 489 HWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYH 548
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G D A + + MK ++ + +S+I +V EA ++ M E
Sbjct: 549 ALVNAYAQRGLADHALNVVKAMK-ADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRE 607
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
G P++ T+L++ + ++ D V + G PD +
Sbjct: 608 NGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRK 650
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 2/224 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
NA + LI GTAG ++ E G +KP YN LL R + +
Sbjct: 264 NAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLD 323
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM+ G++P+ TY+ L+ AY RA E + +EM+ G++ S +++ +LA D G
Sbjct: 324 EMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRG 383
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+AF + +M++S +PD ++ MI + A FN+M E G EP++
Sbjct: 384 DWQKAFAVLREMQAS-GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTW 442
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+LI + K R D + E P ++N++ +
Sbjct: 443 NTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGE 486
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR---EMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ P+ +Y+ LL + R D + R +++E ++ L++ L++ A
Sbjct: 181 LREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFAR 240
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
D A E+ ++ P S +++I+ G+V+EAEA+F E AG +P
Sbjct: 241 AALPDAALELLASAQAI-GLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRT 299
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVEC 343
+L++ Y + + + L+ + + G+ PD+ L++ T+ + E + L++
Sbjct: 300 RAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 344 VEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISKDVK--KAYCNCLIDLCVNLNL 400
+E K YV +L GD++K L + V+ + + N +ID N
Sbjct: 360 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419
Query: 401 LENAC----KLLELGLTLEVYT 418
L +A K+ E G+ +V T
Sbjct: 420 LGHAMDAFNKMREEGIEPDVVT 441
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++LI +G +V + M+ G++P++ITY L+ + R ++ +V IY+EM
Sbjct: 582 LNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 641
Query: 171 DNGLSPNWNTYASL 184
+G +P+ A L
Sbjct: 642 TSGCAPDRKARAML 655
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 115/226 (50%), Gaps = 2/226 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
FS +++ Y A FD + + M+ GV N+ +N+LL + ++K + + I+ +M
Sbjct: 141 FSIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKM- 199
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+N SP+ TY+ LL +GRA VY +M G Q + Y ++ G +
Sbjct: 200 NNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVE 259
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + +DM SS CQP ++ +S ++ ++ +A A F +M + G P++ V +L
Sbjct: 260 EAVCVVQDM-SSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNAL 318
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ + K ++ D+ R ++ + GI+P+ R +LN + K++
Sbjct: 319 VTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDD 364
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N ++ D +S L++ +G A N VY +M A G +P+++TY ++D + + R
Sbjct: 200 NNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVE 259
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + ++M+ G P Y+ L+ YG ED ++ + +M++ G+ V +YN L+
Sbjct: 260 EAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALV 319
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
V D AF + +DM+ P+S T++ ++ GK EA +F M++
Sbjct: 320 TAFCKVKKFDNAFRVMDDME-GHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIK 375
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 36/215 (16%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G + +Y+ ++ ++ + ++ + + M G++ N T++ ++R Y RA+ ++
Sbjct: 99 GCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRKEGVA-NVETFSIIMRKYARAQKFDEA 157
Query: 198 LSVYREMKEKGMQLSVTLYNTLL-AMC--ADVGYTDEAF--------------------- 233
+ + M+ G+ ++ +N+LL A+C +V E F
Sbjct: 158 VYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGW 217
Query: 234 ----------EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
E++ DM ++ CQPD T+ M+ G+V EA + +M G +P
Sbjct: 218 GRAPNLPKMREVYSDMLAA-GCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPT 276
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F+ + L+ YG R +D V + + GI PD
Sbjct: 277 TFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPD 311
>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 808
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++WR P++ ++ LI +G AG + +N+ E+M + P+ TYNNL++ G +
Sbjct: 170 QEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNW 229
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L AY LS + MK ++ T N +
Sbjct: 230 REALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIV 289
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +G ++A +IF M+ C+PD TF+S+I + S G+V +A+F+ ML
Sbjct: 290 IYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAE 349
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G P + +LI Y +++ + ++ G+ PD
Sbjct: 350 GLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPD 389
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ LI Y G + L+V++++KA G+ P++++Y +LL + GR+K+P + + ++ M
Sbjct: 357 SYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMM 416
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA----- 224
L PN ++ +L+ AYG D + V REM++ G+ ++ TLLA C
Sbjct: 417 KKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQK 476
Query: 225 ------------------------------DVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+VG ++A ++ M+ + P+S T++
Sbjct: 477 VNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMK-VAPNSVTYTV 535
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I+ C K +A F +M+E V +S+I Y K + + + G
Sbjct: 536 LISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAG 595
Query: 315 ITPD 318
PD
Sbjct: 596 CCPD 599
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 108/231 (46%), Gaps = 5/231 (2%)
Query: 92 EKSYDT----RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
EK+ D R + + R D F+++I LY +G + C V+ M A G+ P +++YN
Sbjct: 300 EKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYN 359
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
L+ + +++K++ +GL P+ +Y SLL +YGR++ + ++ MK+
Sbjct: 360 ALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKA 419
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
++ +V +N L+ G +A ++ +M+ + P+ T +++ C G+
Sbjct: 420 KLKPNVVSFNALIDAYGSNGLLADAVKVLREME-QDGIHPNIVTICTLLAACGRCGQKVN 478
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A+ + G + N S I Y + V N + ++ + P+
Sbjct: 479 IDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPN 529
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 106 IDPNAFS--TLIKLYGTAG---NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
I PN + TL+ G G N D L+ K G+K N + N+ + +
Sbjct: 456 IHPNIVTICTLLAACGRCGQKVNIDAVLSA---AKMRGIKLNTVACNSAIGSYMNVGEYE 512
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGR-ARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +Y M ++PN TY L+ + ++YG+ + + +M E + L+ + +++
Sbjct: 513 KAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGK-AIEFFADMMELKIALTKEVCSSV 571
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G EA IF MK + C PD TF++M+ + +A + EM +
Sbjct: 572 ICAYSKQGQITEAESIFTMMKMA-GCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYD 630
Query: 280 FEPNLFVLTSLIQCYGK 296
+ + ++L++ + K
Sbjct: 631 IQLDTIACSALMRAFNK 647
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 36/206 (17%), Positives = 85/206 (41%), Gaps = 1/206 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
S++I Y G +++ MK G P++IT+ +L + + + +EM D
Sbjct: 569 SSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMED 628
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
+ + ++L+RA+ + L + MKEK + S ++ +++ C+ +
Sbjct: 629 YDIQLDTIACSALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDWRT 688
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
+ + M+ S + + ++ + GK+ +F ++ +G E N + ++
Sbjct: 689 ILNLMKLMEPSFSVVSIG-LLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIML 747
Query: 292 QCYGKAQRTDDVVRALNRLPELGITP 317
+ + L + + GI P
Sbjct: 748 KNLLAVGNWRKYIEVLEWMEDAGIQP 773
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/254 (18%), Positives = 100/254 (39%), Gaps = 42/254 (16%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL-------- 150
A+ +++ A ++ I Y G ++ + +Y M+ + V PN +TY L+
Sbjct: 486 AKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSK 545
Query: 151 ---------DTM------------------GRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
D M + + + ++I+ M G P+ T+ +
Sbjct: 546 YGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTA 605
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
+L AY + + +EM++ +QL + L+ G + + E MK E
Sbjct: 606 MLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMRAFNKRGNPSQVLILAEFMKEKE 665
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEM--LEAGFE-PNLFVLTSLIQCYGKAQRT 300
D+ F M++ CS + + + N M +E F ++ +L L+ G++ +
Sbjct: 666 IPFSDA-IFFEMVSACSL---LRDWRTILNLMKLMEPSFSVVSIGLLNQLLHVLGRSGKI 721
Query: 301 DDVVRALNRLPELG 314
+ +++ ++ G
Sbjct: 722 ESMMKLFYKITASG 735
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 179/379 (47%), Gaps = 18/379 (4%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+A ++ LI+++G G F + ++ +M ++P+M TY ++ G+ +
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I + MT N + P+ Y ++ A+G+A E+ L + M E G S+ Y++LL A
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFA 503
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G E+ I + S + TF++ I GK EA + +M ++ +P+
Sbjct: 504 RGGLVKESEAILSRLVDS-GIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL-LNVMTQTPK-EELGKLVE 342
L +++ Y A+ D+ + I P C C+ L V +T + +++ +L+E
Sbjct: 563 RTLEAVLSVYSFARLVDECREQFEEMKASDILPS-IMCYCMMLAVYGKTERWDDVNELLE 621
Query: 343 CVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT--------ELFNSISKDVKKAYCNCLIDL 394
E ++++ + +++ Q I+GD+ ++ + NS + + N L+D
Sbjct: 622 --EMLSNRVSNIHQVI--GQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDA 677
Query: 395 CVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA 454
L E A ++L ++ ++ ++ WS+ + +S G TAL +W+ND++
Sbjct: 678 LWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDMNDM 737
Query: 455 LESGEEFPPLLGINTGHGK 473
L +GE+ P L + + G+
Sbjct: 738 LLNGEDLPQLAVVVSVRGQ 756
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
R +N+K ++T+I G +++G L ++ EM+ G++P+++TYN LL
Sbjct: 201 RMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIR 260
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + +++ M D G+ P+ TY+ L+ +G+ R E + EM G +T Y
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSY 320
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N LL A G EA +F M+++ C P++ T+S ++ + G+ + +F EM
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +P+ LI+ +G+ +VV + + E I PD
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 13/301 (4%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K ++ N F+ + K + G++ L +++ M + I KPN Y ++ +GR +
Sbjct: 100 KNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDK 159
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ EM G+S + +Y +L+ AYGR E +L + MK + S+ YNT++
Sbjct: 160 CLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVIN 219
Query: 222 MCADVGYTDEA-FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
CA G E +F +M+ E QPD T++++++ C+ RG EAE +F M + G
Sbjct: 220 ACARGGLDWEGLLGLFAEMR-HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELG 338
P+L + L++ +GK +R + V L+ + G PD LL ++ KE +G
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 339 -----KLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
+ C +N+ Y V L L Q D ++ S + D A N LI+
Sbjct: 339 VFHQMQAAGCTPNANT---YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 394 L 394
+
Sbjct: 396 V 396
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+E + D ++TL+ G D V+ M G+ P++ TY++L++T G+ +R
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+V + EM G P+ +Y LL AY ++ ++ + V+ +M+ G + Y+ L
Sbjct: 299 EKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L + G D+ ++F +MKSS N PD+ T++ +I + G E +F++M+E
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSS-NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EP++ +I GK +D + L + I P +
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 107/214 (50%), Gaps = 2/214 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L++ Y +G+ + V+ +M+A G PN TY+ LL+ G++ R V+ ++
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + P+ TY L+ +G Y ++ ++++ +M E+ ++ + Y ++ C
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +I + M ++ + P S ++ +I EA FN M E G P++
Sbjct: 436 GLHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
SL+ + + + L+RL + GI P +R
Sbjct: 495 YHSLLYSFARGGLVKESEAILSRLVDSGI-PRNR 527
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + V++EMKA G +P+ +T+N+LLD G+A+R + +
Sbjct: 242 DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVI 301
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G P+ TY SL+ +Y + E +++ +EM+ KG++ V Y TL++
Sbjct: 302 QEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRA 361
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A +++M + C+P+ T++++I + RGK E A+F+E+ AGF P++
Sbjct: 362 GKIDAAIVEYDEMVRN-GCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVT 420
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ +G+ +V + + G P+
Sbjct: 421 WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPE 452
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 122/245 (49%), Gaps = 2/245 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ +YG A D + V +EM+ +G P+++TYN+L+ + + Q +
Sbjct: 277 DKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALK 336
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G+ P+ TY +L+ RA + + Y EM G + ++ YN L+ M
Sbjct: 337 QEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVR 396
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E +F++++S+ PD T+++++ + G SE +F EM +AG+ P
Sbjct: 397 GKFPEMMAVFDELRSA-GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
SLI Y + D ++ R+ E GI PD +L+ + + + E+ KL +E
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515
Query: 346 KSNSK 350
+ + K
Sbjct: 516 ERDCK 520
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 116/210 (55%), Gaps = 8/210 (3%)
Query: 86 RASKLKEK--SYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
RA K+ YD RN PN ++ LIK++G G F + V++E+++ G P
Sbjct: 360 RAGKIDAAIVEYDEMVRNG---CKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVP 416
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++T+N LL G+ +V ++KEM G P +TY SL+ +Y R + + +Y
Sbjct: 417 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIY 476
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+ M E G+ V+ YN +L+ A G ++A ++F +M+ +C+PD +++SS++ +
Sbjct: 477 KRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME-ERDCKPDEYSYSSLLHAYAN 535
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
++ + +A+ +++ EP+ +++ +L+
Sbjct: 536 AKRLDKMKALSDDIYSERIEPHNWLVKTLV 565
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 4/221 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK GV P+ TYN L+ R + ++ EM +G P+ T+ SLL YG+AR
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ + V +EM+ G SV YN+L++ G ++A + ++M+ + +PD T++
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEME-VKGIKPDVVTYT 352
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I+ GK+ A ++EM+ G +PNL +LI+ +G + +++ + L
Sbjct: 353 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSA 412
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
G PD LL V Q L V V K K GY+
Sbjct: 413 GFVPDIVTWNTLLAVFGQN---GLDSEVSGVFKEMKKAGYI 450
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTI 165
D A++ L+ + AG F + V+ M GV+P ++TYN +L + PW +V +
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVEL 230
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M ++G++P+ TY +L+ R ++ V+ EMK G + +N+LL +
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA E+ ++M+ C P T++S+I+ G + +A A+ EM G +P++
Sbjct: 291 ARRHDEAIEVIQEMERV-GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVV 349
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+LI +A + D + + + G P+
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPN 382
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 5/215 (2%)
Query: 90 LKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L E++ + E I P+ ++TLI AG D + Y+EM G KPN+ TYN
Sbjct: 328 LLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYN 387
Query: 148 NLLDTMG-RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
L+ G R K P ++ ++ E+ G P+ T+ +LL +G+ + V++EMK+
Sbjct: 388 ALIKMHGVRGKFP-EMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKK 446
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G Y +L++ + G D A +I++ M + PD T++++++ + G+
Sbjct: 447 AGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEA-GIYPDVSTYNAVLSALARGGRWE 505
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+AE +F EM E +P+ + +SL+ Y A+R D
Sbjct: 506 QAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLD 540
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
E+ GV + + M RA R + + D P+ Y +L+ A+ RA
Sbjct: 131 ELHGEGVLHHPRVLATAIRVMARAGRLAEASA----LLDAAPGPDAGAYTALVSAFSRAG 186
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT-DEAFEIFEDMKSSENCQPDSWT 251
D ++V+R M + G+Q ++ YN +L + + + E E+ MK PD +T
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMK-EHGVAPDRYT 245
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I+ C R EA +F+EM +GFEP+ SL+ YGKA+R D+ + + +
Sbjct: 246 YNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEME 305
Query: 312 ELGITP 317
+G P
Sbjct: 306 RVGCPP 311
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR-------- 158
D + ++ ++ G ++ ++ EM+ KP+ +Y++LL AKR
Sbjct: 487 DVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALS 546
Query: 159 -----------PWQVKTI----------------YKEMTDNGLSPNWNTYASLLRAYGRA 191
W VKT+ + E+ S + N +++ YG+
Sbjct: 547 DDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKN 606
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
R + MKE + LS YN+L+ M + +G ++ I ++KSS +PD ++
Sbjct: 607 RMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS-GVRPDRYS 665
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I +G++ EA +F+EM +G +P++ ++ Y ++ + + +
Sbjct: 666 YNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMV 725
Query: 312 ELGITPDDR 320
G P++R
Sbjct: 726 TQGCKPNER 734
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 9/217 (4%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
K+ + VN K ++ EK++ R ++ +D N + ++ +YG + M
Sbjct: 562 KTLVLVNSKVNNLAE-AEKAF-LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLM 619
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K + + TYN+L+ R + + I E+ +G+ P+ +Y +++ AYGR
Sbjct: 620 KESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQM 679
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ ++ EMK G++ V YN + +EA E+ M ++ C+P+ T++S
Sbjct: 680 KEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYM-VTQGCKPNERTYNS 738
Query: 255 MITICSCRGKVSEAEAMFNEM--LEAGF----EPNLF 285
++ GK+++A+ + + L G+ + NLF
Sbjct: 739 IVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLF 775
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 9/239 (3%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEM 134
+ + N K R K+K S D + RI+P+ TL+ + N + E+
Sbjct: 531 HAYANAK--RLDKMKALSDDIYSE----RIEPHNWLVKTLVLVNSKVNNLAEAEKAFLEL 584
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+ ++ N ++ G+ + +V+ I M ++ ++ + TY SL+ Y R
Sbjct: 585 RQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDC 644
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
E ++ E+K G++ YNT++ G EA +F +MK S +PD T++
Sbjct: 645 EKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS-GLKPDVVTYNI 703
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ EA + M+ G +PN S+++ Y + + D ++ LP+L
Sbjct: 704 FVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 762
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 186/418 (44%), Gaps = 19/418 (4%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D + +++++K+Y +F +Y+ +K G++P+ TYN L+ R RP +
Sbjct: 951 FKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGL 1010
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM GL P +TY SL+ ++G+ + E ++ E++ G +L + Y+ ++ +
Sbjct: 1011 VLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIY 1070
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +A +F MK E +P T ++ G+ EAE + + + E +
Sbjct: 1071 RNSGSHSKAQRLFSMMK-DEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLS 1129
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV--MTQTPKEELGKLV 341
+S+I Y + + ++ L ++ E G+ PD R C + ++Q E + L+
Sbjct: 1130 TLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAI-LLL 1188
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLL 401
+ + L ++LL E+ + E+ ++ + + N L DL L
Sbjct: 1189 NALRDTGFDLP--IRLLTEKPEPLVSALDLCLEMLETLGDNAAFNFVNALEDLLWAFELR 1246
Query: 402 ENACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEE 460
A + L + ++Y D+ + W + LS GAAL A +L+ E
Sbjct: 1247 ATASWVFLLAIKRKIYRHDVFRVADKDWGADFRKLSGGAALDA----------SLQGCPE 1296
Query: 461 FPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
P + + TG +Y+ L S ++ L E+ +PF + G + + K WL+
Sbjct: 1297 SPKSVALITGTA--EYNMVSLDSTLKACLWEMGSPFLPCKTRSGLLIAKAHSLKMWLK 1352
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T R R D ++TLI A N + +NV+++M A +P++ TYN ++ GR
Sbjct: 317 TEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRC 376
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + ++ ++ G P+ +Y S L A+ R E + EM + G Y
Sbjct: 377 GLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTY 436
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NT++ M G D A +++ DMKSS PD T++ +I K+ EA M +EML
Sbjct: 437 NTMIHMYGKQGQNDLALQLYRDMKSSGR-NPDVITYTVLIDSLGKTNKIEEAAGMMSEML 495
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
G +P L ++LI Y KA + + + + G PD +L++
Sbjct: 496 NTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDI 547
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++ + + GN + ++ EEM IG + +TYN ++ G+ + +Y
Sbjct: 397 DAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLY 456
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M +G +P+ TY L+ + G+ E+ + EM G++ ++ Y+ L+ A
Sbjct: 457 RDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKA 516
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA E F+ M S +PD +S M+ I + A + EM+ G P +
Sbjct: 517 GKPVEAEETFDCMLRS-GTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSL 575
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPEL-GITP 317
+++ G A + +D+ R + + E+ G+ P
Sbjct: 576 YELMLRTLGNANKVEDIGRVVRDMEEVCGMNP 607
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 1/220 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
++ + L++ G + V +E++ IG K + + +LD RA ++VK IY
Sbjct: 851 DSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHG 910
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G P+ + Y + + R + D ++ EM+E G + ++++N++L M +
Sbjct: 911 MKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDD 970
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ +I++ +K + +PD T++ +I + + E + +EM G EP L
Sbjct: 971 FRKTTQIYQRIK-EDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYK 1029
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
SL+ +GK Q + L G D F ++ +
Sbjct: 1030 SLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKI 1069
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 116/277 (41%), Gaps = 43/277 (15%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRA-KR 158
+ K ++ P F ++K G ++ VYE + PN + +L +G+A +
Sbjct: 180 DRKVQMTPTDFCFVVKSVGQE-SWHRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQE 238
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA--------------------------- 191
P V+ + + + Y +++ Y R+
Sbjct: 239 PLAVEVFTR--AEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNT 296
Query: 192 ------RYGEDT----LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ GE T + + E++ G++ + YNTL++ C+ +EA +F+DM
Sbjct: 297 LINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDM-V 355
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ +C+PD WT+++MI++ G +AE +FN++ GF P+ S + + + +
Sbjct: 356 AHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVE 415
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
V + ++G D+ ++++ + + +L
Sbjct: 416 KVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLA 452
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 86/208 (41%), Gaps = 2/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK-EM 169
F LI+ F V+ +M+ G+K + Y +++ + P +
Sbjct: 712 FEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTE 771
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
TD + N + Y ++ AYGR + + SV M++ + ++ ++N L+ A G
Sbjct: 772 TDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCY 831
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ A +F M + P + + ++ G++ E + E+ + GF+ + +
Sbjct: 832 ERARAVFNTMM-KDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILL 890
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITP 317
++ + +A +V + + + G P
Sbjct: 891 MLDAFARAGNIFEVKKIYHGMKAAGYFP 918
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +S L+ Y AG ++ + +EM+A GVKP+ ++ +L R + WQ +
Sbjct: 340 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGDWQKAFAV 398
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ + Y ++ +G+ + + M+E+G++ V +NTL+
Sbjct: 399 LREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRK 458
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A E+FE+M+ S NC P + T++ MI + + + E M +EM E G PN+
Sbjct: 459 GGRHDRAMELFEEMRES-NCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNII 517
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R + + + + G+ P L+N Q
Sbjct: 518 TYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQ 563
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R E D ++TLI + G D + ++EEM+ P TYN +++ +G +
Sbjct: 436 RMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQE 495
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R V+T+ EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 496 RWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYH 555
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G D A + + M+ ++ + + +S++ +V EA ++ M E
Sbjct: 556 ALVNAYAQRGLADHALNVVKAMR-ADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKE 614
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
P++ T+L++ + ++ D V + G PD +
Sbjct: 615 NDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDRK 657
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDP--NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMI 144
+ L + + D A + + P NA + LI G AG ++ E G +KP
Sbjct: 248 AALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTR 307
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
YN LL + + + EM+D G++P+ TY+ L+ AY RA E + +EM
Sbjct: 308 AYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 367
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ G++ S +++ +LA D G +AF + +M +S QPD ++ MI
Sbjct: 368 EADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS-GVQPDRHFYNVMIDTFGKYNC 426
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ A FN M E G EP++ +LI + K R D + + E P
Sbjct: 427 LGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNI 486
Query: 325 LLNVMTQ 331
++N++ +
Sbjct: 487 MINLLGE 493
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++ +I +G ++ + M+ G++P+++T+N L+D + R + ++
Sbjct: 410 DRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELF 469
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM ++ P TY ++ G ++ EMKE+G+ ++ Y TL+ +
Sbjct: 470 EEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRS 529
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA E E MK ++ +P + +++ + RG A + M G E + V
Sbjct: 530 GRFKEAIECIEVMK-ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVV 588
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L SL+ +G+ +R + L + E + PD
Sbjct: 589 LNSLMNAFGEDRRVVEAFSVLQFMKENDLRPD 620
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 119/262 (45%), Gaps = 13/262 (4%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR---EMKEKGMQLSVTLYNTLLAMCAD 225
+ ++G P+ +Y+ LL + R D + R +++E ++ L++ L++ A
Sbjct: 188 IREHGFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFAR 247
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
D A ++ ++ P S +++I+ G+V+EAEA+F E AG +P
Sbjct: 248 AALPDAALDLLASAQAI-GLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRT 306
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVEC 343
+L++ Y K + + L+ + + G+ PD+ L++ T+ + E + L++
Sbjct: 307 RAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKE 366
Query: 344 VEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISKDVK--KAYCNCLIDLCVNLNL 400
+E K YV +L GD++K L + V+ + + N +ID N
Sbjct: 367 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNC 426
Query: 401 LENAC----KLLELGLTLEVYT 418
L +A ++ E G+ +V T
Sbjct: 427 LGHAMDAFNRMREEGIEPDVVT 448
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 117/237 (49%), Gaps = 1/237 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R R D ++TLI + N + + V+E+M A +P++ TYN ++ GR +
Sbjct: 285 RQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKA 344
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +++E+ + G P+ TY SLL A+ + + ++ + G + + YNT+
Sbjct: 345 EEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTM 404
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ M +G D A ++++M++ C PD+ T++ MI +++EA + +M +AG
Sbjct: 405 IHMYGKMGRLDLAVGLYDEMRAM-GCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAG 463
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+P L ++LI Y K R D + + G+ PD +L+V ++ E
Sbjct: 464 LKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTE 520
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 156/368 (42%), Gaps = 15/368 (4%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D + L+ +Y AGNFD VY + G++P+ TYN L+ R+ RP +
Sbjct: 916 FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGF 975
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T+ EM GL+P +Y SLL A +A E ++ EM+ K QL+ ++Y+ ++ +
Sbjct: 976 TLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIY 1035
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +A + MK + +P T ++T G+ EAE + N + + E +
Sbjct: 1036 RNAGNHSKAENLLAVMK-EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVS 1094
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+++ Y K + L + G+ PD + C + + + L
Sbjct: 1095 TLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAIL--- 1151
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATEL--FNSISKDVKKAYCNCLIDLCVNLNLL 401
+ KS G+ + + L + + A L ++ + N + DL
Sbjct: 1152 LLKSLQDCGFDLPIRLLTERTPSLLSEIANYLEELEALEDSAALNFVNAVEDLLWAFECR 1211
Query: 402 ENACKLLELGLTLEVYTDIQSR-SPTQWSLHLKSLSLGAALTALHIWIND--------LS 452
A ++ +L + +Y D R + W + LS GAAL L +W++ L
Sbjct: 1212 ATASRIFQLAVERSIYRDNVFRVAQKDWGADFRKLSAGAALVGLTLWLDHMQPLKIARLP 1271
Query: 453 KALESGEE 460
K E GEE
Sbjct: 1272 KCGELGEE 1279
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 117/235 (49%), Gaps = 6/235 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I +YG G D + +Y+EM+A+G P+ +TY ++D++G+ R + + ++MT
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT 460
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D GL P +++L+ AY + D + + M G++ Y +L + A G T+
Sbjct: 461 DAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTE 520
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ ++ M ++N +PD + ++ + K E E + +M E NL +++++
Sbjct: 521 KMLCLYRKMM-NDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDM-ELLCRMNLGIISTM 578
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLVECV 344
+ KA+ + L + G PD + ++N T K E G L+EC+
Sbjct: 579 LI---KARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECI 630
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R P+ + +++ G + ++ L+ +E + A P +L +GRA++ +
Sbjct: 152 RASPDEVAFVVRAVGES-SWRRALDAFEWL-ARSSAPASRAVAVVLGVLGRARQDSIAEE 209
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGR------ARYGEDT--------------------- 197
++ G + + +++ Y R AR DT
Sbjct: 210 VFLRFAGEGATVQ--VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARS 267
Query: 198 ----------LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
L + E+++ G++ V YNTL++ C+ ++A +FEDM +SE C+P
Sbjct: 268 KSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASE-CRP 326
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D WT+++M+++ GK EAE +F E++E GF P+ SL+ + K D V
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTC 386
Query: 308 NRLPELGITPDD 319
+L + G ++
Sbjct: 387 EQLVKAGFKKNE 398
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+N L+ + + + ++ M G P ++ ++RA ++ V E++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+ ++S + LL A G E +I+ MK++ P+ + SMI++ +
Sbjct: 843 DMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAA-GYLPNMHLYRSMISLLCHHNRF 901
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+ E M EM AGF+P+L +L +L+ Y A D + + E G+ PD+ L
Sbjct: 902 RDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTL 961
Query: 326 LNVMTQT--PKE------ELGK--LVECVEKSNSKLGYVVKLLLEEQ--DIEGDFKKEAT 373
+ + ++ P+E E+GK L ++ S L K L EQ I + + ++
Sbjct: 962 IVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSY 1021
Query: 374 ELFNSISKDVKKAYCN 389
+L SI + K Y N
Sbjct: 1022 QLNRSIYHMMMKIYRN 1037
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G D V EE++ + K + T LLD +A ++V IY M G PN + Y
Sbjct: 829 GRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 888
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
S++ D + EM+ G + + + N LL M G D +++ +
Sbjct: 889 RSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILE 948
Query: 242 SENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+ +PD T++++I + CR + E + NEM + G P L SL+ KA+
Sbjct: 949 A-GLEPDEDTYNTLI-VMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAE 1004
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 68 GKTGSSPK--SYIWVNPKSPRASKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGN 123
GK G +PK SY + S +A +L+E++ R++ ++++ + + ++K+Y AGN
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKA-ELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGN 1040
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
N+ MK G++P + T + L+ + G A +P + + + + + L + Y++
Sbjct: 1041 HSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYST 1100
Query: 184 LLRAYGR-ARYGEDTLSVYREMKEKGMQ 210
+ AY + Y T + EMK G++
Sbjct: 1101 VFDAYLKNGDYNHGTTKLL-EMKRDGVE 1127
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 5/214 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D +F++ I +G + L + +EM A +KP+ I+YN+ ++ G+ + W++ +
Sbjct: 389 DATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQ-WEMALEL 447
Query: 166 YKEMTDNGLSPNWNTYASLLRAYG-RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++M GL+PN + +RA G R R+ ++ L + R+M +G+ +V YN+ + C
Sbjct: 448 RRQMPTKGLTPNVISSNIAIRACGERGRW-QEGLELLRQMPAQGLTPNVITYNSAIKTCG 506
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++A ++ MK PDS T++S I CS RG+ EA A+ EM G P++
Sbjct: 507 KGGQWEKALDLLAKMKELA-MTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDV 565
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+ I YGK + + V L ++P G+TP+
Sbjct: 566 ISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPN 599
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F ++ I+ G+ ++ +++ EM V P+ I+YN+ + GR + +V
Sbjct: 176 VSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVI 235
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM GL+P+ TY S++ G+ ++ LSV EM KG+ YN + C
Sbjct: 236 GLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRAC 295
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA E+ M+ S+ PD ++ + I C G+ + + +EM G PN
Sbjct: 296 GRSGRWKEAVEVLRQME-SQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPN 354
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S I GK + + V L + LG+TPD
Sbjct: 355 TIHFNSAIVACGKGGQWEKAVELLREVTALGLTPD 389
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ IK G G ++ L++ +MK + + P+ ITYN+ + + R +
Sbjct: 491 LTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAV 550
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM GL+P+ +Y + + AYG+ E + + R+M KG+ +V YN+++ C
Sbjct: 551 ALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKAC 610
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++A ++ +++K + PD +++ I+ C RG+ EA + EM G P+
Sbjct: 611 GRGGEWEKALDLLKELKETA-VAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPD 669
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ TS I+ + + LN + G++P
Sbjct: 670 VISYTSAIRACNAEGEWEKALGLLNLMGAHGVSP 703
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++ IK G G ++ + + EM ++G+ P+ ITYN+++ G+ + + ++
Sbjct: 214 DEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVL 273
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM+ GL+P +Y +RA GR+ ++ + V R+M+ +G+ V Y+ + C
Sbjct: 274 TEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGG 333
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + + ++ ++M + P++ F+S I C G+ +A + E+ G P+
Sbjct: 334 GQWETSVDLLDEM-AGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATS 392
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S I K+ R + + L +P + PD
Sbjct: 393 FNSAIAACTKSGRWKEALELLKEMPAKRLKPD 424
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ IK G G ++ +++ +EM GV PN I +N+ + G+ + + +
Sbjct: 319 DVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELL 378
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+E+T GL+P+ ++ S + A ++ ++ L + +EM K ++ YN+ + C
Sbjct: 379 REVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKG 438
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A E+ M ++ P+ + + I C RG+ E + +M G PN+
Sbjct: 439 GQWEMALELRRQM-PTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVIT 497
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S I+ GK + + + L ++ EL +TPD
Sbjct: 498 YNSAIKTCGKGGQWEKALDLLAKMKELAMTPD 529
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 106 IDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN S+ I+ G G + L + +M A G+ PN+ITYN+ + T G+ + +
Sbjct: 456 LTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKAL 515
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +M + ++P+ TY S + A + ++ +++ REM +G+ V Y +
Sbjct: 516 DLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAY 575
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + A E+ M + + P+ T++S+I C G+ +A + E+ E P+
Sbjct: 576 GKNGQWERAVELLRQMPT-KGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPD 634
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L I GK R ++ + L +P G+TPD
Sbjct: 635 LMSYNLAISACGKRGRWEEALDLLREMPAEGLTPD 669
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++++IK G G ++ L++ +E+K V P++++YN + G+ R +
Sbjct: 596 LTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEAL 655
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM GL+P+ +Y S +RA E L + M G+ + T Y+ + C
Sbjct: 656 DLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEAC 715
Query: 224 ADVGYTDEAFEIFEDM 239
G +EA + +M
Sbjct: 716 GKGGRREEAVCLVREM 731
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ L + EMKE G+ + + Y T + C G ++A E+ ++ E P+ + ++S
Sbjct: 128 EALGILDEMKEGGVVCAHS-YTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSA 186
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I C + A ++ EM + P+ S I+ G+ + + V+ L +P +G+
Sbjct: 187 IEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGL 246
Query: 316 TPD 318
TPD
Sbjct: 247 TPD 249
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +++ I G G ++ L++ EM A G+ P++I+Y + + A+ W+ +
Sbjct: 634 DLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRAC-NAEGEWEKALGL 692
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
M +G+SP +Y+ + A G+ E+ + + REM ++G+
Sbjct: 693 LNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGL 736
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 181 YASLLRAYGRA------RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
++S +R + R+ + GE T V + + + L A G EA
Sbjct: 72 HSSPMRRHARSCCRAAPKLGEATAVVTMQGAARANSRAARKLQAALREAATTGKWREALG 131
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA-GFEPNLFVLTSLIQC 293
I ++MK E + ++++ IT C +G+ +A + E+ E G PN+F S I+
Sbjct: 132 ILDEMK--EGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEA 189
Query: 294 YGKAQRTDDVVRALNRLPELGITPDD 319
G + + V L + + + PD+
Sbjct: 190 CGSGDQWEIAVSLLREMADREVVPDE 215
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 5/237 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ L++ Y AG V EM+ GV PN TY+ L+D G A R + + KEM
Sbjct: 342 AYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEM 401
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + PN ++ +L +Y + + V REM+ G++ YN ++
Sbjct: 402 EASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCL 461
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A F+ M SE +PD+ T++++I C CR GK AE +F EM+E G+ P
Sbjct: 462 DHAMATFDRML-SEGIEPDTVTWNTLID-CHCRAGKHDRAEELFEEMMEGGYSPCNTTFN 519
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+I +G +R DDV L + G+ P+ L+++ ++ + +EC++
Sbjct: 520 IMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGR--FNDAIECLD 574
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 116/234 (49%), Gaps = 1/234 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N R D ++ +I +G D + ++ M + G++P+ +T+N L+D RA +
Sbjct: 438 NSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHD 497
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +++EM + G SP T+ ++ ++G +D ++ M+ +G+ + Y TL+
Sbjct: 498 RAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLI 557
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G ++A E +DMK++ +P S ++++I + RG +A + F M G
Sbjct: 558 DIYGKSGRFNDAIECLDDMKAA-GLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGL 616
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+P+L L SLI +G+ +R + L + E + PD L+ + + K
Sbjct: 617 KPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEK 670
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E D ++TLI + AG D ++EEM G P T+N ++++ G +
Sbjct: 470 RMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQE 529
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R VK + M GL PN TY +L+ YG++ D + +MK G++ S T+YN
Sbjct: 530 RWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYN 589
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G +++A F M+ + +P +S+I + +EA + M E
Sbjct: 590 ALINAYAQRGLSEQAVSAFRAMR-VDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKE 648
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL---LNVMTQT 332
+P++ T+L++ + ++ D V + G TPD + L L M QT
Sbjct: 649 NDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALKYMKQT 706
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K +D + +I + AG+ L ++ G+ T ++ +G R +
Sbjct: 264 DKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVE 323
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ I++EM DNGL P Y +LLR Y +A +D V EM+ G+ + Y+ L+
Sbjct: 324 AEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLID 383
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ G + A + ++M++S N QP+++ FS +++ +G+ ++ + EM +G
Sbjct: 384 AYGNAGRWESARIVLKEMEAS-NVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVR 442
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+ +I +GK D + +R+ GI PD
Sbjct: 443 PDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPD 479
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 3/236 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PNA FS ++ Y G + V EM+ GV+P+ + YN ++DT G+
Sbjct: 402 EASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCL 461
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ M G+ P+ T+ +L+ + RA + ++ EM E G T +N +
Sbjct: 462 DHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIM 521
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ D D+ + M+S + P+S T++++I I G+ ++A ++M AG
Sbjct: 522 INSFGDQERWDDVKNLLAHMRS-QGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAG 580
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
+P+ + +LI Y + ++ V A + G+ P L+N + ++
Sbjct: 581 LKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRD 636
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 122/267 (45%), Gaps = 7/267 (2%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL--SVY 201
+TYN L+ R + + M +G ++ Y+ ++R+ R + + +Y
Sbjct: 199 LTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLY 258
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
RE++ ++L V L N ++ A G +A E ++ S + + + + +C
Sbjct: 259 REIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNC 318
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ EAEA+F EM + G +P +L++ Y KA D ++ + G++P+++
Sbjct: 319 -GRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQT 377
Query: 322 CGCLLNVMTQTPKEELGKLV-ECVEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSI 379
L++ + E ++V + +E SN + YV +L +G+++K L
Sbjct: 378 YSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREME 437
Query: 380 SKDVK--KAYCNCLIDLCVNLNLLENA 404
+ V+ + + N +ID N L++A
Sbjct: 438 NSGVRPDRVFYNVMIDTFGKFNCLDHA 464
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 11/223 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ + +G D V+ EM+ G+ PN+ TY ++D M RA + + + + +M
Sbjct: 242 YTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMI 301
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT- 229
D+G PN T+ +++RA+ +A E L V+ +M++ G + YN L+ G +
Sbjct: 302 DSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSN 361
Query: 230 -DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A ++ M ++ C PD TF+ M+ + G V A ++ M E +PN+
Sbjct: 362 LDAAMKLLLKM-IAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYN 420
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
L++ +GK + D V+R + G+ P+ + FCG
Sbjct: 421 LLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNTYGALIETFCG 463
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ ++KL GN D +YE M+ + KPN+ITYN L+ G+ K V I
Sbjct: 380 DCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIK 439
Query: 167 KEMTDNGLSPNWNTYASLLRAY-GRARYGEDTLSVYREMKE-KGMQLSVTLYNTLLAMCA 224
K+M G+ PN NTY +L+ + GR + + + REM E K ++ +Y+ +L +
Sbjct: 440 KDMDAQGVEPNVNTYGALIETFCGRGNW-KRAYATLREMLEVKSLKPKKPVYDMVLVLLR 498
Query: 225 DVGYTDEAFEIFEDM 239
G + E+ E M
Sbjct: 499 KAGQLRKHEELVELM 513
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 87/207 (42%), Gaps = 37/207 (17%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVK---- 163
F+ +++ + AG + L V+ +M+ +G P++ITYN L++T G++ +K
Sbjct: 312 FNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLK 371
Query: 164 ------------------------------TIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
+Y+ M + PN TY L++ +G+ +
Sbjct: 372 MIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKS 431
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ L + ++M +G++ +V Y L+ G A+ +M ++ +P +
Sbjct: 432 MDMVLRIKKDMDAQGVEPNVNTYGALIETFCGRGNWKRAYATLREMLEVKSLKPKKPVYD 491
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGF 280
++ + G++ + E + M + GF
Sbjct: 492 MVLVLLRKAGQLRKHEELVELMADRGF 518
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y +++D + + + + EM + + +L+R Y RA + ++R M+
Sbjct: 137 YASMMDLLAKHHHFPLARHLLDEMRKRSIPISSQVILALIRRYVRAGMSSEASDLFRSME 196
Query: 206 EKGMQLS-VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
E G + + +LL + EA +F+ KS PD +++++ G
Sbjct: 197 EYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSVFT--PDVVLYTTLVHAWCRSGC 254
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +AE +F EM +AG PN++ T++I +A + L ++ + G P+
Sbjct: 255 LDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPN 308
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 118/233 (50%), Gaps = 11/233 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL---DTMGRAKRPW 160
I PN ++TLI +YG G ++ L V MK G++P TYN L+ +T G+ W
Sbjct: 202 IVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQ----W 257
Query: 161 QVK-TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q +Y+EM G + N +Y +L+ A+ +A L YR+M ++G + SV Y++L
Sbjct: 258 QTALQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITYSSL 317
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++ C G A F++ +NC+P+ TF+S+IT C+ + +A +F M + G
Sbjct: 318 ISACEKSGEWQLALRFFDECL-KDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQG 376
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
P++ T+LI Y + + ++A + G PD +++ + T
Sbjct: 377 CTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKPDSIVYNAIIDTLWDT 429
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 169/395 (42%), Gaps = 35/395 (8%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E S D + R + + + S L+ + G L+V+E+M+ G+ PN++TYN L+D
Sbjct: 157 ELSADMQRRGVQRNV--HTHSALMNVCIKCGQLKLALDVWEDMQRDGIVPNVVTYNTLID 214
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
G+ + Q + + M G+ P TY +L+ A + + L +Y EM+ G L
Sbjct: 215 VYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMIACNTSGQWQTALQLYEEMRAAGHAL 274
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ T YN L++ + G + + + M + C+ T+SS+I+ C G+ A
Sbjct: 275 NTTSYNALISAHSKAGDLPQVLDTYRQMV-QQGCERSVITYSSLISACEKSGEWQLALRF 333
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
F+E L+ PN+ SLI + + + + + G TPD V+T
Sbjct: 334 FDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELMQQQGCTPD---------VVTY 384
Query: 332 TPKEELGKLVECVEKSNSKLGYVVKLLLEE-QDIEGDFKKEATELFNSISKDVKKAYCNC 390
T L+ E+ G +L L+ Q ++ K + ++N+I + C
Sbjct: 385 T------ALISAYER-----GGKWQLALQAFQAMQAKGCKPDSIVYNAIIDTLWDTGCAW 433
Query: 391 LIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWIND 450
L+ +A LL +P L L +L+ G A +L+ W++D
Sbjct: 434 PQRQAAVLHRRASAGGLLR---------RAAHAAPGYLELCLHTLTAGVAALSLYTWLSD 484
Query: 451 LSK--ALESGEEFPPLLGINTGHGKHKYSDKGLAS 483
L + A E + P + I TG G+ K D A+
Sbjct: 485 LRQKVATEGADALPTRIAIVTGKGRGKDDDGASAA 519
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V Y +++C + A E+ DM+ Q + T S+++ +C G++ A ++
Sbjct: 136 VYTYTAAISICVSAQQLERALELSADMQR-RGVQRNVHTHSALMNVCIKCGQLKLALDVW 194
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+M G PN+ +LI YGK + + ++ L R+ GI P R
Sbjct: 195 EDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTR 242
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 194/442 (43%), Gaps = 30/442 (6%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D + +++++KLY G+F VY+ ++ G+KP+ TYN L+ R +RP +
Sbjct: 950 FKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGL 1009
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM GL P +TY SL+ A+G+ + E ++ + K +L + Y+ ++ M
Sbjct: 1010 SLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMF 1069
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +A ++ MK + +P T ++ S G+ EAE + + + G +
Sbjct: 1070 RNSGNHSKAEKLLGVMKEA-GVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLS 1128
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV--MTQTPKEELGKLV 341
+S+I Y K + ++ L + + G+ PD R C + ++Q E + L+
Sbjct: 1129 TLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAI-VLL 1187
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLL 401
+ + + L ++LL E+ D E + + + N L DL L
Sbjct: 1188 KALRDTGFDLP--IRLLTEKSDSLVSEVDNCLEKLGPLEDNAAFNFVNALEDLLWAFELR 1245
Query: 402 ENACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKA------ 454
A + +L + +Y D+ + W + +S G+AL L +W++ + +
Sbjct: 1246 ATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQASFLITIF 1305
Query: 455 LESGEEF---------------PPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDS 499
++ EE+ P + + TG +Y+ L S ++ L E+ +PF
Sbjct: 1306 VQLMEEYFYFWQDASLQGYPLSPKSVVLITGTA--EYNMVSLNSTLKAFLWEMGSPFLPC 1363
Query: 500 PDKVGWFLTTEAAAKSWLESRS 521
+ G + + + WL+ S
Sbjct: 1364 KTRSGLLVAKAHSLRMWLKDSS 1385
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI N + + VY +M A +P++ TYN ++ GR + ++
Sbjct: 325 DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLF 384
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K++ G P+ TY SLL A+ R + + +M + G YNT++ M
Sbjct: 385 KDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKR 444
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D AF+++ DMK S PD+ T++ +I + EA + +EML A +P L
Sbjct: 445 GQHDLAFQLYSDMKLSGR-SPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRT 503
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++LI Y KA + + + + GI PD +L+++ +
Sbjct: 504 FSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 548
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 9/296 (3%)
Query: 68 GKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNF--D 125
G T + + V ++ R +K++E R+R D +F+TLI +G +
Sbjct: 251 GNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRG--CEPDLVSFNTLINARLKSGTMVTN 308
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + E++ G++P++ITYN L+ R + +Y +M + P+ TY +++
Sbjct: 309 LAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMI 368
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
YGR + ++++++ KG YN+LL A G D+ EI EDM
Sbjct: 369 SVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKM-GF 427
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
D T++++I + RG+ A ++++M +G P+ T LI GKA +
Sbjct: 428 GKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAE 487
Query: 306 ALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGKLVECVEKSNSK---LGYVVKL 357
++ + + P R F + + E + +C+ +S K L Y V L
Sbjct: 488 VMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVML 543
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+ + GN D + E+M +G + +TYN ++ G+ + +Y
Sbjct: 395 DAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLY 454
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +G SP+ TY L+ + G+A ++ V EM ++ ++ ++ L+ A
Sbjct: 455 SDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKA 514
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA E F+ M S +PD +S M+ I + +A ++ EM+ F+P+ +
Sbjct: 515 GKRVEAEETFDCMLRS-GIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHAL 573
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+++ GK R +DV + + + EL C L+
Sbjct: 574 YEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILV 613
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
++ + L++ G D V +E++ +G K + + +LD A ++VK IY+
Sbjct: 850 DSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQG 909
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G P + Y ++ + + D ++ EM+ + ++++N++L + +G
Sbjct: 910 MKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGD 969
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ ++++ ++ + +PD T++++I + + E ++ +EM G EP L
Sbjct: 970 FKKTGQVYQLIQEA-GLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYK 1028
Query: 289 SLIQCYGKAQRTD 301
SLI +GK Q +
Sbjct: 1029 SLISAFGKLQMVE 1041
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LI Y +G ++ ++ M G P + + N L+ + R ++ +
Sbjct: 812 VDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVV 871
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+E+ D G + ++ +L A+ A + +Y+ MK G ++ LY ++ + A
Sbjct: 872 IQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAK 931
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ + +M+ + +PD ++S++ + + G + ++ + EAG +P+
Sbjct: 932 GKRVRDVEAMVSEMEVA-XFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDED 990
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+LI Y + +R ++ + ++ + +G+ P
Sbjct: 991 TYNTLILMYCRDRRPEEGLSLMHEMRRVGLEP 1022
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 118/232 (50%), Gaps = 4/232 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ F +++ Y A D + + M+ GV PN+ +N+LL + ++K + + I
Sbjct: 134 VNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEI 193
Query: 166 YKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++M NG SP+ TY+ LL +GRA VY +M + G Q + Y ++
Sbjct: 194 FEQM--NGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLC 251
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA + +DM +S CQP ++ +S ++ ++ +A A F +M + G P++
Sbjct: 252 KTGRVEEAVFVVQDM-TSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDV 310
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
V +L+ + K ++ D+ R ++ + GITP+ R +LN + K++
Sbjct: 311 VVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDD 362
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N ++ D +S L++ +G A N VY +M G +P+++TY ++D++ + R
Sbjct: 198 NGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVE 257
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + ++MT G P Y+ L+ YG ED ++ + +M++ G+ V +YN L+
Sbjct: 258 EAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALV 317
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
V D AF + +DM+ P+S T++ ++ GK EA +F M++
Sbjct: 318 TAFCKVKKFDNAFRVMDDME-GHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRC- 375
Query: 281 EPNLFVLTSLIQCYGKAQRTD 301
+P+ T +I+ + + R +
Sbjct: 376 QPDSDTYTMMIKMFCENDRLE 396
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%), Gaps = 3/227 (1%)
Query: 94 SYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
++ A+ K +PN F+TLIK G LN ++++ A+G + N I+Y L+D
Sbjct: 141 AFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLID 200
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + + + + + PN Y++++ + ++ D +Y EM KG+
Sbjct: 201 GLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 260
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+V Y+ L++ VG +A ++F M SEN +PD +TF+ ++ + GK+S A +
Sbjct: 261 NVVTYSALISGFFTVGKLKDAVDLFNKM-ISENIKPDVYTFNILVDVFCKSGKISYALKL 319
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+EM + G PN+ +S++ K R D V L +L + GI P+
Sbjct: 320 VDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPN 366
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 108/229 (47%), Gaps = 7/229 (3%)
Query: 96 DTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
D R + + PN +ST+I + + ++Y EM + G+ PN++TY+ L+
Sbjct: 213 DLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 272
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ ++ +M + P+ T+ L+ + ++ L + EM ++G ++
Sbjct: 273 FTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNI 332
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
Y+++L D+A + +K + +P+ T++ +I GK+ +A +F
Sbjct: 333 VTYSSILDALCKTHRVDKAVALLTKLKD-QGIRPNMHTYTILIDGLCTSGKLEDARNIFE 391
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRT--DDVVRALNRLPELGITPDDR 320
++L G++ + V+T ++ YG ++ D+ L+++ E G PD +
Sbjct: 392 DLLVKGYD--ITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAK 438
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ +E + D F+ L+ ++ +G L + +EM G PN++TY+++LD + +
Sbjct: 287 KMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTH 346
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + + ++ D G+ PN +TY L+ + ED +++ ++ KG ++V Y
Sbjct: 347 RVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYI 406
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+ G DEA + M+ + C PD+ T+ + +G+ AE + E
Sbjct: 407 VMFYGFCKKGLFDEASALLSKMEEN-GCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ L + ++M+ G+KPN++ N L++ + +++ ++ G +PN T+
Sbjct: 102 HYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFT 161
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+L++ L+ + ++ G Q + Y TL+ VG T A ++ +
Sbjct: 162 TLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV-DG 220
Query: 243 ENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ QP+ +S++I C+ K V++A +++EM+ G PN+ ++LI + +
Sbjct: 221 KLVQPNVVMYSTIID-GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLK 279
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
D V N++ I PD L++V ++ K
Sbjct: 280 DAVDLFNKMISENIKPDVYTFNILVDVFCKSGK 312
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVK 163
R+D A++T++ AG ++ + ++ E++ GV P ++TYN +LD GR R W ++
Sbjct: 170 RLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIV 229
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM G+ P+ T ++++ A R ++ ++ + ++K +G V YN LL +
Sbjct: 230 ALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVF 289
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + ++M+ + CQPD+ T++ + + G EA + M G PN
Sbjct: 290 GKAGNYTEALRVLKEME-QDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPN 348
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F +++ YG + D+ + +++ + G P+
Sbjct: 349 AFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPN 383
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AGN+ L V +EM+ G +P+ +TYN L T RA + MT
Sbjct: 282 YNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMT 341
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL PN TY +++ AYG ++ L+++ +MK+ G +V YN +L M
Sbjct: 342 SKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFT 401
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E+ +M S C P+ T+++M+ +C RG + M G E + +L
Sbjct: 402 VMLEMLGEMSRS-GCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTL 460
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ + + N + G P LLNV+++
Sbjct: 461 IAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSR 501
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNAF+ T++ YG G D L ++++MK G PN+ TYN +L +G+ R + +
Sbjct: 347 PNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEM 406
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM+ +G +PN T+ ++L G+ + V MK G++LS YNTL+A
Sbjct: 407 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGR 466
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G AF+++ +M +S P T+++++ + S +G S A+++ ++M GF+PN
Sbjct: 467 CGSRTNAFKMYNEM-TSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQ 525
Query: 286 VLTSLIQCYGKA 297
+ L+QCY K
Sbjct: 526 SYSLLLQCYAKG 537
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ F ST+I G D + +E++KA G P ++TYN LL G+A +
Sbjct: 240 VEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEAL 299
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ KEM +G P+ TY L Y RA + E+ M KG+ + YNT++
Sbjct: 300 RVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAY 359
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++G DEA +F+ MK S C P+ T++ ++ + + + + M EM +G PN
Sbjct: 360 GNIGKVDEALALFDQMKKS-GCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPN 418
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+++ GK D V R L + G+
Sbjct: 419 RVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGV 450
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 126/247 (51%), Gaps = 5/247 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG-NFDGCLNVY 131
++Y V RA + E++ + A + + P ++ ++ +YG G ++ + +
Sbjct: 174 RAYTTVLHALSRAGRY-ERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALL 232
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
+EM+A GV+P+ T + ++ R + ++++ G +P TY +LL+ +G+A
Sbjct: 233 DEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKA 292
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ L V +EM++ G Q YN L A G+ +EA + + M +S+ P+++T
Sbjct: 293 GNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTM-TSKGLLPNAFT 351
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++++T GKV EA A+F++M ++G PN+ ++ GK R ++ L +
Sbjct: 352 YNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMS 411
Query: 312 ELGITPD 318
G TP+
Sbjct: 412 RSGCTPN 418
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRA----RNEKWRIDPNAFSTLIKLYGTAGNF 124
++G +P W N K + Y TR ++ + + ++TLI YG G+
Sbjct: 412 RSGCTPNRVTW-NTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSR 470
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+Y EM + G P + TYN LL+ + R ++I +M G PN +Y+ L
Sbjct: 471 TNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLL 530
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM---CADVGYTDEAFEIFEDMKS 241
L+ Y + ++ +E+ + S + TL+ C +G ++AF+ +
Sbjct: 531 LQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVK---- 586
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ PD F+SM+++ + G S+ +F+ + ++G P+L SL+ Y K +
Sbjct: 587 ARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESW 646
Query: 302 DVVRALNRLPELGITPD 318
+ + LN+L + PD
Sbjct: 647 EAEKILNQLKSSQVKPD 663
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+S ++ R + ++ + ++S L++ Y GN G + +E+ V P+ + L+
Sbjct: 509 QSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIA 568
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ +R ++ ++E+ G +P+ + S+L Y + ++ +K+ G+
Sbjct: 569 NFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPD 628
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ YN+L+ M A + EA +I +KSS+ +PD +++++I +G + EA+ +
Sbjct: 629 LITYNSLMDMYAKCSESWEAEKILNQLKSSQ-VKPDVVSYNTVINGFCKQGLIKEAQRIL 687
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+EM+ G P + +L+ Y + + +N + + + P
Sbjct: 688 SEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKP 732
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 101/211 (47%), Gaps = 7/211 (3%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
++ + N K R +++ + +AR + D F++++ +Y G + +++ +
Sbjct: 563 RTLVIANFKCRRLGGIEKAFQEVKARG--YNPDLVIFNSMLSMYAKNGMYSKVTEIFDSI 620
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G+ P++ITYN+L+D + W+ + I ++ + + P+ +Y +++ + +
Sbjct: 621 KQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLI 680
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ + EM GM V Y+TL+ A + EA E+ M N +P T+
Sbjct: 681 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYM-IQHNLKPMELTYRR 739
Query: 255 MI-TICSCRGKVSEAEAMFNEMLEAGFEPNL 284
++ + C + + EA + +E+ E +PN
Sbjct: 740 VVDSYCKAK-RFEEARSFLSEVSET--DPNF 767
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
SLL+A + + E L++ R +G + L + A+ + G D + ++M
Sbjct: 108 SLLKALELSGHWEWALALLRWAGAEGAADASALEMVVRALGRE-GQHDAVCALLDEMPLP 166
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT-D 301
+ D +++++ S G+ A +F E+ G P L ++ YG+ R+
Sbjct: 167 PGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWP 226
Query: 302 DVVRALNRLPELGITPDD 319
+V L+ + G+ PDD
Sbjct: 227 RIVALLDEMRAAGVEPDD 244
>gi|242078445|ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
gi|241940341|gb|EES13486.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
Length = 602
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 120/230 (52%), Gaps = 7/230 (3%)
Query: 101 NEK---WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
NEK ++ D F +I +Y AG++ ++ +M + + +T+N+L+ K
Sbjct: 238 NEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERKIPLSTVTFNSLMSFETDYK 297
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V +IY +M G+ P+ +Y+ L++AYG+AR E+ L+V+ EM + G++ + YN
Sbjct: 298 ---EVSSIYDQMQRAGMKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYN 354
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
LL A G DEA +F+ M+ +PD ++++M+ ++ AE F + +
Sbjct: 355 ILLDAFAISGLVDEANTVFKAMR-RHRVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKD 413
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
G +PN+ V +L++ Y K + V+R R+ G+ P+ +++
Sbjct: 414 DGLKPNVVVYGTLMKGYSKLNNVEKVMRVYERMRIQGVEPNQTIYTTIMD 463
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 113/228 (49%), Gaps = 9/228 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F L+ YG G+F V + M G +P++I+ L++ GR K+ + +
Sbjct: 136 WDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAE 195
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM---KEKGMQLSVTLYNTLL 220
+++ M +G P+ TY +L++ ++ +++ ++ K + +++ ++
Sbjct: 196 AVFRRMQTSGPEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMI 255
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQP-DSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
M G +A ++F M SE P + TF+S+++ + +VS +++++M AG
Sbjct: 256 YMYKKAGDYAQARKLFAQM--SERKIPLSTVTFNSLMSFETDYKEVS---SIYDQMQRAG 310
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+P++ + LI+ YGKA+R ++ + + + G+ P + LL+
Sbjct: 311 MKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLD 358
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 6/216 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S LIK YG A + L V+EEM GV+P +YN LLD + + T++
Sbjct: 314 DVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVF 373
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + + P+ +Y +++ AY A +R +K+ G++ +V +Y TL+ + +
Sbjct: 374 KAMRRHRVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKL 433
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF- 285
++ ++E M+ + +P+ +++++ A F EM G+ P+
Sbjct: 434 NNVEKVMRVYERMR-IQGVEPNQTIYTTIMDAHGRNSDFGNAVIWFKEMEARGYPPDQKA 492
Query: 286 --VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+L SL + Q +++V N +L + PD+
Sbjct: 493 KNILLSLANTPEEQQEANELVG--NGAIQLEVKPDN 526
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+ R++P+ +++T++ Y A + +G + +K G+KPN++ Y L+ +
Sbjct: 378 RHRVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVE 437
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+V +Y+ M G+ PN Y +++ A+GR + + ++EM+ +G N LL
Sbjct: 438 KVMRVYERMRIQGVEPNQTIYTTIMDAHGRNSDFGNAVIWFKEMEARGYPPDQKAKNILL 497
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++ EA E+ + +PD+
Sbjct: 498 SLANTPEEQQEANELVGNGAIQLEVKPDN 526
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 150/310 (48%), Gaps = 11/310 (3%)
Query: 78 IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMK 135
IW++ + RA + + Y+ + WR P+ ++ L+ ++G AG + L ++++M
Sbjct: 94 IWLHARHQRADQARGLFYEMKV----WRCKPDVETYNALMNVHGRAGQWRWALQIFDDML 149
Query: 136 AIG--VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
+ P+ +YNNL++ G + + ++ I K MTDNG+ P+ TY +L A+
Sbjct: 150 QAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQ 209
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ Y + K + L +N +L +G ++A +F++M+ C+PD TF+
Sbjct: 210 PRHAVAYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFN 269
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+++ + + G++++A+ F+ M+ G P + +L+ Y + ++ + L +
Sbjct: 270 ALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKA 329
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKL--LLEEQDIEGDFKKE 371
PD LLN + E + V + K S+ +V L++ G +++
Sbjct: 330 KFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYER- 388
Query: 372 ATELFNSISK 381
A EL + +++
Sbjct: 389 ARELLHDMAE 398
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 42/285 (14%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
K+ D ++S+L+ +G AG + V++ MK KPN++T+N L+D A + +
Sbjct: 330 KFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERA 389
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ + +M + + PN T SL A RAR E V+ E K + + L+V +N +
Sbjct: 390 RELLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITA 449
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTF------------------------------ 252
+ G DEA + E M+ +N +P+ TF
Sbjct: 450 YIEAGQFDEAKALLEVME-EQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPL 508
Query: 253 -----SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
S++I + G +EA +F++M +AG + N+ TSL+ Y + DD A
Sbjct: 509 TVEPCSALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAY---RMYDDAQLAC 565
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLG 352
+ GITPD G L + + + E K+++ +EKS+ G
Sbjct: 566 EEMVAAGITPDSIAFGTLFVALNKANRSE--KVLQ-IEKSSRARG 607
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 84/211 (39%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
EEM A G+ P+ I + L + +A R +V I K G+ + Y L A R
Sbjct: 566 EEMVAAGITPDSIAFGTLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRL 625
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ E L +Y MK++ ++L+ T+ LL+ G D ++F +++ P
Sbjct: 626 KDWETALFLYEGMKKRRLRLTNTMVINLLSAVGRSGKLDRLHKVFLELQQQIGFVPTLQM 685
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++ +I S K + + + + EPN ++ C + + + + +
Sbjct: 686 YNILIDSYSRGLKWRKCLEVLGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIYGEVL 745
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
G+ PD + T EE L E
Sbjct: 746 AQGMEPDYNILKISVTAYTSLGMEEEASLTE 776
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKA-IGVKPNMITYNNLLDTMGRAKR 158
+ + R+ L+ G +G D V+ E++ IG P + YN L+D+ R +
Sbjct: 639 KKRRLRLTNTMVINLLSAVGRSGKLDRLHKVFLELQQQIGFVPTLQMYNILIDSYSRGLK 698
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ-------L 211
+ + + + L PNW TY +L + E L +Y E+ +GM+ +
Sbjct: 699 WRKCLEVLGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIYGEVLAQGMEPDYNILKI 758
Query: 212 SVTLYNTL 219
SVT Y +L
Sbjct: 759 SVTAYTSL 766
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 115/227 (50%), Gaps = 5/227 (2%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+ RI N F +I G F +V E+MKA G P++ITYN ++D +A + +
Sbjct: 222 RRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMF 281
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + KEM + PN T+ L+ + R V+ EM+ +G+Q +V YN+L+
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLI 341
Query: 221 -AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+C++ G DEA + +D S +P+ T++++I + + EA M +++ + G
Sbjct: 342 NGLCSN-GKLDEALGL-QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
PN+ +LI YGKA R DD + + + G+ P+ CL+
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ + PN +++LI + G D L + ++M +G+KPN++TYN L++ + K
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKML 385
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + + ++ GL+PN T+ +L+ AYG+A +D + M + G+ +V+ YN L
Sbjct: 386 KEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCL 445
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G EA ++ ++M+ + + D T++ ++ +G+ +A + +EM E G
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGN-GLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504
Query: 280 FEPNLFVLTSLIQCY 294
P+ +LI Y
Sbjct: 505 LNPSHLTYNALIDGY 519
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI + GN + +EM+ G+K +++TYN L+D + + + +
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM + GL+P+ TY +L+ Y R L+V M++KG + ++ YN L+ +
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA + +M + P+ T+ + + +EM+E GF P++
Sbjct: 557 KGKLEEANRLLNEM-LEKGLIPNRTTY----------------DILRDEMMEKGFIPDI 598
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+ D ++ L+ G + + +EM +G+ P+ +TYN L+D R
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALN 530
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ M G N TY L++ + E+ + EM EKG+ + T Y+ L
Sbjct: 531 VRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 115/227 (50%), Gaps = 5/227 (2%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+ RI N F +I G F +V E+MKA G P++ITYN ++D +A + +
Sbjct: 222 RRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMF 281
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + KEM + PN T+ L+ + R V+ EM+ +G+Q +V YN+L+
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLI 341
Query: 221 -AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+C++ G DEA + +D S +P+ T++++I + + EA M +++ + G
Sbjct: 342 NGLCSN-GKLDEALGL-QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
PN+ +LI YGKA R DD + + + G+ P+ CL+
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G+ PN+IT+N L+D G+A R + M D G+ PN +TY L+ + R ++
Sbjct: 399 GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE--NCQPDSWTFSSM 255
+ +EM+ G++ + YN L+ G T +A + ++M E + + T++ +
Sbjct: 459 RKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVL 518
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I +GK+ EA + NEMLE G PN + T D++R + + E G
Sbjct: 519 IKGFCNKGKLEEANRLLNEMLEKGLIPN--------------RTTYDILR--DEMMEKGF 562
Query: 316 TPD 318
PD
Sbjct: 563 IPD 565
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI + GN + +EM+ G+K +++TYN L+D + + + +
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 166 YKEMT---DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
EMT G N TY L++ + E+ + EM EKG+ + T Y+ L
Sbjct: 497 LDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T+ E D A+++L+ + G G L ++ M P+++TY++L+D++G+
Sbjct: 762 TKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKE 821
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + ++ G +PN Y+SL+ ++G+ + L ++ EM+ + ++ Y
Sbjct: 822 GRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTY 881
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N LL+ A G + A ++ E+M+ C PD T++ +I G V EAE+ F M
Sbjct: 882 NNLLSGLAKAGRLNVAEKLLEEMEKV-GCVPDLVTYNILIDGVGKMGMVDEAESYFKRMK 940
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
E G P++ TSLI+ GK + + + + E G P L++++ + K
Sbjct: 941 EKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGK 998
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 146/315 (46%), Gaps = 38/315 (12%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N+ D +++L+ G +G + N++ +M G +P+++ Y +L+D +G+ +
Sbjct: 730 KNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKL 789
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
I++ M P+ TY+SL+ + G+ E+ + KG +V +Y++L
Sbjct: 790 SHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSL 849
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G D A E+FE+M+ + C P+ T++++++ + G+++ AE + EM + G
Sbjct: 850 IDSFGKKGMVDRALELFEEMQRRQ-CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
P+L LI GK D+ R+ E GI PD V+T T
Sbjct: 909 CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPD---------VITFT------S 953
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLN 399
L+E LG V KLL EA ELF+S+ ++ Y ++ V ++
Sbjct: 954 LIE-------SLGKVDKLL------------EACELFDSMEEE---GYNPSVVTYNVLID 991
Query: 400 LLENACKLLELGLTL 414
+L A K+ E +
Sbjct: 992 ILGRAGKVHEAAMIF 1006
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 99/181 (54%), Gaps = 3/181 (1%)
Query: 103 KWRIDP--NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K IDP + F+ LI +GN D + MK + PN++TY L++ + +A R
Sbjct: 315 KSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLE 374
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ EM +N SP+ Y +L+ G+A + +++EMK++G+ ++ YN ++
Sbjct: 375 EACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMI 434
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
++ G EA+++F D+K + PD +T++++I + G++ + A+ EM+E G
Sbjct: 435 SVLGKAGRQPEAWQLFHDLK-EQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGG 493
Query: 281 E 281
E
Sbjct: 494 E 494
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +S+LI +G G D L ++EEM+ PN++TYNNLL + +A R + +
Sbjct: 841 PNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKL 900
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM G P+ TY L+ G+ ++ S ++ MKEKG+ V + +L+
Sbjct: 901 LEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGK 960
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
V EA E+F+ M+ E P T++ +I I GKV EA +F+EM G P+
Sbjct: 961 VDKLLEACELFDSME-EEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
++RI P+A F + + +G D +EM G+ P + T+ L+D + ++
Sbjct: 280 QFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNID 339
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + M + SPN TY +L+ +A E+ V+ EMKE YNTL+
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLI 399
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G D A +F++MK P+ T++ MI++ G+ EA +F+++ E G
Sbjct: 400 DGLGKAGEADMACGLFKEMK-DRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
P++F +LI GK + D V+ + + E G
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 149/354 (42%), Gaps = 56/354 (15%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---------- 151
E RI + ++L++ +G+ N G L ++ +MK+ G P+ YN +L+
Sbjct: 211 EGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHS 270
Query: 152 -------------------------TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ R+ R +EM +G+ P +T+ L+
Sbjct: 271 AVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLID 330
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
A ++ ++ + MK +V Y TL+ A G +EA E+F +MK + NC
Sbjct: 331 ALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKEN-NCS 389
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD+ ++++I G+ A +F EM + G PNL +I GKA R + +
Sbjct: 390 PDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQL 449
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQ---------TPKEELGKLVECVEKSNSKLGYVVKL 357
+ L E G PD L++V+ + KE + K EC+ +S G+
Sbjct: 450 FHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGH---- 505
Query: 358 LLEEQDIEGDFKKEATELFNSIS-KDVKKAYCNCLIDLCVNLNLLENACKLLEL 410
E IEG + T + S+ K + + N L+ ++ ++ A KLLE+
Sbjct: 506 ---EGTIEG---ADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEV 553
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ + G+ D + + E MK P ++TY L+D +G+A R + ++ +EM
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ TY+SL+ ++ + E++LS++ EM KG V+ Y+ ++ D
Sbjct: 591 KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVD 650
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A ++F MK E +P + ++++ K+ A +FNE+ E+ P+ FV +
Sbjct: 651 QALDVFGRMK-EEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ K+ R D+ + ++ + I PD
Sbjct: 710 VNGLVKSNRVDEACKLVDSMKNQNILPD 737
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 6/224 (2%)
Query: 92 EKSYDTRARNEKWRIDP--NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+++ D R ++ ++P + TL+ D L ++ E++ + P+ YN +
Sbjct: 650 DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ + ++ R + + M + + P+ TY SLL G++ E+ +++ +M E+G
Sbjct: 710 VNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGH 769
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ V Y +L+ + G A IF M + + C PD T+SS+I G+V EA
Sbjct: 770 EPDVVAYTSLMDVLGKGGKLSHALIIFRAM-AKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
F + G PN+ V +SLI +GK D RAL E+
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVD---RALELFEEM 869
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVK------------------------P 141
P+ F+ TLI + G G D L + +EM G + P
Sbjct: 460 PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYP 519
Query: 142 NM-------ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
++ ITYN L+ + + + M + P TY +L+ G+A
Sbjct: 520 SLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRL 579
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ +S+ REM+++G + SV Y++L+A +E+ +F++M + C D T+S
Sbjct: 580 DEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM-VRKGCVADVSTYSL 638
Query: 255 MITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I C C+ V +A +F M E G EP L +L+ K ++ D ++ N L E
Sbjct: 639 VIN-CLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES 697
Query: 314 GITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
+ PD ++N + ++ + +E KLV+ ++ N
Sbjct: 698 SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQN 733
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 1/192 (0%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY ++ + A+ V I M G + + SLLR +G L ++ +M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
K G S +YN +L + G+ A +F + QPD+ TF + + G+
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL-GQFRIQPDAQTFRIFVHSFNRSGR 302
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ A EM+++G +P + T LI K+ D+ + N + L +P+
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTT 362
Query: 325 LLNVMTQTPKEE 336
L+N + + + E
Sbjct: 363 LVNGLAKAGRLE 374
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 99/260 (38%), Gaps = 36/260 (13%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +IK A D + + M G + +M +LL T G I+ +M
Sbjct: 185 YTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMK 244
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVY----------------------------- 201
G +P+ N Y +L + + + V+
Sbjct: 245 SFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLD 304
Query: 202 ------REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+EM + G+ V + L+ G DEA + F MK+ C P+ T++++
Sbjct: 305 PAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR-CSPNVVTYTTL 363
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ + G++ EA +F EM E P+ +LI GKA D + + G+
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423
Query: 316 TPDDRFCGCLLNVMTQTPKE 335
P+ R +++V+ + ++
Sbjct: 424 VPNLRTYNIMISVLGKAGRQ 443
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+SY R + + D F++LI+ G +++ M+ G P+++TYN L+D
Sbjct: 933 ESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDI 992
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+GRA + + I+ EM G P+ T + R
Sbjct: 993 LGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++TLI +G + + E+M G KP+ TYN L+ + + V +
Sbjct: 520 LDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRV 579
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
E D+G+ PN TYA +L Y A ++ +S++ ++ ++LS +YN L+A +
Sbjct: 580 LHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSK 639
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EAF++ + M+SS N P +T+SS+I C V EA+ +F EM G PN+F
Sbjct: 640 AGNFTEAFKLRDAMRSS-NIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVF 698
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+LI Y K + D + L + I P+
Sbjct: 699 CYTALIGGYCKLGQMDQIESILQEMTSNCIQPN 731
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 39/249 (15%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LI Y GN D L V ++M G+KPN +T+N LL R + Q + +
Sbjct: 344 PNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQV 403
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV------------------------- 200
+ + N LS N + + +L ++ + L +
Sbjct: 404 LEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCK 463
Query: 201 -----------YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+R +KG+ + T N LL + G +E F + ++M D
Sbjct: 464 CGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEM-VERGLVLDG 522
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+++++I C GK+ EA + +M++ GF+P+ + L++ + DDV R L+
Sbjct: 523 ISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHE 582
Query: 310 LPELGITPD 318
+ G+ P+
Sbjct: 583 AKDHGVVPN 591
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
ID ++T I Y G D + ++ +M GV PN++TYNNL+D + ++ R +
Sbjct: 239 IDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMF 298
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M +N ++P+ TY L+ + ++ SV EM KG + ++N L+ +
Sbjct: 299 KGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSR 358
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A + +DM + + +P++ T ++++ ++ +AE + +L N
Sbjct: 359 KGNMDDALRVRDDM-TLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNED 417
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++ K+ + D ++ + L I +D
Sbjct: 418 ACSYVLHLLCKSSKFDSALKIVKALLLRNIKVND 451
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
GV P++ + N L+ ++ ++ + ++ M G+ + TYA+ + AY + ++
Sbjct: 201 GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEA 260
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ ++ +M E G+ +V YN L+ G +EA +F+ P T+ ++
Sbjct: 261 VGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEAL-MFKGRMVENKVNPSLVTYGILVN 319
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
K EA ++ EM GF PN FV +LI Y + DD +R + + G+ P
Sbjct: 320 GLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKP 379
Query: 318 DDRFCGCLLNVMTQTPKEE 336
+ LL +T + E
Sbjct: 380 NAVTHNTLLQGFCRTNQME 398
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 6/252 (2%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEK-WRIDPNAFSTLIKL--YGTAGNFD 125
K G P +Y + A K K K + PN ++ + L Y A D
Sbjct: 550 KQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRID 609
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
++++ ++ V+ + + YN L+ +A + + M + + P TY+S++
Sbjct: 610 NAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSII 669
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
E+ ++ EM+ +G+ +V Y L+ +G D+ I ++M S NC
Sbjct: 670 HGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTS--NC 727
Query: 246 -QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
QP+ T++ MI G EA + NEM+ G P+ T L + Y K ++ +
Sbjct: 728 IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETL 787
Query: 305 RALNRLPELGIT 316
+ +P IT
Sbjct: 788 QGDTAVPLEEIT 799
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V++ M GV ++ TY ++ + + + ++ +M + G+ PN TY +L+
Sbjct: 228 VFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLC 287
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++ E+ L M E + S+ Y L+ DEA + +M S+ P+
Sbjct: 288 KSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEM-YSKGFSPNE 346
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+ F+++I S +G + +A + ++M G +PN +L+Q + + + + + L
Sbjct: 347 FVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEY 406
Query: 310 LPELGITPDDRFCGCLLNVMTQTPK 334
L ++ ++ C +L+++ ++ K
Sbjct: 407 LLSNVLSVNEDACSYVLHLLCKSSK 431
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)
Query: 76 SYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGN--FDGCLNVY 131
SY+ N SK +++ R I P F+ ++G N + ++
Sbjct: 626 SYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIF 685
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
EEM+ G+ PN+ Y L+ + + Q+++I +EMT N + PN TY ++ Y +
Sbjct: 686 EEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKM 745
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
++ + EM G+ Y L GY E E+ E ++ + T
Sbjct: 746 GNTKEATKLLNEMIANGISPDTVTYTVL-----QKGYCKEN-ELEETLQGDTAVPLEEIT 799
Query: 252 FSSMI 256
+++++
Sbjct: 800 YTTLV 804
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 132/270 (48%), Gaps = 9/270 (3%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ F +++ Y A FD + + M+ GV PN+ +N+LL + ++K + + I
Sbjct: 135 VNVETFGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEI 194
Query: 166 YKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +M NG +P+ TY+ LL +G+A VY EM + G Q + Y ++
Sbjct: 195 FDKM--NGRFNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLC 252
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA + +DM SS CQP ++ +S ++ ++ +A A F +M + G P++
Sbjct: 253 KTGRVEEAVLVVQDM-SSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDV 311
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LGK 339
V +L+ + K ++ ++ R ++ + GI P+ R +LN + K++ +
Sbjct: 312 VVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRR 371
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEGDFK 369
+++ + + ++K+ E ++E K
Sbjct: 372 MIKRCQPDSDTYTMMIKMFCENDNVEMALK 401
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N ++ D +S L++ +G A N VY EM G +P+++TY ++D++ + R
Sbjct: 199 NGRFNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVE 258
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + ++M+ G P Y+ L+ YG ED ++ + +M++ G+ V +YN L+
Sbjct: 259 EAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALV 318
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
V + AF + +DM+ P+S T++ ++ GK EA +F M++
Sbjct: 319 TAFCKVKKFENAFRVMDDME-GHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRC- 376
Query: 281 EPNLFVLTSLIQCY 294
+P+ T +I+ +
Sbjct: 377 QPDSDTYTMMIKMF 390
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 181/434 (41%), Gaps = 50/434 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ L+ LYG G FDG ++ EM+ V P+ TYN L G +V ++ +M
Sbjct: 381 YRVLLDLYGRQGRFDGVRQLFREMR-TAVPPDTATYNVLFRVFGDGGFFKEVVELFHDML 439
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ T +++ A G D V M +GM + Y L+ +
Sbjct: 440 KTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYE 499
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFVLTS 289
EA+ F +M + P T++++ + G EAEA+F+ M AG + + +
Sbjct: 500 EAYVAF-NMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDA 558
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKLVECV 344
LI+ Y + R DD V+A + + PD+R +LN + KE+ +L V
Sbjct: 559 LIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSV 618
Query: 345 EKSNSKLGYVVKL--------------LLEEQD--------------IEGDFKKEAT--- 373
S + Y + L LLEE I+G++ +
Sbjct: 619 TMP-SVIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQM 677
Query: 374 ---ELFNSISK--DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
L NS + D + N L+ + A ++L+ + ++ ++ + W
Sbjct: 678 VEYVLENSTMEGCDYSFRFFNALLGVLWWFGQKGRAARVLDQAVKFGLFPELYRDTKLVW 737
Query: 429 SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS--DKGL--ASV 484
SL + +S+G AL A+ +W+N L L E+ P L + G+ + S +GL A V
Sbjct: 738 SLDVHRMSMGGALVAVSVWLNKLYDRLVEDEDLPQLASVVVLRGEMEKSTVTRGLPIAKV 797
Query: 485 FESHLKE-LNAPFH 497
S L + L+A FH
Sbjct: 798 VYSFLNDTLSASFH 811
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 3/222 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TL+ D + M GV P+ ++Y +++D A +
Sbjct: 270 RPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRAAE 329
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM G + + + Y L+ A+ R D ++V R+M+ G + Y LL +
Sbjct: 330 LFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYG 389
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D ++F +M+++ PD+ T++ + + G E +F++ML+ G +P++
Sbjct: 390 RQGRFDGVRQLFREMRTA--VPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDM 447
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCL 325
+++ G D L + G+ P D + G +
Sbjct: 448 VTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLV 489
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Query: 124 FDGCLNVYEEMK---AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
FD L ++ EM+ + V+P++ TYN LL Q + + M + G+SP+ +
Sbjct: 251 FDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVS 310
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y ++ A+ A ++ EM G + Y L+ VG T +A + M+
Sbjct: 311 YRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ 370
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
++ C P + T+ ++ + +G+ +F EM A P+ L + +G
Sbjct: 371 -ADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFF 428
Query: 301 DDVVRALNRLPELGITPDDRFC 322
+VV + + + G+ PD C
Sbjct: 429 KEVVELFHDMLKTGVQPDMVTC 450
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 9/226 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW----QVKTI 165
++++LI Y + + ++MKA GV P TYN +L RA P + +
Sbjct: 198 SYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGL 257
Query: 166 YKEMTDNG---LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM + + P+ TY +LL A + + + M E G+ Y ++
Sbjct: 258 FAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDA 317
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
A G A E+F +M ++ + D+ + ++ + G ++A A+ +M G P
Sbjct: 318 FASAGNLSRAAELFSEMAATGHT-ADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 376
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
L+ YG+ R D VR L R + PD L V
Sbjct: 377 TAATYRVLLDLYGRQGRFDG-VRQLFREMRTAVPPDTATYNVLFRV 421
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 181/434 (41%), Gaps = 50/434 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ L+ LYG G FDG ++ EM+ V P+ TYN L G +V ++ +M
Sbjct: 359 YRVLLDLYGRQGRFDGVRQLFREMR-TAVPPDTATYNVLFRVFGDGGFFKEVVELFHDML 417
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ T +++ A G D V M +GM + Y L+ +
Sbjct: 418 KTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYE 477
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFVLTS 289
EA+ F +M + P T++++ + G EAEA+F+ M AG + + +
Sbjct: 478 EAYVAF-NMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDA 536
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKLVECV 344
LI+ Y + R DD V+A + + PD+R +LN + KE+ +L V
Sbjct: 537 LIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSV 596
Query: 345 EKSNSKLGYVVKL--------------LLEEQD--------------IEGDFKKEAT--- 373
S + Y + L LLEE I+G++ +
Sbjct: 597 TMP-SVIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQM 655
Query: 374 ---ELFNSISK--DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
L NS + D + N L+ + A ++L+ + ++ ++ + W
Sbjct: 656 VEYVLENSTMEGCDYSFRFFNALLGVLWWFGQKGRAARVLDQAVKFGLFPELYRDTKLVW 715
Query: 429 SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS--DKGL--ASV 484
SL + +S+G AL A+ +W+N L L E+ P L + G+ + S +GL A V
Sbjct: 716 SLDVHRMSMGGALVAVSVWLNKLYDRLVEDEDLPQLASVVVLRGEMEKSTVTRGLPIAKV 775
Query: 485 FESHLKE-LNAPFH 497
S L + L+A FH
Sbjct: 776 VYSFLNDTLSASFH 789
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 3/222 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TL+ D + M GV P+ ++Y +++D A +
Sbjct: 248 RPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRAAE 307
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM G + + + Y L+ A+ R D ++V R+M+ G + Y LL +
Sbjct: 308 LFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYG 367
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D ++F +M+++ PD+ T++ + + G E +F++ML+ G +P++
Sbjct: 368 RQGRFDGVRQLFREMRTA--VPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDM 425
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCL 325
+++ G D L + G+ P D + G +
Sbjct: 426 VTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLV 467
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Query: 124 FDGCLNVYEEMK---AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
FD L ++ EM+ + V+P++ TYN LL Q + + M + G+SP+ +
Sbjct: 229 FDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVS 288
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y ++ A+ A ++ EM G + Y L+ VG T +A + M+
Sbjct: 289 YRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ 348
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
++ C P + T+ ++ + +G+ +F EM A P+ L + +G
Sbjct: 349 -ADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFF 406
Query: 301 DDVVRALNRLPELGITPDDRFC 322
+VV + + + G+ PD C
Sbjct: 407 KEVVELFHDMLKTGVQPDMVTC 428
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 9/227 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW----QVKTI 165
++++LI Y + + ++MKA GV P TYN +L RA P + +
Sbjct: 176 SYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGL 235
Query: 166 YKEMTDNG---LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM + + P+ TY +LL A + + + M E G+ Y ++
Sbjct: 236 FAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDA 295
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
A G A E+F +M ++ + D+ + ++ + G ++A A+ +M G P
Sbjct: 296 FASAGNLSRAAELFSEMAATGHT-ADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 354
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
L+ YG+ R D VR L R + PD L V
Sbjct: 355 TAATYRVLLDLYGRQGRFDG-VRQLFREMRTAVPPDTATYNVLFRVF 400
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 38/250 (15%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT----------- 152
ID N +S L+ + A D +VY++M G PN++TYN L+D
Sbjct: 31 IDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVEASKRKTTERR 90
Query: 153 ------------------------MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++ +P Q +Y++M G+ P+ TY +L+ AY
Sbjct: 91 RLAVALVRSGIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAY 150
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ E L ++R+M +G + +V Y++L++ C G + A E+F M ENC+P+
Sbjct: 151 GKKGQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMH-KENCKPN 209
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T++S+I CS G +A +F +M G +P+ LI Y + + ++A
Sbjct: 210 VVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFE 269
Query: 309 RLPELGITPD 318
++ G PD
Sbjct: 270 QMQSQGCHPD 279
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I +G + L VYE+M A GVKP+ TY L+ G+ + + I+++M
Sbjct: 108 YNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMI 167
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G N TY+SL+ A +A E L ++ +M ++ + +V YN+L+A C+ G+ +
Sbjct: 168 RRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWE 227
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A E+FE M+ ++ C+PDS T+ +IT G+ A F +M G P+ V SL
Sbjct: 228 KASELFEQMQ-TQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSL 286
Query: 291 I 291
+
Sbjct: 287 M 287
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I G+ L + EM++ G+ N+ TY+ L++ +A + +YK+M
Sbjct: 3 YTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQML 62
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G SPN TY L+ R + + + G+Q V YNT+++ C G +
Sbjct: 63 EEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQPE 122
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A +++E M ++ +P + T++++I+ +G+V +A +F +M+ G E N+ +SL
Sbjct: 123 QALKVYEKMLAA-GVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSL 181
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I KA R + + +++ + P+
Sbjct: 182 ISACEKAGRWEMALELFSKMHKENCKPN 209
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 16/189 (8%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY ++ G ++ + + EM G+ N +TY++L+ +A + VY++M
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
E+G ++ YN L+ + A T E + + S Q + T++++I+ C+ G+
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRS-GIQAEVRTYNTVISACNKSGQ 120
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD---DVVRALNRLPELGITPDDRF 321
+A ++ +ML AG +P+ T+LI YGK + + D+ R + R
Sbjct: 121 PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRR----------- 169
Query: 322 CGCLLNVMT 330
GC NV+T
Sbjct: 170 -GCERNVIT 177
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +S L+ Y AG ++ + +EM+A GVKP+ ++ +L R + WQ +
Sbjct: 333 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGDWQKAFAV 391
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ + Y ++ +G+ + + M+E+ ++ V +NTL+
Sbjct: 392 LREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCK 451
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A E+FE+M+ S NC P + T++ MI + + + EAM +EM E G PN+
Sbjct: 452 GGRHDRAMELFEEMRES-NCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNII 510
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R + + + + G+ P L+N Q
Sbjct: 511 TYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 556
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R E+ D ++TLI + G D + ++EEM+ P TYN +++ +G +
Sbjct: 429 RMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQE 488
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R V+ + EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 489 RWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYH 548
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G D A + + MK ++ + +S+I +V EA ++ M E
Sbjct: 549 ALVNAYAQRGLADHALNVVKAMK-ADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKE 607
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G P++ T+L++ + ++ D V + G PD
Sbjct: 608 NGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 648
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + ++ +I +G ++ ++ M+ ++P+++T+N L+D + R +
Sbjct: 401 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAME 460
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM ++ P TY ++ G E ++ EMKE+G+ ++ Y TL+ +
Sbjct: 461 LFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYG 520
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA + E MK ++ +P + +++ + RG A + M G E ++
Sbjct: 521 RSGRYKEAIDCIEAMK-ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSI 579
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
VL SLI +G+ +R + L + E G+ PD
Sbjct: 580 LVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPD 613
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 2/229 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
NA + LI G+AG ++ E G +KP YN LL R + +
Sbjct: 264 NAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLD 323
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM+ G++P+ TY+ L+ AY RA E + +EM+ G++ S +++ +LA D G
Sbjct: 324 EMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRG 383
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+AF + +M++S +PD ++ MI + A F+ M E EP++
Sbjct: 384 DWQKAFAVLREMQAS-GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTW 442
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+LI + K R D + + E P ++N++ + + E
Sbjct: 443 NTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWE 491
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 9/260 (3%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR---EMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ P+ +Y+ LL + R D + R +++E ++ L++ L++ A
Sbjct: 181 LREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFAR 240
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
D A E+ ++ P S +++I+ G+V+EAEA+F E AG +P
Sbjct: 241 AALPDAALELLASAQAI-GLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRT 299
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVEC 343
+L++ Y + + + L+ + + G+ PD+ L++ T+ + E + L++
Sbjct: 300 RAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 344 VEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISKDVK--KAYCNCLIDLCVNLNL 400
+E K YV +L GD++K L + V+ + + N +ID N
Sbjct: 360 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419
Query: 401 LENACKLLELGLTLEVYTDI 420
L +A + E+ D+
Sbjct: 420 LGHAMDAFDRMREEEIEPDV 439
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++LI +G +V + MK G++P++ITY L+ + R ++ +V IY+EM
Sbjct: 582 LNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMI 641
Query: 171 DNGLSPNWNTYASL 184
+G +P+ A L
Sbjct: 642 TSGCAPDRKARAML 655
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ L+ +YG G + EM+A G+ PN++TYN L+ RA + +
Sbjct: 317 PNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAAL 376
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K + GL P+ TY +L+ A+ RA E L + EM++ ++ YN L+ +
Sbjct: 377 KKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGR 436
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ D+ ++F+ M+ +NC PD T++S++ G ++E +F EM AG+ P +
Sbjct: 437 MEKLDDMMKVFKFMQ-EKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVD 495
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
LI+CYG+ D V L G+ P
Sbjct: 496 TFNILIECYGRCGYVDYSVDIYKGLLRTGLQP 527
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 137/256 (53%), Gaps = 3/256 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+++ ++E + +D A+++LI + A FD + ++E M+ G + N +TYN +LD G
Sbjct: 200 FESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYG 259
Query: 155 RAKRPW-QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ W +++++++EM D +SP+ TY +++ A + + ++ L +++EMKE G +
Sbjct: 260 KRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNR 319
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
YN LL + G EA E+ +M+++ P+ T++ +I + G EA A+
Sbjct: 320 VTYNALLDVYGKGGMHKEASELLVEMEAA-GISPNIVTYNELIAAYARAGLCDEAAALKK 378
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
+L G P+ F +LI + +A+R + + + + TP+ L+++ +
Sbjct: 379 SLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRME 438
Query: 334 K-EELGKLVECVEKSN 348
K +++ K+ + +++ N
Sbjct: 439 KLDDMMKVFKFMQEKN 454
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI + A ++ L + EM+ PN++TYN L+D GR ++ + ++
Sbjct: 388 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVF 447
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + +P+ T+ SLL+++G + +V+REMK G V +N L+
Sbjct: 448 KFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRC 507
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY D + +I++ + + QP TF++++ + G+ + E + EM EAG + +
Sbjct: 508 GYVDYSVDIYKGLLRT-GLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDAC 566
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
LI Y + + + + ++ L + P
Sbjct: 567 HAGLIHSYANSGQFFQLRKYIDELEKSAKQP 597
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 113/247 (45%), Gaps = 37/247 (14%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+ LI+ YG G D +++Y+ + G++P + T+ L+ ++ R R Q + + +E
Sbjct: 495 DTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQE 554
Query: 169 MTDNGLSPNWNTYASLLRAYGRA----------------------------------RYG 194
M + GL + +A L+ +Y + + G
Sbjct: 555 MAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCG 614
Query: 195 EDTLS--VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
D + ++ + G + ++N +++MCA G+ + A ++ E+++ ++ +PD T+
Sbjct: 615 MDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQ-LKPDGVTY 673
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ ++++ G +AE + +EM AG PNL +L+ Y K R DD R +
Sbjct: 674 NCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA 733
Query: 313 LGITPDD 319
+ PD+
Sbjct: 734 ARVRPDN 740
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+K +G G NV+ EMK G P + T+N L++ GR IY
Sbjct: 458 DLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIY 517
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K + GL P T+A+L+ + R + V +EM E G+QLS + L+ A+
Sbjct: 518 KGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANS 577
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLF 285
G + + ++++ S QP S + C+ G +EA+ N++ + G P++
Sbjct: 578 GQFFQLRKYIDELEKSAK-QPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIK 636
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
V ++I K + V+ L + + + PD CL+++
Sbjct: 637 VFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSM 679
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 114 LIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKR-PWQVKTIYKEMTD 171
+K G G + L V+E + K K + ++L +G ++ P ++ D
Sbjct: 147 FVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQD 206
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT-D 230
S + Y SL+ RAR ++ ++++ M+ +G + + YN +L + G + D
Sbjct: 207 ESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWD 266
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+F++MK E PD +T+++MIT C EA +F EM EAG PN +L
Sbjct: 267 RIQSLFQEMKDLE-ISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 325
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ YGK + L + GI+P+
Sbjct: 326 LDVYGKGGMHKEASELLVEMEAAGISPN 353
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I + G + + + EE++ +KP+ +TYN L+ GR ++ + +
Sbjct: 634 DIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVM 693
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G +PN TY +LL +Y + +D V+ +M ++ +NTL+ + +
Sbjct: 694 SEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSL 753
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G EA + E M + CQP TF +++
Sbjct: 754 GLYKEALSVIEYM-TEHGCQPTQITFKALL 782
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTI--YKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
G P++ +N ++ AKR W + + +E+ L P+ TY L+ YGR
Sbjct: 630 GHSPDIKVFNAMISMC--AKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYY 687
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
V EM+ G ++ YNTLL G D+A +F DM ++ +PD++TF+++
Sbjct: 688 KAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAA-RVRPDNFTFNTL 746
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
+ S G EA ++ M E G +P +L+ Y +
Sbjct: 747 VGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
RA KL E+ R + + D ++ L+ +YG G + V EM+ G PN+IT
Sbjct: 653 RAVKLLEE-----IRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLIT 707
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN LL + + R ++ +M + P+ T+ +L+ +Y ++ LSV M
Sbjct: 708 YNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMT 767
Query: 206 EKGMQLSVTLYNTLL 220
E G Q + + LL
Sbjct: 768 EHGCQPTQITFKALL 782
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TL+ Y G D V+ +M A V+P+ T+N L+ + + ++
Sbjct: 703 PNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSV 762
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGR 190
+ MT++G P T+ +LL Y R
Sbjct: 763 IEYMTEHGCQPTQITFKALLDGYNR 787
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 108/213 (50%), Gaps = 2/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKT 164
+D A++T++ G ++ L ++ E+K GV P + YN +LD GR R W Q+
Sbjct: 185 LDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVA 244
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +EM G+ P+ T ++++ A GR ++ ++ + ++K +G V YN LL +
Sbjct: 245 MLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFG 304
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA + ++M+ S C+PD+ T++ + + G EA + M+ G PN
Sbjct: 305 KAGNYMEALRVLKEMEES-GCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNA 363
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
F +++ YG A + D+ + + + + G P
Sbjct: 364 FTYNTIMTAYGNAGKVDEALALFDWMKKNGFIP 396
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++++G AGN+ L V +EM+ G KP+ +TYN L + RA + M
Sbjct: 296 YNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMV 355
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN TY +++ AYG A ++ L+++ MK+ G V YN +L M +
Sbjct: 356 SKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFN 415
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E+ +M S C P+ T+++M+ +C RG + M G E +L
Sbjct: 416 VMLEMLGEMSRS-GCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTL 474
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I YG+ + + + + G TP LL+V+++
Sbjct: 475 ISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSR 515
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 105/194 (54%), Gaps = 3/194 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PNAF+ T++ YG AG D L +++ MK G P + TYN +L +G+ R +
Sbjct: 359 ILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVML 418
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM+ +G +PN T+ ++L G+ V MK G++L +NTL++
Sbjct: 419 EMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAY 478
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G AF+++++M ++ P T+++++++ S +G + A+++ N+M GF+PN
Sbjct: 479 GRCGSRANAFKMYDEMTAA-GFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPN 537
Query: 284 LFVLTSLIQCYGKA 297
+ L+QC+ K
Sbjct: 538 DMSYSLLLQCHAKG 551
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 2/209 (0%)
Query: 111 FSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ ++ +YG G ++ + + EEM+A GV+P+ T + ++ GR + ++++
Sbjct: 225 YNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDL 284
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P TY +LL+ +G+A + L V +EM+E G + YN L A G+
Sbjct: 285 KSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFY 344
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+EA + + M S+ P+++T+++++T GKV EA A+F+ M + GF P +
Sbjct: 345 EEAAKCLDTM-VSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNL 403
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ GK R + ++ L + G TP+
Sbjct: 404 ILGMLGKKSRFNVMLEMLGEMSRSGCTPN 432
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 12/257 (4%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRA--RNEKWRID--PNAFSTLIKLYGTAGNF 124
++G +P W N K + Y TR R + ++ + F+TLI YG G+
Sbjct: 426 RSGCTPNRVTW-NTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSR 484
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+Y+EM A G P + TYN LL + R ++I +M + G PN +Y+ L
Sbjct: 485 ANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLL 544
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA---MCADVGYTDEAFEIFEDMKS 241
L+ + + ++ +E+ E + S + TL+ C + + AF+ E M
Sbjct: 545 LQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQ--EVMAR 602
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+PD F+SM+++ + G +A MF+ + + G P+L S++ Y K+ +
Sbjct: 603 GH--KPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESW 660
Query: 302 DVVRALNRLPELGITPD 318
+ + L RL + PD
Sbjct: 661 EAEKILKRLKTSQLKPD 677
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
++ + N K R ++ + AR K D F++++ +Y G + +++ +
Sbjct: 577 RTLVISNFKCRRLEGIERAFQEVMARGHK--PDLVIFNSMLSMYAKNGMYRKAGEMFDSI 634
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G+ P++ITYN+++D ++ W+ + I K + + L P+ +Y +++ + +
Sbjct: 635 KQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLI 694
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ + EM G++ V Y+TL+ A EA E+ M N P T+
Sbjct: 695 KEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYM-IQRNLSPMELTYRR 753
Query: 255 MI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
++ + C + + EA E+ E + +L++L AQ
Sbjct: 754 VVDSYCKAK-RFDEARGFLYEIAETDRNSDQKLLSTLTARVESAQ 797
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 123/241 (51%), Gaps = 6/241 (2%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K E+ ++T EK + P+ F +I ++ AGN++ ++ M GV + +TY
Sbjct: 227 KEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTY 286
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N+L+ K +V IY +M +GL P+ +YA L+ AYG+AR ++ L+V+ EM +
Sbjct: 287 NSLMSFETNYK---EVSKIYDQMQRSGLQPDVISYALLINAYGKARREDEALAVFEEMLD 343
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G++ + YN LL A G ++A +F+ M+ + PD ++++M++ ++
Sbjct: 344 AGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRR-DRYTPDLCSYTTMLSAYVNASDMA 402
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
AE FN + + G EPN+ +LI+ Y K D ++ + G+ + ++
Sbjct: 403 GAENFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIM 462
Query: 327 N 327
+
Sbjct: 463 D 463
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 110/231 (47%), Gaps = 7/231 (3%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
LI YG GNF V M +G PN++++ L++ GR R + I++ M +G
Sbjct: 146 LITAYGKQGNFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSSG 205
Query: 174 LSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
P+ TY +L+ + + + E+ + ++ ++ +++ ++ M G +
Sbjct: 206 PKPSAVTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYE 265
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A +IF M + + T++S+++ + +VS+ ++++M +G +P++ L
Sbjct: 266 KARQIFALM-TQRGVPKSTVTYNSLMSFETNYKEVSK---IYDQMQRSGLQPDVISYALL 321
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
I YGKA+R D+ + + + G+ P + LL+ + E + V
Sbjct: 322 INAYGKARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQARTV 372
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 40/271 (14%)
Query: 74 PKSYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVY 131
PKS + N + KE K YD R+ + D +++ LI YG A D L V+
Sbjct: 280 PKSTVTYNSLMSFETNYKEVSKIYDQMQRS-GLQPDVISYALLINAYGKARREDEALAVF 338
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
EEM GV+P YN LLD + Q +T++K M + +P+ +Y ++L AY A
Sbjct: 339 EEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNA 398
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ + +K+ G++ +V Y L+ A D+ E +E+M+
Sbjct: 399 SDMAGAENFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLR--------- 449
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
G + N + T+++ YGK + V +
Sbjct: 450 ---------------------------GVKANQTIFTTIMDAYGKNKDFGSAVIWYKEME 482
Query: 312 ELGITPDDRFCGCLLNVM-TQTPKEELGKLV 341
+ G+ PD + LL++ T ++E ++V
Sbjct: 483 QYGVPPDQKAKNILLSLAKTADEQKEANQMV 513
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN S L++ YG ++ ++ M++ G KP+ +TY +L + + + +
Sbjct: 173 PNVVSHTALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVTYQIILKNFVEGNKFKEAEEV 232
Query: 166 YKEMTD---NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ + D + L P+ + ++ + +A E ++ M ++G+ S YN+L M
Sbjct: 233 FETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTYNSL--M 290
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ Y E +I++ M+ S QPD +++ +I + EA A+F EML+AG P
Sbjct: 291 SFETNY-KEVSKIYDQMQRS-GLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRP 348
Query: 283 NLFVLTSLIQCY---GKAQRTDDVVRALNR 309
L+ + G ++ V +++ R
Sbjct: 349 THKAYNILLDAFAISGMVEQARTVFKSMRR 378
>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 121/236 (51%), Gaps = 7/236 (2%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++T++++YG AG F ++++ M+ GV N++TYN ++ G++
Sbjct: 364 KMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHD 423
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ + +A + ++ +++ G+++ LY T++
Sbjct: 424 KATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTMI 483
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K QPD+ + + ITI + GKV EA +F + +AG
Sbjct: 484 VAYQKAGLVAHAKRLLNELK-----QPDNVSRETAITILARAGKVDEAMWVFRQAFDAGE 538
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
++ V +I + + ++ VV ++ E+G PD +LN + K E
Sbjct: 539 VKDISVFGCIIDIFSRERKYAHVVEVFEKMREVGHFPDSNVIALVLNAFGKLRKFE 594
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 109/210 (51%), Gaps = 5/210 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++STL+ +Y F ++++ EM + ++ T N ++D G+ + + + M
Sbjct: 303 SYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADCFFWGM 362
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+ PN +Y ++LR YG A + + ++ M+ KG+ +V YNT++++
Sbjct: 363 RKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEH 422
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D+A + ++M+ S QP++ T+S++I+I GK+ A +F+++ +G + + + +
Sbjct: 423 DKATNLIQEMQ-SRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQT 481
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+I Y KA R LN L + PD+
Sbjct: 482 MIVAYQKAGLVAHAKRLLNELKQ----PDN 507
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 103/209 (49%), Gaps = 2/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S LI+L ++ ++++ +K G + P++I N ++ G+AK + + + +EM
Sbjct: 233 YSNLIELSRKLCDYSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEM 292
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
DNG++P+ +Y++LL Y + + +S++ EM E + +T N ++ + +
Sbjct: 293 RDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMI 352
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA F M+ +P+ ++++++ + G EA +F+ M G N+ +
Sbjct: 353 KEADCFFWGMRKM-GIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNT 411
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
+I YGK+ D + + GI P+
Sbjct: 412 MISIYGKSLEHDKATNLIQEMQSRGIQPN 440
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 5/213 (2%)
Query: 141 PNMITYNNLLDTMGRAKRPWQV-KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
P++ YN ++ + RAK+ WQ+ ++ EM GLSP+ TY++L+ + + + +
Sbjct: 158 PSLNVYNVVIRNVLRAKQ-WQLAHGLFDEMLQKGLSPDKYTYSTLITHFSKQGLFDSSFF 216
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
++M+ + + LY+ L+ + + +A IF +K S N PD + MI++
Sbjct: 217 WLQQMERDNVSGDLVLYSNLIELSRKLCDYSKAISIFNALKGSGNIVPDLIACNMMISVY 276
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
EA + EM + G P+ ++L+ Y Q+ + V + + E+ D
Sbjct: 277 GKAKLFREARLLLQEMRDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDL 336
Query: 320 RFCGCLLNVMTQTPKEELGKLVECVEKSNSKLG 352
C +++V Q ++ K +C K+G
Sbjct: 337 TTCNIMIDVYGQL---QMIKEADCFFWGMRKMG 366
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
SP+ N Y ++R RA+ + ++ EM +KG+ Y+TL+ + G D +F
Sbjct: 157 SPSLNVYNVVIRNVLRAKQWQLAHGLFDEMLQKGLSPDKYTYSTLITHFSKQGLFDSSFF 216
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQC 293
+ M+ +N D +S++I + S+A ++FN + +G P+L +I
Sbjct: 217 WLQQME-RDNVSGDLVLYSNLIELSRKLCDYSKAISIFNALKGSGNIVPDLIACNMMISV 275
Query: 294 YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
YGKA+ + L + + G+ P LL + K
Sbjct: 276 YGKAKLFREARLLLQEMRDNGVNPSTASYSTLLAIYVDNQK 316
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 48/228 (21%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R NE + D + T I + AG D + V+ + G ++ + ++D
Sbjct: 493 AHAKRLLNELKQPDNVSRETAITILARAGKVDEAMWVFRQAFDAGEVKDISVFGCIIDIF 552
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
R ++ V ++++M + G P+ N A +L A+G+ R E ++Y++M E+G
Sbjct: 553 SRERKYAHVVEVFEKMREVGHFPDSNVIALVLNAFGKLRKFERADALYKQMYEEG----- 607
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
C +F PD F M+ + R + E++F
Sbjct: 608 ---------C-----------VF----------PDEVHF-QMLGLYGARMDFNMVESLF- 635
Query: 274 EMLEAGFEPNL------FVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
E L++ PN+ FV+ ++ Y +A R +D R +NR+ I
Sbjct: 636 EKLDS--HPNINKKELHFVVANI---YERADRFNDASRIMNRMNHKAI 678
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 5/237 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ L++ Y AG V EM+ GV PN TY+ L+D G A+R + + KEM
Sbjct: 343 AYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEM 402
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + PN ++ +L +Y + T V REM++ G++ YN L+
Sbjct: 403 EASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCL 462
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A F+ M SE +PD+ T+++++ C C+ GK AE +F EM+E G+ P
Sbjct: 463 DHAMATFDRML-SEGIEPDTITWNTLVD-CHCKAGKHDRAEELFEEMMEKGYLPCNTTFN 520
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+I +G +R DDV L + G+ P+ L+++ ++ + +EC++
Sbjct: 521 IMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGR--FDDAIECLD 575
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 110/214 (51%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++ LI +G D + ++ M + G++P+ IT+N L+D +A + + +
Sbjct: 443 RPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEE 502
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM + G P T+ ++ ++G +D ++ M+ +G+ + Y TL+ +
Sbjct: 503 LFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYG 562
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D+A E +DMK++ +P S +++++ + RG +A + F M + G +P+L
Sbjct: 563 KSGRFDDAIECLDDMKAA-GLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSL 621
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L SLI +GK +R + L + E + PD
Sbjct: 622 LALNSLINAFGKDRRDVEAFVVLQYMKENDLKPD 655
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 5/220 (2%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T+I G G + ++EEM+ G++P YN LL +A + + EM +
Sbjct: 311 TVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERS 370
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G+ PN TY+ L+ AYG A E V +EM+ +Q + +++ +LA D G +
Sbjct: 371 GVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKT 430
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
F++ +M+ S +PD ++ +I + A A F+ ML G EP+ +L+
Sbjct: 431 FQVLREMEDS-GVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVD 489
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
C+ KA + D + E G P C N+M +
Sbjct: 490 CHCKAGKHDRAEELFEEMMEKGYLP----CNTTFNIMINS 525
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P+ + TL+ + AG D ++EEM G P T+N ++++ G +R VK
Sbjct: 477 IEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVK 536
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M GL PN TY +L+ YG++ +D + +MK G++ S T+YN LL
Sbjct: 537 NLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAY 596
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A G +D+A F M+ + +P +S+I + EA + M E +P+
Sbjct: 597 AQRGLSDQAVSAFWAMR-DDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPD 655
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL---LNVMTQT 332
+ T+L++ ++ D V + G TPD + L L M QT
Sbjct: 656 VVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALKYMKQT 707
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 83 KSPRA-SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
K+ RA S + +K Y R +K +D ++ +I + AG+ D L ++ G+
Sbjct: 246 KNNRANSSILQKIYREIDR-DKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSV 304
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
T ++ +G R + + I++EM DNGL P Y +LLR Y +A D V
Sbjct: 305 KTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVV 364
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
EM+ G+ + Y+ L+ + + A + ++M++S N QP+++ FS ++
Sbjct: 365 SEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEAS-NVQPNAYVFSRILASYRD 423
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+G+ + + EM ++G P+ LI +GK D + +R+ GI PD
Sbjct: 424 KGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPD 480
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 17/268 (6%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PNA FS ++ Y G + V EM+ GV+P+ I YN L+DT G+
Sbjct: 403 EASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCL 462
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ M G+ P+ T+ +L+ + +A + ++ EM EKG T +N +
Sbjct: 463 DHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIM 522
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ D D+ + +M+S + P++ T++++I I G+ +A ++M AG
Sbjct: 523 INSFGDQERWDDVKNLLTNMRS-QGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAG 581
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+P+ + +L+ Y + +D V A + + G+ P L+N GK
Sbjct: 582 LKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINA--------FGK 633
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEGD 367
VE +VV ++E D++ D
Sbjct: 634 DRRDVE------AFVVLQYMKENDLKPD 655
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL--SVY 201
+TYN L+ R + + M ++G + Y+ ++R+ + ++ +Y
Sbjct: 200 LTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIY 259
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
RE+ +++ V L+N ++ A G D+A E ++ S + + + + +C
Sbjct: 260 REIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNC 319
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ EAEA+F EM + G +P +L++ Y KA D ++ + G+ P+++
Sbjct: 320 -GRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQT 378
Query: 322 CGCLLNVMTQTPKEELGKLV-ECVEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSI 379
L++ + E ++V + +E SN + YV +L +G+++K L
Sbjct: 379 YSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREME 438
Query: 380 SKDVK--KAYCNCLIDLCVNLNLLENA 404
V+ + + N LID N L++A
Sbjct: 439 DSGVRPDRIFYNVLIDTFGKFNCLDHA 465
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 14/335 (4%)
Query: 86 RASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RA+ L E S R + + D + TLI ++ AG D L++Y++M+ + P+
Sbjct: 435 RANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTF 494
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY+ +++ +G+A ++ EM D G PN TY ++ +AR L +YR+M
Sbjct: 495 TYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDM 554
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ G Q Y+ ++ + G+ +EA IF +MK +N PD + ++ + G
Sbjct: 555 QNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMK-RKNWVPDEPVYGLLVDLWGKVGN 613
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
V ++ + ML AG PN+ SL+ + + R D L + LG+ P +
Sbjct: 614 VEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTL 673
Query: 325 LLNVMTQTPKE-ELGKLVECVEKSNSKLGYVVKLLLEEQDIEG-------DFKKEATELF 376
LL+ T+ ++G E + + G+ + L G D + +L
Sbjct: 674 LLSCCTEARSSFDMGFCGELMAVT----GHPAHMFLLSMPAAGPDGQNVRDHVSKFLDLM 729
Query: 377 NSISKDVKKAYCNCLIDLCVNLNLLENACKLLELG 411
+S ++ K+ + ++D L E A + E+
Sbjct: 730 HSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 764
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 110/229 (48%), Gaps = 1/229 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R ++ D + ++T++ + G A F + EM G +PN++TYN L+ + GRA
Sbjct: 380 RQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYL 439
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++ M + G P+ TY +L+ + +A + + L +Y++M+E + Y+ +
Sbjct: 440 NEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVI 499
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G+ A ++F +M + C P+ T++ MI + + A ++ +M AG
Sbjct: 500 INCLGKAGHLTSAHKLFCEM-VDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAG 558
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
F+P+ + +++ G ++ + PD+ G L+++
Sbjct: 559 FQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDL 607
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A F +K + D T+++M+ I + + EM+ G +PN+ LI
Sbjct: 371 ALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLI 430
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
YG+A ++ V +R+ E G P DR C L
Sbjct: 431 HSYGRANYLNEAVSVFDRMQEAGCQP-DRVTYCTL 464
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%)
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ CQP+ T++ +I ++EA ++F+ M EAG +P+ +LI + KA D
Sbjct: 417 DGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDV 476
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVM 329
+ ++ E ++PD ++N +
Sbjct: 477 ALHMYQKMQEAHLSPDTFTYSVIINCL 503
>gi|145356823|ref|XP_001422624.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582867|gb|ABP00941.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 744
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 7/223 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
A++T+IK G A ++ L YE M K G KPN IT++ L++ +G+AK+ + I+ E
Sbjct: 80 AYTTVIKACGKASQWEKALKAYEMMTKLHGAKPNTITFSALINALGKAKQCDRAFQIFDE 139
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE--KGMQLSVTLYNTLLAMCADV 226
M D G+ PN TY++LL A RA+ + + +++++ E + +++ Y + C
Sbjct: 140 MNDRGIEPNIFTYSALLGACARAKQYQRAMDIFQDLIENHRDVEVDRITYGAAIQCCVQG 199
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D+A EIFE M +S + + T+++++ C G A+ MF M +
Sbjct: 200 RRADKAIEIFERMLAS-GIKGNIITYNAVLMACEKSGDSDGAQEMFERMSAEQVPMDRAT 258
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++I +A++ V+ + +PE G+TPD G + NV+
Sbjct: 259 FHAMIGACDRARQLSKVMDYYHMMPERGVTPD---AGTVSNVL 298
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
FS LI G A D +++EM G++PN+ TY+ LL RAK+ + I++++
Sbjct: 117 FSALINALGKAKQCDRAFQIFDEMNDRGIEPNIFTYSALLGACARAKQYQRAMDIFQDLI 176
Query: 171 DN--GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+N + + TY + ++ + R + + ++ M G++ ++ YN +L C G
Sbjct: 177 ENHRDVEVDRITYGAAIQCCVQGRRADKAIEIFERMLASGIKGNIITYNAVLMACEKSGD 236
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+D A E+FE M S+E D TF +MI C ++S+ ++ M E G P+ ++
Sbjct: 237 SDGAQEMFERM-SAEQVPMDRATFHAMIGACDRARQLSKVMDYYHMMPERGVTPDAGTVS 295
Query: 289 SLIQCYGKAQ 298
+++ A+
Sbjct: 296 NVLMACSNAK 305
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
R ED +V R +++ + Y T++ C ++A + +E M +P+
Sbjct: 54 ARVEDAEDAAAVERVLRQSVFKPGAPAYTTVIKACGKASQWEKALKAYEMMTKLHGAKPN 113
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA---QRTDDVVR 305
+ TFS++I + A +F+EM + G EPN+F ++L+ +A QR D+ +
Sbjct: 114 TITFSALINALGKAKQCDRAFQIFDEMNDRGIEPNIFTYSALLGACARAKQYQRAMDIFQ 173
Query: 306 AL---NRLPELGITPDDRFC-GCLLNVMTQTPKEELGKLVECVEK------SNSKLGYVV 355
L +R E+ DR G + Q + + K +E E+ + + Y
Sbjct: 174 DLIENHRDVEV-----DRITYGAAIQCCVQGRRAD--KAIEIFERMLASGIKGNIITYNA 226
Query: 356 KLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLC 395
L+ E+ + D +E E ++ + +A + +I C
Sbjct: 227 VLMACEKSGDSDGAQEMFERMSAEQVPMDRATFHAMIGAC 266
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D + ++E M A G+K N+ITYN +L ++ + +++ M+ + + T+ ++
Sbjct: 203 DKAIEIFERMLASGIKGNIITYNAVLMACEKSGDSDGAQEMFERMSAEQVPMDRATFHAM 262
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ A RAR + Y M E+G+ + +L C++ A +++ D ++ +
Sbjct: 263 IGACDRARQLSKVMDYYHMMPERGVTPDAGTVSNVLMACSNAKDPLTAIKVYHDARAKFD 322
Query: 245 CQPDSWTFSSMITICSCRGK 264
F+++I RGK
Sbjct: 323 VHRTPGMFNNLIGALH-RGK 341
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 36/175 (20%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
+G+ DG ++E M A V + T++ ++ RA++ +V Y M + G++P+ T
Sbjct: 234 SGDSDGAQEMFERMSAEQVPMDRATFHAMIGACDRARQLSKVMDYYHMMPERGVTPDAGT 293
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEK-------GM------------------------ 209
+++L A A+ + VY + + K GM
Sbjct: 294 VSNVLMACSNAKDPLTAIKVYHDARAKFDVHRTPGMFNNLIGALHRGKRYDLVYEQLFHD 353
Query: 210 -----QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
LSV+ Y L+ C G +++F++FE+ K DS+ ++ + C
Sbjct: 354 SMTQSALSVSTYVHLMMACERFGNWEKSFQLFEEFKRHSPSSVDSYVWTRVFYAC 408
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ L+ +YG G + EM+A G+ PN++TYN L+ RA + +
Sbjct: 178 PNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAAL 237
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K + GL P+ TY +L+ A+ RA E L + EM++ ++ YN L+ +
Sbjct: 238 KKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGR 297
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ D+ ++F+ M+ +NC PD T++S++ G ++E +F EM AG+ P +
Sbjct: 298 MEKLDDMMKVFKFMQ-EKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVD 356
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
LI+CYG+ D V L G+ P
Sbjct: 357 TFNILIECYGRCGYVDYSVDIYKGLLRTGLQP 388
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 137/256 (53%), Gaps = 3/256 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+++ ++E + +D A+++LI + A FD + ++E M+ G + N +TYN +LD G
Sbjct: 61 FESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYG 120
Query: 155 RAKRPW-QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ W +++++++EM D +SP+ TY +++ A + + ++ L +++EMKE G +
Sbjct: 121 KRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNR 180
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
YN LL + G EA E+ +M+++ P+ T++ +I + G EA A+
Sbjct: 181 VTYNALLDVYGKGGMHKEASELLVEMEAA-GISPNIVTYNELIAAYARAGLCDEAAALKK 239
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
+L G P+ F +LI + +A+R + + + + TP+ L+++ +
Sbjct: 240 SLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRME 299
Query: 334 K-EELGKLVECVEKSN 348
K +++ K+ + +++ N
Sbjct: 300 KLDDMMKVFKFMQEKN 315
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI + A ++ L + EM+ PN++TYN L+D GR ++ + ++
Sbjct: 249 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVF 308
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + +P+ T+ SLL+++G + +V+REMK G V +N L+
Sbjct: 309 KFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRC 368
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY D + +I++ + + QP TF++++ + G+ + E + EM EAG + +
Sbjct: 369 GYVDYSVDIYKGLLRT-GLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDAC 427
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
LI Y + + + + ++ L + P
Sbjct: 428 HAGLIHSYANSGQFFQLRKYIDELEKSAKQP 458
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 112/247 (45%), Gaps = 37/247 (14%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+ LI+ YG G D +++Y+ + G++P + T+ L+ ++ R R Q + + +E
Sbjct: 356 DTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQE 415
Query: 169 MTDNGLSPNWNTYASLLRAYGRA------RYGEDTLS----------------------- 199
M + GL + +A L+ +Y + R D L
Sbjct: 416 MAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCC 475
Query: 200 -------VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ + G + ++N +++MCA G+ + A ++ E+++ ++ +PD T+
Sbjct: 476 MDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQ-LKPDGVTY 534
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ ++++ G +AE + +EM AG PNL +L+ Y K R DD R +
Sbjct: 535 NCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA 594
Query: 313 LGITPDD 319
+ PD+
Sbjct: 595 ARVRPDN 601
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+K +G G NV+ EMK G P + T+N L++ GR IY
Sbjct: 319 DLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIY 378
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K + GL P T+A+L+ + R + V +EM E G+QLS + L+ A+
Sbjct: 379 KGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANS 438
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV-SEAEAMFNEMLEAGFEPNLF 285
G + + ++++ S QP S + C+ + +EA+ N++ + G P++
Sbjct: 439 GQFFQLRKYIDELEKSAK-QPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIK 497
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
V ++I K + V+ L + + + PD CL+++
Sbjct: 498 VFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSM 540
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 114 LIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKR-PWQVKTIYKEMTD 171
+K G G + L V+E + K K + ++L +G ++ P ++ D
Sbjct: 8 FVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQD 67
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT-D 230
S + Y SL+ RAR ++ ++++ M+ +G + + YN +L + G + D
Sbjct: 68 ESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWD 127
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+F++MK E PD +T+++MIT C EA +F EM EAG PN +L
Sbjct: 128 RIQSLFQEMKDLE-ISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 186
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ YGK + L + GI+P+
Sbjct: 187 LDVYGKGGMHKEASELLVEMEAAGISPN 214
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I + G + + + EE++ +KP+ +TYN L+ GR + + +
Sbjct: 495 DIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVM 554
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G +PN TY +LL +Y + +D V+ +M ++ +NTL+ + +
Sbjct: 555 SEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSL 614
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G EA + E M + CQP TF +++
Sbjct: 615 GLYKEALSVIEYM-TEHGCQPTQITFKALL 643
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTI--YKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
G P++ +N ++ AKR W + + +E+ L P+ TY L+ YGR
Sbjct: 491 GHSPDIKVFNAMISMC--AKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYH 548
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
V EM+ G ++ YNTLL G D+A +F DM ++ +PD++TF+++
Sbjct: 549 KAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAAR-VRPDNFTFNTL 607
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+ S G EA ++ M E G +P +L+ Y
Sbjct: 608 VGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
RA KL E+ R + + D ++ L+ +YG G + V EM+ G PN+IT
Sbjct: 514 RAVKLLEE-----IRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLIT 568
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN LL + + R ++ +M + P+ T+ +L+ +Y ++ LSV M
Sbjct: 569 YNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMT 628
Query: 206 EKGMQLSVTLYNTLL 220
E G Q + + LL
Sbjct: 629 EHGCQPTQITFKALL 643
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TL+ Y G D V+ +M A V+P+ T+N L+ + + ++
Sbjct: 564 PNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSV 623
Query: 166 YKEMTDNGLSPNWNTYASLLRAY 188
+ MT++G P T+ +LL Y
Sbjct: 624 IEYMTEHGCQPTQITFKALLDGY 646
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 186/420 (44%), Gaps = 23/420 (5%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R D + ++++++LY +F + +Y+ +K G++P+ TYN L+ R RP +
Sbjct: 906 FRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGC 965
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM GL P +TY SL+ A+G+ + D ++ E+ KG +L + Y+ ++ +
Sbjct: 966 SLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIY 1025
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +A ++ MK + +P T ++ G+ EAE + + E G +
Sbjct: 1026 RNSGNHSKAEKLLSMMKDA-GVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLS 1084
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
+S+I Y K + ++ L + + G+ PD R C + + + + L++
Sbjct: 1085 TLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQ 1144
Query: 343 CVEKSNSKLGYVVKLLLEEQD---IEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLN 399
++ S L +L+ E D +E D E+ ++ + + N L DL
Sbjct: 1145 ALQDSGFDLP--SRLITERSDSLVLEVD---HCLEMLETMEDNAAFNFVNALEDLLWAFE 1199
Query: 400 LLENACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESG 458
L A + L + +Y D+ + W + LS GAAL A +L+
Sbjct: 1200 LRATASWVFRLAVKRSIYCHDVFRVAEQDWGADFRKLSGGAALDA----------SLQGY 1249
Query: 459 EEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLE 518
P + + TG +Y+ L + ++ L E+ +PF + G + + + WL+
Sbjct: 1250 PASPKSVVLITGTA--EYNMVSLDNTLKACLWEMGSPFLPCRTRSGLLVAKAHSLRMWLK 1307
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 1/230 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R R D ++TLI N + + V+++M+A +P++ TYN ++ GR
Sbjct: 273 VRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGF 332
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++KE+ G P+ TY SLL A+ R + + EM + G YNT
Sbjct: 333 SGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNT 392
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M G A +++ DMK S PD+ T++ +I K+ EA + +EML
Sbjct: 393 IIHMYGKQGQHGLALQLYRDMKLSGRT-PDAITYTVLIDSLGKANKMVEAANVMSEMLNI 451
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
G +P L ++LI Y +A + + + + GI PD +L+V
Sbjct: 452 GVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDV 501
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+ + GN D + EM +G + +TYN ++ G+ + +Y
Sbjct: 351 DAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLY 410
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M +G +P+ TY L+ + G+A + +V EM G++ ++ Y+ L+ A
Sbjct: 411 RDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARA 470
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA E F+ M+ S +PD +S M+ + + ++A ++ EM+ G P+ V
Sbjct: 471 GQRLEAEETFDCMRRS-GIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTV 529
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPEL-GITP 317
++++ G+ + +D+ R + + E+ G+ P
Sbjct: 530 YGAMLRNLGRENKVEDIQRIIRDMEEVCGMNP 561
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 7/257 (2%)
Query: 107 DPNAFSTLIKLYGTAGNF--DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
D +F+TLI AG + + + E++ G++P++ITYN L+ R +
Sbjct: 244 DLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVK 303
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M + P+ TY +++ YGR + +++E++ KG YN+LL A
Sbjct: 304 VFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFA 363
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D+ EI +M + D T++++I + +G+ A ++ +M +G P+
Sbjct: 364 REGNVDKVKEICNEMVQMGFIR-DEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDA 422
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGKLVEC 343
T LI GKA + + ++ + +G+ P R + + + E + +C
Sbjct: 423 ITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDC 482
Query: 344 VEKSN---SKLGYVVKL 357
+ +S +L Y V L
Sbjct: 483 MRRSGIRPDQLAYSVML 499
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q + ++ M +G SP ++ LL+A E+ V +E+++ G Q+S + +L
Sbjct: 788 QARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLIL 847
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAG 279
A V EA +I++ MK++ P + MI + C+GK V + EAM EM EAG
Sbjct: 848 DAFARVSNIAEAKKIYQGMKAA-GYFPTMHLYRIMIGLL-CKGKRVRDVEAMVTEMEEAG 905
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
F P+L + S+++ Y V+ R+ E G+ PD+ L+ + + + E G
Sbjct: 906 FRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEG 964
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 101/258 (39%), Gaps = 36/258 (13%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL---------------- 149
+D ++ LI+ Y +G ++ V+ M G P + + N L
Sbjct: 768 VDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVV 827
Query: 150 -------------------LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
LD R + K IY+ M G P + Y ++ +
Sbjct: 828 TQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCK 887
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ D ++ EM+E G + ++++N++L + + + +I++ +K + QPD
Sbjct: 888 GKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIK-EDGLQPDED 946
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++++I + + E ++ +EM G EP L SLI +GK Q D L
Sbjct: 947 TYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEEL 1006
Query: 311 PELGITPDDRFCGCLLNV 328
G D F ++ +
Sbjct: 1007 LSKGSKLDRSFYHIMMKI 1024
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 41/257 (15%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRP 159
+ K ++ P F ++K G N+ L V+E + PN +L +G+A +
Sbjct: 134 DSKVQMTPTDFCFVVKWVGQE-NWQRALEVFEWLNLRHWYSPNARMLATILAVLGKANQE 192
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGR-ARYG--EDTLSVYR-------------- 202
I+ ++ + Y +++ Y R R+ + L + R
Sbjct: 193 ALAVEIFIR-AESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTL 251
Query: 203 --------------------EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
E++ G++ + YNTL++ C+ +EA ++F+DM+ +
Sbjct: 252 INARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDME-A 310
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
CQPD WT+++MI++ G +AE +F E+ G+ P+ SL+ + + D
Sbjct: 311 HYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDK 370
Query: 303 VVRALNRLPELGITPDD 319
V N + ++G D+
Sbjct: 371 VKEICNEMVQMGFIRDE 387
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 40/284 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW------ 160
D +A++ LI A F + V+ M A GV P ++TYN +L + PW
Sbjct: 175 DASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLAL 234
Query: 161 ------------------------------QVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ ++ EM G P+ T SLL YG+
Sbjct: 235 VDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGK 294
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
AR ++ + V +EM++ G SV YN+L++ G +EA ++ E+M+ + +PD
Sbjct: 295 ARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEME-VKGIEPDVI 353
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++++++ GK+ A +NEML G +PNL +LI+ +G + +++ + +
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEI 413
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV 354
G PD LL V Q L V V K K GYV
Sbjct: 414 RSAGFVPDVVTWNTLLAVFGQN---GLDTEVSGVFKEMKKSGYV 454
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + +D ++TLI + V++EM+A G +P+ +T N+LLD G+A+R
Sbjct: 239 RKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRY 298
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + KEM G P+ TY SL+ +Y + E+ + EM+ KG++ V Y TL
Sbjct: 299 DEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTL 358
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++ G D A + +M + C+P+ T++++I + RGK E +F+E+ AG
Sbjct: 359 VSGLDRAGKIDAAIGTYNEMLRN-GCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAG 417
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F P++ +L+ +G+ +V + + G P+
Sbjct: 418 FVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPE 456
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 117/224 (52%), Gaps = 10/224 (4%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LIKL+G G F + V++E+++ G P+++T+N LL G+ +V +
Sbjct: 385 PNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGV 444
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM +G P +TY SL+ +Y R + + +Y+ M E G+ ++ YN +L+ A
Sbjct: 445 FKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALAR 504
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A ++F +M++ ++ +PD ++SS++ + K+ + +++ ++ E +
Sbjct: 505 GGRWEQAEKLFAEMENLDS-RPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNG 563
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++ +L+ K D +A L R C +NV+
Sbjct: 564 LVKTLVLVNSKVNNLSDTEKAFLELRR-------RRCSLDINVL 600
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 5/215 (2%)
Query: 90 LKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L E++ + E I+P+ ++TL+ AG D + Y EM G KPN+ TYN
Sbjct: 332 LLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYN 391
Query: 148 NLLDTMG-RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
L+ G R K P ++ ++ E+ G P+ T+ +LL +G+ + V++EMK+
Sbjct: 392 ALIKLHGVRGKFP-EMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKK 450
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G Y +L++ + G D+A EI++ M + PD T++++++ + G+
Sbjct: 451 SGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEA-GIHPDISTYNAVLSALARGGRWE 509
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+AE +F EM P+ +SL+ Y A++ D
Sbjct: 510 QAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLD 544
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 176 PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT-DEAFE 234
P+ + Y +L+ A RA D ++V+R M G+ ++ YN +L + + + E
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+ + M+ + D +T++++I+ C R EA +F+EM AGFEP+ L SL+ Y
Sbjct: 234 LVDSMRK-DGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVY 292
Query: 295 GKAQRTDDVVRALNRLPELGITP 317
GKA+R D+ + L + + G P
Sbjct: 293 GKARRYDEAIGVLKEMEQGGCPP 315
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + +LI Y G FD + +Y+ M G+ P++ TYN +L + R R Q + ++ E
Sbjct: 458 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAE 517
Query: 169 MTDNGLSPNWNTYASLLRAYGRAR------------YGE--------------------- 195
M + P+ +Y+SLL AY A+ Y E
Sbjct: 518 MENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNN 577
Query: 196 --DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
DT + E++ + L + + N ++++ G + EI MK S + + T++
Sbjct: 578 LSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKES-SINLSTATYN 636
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
S++ + S G + E + E+ + P+ + ++I YG+ + + R + +
Sbjct: 637 SLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCS 696
Query: 314 GITPD 318
G+ PD
Sbjct: 697 GLVPD 701
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 114/256 (44%), Gaps = 36/256 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT-- 164
D + ++ ++ G ++ ++ EM+ + +P+ ++Y++LL AK+ ++K+
Sbjct: 491 DISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLS 550
Query: 165 --IYKEMTD--NGL-----------------------------SPNWNTYASLLRAYGRA 191
IY E + NGL S + N +++ YG+
Sbjct: 551 EDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKN 610
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ + MKE + LS YN+L+ M + +G ++ I ++KSS +PD ++
Sbjct: 611 GMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSR-ARPDRYS 669
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++MI +G++ EA +F+EM +G P++ ++ Y ++ + + +
Sbjct: 670 YNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMV 729
Query: 312 ELGITPDDRFCGCLLN 327
G P++R +L
Sbjct: 730 THGCKPNERTYNTILQ 745
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 1/216 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D ++TL+ ++G G V++EMK G P TY +L+ + R
Sbjct: 414 RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLF 473
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q IYK M + G+ P+ +TY ++L A R E ++ EM+ + Y++L
Sbjct: 474 DQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSL 533
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L A+ D+ + ED+ +E + + +++ + S +S+ E F E+
Sbjct: 534 LHAYANAKKLDKMKSLSEDIY-AERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRR 592
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
++ VL ++I YGK V L+ + E I
Sbjct: 593 CSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSI 628
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 110/249 (44%), Gaps = 7/249 (2%)
Query: 29 RDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRAS 88
R D LS+ S + L + +S + +++ + +G K+ + VN K S
Sbjct: 524 RPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLV----KTLVLVNSKVNNLS 579
Query: 89 KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
++ + R R + +D N + +I +YG G + MK + + TYN+
Sbjct: 580 DTEKAFLELRRR--RCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNS 637
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L+ R + + I E+ + P+ +Y +++ AYGR ++ ++ EMK G
Sbjct: 638 LMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSG 697
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ + YN + +EA ++ M + C+P+ T+++++ G++++
Sbjct: 698 LVPDIVTYNIFVKSYVANSMFEEAIDLVRYM-VTHGCKPNERTYNTILQEYCSHGRIADG 756
Query: 269 EAMFNEMLE 277
++ + + E
Sbjct: 757 KSFISNLPE 765
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 2/220 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN + P S L+K G A L+V+ + K KP TYN+++ + + +
Sbjct: 153 VRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQ 212
Query: 159 PWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V +Y EM + G P+ TY++L+ +Y + + + ++ EMK+ MQ + +Y
Sbjct: 213 HEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYT 272
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL + VG ++A ++FE+MK + C P +T++ +I G+V EA + +ML
Sbjct: 273 TLLGIYFKVGKVEKALDLFEEMKRA-GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR 331
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P++ L +L+ GK R +++ + + TP
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI Y G D + +++EMK ++P Y LL + + + ++
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G SP TY L++ G+A ++ Y++M G+ V N L+ + V
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +E +F +M C P +++++I + + VSE + F++M P+ F
Sbjct: 352 GRVEELTNVFSEM-GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y K R + + L + E G P L+N + + + E
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 9/243 (3%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM---KAIGVKPNMITYNNLLDTMGR 155
+ ++ D + + TLI+ A + +E+ + V P +++ L+ +GR
Sbjct: 117 GKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLS--ELVKALGR 174
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
AK + +++ + P +TY S++ + E VY EM +G T+
Sbjct: 175 AKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTI 234
Query: 216 -YNTLLAMCADVGYTDEAFEIFEDMKSSENC-QPDSWTFSSMITICSCRGKVSEAEAMFN 273
Y+ L++ +G D A +F++MK +NC QP +++++ I GKV +A +F
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMK--DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
EM AG P ++ T LI+ GKA R D+ + G+TPD F L+N++ +
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVG 352
Query: 334 KEE 336
+ E
Sbjct: 353 RVE 355
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A ++ +++E+K + Y ++ G+ + + ++
Sbjct: 444 PAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM + G P+ Y +L+ +A + S+ R+M+E G + + +N +L A G
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTG 563
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+FE +K S +PD T+++++ + G EA M EM + GFE +
Sbjct: 564 VPRRAIEMFETIKHS-GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITY 622
Query: 288 TSLIQCYGKAQRTDDVVRAL 307
+S++ G D V +
Sbjct: 623 SSILDAVGNVDHEKDDVSSF 642
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ F S LI Y + L + EEM G P Y +L++ +G+AKR
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAD 464
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++KE+ +N + + YA +++ +G+ + + ++ EMK +G V YN L++
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +EA + M+ + C+ D + + ++ + G A MF + +G +P+
Sbjct: 525 VKAGMINEANSLLRKMEEN-GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ C+ A ++ R + + + G D
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 5/243 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-RPWQVKTIYKEM 169
+ L+ + G G + NV+ EM P +++YN ++ + +K +V + + +M
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ +SP+ TY+ L+ Y + E L + EM EKG Y +L+
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ A E+F+++K + S ++ MI GK+SEA +FNEM G P+++ +
Sbjct: 461 EAADELFKELKENFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT--PKEELGKLVECVEKS 347
L+ KA ++ L ++ E G D +LN +T P+ + ++ E ++ S
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAI-EMFETIKHS 578
Query: 348 NSK 350
K
Sbjct: 579 GIK 581
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ ++ +IK +G G ++++ EMK G P++ YN L+ M +A + ++
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M +NG + N++ +L + R + ++ +K G++ YNTLL A
Sbjct: 537 LRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAH 596
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G +EA + +MK + + D+ T+SS++
Sbjct: 597 AGMFEEAARMMREMK-DKGFEYDAITYSSIL 626
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 71 GSSPKSYIW--VNPKSPRASKLKEKSYDTRARNEKW-RIDPNAFSTLIKLYGTAGNFDGC 127
GS P Y + + +A + E + R E R D N+ + ++ + G
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ ++E +K G+KP+ +TYN LL A + + +EM D G + TY+S+L A
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Query: 188 YGRARYGEDTLSVY 201
G + +D +S +
Sbjct: 629 VGNVDHEKDDVSSF 642
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 2/220 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN + P S L+K G A L+V+ + K KP TYN+++ + + +
Sbjct: 153 VRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQ 212
Query: 159 PWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V +Y EM + G P+ TY++L+ +Y + + + ++ EMK+ MQ + +Y
Sbjct: 213 HEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYT 272
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL + VG ++A ++FE+MK + C P +T++ +I G+V EA + +ML
Sbjct: 273 TLLGIYFKVGKVEKALDLFEEMKRA-GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR 331
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P++ L +L+ GK R +++ + + TP
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI Y G D + +++EMK ++P Y LL + + + ++
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G SP TY L++ G+A ++ Y++M G+ V N L+ + V
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +E +F +M C P +++++I + + VSE + F++M P+ F
Sbjct: 352 GRVEELTNVFSEM-GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y K R + + L + E G P L+N + + + E
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 9/243 (3%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM---KAIGVKPNMITYNNLLDTMGR 155
+ ++ D + + TLI+ A + +E+ + V P +++ L+ +GR
Sbjct: 117 GKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLS--ELVKALGR 174
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
AK + +++ + P +TY S++ + E VY EM +G T+
Sbjct: 175 AKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTI 234
Query: 216 -YNTLLAMCADVGYTDEAFEIFEDMKSSENC-QPDSWTFSSMITICSCRGKVSEAEAMFN 273
Y+ L++ +G D A +F++MK +NC QP +++++ I GKV +A +F
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMK--DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
EM AG P ++ T LI+ GKA R D+ + G+TPD F L+N++ +
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVG 352
Query: 334 KEE 336
+ E
Sbjct: 353 RVE 355
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A ++ +++E+K + Y ++ G+ + + ++
Sbjct: 444 PAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM + G P+ Y +L+ +A + S+ R+M+E G + + +N +L A G
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTG 563
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+FE +K S +PD T+++++ + G EA M EM + GFE +
Sbjct: 564 VPRRAIEMFETIKHS-GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITY 622
Query: 288 TSLIQCYGKAQRTDDVVRAL 307
+S++ G D V +
Sbjct: 623 SSILDAVGNVDHEKDDVSSF 642
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ F S LI Y + L + EEM G P Y +L++ +G+AKR
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++KE+ +N + + YA +++ +G+ + + ++ EMK +G V YN L++
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +EA + M+ + C+ D + + ++ + G A MF + +G +P+
Sbjct: 525 VKAGMINEANSLLRKMEEN-GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ C+ A ++ R + + + G D
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 5/243 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-RPWQVKTIYKEM 169
+ L+ + G G + NV+ EM P +++YN ++ + +K +V + + +M
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ +SP+ TY+ L+ Y + E L + EM EKG Y +L+
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ A E+F+++K + S ++ MI GK+SEA +FNEM G P+++ +
Sbjct: 461 EAANELFKELKENFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT--PKEELGKLVECVEKS 347
L+ KA ++ L ++ E G D +LN +T P+ + ++ E ++ S
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAI-EMFETIKHS 578
Query: 348 NSK 350
K
Sbjct: 579 GIK 581
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ ++ +IK +G G ++++ EMK G P++ YN L+ M +A + ++
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M +NG + N++ +L + R + ++ +K G++ YNTLL A
Sbjct: 537 LRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAH 596
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G +EA + +MK + + D+ T+SS++
Sbjct: 597 AGMFEEAARMMREMK-DKGFEYDAITYSSIL 626
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 71 GSSPKSYIW--VNPKSPRASKLKEKSYDTRARNEKW-RIDPNAFSTLIKLYGTAGNFDGC 127
GS P Y + + +A + E + R E R D N+ + ++ + G
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ ++E +K G+KP+ +TYN LL A + + +EM D G + TY+S+L A
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Query: 188 YGRARYGEDTLSVY 201
G + +D +S +
Sbjct: 629 VGNVDHEKDDVSSF 642
>gi|449018641|dbj|BAM82043.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 805
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 23/306 (7%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N + D + T++ + + V + M+ G++PN Y +L+D RA P
Sbjct: 496 QNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLP 555
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q +++++++ GL + +LL A+ RA+ E + EM+ G++ +NTL
Sbjct: 556 DQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEMRSAGVRGDRITFNTL 615
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ A D+A++ FE MK S N D+ T++++I CS G A A+FNEM +A
Sbjct: 616 ITAAARAREFDKAWKAFETMKKS-NISADATTYNALIDACSKSGMTELAFALFNEMRQAH 674
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+P +F +LI K Q + L + G+ PD LN++
Sbjct: 675 LQPTIFTFNALIGACTKLQDMRRATQVLMLMHGFGVYPDT----FTLNIL---------- 720
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI-DLCVNL 398
L C N Y + L+ E E +++ L +SI ++ C+ D C L
Sbjct: 721 LTACAR--NEDFDYAISLVRE---FETNYRVRLDRLGSSIVTNLCIKACDSQSRDRC--L 773
Query: 399 NLLENA 404
LLE A
Sbjct: 774 RLLEAA 779
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 7/205 (3%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
++ ++ +Y+ L+ +G+ Q ++ +M NG++PN T+++L A + + +
Sbjct: 393 IEIDVASYSILISCLGKCGASAQAIEMFHKMIRNGVAPNAFTFSALFGALTDGAFFDQAM 452
Query: 199 SVYREMKEK-GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+++ ++ +L+V +YN +L G D A ++ M+ + N QPD T+ +++
Sbjct: 453 RLFQMIRASYPNELNVVVYNAVLKYVGRAGRIDAALDLLGQMEQNRNVQPDIVTYGTILD 512
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
IC+ + VS A A+ + M + G PN F SLI +A D +L G+
Sbjct: 513 ICAKKQDVSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEY 572
Query: 318 DDRFCGCLLNVMTQTPKEELGKLVE 342
D C LL + K+VE
Sbjct: 573 DLFICNALLGAFAR------AKMVE 591
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 3/200 (1%)
Query: 94 SYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+Y R K + PN F ++LI AG D +++ +++A G++ ++ N LL
Sbjct: 523 AYAVLDRMRKRGMRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNALLG 582
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
RAK + ++EM G+ + T+ +L+ A RAR + + MK+ +
Sbjct: 583 AFARAKMVERAFQAFEEMRSAGVRGDRITFNTLITAAARAREFDKAWKAFETMKKSNISA 642
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
T YN L+ C+ G T+ AF +F +M+ + + QP +TF+++I C+ + A +
Sbjct: 643 DATTYNALIDACSKSGMTELAFALFNEMRQA-HLQPTIFTFNALIGACTKLQDMRRATQV 701
Query: 272 FNEMLEAGFEPNLFVLTSLI 291
M G P+ F L L+
Sbjct: 702 LMLMHGFGVYPDTFTLNILL 721
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 2/174 (1%)
Query: 88 SKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
+K+ E+++ R+ R D F+TLI A FD +E MK + + T
Sbjct: 587 AKMVERAFQAFEEMRSAGVRGDRITFNTLITAAARAREFDKAWKAFETMKKSNISADATT 646
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN L+D ++ ++ EM L P T+ +L+ A + + V M
Sbjct: 647 YNALIDACSKSGMTELAFALFNEMRQAHLQPTIFTFNALIGACTKLQDMRRATQVLMLMH 706
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
G+ N LL CA D A + + +++ + D S + +C
Sbjct: 707 GFGVYPDTFTLNILLTACARNEDFDYAISLVREFETNYRVRLDRLGSSIVTNLC 760
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 122/229 (53%), Gaps = 1/229 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FSTLI+L G ++ +++ ++KA G+ P+ + YN++++ G+AK + + +
Sbjct: 94 DLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLL 153
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + GL P+ +Y L+ AY ++ + V+ EMK KG+QL VT N ++ + +
Sbjct: 154 AEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKL 213
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLF 285
+A E+F M + Q + T+++MI + +SEA +F M + G EPN+
Sbjct: 214 EMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVI 273
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+++ +G + + +R + ++ + GI P+ L+++ +T K
Sbjct: 274 TYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGK 322
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 6/227 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMK-AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++T+IK+Y A NV+ M+ GV+PN+ITYN +L G + + + ++M
Sbjct: 239 YNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKM 298
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+ PN TY++L+ YG+ + +++ ++EKG ++ LY +++ + G
Sbjct: 299 QQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLV 358
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A + E++K QPD + I+I + K+ EA ++ EAG S
Sbjct: 359 AHAKRLLEELK-----QPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKS 413
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+IQ + + +R+ + + + E G PD LL Q + E
Sbjct: 414 MIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLE 460
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 3/192 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQV-KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
G P++ YN +L + RA R W++ + + EM + L P+ T+++L+ YGRA ED
Sbjct: 20 GYAPSIFAYNVVLKNVLRA-RQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLED 78
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ +EM+ G++ + +++TL+ + V +A +F +K+S PD ++SMI
Sbjct: 79 AMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKAS-GIAPDKVIYNSMI 137
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ EA+ + EM EAG P+ T LI Y ++Q+ + + + GI
Sbjct: 138 NLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQ 197
Query: 317 PDDRFCGCLLNV 328
D C +++V
Sbjct: 198 LDVTTCNMMIDV 209
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM + P+ T++ L+ GRA R +EM G+ P+ +++L+ G+ +
Sbjct: 50 EMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVK 109
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
S++ ++K G+ +YN+++ + + EA + +MK + PD+ ++
Sbjct: 110 DYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEA-GLMPDTVSY 168
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ +I + K EA+ +F EM G + ++ +I YGK + D
Sbjct: 169 TILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRD 218
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + A + +Y G +TY +++ R KR +++ M ++
Sbjct: 378 TAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRES 437
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G P+ T LL AYG+ R ED +Y +M+E+G L ++ +L + D EA
Sbjct: 438 GFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREA 497
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
++F +K E D + +MI I K++EA +F+EM
Sbjct: 498 EDMFAALK-LEGLDGDE-LYLTMIRIYERASKLNEASRLFSEM 538
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 111/237 (46%), Gaps = 9/237 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK+ + ++ I+PNA +STLI +YG G +D +++ ++ G + + I Y ++
Sbjct: 289 EKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSM 348
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG- 208
+ RA K + +E+ + P +T S+L +A E+ +Y E G
Sbjct: 349 IVVYERAGLVAHAKRLLEELKQPDIVPR-DTAISIL---AKAEKLEEAAKLYWRSHEAGE 404
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ SVT Y +++ + + A ++FE+M+ S PDS T ++ ++ +A
Sbjct: 405 IKESVT-YKSMIQLFVRNKRSKNAIDVFENMRES-GFLPDSETTVVLLAAYGQLRQLEDA 462
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
E ++ +M E G V +++ YG A++ + L G+ D+ + +
Sbjct: 463 EKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDELYLTMI 519
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
R +NEK ++T+I G +++G L ++ EM+ G++P+++TYN LL
Sbjct: 201 RMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIR 260
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + +++ M D G+ P+ TY+ L+ +G+ R E + EM G +T Y
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSY 320
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N LL A G EA +F M+++ C P++ T+S ++ + G+ + +F EM
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +P+ LI+ +G+ +VV + + E I PD
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 174/413 (42%), Gaps = 54/413 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+ N +S L+ L+G +G +D ++ EMK+ P+ TYN L++ G +V T++
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + + P+ TY ++ A G+ ED + + M + S Y ++
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA F M P TF S++ + G V E+EA+ + ++++G N
Sbjct: 471 ALYEEALVAFNTMHEV-GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDT 529
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV-ECVE 345
+ I+ Y + + ++ V+ + + PD+R +L+V + +LV EC E
Sbjct: 530 FNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS------FARLVDECRE 583
Query: 346 KSN---------SKLGYVVKL--------------LLEE--------------QDIEGDF 368
+ S + Y + L LLEE Q I+GD+
Sbjct: 584 QFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDY 643
Query: 369 KKEAT--------ELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDI 420
++ + NS + + N L+D L E A ++L ++ ++
Sbjct: 644 DDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPEL 703
Query: 421 QSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGK 473
++ WS+ + +S G TAL +W+ND++ L G + P L + + G+
Sbjct: 704 FRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKG-DLPQLAVVVSVRGQ 755
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 13/301 (4%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K ++ N F+ + K + G++ L +++ M + I KPN Y ++ +GR +
Sbjct: 100 KNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDK 159
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ EM G+S + +Y +L+ AYGR E +L + MK + + S+ YNT++
Sbjct: 160 CLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN 219
Query: 222 MCADVGYTDEA-FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
CA G E +F +M+ E QPD T++++++ C+ RG EAE +F M + G
Sbjct: 220 ACARGGLDWEGLLGLFAEMR-HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELG 338
P+L + L++ +GK +R + V L + G PD LL ++ KE +G
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 339 -----KLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
+ C +N+ Y V L L Q D ++ S + D A N LI+
Sbjct: 339 VFHQMQAAGCTPNANT---YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 394 L 394
+
Sbjct: 396 V 396
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 107/214 (50%), Gaps = 2/214 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L++ Y +G+ + V+ +M+A G PN TY+ LL+ G++ R V+ ++
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + P+ TY L+ +G Y ++ ++++ +M E+ ++ + Y ++ C
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +I + M ++ + P S ++ +I EA FN M E G P++
Sbjct: 436 GLHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
SL+ + + + L+RL + GI P +R
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGI-PRNR 527
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 22/334 (6%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
+ E++ ++ +++R+ P S L+ + G DG +++M G KP + TYN
Sbjct: 40 MVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYN 99
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
++D M + + +++EM GL P+ TY S++ +G+ +DT+ + EMK+
Sbjct: 100 IMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 159
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
+ V YN L+ G + E F +MK + +P+ ++S+++ G + +
Sbjct: 160 CCEPDVITYNALINCFCKFGKLPKGLEFFREMKRN-GLKPNVVSYSTLVDAFCKEGMMQQ 218
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------D 319
A + +M G PN + TSLI Y K D R N + ++G+ + D
Sbjct: 219 AIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALID 278
Query: 320 RFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
CG + P E L L E VE + K+ V +L + + +A + F I
Sbjct: 279 GLCG------WENPTEGLHLLDEMVE-LDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRI 331
Query: 380 SKD----VKKAYCNCLIDLCVNLNLLENACKLLE 409
S D A +ID N +E A L E
Sbjct: 332 SNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFE 365
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 9/241 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++LI Y GN + EM +GV+ N++TY L+D + + P + +
Sbjct: 233 PNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHL 292
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY-REMKEKGMQLSVTLYNTLLAMCA 224
EM + + T+ L+ + + + + R + G+Q + +Y ++
Sbjct: 293 LDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLC 352
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ A +FE M + + PD ++S++ +G V EA A+ ++M+E G + +L
Sbjct: 353 KGNQVEAATTLFEQM-AQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDL 411
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
TSL+ + L + GI PD+ C +L ELG + E V
Sbjct: 412 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK-----KHYELGCINEAV 466
Query: 345 E 345
E
Sbjct: 467 E 467
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 3/150 (2%)
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
T N P + + +L E+ + + +MK + N LL A +G T
Sbjct: 17 TRNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKT 76
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLT 288
D F+DM + +P +T++ MI C C+ G V A +F EM G P+
Sbjct: 77 DGVKRFFKDMIGA-GAKPTVFTYNIMID-CMCKEGDVEAARGLFEEMKFRGLIPDTVTYN 134
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+I +GK R DD V + ++ PD
Sbjct: 135 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 164
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K +D AR E D +++TL+ Y AG L V+ EM GV P+++T+ +L+
Sbjct: 246 KMFDEMAR-EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHA 304
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
M RA + + +M + GL N T+ +L+ + R + +D L +EM+E +Q S
Sbjct: 305 MCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPS 364
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V YN L+ +G DEA E+ +M+ ++ +PD T+S TI S K+ + ++ F
Sbjct: 365 VVCYNVLINGYCKLGRMDEARELIHEME-AKGMKPDVVTYS---TILSGYCKIGDTDSAF 420
Query: 273 ---NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ML+ G P+ +SLI+ + +R D ++ +LG+ PD+
Sbjct: 421 ELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVY-EEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+ PN ++ L++ G + L V ++M+ G PN++TYN L+ RA
Sbjct: 150 VAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAA 209
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ + M + G+ P+ T+ +++ +A ED ++ EM +G+ YNTL++
Sbjct: 210 ERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSG 269
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G EA +F +M + + PD TF+S+I G + A A+ +M E G
Sbjct: 270 YCKAGCLHEALAVFAEM-AQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
N F T+LI + + DD + A+ + E I P
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQP 363
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 5/214 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TL+ + AG D + M+ GV+P+++T+N +++ + +A R + +
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKM 247
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
+ EM GL+P+ +Y +L+ Y +A + L+V+ EM +KG+ V + +L+ AMC
Sbjct: 248 FDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMC- 306
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + A + M+ + + +TF+++I G + +A EM E +P++
Sbjct: 307 RAGNLERAVALVGQMR-ERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSV 365
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI Y K R D+ ++ + G+ PD
Sbjct: 366 VCYNVLINGYCKLGRMDEARELIHEMEAKGMKPD 399
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 1/220 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R R++ F+ LI + G D L +EM+ ++P+++ YN L++ + R
Sbjct: 322 RERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRM 381
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + + EM G+ P+ TY+++L Y + + + R+M +KG+ Y++L
Sbjct: 382 DEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSL 441
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + +A E+FE M QPD +T++++I G V +A ++ +EM++ G
Sbjct: 442 IRGLCEERRLGDACELFEKMLQL-GLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKG 500
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ + LI K+ RT + R L +L PD+
Sbjct: 501 VLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN 540
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 2/179 (1%)
Query: 138 GVKPNMITYNNLLDTM-GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
GV PN+ TYN L+ + R +R + + +M G +PN TY +L+ A+ RA +
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ M+E G++ S+ +NT++ G ++A ++F++M + E PD ++++++
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM-AREGLTPDGVSYNTLV 267
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ G + EA A+F EM + G P++ TSLI +A + V + ++ E G+
Sbjct: 268 SGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGL 326
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 120/254 (47%), Gaps = 24/254 (9%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN 142
K R + +E ++ A+ K D +ST++ Y G+ D + +M GV P+
Sbjct: 377 KLGRMDEARELIHEMEAKGMKP--DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPD 434
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
ITY++L+ + +R ++++M GL P+ TY +L+ + + + LS++
Sbjct: 435 AITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHD 494
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC--- 259
EM +KG+ V Y+ L+ + T EA + + E+ PD+ + +++ C
Sbjct: 495 EMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL-YYEDPVPDNIKYEALMHCCRTA 553
Query: 260 ------------SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
S +G +++A+ ++ ML+ ++ + V + LI + R ++++AL
Sbjct: 554 EFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGH---CRGGNIMKAL 610
Query: 308 N---RLPELGITPD 318
+ +L G +P+
Sbjct: 611 SFHKQLLRCGFSPN 624
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 36/181 (19%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G P+++ YN +L + A P + + M +G++PN TY L+RA
Sbjct: 115 GYAPSLLAYNAVLLALSDASLP-SARRLLASMLRDGVAPNVYTYNILVRA---------- 163
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+CA G +EA + D C P+ T+++++
Sbjct: 164 ------------------------LCAR-GQREEALGVVGDDMRGAGCAPNVVTYNTLVA 198
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G+V AE + M E G P+L +++ KA R +D + + + G+TP
Sbjct: 199 AFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTP 258
Query: 318 D 318
D
Sbjct: 259 D 259
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 13/276 (4%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
F+ ++ ++M+ GVK ++ T N L+ G R + + GL N +Y
Sbjct: 140 FEQTESLLDDMEKRGVKGSISTVNILIGFFGDLDRCVGLVKKW------GLRFNAYSYKC 193
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
LL+ Y R R + VY +M G L + +N LL A D+A+++FEDMK
Sbjct: 194 LLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKR-R 252
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+C+PD++T++ MI + GK E+ A+F MLE GF NL ++I+ K + D
Sbjct: 253 HCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKA 312
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQD 363
V +++ E G P++ LLNV+ + +L KL VE S + +
Sbjct: 313 VLLFSKMVENGCQPNEFTYSVLLNVL--VAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTL 370
Query: 364 IEGDFKKEATELF----NSISKDVKKAYCNCLIDLC 395
+ EA LF N K K AY + L LC
Sbjct: 371 SKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLC 406
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 11/272 (4%)
Query: 88 SKLKEKSYDTRARNEKWRI----DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
SKL S R W + D +A+ ++++ ++G +++ + +
Sbjct: 371 SKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDT 430
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
I YN + +GR K+ + +Y++M +G P+ TY L+ +YGRA + + ++ E
Sbjct: 431 IMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEE 490
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
++ Q V YN+L+ G DEA F++M+ + PD T+S++I
Sbjct: 491 LENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQ-EKGLNPDVVTYSTLIECFGKTD 549
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
KV A ++F+EM+ G PNL L+ C ++ RT + V +L + G+TPD
Sbjct: 550 KVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD----S 605
Query: 324 CLLNVMTQTPKEELGKLVECVEKSNSKLGYVV 355
V+ + GKL V + N G+VV
Sbjct: 606 ITYAVLERLQSGRHGKLR--VRRQNPITGWVV 635
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW + NA+S L++ Y + D VY +M G ++ +N LLD + + ++
Sbjct: 180 KKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKV 239
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++++M P+ TY ++R G+A +++L++++ M EKG L++ YNT+
Sbjct: 240 DKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTM 299
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ A D+A +F M + CQP+ +T+S ++ + G++++ +
Sbjct: 300 IEALAKGRMADKAVLLFSKMVEN-GCQPNEFTYSVLLNVLVAEGQLNKLD 348
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 12/237 (5%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ +D AF+ L+ D V+E+MK +P+ TY ++ G+A + +
Sbjct: 219 YSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESL 278
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ M + G + N Y +++ A + R + + ++ +M E G Q + Y+ LL +
Sbjct: 279 ALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVL 338
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++ I E K N Q ++ + S G SEA +F M + +
Sbjct: 339 VAEGQLNKLDNIVEMSKKYMNKQ----IYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGD 394
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
S+++ + + + + LNR E IT D +M T LG+L
Sbjct: 395 KDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTD--------TIMYNTVFTALGRL 443
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 122/229 (53%), Gaps = 1/229 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FSTLI+L G ++ +++ ++KA G+ P+ + YN++++ G+AK + + +
Sbjct: 94 DLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLL 153
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + GL P+ +Y L+ AY ++ + V+ EMK KG+QL VT N ++ + +
Sbjct: 154 AEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKL 213
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLF 285
+A E+F M + Q + T+++MI + +SEA +F M + G EPN+
Sbjct: 214 EMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVI 273
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+++ +G + + +R + ++ + GI P+ L+++ +T K
Sbjct: 274 TYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGK 322
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 6/227 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMK-AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++T+IK+Y A NV+ M+ GV+PN+ITYN +L G + + + ++M
Sbjct: 239 YNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKM 298
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+ PN TY++L+ YG+ + +++ ++EKG ++ LY +++ + G
Sbjct: 299 QQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLV 358
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A + E++K QPD + I+I + K+ EA ++ EAG S
Sbjct: 359 AHAKRLLEELK-----QPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKS 413
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+IQ + + +R+ + + + E G PD LL Q + E
Sbjct: 414 MIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLE 460
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 3/192 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQV-KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
G P++ YN +L + RA R W++ + + EM + L P+ T+++L+ YGRA ED
Sbjct: 20 GYAPSIFAYNVVLKNVLRA-RQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLED 78
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ +EM+ G++ + +++TL+ + V +A +F +K+S PD ++SMI
Sbjct: 79 AMGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKAS-GIAPDKVIYNSMI 137
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ EA+ + EM EAG P+ T LI Y ++Q+ + + + GI
Sbjct: 138 NLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQ 197
Query: 317 PDDRFCGCLLNV 328
D C +++V
Sbjct: 198 LDVTTCNMMIDV 209
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM + P+ T++ L+ GRA R +EM G+ P+ +++L+ G+ +
Sbjct: 50 EMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTLIELAGKVK 109
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
S++ ++K G+ +YN+++ + + EA + +MK + PD+ ++
Sbjct: 110 DYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEA-GLMPDTVSY 168
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ +I + K EA+ +F EM G + ++ +I YGK + D
Sbjct: 169 TILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRD 218
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + A + +Y G +TY +++ R KR +++ M ++
Sbjct: 378 TAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRES 437
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G P+ T LL AYG+ R ED +Y +M+E+G L ++ +L + D EA
Sbjct: 438 GFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREA 497
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
++F +K E D + +MI I K++EA +F+EM
Sbjct: 498 EDMFAALK-LEGLDGDE-LYLTMIRIYERASKLNEASRLFSEM 538
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 111/237 (46%), Gaps = 9/237 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK+ + ++ I+PNA +STLI +YG G +D +++ ++ G + + I Y ++
Sbjct: 289 EKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSM 348
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG- 208
+ RA K + +E+ + P +T S+L +A E+ +Y E G
Sbjct: 349 IVVYERAGLVAHAKRLLEELKQPDIVPR-DTAISIL---AKAEKLEEAAKLYWRSHEAGE 404
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ SVT Y +++ + + A ++FE+M+ S PDS T ++ ++ +A
Sbjct: 405 IKESVT-YKSMIQLFMRNKRSKNAIDVFENMRES-GFLPDSETTVVLLAAYGQLRQLEDA 462
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
E ++ +M E G V +++ YG A++ + L G+ D+ + +
Sbjct: 463 EKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDELYLTMI 519
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+T+I Y G D L V M+ +G++ ++ TYN L + R R + KT+ M
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ PN+ TY +L+ + + + ++REM KG SV YN ++ G
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIR 429
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E F + PD +T++S++ GKV A +F EM G EPN+ T+L
Sbjct: 430 EA-ERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTAL 488
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
I K R+++ + + + + G+TPDD L+ + ++++
Sbjct: 489 ISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDI 535
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 3/231 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
SK++ + +A+N D ++ +I Y AGN V++E G++PN TY
Sbjct: 219 SKVEAVVDEMKAKNVAG--DVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYG 276
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
L++ + + + + +M G+ N + +++ Y R ++ L V M++
Sbjct: 277 VLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKM 336
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++L V YNTL V EA + M + P+ T++++I+I G + E
Sbjct: 337 GIELDVYTYNTLACGLCRVNRMAEAKTLLHIM-IEKGVPPNYVTYTTLISIHCKEGDMVE 395
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A +F EM G P++ ++ Y K + R + + G+ PD
Sbjct: 396 ARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPD 446
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 7/233 (3%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ P A S ++ + +G D + +EM GV+ N + YN+LLD R K +V+ +
Sbjct: 130 VSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQEL 189
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M + G+ TY L+ + A +V EMK K + V LY ++
Sbjct: 190 LEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCR 249
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A E+F++ + +P+ T+ +I G++ AE + +M G N
Sbjct: 250 AGNVRRASEVFDECVGN-GIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQI 308
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGI-----TPDDRFCG-CLLNVMTQT 332
+ ++I Y + D+ ++ + ++GI T + CG C +N M +
Sbjct: 309 IFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEA 361
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 98 RARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
R EK + P+ + ++L+ + G D L ++EEMK G +PN++ Y L+ + +
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAK 494
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
R + +Y +M GL+P+ + Y++L+
Sbjct: 495 EGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 9/224 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA---KRPWQVKTIYK 167
F L++ YG AG+ V +M+ +GV+P M TY L+D G+A +R WQ ++
Sbjct: 101 FDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQA---WE 157
Query: 168 EMTDNGLSPNWNTYASLLRAYGR---ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+M + GL PN Y S++ G+ E T + + G++ + T YN ++
Sbjct: 158 DMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYG 217
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D+ + E M++ D++T S+++ S G+V +A F+ + G +P+L
Sbjct: 218 QQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSL 277
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
T+++ G A R+D+++R L+++ LG+ P ++N
Sbjct: 278 HAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINA 321
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 149/319 (46%), Gaps = 16/319 (5%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM- 169
++ LI +G AG+ +E+M+ G++PN++ Y +++ T+G+ ++ + EM
Sbjct: 136 YTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQ 195
Query: 170 --TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK-EKGMQLSVTLYNTLLAMCADV 226
+ +G+ PN TY +++ +YG+ + + ++ M+ + G+ L ++ ++A +
Sbjct: 196 RSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRA 255
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A E F+ + ++ QP +++++ + G+ E ++M G +P+ V
Sbjct: 256 GRVDKALEAFDSIAAT-GGQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAV 314
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE-ELGKLVECVE 345
++I +GKA+ ++ + G+ D + L++ +T K E K ++
Sbjct: 315 YNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMK 374
Query: 346 KSN-SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVK---KAYCNCLIDLCVNLNLL 401
+ Y + L++ F+K L + + K+ + N LID +
Sbjct: 375 REGLQPTMYTIASLMDAYTRADQFEK-VLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKP 433
Query: 402 ENACKLL-----ELGLTLE 415
E A K+L E G+ LE
Sbjct: 434 EEAEKVLCGAMKEYGIALE 452
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 102 EKWRIDPN------AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
E+ R DP S ++ + AG D L ++ + A G +P++ + +L +G
Sbjct: 230 ERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHMLGT 289
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
A R ++ +M G+ P+ Y +++ A+G+AR + ++ M+ G+ V
Sbjct: 290 AGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKT 349
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
YNTL+ D+W + GK EAE + M
Sbjct: 350 YNTLI---------------------------DTWAKT---------GKAVEAEKFYVLM 373
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
G +P ++ + SL+ Y +A + + V+R ++R+ + G PD+ L++ + K
Sbjct: 374 KREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKP 433
Query: 336 ELGKLVEC 343
E + V C
Sbjct: 434 EEAEKVLC 441
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I +G A N ++ ++ M+ GV ++ TYN L+DT + + + + Y M
Sbjct: 315 YNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMK 374
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL P T ASL+ AY RA E L + MK++G ++N L+ +G +
Sbjct: 375 REGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKPE 434
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM-LEAGFEPNLFVLTS 289
EA ++ ++ F+S+I + G + +AE + M + +P++ LT+
Sbjct: 435 EAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKAEEWLHRMNTDYATKPDIKTLTT 494
Query: 290 LI 291
L+
Sbjct: 495 LL 496
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 137/285 (48%), Gaps = 37/285 (12%)
Query: 86 RASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+A K+++ K +D R E D +++TL+ Y AG L+V+ EM G+ P++
Sbjct: 272 KAGKMEDARKVFDEMVR-EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+T+ +L+ M +A + T+ ++M + GL N T+ +L+ + + + +D L R
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS-----------------ENCQ 246
MK+ ++ SV YN L+ VG DEA E+ +M++ +NC
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450
Query: 247 -----------------PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
PD+ T+SS+I + ++S+A +F M++ G +P+ F TS
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
LI + K + + +++ + G+ PD L+N ++++ +
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TL+ + AG DG + M+ G+KPN++T+N++++ M +A + + +
Sbjct: 223 PNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKV 282
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ EM GL+P+ +Y +L+ Y +A + LSV+ EM +KG+ V + +L+ +
Sbjct: 283 FDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCK 342
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A + M+ Q + TF+++I +G + +A M + +P++
Sbjct: 343 AGNLERAVTLVRQMR-ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVV 401
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI Y R D+ L+ + G+ PD
Sbjct: 402 CYNALINGYCMVGRMDEARELLHEMEAKGLKPD 434
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L++ G+ L++ +M+ G PN++TYN L+ RA +
Sbjct: 186 VAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 245
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M + GL PN T+ S++ +A ED V+ EM +G+ YNTL+
Sbjct: 246 RLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGY 305
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + EA +F +M + + PD TF+S+I + G + A + +M E G + N
Sbjct: 306 CKAGCSHEALSVFAEM-TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMN 364
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
T+LI + K DD + A+ + + I P
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP 398
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
P F +LIK Y + N G P+++ YN +L + A + +
Sbjct: 120 PRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLLALSDASL-TSARRFF 178
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M +G++PN TY L+RA + ++ LS+ R+M+ G +V YNTL+A
Sbjct: 179 DSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRA 238
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A E M +P+ TF+SM+ GK+ +A +F+EM+ G P+
Sbjct: 239 GEVDGA-ERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVS 297
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+L+ Y KA + + + + + GI PD L++VM + E
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 347
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTM-GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++ M + GV PN+ TYN L+ + GR R + +I ++M G PN TY +L+ A+
Sbjct: 178 FDSMLSDGVAPNVYTYNILVRALCGRGHRK-EALSILRDMRGAGCGPNVVTYNTLVAAFF 236
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
RA + + M+E G++ ++ +N+++ G ++A ++F++M E PD
Sbjct: 237 RAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM-VREGLAPDG 295
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++++++ G EA ++F EM + G P++ TSLI KA + V + +
Sbjct: 296 VSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQ 355
Query: 310 LPELGI 315
+ E G+
Sbjct: 356 MRERGL 361
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 3/212 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R +++ F+ LI + G D L MK +KP+++ YN L++ R
Sbjct: 357 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRM 416
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + + EM GL P+ TY++++ AY + + ++M EKG+ Y++L
Sbjct: 417 DEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSL 476
Query: 220 L-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +C + +D A +F++M QPD +T++S+I G V A ++ ++M++A
Sbjct: 477 IRVLCGEKRLSD-AHVLFKNM-IKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA 534
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
G P++ + LI K+ R + + L +L
Sbjct: 535 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + P+ F+ +LI + GN + L+++++M GV P+++TY+ L++ + ++ R
Sbjct: 498 KLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAM 557
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + + ++ P Y +L+ +A + L++ + KG+
Sbjct: 558 EAQQLLFKLYHEDPIPANTKYDALMHCCRKAEL-KSVLALLKGFCMKGLM---------- 606
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAG 279
+EA ++++ M N D +S +I CR G V +A + +ML+ G
Sbjct: 607 ---------NEADKVYQSML-DRNWNLDGSVYSVLIH-GHCRAGNVMKALSFHKQMLQGG 655
Query: 280 FEPNLFVLTSLIQCY---GKAQRTDDVVRAL 307
F PN SLI+ G D V++ L
Sbjct: 656 FAPNSTSTISLIRGLFENGMVVEADQVIQQL 686
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 3/222 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ ++ LI+ YG G F L +Y+EM +G ++ TYN + G+ ++ +
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERL 180
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM G+ P+ TY +LL Y + Y + REM E G + ++ YN +L+
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
EA ++FE++KS + P+ T+S+M+++ G +EA +++EM+EAG P +
Sbjct: 241 EQSVAEATQLFENLKS-KGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ LI+ YG + + + + GI PD + L++
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMD 341
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LIK Y G C +++EMK G PN TYN L+ GR + +Y EM
Sbjct: 91 YTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMD 150
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G + + +TY + YG+ ED + EM KG+ YNTLL + A Y
Sbjct: 151 GVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFV 210
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A EI +M + +P+ WT++ M++ V+EA +F + G PN+ +++
Sbjct: 211 KAHEILREM-TEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAM 269
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
+ YG+ + + + + E G P
Sbjct: 270 LSLYGRHGLYTEAAKLWDEMIEAGCIP 296
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 5/230 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT-- 164
D + ++ I +YG G + + +EM GV P+ +TYN LLD AK+ + VK
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVY--AKKSYFVKAHE 214
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I +EMT+ G PN TY +L + + + + ++ +K KG+ ++ Y+ +L++
Sbjct: 215 ILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYG 274
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA +++++M + C P +S +I G EA A F +M ++G P+
Sbjct: 275 RHGLYTEAAKLWDEMIEA-GCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDT 333
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ T+L+ YGKA R + + + G PD G L+ +
Sbjct: 334 KIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGR 383
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ +G + + ++MK V N++TY NL+ R + ++
Sbjct: 52 DEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLF 111
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM D G SPN TY +L++ YGR ++ L +Y EM G V YN +AM
Sbjct: 112 QEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKR 171
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++ + ++M ++ PD T+++++ + + + +A + EM EAG+ PN++
Sbjct: 172 GLLEDMERLLDEM-DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWT 230
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ K Q + + L G+ P+
Sbjct: 231 YNIMLSSARKEQSVAEATQLFENLKSKGVVPN 262
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
D L + E MK G KP+ I YN L++ + + R + I +M + +S N TY +
Sbjct: 34 LDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTN 93
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L++ Y +D +++EMK+KG + YN L+ G EA E++++M
Sbjct: 94 LIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGV- 152
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
C D T++ I + RG + + E + +EM G P+ +L+ Y K
Sbjct: 153 GCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKA 212
Query: 304 VRALNRLPELGITPD 318
L + E G P+
Sbjct: 213 HEILREMTEAGYRPN 227
>gi|413951888|gb|AFW84537.1| hypothetical protein ZEAMMB73_783984 [Zea mays]
Length = 238
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 111/211 (52%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+ + ++ LI + A + +Y EM G P +ITYN L+D + +A++ + ++
Sbjct: 9 NSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEKYQEASSLT 68
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + G P+ TY SL+R R + + L ++ E+ + G+Q+ V ++N L+
Sbjct: 69 KEMLERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILIHGLCSA 128
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++AF I+ +MK +NC P+ T+++++ G + A +++ +L+ G +P++
Sbjct: 129 GKVNDAFCIYLEMK-EKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLKPDIVT 187
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ I+ RT + V LN + GI P
Sbjct: 188 YNTRIKGLCSCNRTPEGVLLLNEVLATGIMP 218
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVG 227
M +G PN + Y +L+ + RA D + +Y EM G ++ YNTL+ +C
Sbjct: 1 MMKDGCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEK 60
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
Y EA + ++M +PD T+ S+I +C + K+ A ++NE+L+AG + ++ V
Sbjct: 61 Y-QEASSLTKEML-ERGFKPDIRTYGSLIRGLCRVK-KIDAALCIWNEILDAGIQVDVIV 117
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI A + +D + E +P+
Sbjct: 118 HNILIHGLCSAGKVNDAFCIYLEMKEKNCSPN 149
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D + LI +AG + +Y EMK PN++TYN L+D +
Sbjct: 112 QVDVIVHNILIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAAS 171
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ + DNGL P+ TY + ++ + + + E+ G+ SV ++ L+
Sbjct: 172 LWAAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVITWSILV 227
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 121/234 (51%), Gaps = 6/234 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
RAS+ +E +D+ +K+ D ++ L++ + AGN V+ EMK G+KPN+ T
Sbjct: 179 RASQAQE-FFDSL--KDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYT 235
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y+ ++D++ R + + I+ EM D G PN TY SL+R + +A E L VY +MK
Sbjct: 236 YSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMK 295
Query: 206 EKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
G + YN L+ C D D A ++ M + + C P++ TF+++ + G
Sbjct: 296 RLGCEPDTVTYNFLIETHCKDENLED-AIKVIGLM-AKKGCAPNASTFNTLFGCIAKLGD 353
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V+ A M+ +M E E N +L++ + ++ TD V++ + E I P+
Sbjct: 354 VNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPN 407
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R P A++ ++ G FD + MKA V + T+ L+ RA +
Sbjct: 90 FRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRYVRAGLAAEAI 149
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M D P+ ++ L+ R R + +K+K + V +Y L+
Sbjct: 150 HAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDK-FEPDVIVYTNLVRGW 208
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEP 282
G EA +F +MK + +P+ +T+S +I ++C C G+++ A +F EML+AG +P
Sbjct: 209 CRAGNISEAERVFGEMKVA-GIKPNVYTYSIVIDSLCRC-GQITRAHDIFAEMLDAGCQP 266
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N SL++ + KA RT+ V++ N++ LG PD
Sbjct: 267 NSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPD 302
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 79/174 (45%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+ + N + + V M G PN T+N L + + +Y
Sbjct: 302 DTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMY 361
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K+M + N TY +L++ + ++ + L + EM E ++ +V Y L+ M +
Sbjct: 362 KKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGM 421
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G+ + A++ F +M + +P + ++ G++ + E + +M++ GF
Sbjct: 422 GHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKMVDRGF 475
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
MK + + ++V + L+ G EA F M+ NC+PD FS +I+I
Sbjct: 120 MKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDY-NCKPDKIAFSILISILCRER 178
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----- 318
+ S+A+ F+ L+ FEP++ V T+L++ + +A + R + GI P+
Sbjct: 179 RASQAQEFFDS-LKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYS 237
Query: 319 ---DRFCGC 324
D C C
Sbjct: 238 IVIDSLCRC 246
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 155/318 (48%), Gaps = 12/318 (3%)
Query: 109 NAFS---TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+AFS L L+ T + L + EM+ GV N+ T N L+ G + +
Sbjct: 117 DAFSYNRILALLFRTRADPSEALRIVSEMERDGVSGNISTVNLLVGIGGGGVEVTKCLEL 176
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ GL N TY +L+A+ R+R VY EM+ KG L + YN LL A
Sbjct: 177 AMKW---GLRLNGYTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAK 233
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A+++FEDMK + C+PD++T++ +I + GK S+ + F+EM+ G NL
Sbjct: 234 SGMVDQAYQVFEDMKQ-KYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLI 292
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
+LI+ GK + D V+ L+++ E G P+ L+++ + + L ++++
Sbjct: 293 AYNTLIEALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDIC 352
Query: 345 EK--SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLE 402
++ + S Y+VK L + + + +++NS + A+ + L LC + LE
Sbjct: 353 DRYMNKSIYSYLVKSLSKSGHVS-EAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLE 411
Query: 403 NACKLLELGLTLEVYTDI 420
A LL + V TD+
Sbjct: 412 -AIDLLHMMPEKGVATDV 428
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 53/241 (21%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +AF +++++ +G +++ M GV ++ YN + +G+ K+ + +++
Sbjct: 392 DRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLF 451
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M NG++P+ TY ++ +YGR V
Sbjct: 452 DKMKANGIAPDLFTYNIMISSYGR-----------------------------------V 476
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A +FEDM +S +C+PD T++S+I G + EA +F EM E G+ P++F
Sbjct: 477 GLVDKASGLFEDMNAS-SCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFT 535
Query: 287 LTSLIQCYGKAQRTDDVVRA-LNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ LI+C+GK+ + D L+ + E GC+ NV+T L++C+E
Sbjct: 536 YSILIECFGKSNKVDMACNLFLDMIAE----------GCIPNVVTYN------ILLDCLE 579
Query: 346 K 346
+
Sbjct: 580 R 580
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
+++++MKA G+ P++ TYN ++ + GR + ++++M + P+ TY SL+
Sbjct: 449 SLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCL 508
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ ++ +++EM+EKG V Y+ L+ D A +F DM +E C P+
Sbjct: 509 GKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDM-IAEGCIPN 567
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
T++ ++ GK +EA + M + G P+ + L + ++QRT
Sbjct: 568 VVTYNILLDCLERHGKTAEAHKHYETMKQQGLTPDSITCSILERLESRSQRT 619
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%)
Query: 89 KLKEKSYDTRA--RNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
KLK+ S+ T + + I P+ F+ +I YG G D ++E+M A KP++I
Sbjct: 440 KLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVI 499
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TYN+L++ +G+ + ++KEM + G P+ TY+ L+ +G++ + +++ +M
Sbjct: 500 TYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDM 559
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+G +V YN LL G T EA + +E MK + PDS T S
Sbjct: 560 IAEGCIPNVVTYNILLDCLERHGKTAEAHKHYETMK-QQGLTPDSITCS 607
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 103 KW--RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
KW R++ + +++ + + VYEEM+ G ++ YN LLD + ++
Sbjct: 179 KWGLRLNGYTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVD 238
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q ++++M P+ TY L+R GRA LS + EM KG L++ YNTL+
Sbjct: 239 QAYQVFEDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLI 298
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS----------------SMITIC----- 259
D+ + M CQP+ +T+S ++ IC
Sbjct: 299 EALGKNKMVDKVIFVLSKMIEG-GCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYMN 357
Query: 260 -----------SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
S G VSEA +F +M + + S+++ + +T + + L+
Sbjct: 358 KSIYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLH 417
Query: 309 RLPELGITPD 318
+PE G+ D
Sbjct: 418 MMPEKGVATD 427
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+ +G + D N++ +M A G PN++TYN LLD + R + + Y
Sbjct: 532 DVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKTAEAHKHY 591
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRAR 192
+ M GL+P+ T + L R R++
Sbjct: 592 ETMKQQGLTPDSITCSILERLESRSQ 617
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RNE + + F+ LIK++G G F + V+E++K P+++T+N LL G+
Sbjct: 131 RNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMD 190
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+V ++KEM G P +T+ +L+ +Y R + ++VY+ M E G+ ++ YN +
Sbjct: 191 SEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAV 250
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
LA A G ++ ++ +MK C+P+ T+ S++ + ++ A+ E+
Sbjct: 251 LAALARGGLWKQSEKVLAEMKDGR-CKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI 309
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EP +L +L+ K + RA L + G +PD
Sbjct: 310 IEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPD 348
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+TLI Y G+FD + VY+ M GV P++ +YN +L + R Q + + E
Sbjct: 210 DTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAE 269
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D PN TY SLL AY + E ++ E+ ++ L TL+ + +
Sbjct: 270 MKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDL 329
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
E F +++ PD T ++M++I R V++A + + M GF P+L
Sbjct: 330 LMETERAFLELRQ-RGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYN 388
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ Y ++ + L + GI PD
Sbjct: 389 SLMYMYSRSANFERSEEILREILAKGIRPD 418
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ E++ G P++ T N ++ GR + + I M G +P+ TY SL+ Y
Sbjct: 336 AFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYS 395
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
R+ E + + RE+ KG++ + YNT++ G +A + +M+ S PD
Sbjct: 396 RSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRES-GPAPDI 454
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T+++ I + EA + M++ G +PN S++ Y K R D+ +N
Sbjct: 455 ITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNN 514
Query: 310 LPEL 313
L +L
Sbjct: 515 LRKL 518
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
K+ + VN K + + + R R + D + ++ +YG + + M
Sbjct: 318 KTLVLVNSKCDLLMETERAFLELRQRG--FSPDITTLNAMVSIYGRRQMVAKANEILDCM 375
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G P++ TYN+L+ R+ + + I +E+ G+ P+ +Y +++ AY R
Sbjct: 376 KRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRM 435
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
D V EM+E G + YNT +A A EA ++ M C+P+ T++S
Sbjct: 436 RDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYM-IKHGCKPNQSTYNS 494
Query: 255 MI 256
++
Sbjct: 495 IV 496
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R PN + +L+ Y + + EE+ + ++P + L+ + +
Sbjct: 274 RCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMET 333
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ + E+ G SP+ T +++ YGR + + MK G S+T YN+L+ M
Sbjct: 334 ERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYM 393
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ + + EI ++ ++ +PD +++++I G++ +A + +EM E+G P
Sbjct: 394 YSRSANFERSEEILREI-LAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAP 452
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + I Y + + + + + G P+
Sbjct: 453 DIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPN 488
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 62/122 (50%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++L+ +Y + NF+ + E+ A G++P++I+YN ++ R R + EM
Sbjct: 387 YNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR 446
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G +P+ TY + + +Y + + V M + G + + + YN+++ + D
Sbjct: 447 ESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRD 506
Query: 231 EA 232
EA
Sbjct: 507 EA 508
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%)
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+PD +T++++++ GK A +F EM G +PN+ +LI+ +G + ++++
Sbjct: 101 KPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMK 160
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQ 331
+ +PD LL+V Q
Sbjct: 161 VFEDIKTFQCSPDIVTWNTLLSVFGQ 186
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K E+ ++T E ++P+ F +I + AGN++ V+ M GV + +TY
Sbjct: 203 KEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTVTY 262
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N+L+ K +V IY +M +GL P+ +YA L++AYGRAR E+ L+V+ EM +
Sbjct: 263 NSLMSFETNYK---EVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLD 319
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G++ S YN LL A G ++A +F+ M+ + C PD ++++M++ +
Sbjct: 320 AGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRR-DRCTPDLCSYTTMLSAYVNASDME 378
Query: 267 EAEAMFNEMLEAGFEPNLF-----------------------------------VLTSLI 291
AE F + + G +PN+ +LT+++
Sbjct: 379 GAENFFKRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIM 438
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEELGKLV 341
YGK + V + G+ PD + LL++ TQ ++E +LV
Sbjct: 439 DAYGKNKDFGSAVIWYKEMEHHGVPPDQKAQNILLSLAKTQDEQKEASQLV 489
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 115/242 (47%), Gaps = 9/242 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W + F LI YG G+F+G V M G PN++++ L++ GR R +
Sbjct: 112 WDFNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNAE 171
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
I++ M +G P+ TY +L+ + + + E+ + ++ +++ ++
Sbjct: 172 AIFRRMQTSGPEPSALTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMI 231
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDS-WTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
M G ++A ++F M +E P S T++S+++ + +VS+ ++++M +G
Sbjct: 232 YMQKKAGNYEKARKVFALM--AERGVPQSTVTYNSLMSFETNYKEVSK---IYDQMQRSG 286
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
P++ LI+ YG+A+R ++ + + + G+ P + LL+ + E +
Sbjct: 287 LRPDVVSYALLIKAYGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQAR 346
Query: 340 LV 341
+V
Sbjct: 347 VV 348
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 6/153 (3%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++K+ +D NW + G A +SV R + K L L L
Sbjct: 38 VFKDASDEADQKNWRRLMKQIEDTGSA------VSVLRRERIKKDGLPRDLVLGTLVRFK 91
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ D EI E ++S + F +IT G + AE + M G+ PN+
Sbjct: 92 QLKKWDLVSEILEWLQSQHWWDFNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNV 151
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
T+L++ YG+ R ++ R+ G P
Sbjct: 152 VSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEP 184
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 3/222 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ ++ LI+ YG G F L +Y+EM +G ++ TYN + G+ ++ +
Sbjct: 121 PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERL 180
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM G+ P+ TY +LL Y + Y + REM E G + ++ YN +L+
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
EA ++FE++KS + P+ T+S+M+++ G +EA +++EM+EAG P +
Sbjct: 241 EQSVAEATQLFENLKS-KGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ LI+ YG + + + + GI PD + L++
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMD 341
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LIK Y AG C +++EMK G PN TYN L+ GR + +Y EM
Sbjct: 91 YTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMD 150
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G + + +TY + YG+ ED + EM KG+ YNTLL + A Y
Sbjct: 151 GVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFV 210
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A EI +M + +P+ WT++ M++ V+EA +F + G PN+ +++
Sbjct: 211 KAHEILREM-TEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAM 269
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
+ YG+ + + + + E G P
Sbjct: 270 LSLYGRHGLYTEAAKLWDEMIEAGCIP 296
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ +G + + ++MK V N++TY NL+ A R + ++
Sbjct: 52 DEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLF 111
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM D G SPN TY +L++ YGR ++ L +Y EM G V YN +AM
Sbjct: 112 QEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKR 171
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++ + ++M ++ PD T+++++ + + + +A + EM EAG+ PN++
Sbjct: 172 GLLEDMERLLDEM-DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWT 230
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ K Q + + L G+ P+
Sbjct: 231 YNIMLSSARKEQSVAEATQLFENLKSKGVVPN 262
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 5/230 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT-- 164
D + ++ I +YG G + + +EM GV P+ +TYN LLD AK+ + VK
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVY--AKKSYFVKAHE 214
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I +EMT+ G PN TY +L + + + + ++ +K KG+ ++ Y+ +L++
Sbjct: 215 ILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYG 274
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA +++++M + C P +S +I G EA A F +M ++G P+
Sbjct: 275 RHGLYTEAAKLWDEMIEA-GCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDT 333
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ T+L+ YGKA R + + + G PD G L+ +
Sbjct: 334 KIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGR 383
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 1/195 (0%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
D L + E MK G KP+ I YN L++ + + R + I +M + +S N TY +
Sbjct: 34 LDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTN 93
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L++ Y A +D +++EMK+KG + YN L+ G EA E++++M
Sbjct: 94 LIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGV- 152
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
C D T++ I + RG + + E + +EM G P+ +L+ Y K
Sbjct: 153 GCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKA 212
Query: 304 VRALNRLPELGITPD 318
L + E G P+
Sbjct: 213 HEILREMTEAGYRPN 227
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 11/223 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ + AG D V+ EM+ G+ PN+ TY +++D M RA + + + + +M
Sbjct: 247 YTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMM 306
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT- 229
+ G PN T+ +++RA+ +A E L V+ +M++ G + YN L+ G +
Sbjct: 307 ETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSN 366
Query: 230 -DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A ++ M ++ C PD TF+ M+ + G V A ++ M E +PN+
Sbjct: 367 LDAAMKVLAKM-IAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYN 425
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
L++ + K + D V+R + G+ P+ + FCG
Sbjct: 426 LLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCG 468
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ ++KL GN + +YE M+ + KPN++TYN L+ + K V I
Sbjct: 385 DCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIK 444
Query: 167 KEMTDNGLSPNWNTYASLLRAY-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K+M G+ PN NTY +L+ ++ GR + ++ ++EK ++ + +Y+ +L +
Sbjct: 445 KDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLREMVEEKSLKPTKPVYDMVLMLLRK 504
Query: 226 VGYTDEAFEIFEDM 239
G + E+ E M
Sbjct: 505 AGQLRKHEELVELM 518
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y ++D + + + + EM + + + +++R Y RA + ++R M+
Sbjct: 142 YAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRME 201
Query: 206 EKGMQL-SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
E G + + +LL + EA +F+ KS PD +++++ G
Sbjct: 202 EYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSV--FPPDVVLYTTLVHAWCRAGC 259
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +AE +F EM +AG PN++ TS+I +A + L ++ E G P+
Sbjct: 260 LDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPN 313
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
N D + V +M A G P+ T+N +L + + +Y+ M + PN TY
Sbjct: 366 NLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYN 425
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
L++ + + + + L + ++M +G++ +V Y L+ G A +M
Sbjct: 426 LLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLREMVEE 485
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
++ +P + ++ + G++ + E + M + GF
Sbjct: 486 KSLKPTKPVYDMVLMLLRKAGQLRKHEELVELMADRGF 523
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI +G +G + ++Y+EM G KPN ITYN ++ + ++ R + +Y
Sbjct: 824 DTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLY 883
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ SP T+ L+ ++ +D ++ M G + + +YN L+ +
Sbjct: 884 YNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKL 943
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ D A E F+ M E +PD +++ ++ I G+V +A F ++ +AG +P+L
Sbjct: 944 GHVDTACEFFKRM-VKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVA 1002
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVE 342
+I G++QRT++ + + + GI PD + +LN+ EE GK+ E
Sbjct: 1003 YNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYE 1059
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E + FS L+ G N + + EEM+++G++PN+ TY + +GR
Sbjct: 219 RMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDG 278
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + I K M D+G P+ TY L+ A AR +D + ++ +MK + Y
Sbjct: 279 KIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYV 338
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL +D G+ D+ +I+ +M+ ++ PD TF+ ++ G+++EA + + M +
Sbjct: 339 TLLDKFSDCGHLDKVEKIWTEME-ADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRK 397
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G PNL +LI +A R DD + + + LG+ P
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 156/323 (48%), Gaps = 10/323 (3%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T+ ++ + D + TL+ + G+ D ++ EM+A G P+++T+ L++ + +A
Sbjct: 323 TKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKA 382
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + + M G+ PN +TY +L+ RA +D L ++ M+ G++ + Y
Sbjct: 383 GRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTY 442
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
L+ G+ +A E FE MK + P+ ++ + + G++ EA+AMFNE+
Sbjct: 443 ILLIDYHGKSGHPGKALETFEKMK-ARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELK 501
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-E 335
+G P+ +++CY K + D+ ++ L+ + ++ PD L++ + + + E
Sbjct: 502 SSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVE 561
Query: 336 ELGKLVECVEKSNSKLGYVV-KLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
E ++ +E+ N V +LL EG +K A +LF S++ C +
Sbjct: 562 EAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQK-AVQLFESMNGH------GCSPNT 614
Query: 395 CVNLNLLENACKLLELGLTLEVY 417
LL+ CK E+ L L+++
Sbjct: 615 ITFNTLLDCLCKNDEVDLALKMF 637
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R + ++ +++ LI +G L VY M + G+KP++ T++ L+ G+ +
Sbjct: 184 KMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRR 243
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
V + +EM GL PN TY +R GR ++ + + M + G V Y
Sbjct: 244 NIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYT 303
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ D+A +F MKSS + +PD T+ +++ S G + + E ++ EM
Sbjct: 304 VLIDALCTARKLDDAMCLFTKMKSSSH-KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEA 362
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ P++ T L+ KA R ++ L+ + + G+ P+
Sbjct: 363 DGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPN 403
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R E R D +++ L+ + AG D L+ +E++K G+ P+++ YN +++ +GR++
Sbjct: 955 RMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQ 1014
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + +++ EM + G+ P+ TY SL+ G E+ +Y E++ G++ +V YN
Sbjct: 1015 RTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYN 1074
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
L+ G ++ A+ I++ M C P++ TF+ +
Sbjct: 1075 ALIRGYTLSGNSELAYGIYKKMMVG-GCDPNTGTFAQL 1111
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 96/178 (53%), Gaps = 3/178 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ ++ L+ YG G+ D ++ M G++P++ +Y L+D + A R
Sbjct: 928 PNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHY 987
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++++ GL P+ Y ++ GR++ E+ LS++ EM+ +G+ + YN+L+
Sbjct: 988 FEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGI 1047
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
VG +EA +I+E+++ +P+ +T++++I + G A ++ +M+ G +PN
Sbjct: 1048 VGMIEEAGKIYEELQFI-GLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPN 1104
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P F LI +G D +++ M G +PN YN L++ G+ +K
Sbjct: 895 PCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFK 954
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M G+ P+ +Y L+ A +D L + ++K+ G+ + YN ++
Sbjct: 955 RMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQ 1014
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
T+EA +F +M++ PD +T++S+I G + EA ++ E+ G +PN+F
Sbjct: 1015 RTEEALSLFHEMQN-RGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTY 1073
Query: 288 TSLIQCY 294
+LI+ Y
Sbjct: 1074 NALIRGY 1080
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVK 163
D ++ ++K Y G D + + EM + +P++I N+L+DT+ GR + WQ
Sbjct: 508 DSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQ-- 565
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M + L+P TY LL G+ + + ++ M G + +NTLL
Sbjct: 566 -MFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCL 624
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D A ++F M ++ NC+PD TF+++I + ++ A +F++M + P+
Sbjct: 625 CKNDEVDLALKMFYKM-TTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPD 682
Query: 284 LFVLTSLIQCYGKAQRTDDVVR 305
L +L+ K+ + +D R
Sbjct: 683 HVTLCTLLPGVIKSGQIEDAFR 704
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
E+M+ G N +YN L+ + ++ + +Y+ M GL P+ T+++L+ A G+
Sbjct: 183 EKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKR 242
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
R + + + EM+ G++ ++ Y + + G DEA+ I + M + C PD T
Sbjct: 243 RNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRM-DDDGCGPDVVT 301
Query: 252 FSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
++ +I +C+ R K+ +A +F +M + +P+ +L+ + D V + +
Sbjct: 302 YTVLIDALCTAR-KLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360
Query: 311 PELGITPDDRFCGCLLNVMTQTPK 334
G PD L+N + + +
Sbjct: 361 EADGYAPDVVTFTILVNALCKAGR 384
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 9/203 (4%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V++ M+ ++ N+ TY + ++ Q + ++M + G N +Y L+
Sbjct: 146 VFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLL 205
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++ + ++ L VYR M +G++ S+ ++ L+ + E+M+S +P+
Sbjct: 206 QSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM-GLRPNI 264
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+T++ I + GK+ EA + M + G P++ T LI A++ DD + +
Sbjct: 265 YTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTK 324
Query: 310 LPELGITPD--------DRFCGC 324
+ PD D+F C
Sbjct: 325 MKSSSHKPDKVTYVTLLDKFSDC 347
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 37/217 (17%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
++ + + K+ + ++ + T G+ P Y L+ + E +++ EMK
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI----------- 256
G YN+L+ G +E F+++++M + C+P++ T++ +I
Sbjct: 820 GCAPDTFTYNSLIDAHGKSGKINELFDLYDEM-LTRGCKPNTITYNMVISNLVKSNRLDK 878
Query: 257 ---------------TICSC---------RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
T C+ G++ +A MF+ M+ G PN + L+
Sbjct: 879 AMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVN 938
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
YGK D R+ + GI PD + L++++
Sbjct: 939 GYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDIL 975
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 5/213 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L++ +G D ++ + M+ G+ PN+ TYN L+ + +R + ++
Sbjct: 366 DVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELF 425
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G++P +Y + YG+ E L + +MK++G+ S+ N L A++
Sbjct: 426 NNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEM 485
Query: 227 GYTDEAFEIFEDMKSSENC--QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA +IF D+ NC PDS T++ M+ S G++ +A + EML G EP++
Sbjct: 486 GRIREAKDIFNDI---HNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
V+ SLI KA R D+ + RL +L + P
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAP 575
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+ L ++ EMK G PN+ TYN LLD G++KR ++ +Y EM G PN T+ +
Sbjct: 805 EAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNII 864
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ A ++ L +Y E+ + Y L+ G ++EA +IFE+M +
Sbjct: 865 ISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQ- 923
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
C+P+ ++ +I G V+ A +F M++ G P+L T L++C R DD V
Sbjct: 924 CKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAV 983
Query: 305 RALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
L G+ PD ++N + ++ + E
Sbjct: 984 HYFEELKLTGLDPDTVSYNLMINGLGKSRRLE 1015
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 3/222 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R + ++ +++ LI G L VY+ M + G+KP+M TY+ L+ +GR +
Sbjct: 182 KMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRR 241
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + +EM GL PN TY +R GRA +D + + M+++G V Y
Sbjct: 242 DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYT 301
Query: 218 TLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
L+ A+CA G D+A E++ M++S + +PD T+ ++++ G + + ++EM
Sbjct: 302 VLIDALCA-AGKLDKAKELYTKMRASSH-KPDLVTYITLMSKFGNYGDLETVKRFWSEME 359
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ P++ T L++ K+ + D L+ + GI P+
Sbjct: 360 ADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPN 401
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P + LI AG + + ++EEM KPN YN L++ G+A ++K
Sbjct: 893 PCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFK 952
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M G+ P+ +Y L+ +D + + E+K G+ YN ++
Sbjct: 953 RMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSR 1012
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+EA +F +MK+ P+ +T++++I G V +A MF E+ G EPN+F
Sbjct: 1013 RLEEALSLFSEMKN-RGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTY 1071
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI+ + K+ D ++ +G +P+
Sbjct: 1072 NALIRGHSKSGNKDRAFSVFKKMMIVGCSPN 1102
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R E R D +++ L++ G D ++ +EE+K G+ P+ ++YN +++ +G+++
Sbjct: 953 RMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSR 1012
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + +++ EM + G+SP TY +L+ +G A + ++ E++ G++ +V YN
Sbjct: 1013 RLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYN 1072
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
L+ + G D AF +F+ M C P++ TF+ + C
Sbjct: 1073 ALIRGHSKSGNKDRAFSVFKKMMIV-GCSPNAGTFAQLPNKC 1113
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 107/203 (52%), Gaps = 10/203 (4%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
+S A K+ E+ D ++ PN ++ LI +G AGN + ++++ M G++
Sbjct: 908 RSEEAMKIFEEMPD-------YQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIR 960
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++ +Y L++ + R ++E+ GL P+ +Y ++ G++R E+ LS+
Sbjct: 961 PDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSL 1020
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ EMK +G+ + YN L+ + G D+A ++FE+++ +P+ +T++++I S
Sbjct: 1021 FSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFM-GLEPNVFTYNALIRGHS 1079
Query: 261 CRGKVSEAEAMFNEMLEAGFEPN 283
G A ++F +M+ G PN
Sbjct: 1080 KSGNKDRAFSVFKKMMIVGCSPN 1102
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ L+ +G + D +Y EM G KPN+IT+N ++ + ++ + +
Sbjct: 821 PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y E+ SP TY L+ +A E+ + ++ EM + + + +YN L+
Sbjct: 881 YYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGK 940
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A ++F+ M E +PD +++ ++ G+V +A F E+ G +P+
Sbjct: 941 AGNVNIACDLFKRM-IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTV 999
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+I GK++R ++ + + + GI+P+
Sbjct: 1000 SYNLMINGLGKSRRLEEALSLFSEMKNRGISPE 1032
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 3/223 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN ++ I++ G AG D + + M+ G P+++TY L+D + A +
Sbjct: 254 ETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKL 313
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ K +Y +M + P+ TY +L+ +G E + EM+ G V Y L
Sbjct: 314 DKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTIL 373
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G D+AF++ + M+ P+ T++++I+ ++ EA +FN M G
Sbjct: 374 VEALCKSGKVDQAFDMLDVMRV-RGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLG 432
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
P + I YGK + + ++ + GI P C
Sbjct: 433 VAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAAC 475
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 147/317 (46%), Gaps = 26/317 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVK 163
D ++ ++K Y AG D + EM + G +P++I N+L+DT+ GR WQ
Sbjct: 506 DSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQ-- 563
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + D L+P TY L+ G+ L ++ MKE G + +N LL
Sbjct: 564 -MFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCL 622
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D A ++F M + NC PD T++++I G+ A +++M + P+
Sbjct: 623 CKNDAVDLALKMFCRM-TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPD 680
Query: 284 LFVLTSLIQCYGKAQRTDDVVR-ALNRLPELGITPDDRFCGCLLN-VMTQTPKEEL---- 337
L +L+ K R +D ++ + + + G+ ++ G L+ ++ + EE
Sbjct: 681 HVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFA 740
Query: 338 -GKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVK-----KAYCNCL 391
G + + + ++ + ++++L +++ +A +LF+ +K + ++Y NCL
Sbjct: 741 EGLVCNSICQDDNLILPLIRVLCKQKK-----ALDAKKLFDKFTKSLGTHPTPESY-NCL 794
Query: 392 IDLCVNLNLLENACKLL 408
+D + N+ E A KL
Sbjct: 795 MDGLLGCNITEAALKLF 811
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
L+ + + K+ K ++ + T + G P +Y L+ E L ++ EMK
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G ++ YN LL DE FE++ +M C+P+ T + +I+ +++
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEM-LCRGCKPNIITHNIIISALVKSNSINK 876
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
A ++ E++ F P LI KA R+++ ++ +P+ P+ L+N
Sbjct: 877 ALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILIN 936
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 8/244 (3%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R+ R+ P+ FSTLI G D +V+++M A G PN+ITYN L++ + +A
Sbjct: 171 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 230
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL-- 215
+ + + + M D G++P+ TY+ L+ A+ +A ++ L + M +G +V +
Sbjct: 231 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPD 290
Query: 216 ---YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+N L+A G ++A +FE+M ++N QPD TF ++I G+V A +
Sbjct: 291 KVTFNILIAGACKAGNFEQASALFEEM-VAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ M G PN+ +L+ K+ R ++ + L + G PD G L+ + +
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409
Query: 333 PKEE 336
+ +
Sbjct: 410 SRTD 413
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 113/224 (50%), Gaps = 13/224 (5%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I + + + ++EE+ G P+++TYN L+D++ +A + + ++ +M+
Sbjct: 40 YNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 99
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL--SVTLYNTLLAMCADVGY 228
G PN TY+ L+ + ++ + +EM K + ++ YN+ L
Sbjct: 100 SRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 159
Query: 229 TDEAFEIFEDMK-SSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
T EA E+ ++ S PD+ TFS++I +C C G++ EA ++F++M+ G+ PN+
Sbjct: 160 TAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC-GQIDEACSVFDDMIAGGYVPNVIT 218
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
+L+ KA + + + + + G+TPD D FC
Sbjct: 219 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 262
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 1/197 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F LI AG + ++ + M +GV PN++TYN L+ + ++ R +
Sbjct: 325 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 384
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM +G P+ TY SL+ A RA +D L + E+K G YN L+
Sbjct: 385 EEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKS 444
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T++A + E+M + QPDS+TF++ + G ++ + +L G P+
Sbjct: 445 GKTEQAITVLEEMVGKGH-QPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATT 503
Query: 287 LTSLIQCYGKAQRTDDV 303
+S++ ++ + DDV
Sbjct: 504 CSSILDWVCRSGKLDDV 520
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 5/216 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI AG+ + ++ +M + G PN++TY+ L++ + + R + + +
Sbjct: 71 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELI 130
Query: 167 KEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS--VTLYNTLLAM 222
+EMT + PN TY S L + + + R +++ +++S ++TL+
Sbjct: 131 QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDG 190
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G DEA +F+DM + P+ T+++++ K+ A AM M++ G P
Sbjct: 191 LCKCGQIDEACSVFDDMIAG-GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTP 249
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + L+ + KA R D+ + L+ + G TP+
Sbjct: 250 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 7/231 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI AGNF+ ++EEM A ++P+++T+ L+D + +A + + I
Sbjct: 290 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M + G+ PN TY +L+ ++ E+ EM G Y +L+
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
TD+A ++ ++KS PD+ T++ ++ GK +A + EM+ G +P+ F
Sbjct: 410 SRTDDALQLVSELKSF-GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 468
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPEL---GITPDDRFCGCLLNVMTQTPK 334
+ C+ R+ ++ + L + G+ PD C +L+ + ++ K
Sbjct: 469 FAA---CFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGK 516
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYK-EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
YN +L ++ RA + I++ EM +G++P TY +++ ++ + ++ E+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
E+G V YNTL+ G +EA + DM SS C P+ T+S +I G+
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM-SSRGCVPNVVTYSVLINGLCKVGR 122
Query: 265 VSEAEAMFNEMLEAGFE--PNLFVLTSLIQCYGKAQRTDDVVRALNRLPE--LGITPD-- 318
+ EA + EM + PN+ S + K T + + L + L ++PD
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182
Query: 319 ------DRFCGC 324
D C C
Sbjct: 183 TFSTLIDGLCKC 194
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D Y EM G+ PN++TYN+++ + +A+ + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVL 257
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ PN TY S++ Y + ++ + ++M G++ V YN+L+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F+ M + +P+ T+ +++ + +G + E + + M+ G PN +V
Sbjct: 318 GRCTEARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y K + D + +++ + G+ PD G ++ ++ ++ + E
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK +D R + PN +STLI Y AG D + M ++G+KP+ +TYN L
Sbjct: 499 EKLFDLMVR---IGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ + R +++EM +G+SP+ TY +L+ + R +Y + E G
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
QL ++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G+ EA+
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAK 674
Query: 270 AMFNEMLEAGFEPNL 284
+F + G P++
Sbjct: 675 DLFAALSANGLVPDV 689
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 7/260 (2%)
Query: 59 HSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLY 118
HS + P T +S Y+ N + A K+ +D+ + + + + TL++ Y
Sbjct: 296 HSDGVE-PDVVTYNSLMDYLCKNGRCTEARKM----FDSMTK-RGLKPEITTYGTLLQGY 349
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW 178
T G + + M G+ PN ++ L+ + + Q ++ +M GL+P+
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
TY +++ ++ ED + + +M ++ + +YN+L+ D+A E+ +
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
M C D+ F+S+I G+V E+E +F+ M+ G +PN+ ++LI Y A
Sbjct: 470 MLDRGICL-DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAG 528
Query: 299 RTDDVVRALNRLPELGITPD 318
+ D+ + L + +G+ PD
Sbjct: 529 KMDEATKLLASMVSVGMKPD 548
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 104 WRIDPNAFSTLIK-LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+R+D AF+ L+K L D V M +G PN+ +YN LL + R +
Sbjct: 122 FRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEA 181
Query: 163 KTIYKEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + M D+G P+ +Y +++ + + + Y EM ++G+ +V YN+++
Sbjct: 182 LELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSII 241
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
A D+A E+ M + P+ T++S++ G+ EA +M G
Sbjct: 242 AALCKAQAMDKAMEVLTSMVKN-GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
EP++ SL+ K R + + + + + G+ P+ G LL
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 131 YEEMKAIG---VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
Y M G V PN+ TY L+ + A R + G + + LL+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 188 YGRARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENC 245
+ D + V R M + G +V YN LL D + EA E+ + M +C
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD +++++I G + +A ++EML+ G PN+ S+I KAQ D +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAME 255
Query: 306 ALNRLPELGITPDDRFCGCLLN--VMTQTPKEELGKL 340
L + + G+ P+ R +++ + PKE +G L
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM G+ + I +N+++D+ + R + + ++ M G+ PN TY++L+ Y A
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAG 528
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ + M GM+ YNTL+ + ++A +F +M+SS PD T+
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS-GVSPDIITY 587
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ ++ + + A+ ++ + E+G + L ++ K TD+ +R L
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
>gi|356575428|ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 562
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 42/290 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I ++ AG+++ + +M +G++ +TYN+L+ K +V IY
Sbjct: 243 DQKMFNMMIYMHKKAGSYEKARKTFAQMAELGIQQTTVTYNSLMSFETNYK---EVSNIY 299
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M L P+ +YA L+ AYG+AR E+ L+V+ EM + G++ + YN LL +
Sbjct: 300 DQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFSIS 359
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF- 285
G ++A +F+ M+ PD ++++M++ + AE F +++ GFEPN+
Sbjct: 360 GMVEQAQTVFKSMRRDRYF-PDLCSYTTMLSAYINADDMEGAEKFFKRLIQDGFEPNVVT 418
Query: 286 ----------------------------------VLTSLIQCYGKAQRTDDVVRALNRLP 311
+LT+++ YGK+ D V +
Sbjct: 419 YGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEME 478
Query: 312 ELGITPDDRFCGCLLNVM-TQTPKEELGKLVECVEKSNS--KLGYVVKLL 358
GI PD + LL++ T +EE +LV +++S K+ +VKL+
Sbjct: 479 SNGIPPDQKAKNVLLSLAKTDEEREEANELVVHFSENSSLPKVNGIVKLV 528
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F LI YG G+F+G V M G PN+++ L++ G+ R +
Sbjct: 132 WDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVVSQTALMEAYGKGGRYNNAE 191
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
I++ M G P+ TY +L+ + + R E+ + ++ ++N ++
Sbjct: 192 AIFRRMQKWGPEPSAFTYQIILKTFVQGNKFREAEELFDNLLNDENSPLKPDQKMFNMMI 251
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
M G ++A + F M + Q + T++S+++ + +VS ++++M A
Sbjct: 252 YMHKKAGSYEKARKTFAQM-AELGIQQTTVTYNSLMSFETNYKEVSN---IYDQMQRADL 307
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
P++ L+ YGKA+R ++ + + + GI P + LL+ +
Sbjct: 308 RPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFS 357
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 65/136 (47%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R +++ D +++T++ Y A + +G ++ + G +PN++TY L+ +
Sbjct: 373 RRDRYFPDLCSYTTMLSAYINADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDL 432
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
V Y+EM G+ N +++ AYG++ + + ++EM+ G+ N L
Sbjct: 433 EMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVL 492
Query: 220 LAMCADVGYTDEAFEI 235
L++ +EA E+
Sbjct: 493 LSLAKTDEEREEANEL 508
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L++ Y G+ G V+E M GVK + ++YN L+D GRA + IY
Sbjct: 275 DIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIY 334
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G P ++ LL A+ +A D + R ++ G++ ++N+LL +
Sbjct: 335 DSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNS 394
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+ ++E M+ S C+PD T +++I + + G + AE +FN + GF P++
Sbjct: 395 GRMDKMESLYESMQGSV-CKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMS 453
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
TSL+ Y K + V ++ G PD LL+
Sbjct: 454 WTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLS 494
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 133/307 (43%), Gaps = 39/307 (12%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV-KTIYKE 168
+F+ L+ Y G + V EMK P ++TYN L+ + ++ WQ+ + +++E
Sbjct: 138 SFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSG-SWQLAEDVFRE 196
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK--------------------- 207
M + G+ P NT+ ++ YG+A + +++ M++
Sbjct: 197 MQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGN 256
Query: 208 --------------GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
G + YN LL + G+ A E+FE M + + D +++
Sbjct: 257 CVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEA-GVKADHVSYN 315
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I G +S+A+A+++ M + GF+P + L+ + KA R D + RL +
Sbjct: 316 ILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESM 375
Query: 314 GITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEA 372
G+ PD LL + + +++ L E ++ S K + L +G + + A
Sbjct: 376 GVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERA 435
Query: 373 TELFNSI 379
E+FNS+
Sbjct: 436 EEIFNSL 442
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 7/226 (3%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
N F+ +I +YG A + ++++ M+ P++ TY L++ R + + I+ E
Sbjct: 207 NTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAE 266
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ G P+ TY +LL AY R + V+ M E G++ YN L+ G
Sbjct: 267 LQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGL 326
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSC---RGKVSEAEAMFNEMLEAGFEPNLF 285
+A I++ MK +P T S I + S G+V++AE + G EP+ F
Sbjct: 327 ISDAQAIYDSMKKV-GFKP---TMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTF 382
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ SL+ YG + R D + + PD L+NV Q
Sbjct: 383 MFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQ 428
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 103/227 (45%), Gaps = 7/227 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y+ + ++ D F+ L+ YG + N + MK P ++N L+
Sbjct: 88 YEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYS 147
Query: 155 RAKRPWQVKTIYKEMTDNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
R + + + + EM ++ SP +NTY +L G + ED V+REM+ +G+
Sbjct: 148 RGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAED---VFREMQNRGVPP 204
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+V + ++ + ++ +A +F+ M+ + C P +T++++I + G AE +
Sbjct: 205 AVNTFTLMINIYGKAHHSAKAEHLFQSMRKAL-CPPSLFTYTALINAHAREGNCVRAEEI 263
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F E+ GF P+++ +L++ Y + + E G+ D
Sbjct: 264 FAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKAD 310
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 2/195 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+ D +++ LI +G AG +Y+ MK +G KP M ++ LL +A R +
Sbjct: 308 KADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAEN 367
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ + G+ P+ + SLL AYG + + S+Y M+ + + NTL+ + A
Sbjct: 368 FVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYA 427
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
GY + A EIF ++ S+ PD +++S++ S R + +++ +ML AG P+
Sbjct: 428 QGGYIERAEEIFNSLE-SKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDR 486
Query: 285 FVLTSLI-QCYGKAQ 298
L+ C G Q
Sbjct: 487 ATAKVLLSSCRGPEQ 501
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 69 KTGSSP--KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNF 124
K G P KS+I + +A ++ + R R E ++P+ F ++L+ YG +G
Sbjct: 339 KVGFKPTMKSHILLLSAFVKAGRVTDAENFVR-RLESMGVEPDTFMFNSLLGAYGNSGRM 397
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D ++YE M+ KP++IT N L++ + + + I+ + G +P+ ++ SL
Sbjct: 398 DKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSL 457
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
+ AY + + +SVY++M G LL+ C E ++ E +
Sbjct: 458 MGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSSCRGPEQVKEVTDMIETQR 513
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D + +S LI Y AG ++ V +EM+A GV+PN ++ +L + R + WQ +
Sbjct: 360 DEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASY-RDRGKWQKSFQV 418
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM ++G+SP+ + Y ++ +G+ + L+ + M+ +G+Q +NTL+
Sbjct: 419 LREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCK 478
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G+ ++A E+FE M+ S C P + T++ MI + + + + + +M G N+
Sbjct: 479 SGHHNKAEELFEAMQES-GCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVV 537
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R D + L + +G+ P L+N Q
Sbjct: 538 TYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQ 583
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 129/268 (48%), Gaps = 4/268 (1%)
Query: 70 TGSSPKSYIWVNPKSPRASKLK-EKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDG 126
+G P SY++ + + K +KS+ RN D + ++ +I +G D
Sbjct: 390 SGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDH 449
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
L ++ M+ GV+P+ +T+N L+D ++ + + +++ M ++G SP TY ++
Sbjct: 450 ALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMIN 509
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
++G ED ++ +M+ +G+ +V Y TL+ + G +A E E MKS +
Sbjct: 510 SFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSV-GLK 568
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P S ++++I + RG +A F M G +P++ VL SLI +G+ +R +
Sbjct: 569 PSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSV 628
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPK 334
L + E + PD L+ + + K
Sbjct: 629 LQYMKENDLKPDVVTYTTLMKALIRVEK 656
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 5/237 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ L+K Y G+ ++ EM+ G P+ TY+ L+D A R + + KEM
Sbjct: 328 AYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEM 387
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+G+ PN ++ +L +Y + + V REM+ G+ YN ++
Sbjct: 388 EASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCL 447
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A F+ M+ E QPD+ T++++I C C+ G ++AE +F M E+G P
Sbjct: 448 DHALATFDRMR-MEGVQPDAVTWNTLID-CHCKSGHHNKAEELFEAMQESGCSPCTTTYN 505
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+I +G+ +R +DV L ++ G+ + L+++ Q+ + +EC+E
Sbjct: 506 IMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGR--FKDAIECLE 560
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 1/223 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R E + D ++TLI + +G+ + ++E M+ G P TYN ++++ G +
Sbjct: 456 RMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQE 515
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R VKT+ +M GL N TY +L+ YG++ +D + MK G++ S T+YN
Sbjct: 516 RWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYN 575
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G +++A F M+ ++ +P +S+I + +EA ++ M E
Sbjct: 576 ALINAYAQRGLSEQAINAFRVMR-ADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKE 634
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+P++ T+L++ + ++ D V + G TPD +
Sbjct: 635 NDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRK 677
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 29/307 (9%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
+I G AG + ++EE+K G+ P YN LL + ++I EM +G
Sbjct: 297 VITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG 356
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
SP+ +TY+ L+ AY A E V +EM+ G++ + +++ +LA D G ++F
Sbjct: 357 FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSF 416
Query: 234 EIFEDMKSSENCQPDSWTFSSMITI---CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
++ +M++S PD ++ MI C+C + A A F+ M G +P+ +L
Sbjct: 417 QVLREMRNS-GVSPDRHFYNVMIDTFGKCNC---LDHALATFDRMRMEGVQPDAVTWNTL 472
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE---------LGKLV 341
I C+ K+ + + E G +P C N+M + E+ LGK+
Sbjct: 473 IDCHCKSGHHNKAEELFEAMQESGCSP----CTTTYNIMINSFGEQERWEDVKTLLGKM- 527
Query: 342 ECVEKSNSKLGYVVKL--LLEEQDIEGDFKK--EATELFNSISKDVKKAYCNCLIDLCVN 397
+S L VV L++ G FK E E+ S+ N LI+
Sbjct: 528 ----QSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQ 583
Query: 398 LNLLENA 404
L E A
Sbjct: 584 RGLSEQA 590
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 11/269 (4%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL--SVY 201
+TYN L+ R + + M +G ++ Y+ ++++ R + ++ +Y
Sbjct: 185 LTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 244
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
E++ ++L L N ++ A G + A F M P + T ++IT
Sbjct: 245 AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMS-FLAMVQGNGLSPKTATLVAVITALGN 303
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ EAEA+F E+ E G P +L++ Y K D ++ + G +PD+
Sbjct: 304 AGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHT 363
Query: 322 CGCLLNVMTQTPKEELGKLV-ECVEKSNSKL-GYVVKLLLEEQDIEGDFKKE---ATELF 376
L++ + E ++V + +E S + YV +L G ++K E+
Sbjct: 364 YSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMR 423
Query: 377 NS-ISKDVKKAYCNCLIDLCVNLNLLENA 404
NS +S D + + N +ID N L++A
Sbjct: 424 NSGVSPD--RHFYNVMIDTFGKCNCLDHA 450
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++LI +G +V + MK +KP+++TY L+ + R ++ +V +Y+EM
Sbjct: 608 VLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEM 667
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTL 198
T +G +P+ A L A RY E TL
Sbjct: 668 TLSGCTPDRKARAMLRSAL---RYMERTL 693
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 113/224 (50%), Gaps = 12/224 (5%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R+ R+ P+ FSTLI G D +V+++M A G PN+ITYN L++ + +A
Sbjct: 350 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 409
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + + + M D G++P+ TY+ L+ A+ +A ++ L + M +G +V +N
Sbjct: 410 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 469
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+++ + EAF++F+DM PD T+ ++I G+ +AEA+ + M
Sbjct: 470 SIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP- 528
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRAL---NRLPELGITPD 318
+P+ + C + DV RAL NR+ EL + PD
Sbjct: 529 ---DPDTYAFNC---CINGLSKLGDVSRALQVYNRMLELELVPD 566
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 9/221 (4%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R+ R+ P+ FSTLI G D NV+++M A G PN++TYN L++ + +
Sbjct: 844 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTD 903
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + + + M D G++P+ TY+ L+ A+ +A + ++ L + M +G +V +N
Sbjct: 904 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFN 963
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+++ + EAF++F+DM PD T+ ++I G +AE + + M
Sbjct: 964 SIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP- 1022
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P+ + C + DV RAL+R+ EL + PD
Sbjct: 1023 ---DPDTYAFNC---CINGLSKLGDVSRALHRMLELELVPD 1057
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 111/224 (49%), Gaps = 13/224 (5%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I + + ++EE+ G P+++TYN L+D++ +A + + ++ +M+
Sbjct: 219 YNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 278
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL--SVTLYNTLLAMCADVGY 228
PN TY+ L+ + ++ + +EM K + ++ YN+ L
Sbjct: 279 SRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 338
Query: 229 TDEAFEIFEDMK-SSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
T EA E+ ++ S PD+ TFS++I +C C G++ EA ++F++M+ G+ PN+
Sbjct: 339 TAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC-GQIDEACSVFDDMIAGGYVPNVIT 397
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
+L+ KA + + + + + G+TPD D FC
Sbjct: 398 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 441
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W D ++ L+ +G + + V EEM G P+++TYN L+D++ +A + +
Sbjct: 703 WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR 762
Query: 164 TIYKEMT---DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL--SVTLYNT 218
++ +M+ PN TY+ L+ + ++ + +EM K + ++ YN+
Sbjct: 763 RLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNS 822
Query: 219 LLAMCADVGYTDEAFEIFEDMK-SSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEML 276
L EA E+ ++ S PD+ TFS++I +C C G+ EA +F++M+
Sbjct: 823 FLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC-GQTDEACNVFDDMI 881
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
G+ PN+ L+ K + + + + + G+TPD D FC
Sbjct: 882 AGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 935
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F LI AG + ++ + M +GV PN++TYN L+ + ++ R +
Sbjct: 601 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 660
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM +G P+ TY SL+ A RA +D L + E+K G YN L+
Sbjct: 661 EEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKS 720
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM---LEAGFEPN 283
G T++A + E+M + PD T++++I G + EA + +M + PN
Sbjct: 721 GQTEQAITVLEEMVGKGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPN 779
Query: 284 LFVLTSLIQCYGKAQRTDD 302
+ + LI K R D+
Sbjct: 780 VVTYSVLINGLCKVGRIDE 798
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 107 DPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ AF+ I G+ L VY M + + P+ +T+N L+ +A Q
Sbjct: 529 DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASA 588
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM L P+ T+ +L+ +A E + M G+ +V YN L+
Sbjct: 589 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 648
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA + E+M SS C PDS T+ S++ + +A + +E+ G++P+
Sbjct: 649 KSGRIEEACQFLEEMVSS-GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 707
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ K+ +T+ + L + G PD
Sbjct: 708 VTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 88 SKLKEKSYDTRARNEKWRI----DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
SKL + S + N + D F+ LI AGNF+ ++EEM A ++P++
Sbjct: 543 SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+T+ L+D + +A + + I M + G+ PN TY +L+ ++ E+ E
Sbjct: 603 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 662
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M G Y +L+ TD+A ++ ++KS PD+ T++ ++ G
Sbjct: 663 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF-GWDPDTVTYNILVDGLWKSG 721
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+ +A + EM+ G P++ +LI KA ++ R
Sbjct: 722 QTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARR 763
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 8/218 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEM--KAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
PN +S LI G D + +EM K+ V PN+ITYN+ LD + + +
Sbjct: 778 PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEAC 837
Query: 164 TIYKEMTDNGL--SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ + + D L SP+ T+++L+ + ++ +V+ +M G +V YN L+
Sbjct: 838 ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMN 897
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ A + E M + PD T+S ++ V EA + + M G
Sbjct: 898 GLCKTDKMERAHAMIESM-VDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT 956
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLP-ELGITPD 318
PN+ S+I K+ ++ + + + + + G+ PD
Sbjct: 957 PNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPD 994
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKR 158
R K R+ P+ + + L GN + Y+ A+ G K + ++N L+ + ++
Sbjct: 69 RGCKGRLHPSVAAAI--LAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGS 126
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRA-YGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
P + +++ PN TY++LLRA Y E TL +R ++ SV YN
Sbjct: 127 PAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSS--SRSVADYN 184
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L G T A EIF + + P T++++I ++ +F E++E
Sbjct: 185 IVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVE 244
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
G P++ +LI KA ++ R
Sbjct: 245 RGHHPDVVTYNTLIDSLCKAGDLEEARR 272
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +S L+ Y AG ++ + +EM+A GVKP+ ++ +L R + WQ +
Sbjct: 326 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGEWQKAFAV 384
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ + Y ++ +G+ + + M+E+G++ V +NTL+
Sbjct: 385 LREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCK 444
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A E+F++M+ S NC + T++ MI + + EAM EM E G PN+
Sbjct: 445 GGRHDRAIELFDEMRES-NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNII 503
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R + V + + G+ P L+N Q
Sbjct: 504 TYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQ 549
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R E D ++TLI + G D + +++EM+ TYN +++ +G +
Sbjct: 422 RMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQ 481
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R V+ + EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 482 RWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYH 541
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G D A + + M+ ++ + + +S+I +++EA ++ M E
Sbjct: 542 ALVNAYAQRGLADHALNVVKAMR-ADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 600
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
G P++ T+L++ + ++ + V + G PD +
Sbjct: 601 NGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRK 643
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + ++ +I +G ++ ++ M+ G++P+++T+N L+D + R +
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM ++ TY ++ G + E ++ EMKE+G+ ++ Y TL+ +
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA + E MK ++ +P + +++ + RG A + M G E +
Sbjct: 514 RSGRFKEAVDCIEAMK-ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST 572
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
VL SLI +G+ +R + L + E G+ PD
Sbjct: 573 VVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPD 606
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 10/271 (3%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R++P+A FS LI + A D L + +AIG+ P L+ ++G A+R +
Sbjct: 216 RLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEA 275
Query: 163 KTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ ++ E G + P Y +LL+ Y + ++ V EM + G+ Y+ L+
Sbjct: 276 EALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVD 335
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G + A + ++M+ ++ +P S+ FS ++ RG+ +A A+ EM +G
Sbjct: 336 AYTRAGRWESARILLKEME-ADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVR 394
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KL 340
P+ +I +GK + A +R+ E GI PD L++ + + + +L
Sbjct: 395 PDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIEL 454
Query: 341 VECVEKSNSKLG-----YVVKLLLEEQDIEG 366
+ + +SN LG ++ LL EEQ EG
Sbjct: 455 FDEMRESNCPLGTTTYNIMINLLGEEQRWEG 485
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 48/290 (16%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMT---DNGLSPNWNTYASLLRAYGRARYGEDT 197
P++ +Y++LL + + P + + + + ++ L P+ ++ L+ A+ RAR +
Sbjct: 181 PDLASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAA 240
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
L LLA +G T P S +++I+
Sbjct: 241 LE-------------------LLASAQAIGLT-----------------PRSNAVTALIS 264
Query: 258 ICSCRGKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+V+EAEA+F E AG +P +L++ Y K + + L+ + + G+
Sbjct: 265 SLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVA 324
Query: 317 PDDRFCGCLLNVMTQTPKEELGK-LVECVEKSNSKL-GYVVKLLLEEQDIEGDFKKEATE 374
PD+ L++ T+ + E + L++ +E K YV +L G+++K
Sbjct: 325 PDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAV 384
Query: 375 LFNSISKDVK--KAYCNCLIDLCVNLNLLENAC----KLLELGLTLEVYT 418
L + V+ + + N +ID N L +A ++ E G+ +V T
Sbjct: 385 LREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVT 434
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++LI +G +V + MK G++P++ITY L+ + R ++ +V IY+EM
Sbjct: 575 LNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMI 634
Query: 171 DNGLSPNWNTYASL 184
+G +P+ A L
Sbjct: 635 TSGCAPDRKARAML 648
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +S L+ Y AG ++ + +EM+A GVKP+ ++ +L R + WQ +
Sbjct: 326 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGEWQKAFAV 384
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ + Y ++ +G+ + + M+E+G++ V +NTL+
Sbjct: 385 LREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCK 444
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A E+F++M+ S NC + T++ MI + + EAM EM E G PN+
Sbjct: 445 GGRHDRAIELFDEMRES-NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNII 503
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R + V + + G+ P L+N Q
Sbjct: 504 TYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQ 549
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R E D ++TLI + G D + +++EM+ TYN +++ +G +
Sbjct: 422 RMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQ 481
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R V+ + EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 482 RWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYH 541
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G D A + + M+ ++ + + +S+I +++EA ++ M E
Sbjct: 542 ALVNAYAQRGLADHALNVVKAMR-ADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 600
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G P++ T+L++ + ++ + V + G PD
Sbjct: 601 NGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPD 641
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + ++ +I +G ++ ++ M+ G++P+++T+N L+D + R +
Sbjct: 394 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 453
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM ++ TY ++ G + E ++ EMKE+G+ ++ Y TL+ +
Sbjct: 454 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 513
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA + E MK ++ +P + +++ + RG A + M G E +
Sbjct: 514 RSGRFKEAVDCIEAMK-ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST 572
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
VL SLI +G+ +R + L + E G+ PD
Sbjct: 573 VVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPD 606
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 10/271 (3%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R++P+A FS LI + A D L + +AIG+ P L+ ++G A+R +
Sbjct: 216 RLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEA 275
Query: 163 KTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ ++ E G + P Y +LL+ Y + ++ V EM + G+ Y+ L+
Sbjct: 276 EALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVD 335
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G + A + ++M+ ++ +P S+ FS ++ RG+ +A A+ EM +G
Sbjct: 336 AYTRAGRWESARILLKEME-ADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVR 394
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KL 340
P+ +I +GK + A +R+ E GI PD L++ + + + +L
Sbjct: 395 PDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIEL 454
Query: 341 VECVEKSNSKLG-----YVVKLLLEEQDIEG 366
+ + +SN LG ++ LL EEQ EG
Sbjct: 455 FDEMRESNCPLGTTTYNIMINLLGEEQRWEG 485
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 116/262 (44%), Gaps = 13/262 (4%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDT---LSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ P+ +Y+ LL + R D + +++E ++ L++ L++ A
Sbjct: 174 LREHSFLPDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISAFAR 233
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
D A E+ ++ P S +++I+ +V+EAEA+F E AG +P
Sbjct: 234 ARLPDAALELLASAQAI-GLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRT 292
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVEC 343
+L++ Y K + + L+ + + G+ PD+ L++ T+ + E + L++
Sbjct: 293 RAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 352
Query: 344 VEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISKDVK--KAYCNCLIDLCVNLNL 400
+E K YV +L G+++K L + V+ + + N +ID N
Sbjct: 353 MEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNC 412
Query: 401 LENAC----KLLELGLTLEVYT 418
L +A ++ E G+ +V T
Sbjct: 413 LGHAMDAFDRMREEGIEPDVVT 434
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++LI +G +V + MK G++P++ITY L+ + R ++ +V IY+EM
Sbjct: 575 LNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMI 634
Query: 171 DNGLSPNWNTYASL 184
+G +P+ A L
Sbjct: 635 TSGCAPDRKARAML 648
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 10/266 (3%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ GV+ ++ T N L+ G V+ + + L N TY LL+A+ R+
Sbjct: 1 MERCGVRGSISTINILIGIFGGGA---DVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNN 57
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
VY E++ +G +L + YN LL A D+ + +F+DMK ++C+PD +T++
Sbjct: 58 SNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKR-KHCEPDEYTYT 116
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
MI + GK E+ +F EM E G+ PNL ++IQ + D + +++ E
Sbjct: 117 IMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVEN 176
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT 373
P+ +LNV+ + +LG+L E VE SN + + L + EA
Sbjct: 177 NCRPNGFTFSVILNVL--VAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAH 234
Query: 374 ELFNSI----SKDVKKAYCNCLIDLC 395
LF ++ + + AY + L LC
Sbjct: 235 RLFCNMWSFHDEGDRDAYMSMLESLC 260
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 116/235 (49%), Gaps = 5/235 (2%)
Query: 88 SKLKEKSYDTRARNEKWRI----DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
SKL S R W D +A+ ++++ AG L++ ++ + +
Sbjct: 225 SKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDT 284
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ YN +L +G+ K+ + +Y++M +G SP+ +Y L+ ++GRA E+ + ++ E
Sbjct: 285 VMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEE 344
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
++ + + +N+L+ G DEA F++M+ E PD T+S++I
Sbjct: 345 LENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMR-EEGLSPDVVTYSTLIECFGKTD 403
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
KV A +F+EML G PN+ L+ C ++ RT + V +L + G+TPD
Sbjct: 404 KVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 458
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 43/273 (15%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW + N ++ L++ + + N + VY E++ G K ++ YN LLD + + +
Sbjct: 34 KKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKV 93
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
QV ++K+M P+ TY ++R G+ +++L++++EM EKG ++ YNT+
Sbjct: 94 DQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTM 153
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV-------------- 265
+ A+ D+ +F M + NC+P+ +TFS ++ + G++
Sbjct: 154 IQALANNRMVDKTIFLFSKMVEN-NCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFM 212
Query: 266 ------------------SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
SEA +F M E + S+++ A +T + + L
Sbjct: 213 NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLL 272
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+++ E I+ D VM T LGKL
Sbjct: 273 SKIHEKRISTD--------TVMYNTVLSALGKL 297
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 124/284 (43%), Gaps = 34/284 (11%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R +++D A++ L+ D V+++MK +P+ TY ++ G+ +
Sbjct: 69 RRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKA 128
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-----KGMQLSVT 214
+ T+++EMT+ G +PN Y ++++A R + T+ ++ +M E G SV
Sbjct: 129 DESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVI 188
Query: 215 L---------------------------YNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
L Y L+ + +G+ EA +F +M S + +
Sbjct: 189 LNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHD-EG 247
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D + SM+ GK +EA + +++ E + + +++ GK ++T D+
Sbjct: 248 DRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLY 307
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSK 350
++ + G +PD L++ + + EE K+ E +E S+ K
Sbjct: 308 EKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCK 351
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ LI ++G + + C ++ +K ++ N TY LL R+ + +Y E+
Sbjct: 13 INILIGIFGGGADVERCFDL---VKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELR 69
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G + Y LL A + + V+++MK K + Y ++ M +G D
Sbjct: 70 RRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKAD 129
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF---VL 287
E+ +F++M + + P+ +++MI + V + +F++M+E PN F V+
Sbjct: 130 ESLTLFQEM-TEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVI 188
Query: 288 TSLIQCYGKAQRTDDVVRALNRL 310
+++ G+ R D+VV N+
Sbjct: 189 LNVLVAEGQLGRLDEVVEVSNKF 211
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R E D +STLI+ +G + +++EM A G PN++TYN LLD + R+ R
Sbjct: 381 REEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRT 440
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ +Y ++ GL+P+ TYA L R
Sbjct: 441 AEAVDLYAKLKQQGLTPDSITYAVLER 467
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N + D +F++LI G G+ D ++EM+ G+ P+++TY+ L++ G+ +
Sbjct: 347 NSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVE 406
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ EM G SPN TY LL R+ + + +Y ++K++G+ Y L
Sbjct: 407 MACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 465
>gi|302143554|emb|CBI22115.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + + +I +G D +++EMK ++P+ + + +L+D+MG+A R +
Sbjct: 230 LDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKV 289
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM GL P+ Y SL+ ++ +A E L ++ EMK+ G + + LY ++ A
Sbjct: 290 YMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAK 349
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A +F DM+ + P T+S ++ + S G+V A ++N M AG P L
Sbjct: 350 SGKLETAMSVFSDMEKA-GFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLS 408
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+L+ + D + L + +G + D
Sbjct: 409 TYTALLTLLANKKLVDVAAKVLLEMKAMGFSVD 441
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+++++ G K + TYN+L+ P++ +Y+ M G + +TY ++ + +
Sbjct: 185 FKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAK 244
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ + +++EMKEK ++ S ++ +L+ G D + +++ +M+ +P +
Sbjct: 245 SGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGF-GLRPSAT 303
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ S+I GK+ A +++EM +AGF PN + T +++ + K+ + + + + +
Sbjct: 304 MYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDM 363
Query: 311 PELGITPDDRFCGCLLNV 328
+ G P CLL +
Sbjct: 364 EKAGFLPTPSTYSCLLEM 381
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 17/287 (5%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
++I N ++ + +A++ +K++ D+G + TY SL+ + VY
Sbjct: 161 SVIACNQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVY 220
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
M+ G L + Y ++ A G D AF++F++MK +N +P F+S++
Sbjct: 221 ESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMK-EKNLRPSFLVFASLVDSMGK 279
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G++ + ++ EM G P+ + SLI+ + KA + + +R + + + G P+
Sbjct: 280 AGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGL 339
Query: 322 CGCLLNVMTQTPKEELGKLVECVEKSNSKLGYV-----VKLLLEEQDIEGDFKKEATELF 376
++ ++ K E V K G++ LLE G A +L+
Sbjct: 340 YTMVVESHAKSGKLETAM---SVFSDMEKAGFLPTPSTYSCLLEMHSASGQV-DSAMKLY 395
Query: 377 NSISKDVKK---AYCNCLIDLCVNLNLLENACKLL----ELGLTLEV 416
NS++ + + L+ L N L++ A K+L +G +++V
Sbjct: 396 NSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDV 442
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 173/407 (42%), Gaps = 43/407 (10%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +S L+ LYG G +D ++ +MK +P+ TYN L+ G +V T+
Sbjct: 357 PNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ D + PN TY L+ A G+ ED + M KG+ S Y+ L+
Sbjct: 417 FHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQ 476
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA F M + T++S+I + G E EA+ + M E G N
Sbjct: 477 AALYDEALVAFNTMNEV-GSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAK 535
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKL 340
+ +I+ Y ++ + ++ ++A + ++ D++ +L V + KE+ ++
Sbjct: 536 SFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEI 595
Query: 341 --------VEC------VEKSNSKLGYVVKLLLE-------------EQDIEGDFKKEAT 373
V C V N + +LL E Q I+GD+ ++
Sbjct: 596 KASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSN 655
Query: 374 -----ELFNSISKD---VKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSP 425
+F+ ++ + + N L++ L A ++L ++ ++ +S
Sbjct: 656 WQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRQSK 715
Query: 426 TQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHG 472
WS+ + + G A TA+ +W+N +++ L GE+ P L + G G
Sbjct: 716 LVWSVDVHRMWEGGAYTAVSLWVNKMNEMLMDGEDLPQLAAVVVGRG 762
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 119/230 (51%), Gaps = 4/230 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNN 148
E S + R ++ R+ PN ++T+I +++G L ++ EM+ GV+P+++TYN
Sbjct: 200 ETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNT 259
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
LL + + ++K M + G+ P TY+ ++ +G+ E + +EM+ +G
Sbjct: 260 LLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEG 319
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ YN L+ A +G EA ++F+ M+++ C P++ T+S ++ + G+ +
Sbjct: 320 YLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAA-GCVPNASTYSILLNLYGKHGRYDDV 378
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F +M E+ EP+ LI+ +G+ +VV + L + I P+
Sbjct: 379 RELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPN 428
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 5/219 (2%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K R+ N FS + K + G++ L +++ M + I KPN Y ++ +GR +
Sbjct: 107 KNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEK 166
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
I+ EM G+ + +Y +L+ AYGR E +L + MK + + ++ YNT++
Sbjct: 167 CSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVIN 226
Query: 222 MCA--DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
CA D+ + + +F +M+ E QPD T++++++ C+ RG EAE +F M+E G
Sbjct: 227 ACARGDLDW-EGLLGLFAEMR-HEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGG 284
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P + + +++ +GK + + V L + G PD
Sbjct: 285 IVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPD 323
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 143/307 (46%), Gaps = 6/307 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+ + ++ +I L G G + C +++EM + GV ++ +Y L++ GR + +
Sbjct: 147 NEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL 206
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +SPN TY +++ A R E L ++ EM+ +G+Q + YNTLL+ CA
Sbjct: 207 ERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAA 266
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA +F+ M P+ T+S ++ GK+ + + EM G+ P++
Sbjct: 267 RGLGDEAEMVFKTMIEG-GIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDIS 325
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
LI+ + K + + ++ G P+ LLN+ + + +++ +L +
Sbjct: 326 SYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQM 385
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI---SKDVKKAYCNCLIDLCVNLNLL 401
++S+++ +L EG + KE LF+ + + D L+ C L
Sbjct: 386 KESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLH 445
Query: 402 ENACKLL 408
E+A K+L
Sbjct: 446 EDAKKIL 452
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+E + D ++++ LI+ + G+ ++V+++M+A G PN TY+ LL+ G+ R
Sbjct: 317 SEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYD 376
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
V+ ++ +M ++ P+ TY L+R +G Y ++ ++++ ++ ++ + ++ Y L+
Sbjct: 377 DVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV 436
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
C G ++A +I M + + P S +S +I EA FN M E G
Sbjct: 437 FACGKGGLHEDAKKILFHM-NGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGS 495
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGK 339
+ + SLI + + + L+R+ E GI+ + + F G + EE K
Sbjct: 496 KSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIK 555
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEG 366
+EK ++ L+EQ +EG
Sbjct: 556 AFVEMEK--------MRCELDEQTLEG 574
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 6/227 (2%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRP 159
+I PN F+T+I G + +V ++MK G PN++TYN L+D MGR +
Sbjct: 225 KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKM 284
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ I KEM +N +SPN T+ L+ + + L V+ EM+ +G++ +V YN+L
Sbjct: 285 YKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL 344
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G +EA + ++M SS N +P+ T++++I + + EA +F+ + + G
Sbjct: 345 VNGLCNEGKLNEAKVLLDEMLSS-NLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
PN+ +L+ Y K + ++ + E G P+ CL+
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLI 450
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 3/225 (1%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
++ PN+ F+ LI + N L V+EEM++ G+KP ++TYN+L++ + + +
Sbjct: 298 KVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEA 357
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
K + EM + L PN TY +L+ Y + + E+ ++ + ++G+ +V +NTLL
Sbjct: 358 KVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHG 417
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G +EAF + + + + P++ T++ +I GK+ E + + NEM G +
Sbjct: 418 YCKFGKMEEAF-LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKA 476
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ LI + + + R ++ + + G+ P LLN
Sbjct: 477 DTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLN 521
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 113/225 (50%), Gaps = 6/225 (2%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA + ++++ + + L+ F G VY+EM + PN+IT+N +++ + +
Sbjct: 185 RAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVG 244
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVT 214
+ + + +M G PN TY +L+ Y GR ++ +EM E + +
Sbjct: 245 KLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSV 304
Query: 215 LYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+N L+ C D + A ++FE+M+ S+ +P T++S++ GK++EA+ + +
Sbjct: 305 TFNVLIDGFCKDENLS-AALKVFEEMQ-SQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLD 362
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EML + +PN+ +LI Y K + ++ + + + G+TP+
Sbjct: 363 EMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 40/179 (22%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++ LI + G + N+ EM+ GVK + +TYN L+ K P + +
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM D GL P+ TY LL Y L++ ++M+++G +V YN L+
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQ---- 556
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPN 283
GY CR GK+ +A + NEMLE G PN
Sbjct: 557 -GY--------------------------------CRKGKLEDANGLLNEMLEKGLIPN 582
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 124/240 (51%), Gaps = 5/240 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +++LI+ + G + +Y EM +G P+++ N +D + +A + + +
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E+ + G P+ +Y L+ +A + + ++ MKE+G L YNT++
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A+++ E+MK+ + +P T+ S+I + ++ EA +F E G E N+
Sbjct: 632 SGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +SLI +GK R D+ + L + G+TP+ CLL+ + + EE+ + + C +
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA--EEISEALVCFQ 748
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ I +G AG D + EMKA G+ + +TY +++ + +A R + ++
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M N P Y +++ YG A ED S+ + KG SV YN +L+
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK 388
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA + FE+MK ++ P+ T++ MI + GK+ A + + M +AG PN+
Sbjct: 389 GQVDEALKKFEEMK--KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFCGCLLNVMTQTPKEELGKLVECVE 345
+ ++ KAQR DD L PD +C + + +E KL E +
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
+N VV L + K++ +++N +
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 3/214 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D A++T+I + +G + + EEMK G +P ++TY +++D + + R + +
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E G+ N Y+SL+ +G+ ++ + E+ +KG+ +V +N LL
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNL 284
EA F+ MK + C P+ T+S +I +C R K ++A + EM + GF+PN+
Sbjct: 737 AEEISEALVCFQSMKDLK-CTPNYITYSILIHGLCKIR-KFNKAFVFWQEMQKQGFKPNV 794
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F T++I KA + + E G D
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 123/272 (45%), Gaps = 3/272 (1%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLN 129
G S + I + ++ KL+E ++ R K+R +A++ LI T+ + D L
Sbjct: 162 GPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT 221
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++++M+ +G N+ + L+ R R ++ EM N L P+ Y + +G
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+A + + EMK G+ L Y +++ + +EA E+FE M ++ P +
Sbjct: 282 KAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV-PCA 340
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+ +++MI GK +A ++ G P++ ++ C G+ + D+ ++
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ + I P+ +++++ + K E +V
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVV 431
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+++ ++ +S+LI +G G D + EE+ G+ PN+ T+N LLD + +A+
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M D +PN+ TY+ L+ + R ++EM+++G + +V Y T
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+++ A G EA +FE K DS ++++I S + S+A +F E
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGV-ADSAIYNAIIEGLSNANRASDAYRLFEE 854
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ +I + AG + L V + MK G+ PN+IT N ++D + +A+R +I
Sbjct: 407 PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSI 466
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ + P+ TY SL+ GR ++ +Y +M + + +Y +L+
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++ +I+ +M C PD ++ + G++ + A+F E+ GF P+
Sbjct: 527 CGRKEDGHKIYNEMLRL-GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
T LI KA + + E G D R
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR 620
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 1/203 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A+++L+ + F+ + EEM G P+ T ++ + ++++ + T + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
P ++ Y +L+ A +R + L+++++M+E G ++V L+ TL+ + A G
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D A + ++MKS+ + +PD ++ I GKV A F+EM G + TS
Sbjct: 252 DAALSLLDEMKSN-SLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310
Query: 290 LIQCYGKAQRTDDVVRALNRLPE 312
+I KA R ++ V + +
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQ 333
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L+ A L ++ MK + PN ITY+ L+ + + ++ +
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++EM G PN TY +++ +A + +++ + KEKG +YN ++
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839
Query: 224 ADVGYTDEAFEIFEDMK 240
++ +A+ +FE+ +
Sbjct: 840 SNANRASDAYRLFEEAR 856
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 108 PNAFSTLIKLYGTAG--NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + I ++G F+ ++EM+ G KPN+ TY ++ + +A + T+
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+++ + G + Y +++ A D ++ E + KG
Sbjct: 817 FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 124/240 (51%), Gaps = 5/240 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +++LI+ + G + +Y EM +G P+++ N +D + +A + + +
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E+ + G P+ +Y L+ +A + + ++ MKE+G L YNT++
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A+++ E+MK+ + +P T+ S+I + ++ EA +F E G E N+
Sbjct: 632 SGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +SLI +GK R D+ + L + G+TP+ CLL+ + + EE+ + + C +
Sbjct: 691 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA--EEISEALVCFQ 748
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ I +G AG D + EMKA G+ + +TY +++ + +A R + ++
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M N P Y +++ YG A ED S+ + KG SV YN +L+
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK 388
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA + FE+MK ++ P+ T++ MI + GK+ A + + M +AG PN+
Sbjct: 389 GQVDEALKKFEEMK--KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFCGCLLNVMTQTPKEELGKLVECVE 345
+ ++ KAQR DD L PD +C + + +E KL E +
Sbjct: 447 VNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML 506
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
+N VV L + K++ +++N +
Sbjct: 507 DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 3/214 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D A++T+I + +G + + EEMK G +P ++TY +++D + + R + +
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E G+ N Y+SL+ +G+ ++ + E+ +KG+ +V +N LL
Sbjct: 677 FEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 736
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNL 284
EA F+ MK + C P+ T+S +I +C R K ++A + EM + GF+PN+
Sbjct: 737 AEEISEALVCFQSMKDLK-CTPNYITYSILIHGLCKIR-KFNKAFVFWQEMQKQGFKPNV 794
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F T++I KA + + E G D
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 123/272 (45%), Gaps = 3/272 (1%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLN 129
G S + I + ++ KL+E ++ R K+R +A++ LI T+ + D L
Sbjct: 162 GPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT 221
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++++M+ +G N+ + L+ R R ++ EM N L P+ Y + +G
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+A + + EMK G+ L Y +++ + +EA E+FE M ++ P +
Sbjct: 282 KAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV-PCA 340
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+ +++MI GK +A ++ G P++ ++ C G+ + D+ ++
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ + I P+ +++++ + K E +V
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVV 431
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+++ ++ +S+LI +G G D + EE+ G+ PN+ T+N LLD + +A+
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M D +PN+ TY+ L+ + R ++EM+++G + +V Y T
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+++ A G EA +FE K DS ++++I S + S+A +F E
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGV-ADSAIYNAIIEGLSNANRASDAYRLFEE 854
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ +I + AG + L V + MK G+ PN+IT N ++D + +A+R +I
Sbjct: 407 PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSI 466
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ + P+ TY SL+ GR ++ +Y +M + + +Y +L+
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++ +I+ +M C PD ++ + G++ + A+F E+ GF P+
Sbjct: 527 CGRKEDGHKIYNEMLRL-GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
T LI KA + + E G D R
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR 620
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 1/203 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A+++L+ + F+ + EEM G P+ T ++ + ++++ + T + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
P ++ Y +L+ A +R + L+++++M+E G ++V L+ TL+ + A G
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D A + ++MKS+ + +PD ++ I GKV A F+EM G + TS
Sbjct: 252 DAALSLLDEMKSN-SLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310
Query: 290 LIQCYGKAQRTDDVVRALNRLPE 312
+I KA R ++ V + +
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQ 333
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L+ A L ++ MK + PN ITY+ L+ + + ++ +
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++EM G PN TY +++ +A + +++ + KEKG +YN ++
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839
Query: 224 ADVGYTDEAFEIFEDMK 240
++ +A+ +FE+ +
Sbjct: 840 SNANRASDAYRLFEEAR 856
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 108 PNAFSTLIKLYGTAG--NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + I ++G F+ ++EM+ G KPN+ TY ++ + +A + T+
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+++ + G + Y +++ A D ++ E + KG
Sbjct: 817 FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 101 NEKWR-----------IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+E WR + P +S ++K+ G A + L+V+ ++K P YN L
Sbjct: 141 DEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTL 200
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ + ++ +Y E+ G SP+ TY++L+ A+G+ + ++ EMKE G
Sbjct: 201 ILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENG 260
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ + +Y T+LAM + + A + E+MK + C P +T++ +I G+V +A
Sbjct: 261 LHPTEKIYTTILAMYFKLNKVEAALRLVEEMK-GKGCAPTVFTYTELIKGLGKVGRVDDA 319
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++F ML+ G +P++ ++ +LI G+A R +D ++ ++ L P+
Sbjct: 320 YSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPN 369
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI +G +D +++EMK G+ P Y +L + + +
Sbjct: 229 DTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLV 288
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G +P TY L++ G+ +D S++ M + G + V L N L+ +
Sbjct: 289 EEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRA 348
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A ++F M S + C P+ T++++I I + SEA F +M G P+ F
Sbjct: 349 GRLEDALKLFGKMDSLQ-CAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSF 407
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
LI + K R + + L + E G P
Sbjct: 408 TYAILIDGFCKTNRVEKALLLLEEMDEKGFPP 439
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 22/266 (8%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQ 161
+ +P A ++TLI + G+ + +Y E+ + G P+ ITY+ L+ G+ +R
Sbjct: 189 KCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDF 248
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ EM +NGL P Y ++L Y + E L + EMK KG +V Y L+
Sbjct: 249 AFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIK 308
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
VG D+A+ +F +M + C+PD +++I I G++ +A +F +M
Sbjct: 309 GLGKVGRVDDAYSLFFNM-LKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCA 367
Query: 282 PNLFVLTSLIQCYGKAQR-TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
PN+ ++I+ +++ + ++ GI P L++ +T +
Sbjct: 368 PNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR------ 421
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEG 366
VEK+ LLLEE D +G
Sbjct: 422 ---VEKA--------LLLLEEMDEKG 436
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+E+MKA G+ P+ TY L+D + R + + +EM + G P Y SL+ + GR
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
A+ E +++E+KE + S +Y ++ + G +A ++F + + C PD +
Sbjct: 454 AKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKL-GCSPDVY 512
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++++++ G + EA ++ M E G P++ ++ K + ++
Sbjct: 513 TYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKM 572
Query: 311 PELGITPD 318
E I PD
Sbjct: 573 KESEIMPD 580
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 38/229 (16%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P++F + LI + + L + EEM G P Y +L+D++GRAKR
Sbjct: 402 IAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAAN 461
Query: 164 TIYKEMTDN-----------------------------------GLSPNWNTYASLLRAY 188
+++E+ +N G SP+ TY +L+
Sbjct: 462 ELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGM 521
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
RA ++ S+ R M+E G + +N +L A G A E+F MK SE PD
Sbjct: 522 IRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESE-IMPD 580
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
+ +++++++ S G A + EM GFE + +S+++ GK
Sbjct: 581 AVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKV 629
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R ++ +IK +G G ++++ E + +G P++ TYN L+ M RA + +
Sbjct: 473 RSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHS 532
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ + M +NG +P+ ++ +L + + + ++ +MKE + YNT+L+ +
Sbjct: 533 LMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLS 592
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G + A ++ +MK + + DS T+SS I GKV E
Sbjct: 593 RAGMFEMAAKLMREMK-LKGFEYDSITYSS---ILEAVGKVDE 631
>gi|225446845|ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Vitis vinifera]
Length = 844
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + + +I +G D +++EMK ++P+ + + +L+D+MG+A R +
Sbjct: 317 LDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKV 376
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM GL P+ Y SL+ ++ +A E L ++ EMK+ G + + LY ++ A
Sbjct: 377 YMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAK 436
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A +F DM+ + P T+S ++ + S G+V A ++N M AG P L
Sbjct: 437 SGKLETAMSVFSDMEKA-GFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLRPGLS 495
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+L+ + D + L + +G + D
Sbjct: 496 TYTALLTLLANKKLVDVAAKVLLEMKAMGFSVD 528
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+++++ G K + TYN+L+ P++ +Y+ M G + +TY ++ + +
Sbjct: 272 FKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAK 331
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ + +++EMKEK ++ S ++ +L+ G D + +++ +M+ +P +
Sbjct: 332 SGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGF-GLRPSAT 390
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ S+I GK+ A +++EM +AGF PN + T +++ + K+ + + + + +
Sbjct: 391 MYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDM 450
Query: 311 PELGITPDDRFCGCLLNV 328
+ G P CLL +
Sbjct: 451 EKAGFLPTPSTYSCLLEM 468
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 146/336 (43%), Gaps = 23/336 (6%)
Query: 99 ARNEKW--RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN----MITYNNLLDT 152
A+ + W ++ ++ L + +FD ++++EM N +I N ++
Sbjct: 199 AKRQPWYSMLNDECYALLFDRLNQSRDFDAIQSLFDEMIRDSGDNNGVSSVIACNQVVRD 258
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ +A++ +K++ D+G + TY SL+ + VY M+ G L
Sbjct: 259 LAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLD 318
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ Y ++ A G D AF++F++MK +N +P F+S++ G++ + ++
Sbjct: 319 GSTYELMIPSLAKSGRLDAAFKLFQEMK-EKNLRPSFLVFASLVDSMGKAGRLDTSMKVY 377
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
EM G P+ + SLI+ + KA + + +R + + + G P+ ++ ++
Sbjct: 378 MEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKS 437
Query: 333 PKEELGKLVECVEKSNSKLGYV-----VKLLLEEQDIEGDFKKEATELFNSISKDVKK-- 385
K E V K G++ LLE G A +L+NS++ +
Sbjct: 438 GKLETAM---SVFSDMEKAGFLPTPSTYSCLLEMHSASGQV-DSAMKLYNSMTNAGLRPG 493
Query: 386 -AYCNCLIDLCVNLNLLENACKLL----ELGLTLEV 416
+ L+ L N L++ A K+L +G +++V
Sbjct: 494 LSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDV 529
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 102 EKW-RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+ W R+DP+ ++T+I G++G D ++ +M VK + + YN+LL ++ +
Sbjct: 4 QGWCRLDPHLYTTIIDTLGSSGCLDLAKKIFSDMDD-SVKKDTVLYNSLLHAYCKSGQVE 62
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTL 219
++ M P+ +TY +++ Y + G LS+++EM +G+Q V Y+ L
Sbjct: 63 TANELFNSMKQKDCRPDLSTYNTIMNMYVKTDVGLTKVLSLFKEMCLQGIQPDVVSYDIL 122
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM---FNEML 276
LA CA + EA IF+ MK +P T++S+IT+ + G S + F EM+
Sbjct: 123 LAACAPKQHVKEAQRIFDTMKKRRGIKPTVVTYTSLITVYANAGIYSSPNQLCPLFGEMV 182
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+PN+ TSLI K ++ + E G+ P+ L+NV T+ +++
Sbjct: 183 AEKCQPNVKTFTSLINSCRKGGHVEEAQTIFEAMKEYGVKPNVVTYNALINVYTERGEQD 242
Query: 337 LGKLV--ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEA 372
+ V + V+ G +L+ G FK+ +
Sbjct: 243 GAQRVFLQMVQSGLQPTGVSFTVLMSSFKATGAFKEAS 280
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 89 KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNF---DGCLNVYEEMKAIGVKPNMIT 145
K ++ +DT + + +++LI +Y AG + + ++ EM A +PN+ T
Sbjct: 133 KEAQRIFDTMKKRRGIKPTVVTYTSLITVYANAGIYSSPNQLCPLFGEMVAEKCQPNVKT 192
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+ +L+++ + + +TI++ M + G+ PN TY +L+ Y + V+ +M
Sbjct: 193 FTSLINSCRKGGHVEEAQTIFEAMKEYGVKPNVVTYNALINVYTERGEQDGAQRVFLQMV 252
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEA 232
+ G+Q + + L++ G EA
Sbjct: 253 QSGLQPTGVSFTVLMSSFKATGAFKEA 279
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 173/407 (42%), Gaps = 43/407 (10%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +S L+ LYG G +D ++ +MK +P+ TYN L+ G +V T+
Sbjct: 357 PNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTL 416
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ D + PN TY L+ A G+ ED + M KG+ S Y+ L+
Sbjct: 417 FHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQ 476
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA F M + T++S+I + G E EA+ + M E G N
Sbjct: 477 AALYDEALVAFNTMNEV-GSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAK 535
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKL 340
+ +I+ Y ++ + ++ ++A + ++ D++ +L V + KE+ ++
Sbjct: 536 SFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEI 595
Query: 341 --------VEC------VEKSNSKLGYVVKLLLE-------------EQDIEGDFKKEAT 373
V C V N + +LL E Q I+GD+ ++
Sbjct: 596 KASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSN 655
Query: 374 -----ELFNSISKD---VKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSP 425
+F+ ++ + + N L++ L A ++L ++ ++ +S
Sbjct: 656 WQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRQSK 715
Query: 426 TQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHG 472
WS+ + + G A TA+ +W+N +++ L GE+ P L + G G
Sbjct: 716 LVWSVDVHRMWEGGAYTAVSLWVNKMNEMLMDGEDLPQLAAVVVGRG 762
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 119/230 (51%), Gaps = 4/230 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNN 148
E S + R ++ R+ PN ++T+I +++G L ++ EM+ GV+P+++TYN
Sbjct: 200 ETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNT 259
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
LL + + ++K M + G+ P TY+ ++ +G+ E + +EM+ +G
Sbjct: 260 LLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEG 319
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ YN L+ A +G EA ++F+ M+++ C P++ T+S ++ + G+ +
Sbjct: 320 YLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAA-GCVPNASTYSILLNLYGKHGRYDDV 378
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F +M E+ EP+ LI+ +G+ +VV + L + I P+
Sbjct: 379 RELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPN 428
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 5/219 (2%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K R+ N FS + K + G++ L +++ M + I KPN Y ++ +GR +
Sbjct: 107 KNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEK 166
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
I+ EM G+ + +Y +L+ AYGR E +L + MK + + ++ YNT++
Sbjct: 167 CSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVIN 226
Query: 222 MCA--DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
CA D+ + + +F +M+ E QPD T++++++ C+ RG EAE +F M+E G
Sbjct: 227 ACARGDLDW-EGLLGLFAEMR-HEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGG 284
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P + + +++ +GK + + V L + G PD
Sbjct: 285 IVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPD 323
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 143/307 (46%), Gaps = 6/307 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+ + ++ +I L G G + C +++EM + GV ++ +Y L++ GR + +
Sbjct: 147 NEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL 206
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +SPN TY +++ A R E L ++ EM+ +G+Q + YNTLL+ CA
Sbjct: 207 ERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAA 266
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA +F+ M P+ T+S ++ GK+ + + EM G+ P++
Sbjct: 267 RGLGDEAEMVFKTMIEG-GIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDIS 325
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
LI+ + K + + ++ G P+ LLN+ + + +++ +L +
Sbjct: 326 SYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQM 385
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI---SKDVKKAYCNCLIDLCVNLNLL 401
++S+++ +L EG + KE LF+ + + D L+ C L
Sbjct: 386 KESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLH 445
Query: 402 ENACKLL 408
E+A K+L
Sbjct: 446 EDAKKIL 452
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+E + D ++++ LI+ + G+ ++V+++M+A G PN TY+ LL+ G+ R
Sbjct: 317 SEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYD 376
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
V+ ++ +M ++ P+ TY L+R +G Y ++ ++++ ++ ++ + ++ Y L+
Sbjct: 377 DVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV 436
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
C G ++A +I M + + P S +S +I EA FN M E G
Sbjct: 437 FACGKGGLHEDAKKILFHM-NGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGS 495
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGK 339
+ + SLI + + + L+R+ E GI+ + + F G + EE K
Sbjct: 496 KSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIK 555
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEG 366
+EK ++ L+EQ +EG
Sbjct: 556 AFVEMEK--------MRCELDEQTLEG 574
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D F+ IK G A + L V EM+A G++P+++++N +D +G+A + +
Sbjct: 224 VDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALEL 283
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ D+G +PN +Y + + A GRA + + REM+ ++ YNT++A A
Sbjct: 284 FTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAK 343
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
A E+ +MK + PD ++++ + +C+ G+ A + E L G +P++
Sbjct: 344 KNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVV 403
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ G+A + + E+G+ PD
Sbjct: 404 SYNTVMHACGRAGEYLQALDLFGMMEEVGVAPD 436
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +F+T + G AG +D L ++ E++ G PN+++YN + GRA +
Sbjct: 258 RPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHE 317
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK-GMQLSVTLYNTLLAMC 223
+ +EM + P+ +Y +++ A+ + + L + EMKE G+ + YNT + +C
Sbjct: 318 LLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVC 377
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A G + A E+ + + QPD ++++++ C G+ +A +F M E G P+
Sbjct: 378 AKAGRWERATELLTE-ALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPD 436
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + +A + ++ L + I P+
Sbjct: 437 RVSFNTAMHACNRALKWQAALQILREMEARSIAPN 471
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 112/247 (45%), Gaps = 3/247 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+DP+ +++T + + AG ++ + E G++P++++YN ++ GRA Q
Sbjct: 363 VDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQAL 422
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M + G++P+ ++ + + A RA + L + REM+ + + +V Y + C
Sbjct: 423 DLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDAC 482
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + A E+ E+M+ + T+++ + C G V + EM G EPN
Sbjct: 483 GRAGEWERALELMEEME-VRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPN 541
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+ T + + + D L ++ + G+ D L+ + EE +L +
Sbjct: 542 VVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGRAGDEEGERLTKI 601
Query: 344 VEKSNSK 350
V +S +
Sbjct: 602 VHESRQR 608
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T A + + D +++T++ G AG + L+++ M+ +GV P+ +++N + RA
Sbjct: 391 TEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRA 450
Query: 157 KRPWQVK-TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ WQ I +EM ++PN +Y + A GRA E L + EM+ +G+ +V
Sbjct: 451 LK-WQAALQILREMEARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHT 509
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
Y + C G D + E+M + +P+ +++ + + GK A A+ +M
Sbjct: 510 YTAAMDACCRGGAVDRVLVLLEEM-DGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQM 568
Query: 276 LEAGFEPNLFVLTSLIQCYGKA 297
++ G + + + G+A
Sbjct: 569 VQRGLRLDSVSYRTALSTAGRA 590
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
++ +++ + + G+A+R + + +EM GL P+ ++ + + A G+A + L
Sbjct: 222 IEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLAL 281
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
++ E+++ G ++ YNT + C G D A E+ +M+ + +PDS ++++++
Sbjct: 282 ELFTEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGL-SVRPDSVSYNTVMAA 340
Query: 259 CSCRGKVSEAEAMFNEMLEA-GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ + + A + EM EA G +P+L + + KA R + L G+ P
Sbjct: 341 FAKKNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQP 400
Query: 318 D 318
D
Sbjct: 401 D 401
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 101 NEKWR-----------IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+E WR + P +S ++K+ G A + L+V+ ++K P YN L
Sbjct: 141 DEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTL 200
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ + ++ +Y E+ G SP+ TY++L+ A+G+ + ++ EMKE G
Sbjct: 201 ILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENG 260
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ + +Y T+LAM + + A + E+MK + C P +T++ +I G+V +A
Sbjct: 261 LHPTEKIYTTILAMYFKLNKVEAALRLVEEMK-GKGCAPTVFTYTELIKGLGKVGRVDDA 319
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++F ML+ G +P++ ++ +LI G+A R +D ++ ++ L P+
Sbjct: 320 YSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPN 369
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI +G +D +++EMK G+ P Y +L + + +
Sbjct: 229 DTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLV 288
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G +P TY L++ G+ +D S++ M + G + V L N L+ +
Sbjct: 289 EEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRA 348
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A ++F M S + C P+ T++++I I + SEA F +M G P+ F
Sbjct: 349 GRLEDALKLFGKMDSLQ-CAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSF 407
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
LI + K R + + L + E G P
Sbjct: 408 TYAILIDGFCKTNRVEKALLLLEEMDEKGFPP 439
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 22/266 (8%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQ 161
+ +P A ++TLI + G+ + +Y E+ + G P+ ITY+ L+ G+ +R
Sbjct: 189 KCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDF 248
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ EM +NGL P Y ++L Y + E L + EMK KG +V Y L+
Sbjct: 249 AFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIK 308
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
VG D+A+ +F +M + C+PD +++I I G++ +A +F +M
Sbjct: 309 GLGKVGRVDDAYSLFFNM-LKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCA 367
Query: 282 PNLFVLTSLIQCYGKAQR-TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
PN+ ++I+ +++ + ++ GI P L++ +T +
Sbjct: 368 PNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNR------ 421
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEG 366
VEK+ LLLEE D +G
Sbjct: 422 ---VEKA--------LLLLEEMDEKG 436
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+E+MKA G+ P+ TY L+D + R + + +EM + G P Y SL+ + GR
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
A+ E +++E+KE + S +Y ++ + G +A ++F +MK C PD +
Sbjct: 454 AKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKL-GCSPDVY 512
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++++++ G + EA ++ M E G P++ ++ K + ++
Sbjct: 513 TYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKM 572
Query: 311 PELGITPD 318
E I PD
Sbjct: 573 KESEIMPD 580
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P++F + LI + + L + EEM G P Y +L+D++GRAKR
Sbjct: 402 IAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAAN 461
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++E+ +N + YA +++ +G D + ++ EMK+ G V YN L++
Sbjct: 462 ELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGM 521
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G DEA + +M+ + C PD + + ++ + G A MF +M E+ P+
Sbjct: 522 IRAGMIDEAHSLMRNMREN-GCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580
Query: 284 LFVLTSLIQCYGKA 297
+++ C +A
Sbjct: 581 AVSYNTILSCLSRA 594
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A ++ +++E+K + + Y ++ G R ++
Sbjct: 441 PAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFC 500
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G SP+ TY +L+ RA ++ S+ R M+E G + +N +L A G
Sbjct: 501 EMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTG 560
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+F MK SE PD+ +++++++ S G A + EM GFE +
Sbjct: 561 GPKRAIEMFTKMKESE-IMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITY 619
Query: 288 TSLIQCYGKA 297
+S+++ GK
Sbjct: 620 SSILEAVGKV 629
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R ++ +IK +G G ++++ EMK +G P++ TYN L+ M RA + +
Sbjct: 473 RSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHS 532
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ + M +NG +P+ ++ +L + + + ++ +MKE + YNT+L+ +
Sbjct: 533 LMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLS 592
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G + A ++ +MK + + DS T+SS I GKV E
Sbjct: 593 RAGMFEMAAKLMREMK-LKGFEYDSITYSS---ILEAVGKVDE 631
>gi|168061839|ref|XP_001782893.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665615|gb|EDQ52293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 713
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 181/419 (43%), Gaps = 67/419 (15%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R ++ D ++TL+ ++G G++ + E+MKA G P TYN+L+ GR +
Sbjct: 305 RKYNYKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNSLILAFGRGSQW 364
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + + M NG+ P +++ LL AY G+ GE + +MKE+ + + +
Sbjct: 365 QEAENTLERMKANGVKPVAQSFSFLLEAYSLSGQIPKGEKLIV---KMKEENLIYGIAGH 421
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQ-----PDSWTFSSMITICSCRGKVSEAEAM 271
N+LL G +I +++ E CQ P+ +F MI + V E
Sbjct: 422 NSLLRFYMRAG------DIGSIIQTYETCQTRGPKPNQSSFVPMIEALTKENTVDERFWG 475
Query: 272 FNEMLE-AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+ LE A F+ + + +L+ G+ ++ D R L L LG +PD C
Sbjct: 476 IAQDLENAPFDVHFAIHGALLSALGRCGQSPDADRLLGILKRLGCSPD--IC-------- 525
Query: 331 QTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK-----DVKK 385
L E E + SKL E +K+ AT LFNS+ + + ++
Sbjct: 526 --------NLFEEGEAAQSKLSG-----------EEAWKRLAT-LFNSLEQEGVNMEAER 565
Query: 386 AYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALH 445
+ N LID + A K+ EL ++L V+ + WSL ++ GAA L
Sbjct: 566 NFHNALIDALWRFDYKLRALKVTELSVSLGVFGSNVCQWKDCWSLDVRFAGTGAAQILLL 625
Query: 446 IWINDLSKALESGEEFPPLLGI--------NTGHGKHKYSDKGLASVFESHLKELNAPF 496
W++ + +A++SGE+ P + I TG + G +HL L APF
Sbjct: 626 TWLSGIRQAIKSGEKMPSKVKILLAWEWQLRTGE------NWGARDGVSAHLNALKAPF 678
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 22/264 (8%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
RI P+ S LI +G A ++ V EM+ G+K +++ YN+L+ G+A ++V
Sbjct: 160 RIVPDLTTCSILINAFGRARDWHKVDLVLAEMETYGIKADLMIYNSLISVYGKAGLFYEV 219
Query: 163 KTIYK----------EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ + K ++ ++ L+ + TY +LL YG+A +D + + EMK+ G+Q
Sbjct: 220 ELVVKSLRAEIARREDLGNSSLAFDLVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPD 279
Query: 213 VTLYNTLLAMCADVGYTD-EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
V +++L+ + D E E+F N + D +++++ + G ++A +
Sbjct: 280 VLTFDSLVNAYGKASHYDGEVLELFRKY----NYKSDLVFYNTLLFMFGKGGHYADAWKI 335
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT- 330
+M AGF P SLI +G+ + + L R+ G+ P + LL +
Sbjct: 336 LEDMKAAGFMPTSETYNSLILAFGRGSQWQEAENTLERMKANGVKPVAQSFSFLLEAYSL 395
Query: 331 --QTPKEELGKLVECVEKSNSKLG 352
Q PK E KL+ +++ N G
Sbjct: 396 SGQIPKGE--KLIVKMKEENLIYG 417
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 120 TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
T G+ +G + + + +G++ + +T+N +++ + R R V + M + P+
Sbjct: 107 TRGDINGMMEAHRILMDMGLQQDSVTFNIIMNALNRVGRIRDVDRYWALMRMGRIVPDLT 166
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
T + L+ A+GRAR V EM+ G++ + +YN+L+++ G E + + +
Sbjct: 167 TCSILINAFGRARDWHKVDLVLAEMETYGIKADLMIYNSLISVYGKAGLFYEVELVVKSL 226
Query: 240 KS---------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
++ + + D T+++++ + G++ + F EM ++G +P++ SL
Sbjct: 227 RAEIARREDLGNSSLAFDLVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSL 286
Query: 291 IQCYGKAQRTDDVVRALNR 309
+ YGKA D V L R
Sbjct: 287 VNAYGKASHYDGEVLELFR 305
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 128 LNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ V++ M+A+ +KP+ + Y +++ + A+R + +++E +G+SP+ + Y L+
Sbjct: 7 IQVFQWMQALPDLKPDELVYRTIINVLINARRMNVAEAVFEEFVKSGMSPSHDDYVILMS 66
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC-----ADVGYTDEAFEIFEDMKS 241
Y + + + + ++M+E G+ V+ YN +L C D+ EA I DM
Sbjct: 67 GYTKCGSLQRGIGILQKMREAGIHPQVSAYNVILEGCTRSTRGDINGMMEAHRILMDM-- 124
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
Q DS TF+ ++ + G++ + + + M P+L + LI +G+A+
Sbjct: 125 --GLQQDSVTFNIIMNALNRVGRIRDVDRYWALMRMGRIVPDLTTCSILINAFGRARDWH 182
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKS 347
V L + GI D L++V K L VE V KS
Sbjct: 183 KVDLVLAEMETYGIKADLMIYNSLISVY---GKAGLFYEVELVVKS 225
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 132/332 (39%), Gaps = 24/332 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ ++ G + M+ + P++ T + L++ GRA+ +V +
Sbjct: 129 DSVTFNIIMNALNRVGRIRDVDRYWALMRMGRIVPDLTTCSILINAFGRARDWHKVDLVL 188
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK----------GMQLSVTLY 216
EM G+ + Y SL+ YG+A + V + ++ + + + Y
Sbjct: 189 AEMETYGIKADLMIYNSLISVYGKAGLFYEVELVVKSLRAEIARREDLGNSSLAFDLVTY 248
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NTLL + G D+ F +MK S QPD TF S++ + GK S + E+
Sbjct: 249 NTLLDVYGKAGRLDDVIYWFGEMKKS-GVQPDVLTFDSLV---NAYGKASHYDGEVLELF 304
Query: 277 EA-GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP-DDRFCGCLLNVMTQTPK 334
++ +L +L+ +GK D + L + G P + + +L +
Sbjct: 305 RKYNYKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNSLILAFGRGSQW 364
Query: 335 EELGKLVECVEKSNSK-LGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
+E +E ++ + K + LLE + G K + VK N +
Sbjct: 365 QEAENTLERMKANGVKPVAQSFSFLLEAYSLSGQIPKGEKLI-------VKMKEENLIYG 417
Query: 394 LCVNLNLLENACKLLELGLTLEVYTDIQSRSP 425
+ + +LL + ++G ++ Y Q+R P
Sbjct: 418 IAGHNSLLRFYMRAGDIGSIIQTYETCQTRGP 449
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 179/439 (40%), Gaps = 55/439 (12%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ L+ LYG G FDG ++ EM+ V P+ TYN L G +V ++ +M
Sbjct: 359 YRVLLDLYGRQGRFDGVRQLFREMR-TAVPPDTATYNVLFRVFGDGGFFKEVVELFHDML 417
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ T +++ A G D V M +GM + Y L+ +
Sbjct: 418 KTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYE 477
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFVLTS 289
EA+ F +M + P T++++ + G EAEA+F+ M AG + + +
Sbjct: 478 EAYVAF-NMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGIQKSKDSFDA 536
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKLVECV 344
LI+ Y + R DD V+A + + PD+R +LN + KE+ +L V
Sbjct: 537 LIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSV 596
Query: 345 EKSNSKLGYVVKL--------------LLEEQD--------------IEGDFKKEAT--- 373
S + Y + L LLEE I+G++ +
Sbjct: 597 TMP-SVIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQM 655
Query: 374 ---ELFNSISK--DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
L NS + D + N L+ + A ++L+ + ++ ++ + W
Sbjct: 656 VEYVLENSTMEGCDYSFRFFNALLGVLWWFGQKGRAARVLDQAVKFGLFPELYRDTKLVW 715
Query: 429 SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGI-------NTGHGKHKYSDKGL 481
SL + +S+G AL A+ +W+N L L E+ P L + G + +GL
Sbjct: 716 SLDVHRMSMGGALVAVSVWLNKLYDRLVEDEDLPQLASVVFFFSISRRGEMEKSTVTRGL 775
Query: 482 --ASVFESHLKE-LNAPFH 497
A V S L + L+A FH
Sbjct: 776 PIAKVVYSFLNDTLSASFH 794
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 3/222 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TL+ D + M GV P+ ++Y +++D A +
Sbjct: 248 RPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRAAE 307
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM G + + + Y L+ A+ R D ++V R+M+ G + Y LL +
Sbjct: 308 LFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYG 367
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D ++F +M+++ PD+ T++ + + G E +F++ML+ G +P++
Sbjct: 368 RQGRFDGVRQLFREMRTA--VPPDTATYNVLFRVFGDGGFFKEVVELFHDMLKTGVQPDM 425
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCL 325
+++ G D L + G+ P D + G +
Sbjct: 426 VTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLV 467
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Query: 124 FDGCLNVYEEMK---AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
FD L ++ EM+ + V+P++ TYN LL Q + + M + G+SP+ +
Sbjct: 229 FDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVS 288
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y ++ A+ A ++ EM G + Y L+ VG T +A + M+
Sbjct: 289 YRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ 348
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
++ C P + T+ ++ + +G+ +F EM A P+ L + +G
Sbjct: 349 -ADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVFGDGGFF 406
Query: 301 DDVVRALNRLPELGITPDDRFC 322
+VV + + + G+ PD C
Sbjct: 407 KEVVELFHDMLKTGVQPDMVTC 428
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 9/227 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW----QVKTI 165
++++LI Y + + ++MKA GV P TYN +L RA P + +
Sbjct: 176 SYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGL 235
Query: 166 YKEMTDNG---LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM + + P+ TY +LL A + + + M E G+ Y ++
Sbjct: 236 FAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDA 295
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
A G A E+F +M ++ + D+ + ++ + G ++A A+ +M G P
Sbjct: 296 FASAGNLSRAAELFSEMAATGHT-ADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 354
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
L+ YG+ R D VR L R + PD L V
Sbjct: 355 TAATYRVLLDLYGRQGRFDG-VRQLFREMRTAVPPDTATYNVLFRVF 400
>gi|116789832|gb|ABK25404.1| unknown [Picea sitchensis]
Length = 278
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MKA G+ P++ TYN ++ G+A+ I+ + +GLS + TY++++ YG+A +
Sbjct: 1 MKAAGIVPSLQTYNTMISVYGKARELQNAVQIFNSLQKSGLSVDEKTYSNMISCYGKAGF 60
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+D ++ M+++G++ YNT+L A G A E+F DM+ E PDS+T+
Sbjct: 61 FQDAAKLFSRMQQEGIKPGKVTYNTMLDAYARSGLHTRAEEVFNDMQ-DEGYSPDSYTYL 119
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
S+I + + EAE + M G P L L+ +GKA +D R + +
Sbjct: 120 SLICAYTNCQRFQEAEDLLKRMHRQGLAPGLVHFNHLVFAFGKAGLVEDATRLYMEIGKA 179
Query: 314 GITPD 318
G+ D
Sbjct: 180 GLKSD 184
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 37/210 (17%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +S +I YG AG F ++ M+ G+KP +TYN +LD R+ + + +
Sbjct: 43 VDEKTYSNMISCYGKAGFFQDAAKLFSRMQQEGIKPGKVTYNTMLDAYARSGLHTRAEEV 102
Query: 166 YKEMTDNGLSPNWNTYASLLRAY-----------------------------------GR 190
+ +M D G SP+ TY SL+ AY G+
Sbjct: 103 FNDMQDEGYSPDSYTYLSLICAYTNCQRFQEAEDLLKRMHRQGLAPGLVHFNHLVFAFGK 162
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
A ED +Y E+ + G++ + + T+L + D G T E +FE +++ +PD
Sbjct: 163 AGLVEDATRLYMEIGKAGLKSDLACHRTMLKIYRDNGRTHEGILLFEKLQNY--IEPDGN 220
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ I + GK+ EA +F M GF
Sbjct: 221 IYRMAIDLYESAGKIVEARYIFQLMKSKGF 250
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D Y EM G+ PN++TY++++ + +A+ + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ PN TY S++ Y + ++ + ++M G++ V YN+L+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F+ M + +P+ T+ +++ + +G + E + + M+ G PN +V
Sbjct: 318 GRCTEARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y K + D + +++ + G+ PD G ++ ++ ++ + E
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 2/193 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
EK +D R + D +STLI Y AG D + M ++G+KP+ +TYN L++
Sbjct: 499 EKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R +++EM +G+SP+ TY +L+ + R +Y + E G QL
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G+ EA+ +
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDL 676
Query: 272 FNEMLEAGFEPNL 284
F + G P++
Sbjct: 677 FAALSANGLVPDV 689
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 25/322 (7%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D F+++I + G +++ M IGVKP++ITY+ L+D A + + +
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M G+ P+ TY +L+ Y + ED L ++REM+ G+ + YN +L
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
T A E++ + S Q + T++ ++ EA MF + +
Sbjct: 597 TRRTAAAKELYVGITES-GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECV 344
+I K R D+ L G+ PD R + N++ Q EEL L +
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 715
Query: 345 EK----SNSK-LGYVVKLLLEEQDI-----------EGDFKKEATE---LFNSISKDVKK 385
E+ +NS+ L +V+ LL+ DI E F EA+ + +S +
Sbjct: 716 EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKYQ 775
Query: 386 AYCNC----LIDLCVNLNLLEN 403
Y +C + LCVN + EN
Sbjct: 776 EYHSCIRGGIFSLCVNSEVQEN 797
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 131 YEEMKAIG---VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
Y M G V PN+ TY L+ + A R + G + + LL+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 188 YGRARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENC 245
+ D + V R M + G +V YN LL D + EA E+ + M +C
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD +++++I G + +A ++EML+ G PN+ +S+I KAQ D +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 306 ALNRLPELGITPDDRFCGCLLN--VMTQTPKEELGKL 340
L + + G+ P+ R +++ + PKE +G L
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
++ R + D + T+I + +G + + +E+M + P I YN+L+ ++
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + K + EM D G+ + + S++ ++ + ++ ++ M G++ + Y
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+TL+ G DEA ++ M S +PD T++++I ++ +A +F EM
Sbjct: 518 STLIDGYCLAGKMDEATKLLASMVSV-GMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRT 300
+G P++ ++Q + +RT
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRT 600
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R+ P +++LI +D + EM G+ + I +N+++D+ + R +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ ++ M G+ P+ TY++L+ Y A ++ + M GM+ YNTL+
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ ++A +F +M+SS PD T++ ++ + + A+ ++ + E+G +
Sbjct: 559 YCKISRMEDALVLFREMESS-GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRL 310
L ++ K TD+ +R L
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNL 645
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +S L+ Y AG ++ + +EM+A GVKP+ ++ +L R + WQ +
Sbjct: 338 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGDWQKAFAV 396
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ + Y ++ +G+ + V+ M+ +G++ V +NTL+
Sbjct: 397 LREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCK 456
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A E+F++M+ S NC P + T++ MI + + + E M +EM E G PN+
Sbjct: 457 GGRHDCAMELFKEMRES-NCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNII 515
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R + + + + G+ P L+N Q
Sbjct: 516 TYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ 561
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R E D ++TLI + G D + +++EM+ P TYN +++ +G +
Sbjct: 434 RMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQE 493
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R V+T+ EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 494 RWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYH 553
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G D A + + M+ ++ + + +S+I +V EA ++ M E
Sbjct: 554 ALVNAYAQRGLADHALNVVKAMR-ADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKE 612
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
F P++ T+L++ + ++ D V + G PD +
Sbjct: 613 NDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRK 655
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++ +I +G ++V+ M+ G++P+++T+N L+D + R ++
Sbjct: 408 DRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELF 467
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM ++ P TY ++ G ++ EMKE+G+ ++ Y TL+ +
Sbjct: 468 KEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRS 527
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA + E MK ++ +P + +++ + RG A + M G E + V
Sbjct: 528 GRYKEAIDCIEAMK-ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVV 586
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L SLI +G+ +R + L + E PD
Sbjct: 587 LNSLINAFGEDRRVVEAFSVLQFMKENDFRPD 618
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR---EMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ P+ +Y+ LL + R D + R ++++ ++ L++ L++ A
Sbjct: 186 IREHNFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFAR 245
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
D A E+ ++ P S +++I+ G+V EAEA+F E AG +P
Sbjct: 246 AALPDAALELLASAQAI-GLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRT 304
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVEC 343
+L++ Y K + L+ + E G+ PD+ L++ T+ + E + L++
Sbjct: 305 RAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKE 364
Query: 344 VEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISKDVK--KAYCNCLIDLCVNLNL 400
+E K YV +L GD++K L + V+ + + N +ID N
Sbjct: 365 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNC 424
Query: 401 LENACKLL 408
L +A +
Sbjct: 425 LGHAMDVF 432
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 79/180 (43%), Gaps = 3/180 (1%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYK---EMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
P++ +Y++LL ++ + P + + ++ D+ L P+ ++ L+ A+ RA +
Sbjct: 193 PDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFARAALPDAA 252
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
L + + G+ L++ G EA +F + + +P + +++++
Sbjct: 253 LELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLK 312
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G + AE + +EM E G P+ + L+ Y +A R + L + G+ P
Sbjct: 313 GYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 372
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 2/230 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++T+I YG+AG FD + E KA G P++I YN +L +G+ +R + I++EM
Sbjct: 92 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 151
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + PN TY L+ R L + +M+ G+ +V N ++
Sbjct: 152 KRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 210
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+EA IFE M + C P++ TFSS+I G+V +A +++ +ML+ G P V TS
Sbjct: 211 EEACSIFEGM-DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTS 269
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
LI+ + K R +D + + G +PD ++ + + + E G+
Sbjct: 270 LIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGR 319
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 3/214 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +A++ +I + +G + + EEMK G P ++TY +++D + + R + +
Sbjct: 367 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 426
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E NG+ N Y+SL+ +G+ ++ + E+ +KG+ +V +N LL
Sbjct: 427 FEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 486
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+EA F+ MK + C P+ T+S +I +C R K ++A + EM + G +PN
Sbjct: 487 AEEINEALICFQSMKDLK-CPPNQITYSILINGLCRVR-KFNKAFVFWQEMQKLGLKPNT 544
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T++I KA + +R G PD
Sbjct: 545 ITYTTMISGLAKAGNILEASGLFSRFKANGGIPD 578
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 11/225 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI + G + L + ++M+ G+ PN++T N ++D + +A++ + +I
Sbjct: 157 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 216
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M D +PN T++SL+ G+ +D S+Y +M + G +Y +L+
Sbjct: 217 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 276
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++ +I+++M + C PD ++ + G+ + A+F E+ GF P+
Sbjct: 277 CGRKEDGHKIYKEMVHT-GCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDAR 335
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
+ LI KA ++ + E G D D FC
Sbjct: 336 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 380
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A++ +++ +S+LI +G G D + EE+ G+ PN+ T+N LLD + +A+
Sbjct: 430 AKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 489
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M D PN TY+ L+ R R ++EM++ G++ + Y T
Sbjct: 490 INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTT 549
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+++ A G EA +F K++ PDS ++++MI S K +A A+F E
Sbjct: 550 MISGLAKAGNILEASGLFSRFKANGGI-PDSASYNAMIEGLSSANKAMDAYALFEE 604
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 111/260 (42%), Gaps = 36/260 (13%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++LI+ + G + +Y+EM G P++ N +D + +A + + +++E+
Sbjct: 266 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 325
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC----- 223
+G P+ +Y+ L+ +A +T ++ MKE+G L YN ++ C
Sbjct: 326 NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKV 385
Query: 224 -----------------------------ADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
A + DEA+ +FE+ KS+ + + +SS
Sbjct: 386 NKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN-GIKLNVVVYSS 444
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I G++ EA + E+++ G PN++ L+ KA+ ++ + + +L
Sbjct: 445 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 504
Query: 315 ITPDDRFCGCLLNVMTQTPK 334
P+ L+N + + K
Sbjct: 505 CPPNQITYSILINGLCRVRK 524
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMG----------RAKRPWQVKTIYKEMTDNGLSPN 177
++ + M+ +P Y L+ +G +A R + +++++ N P
Sbjct: 30 FDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKVPC 89
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFE 237
Y +++ YG A ++ + K KG SV YN +L +EA IFE
Sbjct: 90 AYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFE 149
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
+MK + P+ T++ +I + GK++ A + ++M AG PN+ + +I KA
Sbjct: 150 EMK--RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKA 207
Query: 298 QRTDDVVRALNRLPELGITPD 318
Q+ ++ + + TP+
Sbjct: 208 QKLEEACSIFEGMDDKVCTPN 228
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +S LI F+ ++EM+ +G+KPN ITY ++ + +A + +
Sbjct: 507 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 566
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ NG P+ +Y +++ A D +++ E + KG + LL
Sbjct: 567 FSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK 626
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTF 252
++A + +K + Q S +F
Sbjct: 627 AECLEQAAIVGAVLKETAKSQHASRSF 653
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF IK + AG + V+E MK G + ++N LL + + + ++ +
Sbjct: 265 DAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDK 324
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M SP+ +Y +L+ A+ AR + V+ EM EKGM+ V ++NT++
Sbjct: 325 MHGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQR 383
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
EA ++FE MK+ + P+ WT++ +I RGK+ A F EM EA +P++ T
Sbjct: 384 RPEALKMFELMKA-KGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYT 442
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
L+ YG A+R D V L + + G PD R L+ ++T
Sbjct: 443 CLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLT 484
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L+ + A N V+ EM G+KP+++ +N +++ + R +R + ++
Sbjct: 332 DLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMF 391
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M G PN TY L+R + + + + + EM+E Q V Y LL +
Sbjct: 392 ELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNA 451
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D + E+M + + C PD+ T++++I + + R +A ++ +M++ G EP +
Sbjct: 452 KRMDRVTAVLEEM-TQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHT 510
Query: 287 LTSLIQCYGKAQRTDDVVRAL-NRLPELGITPD 318
+++ Y R + A+ + GI PD
Sbjct: 511 YNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPD 543
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI+ + G D + +EEM+ +P++ TY LL G AKR +V +
Sbjct: 401 PNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAV 460
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA--MC 223
+EMT G P+ TY +L++ + +D +Y++M +KG++ ++ YN ++
Sbjct: 461 LEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFL 520
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D Y ++E+M C PD +++ I G+ EA EM+ G
Sbjct: 521 GDRNYA-MGCAVWEEMHRRGIC-PDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAP 578
Query: 284 LFVLTSLIQCYGKAQRTD 301
+ KA + D
Sbjct: 579 QIDYNKFAADFSKAGKPD 596
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D ++ LIKL D +Y++M G++P + TYN ++ + R + + +
Sbjct: 472 DARTYNALIKLLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAV 531
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G+ P+ N+Y + + R E+ EM KGM YN A +
Sbjct: 532 WEEMHRRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADFSK 591
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTF 252
G D +E+ +K + C + F
Sbjct: 592 AGKPDILYELALKVKFAGKCDASNVFF 618
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYRE---------------------------- 203
G + TY +L G+ R E +++ +E
Sbjct: 224 GGFTHTTITYCKMLHILGKTRQFEMMVAIIQEMGKVGALSMDAFKVAIKSFAAAGEIKNA 283
Query: 204 ------MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS-MI 256
MK+ G V +N LL A+ G EA ++F+ M + PD ++++ M+
Sbjct: 284 VGVFELMKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQYS--PDLRSYTALML 341
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
C+ R V EA ++NEMLE G +P++ V ++I+ + QR + ++ + G
Sbjct: 342 AWCNARNLV-EAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPP 400
Query: 317 PD 318
P+
Sbjct: 401 PN 402
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 42/295 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I +Y AG+++ + M G++ +TYN+L+ K +V IY
Sbjct: 242 DQKMFNMMIYMYKKAGSYEKARKTFALMAERGIQQTTVTYNSLMSFETDYK---EVSNIY 298
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M L P+ +YA L+ AYG+AR E+ L+V+ EM + G++ + YN LL +
Sbjct: 299 DQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSIS 358
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF- 285
G ++A +F+ M+ + PD ++++M++ + AE F +++ FEPN+
Sbjct: 359 GMVEQAQTVFKSMR-RDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDDFEPNVVT 417
Query: 286 ----------------------------------VLTSLIQCYGKAQRTDDVVRALNRLP 311
+LT+++ YGK+ D V +
Sbjct: 418 YGTLIKGYAKINDLEMVMKKYEEMLVRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEME 477
Query: 312 ELGITPDDRFCGCLLNV-MTQTPKEELGKLVECVEKSN--SKLGYVVKLLLEEQD 363
GI PD + LL++ T +EE +LV ++N SK+ +VKL+ E+++
Sbjct: 478 SNGIPPDQKAKNVLLSLPKTDEEREEANELVGHFSENNSLSKVNGIVKLVDEDEE 532
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W F LI YG G+F+G V M G PN+++ L++ G+ R +
Sbjct: 131 WDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYVPNVVSQTALMEAYGKGGRYNNAE 190
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
I++ M G P+ TY +L+ + + R E+ + ++ ++N ++
Sbjct: 191 AIFRRMQKWGPEPSAFTYQIILKTFVQGNKYREAEELFDNLLNDENSPLKPDQKMFNMMI 250
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
M G ++A + F M + Q + T++S+++ + +VS ++++M A
Sbjct: 251 YMYKKAGSYEKARKTFALM-AERGIQQTTVTYNSLMSFETDYKEVSN---IYDQMQRADL 306
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
P++ L+ YGKA+R ++ + + + G+ P + LL+ +
Sbjct: 307 RPDVVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFS 356
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 59/123 (47%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R +++ D +++T++ Y A + +G ++ + +PN++TY L+ +
Sbjct: 372 RRDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDDFEPNVVTYGTLIKGYAKINDL 431
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
V Y+EM G+ N +++ AYG++ + + ++EM+ G+ N L
Sbjct: 432 EMVMKKYEEMLVRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVL 491
Query: 220 LAM 222
L++
Sbjct: 492 LSL 494
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 125/243 (51%), Gaps = 8/243 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN A++T+I + G +++ EM GVKP+++TYN ++D + +A+ + + +
Sbjct: 263 PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++MT NG P+ TY ++ Y ++ ++R+MK +G+ ++ + N+ LA
Sbjct: 323 LRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCK 382
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + EA EIF+ M +++ +PD ++ +++ + G ++ +FN M G +
Sbjct: 383 HGRSKEAAEIFDSM-TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCR 441
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
V LI Y K DD + + + G++PD +++ ++ +G+L + +E
Sbjct: 442 VFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSR-----MGRLTDAME 496
Query: 346 KSN 348
K N
Sbjct: 497 KFN 499
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I Y T G ++ +MK+ G+ PN++ N+ L ++ + R + I+
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
MT G P+ +Y +LL Y + D + ++ MK G+ ++N L+ A
Sbjct: 394 DSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKR 453
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A IF +M+ + PD T+S++I+ S G++++A FN+M+ G +PN V
Sbjct: 454 GMVDDAMLIFTEMQ-QQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAV 512
Query: 287 LTSLIQCY 294
S+IQ +
Sbjct: 513 YHSIIQGF 520
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 4/222 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI Y G D + ++ EM+ GV P+++TY+ ++ R R +
Sbjct: 439 DCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKF 498
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM-QLSVTLYNTLL-AMCA 224
+M G+ PN Y S+++ + + EM KG+ + + +N+++ ++C
Sbjct: 499 NQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCK 558
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D G +A +IF D+ + +PD TF+S+I GK+ +A + + M G E ++
Sbjct: 559 D-GRVMDAHDIF-DLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDI 616
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
++L+ Y K R +D + + G+ P+ G +L
Sbjct: 617 VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ TL+ Y + G F + ++ MK+ G+ + +N L+ + I+
Sbjct: 404 DIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIF 463
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
EM G+SP+ TY++++ A+ R D + + +M +G+Q + +Y++++ C
Sbjct: 464 TEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMH 523
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A E+ +M + +PD F+S+I G+V +A +F+ + + G P++
Sbjct: 524 GGLV-KAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVI 582
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
TSLI Y + D + L+ + +G+ D
Sbjct: 583 TFTSLIDGYCLVGKMDKAFKILDAMEVVGVETD 615
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 8/256 (3%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D F++LI Y G D + + M+ +GV+ +++TY+ LLD + R T
Sbjct: 578 RPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLT 637
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM G+ PN TY +L RA + EM E G ++V++Y +L
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
DEA +F+ + + N + ++MI + EA+ +F + +G PN
Sbjct: 698 RNNCADEAIILFQKL-GTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNE 756
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+I K +D + + + GI P R ++ ++ + K E+ K +
Sbjct: 757 STYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLE--KGEIAKAGNYL 814
Query: 345 EKSNSKLGYVVKLLLE 360
K + K ++LLE
Sbjct: 815 SKVDGK-----RILLE 825
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV-YRE 203
TY+ L+D RA+RP ++ + GL + T ++LL+ A E+ ++V
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCR 262
M E G +V Y+ +L D + A ++F+ M K C P+ ++++I
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
G+ +A ++F+EM G +P++ +I KA+ D L ++ G PD
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338
Query: 323 GCLLNVMTQTPKEELGKLVECVE--KSNSKLGYVVKLLLEEQDIEGDFK----KEATELF 376
C+++ LG+L E + + G + +++ + K KEA E+F
Sbjct: 339 NCMIH-----GYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393
Query: 377 NSISKDVKK----AYCNCL 391
+S++ K +YC L
Sbjct: 394 DSMTAKGHKPDIVSYCTLL 412
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 1/218 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+E + P + L+ G + ++++EM G KPN YN LL+ A
Sbjct: 874 SEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTE 933
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+V +++ M D G++P+ +Y L+ A A D+LS +R++ E G++ + YN L+
Sbjct: 934 KVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLI 993
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +EA +F DM+ S P+ +T++S+I GK +EA M+ E+L+ G+
Sbjct: 994 HGLGRSGRLEEAVSLFNDMEKS-GIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGW 1052
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+PN+F +LI Y + TD+ + ++ G P+
Sbjct: 1053 KPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPN 1090
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ ++ G D +V+++MK G++P +YN+L+ +A R ++ M
Sbjct: 358 AYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHM 417
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+G +PN TY + YG++ + Y MK KG+ V N +L A G
Sbjct: 418 NIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRL 477
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A +F ++KS C PD+ T++ MI CS EA +F+EM+E P++ + S
Sbjct: 478 GMAKRVFHELKSIGVC-PDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNS 536
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDD 319
LI KA R ++ + + L E+ + P D
Sbjct: 537 LIDTLYKAGRGNEAWKIFHELKEMNLDPTD 566
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 3/214 (1%)
Query: 107 DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ F+ ++ G + + L V +EM G + +TYN ++ + ++K ++
Sbjct: 808 DPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMD 867
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y ++ G SP TY LL + ED ++ EM + G + + +YN LL
Sbjct: 868 LYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYR 927
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G T++ E+F++M + PD +++ +I G+++++ + F ++ E G EP+L
Sbjct: 928 LAGNTEKVCELFQNM-VDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDL 986
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI G++ R ++ V N + + GI P+
Sbjct: 987 ITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPN 1020
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S I++ G AG F+ + ++M+ G KP+++T L+ + A R
Sbjct: 243 EDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRV 302
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M + P+ TY +LL G + ++ MK G +V Y +
Sbjct: 303 SDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAV 362
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ VG DEA ++F+ MK + +P ++++S+I+ +++ A +FN M G
Sbjct: 363 VDALCQVGRVDEASDVFDQMK-QKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHG 421
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN + I YGK+ + ++ + GI PD
Sbjct: 422 PTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPD 460
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 102/207 (49%), Gaps = 2/207 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI +G + VY+ M G+ P++ TY+ L+ G+ + V + +EM
Sbjct: 185 YNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREME 243
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D+G+ PN +Y +R G+A E+ + ++M+++G + V L+ + D G
Sbjct: 244 DHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVS 303
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A ++F MK+S+ +PD T+ +++ C G ++N M G+ N+ T++
Sbjct: 304 DAKDVFWKMKASDQ-KPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAV 362
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
+ + R D+ +++ + GI P
Sbjct: 363 VDALCQVGRVDEASDVFDQMKQKGIEP 389
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 1/186 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM+ GVKPN+ +Y + +G+A R + I ++M D G P+ T L++ A
Sbjct: 241 EMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAG 300
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
D V+ +MK + Y TLL C D G + EI+ MK ++ + +
Sbjct: 301 RVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMK-ADGYNDNVVAY 359
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++++ G+V EA +F++M + G EP + SLI + KA R + + N +
Sbjct: 360 TAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNI 419
Query: 313 LGITPD 318
G TP+
Sbjct: 420 HGPTPN 425
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI TAG + L+ + ++ +G++P++ITYN L+ +GR+ R + +++
Sbjct: 950 DIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLF 1009
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +G++PN TY SL+ G+ + +Y E+ + G + +V YN L+ +
Sbjct: 1010 NDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVS 1069
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
G TD AF + M C P+S T+ +
Sbjct: 1070 GSTDNAFASYGQMIVG-GCPPNSSTYMQL 1097
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F T+ + G G MK G+ N TYN L+ + ++ + +YK M
Sbjct: 150 FLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMA 209
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ TY+ L+ A+G+ R E + + REM++ G++ +V Y + + G +
Sbjct: 210 TDGIVPSVRTYSVLMLAFGK-RDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFE 268
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA++I + M+ E C+PD T + +I I G+VS+A+ +F +M + +P+ +L
Sbjct: 269 EAYKILQKME-DEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITL 327
Query: 291 IQCYGKAQRTDDVVRALNRL 310
+ G + V+ N +
Sbjct: 328 LDKCGDNGDSRSVIEIWNAM 347
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 10/256 (3%)
Query: 67 HGKTGSSPKSYIWVNPKSPRASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTA--GN 123
HG T + +++N LK K Y+ + I P+ + LY A G
Sbjct: 420 HGPTPNGYTYVLFINYYGKSGESLKAIKRYELM---KSKGIVPDVVAGNAVLYSLAKSGR 476
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
V+ E+K+IGV P+ ITY ++ +A + ++ EM + P+ S
Sbjct: 477 LGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNS 536
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ +A G + ++ E+KE + + YNTLLA G E + E+M S
Sbjct: 537 LIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNS-- 594
Query: 244 NCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
N P + + + C C+ G+V+ A M M G P+L + + K R +
Sbjct: 595 NSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTE 654
Query: 303 VVRALNRLPELGITPD 318
R ++ ++ + PD
Sbjct: 655 AFRIFCQMKKV-LAPD 669
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 113/256 (44%), Gaps = 13/256 (5%)
Query: 135 KAIGVKPNMI----TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
K++ +P ++ + N +L+ M R + ++ M + N T+ ++ R+ G
Sbjct: 100 KSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGM 159
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
MKE G+ L+ YN L+ GY EA E+++ M +++ P
Sbjct: 160 EGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVM-ATDGIVPSVR 218
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+S ++ R V + EM + G +PN++ T I+ G+A R ++ + L ++
Sbjct: 219 TYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKM 277
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLV----ECVEKSNSKLGYVVKLLLEEQDIEG 366
+ G PD L+ ++ + K V + ++ ++ Y+ LL++ G
Sbjct: 278 EDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYIT--LLDKCGDNG 335
Query: 367 DFKKEATELFNSISKD 382
D + E++N++ D
Sbjct: 336 D-SRSVIEIWNAMKAD 350
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 108/305 (35%), Gaps = 80/305 (26%)
Query: 82 PKSPRASKLKEKSYDTRARNEKWRI---------DPN--AFSTLIKLYGTAGNFDGCLNV 130
P + L + Y NE W+I DP ++TL+ G G +++
Sbjct: 529 PDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHL 588
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG----------------- 173
EEM + PN+ITYN +LD + + + MT G
Sbjct: 589 LEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVK 648
Query: 174 -----------------LSPNWNTYASLLRAYGRARYGEDTLSVYRE------------- 203
L+P++ T ++L ++ + + L +E
Sbjct: 649 EDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSS 708
Query: 204 --------MKEKGMQLSV------TLYNTLL------AMCADVGYTDEAFEIFEDMKSSE 243
+K GM+ S+ L LL + + + +A E E +K E
Sbjct: 709 FHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFE 768
Query: 244 NCQPDSWTFSSMITICSCRGK--VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ T S IC + + AE +F+EM G +P+ F ++ GK+ R +
Sbjct: 769 SLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIE 828
Query: 302 DVVRA 306
D+++
Sbjct: 829 DMLKV 833
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 193/424 (45%), Gaps = 17/424 (4%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D + +++++K+Y +F + VY+ +K G++P+ TYN L+ R RP +
Sbjct: 949 FKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGF 1008
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM GL P +TY SL+ ++G+ + E ++ E++ KG +L + Y+T++ +
Sbjct: 1009 SLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIY 1068
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +A +F MK + +P T ++ G+ EAE + + + E G +
Sbjct: 1069 RNSGSHSKAERLFSMMKDA-GVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLS 1127
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
+S+I Y + + ++ L ++ + G+ PD R C + + + + E L+
Sbjct: 1128 TLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLN 1187
Query: 343 CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLE 402
++ + L ++LL E+ + E+ ++ + + N L DL L
Sbjct: 1188 ALQDAGFDLP--IRLLTEKPESLVSALDRCLEMLETLEDNAAFNFVNALEDLLWAFELRA 1245
Query: 403 NACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWI----ND----LSKA 454
A + +L + +Y R + + S+S + L++ I ND L +
Sbjct: 1246 TASWVFQLAIKKRIYRHDVFRHADKSNKWQSSMS---PIQMLNVTIQKENNDKKDLLDAS 1302
Query: 455 LESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAK 514
L+ E P + + TG +Y+ L S ++ L E+ +PF + G + + +
Sbjct: 1303 LQGCPESPKSVVLITGTA--EYNMVSLDSTLKACLWEMGSPFLPCKSRSGLLIAKAHSLR 1360
Query: 515 SWLE 518
WL+
Sbjct: 1361 MWLK 1364
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 1/230 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R R D ++TLI A N + V+++M+A +P++ TYN ++ GR
Sbjct: 317 VRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGL 376
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++ ++ G P+ +Y SLL A+ R E ++ EM + G YNT
Sbjct: 377 SGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNT 436
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ M G + A +++ DM+SS PD+ T++ +I K++EA + +EML
Sbjct: 437 MIHMYGKQGQNELALQLYRDMQSSGR-NPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNT 495
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
G +P L ++LI Y KA + + + + GI PD +L++
Sbjct: 496 GVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDI 545
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 15/269 (5%)
Query: 86 RASKLKE--KSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
RAS L+E K +D E P+ ++ +I +YG G ++ ++++ G P
Sbjct: 338 RASNLEEAAKVFDDM---EAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFP 394
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+ ++YN+LL R +VK I++EM G + TY +++ YG+ E L +Y
Sbjct: 395 DAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLY 454
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
R+M+ G Y L+ EA + +M ++ +P T+S++I +
Sbjct: 455 RDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNT-GVKPTLKTYSALICGYAK 513
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL---GITPD 318
GK EAE F+ ML +G P+ + ++ + R ++ RA+ E+ GIT D
Sbjct: 514 AGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIH---LRFNEPKRAMTLYKEMLHDGITLD 570
Query: 319 DRFCGCLLNVMTQTPK-EELGKLVECVEK 346
+L + + K E++G+++ +E+
Sbjct: 571 HSLYELMLRTLRKVNKVEDIGRVIRDMEE 599
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 133/276 (48%), Gaps = 19/276 (6%)
Query: 77 YIWVNPK---SPRA-------SKLKEKSYDTRARNEKWRIDPNA------FSTLIKLYGT 120
Y W+N + SP A S L + + + A R +P+A ++ ++ +Y
Sbjct: 207 YEWLNLRHWYSPNARMLSTILSVLGKANQEALAVEVFMRAEPSAGNTVQVYNAMMGVYAR 266
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR--AKRPWQVKTIYKEMTDNGLSPNW 178
G F+ + + M+ G KP+++++N L++ + A P + E+ +GL P+
Sbjct: 267 RGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDT 326
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
TY +L+ A RA E+ V+ +M+ Q + YN ++++ G + +A ++F D
Sbjct: 327 ITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFND 386
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
++ S PD+ +++S++ + G V + + ++ EM++ GF + ++I YGK
Sbjct: 387 LE-SRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQG 445
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ + ++ + G PD L++ + +T K
Sbjct: 446 QNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNK 481
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + L++ G D V +E++ +G K + + +LD RA ++VK IY
Sbjct: 849 DTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHG 908
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G P + Y + R R + D ++ EM+E G + ++++N++L M +
Sbjct: 909 MKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIED 968
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ ++++ +K + +PD T++++I + + E ++ +EM AG EP L
Sbjct: 969 FRKTIQVYQRIK-EDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYK 1027
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
SL+ +GK Q + L G D F ++ +
Sbjct: 1028 SLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKI 1067
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 40/210 (19%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I +YG G + L +Y +M++ G P+ +TY L+D++G+ + + +
Sbjct: 430 DEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVM 489
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRA---------------------------------RY 193
EM + G+ P TY++L+ Y +A R+
Sbjct: 490 SEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRF 549
Query: 194 GE--DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
E +++Y+EM G+ L +LY +L V ++ + DM+ E C ++ T
Sbjct: 550 NEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDME--EICGMNTQT 607
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
SS++ C EA M + FE
Sbjct: 608 ISSILVKGEC---YDEAAKMLRRAISDHFE 634
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ +I+ YG + +V ++ + + +N L++ + + + I+ M
Sbjct: 781 YVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMM 840
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G SP +T LL+A ++ V +E+++ G ++S + +L A G
Sbjct: 841 RDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIF 900
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E +I+ MK++ P + M + S +V + EAM +EM EAGF+P+L + S+
Sbjct: 901 EVKKIYHGMKAA-GYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSV 959
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
++ Y + ++ R+ E G+ PD+ L+ + + + E G
Sbjct: 960 LKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEG 1007
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 152/323 (47%), Gaps = 15/323 (4%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEM------KAIGVKPNMITYNNLLD 151
R +K PNA + TL+K GN L +++EM I KP +I+Y+ ++D
Sbjct: 191 RMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + +R + + +++EM G++P +Y SL+ + E+ ++ EM +G+Q
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQP 310
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+V +N L+ + G EA ++ E M P+ T++S+I G ++ A +
Sbjct: 311 NVVTFNVLIDVLCKEGKVIEAKDLLEVM-IQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
F M G EP++ T LI Y K + ++ ++ N + ++G PD + G LL + Q
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 429
Query: 332 TPKEELGKLVECVEKSNSKLG--YVVKLLLEEQDIEGDFKKEATELFNSI-SKDVK-KAY 387
K K + V K G Y+ + L G EA ELFN + S ++K
Sbjct: 430 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCL-FEAMELFNKLKSYNIKLDIE 488
Query: 388 C-NCLIDLCVNLNLLENACKLLE 409
C NCLID LE A +L E
Sbjct: 489 CFNCLIDGLCKAGKLETAWELFE 511
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G P+++TY L+ + R + ++ M G +PN TY +L++ R
Sbjct: 161 GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIA 220
Query: 198 LSVYREMKEK----GMQLS--VTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
L +++EM G+ V Y+ ++ A+C D DEA ++FE+MK + P
Sbjct: 221 LKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKD-RREDEARDLFEEMK-VQGMTPTVI 278
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+++S+I C GK EA+ +FNEM+ G +PN+ LI K + + L +
Sbjct: 279 SYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 338
Query: 311 PELGITPD 318
+ GI P+
Sbjct: 339 IQRGIVPN 346
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI Y + + +Y M +G +P++ TY LL + + + K ++
Sbjct: 381 DVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF 440
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ + Y L + + + ++ ++K ++L + +N L+
Sbjct: 441 GVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKA 500
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A+E+FE + E QPD T++ MI G+V +A +F +M + G P+
Sbjct: 501 GKLETAWELFEKLPQEE-LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKIT 559
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI+ + ++++ + VV L+ + + ++ D
Sbjct: 560 YATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K KSY+ + +D F+ LI AG + ++E++ ++P+++TYN ++
Sbjct: 477 KLKSYNIK-------LDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
R + + ++++M NG +P+ TYA+L+R + ++ E + + M ++ +
Sbjct: 530 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589
Query: 211 LSVTL 215
L V +
Sbjct: 590 LDVNI 594
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNE 274
+ LL+ A + + + F ++ M+ S PD T + ++ C C +V E A+
Sbjct: 99 FTHLLSGLAKIKHYSQVFYLYNQMRLS-GISPDCCTLNILLN-CLCNVNRVGEGLAVMAG 156
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+L G+ P++ T+LI+ R R+ +LG TP+ G L+ + +T
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRT 214
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++T++++YG A F ++++ M+ ++ N++TYN ++ G+
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+A + +++++++ G+++ LY T++
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
VG A + ++K PD+ + ITI + G+ EA +F + E+G
Sbjct: 478 VAYERVGLMGHAKRLLHELK-----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGE 532
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I Y + QR +V+ ++ G PD +LN
Sbjct: 533 VKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLN 579
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+ P+++ YN++++ G+AK + + +
Sbjct: 224 DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLI 283
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + G+ PN +Y++LL Y + LSV+ EMKE L +T N ++ + +
Sbjct: 284 KEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 343
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F ++ + +P+ ++++++ + EA +F M E N+
Sbjct: 344 DMVKEADRLFWSLRKM-DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVT 402
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I+ YGK + + + GI P+
Sbjct: 403 YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 434
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ R + +I+
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF 248
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G++P+ Y S++ YG+A+ + + +EM E G+ + Y+TLL++ +
Sbjct: 249 SRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVEN 308
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +MK NC D T + MI + V EA+ +F + + EPN+
Sbjct: 309 HKFLEALSVFAEMKEV-NCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 367
Query: 287 LTSLIQCYGKAQ 298
++++ YG+A+
Sbjct: 368 YNTILRVYGEAE 379
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+EE K P++ YN +L + RAK+ ++ EM L+P+ TY++L+ ++G
Sbjct: 145 VHEEAK---YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 201
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ + LS ++M++ + + LY+ L+ + + +A IF +K S PD
Sbjct: 202 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRS-GITPDL 260
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++SMI + EA + EM EAG PN ++L+ Y + + + +
Sbjct: 261 VAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAE 320
Query: 310 LPELGITPDDRFCGCLLNVMTQ 331
+ E+ D C +++V Q
Sbjct: 321 MKEVNCALDLTTCNIMIDVYGQ 342
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 48/209 (22%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + AG + V+ + G ++ + +++ R +R V ++++M
Sbjct: 506 TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 565
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G P+ N A +L AYG+ R E +VYREM+E+G C
Sbjct: 566 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG--------------C--------- 602
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL------FV 286
+F PD F M+++ S + E++F + LE+ +PN+ V
Sbjct: 603 --VF----------PDEVHF-QMLSLYSSKKDFEMVESLF-QRLES--DPNVNSKELHLV 646
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ +L Y +A + +D R +NR+ E GI
Sbjct: 647 VAAL---YERADKLNDASRVMNRMRERGI 672
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F +I LY + + V+E+M+ G P+ +L+ G+ + + T+Y
Sbjct: 535 DISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVY 594
Query: 167 KEMTDNG 173
+EM + G
Sbjct: 595 REMQEEG 601
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 11/223 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ + +G D V+ EM+ GV PN+ TY ++D M RA + + + + +M
Sbjct: 253 YTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMI 312
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT- 229
D+G PN T+ +++RA+ +A E L V+ +M++ G + + YN L+ G +
Sbjct: 313 DSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSN 372
Query: 230 -DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A ++ M ++ C PD TF+ M+ + G V+ A ++ M E +PN+
Sbjct: 373 LDAAMKMLTRM-IAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYN 431
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
L++ + + D V+R + G+ P+ + FCG
Sbjct: 432 LLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCG 474
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ ++KL GN + +YE M+ + KPN++TYN L+ K V I
Sbjct: 391 DCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIK 450
Query: 167 KEMTDNGLSPNWNTYASLLRAY-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M G+ PN NTYA+L+ A+ GR + +++ ++EK ++ + +Y+ +LA+
Sbjct: 451 RDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRK 510
Query: 226 VGYTDEAFEIFEDM 239
G E+ E M
Sbjct: 511 AGQLRRHEELVEMM 524
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 84/207 (40%), Gaps = 37/207 (17%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM-GRAK------------ 157
F+ +++ + AG + L V+ +M+ +G +P++ITYN L++T G+ +
Sbjct: 323 FNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTR 382
Query: 158 -------------RPW-----------QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
P + +Y+ M + PN TY L+R + +
Sbjct: 383 MIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKS 442
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ L + R+M +G++ +V Y L+ G A +M + +P +
Sbjct: 443 MDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYD 502
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGF 280
++ + G++ E + M++ GF
Sbjct: 503 MVLALLRKAGQLRRHEELVEMMVDRGF 529
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y ++D + + + + EM + + + +L+R Y RA + ++R M+
Sbjct: 148 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 207
Query: 206 EKGMQLS--VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
E G TL +LL + EA +F+ KS PD +++++ G
Sbjct: 208 EYGAGAPDPATL-ASLLGALSKKRLASEAQAMFDSYKSV--FTPDVVLYTTLVHAWCRSG 264
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ EAE +F EM +AG PN++ T++I +A + L ++ + G P+
Sbjct: 265 RLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPN 319
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 126/248 (50%), Gaps = 11/248 (4%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L E+++ R R+ P+ F+ I + G G +V ++++A G+ P+++TYN
Sbjct: 168 LAERAFKAALRR---RVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYN 224
Query: 148 NLLD---TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
++D GRA R + V + KEM + G+SPN T+ L+ Y + + V+ EM
Sbjct: 225 TIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEM 284
Query: 205 KEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
K++G+ SV Y+ L+ +C++ G +E ++ ++MK P+ T +S++ +G
Sbjct: 285 KQQGIAASVVTYSALVWGLCSE-GKVEEGVKLVDEMKDL-GLVPNLATLNSVLNGFCKKG 342
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
+++AE + M + +PN+ T L+ Y + + D + + G+ P+ R
Sbjct: 343 MMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYN 402
Query: 324 CLLNVMTQ 331
CL+ T+
Sbjct: 403 CLIAGFTR 410
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 1/187 (0%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
+ M+ VKPN++TY L+D R + + + M+ G+ PN Y L+ + R
Sbjct: 352 DSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRN 411
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ EM+ KG++ + YN L+ G +A ++ ++M +P T
Sbjct: 412 GDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMV-GLEPVHLT 470
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I +G + A + M + N+ I+C + + ++ LN +
Sbjct: 471 YNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEML 530
Query: 312 ELGITPD 318
E G+ P+
Sbjct: 531 EKGLVPN 537
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 5/185 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E+ + PN ++ L+ Y L V E M GV+PN YN L+ R
Sbjct: 355 EQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDW 414
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
V + EM G+ + TY L+ A + + EM G++ YNT+
Sbjct: 415 RSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTI 474
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEA 278
+ + G A+EI M+ + + + T++ I C CR GK+ E + NEMLE
Sbjct: 475 INGYCEKGNIKSAYEIRTRMEKGKK-RANVVTYNVFIK-CLCRMGKMEETNELLNEMLEK 532
Query: 279 GFEPN 283
G PN
Sbjct: 533 GLVPN 537
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRA 156
R + R D ++ LI G + + +EM +G++P +TYN +++ G
Sbjct: 425 RMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNI 484
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
K ++++T M N TY ++ R E+T + EM EKG+ + Y
Sbjct: 485 KSAYEIRT---RMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTY 541
Query: 217 NTLLAMCADVGYTDE 231
+T+ + GYT +
Sbjct: 542 DTIKEGMMEKGYTPD 556
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 3/204 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PNAF+ LI +G G+ N+YEEM +G P++IT+ +L+D R + +
Sbjct: 339 IKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSL 398
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ E+ LSPN T+A L A + + R++K + + +YN ++
Sbjct: 399 KLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGF 458
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G DEA I +M+ + C+PD T++ +I +G++SEA ++FN ML G P+
Sbjct: 459 CKAGNVDEANVILAEME-EKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPD 517
Query: 284 LFVLTSLIQCYGKAQRTDDVVRAL 307
+TSLI C KA ++ R +
Sbjct: 518 SITMTSLISCLLKAGMPNEAYRIM 541
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 10/186 (5%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT--YASLLRAYGRARYGE 195
GV+ +++ YN LL+ + R + + ++E GL +++ + L+R R +
Sbjct: 197 GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQM--GLHGPFDSCSFNILIRGLCRIGKVD 254
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
++ EM+ G V YNTL+ V D ++ +++ S + PD T++S+
Sbjct: 255 KAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSI 314
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE--- 312
I+ GK+ +A +FN M+ +G +PN F LI +GK D+V A N E
Sbjct: 315 ISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGK---VGDMVSAENMYEEMLL 371
Query: 313 LGITPD 318
LG PD
Sbjct: 372 LGCPPD 377
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 4/195 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +F+ LI+ G D ++ EM+ G P++ITYN L++ R + +
Sbjct: 236 DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLL 295
Query: 167 KE-MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KE ++ N LSP+ TY S++ Y + E ++ M G++ + +N L+
Sbjct: 296 KELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGK 355
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNL 284
VG A ++E+M C PD TF+S+I CR GKV + +++E+ PN
Sbjct: 356 VGDMVSAENMYEEMLLL-GCPPDIITFTSLID-GHCRTGKVERSLKLWHELNARNLSPNE 413
Query: 285 FVLTSLIQCYGKAQR 299
+ L K R
Sbjct: 414 YTFAILTNALCKENR 428
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/213 (17%), Positives = 91/213 (42%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTI 165
D ++TLI + D ++ +E+ + + P+++TY +++ + + + +
Sbjct: 271 DVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASIL 330
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +G+ PN T+ L+ +G+ ++Y EM G + + +L+
Sbjct: 331 FNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCR 390
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + + +++ ++ ++ N P+ +TF+ + ++ EA ++ F
Sbjct: 391 TGKVERSLKLWHEL-NARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPF 449
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +I + KA D+ L + E PD
Sbjct: 450 MYNPVIDGFCKAGNVDEANVILAEMEEKRCKPD 482
>gi|255086920|ref|XP_002505383.1| predicted protein [Micromonas sp. RCC299]
gi|226520653|gb|ACO66641.1| predicted protein [Micromonas sp. RCC299]
Length = 175
Score = 104 bits (260), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLIK G +G +D L +Y+ MK+ GV N IT + L++ G++K+ + +++EM
Sbjct: 1 FTTLIKTCGRSGGWDKALELYQAMKSRGVAANTITCSALINACGKSKQWEKALDVFREMK 60
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ N TY++L+ A + R + L V+RE + G++ Y T++A C D
Sbjct: 61 ADGVEANIFTYSALISACAKGRQLDKALEVFRECQVSGVEPDAITYGTVIAACEKGKRCD 120
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
EA +IF M+ ++N + T++S+++ C G+ +A +F +M + G +P+
Sbjct: 121 EALDIFRQMR-AKNVDANVITYNSVLSACDRAGRADDALDIFAQMRKEGVKPD 172
Score = 88.6 bits (218), Expect = 7e-15, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+ L+ T GR+ + +Y+ M G++ N T ++L+ A G+++ E L V+REMK
Sbjct: 1 FTTLIKTCGRSGGWDKALELYQAMKSRGVAANTITCSALINACGKSKQWEKALDVFREMK 60
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
G++ ++ Y+ L++ CA D+A E+F + + S +PD+ T+ ++I C +
Sbjct: 61 ADGVEANIFTYSALISACAKGRQLDKALEVFRECQVS-GVEPDAITYGTVIAACEKGKRC 119
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EA +F +M + N+ S++ +A R DD + ++ + G+ PD
Sbjct: 120 DEALDIFRQMRAKNVDANVITYNSVLSACDRAGRADDALDIFAQMRKEGVKPD 172
Score = 42.4 bits (98), Expect = 0.70, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+A + T+I D L+++ +M+A V N+ITYN++L RA R
Sbjct: 99 VEPDAITYGTVIAACEKGKRCDEALDIFRQMRAKNVDANVITYNSVLSACDRAGRADDAL 158
Query: 164 TIYKEMTDNGLSPN 177
I+ +M G+ P+
Sbjct: 159 DIFAQMRKEGVKPD 172
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 122/240 (50%), Gaps = 5/240 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +++LIK + G + +++EM G P++ N +D + +A + + +
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E+ G P+ +Y+ L+ +A + +T ++ MKE+G L YNT +
Sbjct: 570 FEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCK 629
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A+++ E+MK+ QP T+ S+I + ++ EA +F E G E N+
Sbjct: 630 SGKVNKAYQLLEEMKTKGR-QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVV 688
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +SLI +GK R D+ + L + G+TP+ CLL+ + + EE+ + + C +
Sbjct: 689 IYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA--EEINEALVCFQ 746
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 3/214 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +A++T I + +G + + EEMK G +P ++TY +++D + + R + +
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYML 674
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E NGL N Y+SL+ +G+ ++ + E+ +KG+ +V +N LL
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 734
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+EA F++MK+ + P+ T+S +I +C R K ++A + EM + G +PN
Sbjct: 735 AEEINEALVCFQNMKNLKG-TPNHITYSILINGLCRVR-KFNKAFVFWQEMQKQGLKPNT 792
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T++I KA + R G PD
Sbjct: 793 ITYTTMIAGLAKAGNIAEASSLFERFKANGGVPD 826
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 10/227 (4%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ + + F+T+I+++ G D L++ +EMK+ + +++ YN +D G+A +
Sbjct: 229 YEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAW 288
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ E+ +GL P+ TY S++ + ++ + ++ +M++ YNT++
Sbjct: 289 KFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGY 348
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G DEA+ + E K + C P ++ ++T +G++ EA F EM + PN
Sbjct: 349 GSAGKFDEAYSLLERQK-ARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APN 406
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
L LI KA + + + + E G+ P+ DR C
Sbjct: 407 LSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLC 453
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 10/294 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ I +G AG D + E+K+ G+ P+ +TY +++ + + R + I+
Sbjct: 267 DIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIF 326
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M N P Y +++ YG A ++ S+ K +G SV YN +L
Sbjct: 327 EQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKK 386
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA FE+MK ++ P+ T++ +I + G+V A + + M EAG PN+
Sbjct: 387 GRLGEALRTFEEMK--KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMT 444
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFCGCLLNVMTQTPKEELGKLVECVE 345
+ +I KA++ D+ + +PD+ FC + + Q ++ +L E +
Sbjct: 445 VNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQML 504
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI-----SKDVK--KAYCNCLI 392
S+ VV L + + K++ ++F + S D++ AY +C+
Sbjct: 505 DSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVF 558
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 24/289 (8%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ +P Y L+ + + + T++ +M + G + + + +++R + R
Sbjct: 189 MRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGR 248
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ LS+ EMK + + LYN + G D A++ F ++KS PD T++
Sbjct: 249 LDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKS-HGLLPDDVTYT 307
Query: 254 SMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
SMI + C+G ++ EA +F +M + P + ++I YG A + D+ L R
Sbjct: 308 SMIGVL-CKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKA 366
Query: 313 LGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN-------SKLGYVVKLLLEEQDIE 365
G P C+L + + K LG+ + E+ S ++ +L + ++E
Sbjct: 367 RGCIPSVIAYNCILTCLGK--KGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVE 424
Query: 366 GDFK-----KEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
FK KEA N ++ N +ID L+ AC + E
Sbjct: 425 AAFKVRDAMKEAGLFPNVMT-------VNIMIDRLCKAKKLDEACSIFE 466
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 133/323 (41%), Gaps = 52/323 (16%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ ++ G G L +EEMK PN+ TYN L+D + +A + M
Sbjct: 375 AYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAM 433
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ GL PN V N ++
Sbjct: 434 KEAGLFPN-----------------------------------VMTVNIMIDRLCKAKKL 458
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
DEA IFE M + + C PD TF S+I +G+V +A ++ +ML++ PN V TS
Sbjct: 459 DEACSIFEGM-NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTS 517
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
LI+ + K R +D + + G +PD R ++ + + E GK E+ S
Sbjct: 518 LIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAG--ETGKGRALFEEIKS 575
Query: 350 KLGYVVKLL----LEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENAC 405
+ G++ ++ L ++ F +E ELF ++ + C++D ++ C
Sbjct: 576 R-GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQ------GCVLDTHAYNTFIDGFC 628
Query: 406 KLLELGLTLEVYTDIQS--RSPT 426
K ++ ++ ++++ R PT
Sbjct: 629 KSGKVNKAYQLLEEMKTKGRQPT 651
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 11/225 (4%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI + AG + V + MK G+ PN++T N ++D + +AK+ + +I
Sbjct: 405 PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSI 464
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M SP+ T+ SL+ G+ +D +Y +M + + +Y +L+
Sbjct: 465 FEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFK 524
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++ +IF++M C PD ++ + G+ + A+F E+ GF P++
Sbjct: 525 CGRKEDGHKIFKEM-IHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVM 583
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
+ LI KA + + E G D D FC
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFC 628
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 109/244 (44%), Gaps = 4/244 (1%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDP--NAFSTLIKLYGTAGNFDGCL 128
G S K+ I + +++KL+E +D K++ P +A++TLI + D L
Sbjct: 160 GPSTKTCIELILSCIKSNKLRE-GFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIML 218
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++ +M+ +G + ++ + ++ R R ++ EM N L + Y + +
Sbjct: 219 TLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCF 278
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+A + + E+K G+ Y +++ + DEA EIFE M+ + N P
Sbjct: 279 GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNV-PC 337
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
++ +++MI GK EA ++ G P++ ++ C GK R + +R
Sbjct: 338 AYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFE 397
Query: 309 RLPE 312
+ +
Sbjct: 398 EMKK 401
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L+ A + L ++ MK + PN ITY+ L++ + R ++ +
Sbjct: 718 LTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAF 777
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++EM GL PN TY +++ +A + S++ K G YN ++
Sbjct: 778 VFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGL 837
Query: 224 ADVGYTDEAFEIFEDMK 240
+ EA++IFE+ +
Sbjct: 838 SYSRRAMEAYKIFEETR 854
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +S LI F+ ++EM+ G+KPN ITY ++ + +A + ++
Sbjct: 755 PNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSL 814
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
++ NG P+ +Y +++ +R + ++ E + KG +
Sbjct: 815 FERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNI 860
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF IK + AG + V+E M+ G + ++N LL + + + ++ +
Sbjct: 261 DAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDK 320
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M SP+ +Y +L+ A+ AR + V+ EM EKGM+ V ++NT++
Sbjct: 321 MLGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQR 379
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
EA ++FE MK+ + P+ WT++ +I RGK+ A F EM EA +P++ T
Sbjct: 380 QHEAVKMFELMKA-KGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYT 438
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
L+ YG A+R D V L + + G PD R L+ ++T
Sbjct: 439 CLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLT 480
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 103/217 (47%), Gaps = 2/217 (0%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
++ D +++ L+ + A N V+ EM G+KP+++ +N +++ + R +R +
Sbjct: 324 QYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEA 383
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+++ M G PN TY L+ + + + + + EM+E Q V Y LL
Sbjct: 384 VKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVG 443
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ D + E+M + + C PD+ T++++I + + R +A ++ +M++ G +P
Sbjct: 444 YGNAKRMDRVTAVLEEM-TQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDP 502
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRAL-NRLPELGITPD 318
+ +++ Y R + A+ + GI PD
Sbjct: 503 TIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPD 539
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI + G D + +EEM+ +P++ TY LL G AKR +V +
Sbjct: 397 PNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAV 456
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA--MC 223
+EMT G P+ TY +L++ + +D +Y++M +KG+ ++ YN ++
Sbjct: 457 LEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFL 516
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
D Y ++E+M C PD +++ I+ G+ EA EM+ G +
Sbjct: 517 GDRNYA-MGCAVWEEMHRRGIC-PDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMK 572
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ YG A D V EEM G P+ TYN L+ + K P IY
Sbjct: 433 DVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIY 492
Query: 167 KEMTDNGLSPNWNTYASLLRAY--GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
K+M GL P +TY ++++Y G Y +V+ EM +G+ V Y ++
Sbjct: 493 KKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGC-AVWEEMHRRGICPDVNSYTVFISGHI 551
Query: 225 DVGYTDEAFEIFEDM 239
G +EA++ E+M
Sbjct: 552 RHGRPEEAYKYIEEM 566
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D ++ LIKL D +Y++M G+ P + TYN ++ + R + + +
Sbjct: 468 DARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCAV 527
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G+ P+ N+Y + + R E+ EM KGM+ N A +
Sbjct: 528 WEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAADLSK 587
Query: 226 VGYTDEAFEIFEDMK 240
G D +E+ + +K
Sbjct: 588 AGKLDMLYELAQKVK 602
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYRE---------------------------- 203
G + TY +L G+ R E +++ +E
Sbjct: 220 GGFTHTTITYCKMLLILGKTRQFESMVALLQEMGKAGTLSMDAFKVAIKSFAAAGEIKNA 279
Query: 204 ------MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS-MI 256
M++ G V +N LL A+ G EA ++F+ M + PD ++++ M+
Sbjct: 280 VGVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQYS--PDLRSYTALML 337
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
C+ R V EA ++NEMLE G +P++ V ++I+ + QR + V+ + G
Sbjct: 338 AWCNARNLV-EAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPP 396
Query: 317 PD 318
P+
Sbjct: 397 PN 398
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D Y EM G+ PN++TY++++ + +A+ + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ PN TY S++ Y + ++ + ++M G++ V YN+L+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F+ M + +P+ T+ +++ + +G + E + + M+ G PN +V
Sbjct: 318 GRCTEARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y K + D + +++ + G+ PD G ++ ++ ++ + E
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 2/193 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
EK +D R + D +STLI Y AG D + M ++G+KP+ +TYN L++
Sbjct: 499 EKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R +++EM +G+SP+ TY +L+ + R +Y + E G QL
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G+ EA+ +
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDL 676
Query: 272 FNEMLEAGFEPNL 284
F + G P++
Sbjct: 677 FAALSANGLVPDV 689
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 25/322 (7%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D F+++I + G +++ M IGVKP++ITY+ L+D A + + +
Sbjct: 477 LDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M G+ P+ TY +L+ Y + ED L ++REM+ G+ + YN +L
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
T A E++ + S Q + T++ ++ EA MF + +
Sbjct: 597 TRRTAAAKELYVGITES-GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECV 344
+I K R D+ L G+ PD R + N++ Q EEL L +
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSM 715
Query: 345 EK----SNSK-LGYVVKLLLEEQDI-----------EGDFKKEATE---LFNSISKDVKK 385
E+ +NS+ L +V+ LL+ DI E F EA+ + +S +
Sbjct: 716 EENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKYQ 775
Query: 386 AYCNC----LIDLCVNLNLLEN 403
Y +C + LCVN + EN
Sbjct: 776 EYHSCIRGGIFSLCVNSEVQEN 797
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 131 YEEMKAIG---VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
Y M G V PN+ TY L+ + A R + G + + LL+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 188 YGRARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENC 245
+ D + V R M + G +V YN LL D + EA E+ + M +C
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD +++++I G + +A ++EML+ G PN+ +S+I KAQ D +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 306 ALNRLPELGITPDDRFCGCLLN--VMTQTPKEELGKL 340
L + + G+ P+ R +++ + PKE +G L
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
++ R + D + T+I + +G + + +E+M + P I YN+L+ ++
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + K + EM D G+ + + S++ ++ + ++ ++ M G++ + Y
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+TL+ G DEA ++ M S +PD T++++I ++ +A +F EM
Sbjct: 518 STLIDGYCLAGKMDEATKLLASMVSV-GMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRT 300
+G P++ ++Q + +RT
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRT 600
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R+ P +++LI +D + EM G+ + I +N+++D+ + R +
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES 498
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ ++ M G+ P+ TY++L+ Y A ++ + M GM+ YNTL+
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ ++A +F +M+SS PD T++ ++ + + A+ ++ + E+G +
Sbjct: 559 YCKISRMEDALVLFREMESS-GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRL 310
L ++ K TD+ +R L
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNL 645
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 15/322 (4%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEK----SYDTRARNEKWRIDPNA--FSTLIKLYGTAG 122
K GS P +Y + K S +K + D + K ++P+ ++ ++ G A
Sbjct: 42 KHGSKPNAYTY---KCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKAN 98
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
D ++ MK++G + TY L+ ++GR KR + ++ EM + G +P+ Y
Sbjct: 99 MIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYT 158
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+++ Y +A E + V ++M +K + N+L+ + G T+ A EIFE MK S
Sbjct: 159 NVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKS 218
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
++ +F++M+ C GKV A +EM G +PN +LI C G+A+ +
Sbjct: 219 -GVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASE 277
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC---VEKSNSKLGYVVKLLL 359
+ L + G+TPD C++ + +GK E +EK+ V LL
Sbjct: 278 AYKVLQEMRSAGLTPDVFTYTCMIEAFAKAG--NMGKAFEMFGDMEKAGCSANVVTYNLL 335
Query: 360 EEQDIEGDFKKEATELFNSISK 381
+ ++ ++A +++ + K
Sbjct: 336 IDALVKAGRYQDARDIYFDMKK 357
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++LI G + ++E MK GV N +++N +LD G+A +
Sbjct: 188 DDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFM 247
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN T+ +L+ GRA+Y + V +EM+ G+ V Y ++ A
Sbjct: 248 DEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKA 307
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +AFE+F DM+ + C + T++ +I G+ +A ++ +M + G P+
Sbjct: 308 GNMGKAFEMFGDMEKA-GCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366
Query: 287 LTSLIQCYGKAQ 298
T L Q GK +
Sbjct: 367 ATVLQQLAGKCK 378
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 109/215 (50%), Gaps = 4/215 (1%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++ N ++ GR+ R +V ++E+ +G PN TY ++++ +A +
Sbjct: 13 HVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFL 72
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICS 260
+M + G++ LYN +L DEA ++F MKS C D +T++ +I ++
Sbjct: 73 DKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSM-GCPADDYTYAILIRSLGR 131
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
C+ + EA +F+EM E G P+ T++I Y KA R + + L ++ + + PDD
Sbjct: 132 CK-RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDY 190
Query: 321 FCGCLLNVMTQTPKEELG-KLVECVEKSNSKLGYV 354
L+ +++T + EL ++ E ++KS + V
Sbjct: 191 TLNSLITAVSRTGRTELACEIFERMKKSGVAVNTV 225
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 2/201 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++++ Y GN L V++ +K G++P +++YN+LL + +A++ + + EM
Sbjct: 398 YTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEML 457
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
NG+ P+ Y +L Y R E V++ MK++ + + + Y LL C + G
Sbjct: 458 ANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMH 517
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A E+F+ + + + + T+ +M+ R G+V EAE + + M G +P+ + S
Sbjct: 518 GAAEVFQQITDA-GLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNS 576
Query: 290 LIQCYGKAQRTDDVVRALNRL 310
LI YG + R +D+ L ++
Sbjct: 577 LINAYGVSGRHEDMEALLAKM 597
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 147/342 (42%), Gaps = 48/342 (14%)
Query: 84 SPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
SP+A + K+ D +K + PN ++ ++ Y G+F V+E+M + G+KP
Sbjct: 300 SPQAGNMA-KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKP 358
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++ YN L+ +A R + + + + N L P TY S+L Y + + L V+
Sbjct: 359 DIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVF 418
Query: 202 REMKEKGMQLSVTLYNTLLAMCADV----------------------------------- 226
+K G++ V YN+LL+ A
Sbjct: 419 DRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYART 478
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++AF +F+ MK EN D + +++ C G + A +F ++ +AG + N
Sbjct: 479 GDVEKAFGVFQRMK-KENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQIT 537
Query: 287 LTSLIQ-CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
+++ Y +A R ++ ++ + G PD L+N + + E++ L+ +
Sbjct: 538 YCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKM 597
Query: 345 EKSNSK-----LGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
KS+SK +G L+ + + F A ELF +++
Sbjct: 598 VKSSSKQTKPDIGTYNTLI--QVYAQAGFIPRAEELFQGLAR 637
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+F +K+ AGN L++ EEM GV PN + Y ++D R ++++M
Sbjct: 292 SFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 351
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
GL P+ Y L+ A+ +A + L V ++ + ++ Y ++L G
Sbjct: 352 VSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNI 411
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A E+F+ +K++ +P +++S+++ + ++ A M NEML G P+ + T+
Sbjct: 412 QKALEVFDRIKTA-GLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTA 470
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
L + Y + + R+ + + D G LL
Sbjct: 471 LTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALL 507
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
AGN+ +N ++ + KP + Y L+D R + ++ M + + PN +
Sbjct: 113 AGNWHKIVNAFQVID----KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHI 168
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y SL+ AY AR E ++ EM +G+QL+ ++ ++++ A G + A FE K
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 228
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+EN P ++S++ G + EA+ +M E GF+ NL + T+++ + + +
Sbjct: 229 -AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDE 287
Query: 301 DDVVRALNRL---PELG 314
+ + +RL P+ G
Sbjct: 288 EKCLSFFHRLKVSPQAG 304
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Query: 92 EKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK++ R + E ID A+ L+K +G G V++++ G+K N ITY +
Sbjct: 482 EKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTM 541
Query: 150 LD-TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM---K 205
LD RA R + + + M +G P+ Y SL+ AYG + ED ++ +M
Sbjct: 542 LDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSS 601
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
K + + YNTL+ + A G+ A E+F+ + + PD+ T+++++
Sbjct: 602 SKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGL-ARLKLVPDATTWTALM 651
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 136/337 (40%), Gaps = 29/337 (8%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+++ F ++I Y +AGN + + +E+ KA + P I YN+++ +A V+
Sbjct: 198 QLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEA 257
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR-------------------EMK 205
+ +M + G N Y ++L + R E LS + EM
Sbjct: 258 LLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEMD 317
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+ G+ + +Y ++ A G AF+++EDM S+ +PD ++ ++ G++
Sbjct: 318 KHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA-GLKPDIVIYNILVHAFCKAGRM 376
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+A + + P + TS++ Y K + +R+ G+ P L
Sbjct: 377 DKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSL 436
Query: 326 LNVMTQTPKEELGKLV--ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDV 383
L+ + + + E +L+ E + + L E GD +K A +F + K+
Sbjct: 437 LSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEK-AFGVFQRMKKE- 494
Query: 384 KKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDI 420
N ID+ LL+ C + EV+ I
Sbjct: 495 -----NLAIDIVAYGALLKACCNSGAMHGAAEVFQQI 526
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 106/238 (44%), Gaps = 25/238 (10%)
Query: 97 TRARNEKWR---IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
RA E R I PN +++LI Y A + +G + EEM + G++ N + +++
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 209
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
A + +++ L P Y S+++AY +A E ++ +M+E+G Q
Sbjct: 210 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 269
Query: 212 SVTLYNTLLAMCADV-------------------GYTDEAFEIFEDMKSSENCQPDSWTF 252
++ LY T+L A++ G +A +I E+M P+ +
Sbjct: 270 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEM-DKHGVSPNKMIY 328
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ ++ + G + A ++ +M+ AG +P++ + L+ + KA R D + L +
Sbjct: 329 AMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENI 386
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 3/226 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +S L+ Y AG ++ + +EM+A GVKP+ ++ +L R + WQ +
Sbjct: 193 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGF-RDRGEWQKAFAV 251
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ + Y ++ +G+ + + M+E+G++ V +NTL+
Sbjct: 252 LREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCK 311
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A E+F++M+ S NC + T++ MI + + EAM EM E G PN+
Sbjct: 312 GGRHDRAIELFDEMRES-NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNII 370
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YG++ R + V + + G+ P L+N Q
Sbjct: 371 TYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQ 416
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R E D ++TLI + G D + +++EM+ TYN +++ +G +
Sbjct: 289 RMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQ 348
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R V+ + EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 349 RWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYH 408
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G D A + + M+ ++ + + +S+I +++EA ++ M E
Sbjct: 409 ALVNAYAQRGLADHALNVVKAMR-ADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 467
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G P++ T+L++ + ++ + V + G PD
Sbjct: 468 NGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPD 508
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + ++ +I +G ++ ++ M+ G++P+++T+N L+D + R +
Sbjct: 261 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 320
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM ++ TY ++ G + E ++ EMKE+G+ ++ Y TL+ +
Sbjct: 321 LFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYG 380
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA + E MK ++ +P S + +++ + RG A + M G E +
Sbjct: 381 RSGRFKEAVDCIEAMK-ADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST 439
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
VL SLI +G+ +R + L + E G+ PD
Sbjct: 440 VVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPD 473
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 10/271 (3%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R++P+A FS LI + A D L + +AIG+ P L+ ++G A+R +
Sbjct: 83 RLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEA 142
Query: 163 KTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ ++ E G + P Y +LL+ Y + ++ V EM + G+ Y+ L+
Sbjct: 143 EALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVD 202
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G + A + ++M+ ++ +P S+ FS ++ RG+ +A A+ EM +G
Sbjct: 203 AYTRAGRWESARILLKEME-ADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVR 261
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KL 340
P+ +I +GK + A +R+ E GI PD L++ + + + +L
Sbjct: 262 PDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIEL 321
Query: 341 VECVEKSNSKLG-----YVVKLLLEEQDIEG 366
+ + +SN LG ++ LL EEQ EG
Sbjct: 322 FDEMRESNCPLGTTTYNIMINLLGEEQRWEG 352
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++LI +G +V + MK G++P++ITY L+ + R ++ +V IY+EM
Sbjct: 442 LNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMI 501
Query: 171 DNGLSPNWNTYASL 184
+G +P+ A L
Sbjct: 502 TSGCAPDRKARAML 515
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 45/267 (16%)
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+V ++Y ++ L P+ ++ L+ A+ RAR + L LL
Sbjct: 71 EVPSMYCGGGESRLEPDAPLFSDLISAFARARLPDAALE-------------------LL 111
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG- 279
A +G T P S +++I+ +V+EAEA+F E AG
Sbjct: 112 ASAQAIGLT-----------------PRSNAVTALISSLGSARRVAEAEALFLEFFLAGE 154
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+P +L++ Y K + + L+ + + G+ PD+ L++ T+ + E +
Sbjct: 155 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 214
Query: 340 -LVECVEKSNSK-LGYVVKLLLEEQDIEGDFKKEATELFNSISKDVK--KAYCNCLIDLC 395
L++ +E K YV +L G+++K L + V+ + + N +ID
Sbjct: 215 ILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 274
Query: 396 VNLNLLENAC----KLLELGLTLEVYT 418
N L +A ++ E G+ +V T
Sbjct: 275 GKYNCLGHAMDAFDRMREEGIEPDVVT 301
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 139/285 (48%), Gaps = 24/285 (8%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F++LI+ YG AG F + V++ MK IGV P+++T+N+LL + + R K ++ EM
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 171 DN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
D G++P+ T+ L+R + ++ ++EM V YNTL+ G
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 230 DEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
A + + M K S N P+ T++++I + ++EA ++ EM+ G +PN
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347
Query: 289 SLIQCYGKAQRTDDVVRAL-NRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC---- 343
+LIQ +AQ+ D + L + + G PD C LN + + +GKL E
Sbjct: 348 TLIQGLCEAQKLDKIKEILEGMVGDGGFIPDT----CTLNTLIKA-HCTMGKLEEAFSVF 402
Query: 344 -------VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
V+ ++ +V+ L + GDF++ A E F+ +++
Sbjct: 403 EKMSELRVQPDSATYSVLVRSLCQ----RGDFRR-AEEFFDELAE 442
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI+ + D ++EM P+++TYN L+D + RA + +
Sbjct: 235 DTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVV 294
Query: 167 KEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
K M LSPN TY +L+R Y + + LS+ EM +G++ + YNTL+
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ D+ EI E M PD+ T +++I GK+ EA ++F +M E +P+
Sbjct: 355 EAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDS 414
Query: 285 FVLTSLIQCYGKAQRTD 301
+ L++ QR D
Sbjct: 415 ATYSVLVRSL--CQRGD 429
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++TLI+ Y + L++ EM + G+KPN ITYN L+ + A++ ++K
Sbjct: 304 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIK 363
Query: 164 TIYKEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I + M D G P+ T +L++A+ E+ SV+ +M E +Q Y+ L+
Sbjct: 364 EILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRS 423
Query: 223 CADVGYTDEAFEIFEDMKSSE------NCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
G A E F+++ E C+P ++ M GK +AE +F +++
Sbjct: 424 LCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLM 483
Query: 277 EAG 279
+ G
Sbjct: 484 KRG 486
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY---KEMTDNGLSPNWNTYASL 184
L+ + ++A G N +Y +++ +GR++ + ++ + + + SL
Sbjct: 112 LHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSL 171
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+R+YG A ++++ V++ MKE G+ SV +N+LL++ G T A ++F++M +
Sbjct: 172 IRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYG 231
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTD 301
PD++TF+ +I V E F EM +P++ +L+ GK +
Sbjct: 232 VTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAH 291
Query: 302 DVVRAL 307
+VV+ +
Sbjct: 292 NVVKGM 297
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 15/195 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +TLIK + T G + +V+E+M + V+P+ TY+ L+ ++ + + + +
Sbjct: 378 DTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFF 437
Query: 167 KEMT-------DNGLSP---NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
E+ D G P +N L + G+ + E V+R++ ++G Q +
Sbjct: 438 DELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAE---RVFRQLMKRGTQDPPSYK 494
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+L C + G + F++ M + PD+ T+ MI +G A +ML
Sbjct: 495 TLILGHCRE-GTPEAGFDLLVLMLRRDFV-PDAETYGLMIDGLLKKGDPVLAHKSLEKML 552
Query: 277 EAGFEPNLFVLTSLI 291
++ P + S++
Sbjct: 553 KSSHLPTTAIFHSIL 567
>gi|224112321|ref|XP_002316152.1| predicted protein [Populus trichocarpa]
gi|222865192|gb|EEF02323.1| predicted protein [Populus trichocarpa]
Length = 785
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + + +I +G D +++EMK +P++ +++L+D+MG+A R +
Sbjct: 260 LDVSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKV 319
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM GL P+ Y SL+ +Y +A + L ++ EMK G + + LY ++ A
Sbjct: 320 YMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAK 379
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A IF DM+ + P T+SS++ + + G+V A ++N M AG P L
Sbjct: 380 SGKLDIAMSIFRDMEKA-GFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNAGLRPGLS 438
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+L+ + D + L + +G + D
Sbjct: 439 TYTALLTLLAHKKLVDVAAKILLEMKAMGFSVD 471
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 197/441 (44%), Gaps = 47/441 (10%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ +R FS+L+ G AG + + VY EM+ +G++P+ I Y +L+++ +A +
Sbjct: 289 KERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKL 348
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ EM G PN+ Y ++ ++ ++ + +S++R+M++ G + + Y++L
Sbjct: 349 DAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSSL 408
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L M A G D A +++ M ++ +P T+++++T+ + + V A + EM G
Sbjct: 409 LEMHAASGQVDAAMKLYNSM-TNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKAMG 467
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-----RFCGCLLNVMTQTPK 334
F ++ + ++ Y K D +R L + GI ++ F C+ N + ++ K
Sbjct: 468 FSVDVSA-SDVLMVYIKDGSVDLSLRWLRFMSSSGIRTNNFIIRQLFESCMKNGLYESAK 526
Query: 335 EELGKLVECVEKSN-----SKLGYVVKLLLEEQD-----------------IEGDF---- 368
L V K + S L Y+V+ E+ + + G F
Sbjct: 527 PLLETYVNSAAKVDLILYTSILAYLVRCQEEQNERHLMAILSATRHKAHAFMCGLFTGPE 586
Query: 369 -KKEAT-----ELFNSISKDVK----KAYCNCLIDLCVNLNLLENACKLLELGLTLEVYT 418
+K+ E F I +++ K + N L++ V + + A + ++ +++
Sbjct: 587 QRKQPVLSFVREFFQGIDYELEEGAAKYFVNVLLNYLVLMGQINRARCVWKVAYENKLFP 646
Query: 419 D-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS 477
I WSL +++LS+GAAL A+ ++ K + P + + TG
Sbjct: 647 KAIVFDQHIAWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVIPRRIKLVTGPTLRIVV 706
Query: 478 DKGLASV---FESHLKELNAP 495
+ L+SV FE L AP
Sbjct: 707 AQMLSSVESPFEVSKVVLRAP 727
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 119/242 (49%), Gaps = 7/242 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+ID ++ L+KL+ G +YE M+A ++ TY ++ ++ ++ R
Sbjct: 224 KIDTETYNILMKLFLNKGLPYKAFEIYETMEAAHCSLDVSTYELMIPSLAKSGRLDAAFK 283
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM + P+ ++SL+ + G+A E ++ VY EM+ G++ S +Y +L+
Sbjct: 284 LFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYT 343
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D A ++++MK + +P+ ++ +I + GK+ A ++F +M +AGF P
Sbjct: 344 KAGKLDAALRLWDEMKIA-GFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTP 402
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+SL++ + + + D ++ N + G+ P LL ++ KLV+
Sbjct: 403 STYSSLLEMHAASGQVDAAMKLYNSMTNAGLRPGLSTYTALLTLLAHK------KLVDVA 456
Query: 345 EK 346
K
Sbjct: 457 AK 458
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 6/224 (2%)
Query: 99 ARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP--NMITYNNLLDTMG 154
A+ + W + PN + L + +FDG ++++EM +K YN +L +
Sbjct: 145 AKRQTWYV-PNDECYVMLFDGLNQSRDFDGIQSLFDEMVCDSIKSATQFSAYNRVLKYLA 203
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+A++ +K++ D+G + TY L++ + +Y M+ L V+
Sbjct: 204 KAEKLEVSFCCFKKVQDSGCKIDTETYNILMKLFLNKGLPYKAFEIYETMEAAHCSLDVS 263
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
Y ++ A G D AF++F++MK N +P FSS++ G++ + ++ E
Sbjct: 264 TYELMIPSLAKSGRLDAAFKLFQEMK-ERNFRPSLGIFSSLVDSMGKAGRLETSMKVYME 322
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M G P+ + SLI+ Y KA + D +R + + G P+
Sbjct: 323 MQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPN 366
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 3/215 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI G D + + +M+ V P +TYN+L+ + +A+R +
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAY 135
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM +G P+ TY +L+ + +++ +D L V+ ++ +G + V Y+ L+
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA ++F M S +C P++ T++S+I+ GK+ EA + M E G P+
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ T+L+ + K R DD LN++ G+TPD
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+ +TY +L+ + + KR Q +M G P+ TY +++ A +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
EM + + +V Y L+ G DEA + M+ + C P + T++S+I+
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR--KKCVPTAVTYNSLISGLCK 127
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
+ SEA + EM+ +G P++F T+LI + K++++DD +R +L G PD
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 322 CGCLLN 327
CL++
Sbjct: 188 YSCLID 193
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 15/226 (6%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++LI + G D +N+ E M G P+++TY L++ + R +
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+MT GL+P+ T+ SL+ R D + + EM+ K +V YNT+L
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Query: 226 VGYTDEAFE-IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+EA + + E+M +C P+ +F+ MI + SEA + E P++
Sbjct: 339 ANQLEEARKFMLEEM----DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+ T++I + ++ D+ R ++ E P GCL N +T
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKMLE---EP-----GCLPNSIT 432
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI+ + L +M + G P++ TY ++ + R + +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + L+PN TY L+ + ++ +++ +M++K + +VT YN+L++
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVT-YNSLISGLCKA 128
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA+++ E+M S C PD +T++++IT K +A +F +++ GF P++
Sbjct: 129 ERASEAYDLLEEMVYS-GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELG 314
+ LI K R + + R+ + G
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 8/218 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+R D +S LI G ++++ M K+ PN +TYN+L+ R + +
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-A 221
+ + M + G SP+ TY +L+ + + +D + +M KG+ V + +L+
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGF 280
+C + +D A I +M+ ++C P +T+++++ CR ++ EA E E
Sbjct: 301 LCRENRLSD-AVHILGEMR-RKSCSPTVYTYNTILD-GYCRANQLEEARKFMLE--EMDC 355
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ +I+ K R+ + + + PD
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 101/248 (40%), Gaps = 38/248 (15%)
Query: 68 GKTGSSPK--SYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGN 123
+TGSSP +Y + + ++L + +YD + + + P+ F++L+
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDD-AYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+++ EM+ P + TYN +LD RA + + + E D PN ++
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNI 364
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
++R + + + + E + + V +Y T++ DEA ++ M
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424
Query: 244 NCQPDSWTFSSMIT-ICSC------RGKVS------------------------EAEAMF 272
C P+S T+S++IT +C+ RG + +A +
Sbjct: 425 GCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELL 484
Query: 273 NEMLEAGF 280
++M++ GF
Sbjct: 485 DDMVQRGF 492
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 3/215 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI G D + + +M+ V P +TYN+L+ + +A+R +
Sbjct: 77 LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAY 135
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM +G P+ TY +L+ + +++ +D L V+ ++ +G + V Y+ L+
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA ++F M S +C P++ T++S+I+ GK+ EA + M E G P+
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ T+L+ + K R DD LN++ G+TPD
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+ +TY +L+ + + KR Q +M G P+ TY +++ A +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
EM + + +V Y L+ G DEA + M+ + C P + T++S+I+
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR--KKCVPTAVTYNSLISGLCK 127
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
+ SEA + EM+ +G P++F T+LI + K++++DD +R +L G PD
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 322 CGCLLN 327
CL++
Sbjct: 188 YSCLID 193
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 15/226 (6%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++LI + G D +N+ E M G P+++TY L++ + R +
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+MT GL+P+ T+ SL+ R D + + EM+ K +V YNT+L
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Query: 226 VGYTDEAFE-IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+EA + + E+M +C P+ +F+ MI + SEA + E P++
Sbjct: 339 ANQLEEARKFMLEEM----DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+ T++I + ++ D+ R ++ E P GCL N +T
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKMLE---EP-----GCLPNSIT 432
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI+ + L +M + G P++ TY ++ + R + +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + L+PN TY L+ + ++ +++ +M++K + +VT YN+L++
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVT-YNSLISGLCKA 128
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA+++ E+M S C PD +T++++IT K +A +F +++ GF P++
Sbjct: 129 ERASEAYDLLEEMVYS-GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELG 314
+ LI K R + + R+ + G
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 8/218 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+R D +S LI G ++++ M K+ PN +TYN+L+ R + +
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-A 221
+ + M + G SP+ TY +L+ + + +D + +M KG+ V + +L+
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGF 280
+C + +D A I +M+ ++C P +T+++++ CR ++ EA E E
Sbjct: 301 LCRENRLSD-AVHILGEMR-RKSCSPTVYTYNTILD-GYCRANQLEEARKFMLE--EMDC 355
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ +I+ K R+ + + + PD
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 101/248 (40%), Gaps = 38/248 (15%)
Query: 68 GKTGSSPK--SYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGN 123
+TGSSP +Y + + ++L + +YD + + + P+ F++L+
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDD-AYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+++ EM+ P + TYN +LD RA + + + E D PN ++
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNI 364
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
++R + + + + E + + V +Y T++ DEA ++ M
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424
Query: 244 NCQPDSWTFSSMIT-ICSC------RGKVS------------------------EAEAMF 272
C P+S T+S+++T +C+ RG + +A +
Sbjct: 425 GCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELL 484
Query: 273 NEMLEAGF 280
++M++ GF
Sbjct: 485 DDMVQRGF 492
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 139/285 (48%), Gaps = 24/285 (8%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F++LI+ YG AG F + V++ MK IGV P+++T+N+LL + + R K ++ EM
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 171 DN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
D G++P+ T+ L+R + ++ ++EM V YNTL+ G
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287
Query: 230 DEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
A + + M K S N P+ T++++I + ++EA ++ EM+ G +PN
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347
Query: 289 SLIQCYGKAQRTDDVVRAL-NRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC---- 343
+LIQ +AQ+ D + L + + G PD C LN + + +GKL E
Sbjct: 348 TLIQGLCEAQKLDKIKEILEGMVGDGGFIPDT----CTLNTLIKA-HCTMGKLEEAFSVF 402
Query: 344 -------VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
V+ ++ +V+ L + GDF++ A E F+ +++
Sbjct: 403 EKMSELRVQPDSATYSVLVRSLCQ----RGDFRR-AEEFFDELAE 442
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI+ + D ++EM P+++TYN L+D + RA + +
Sbjct: 235 DTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVV 294
Query: 167 KEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
K M LSPN TY +L+R Y + + LS+ EM +G++ + YNTL+
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ D+ EI E M PD+ T +++I GK+ EA ++F +M E +P+
Sbjct: 355 EAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDS 414
Query: 285 FVLTSLIQCYGKAQRTD 301
+ L++ QR D
Sbjct: 415 ATYSVLVRSL--CQRGD 429
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++TLI+ Y + L++ EM + G+KPN ITYN L+ + A++ ++K
Sbjct: 304 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIK 363
Query: 164 TIYKEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I + M D G P+ T +L++A+ E+ SV+ +M E +Q Y+ L+
Sbjct: 364 EILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRS 423
Query: 223 CADVGYTDEAFEIFEDMKSSE------NCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
G A E F+++ E C+P ++ M GK +AE +F +++
Sbjct: 424 LCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLM 483
Query: 277 EAG 279
+ G
Sbjct: 484 KRG 486
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY---KEMTDNGLSPNWNTYASL 184
L+ + ++A G N +Y +++ +GR++ + ++ + + + SL
Sbjct: 112 LHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSL 171
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+R+YG A ++++ V++ MKE G+ SV +N+LL++ G T A ++F++M +
Sbjct: 172 IRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYG 231
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTD 301
PD++TF+ +I V E F EM +P++ +L+ GK +
Sbjct: 232 VTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAH 291
Query: 302 DVVRAL 307
+VV+ +
Sbjct: 292 NVVKGM 297
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 15/195 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +TLIK + T G + +V+E+M + V+P+ TY+ L+ ++ + + + +
Sbjct: 378 DTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFF 437
Query: 167 KEMT-------DNGLSP---NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
E+ D G P +N L + G+ + E V+R++ ++G Q +
Sbjct: 438 DELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAE---RVFRQLMKRGTQDPPSYK 494
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+L C + G + F++ M + PD+ T+ MI +G A +ML
Sbjct: 495 TLILGHCRE-GTPEAGFDLLVLMLRRDFV-PDAETYGLMIDGLLKKGDPVLAHKSLEKML 552
Query: 277 EAGFEPNLFVLTSLI 291
++ P + S++
Sbjct: 553 KSSHLPTTAIFHSIL 567
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 119/227 (52%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ + N++TYN+++ G+
Sbjct: 180 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHE 239
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+A + ++++++ G+++ LY T++
Sbjct: 240 KANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 299
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++KS +N D + I I + G++ EA +F + ++AG
Sbjct: 300 VAYEKAGLVAHAKRLLHELKSPDNIPRD-----TAIHILAGAGRIEEATYVFRQAIDAGE 354
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 355 VRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLN 401
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++TL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 115 PNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 174
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K + +V YN+++ +
Sbjct: 175 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 234
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 235 TLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQV 293
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y KA R L+ L P D
Sbjct: 294 LYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRD 327
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 11 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 70
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y TLL M +
Sbjct: 71 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVEN 130
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 131 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 189
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 190 YNTLLRVYGDAE 201
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 46 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 105
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y +LL Y + + LSV+ EM+E
Sbjct: 106 SEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 165
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + T
Sbjct: 166 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIVQNVVT 224
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GKA + D +L
Sbjct: 225 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLR 284
Query: 312 ELGITPD 318
G+ D
Sbjct: 285 SSGVEID 291
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM + LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 62 DYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 120
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 TTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 164
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + AG + V+ + G ++ + ++ + K+ V ++ +M
Sbjct: 328 TAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGL 387
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
G P+ N A +L AYG+ + VY EM+E G
Sbjct: 388 GYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVG 423
>gi|255661218|gb|ACU25778.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 426
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 119/227 (52%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN ++ G+
Sbjct: 177 KMEIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + +EAG
Sbjct: 297 ITYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATWVFRQAIEAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +++ +++ +G PD R +LN
Sbjct: 352 VKDITVFEHMIDLFSKYKKYSNIIEVFDKMRGIGYFPDSRVIALVLN 398
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++IT N ++D G+ + +
Sbjct: 112 PNTISYSTLLTMYVENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKL 171
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ + PN +Y +LLR YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 172 FWGXRKMEIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGK 231
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ + +P++ T+S++I+I GK+ A +F ++ +G E +
Sbjct: 232 TLEHEKANNLIQEMQ-NRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQV 290
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 291 LYQTMIITYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+ P+++ YN++++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 GEMRTAGVMPNTISYSTLLTMYVENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQL 162
Query: 207 -------------KGMQL--SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ M++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGXRKMEIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++M+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
GI D
Sbjct: 282 SSGIEID 288
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G++P+ Y S++ +G+A+ ++ S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F + EPN+
Sbjct: 128 KKFIEALSVFAEMREIQ-CSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
LSP+ TY++L+ +G+ +D LS ++M+E + + LY+ L+ + + +A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
IF +K S PD ++SMI + EA ++ EM AG PN ++L+
Sbjct: 64 ISIFSRLKRS-GITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLT 122
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
Y + ++ + + + E+ + D C +++V Q
Sbjct: 123 MYVENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQ 161
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 52/115 (45%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + +++D
Sbjct: 306 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIEAGEVKDITVFEHMIDLF 365
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ + ++ +M G P+ A +L AYG+ + + VY EM+++G
Sbjct: 366 SKYKKYSNIIEVFDKMRGIGYFPDSRVIALVLNAYGKLQEFDKANEVYMEMQDEG 420
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 119/227 (52%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ + N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+A + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++KS +N D + I I + G++ EA +F + ++AG
Sbjct: 297 VAYEKAGLVAHAKRLLHELKSPDNIPRD-----TAIHILAGAGRIEEATYVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 109/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++TL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 110 VMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K + +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y KA R L+ L P D
Sbjct: 289 QVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRD 324
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y +LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIVQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GKA + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN T+L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 161
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + AG + V+ + G ++ + ++ + K+ V ++ +M
Sbjct: 325 TAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGL 384
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
G P+ N A +L AYG+ + VY EM+E G
Sbjct: 385 GYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVG 420
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 11/223 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ ++ + AG D V+ EM+ G+ PN+ TY ++D M RA + + + + +M
Sbjct: 243 YTAVVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMI 302
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD-VGY 228
D+G PN T+ +++R++ +A E L V+ +M++ + V YN L+ C G
Sbjct: 303 DSGCPPNTTTFNAIMRSHVKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGN 362
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A ++ + M +++ C PD TF+ M + G + A ++ +M E +PN+
Sbjct: 363 LDAALKVLDKM-TAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYN 421
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
L++ + K + D V+R + GI P+ + FCG
Sbjct: 422 CLLRLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCG 464
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ + +L GN +YE+M+ + KPN++TYN LL + K V +
Sbjct: 381 DCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNKEKSMDMVLRMK 440
Query: 167 KEMTDNGLSPNWNTYASLLRAY-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K+M G+ PN +TYA+L+ A+ GR + ++ ++EK + S + + +L +
Sbjct: 441 KDMDAEGIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIEEKSFKPSKQVRDMVLVLLRK 500
Query: 226 VGYTDEAFEIFEDM 239
G + E+ E M
Sbjct: 501 AGQLKKHEELVELM 514
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 86/208 (41%), Gaps = 36/208 (17%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y +++ + + + + + EM + + + +L R Y RA + ++R M+
Sbjct: 138 YASMIVLLAKHRHFGLARHLLDEMRERAVPISRQLILALTRRYVRAEMPSEAADLFRRME 197
Query: 206 EKG-----------------------------------MQLSVTLYNTLLAMCADVGYTD 230
E G V LY ++ G D
Sbjct: 198 EYGAGAPDPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRAGRLD 257
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F +M+ S P+ +T++++I G+V A+ + +M+++G PN ++
Sbjct: 258 EAERVFTEMQQS-GIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTTTFNAI 316
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + KA R++ V++ N++ +L PD
Sbjct: 317 MRSHVKAGRSEQVLQVHNQMQQLRCEPD 344
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 92/209 (44%), Gaps = 7/209 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLY--GTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
E+ + ++ R +P+ ++ LI+ + GN D L V ++M A P+ T+N
Sbjct: 327 EQVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGNLDAALKVLDKMTAKKCVPDCHTFN 386
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
+ + +Y++M + PN TY LLR + + + + L + ++M +
Sbjct: 387 PMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNKEKSMDMVLRMKKDMDAE 446
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++ ++ Y L+ G A ++M ++ +P ++ + G++ +
Sbjct: 447 GIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIEEKSFKPSKQVRDMVLVLLRKAGQLKK 506
Query: 268 AEAMFNEMLEAGF---EPNLFVLTSLIQC 293
E + M++ GF PN + ++L C
Sbjct: 507 HEELVELMVDRGFISQPPNDALWSALSAC 535
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
+ YAS++ + R+ + EM+E+ + +S L L EA ++F
Sbjct: 136 DLYASMIVLLAKHRHFGLARHLLDEMRERAVPISRQLILALTRRYVRAEMPSEAADLFRR 195
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
M+ PD T +S++ S + SEA+A+F+ F P++ + T+++ + +A
Sbjct: 196 MEEYGAGAPDPATLASLLAALSKKRLASEAQALFDS-CRTVFTPDVVLYTAVVHAWCRAG 254
Query: 299 RTDDVVRALNRLPELGITPD 318
R D+ R + + GI P+
Sbjct: 255 RLDEAERVFTEMQQSGIMPN 274
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+T+I Y G D L + M+ +GV+ ++ TYN L + R R + KT+ M
Sbjct: 146 FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMI 205
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ PN+ TY +L+ + + + ++REM EKG SV YN ++ A G
Sbjct: 206 EMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIR 265
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E F + PD +T++S++ GKV A +F EM + G EPN+ T+L
Sbjct: 266 EA-ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTAL 324
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
I K R++ + + + + G+ PDD
Sbjct: 325 ISGLAKEGRSEAAFQLYDDMLKAGLIPDD 353
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 1/197 (0%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G G V +E GV+PN TY L++ + + + + +M G+ N +
Sbjct: 87 GTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 146
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+++ Y R +D L + M++ G++L + YNTL V DEA + M
Sbjct: 147 NTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 206
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
P+ T++++I+I G + EA +F EM E G P++ +I Y K
Sbjct: 207 M-GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIR 265
Query: 302 DVVRALNRLPELGITPD 318
+ R + + G PD
Sbjct: 266 EAERFRKEMEKKGFVPD 282
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 29/238 (12%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ P A S ++ +G D + ++M GV N + YN+LLD R K +V+ I
Sbjct: 12 VSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEI 71
Query: 166 YK------------------------EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+ E NG+ PN TY L+ + + E +
Sbjct: 72 LEIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLL 131
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS- 260
+M+ +G+ L+ ++NT++ G D+A +I M+ + D +T++++ C
Sbjct: 132 ADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKM-GVELDIYTYNTL--ACGL 188
Query: 261 CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
CR ++ EA+ + + M+E G PN T+LI + K + R + E G TP
Sbjct: 189 CRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 246
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M +GV PN +TY L+ + + + +++EM + G +P+ TY ++ Y +
Sbjct: 204 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGS 263
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
+ +EM++KG V Y +L+ C + G D A ++FE+MK +P+ +
Sbjct: 264 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVN-GKVDVALKLFEEMK-QRGTEPNVVAY 321
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+++I+ + G+ A ++++ML+AG P+ + ++L+ R D
Sbjct: 322 TALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 370
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 126/266 (47%), Gaps = 6/266 (2%)
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW 178
G A D ++ MK++G + TY L+ ++GR KR + ++ EM + G +P+
Sbjct: 95 GKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSA 154
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
Y +++ Y +A E + V ++M +K + N+L+ + G T+ A EIFE
Sbjct: 155 PAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFER 214
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
MK S ++ +F++M+ C GKV A +EM G +PN +LI C G+A+
Sbjct: 215 MKKS-GVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAK 273
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC---VEKSNSKLGYVV 355
+ + L + G+TPD C++ + +GK E +EK+ V
Sbjct: 274 YASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAG--NMGKAFEMFGDMEKAGCSANVVT 331
Query: 356 KLLLEEQDIEGDFKKEATELFNSISK 381
LL + ++ ++A +++ + K
Sbjct: 332 YNLLIDALVKAGRYQDARDIYFDMKK 357
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++LI G + ++E MK GV N +++N +LD G+A +
Sbjct: 188 DDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFM 247
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN T+ +L+ GRA+Y + V +EM+ G+ V Y ++ A
Sbjct: 248 DEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKA 307
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +AFE+F DM+ + C + T++ +I G+ +A ++ +M + G P+
Sbjct: 308 GNMGKAFEMFGDMEKA-GCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366
Query: 287 LTSLIQCYGKAQ 298
T L Q GK +
Sbjct: 367 ATVLQQLAGKCK 378
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 3/192 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+ G + +++EM+ G P+ Y N++D +A R +
Sbjct: 118 DDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVL 177
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K+M D L+P+ T SL+ A R E ++ MK+ G+ ++ +N +L C
Sbjct: 178 KKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKA 237
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLF 285
G A++ ++M+ + +P+S TF+++I C R K SEA + EM AG P++F
Sbjct: 238 GKVGLAYQFMDEME-ARGIKPNSITFNTLIN-CLGRAKYASEAYKVLQEMRSAGLTPDVF 295
Query: 286 VLTSLIQCYGKA 297
T +I+ + KA
Sbjct: 296 TYTCMIEAFAKA 307
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 109/215 (50%), Gaps = 4/215 (1%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++ N ++ GR+ R +V ++E+ +G PN TY ++++ +A + +
Sbjct: 13 HVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELL 72
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICS 260
+M + G++ L N +L DEA ++F MKS C D +T++ +I ++
Sbjct: 73 DKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSM-GCPADDYTYAILIRSLGR 131
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
C+ + EA +F+EM E G P+ T++I Y KA R + + L ++ + + PDD
Sbjct: 132 CK-RDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDY 190
Query: 321 FCGCLLNVMTQTPKEELG-KLVECVEKSNSKLGYV 354
L+ +++T + EL ++ E ++KS + V
Sbjct: 191 TLNSLITAVSRTGRTELACEIFERMKKSGVAVNTV 225
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D Y EM G+ PN++TY++++ + +A+ + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ PN TY S++ Y + ++ + ++M G++ V YN+L+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F+ M + +P+ T+ +++ + +G + E + + M+ G PN +V
Sbjct: 318 GRCTEARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y K + D + +++ + G+ PD G ++ ++ ++ + E
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 131 YEEMKAIG---VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
Y M G V PN+ TY L+ + A R + G + + LL+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 188 YGRARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENC 245
+ D + V R M + G +V YN LL D + EA E+ + M +C
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD +++++I G + +A ++EML+ G PN+ +S+I KAQ D +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 306 ALNRLPELGITPDDRFCGCLLN--VMTQTPKEELGKL 340
L + + G+ P+ R +++ + PKE +G L
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 103/238 (43%), Gaps = 41/238 (17%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+ + K + PN +++++ Y ++G + ++M + GV+P+++TYN+L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 150 LDTMGRAKRPWQVKTIYKEMTD-----------------------------------NGL 174
+D + + R + + ++ MT NG+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
PN ++ L+ AY + + + V+ +M+++G+ Y T++ + G ++A
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
FE M E P + ++S+I K +A+ F L+ E ++ L SLIQ
Sbjct: 431 YFEQM-IDERLSPGNIVYNSLIHSLCIFDKWDKAKDYF---LKCWIEAFVWTLFSLIQ 484
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 59 HSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLY 118
HS + P T +S Y+ N + A K+ +D+ + + + + TL++ Y
Sbjct: 296 HSDGVE-PDVVTYNSLMDYLCKNGRCTEARKM----FDSMTK-RGLKPEITTYGTLLQGY 349
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW 178
T G + + M G+ PN ++ L+ + + Q ++ +M GL+P+
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
TY +++ ++ ED + + +M ++ + +YN+L+
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S+LI AG + L V E MK +PN++++ LL + + + I+
Sbjct: 391 DVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIF 450
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M D+G PN + SLL AY + R + L +++E GM+L V ++T ++ A
Sbjct: 451 HAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKA 510
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A E F+ M S C P+ T+SS+I G +AE++F ML G PN
Sbjct: 511 GQWELAEEKFKQMTKS-GCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQA 569
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL-PELGITPD 318
+L++ YGK + + V+ + P+ G+ PD
Sbjct: 570 CCALLRAYGKGKELEKVIIFFESMEPQYGVEPD 602
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EK I P+ F+ L+ AG +D + + M+A G + Y + RA++P
Sbjct: 279 EKLGIVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKP 338
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++ M + G +Y +LL AY R ED + + +++KG+ V +++L
Sbjct: 339 REAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSL 398
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++ CA+ G + A E+ E MK+S +CQP+ ++ ++ G +AE +F+ ML++G
Sbjct: 399 ISACANAGQAERALEVLERMKTS-DCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSG 457
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN SL+ Y K ++ V+ + +L ELG+ D
Sbjct: 458 CPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLD 496
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+D + + ++ G N+ V+ ++ GV+PN L+ +G +R Q
Sbjct: 179 RVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQALK 238
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++ M G+ T+ +L+ A GR G+ + ++ EM++ G+ + L++
Sbjct: 239 LFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATT 298
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D A + F DM + + M C+ K EA +F MLE G+E L
Sbjct: 299 AAGLWDRA-QSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKL 357
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ Y + + +D +R + + G+TPD
Sbjct: 358 ESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPD 391
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN A+ +L+ Y + L E+++ +G+K +++ ++ + + +A + +
Sbjct: 460 PNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEK 519
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+K+MT +G PN TY+SL++AYG E SV++ M G++ + LL
Sbjct: 520 FKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGK 579
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++ FE M+ +PD + ++++ C G+ A + M AG P+
Sbjct: 580 GKELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSV 639
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRL 310
+ T+LI Y + D ++ L R+
Sbjct: 640 IYTTLINMYEANGQIDKAMQVLERM 664
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D A+ST I AG ++ +++M G PN++TY++L+ G + ++
Sbjct: 494 KLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAES 553
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK-EKGMQLSVTLYNTLLAMC 223
++K M G+ PN +LLRAYG+ + E + + M+ + G++ Y + C
Sbjct: 554 VFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDKYAYAAIFWAC 613
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
G A + + M+ + C PDS ++++I + G++ +A + M
Sbjct: 614 WTCGEWQRAVKYIDRMEMA-GCTPDSVIYTTLINMYEANGQIDKAMQVLERM 664
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++T++++YG A F ++++ M+ ++ N++TYN ++ G+
Sbjct: 226 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 285
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+A + +++++++ G+++ LY T++
Sbjct: 286 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 345
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
VG A + ++K PD+ + ITI + G+ EA +F + E+G
Sbjct: 346 VAYERVGLMGHAKRLLHELK-----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGE 400
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I Y + QR +V+ ++ G PD +LN
Sbjct: 401 VKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLN 447
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ R + +I+
Sbjct: 57 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF 116
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G++P+ Y S++ YG+A+ + + +EM E G+ + Y+TLL++ +
Sbjct: 117 SRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVEN 176
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +MK NC D T + MI + V EA+ +F + + EPN+
Sbjct: 177 HKFLEALSVFAEMKEV-NCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 235
Query: 287 LTSLIQCYGKAQ 298
++++ YG+A+
Sbjct: 236 YNTILRVYGEAE 247
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+ P+++ YN++++ G+AK + + +
Sbjct: 92 DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLI 151
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + G+ PN +Y++LL Y + LSV+ EMKE L +T N ++ + +
Sbjct: 152 KEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 211
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F ++ + +P+ ++++++ + EA +F M E N+
Sbjct: 212 DMVKEADRLFWSLRKM-DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVT 270
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I+ YGK + + + GI P+
Sbjct: 271 YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 302
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+EE K P++ YN +L + RAK+ ++ EM L+P+ TY++L+ ++G
Sbjct: 13 VHEEAK---YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 69
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ + LS ++M++ + + LY+ L+ + + +A IF +K S PD
Sbjct: 70 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRS-GITPDL 128
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++SMI + EA + EM EAG PN ++L+ Y + + + +
Sbjct: 129 VAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAE 188
Query: 310 LPELGITPDDRFCGCLLNVMTQ 331
+ E+ D C +++V Q
Sbjct: 189 MKEVNCALDLTTCNIMIDVYGQ 210
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 48/209 (22%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + AG + V+ + G ++ + +++ R +R V ++++M
Sbjct: 374 TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 433
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G P+ N A +L AYG+ R E +VYREM+E+G C
Sbjct: 434 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG--------------C--------- 470
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL------FV 286
+F PD F M+++ S + E++F + LE+ +PN+ V
Sbjct: 471 --VF----------PDEVHF-QMLSLYSSKKDFEMVESLF-QRLES--DPNVNSKELHLV 514
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ +L Y +A + +D R +NR+ E GI
Sbjct: 515 VAAL---YERADKLNDASRVMNRMRERGI 540
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 86 RASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A + +E ++ R E + D + F +I LY + + V+E+M+ G P+
Sbjct: 381 KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 440
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
+L+ G+ + + T+Y+EM + G
Sbjct: 441 VIAMVLNAYGKQREFEKADTVYREMQEEG 469
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 119/227 (52%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 180 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 239
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 240 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 299
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++KS +N D + I I + G++ EA +F + ++AG
Sbjct: 300 VAYERAGLVAHAKRLLHELKSPDNIPRD-----TAIHILAGAGRIEEATYVFRQAIDAGE 354
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 355 VKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLN 401
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 115 PNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 174
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 175 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 234
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 235 TLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQV 293
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 294 LYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD 327
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 11 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 70
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G P+ Y +++ +G+A+ + ++ EMK G+ + Y+TLL M +
Sbjct: 71 SRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVEN 130
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 131 KKFIEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 189
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 190 YNTLLRVYGDAE 201
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + + +
Sbjct: 46 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALI 105
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 106 SEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 165
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 166 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 224
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 225 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 284
Query: 312 ELGITPD 318
G+ D
Sbjct: 285 SSGVEID 291
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM + LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A IF +K S PD +++MI + EA A+ +EM AG PN
Sbjct: 62 DYSKAISIFSRLKRS-GFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASY 120
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 STLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 164
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + AG + V+ + G ++ + ++ + K+ V ++ +M
Sbjct: 328 TAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGL 387
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
G P+ N A +L AYG+ + VY EM+E G
Sbjct: 388 GYFPDSNVIALVLNAYGKLHELDKANDVYMEMQEVG 423
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 36/261 (13%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K R+ P+ AF +I+ + AG+ L++ + M+ G P ++TYN L+ + R +
Sbjct: 549 QKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQV 608
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M+ G++PN +TY ++R Y + ++KE G++L V +Y TL
Sbjct: 609 ERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETL 668
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE--------NCQPDSW--------------------- 250
L C G A + +M S + N D W
Sbjct: 669 LRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGV 728
Query: 251 -----TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
T++S I C G + A+ + +EM + G +PNL T+LI+ + +A D ++
Sbjct: 729 PPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALK 788
Query: 306 ALNRLPELGITPDDRFCGCLL 326
+ G+ PD+ CL+
Sbjct: 789 CFEEMKLAGLKPDEAAYHCLV 809
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+A+ +++ Y + CL V+E +K P++I+Y L++ + + + I KE
Sbjct: 418 DAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKE 477
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M +G+ N TY+ L+ + + ++ EM + G+Q +YN L+ +G
Sbjct: 478 MESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGN 537
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A I E M+ E QP + F +I + G + A + + M +G P +
Sbjct: 538 MDRAIRILEKMQ-KERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYN 596
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + + + V LN++ GITP++
Sbjct: 597 ALIHGLIRKNQVERAVSVLNKMSIAGITPNE 627
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 41/266 (15%)
Query: 95 YDTRARNEKWR---IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+ RA E R I+PNAF ++L+ Y A + G L+ EEMKA G++ ++TY+ L
Sbjct: 294 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSIL 353
Query: 150 LDTMGRAKRPWQVKTIYK-----------------------------------EMTDNGL 174
+ G+ ++K EM ++G+
Sbjct: 354 ISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGI 413
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+ Y S++ Y + + L V+ +KE S+ Y L+ + +G +A
Sbjct: 414 DAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIA 473
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
I ++M+SS + ++ T+S +I+ + A +F EML++G +P+ + LI+ +
Sbjct: 474 ISKEMESS-GIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAF 532
Query: 295 GKAQRTDDVVRALNRLPELGITPDDR 320
K D +R L ++ + + P +R
Sbjct: 533 CKMGNMDRAIRILEKMQKERMQPSNR 558
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y T+ + ++D + TL++ +G L V EM + + N YN L+D
Sbjct: 649 YFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWA 708
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R W+ + K+M ++G+ PN +TY S + A +A + +V EM + G++ ++
Sbjct: 709 RRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLK 768
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
Y TL+ A D A + FE+MK + +PD + ++T R V E
Sbjct: 769 TYTTLIKGWARASLPDRALKCFEEMKLA-GLKPDEAAYHCLVTSLLSRATVMEG 821
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 120/305 (39%), Gaps = 44/305 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F +I Y G+ +E M+A G++PN +
Sbjct: 280 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT----------------------- 316
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
SL+ AY AR LS EMK +G++L++ Y+ L++ + T
Sbjct: 317 ------------SLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQ 364
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A +F++ K++ + +S++I G + AE + +EM E G + + S+
Sbjct: 365 SADNLFKEAKTNLG-DLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSM 423
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE----ELGKLVEC--V 344
+ Y Q + RL E TP GCL+N+ + K + K +E +
Sbjct: 424 MHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGI 483
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENA 404
+ +N ++ + D F+ L + + D +A N LI+ + ++ A
Sbjct: 484 KHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPD--RAIYNLLIEAFCKMGNMDRA 541
Query: 405 CKLLE 409
++LE
Sbjct: 542 IRILE 546
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%)
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+P F MI + RG A A F M G EPN FV TSL+ Y A+
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 326
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 5/237 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ L+K Y G+ V EM+ GVKP+ TY+ L+D A R + + KEM
Sbjct: 329 AYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEM 388
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + PN Y+ +L +Y + + V ++MK G+Q YN ++
Sbjct: 389 EASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCL 448
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A FE M SE +PD+ T++++I C C+ G+ + AE +F EM + G+ P +
Sbjct: 449 DHAMATFERML-SEGIRPDTVTWNTLIN-CHCKSGRHNMAEELFGEMQQRGYSPCITTYN 506
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+I G+ QR + V L+++ G+ P+ L++V ++ + +EC+E
Sbjct: 507 IMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGR--FSDAIECLE 561
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 4/240 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E R D ++TLI + +G + ++ EM+ G P + TYN ++++MG +
Sbjct: 457 RMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQ 516
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R QV +M GL PN TY +L+ YG++ D + +K G + + T+YN
Sbjct: 517 RWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYN 576
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G ++ A F M ++E P +S+I + +EA A+ M E
Sbjct: 577 ALINAYAQRGLSELAVNAFRLM-TTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 635
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL---LNVMTQTPK 334
EP++ T+L++ + ++ V + G TPD + L L M QT K
Sbjct: 636 NNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRSALRYMKQTLK 695
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++ +I +G D + +E M + G++P+ +T+N L++ ++ R + ++
Sbjct: 431 DRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELF 490
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G SP TY ++ + G + E +M+ +G+ + Y TL+ +
Sbjct: 491 GEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKS 550
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E E +KS+ +P S ++++I + RG A F M G P+L
Sbjct: 551 GRFSDAIECLEVLKST-GFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLA 609
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L SLI +G+ +R + L + E I PD L+ + + K
Sbjct: 610 LNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEK 657
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 112/240 (46%), Gaps = 2/240 (0%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
S + +K Y T +K ID + + +I + AG+ + ++ G+ P T
Sbjct: 238 SPILQKLY-TEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLV 296
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
++ +G + R + + +++E+ +NG P Y +LL+ Y + +D V EM++
Sbjct: 297 AVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKA 356
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++ Y+ L+ A G + A + ++M++S N +P+S+ +S ++ +G+ +
Sbjct: 357 GVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEAS-NVEPNSYVYSRILASYRDKGEWQK 415
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ + +M G +P+ +I +GK D + R+ GI PD L+N
Sbjct: 416 SFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIN 475
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 120/283 (42%), Gaps = 30/283 (10%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSY----DTRARNEKWR-------------IDPNAF 111
KTGS + V+ K E++Y D A +W ++PN++
Sbjct: 339 KTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSY 398
Query: 112 --STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
S ++ Y G + V ++MK+ GV+P+ YN ++DT G+ ++ M
Sbjct: 399 VYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERM 458
Query: 170 TDNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
G+ P+ WNT + GR E+ ++ EM+++G +T YN M +
Sbjct: 459 LSEGIRPDTVTWNTLINCHCKSGRHNMAEE---LFGEMQQRGYSPCITTYNI---MINSM 512
Query: 227 GYTD--EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G E +F S+ P+S T+++++ + G+ S+A + GF+P
Sbjct: 513 GEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTS 572
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ +LI Y + ++ V A + G+TP L+N
Sbjct: 573 TMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLIN 615
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 7/282 (2%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL--SVY 201
+TYN L+ R + + +M +G P++ Y+S+++ R+ + + +Y
Sbjct: 186 LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLY 245
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
E++ +++ L N ++ + G A F M S P T ++I
Sbjct: 246 TEIETDKIEIDGHLMNDIILGFSKAGDPTRAMR-FLAMAQSNGLNPKPSTLVAVILALGN 304
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ EAEA+F E+ E G EP +L++ Y K D ++ + + G+ PD++
Sbjct: 305 SGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQT 364
Query: 322 CGCLLNVMTQTPKEELGKLV-ECVEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSI 379
L++ + E ++V + +E SN + YV +L +G+++K L +
Sbjct: 365 YSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMK 424
Query: 380 SKDVK--KAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD 419
S V+ + + N +ID N L++A E L+ + D
Sbjct: 425 SNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPD 466
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+++I Y AG + + VY +M A G+ PN +TYN L++ G+ +
Sbjct: 318 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 377
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y++MT P+ T++SL+ Y R +D L ++ +M + +Q +V ++ ++
Sbjct: 378 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 437
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+DEA + ++ + P ++ ++ +I +C C GKV EA + M E G P+
Sbjct: 438 QNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKC-GKVDEANLIRKGMEEKGCRPDK 496
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ T LI Y R + + + + E G +PD C ++ + +
Sbjct: 497 YTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 544
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 91/239 (38%), Gaps = 9/239 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM- 153
+D + + D S L+ A D + + G + YN L+ ++
Sbjct: 165 FDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLI 224
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
GR + V + + D SP+ ++ +++ R + L + M E G
Sbjct: 225 GRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDT 284
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+N ++ E+ ++ C P+ TF+S+I+ GK+ +A A++N
Sbjct: 285 VTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 344
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCGC 324
+M+ +G PN LI YGK V ++ L PD D +C C
Sbjct: 345 DMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRC 403
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 123/246 (50%), Gaps = 8/246 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++T+I + T G D N++ EM G++PN++TY ++D + +A+ + + +
Sbjct: 201 PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++M D G+ P+ +TY L+ Y ++ + + EM G++ Y +LL +
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA F+ M + +P+ + +I + +G +SE + N M+E G P+
Sbjct: 321 NGRCREARFFFDSM-IRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHH 379
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ + Y K D+ + N++ + G++PD G L++ + + LG++ + V
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCK-----LGRVDDAVL 434
Query: 346 KSNSKL 351
K N +
Sbjct: 435 KFNQMM 440
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 2/245 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++ LI Y + G + + + EEM A G+KP+ TY +LL+ + R + + +
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN Y L+ Y + + M E G+ ++N + A
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA IF MK + PD F ++I G+V +A FN+M+ G PN+FV
Sbjct: 392 AMIDEAMHIFNKMK-QQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECVE 345
SL+ + + + GI PD F +L N+ T+ + +L++ +E
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510
Query: 346 KSNSK 350
+ ++
Sbjct: 511 RVGTR 515
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ + Y D ++++ +MK G+ P+++ + L+D + + R +
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKF 436
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + G++PN + SL+ E Y EM +G++ V +NT+L
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A + D+ +PD +++++I G++ EA + ML G +P+ +
Sbjct: 497 GQVMKAQRLI-DLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWT 555
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+L+ Y +A R DD + GITP
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITP 586
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 9/226 (3%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +++TLI + G D + M ++G+KP+ TYN LL RA R
Sbjct: 515 RPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYG 574
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM NG++P TY+++L R + +Y M G Q ++ +YN +L +
Sbjct: 575 VFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLS 634
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
DEAF++F+ + S++ Q + TF+ MI G+ +A +F + G P++
Sbjct: 635 KNNCVDEAFKLFQSL-CSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDV 693
Query: 285 F----VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
F + +LI+ G + DD+ A+ + G TP+ R L+
Sbjct: 694 FTYCLIAENLIE-EGYLEEFDDLFSAMEK---SGTTPNSRMLNALV 735
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 124/281 (44%), Gaps = 9/281 (3%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K K + N+ R D F+T++ T G + + M+ +G +P++I+Y L+
Sbjct: 466 KAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLI 525
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
R + M GL P+ TY +LL Y RA +D V+REM G+
Sbjct: 526 GGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGIT 585
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
V Y+T+L EA E++ +M +S Q + W ++ ++ S V EA
Sbjct: 586 PGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK-QWNIWIYNIILNGLSKNNCVDEAFK 644
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL--NV 328
+F + F+ + +I K+ R +D + + G+ P D F CL+ N+
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP-DVFTYCLIAENL 703
Query: 329 MTQTPKEELGKLVECVEKS----NSK-LGYVVKLLLEEQDI 364
+ + EE L +EKS NS+ L +V+ LL DI
Sbjct: 704 IEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI 744
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN + LI Y T G ++ M G+ P+ +N + + +
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM 398
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I+ +M GLSP+ + +L+ A + +D + + +M +G+ ++ ++N+L+
Sbjct: 399 HIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
V ++A E + +M + + +PD F++++ +G+V +A+ + + M G P+
Sbjct: 459 CTVDKWEKAKEFYFEMLN-QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPD 517
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ T+LI + R D+ ++L+ + +G+ PD+
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDE 553
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
I V P++ TY+ L+ R R + + +G N LL+ A+ +
Sbjct: 88 IKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLRE 147
Query: 197 TLSV-YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE--NCQPDSWTFS 253
+ + + M E G V YNTLL + +EA E+ M S+ +C P+ +++
Sbjct: 148 AMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I G+V +A +F EM++ G +PN+ T++I KAQ D ++ +
Sbjct: 208 TVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 314 GITPDDRFCGCLLN 327
G+ PD+ CL++
Sbjct: 268 GVKPDNDTYNCLIH 281
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 10/288 (3%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++WR P+A +++LI + AG + +N+ E+M + P TYNN+++ G A
Sbjct: 38 QEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNW 97
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L A +S + MK + N +
Sbjct: 98 KKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNII 157
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +G EA E+F M+ C PD T++S++ G+V +A+F+ M+
Sbjct: 158 IHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAE 217
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ SL+ Y + + N + + G+ PD LLN ++ + E
Sbjct: 218 GVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKA 277
Query: 339 KLVECVEKSNS----KLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
+ V K NS K+ Y L++ G KEA L + + KD
Sbjct: 278 REVFNKMKKNSCKPNKVSY--NALIDAYGSAGML-KEAVGLLHEMEKD 322
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R K D +++++ Y G + C +++ M A GVKPN++ YN+LL
Sbjct: 178 RERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRG 237
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ I+ + NGL P+ +Y SLL AYGR+ E V+ +MK+ + + YN
Sbjct: 238 MHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYN 297
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRGKVSEAEAMFNEML 276
L+ G EA + +M+ + QPD + S+++ C CR +++ E +
Sbjct: 298 ALIDAYGSAGMLKEAVGLLHEME-KDGIQPDVVSISTLLAACGRCR-QITRIETILEAAR 355
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + N S I+ Y + + + E + PD
Sbjct: 356 SRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK+ + + +K PN +++ LI YG+AG + + EM+ G++P++++ + L
Sbjct: 275 EKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTL 334
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L GR ++ +++TI + G+ N Y S +++Y E L +Y M+E +
Sbjct: 335 LAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV 394
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
+ YN L++ + +G E+ FEDM S+
Sbjct: 395 KPDAVTYNILISGSSKLGKYTESLRFFEDMVDSK 428
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
AR+ ++ A+++ IK Y + G+++ L +Y M+ VKP+ +TYN L+ + +
Sbjct: 354 ARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGK 413
Query: 159 PWQVKTIYKEMTDNGLSPN----WNTYASLLRAYGRA-RYGEDTLSVYR---EMKE---- 206
+ +++M D+ +S W T L + G R G + ++ EM E
Sbjct: 414 YTESLRFFEDMVDSKVSSTKEFLW-TIRWLEESLGPVQRDGSKWIRDWKTASEMIEYLDS 472
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+SV N +L G T+ ++F M +S + S T++ ++ GK
Sbjct: 473 SLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLS-TYAVVLRNLLVVGKWR 531
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLI 291
+ + M ++G P L++ +++
Sbjct: 532 KYIEVLQWMEDSGVHPTLYMFQNVL 556
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++E M G +PN YN L++ G+A ++K M G+ P+ TY+ L+
Sbjct: 915 LFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 974
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++ L +RE+KE G+ V YN ++ +EA +F +MK S PD
Sbjct: 975 MVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDL 1034
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+T++S+I G V EA ++NE+ AG EPN+F +LI+ Y + + +
Sbjct: 1035 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1094
Query: 310 LPELGITPD 318
+ G +P+
Sbjct: 1095 MVTGGFSPN 1103
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ L+ AGNF + M+ G+ PN+ TYN L+ + R R I+
Sbjct: 364 DVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIF 423
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ P TY + YG++ L + +MK KG+ ++ N L A
Sbjct: 424 DNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 483
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +IF +K PDS T++ M+ S G++ EA + +EM+E EP++ V
Sbjct: 484 GRDREAKQIFYGLKDI-GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIV 542
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ SLI KA R D+ + R+ E+ + P
Sbjct: 543 VNSLINTLYKADRVDEAWKMFMRMKEMKLKP 573
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + P A++ I YG +G+ L +E+MK G+ PN++ N L ++ +A R
Sbjct: 427 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 486
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ K I+ + D GL P+ TY +++ Y + ++ + + EM E + V + N+L
Sbjct: 487 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSL 546
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ DEA+++F MK + +P T+++++ GK+ EA +F M++ G
Sbjct: 547 INTLYKADRVDEAWKMFMRMKEMK-LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 605
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN +L C K ++ L ++ ++G PD
Sbjct: 606 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 644
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 123 NFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
N G ++E+ K +GV+P + TYN L+ + A + ++ ++ + G P+ TY
Sbjct: 766 NASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATY 825
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
LL AYG++ ++ +Y+EM + + +N +++ G D+A +++ D+ S
Sbjct: 826 NFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMS 885
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ P + T+ +I S G++ EA+ +F M + G PN + LI +GKA D
Sbjct: 886 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEAD 945
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
R+ + G+ PD + L++ + + + G
Sbjct: 946 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 982
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 4/235 (1%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RA K+ E +Y+ R + P+ ++ LI TA D V+ +MK KP+
Sbjct: 272 RAGKINE-AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDR 330
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TY LLD + V + EM +G P+ T+ L+ A +A + +
Sbjct: 331 VTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDV 390
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M+++G+ ++ YNTL+ V D+A EIF++M+S +P ++T+ I G
Sbjct: 391 MRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESL-GVKPTAYTYIVFIDYYGKSG 449
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A F +M G PN+ + + KA R + + L ++G+ PD
Sbjct: 450 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 504
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D N + T+ K G +M+ G N +YN L+ + +++ + +Y
Sbjct: 154 DTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 213
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M +G P+ TY+SL+ G+ R E + + +EM+ G++ +V + + +
Sbjct: 214 RRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRA 273
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA+EI + M E C PD T++ +I +C+ R K+ A+ +F +M +P+
Sbjct: 274 GKINEAYEILKRM-DDEGCGPDVVTYTVLIDALCTAR-KLDCAKEVFAKMKTGRHKPDRV 331
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ + + D V + + + + G PD
Sbjct: 332 TYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPD 364
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 3/242 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN F+ I++ G AG + + + M G P+++TY L+D + A++
Sbjct: 252 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 311
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M P+ TY +LL + R + + EM++ G V + L
Sbjct: 312 DCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTIL 371
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G EAF + M+ + P+ T++++I ++ +A +F+ M G
Sbjct: 372 VDALCKAGNFGEAFAKLDVMR-DQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLG 430
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+P + I YGK+ + + ++ GI P+ C L + + ++ K
Sbjct: 431 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 490
Query: 340 LV 341
+
Sbjct: 491 QI 492
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R E R D +S L+ G D L+ + E+K G+ P+++ YN +++ +G+
Sbjct: 953 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFH 1012
Query: 158 RPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + ++ EM + G++P+ TY SL+ G A E+ +Y E++ G++ +V +
Sbjct: 1013 RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1072
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
N L+ + G + A+ +++ M + P++ T+ +
Sbjct: 1073 NALIRGYSLSGKPEHAYAVYQTMVTG-GFSPNTGTYEQL 1110
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 131 YEEMKAIGVKPNMI----TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ K++ N++ T N +L+ + + ++ ++ M + + NTY ++ +
Sbjct: 104 FSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFK 163
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
R+M+E G L+ YN L+ + + EA E++ M + +
Sbjct: 164 CLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM-ILDGFR 222
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P T+SS++ R + + EM G +PN++ T I+ G+A + ++
Sbjct: 223 PSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 282
Query: 307 LNRLPELGITPD 318
L R+ + G PD
Sbjct: 283 LKRMDDEGCGPD 294
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 186/434 (42%), Gaps = 50/434 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ L+ LYG G FDG ++ EM+ V P+ TYN L G +V ++++M
Sbjct: 354 YRVLLDLYGRQGRFDGVRELFREMRTT-VPPDTATYNVLFRVFGDGGFFKEVVELFQDML 412
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ + P+ +T +++ A GR ED V + +GM + Y L+ +
Sbjct: 413 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYE 472
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFVLTS 289
EA+ F +M + P T++++ + G EAEA+F+ M A + + +
Sbjct: 473 EAYVAF-NMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDA 531
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKLVECV 344
LI+ Y + + DD V+A + + PD+R +LN + KE+ +L V
Sbjct: 532 LIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMV 591
Query: 345 EKSNSKLGYVVKL--------------LLEEQD--------------IEGDFKKEAT--- 373
S + Y + L LLEE I+G++ ++
Sbjct: 592 -TVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYDDDSNWQM 650
Query: 374 ---ELFNSISK--DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
L NS + D + N L+D+ A ++L+ L ++ ++ + W
Sbjct: 651 VEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPELFRDTKLVW 710
Query: 429 SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS--DKGL--ASV 484
S + +S+G +L A+ +W+N L L+ E+ P L + G+ + S +GL A V
Sbjct: 711 SADVHRMSVGGSLVAVSVWLNKLYDRLKGDEDLPQLASVVVLRGQMEKSTVTRGLPIAKV 770
Query: 485 FESHLKE-LNAPFH 497
S L + L++ FH
Sbjct: 771 VYSFLNDTLSSSFH 784
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M GV P+ +Y +++D A +V ++ EM+ G +P+ + Y L+ A+
Sbjct: 272 MLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGA 331
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ ++V R+M+ G + Y LL + G D E+F +M+++ PD+ T++
Sbjct: 332 TAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTT--VPPDTATYN 389
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ + G E +F +ML + EP++ +++ G+ +D L+ +
Sbjct: 390 VLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTE 449
Query: 314 GITP 317
G+ P
Sbjct: 450 GMVP 453
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 9/227 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW----QVKTI 165
++++LI Y + + ++MKA GV P TYN +L RA P + +
Sbjct: 171 SYTSLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACARATDPPVPFDMLLGL 230
Query: 166 YKEMTDN---GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM + + P+ TY +LL A + + + R M E G+ Y ++
Sbjct: 231 FAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDA 290
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
A G E+F +M ++ + PD + ++ + G +EA A+ +M G P
Sbjct: 291 FAGAGNLSRVAELFAEMSATGHT-PDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPP 349
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
L+ YG+ R D VR L R + PD L V
Sbjct: 350 TAATYRVLLDLYGRQGRFDG-VRELFREMRTTVPPDTATYNVLFRVF 395
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 11/253 (4%)
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE----I 235
+Y SL+ AY R E+ + +MK G+ + YNT+LA CA F+ +
Sbjct: 171 SYTSLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACARATDPPVPFDMLLGL 230
Query: 236 FEDMKS--SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
F +M+ S + +PD T+++++ + R ++E + MLEAG P+ ++
Sbjct: 231 FAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDA 290
Query: 294 YGKAQRTDDVVRALNRLPELGITPD-DRFCGCL-LNVMTQTPKEELGKLVECVEKSNSKL 351
+ A V + G TPD + G + + + E + L +
Sbjct: 291 FAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPT 350
Query: 352 GYVVKLLLEEQDIEGDFKKEATELFNSISKDV--KKAYCNCLIDLCVNLNLLENACKLLE 409
++LL+ +G F ELF + V A N L + + + +L +
Sbjct: 351 AATYRVLLDLYGRQGRFDG-VRELFREMRTTVPPDTATYNVLFRVFGDGGFFKEVVELFQ 409
Query: 410 LGLTLEVYTDIQS 422
L EV DI +
Sbjct: 410 DMLHSEVEPDIDT 422
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 76/200 (38%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E + N + D ++F LI+ Y D + Y EM+ P+ + +L+
Sbjct: 510 EAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLN 569
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
A + K ++E+ P+ Y +L Y R D + EMK
Sbjct: 570 AYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASS 629
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ + +++ D + E D + E C F++++ + G+ A +
Sbjct: 630 THQVIASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARV 689
Query: 272 FNEMLEAGFEPNLFVLTSLI 291
++ L+ G P LF T L+
Sbjct: 690 LDQALKYGLFPELFRDTKLV 709
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D Y EM G+ PN++TY++++ + +A+ + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ PN TY S++ Y + ++ + ++M G++ V YN+L+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F+ M + +P+ T+ +++ + +G + E + + M+ G PN +V
Sbjct: 318 GRCTEARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y K + D + +++ + G+ PD G ++ ++ ++ + E
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 2/193 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
EK +D R + D +STLI Y AG D + M ++G+KP+ +TYN L++
Sbjct: 499 EKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R +++EM +G+SP+ TY +L+ + R +Y + E G QL
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G+ EA+ +
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDL 676
Query: 272 FNEMLEAGFEPNL 284
F + G P++
Sbjct: 677 FAALSANGLVPDV 689
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 131 YEEMKAIG---VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
Y M G V PN+ TY L+ + A R + G + + LL+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 188 YGRARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENC 245
+ D + V R M + G +V YN LL D + EA E+ + M +C
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD +++++I G + +A ++EML+ G PN+ +S+I KAQ D +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 306 ALNRLPELGITPDDRFCGCLLN--VMTQTPKEELGKL 340
L + + G+ P+ R +++ + PKE +G L
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
++ R + D + T+I + +G + + +E+M + P I YN+L+ ++
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + K + EM D G+ + + S++ ++ + ++ ++ M G++ + Y
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+TL+ G DEA ++ M S +PD T++++I ++ +A +F EM
Sbjct: 518 STLIDGYCLAGKMDEATKLLASMVSV-GMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRT 300
+G P++ ++Q + +RT
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRT 600
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM G+ + I +N+++D+ + R + + ++ M G+ P+ TY++L+ Y A
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ + M GM+ YNTL+ + ++A +F +M+SS PD T+
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS-GVSPDIITY 587
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ ++ + + A+ ++ + E+G + L ++ K TD+ +R L
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D Y EM G+ PN++TY++++ + +A+ + +
Sbjct: 198 DVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVL 257
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ PN TY S++ Y + ++ + ++M G++ V YN+L+
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F+ M + +P+ T+ +++ + +G + E + + M+ G PN +V
Sbjct: 318 GRCTEARKMFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y K + D + +++ + G+ PD G ++ ++ ++ + E
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 2/193 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
EK +D R + D +STLI Y AG D + M ++G+KP+ +TYN L++
Sbjct: 499 EKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R +++EM +G+SP+ TY +L+ + R +Y + E G QL
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G+ EA+ +
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDL 676
Query: 272 FNEMLEAGFEPNL 284
F + G P++
Sbjct: 677 FAALSANGLVPDV 689
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 131 YEEMKAIG---VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
Y M G V PN+ TY L+ + A R + G + + +L+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKG 135
Query: 188 YGRARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENC 245
+ D + V R M + G +V YN LL D + EA E+ + M +C
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDC 195
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD +++++I G + +A ++EML+ G PN+ +S+I KAQ D +
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 306 ALNRLPELGITPDDRFCGCLLN--VMTQTPKEELGKL 340
L + + G+ P+ R +++ + PKE +G L
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
++ R + D + T+I + +G + + +E+M + P I YN+L+ ++
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + K + EM D G+ + + S++ ++ + ++ ++ M G++ + Y
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+TL+ G DEA ++ M S +PD T++++I ++ +A +F EM
Sbjct: 518 STLIDGYCLAGKMDEATKLLASMVSV-GMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRT 300
+G P++ ++Q + +RT
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRT 600
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM G+ + I +N+++D+ + R + + ++ M G+ P+ TY++L+ Y A
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ + M GM+ YNTL+ + ++A +F +M+SS PD T+
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS-GVSPDIITY 587
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ ++ + + A+ ++ + E+G + L ++ K TD+ +R L
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ L+ AGNF + + M+ G+ PN+ TYN L+ + R R ++
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ P TY + YG++ L + +MK KG+ ++ N L A
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +IF +K PDS T++ M+ S G++ EA + +EM+E G EP++ V
Sbjct: 482 GRDREAKQIFYGLKDI-GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ SLI KA R D+ + R+ E+ + P
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + P A++ I YG +G+ L +E+MK G+ PN++ N L ++ +A R
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ K I+ + D GL P+ TY +++ Y + ++ + + EM E G + V + N+L
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ DEA+++F MK + +P T+++++ GK+ EA +F M++ G
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMK-LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN +L C K ++ L ++ ++G PD
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++E M G +PN YN L++ G+A ++K M G+ P+ TY+ L+
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++ L ++E+KE G+ V YN ++ +EA +F +MK+S PD
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+T++S+I G V EA ++NE+ AG EPN+F +LI+ Y + + +
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Query: 310 LPELGITPD 318
+ G +P+
Sbjct: 1093 MVTGGFSPN 1101
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 123 NFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
N G ++E+ K +GV+P + TYN L+ + A + ++ ++ G P+ TY
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATY 823
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
LL AYG++ ++ +Y+EM + + +N +++ G D+A +++ D+ S
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ P + T+ +I S G++ EA+ +F ML+ G PN + LI +GKA D
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
R+ + G+ PD + L++ + + + G
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RA K+ E +Y+ R + P+ ++ LI TA D V+E+MK KP+
Sbjct: 270 RAGKINE-AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA-RYGE--DTLSV 200
+TY LLD + VK + EM +G P+ T+ L+ A +A +GE DTL V
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
M+++G+ ++ YNTL+ V D+A E+F +M+S +P ++T+ I
Sbjct: 389 ---MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL-GVKPTAYTYIVFIDYYG 444
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G A F +M G PN+ + + KA R + + L ++G+ PD
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 90 LKEKSYDTRARNE-KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
LK+ Y R E + ++ +++ LI L + + VY M G +P++ TY++
Sbjct: 169 LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L+ +G+ + V + KEM GL PN T+ +R GRA + + + M ++G
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
V Y L+ D A E+FE MK+ + +PD T+ +++ S +
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH-KPDRVTYITLLDRFSDNRDLDSV 347
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQC------YGKAQRTDDVVRALNRLPELGITPDDRFC 322
+ ++EM + G P++ T L+ +G+A T DV+R LP L T + C
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH-TYNTLIC 406
Query: 323 GCL 325
G L
Sbjct: 407 GLL 409
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 4/233 (1%)
Query: 88 SKLKEKSYDTRARNEKW-RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
KL+E +Y ++ + D N + T+ K G +M+ G N +Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+ + +++ + +Y+ M G P+ TY+SL+ G+ R + + + +EM+
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKV 265
G++ +V + + + G +EA+EI + M E C PD T++ +I +C+ R K+
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRM-DDEGCGPDVVTYTVLIDALCTAR-KL 309
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A+ +F +M +P+ +L+ + + D V + + + + G PD
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD 362
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R E R D +S L+ G D L+ ++E+K G+ P+++ YN +++ +G++
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 158 RPWQVKTIYKEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + ++ EM T G++P+ TY SL+ G A E+ +Y E++ G++ +V +
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
N L+ + G + A+ +++ M + P++ T+ +
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTG-GFSPNTGTYEQL 1108
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T N +L+ + + ++ ++ M + + NTY ++ ++ + R+M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+E G L+ YN L+ + + EA E++ M E +P T+SS++ R
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM-ILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + EM G +PN++ T I+ G+A + ++ L R+ + G PD
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 118/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ + N++TYN+++ G+
Sbjct: 180 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHE 239
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 240 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 299
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++KS +N D + I I + G++ EA +F + ++AG
Sbjct: 300 VAYERAGLVAHAKRLLHELKSPDNIPRD-----TAIHILAGAGRIEEATYVFRQAIDAGE 354
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 355 VKDIMVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLN 401
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 11 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 70
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 71 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN 130
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 131 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 189
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 190 YNTLLRVYGDAE 201
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 46 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 105
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 106 SEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 165
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + T
Sbjct: 166 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQ-RKNIVQNVVT 224
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 225 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 284
Query: 312 ELGITPD 318
G+ D
Sbjct: 285 SSGVEID 291
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 62 DYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 120
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 164
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + AG + V+ + G +++ + ++ + K+ V ++ +M
Sbjct: 328 TAIHILAGAGRIEEATYVFRQAIDAGEVKDIMVFERMIHLFSKYKKYANVVEVFDKMRGL 387
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
G P+ N A +L AYG+ + VY EM+E G S ++ +L++
Sbjct: 388 GYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCVFSDEVHFQMLSL 437
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 10/288 (3%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++WR P+A +++LI + AG + +N+ E+M + P TYNN+++ G A
Sbjct: 38 QEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNW 97
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L A +S + MK + N +
Sbjct: 98 KKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNII 157
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +G EA E+F M+ C PD T++S++ G+V +A+F+ M+
Sbjct: 158 IHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAE 217
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ SL+ Y + + N + + G+ PD LLN ++ + E
Sbjct: 218 GVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKA 277
Query: 339 KLVECVEKSNS----KLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
+ V K NS K+ Y L++ G KEA L + + KD
Sbjct: 278 REVFNKMKKNSCKPNKVSY--NALIDAYGSAGML-KEAVGLLHEMEKD 322
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 22/261 (8%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK+ + + +K PN +++ LI YG+AG + + EM+ G++P++++ + L
Sbjct: 275 EKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTL 334
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L GR ++ +++TI + G+ N Y S +++Y E L +Y M+E +
Sbjct: 335 LAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV 394
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ YN L++ + +G E+ FEDM S+ GK+SEAE
Sbjct: 395 KPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTK-------------EGKLSEAE 441
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+ F+ M ++G P++ T+LIQ Y G +R D+ + + GI PD C L+
Sbjct: 442 STFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFK---EMEVNGIPPDAIICSSLM 498
Query: 327 NVMTQTPK-EELGKLVECVEK 346
+ + E + +L+E ++K
Sbjct: 499 EAFNKGGEPERVLQLMEFMKK 519
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R K D +++++ Y G + C +++ M A GVKPN++ YN+LL
Sbjct: 178 RERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRG 237
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ I+ + NGL P+ +Y SLL AYGR+ E V+ +MK+ + + YN
Sbjct: 238 MHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYN 297
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRGKVSEAEAMFNEML 276
L+ G EA + +M+ + QPD + S+++ C CR +++ E +
Sbjct: 298 ALIDAYGSAGMLKEAVGLLHEME-KDGIQPDVVSISTLLAACGRCR-QITRIETILEAAR 355
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + N S I+ Y + + + E + PD
Sbjct: 356 SRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI+ Y G + ++++EM+ G+ P+ I ++L++ + P +V +
Sbjct: 455 DVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLM 514
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + N +Y ++ + R + + + +SV N +L
Sbjct: 515 EFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKC 574
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T+ ++F M +S + S T++ ++ GK + + M ++G P L++
Sbjct: 575 GKTENMMKLFYKMVTSCSTVGLS-TYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYM 633
Query: 287 LTSLI 291
+++
Sbjct: 634 FQNVL 638
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 3/214 (1%)
Query: 107 DPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ +F++ I G ++ + + EM G+ PN+ITYN+ ++ GR+ R +
Sbjct: 424 DPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMG 483
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM GLSPN TY S++ A + E + + M +G+ V YN+ + C
Sbjct: 484 LFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACG 543
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ A ++ + M + +PD +++S +T C+ G+ EA + +M G PN
Sbjct: 544 KGEQWELALQLLKGMPT-RGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNT 602
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ I GK ++ D VR L + G TP+
Sbjct: 603 VSYGAAIHACGKGEQWDVAVRILKEMQTHGATPN 636
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S++I G + +++ E+M+ GV PN+I+YN+ +D + R + +
Sbjct: 286 DVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLL 345
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EMT GL P +Y S A + L + +EM +G+ + YN+ L CA
Sbjct: 346 REMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKG 405
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE-AEAMFNEMLEAGFEPNLF 285
G ++A ++ M S+ PD +F+S I C RG+ E A + EM AG PN+
Sbjct: 406 GQWEKAVKLLRGM-STVGSDPDIISFNSAIDACG-RGQQWETAVELLREMPTAGLTPNVI 463
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S I+ G++ R + + +P G++P+
Sbjct: 464 TYNSAIEACGRSARWQEAMGLFREMPTRGLSPN 496
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 5/216 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ I+ G + + + ++ EM G+ PN++TYN+++D + ++ W++
Sbjct: 458 LTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQ-WELA 516
Query: 164 T-IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ M G++P+ +Y S + A G+ E L + + M +G + + YN+ +
Sbjct: 517 VQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTA 576
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
CA G EA + +DM ++ P++ ++ + I C + A + EM G P
Sbjct: 577 CAKSGRWREALGLLKDM-ATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATP 635
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
NL ++ I K R + V L L G+TPD
Sbjct: 636 NLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPD 671
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 130/323 (40%), Gaps = 44/323 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI--GVKPNMITYNNLLDTMGRAKRPWQVKT 164
D +++ I G + +++ +M A G+ P+++TYN+ + R +
Sbjct: 144 DVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMD 203
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ ++M G+ PN TY S + A + R E+ + + E+ E+G S YN ++ CA
Sbjct: 204 LLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACA 263
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA ++ M +++ D ++SS+I C + EA + +M G PN+
Sbjct: 264 KGGRWLEAMDLLGQMLTND-IPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNV 322
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP-----DDRFCGCLLNVMTQTPKEELGK 339
S I K R + + L + +G+ P + C +N G+
Sbjct: 323 ISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVN----------GR 372
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLN 399
VE +E LL+E +G N+IS N +D C
Sbjct: 373 WVEALE------------LLKEMPAQGIAP-------NTISY-------NSALDACAKGG 406
Query: 400 LLENACKLLELGLTLEVYTDIQS 422
E A KLL T+ DI S
Sbjct: 407 QWEKAVKLLRGMSTVGSDPDIIS 429
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
LL+ GR R E +G S + +Y + A R + + REM +G
Sbjct: 83 LLEAKGRDWR--TALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEG 140
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS-SENCQPDSWTFSSMITICSCRGKVSE 267
+ V YN+ +A C+ G EA ++ M + +E PD T++S I CS G+ E
Sbjct: 141 VTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKE 200
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
A + +M+ G PNL S I K +R ++ + L + E G P R
Sbjct: 201 AMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTR 253
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 96 DTRARNEKWRI---------------DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
D A+ E+W + D ++++ I+ G ++ L + + M G K
Sbjct: 505 DACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPK 564
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++I+YN+ + ++ R + + K+M GL+PN +Y + + A G+ + + +
Sbjct: 565 PDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRI 624
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+EM+ G ++ Y+ + CA G EA ++ D++ + PD+ T+ ++I+
Sbjct: 625 LKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLR-RQGLTPDAQTYLTVIS 680
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L +E K G + +YN + ++ + +EM G++P+ TY S + A
Sbjct: 95 LAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAA 154
Query: 188 YGRARYGEDTLSVYREM--KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
+ ++ + + +M +G+ V YN+ +A C++ G EA ++ E M ++
Sbjct: 155 CSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQM-VAQGV 213
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
P+ T++S I C+ + EA + E++E GF P+ +I K R
Sbjct: 214 PPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGR 267
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ I G +D + + +EM+ G PN+ITY+ +D + R +
Sbjct: 598 LTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAV 657
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ ++ GL+P+ TY +++ A+ R
Sbjct: 658 DLLTDLRRQGLTPDAQTYLTVISAFQR 684
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 7/260 (2%)
Query: 86 RASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A +L E ++ R E R D + +I G AG D + ++EEM+ + P+++
Sbjct: 308 KAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVV 367
Query: 145 TYNNLLDTMGRAK-RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
TYN ++ + +K R ++ + ++ M +G+SP+ TY+ L+ + + E + + E
Sbjct: 368 TYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEE 427
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW-TFSSMITICSCR 262
M EKG Y +L+ D A E+F+++K ENC S ++ MI
Sbjct: 428 MDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELK--ENCGSSSARVYAVMIKHLGKA 485
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
G++ +A +F+EM G PN++ +L+ +A D+ + + R+ + G PD
Sbjct: 486 GRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSY 545
Query: 323 GCLLNVMTQT--PKEELGKL 340
+LN + +T P +G L
Sbjct: 546 NIILNALAKTGGPDRAMGML 565
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN + P S +I++ G A + ++ ++KA +P YN+++ +
Sbjct: 146 VRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGE 205
Query: 159 PWQVKTIYKEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V +Y EM++ G P+ TY++L+ A+ + + + + EMK+ GMQ + +Y
Sbjct: 206 YEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYT 265
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+A+ + A +FE+M+ + C+PD +T++ +I G++ EA F+EM
Sbjct: 266 MLMALLFKLDNVHGALGLFEEMR-HQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRR 324
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P+ ++ ++I GKA R DD ++ + L P
Sbjct: 325 EGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIP 364
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 5/278 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + G D + + EMK G++P Y L+ + + ++
Sbjct: 225 DTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLF 284
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM P+ TY L+R G+A ++ + + EM+ +G + L N ++
Sbjct: 285 EEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKA 344
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++FE+M++ C P T++++I + + +VSE + F M +G P+ F
Sbjct: 345 GRLDDAIKLFEEMETLR-CIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPF 403
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK--LVEC 343
+ LI + K RT+ + L + E G P L++ + + + +L E
Sbjct: 404 TYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQEL 463
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
E S V ++++ G +A +LF+ +++
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRL-DDAVDLFDEMNR 500
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A +D +++E+K + Y ++ +G+A R ++
Sbjct: 437 PAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFD 496
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G +PN Y +L+ RA ++ L+ R M++ G + YN +L A G
Sbjct: 497 EMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTG 556
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A + +MK S +PD+ ++++++ S G EA + EM GF+ +L
Sbjct: 557 GPDRAMGMLCNMKQSA-IKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITY 615
Query: 288 TSLIQCYGKAQR 299
+S+++ GK +
Sbjct: 616 SSILEAIGKVDQ 627
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P +S LI + + + + EEM G P Y +L+D +G+AKR +++
Sbjct: 402 PFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQ 461
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
E+ +N S + YA +++ G+A +D + ++ EM G +V YN L++ A G
Sbjct: 462 ELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAG 521
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA M+ C PD +++ ++ + G A M M ++ +P+
Sbjct: 522 MLDEALTTMRRMQ-DHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSY 580
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ A ++ + + + +G D
Sbjct: 581 NTVLGALSHAGMFEEAAKLMKEMNAIGFDYD 611
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 69 KTGSSPKSYIWVNPKS--PRASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFD 125
+ G +P Y + S RA L E R + I D N+++ ++ G D
Sbjct: 500 RLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPD 559
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + MK +KP+ ++YN +L + A + + KEM G + TY+S+L
Sbjct: 560 RAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSIL 619
Query: 186 RAYGRA 191
A G+
Sbjct: 620 EAIGKV 625
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 191/433 (44%), Gaps = 29/433 (6%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N R D ++ L+ YG +D V+EEMK V PN++TY+ L+D +
Sbjct: 429 NAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYK 488
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +++E GL + Y++L+ A + E ++++ EM ++G++ +V YN+++
Sbjct: 489 EAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSII 548
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G + A + +D + Q +S SS++ + + ++ E N ++E
Sbjct: 549 DA---FGRSASAQCVVDDSGETTALQVES--LSSIVVQEAIESQAADKED--NRIIEI-- 599
Query: 281 EPNLFVLTSLIQCYGK---AQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EE 336
L + C K Q ++ ++ EL I P+ +LN ++ E+
Sbjct: 600 ---FGKLAAEKACEAKNSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFED 656
Query: 337 LGKLVECVEK-SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI---SKDVKKAYCNCLI 392
L+E + N G LL+ ++ + +A LF+ + A+ N L
Sbjct: 657 ASMLLEELRLFDNQVYGVAHGLLMGYRE---NVWLQAQSLFDEVKLMDSSTASAFYNALT 713
Query: 393 DLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
D+ + A ++ G +V+ +I S S L L +S GAA +H W+ ++
Sbjct: 714 DMLWHFGQKRGAQLVVLEGKRRQVWENIWSDS----CLDLHLMSSGAARAMVHAWLLNIR 769
Query: 453 KALESGEEFPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTE 510
+ G E P LL I TG GKH D L E+ L + APF + +G F++T
Sbjct: 770 SIVFEGHELPKLLSILTGWGKHSKVVGDSALRRAVEALLIGMGAPFRLAKCNLGRFISTG 829
Query: 511 AAAKSWLESRSSL 523
+ +WL+ +L
Sbjct: 830 SVVAAWLKESGTL 842
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 3/201 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN +ST+I Y G D LN++ EMK +GV + ++YN LL + R Q
Sbjct: 362 ILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQAL 421
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ KEM + G+ + TY +LL YG+ ++ V+ EMK + ++ Y+TL+ +
Sbjct: 422 DVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVY 481
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G EA E+F + K + + D +S++I G V + + +EM + G PN
Sbjct: 482 SKGGLYKEAMEVFREFKQA-GLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPN 540
Query: 284 LFVLTSLIQCYGKAQRTDDVV 304
+ S+I +G++ VV
Sbjct: 541 VVTYNSIIDAFGRSASAQCVV 561
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+ + G ++ ++ M G+ ++ TYN LLD + + + I
Sbjct: 295 DRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIM 354
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + PN TY++++ Y + +D L+++ EMK G+ L YNTLL++ A +
Sbjct: 355 SEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKL 414
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A ++ ++M+++ + D T+++++ + + E +F EM PNL
Sbjct: 415 GRFEQALDVCKEMENA-GIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLT 473
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++LI Y K + + + G+ D L++ +
Sbjct: 474 YSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDAL 516
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 108 PN--AFSTLIKLYGTAG-NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
PN ++ +I G G F + +++ M + GV+P+ IT+N+LL R +
Sbjct: 258 PNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARR 317
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ M D G+ + TY +LL A + + + EM K + +V Y+T++ A
Sbjct: 318 LFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYA 377
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
VG D+A +F +MK D ++++++++ + G+ +A + EM AG ++
Sbjct: 378 KVGRLDDALNMFNEMKFL-GVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDV 436
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+L+ YGK R D+V R + ++P+ L++V ++
Sbjct: 437 VTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSK 483
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 100/214 (46%), Gaps = 4/214 (1%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYE--EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ ++ L++ G G+ + +E + G + ++ T+GR + K +
Sbjct: 153 PDDYTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAV 212
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ G +++L+ AYGR+ Y + + V+ MK G+ ++ YN ++ C
Sbjct: 213 FDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGK 272
Query: 226 VGYT-DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + EIF+ M S+ QPD TF+S++ +CS G A +F+ M++ G + ++
Sbjct: 273 GGVEFKKVVEIFDGMLSN-GVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDI 331
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F +L+ K + D ++ +P I P+
Sbjct: 332 FTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPN 365
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 36/261 (13%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K R+ P+ AF +I+ + AG+ LN+ + M+ G P ++TYN L+ + + +
Sbjct: 541 QKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQV 600
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M+ G++PN +TY ++R Y + ++KE G++L V +Y TL
Sbjct: 601 ERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETL 660
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE--------NCQPDSW--------------------- 250
L C G A + +M + + N D W
Sbjct: 661 LRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGV 720
Query: 251 -----TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
T++S I C G + A+ + EM + G +PNL T+LI+ + KA D ++
Sbjct: 721 PPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALK 780
Query: 306 ALNRLPELGITPDDRFCGCLL 326
+ + G+ PD+ CL+
Sbjct: 781 SFEEMKLAGLKPDEAAYHCLV 801
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+A+ +++ Y + CL V+E +K P++I+Y L++ + + + I KE
Sbjct: 410 DAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKE 469
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY+ L+ + + S++ EM + G+Q +YN L+ +G
Sbjct: 470 MESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGN 529
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A I E M+ E QP + F +I + G + A + + M +G P +
Sbjct: 530 MDRAIRILEKMQ-KERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYN 588
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI K + + V LN++ GITP++
Sbjct: 589 ALIHGLIKKNQVERAVSVLNKMSIAGITPNE 619
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y T+ + ++D + TL++ +G L V EM + N YN L+D
Sbjct: 641 YFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWA 700
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R W+ + K+M ++G+ PN +TY S + A +A + V EM + G++ ++
Sbjct: 701 RRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLK 760
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
Y TL+ A D A + FE+MK + +PD + ++T R V E
Sbjct: 761 TYTTLIKGWAKASLPDRALKSFEEMKLA-GLKPDEAAYHCLVTSLLSRATVMEG 813
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 116/276 (42%), Gaps = 9/276 (3%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
KP+ + ++ + + ++ M G+ PN + SL+ AY AR LS
Sbjct: 266 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLS 325
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
EMK +G++L++ Y+ ++A A + A +F++ K+ + +S++I
Sbjct: 326 CVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLG-DLNGIIYSNIIHAH 384
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
G + AE + EM E G + + S++ Y Q + RL E TP
Sbjct: 385 CQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSI 444
Query: 320 RFCGCLLNVMTQTPKE----ELGKLVEC--VEKSNSKLGYVVKLLLEEQDIEGDFKKEAT 373
GCL+N+ + K + K +E ++ +N ++ + D F
Sbjct: 445 ISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEE 504
Query: 374 ELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
L + + D +A N LI+ + ++ A ++LE
Sbjct: 505 MLKSGLQPD--RAIYNLLIEAFCKMGNMDRAIRILE 538
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 10/288 (3%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++WR P+A +++LI + AG + +N+ E+M + P TYNN+++ G A
Sbjct: 38 QEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNW 97
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L A +S + MK + N +
Sbjct: 98 KKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNII 157
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +G EA E+F M+ C PD T++S++ G+V +A+F+ M+
Sbjct: 158 IHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAE 217
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ SL+ Y + + N + + G+ PD LLN ++ + E
Sbjct: 218 GVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKA 277
Query: 339 KLVECVEKSNS----KLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
+ V K NS K+ Y L++ G KEA L + + KD
Sbjct: 278 REVFNKMKKNSCKPNKVSY--NALIDAYGSAGML-KEAVGLLHEMEKD 322
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 141/317 (44%), Gaps = 80/317 (25%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN A+++L+ Y + G L ++ +K G++P++++Y +LL+ GR+ +P + +
Sbjct: 219 VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAR 278
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ +M N PN +Y +L+ AYG A ++ + + EM++ G+Q V +TLLA C
Sbjct: 279 EVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAAC 338
Query: 224 A-----------------------------------DVGYTDEAFEIFEDMKSSENCQPD 248
G ++A E++ M+ S N +PD
Sbjct: 339 GRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRES-NVKPD 397
Query: 249 SWT-----------------------------------FSSMITICSCRGKVSEAEAMFN 273
+ T +SS+I +GK+SEAE+ F+
Sbjct: 398 AVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFS 457
Query: 274 EMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
M ++G P++ T+LIQ Y G +R D+ + + GI PD C L+
Sbjct: 458 SMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFK---EMEVNGIPPDAIICSSLMEAFN 514
Query: 331 QTPK-EELGKLVECVEK 346
+ + E + +L+E ++K
Sbjct: 515 KGGEPERVLQLMEFMKK 531
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R K D +++++ Y G + C +++ M A GVKPN++ YN+LL
Sbjct: 178 RERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRG 237
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ I+ + NGL P+ +Y SLL AYGR+ E V+ +MK+ + + YN
Sbjct: 238 MHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYN 297
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRGKVSEAEAMFNEML 276
L+ G EA + +M+ + QPD + S+++ C CR +++ E +
Sbjct: 298 ALIDAYGSAGMLKEAVGLLHEME-KDGIQPDVVSISTLLAACGRCR-QITRIETILEAAR 355
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + N S I+ Y + + + E + PD
Sbjct: 356 SRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPD 397
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK+ + + +K PN +++ LI YG+AG + + EM+ G++P++++ + L
Sbjct: 275 EKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTL 334
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L GR ++ +++TI + G+ N Y S +++Y E L +Y M+E +
Sbjct: 335 LAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNV 394
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE-------------------------- 243
+ YN L++ + +G E+ FEDM S+
Sbjct: 395 KPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAES 454
Query: 244 --------NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
C PD T++++I + G A +F EM G P+ + +SL++ +
Sbjct: 455 TFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFN 514
Query: 296 KAQRTDDVVRAL 307
K + V++ +
Sbjct: 515 KGGEPERVLQLM 526
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI+ Y G + ++++EM+ G+ P+ I ++L++ + P +V +
Sbjct: 467 DVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLM 526
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + N +Y ++ + R + + + +SV N +L
Sbjct: 527 EFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKC 586
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T+ ++F M +S + S T++ ++ GK + + M ++G P L++
Sbjct: 587 GKTENMMKLFYKMVTSCSTVGLS-TYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYM 645
Query: 287 LTSLI 291
+++
Sbjct: 646 FQNVL 650
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Query: 99 ARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
A ++ W PN ++ST+I + T G D N++ EM G+ P+++TY ++D + +A
Sbjct: 192 ADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKA 251
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + + ++++M DNG+ PN +TY L+ Y ++ + + EM G + + Y
Sbjct: 252 QLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTY 311
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+LL G EA F+ M + +P T+ M+ + +G +SE + N M+
Sbjct: 312 GSLLNYLCKNGRCREARFFFDSM-IGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMV 370
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
G PN + Y K D + N++ + G++PD G L++ + + +
Sbjct: 371 ANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGR 428
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 105/231 (45%), Gaps = 3/231 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN F+ Y G D ++++ +M+ G+ P+ ++Y L+D + + R +
Sbjct: 374 ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAE 433
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +M + G++P+ ++SL+ E ++ EM G+ ++ +NT+L
Sbjct: 434 VKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNL 493
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G E + + ++ +PD +++++I G + EA + M+ G +P+
Sbjct: 494 CKEGRVMEGQRLVDSIECM-GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
F +L+ Y KA R D ++ GITP +L+ + QT +
Sbjct: 553 SFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P++FS TL+ Y AG D + + +M + G+ P ++TYN +L + + KR + K
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+Y M ++G + TY +L ++ ++ + +++ + KG+QL++ +N ++
Sbjct: 609 ELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGAL 668
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++A ++F + ++ Q + T+ ++ G + E +++F+ M + G PN
Sbjct: 669 LKGGRKEDAMDLFAAIPANGLVQ-NVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPN 727
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+L +L++ + D+ RA L +L
Sbjct: 728 SQMLNALVR---RLLHRGDISRAGAYLSKL 754
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 7/241 (2%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ + ++ +GV+P++I+YN L+D A + + + M GL P+ +Y +LL Y
Sbjct: 505 LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYC 564
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+A + S +R+M G+ V YNT+L EA E++ +M +S + D
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GTKWDI 623
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+T++ ++ V EA MF + G + N+ +I K R +D +
Sbjct: 624 YTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAA 683
Query: 310 LPELGITPD-DRFCGCLLNVMTQTPKEELGKLVECVEKSNSK-----LGYVVKLLLEEQD 363
+P G+ + + + N++ + EE L +EK+ + L +V+ LL D
Sbjct: 684 IPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 743
Query: 364 I 364
I
Sbjct: 744 I 744
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 6/209 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +++TLI + AG D + E M ++G+KP+ +YN LL +A R +
Sbjct: 515 RPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYS 574
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++M NG++P TY ++L + + + +Y M G + + YN +L
Sbjct: 575 HFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLC 634
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
DEA ++F+++ S+ Q + TF+ MI G+ +A +F + G N+
Sbjct: 635 KSNCVDEAIKMFQNL-CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNV 693
Query: 285 ----FVLTSLIQCYGKAQRTDDVVRALNR 309
V+ +LI+ G + D + A+ +
Sbjct: 694 VTYRLVVENLIE-EGSLEEFDSLFSAMEK 721
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 46/257 (17%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVY-EEMKAIGVKPNMITYNNLLD----------- 151
WR+D + L+ ++V + M +G P+ ++YN LL
Sbjct: 125 WRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEA 184
Query: 152 ------------------------------TMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
T G+ +P+ ++ EM D G+ P+ TY
Sbjct: 185 LELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYN---LFLEMMDRGIPPDVVTY 241
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+++ +A+ + +V+++M + G++ ++ YN L+ +G E + E+M S
Sbjct: 242 TTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM-S 300
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ +P+ T+ S++ G+ EA F+ M+ G +P++ ++ Y
Sbjct: 301 AGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALS 360
Query: 302 DVVRALNRLPELGITPD 318
++ LN + GI+P+
Sbjct: 361 EMHDLLNLMVANGISPN 377
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E + ++ +K+RI A S+ L A D +++ EM G+ P+++TYN +L
Sbjct: 777 EYQHHAKSLPKKYRILNEANSS--ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 834
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + R + K +Y M ++ N TY +L ++ ++ +++ + KG+QL
Sbjct: 835 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 894
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ +N ++ G ++A ++F + ++ PD T+ + G + E + +
Sbjct: 895 NIITFNIMIGALLKGGRKEDAMDLFAAIPAN-GLVPDVVTYRLVAENLIEEGSLEEFDGL 953
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
F M ++G + +L +L++ + + D+ RA L +L
Sbjct: 954 FLTMEKSGTPLDSRLLNALVR---RLLQRGDISRAGAYLSKL 992
>gi|222626074|gb|EEE60206.1| hypothetical protein OsJ_13175 [Oryza sativa Japonica Group]
Length = 789
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 186/434 (42%), Gaps = 50/434 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ L+ LYG G FDG ++ EM+ V P+ TYN L G +V ++++M
Sbjct: 160 YRVLLDLYGRQGRFDGVRELFREMRTT-VPPDTATYNVLFRVFGDGGFFKEVVELFQDML 218
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ + P+ +T +++ A GR ED V + +GM + Y L+ +
Sbjct: 219 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYE 278
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFVLTS 289
EA+ F +M + P T++++ + G EAEA+F+ M A + + +
Sbjct: 279 EAYVAF-NMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDA 337
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKLVECV 344
LI+ Y + + DD V+A + + PD+R +LN + KE+ +L V
Sbjct: 338 LIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMV 397
Query: 345 EKSNSKLGYVVKL--------------LLEEQD--------------IEGDFKKEAT--- 373
S + Y + L LLEE I+G++ ++
Sbjct: 398 TVP-SIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYDDDSNWQM 456
Query: 374 ---ELFNSISK--DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
L NS + D + N L+D+ A ++L+ L ++ ++ + W
Sbjct: 457 VEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPELFRDTKLVW 516
Query: 429 SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS--DKGL--ASV 484
S + +S+G +L A+ +W+N L L+ E+ P L + G+ + S +GL A V
Sbjct: 517 SADVHRMSVGGSLVAVSVWLNKLYDRLKGDEDLPQLASVVVLRGQMEKSTVTRGLPIAKV 576
Query: 485 FESHLKE-LNAPFH 497
S L + L++ FH
Sbjct: 577 VYSFLNDTLSSSFH 590
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M GV P+ +Y +++D A +V ++ EM+ G +P+ + Y L+ A+
Sbjct: 78 MLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGA 137
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ ++V R+M+ G + Y LL + G D E+F +M+++ PD+ T++
Sbjct: 138 TAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTT--VPPDTATYN 195
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ + G E +F +ML + EP++ +++ G+ +D L+ +
Sbjct: 196 VLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTE 255
Query: 314 GITP 317
G+ P
Sbjct: 256 GMVP 259
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 9/202 (4%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPW----QVKTIYKEMTDN---GLSPNWNTYASLLR 186
MKA GV P TYN +L RA P + ++ EM + + P+ TY +LL
Sbjct: 1 MKASGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLA 60
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
A + + + R M E G+ Y ++ A G E+F +M ++ +
Sbjct: 61 AAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHT- 119
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD + ++ + G +EA A+ +M G P L+ YG+ R D VR
Sbjct: 120 PDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDG-VRE 178
Query: 307 LNRLPELGITPDDRFCGCLLNV 328
L R + PD L V
Sbjct: 179 LFREMRTTVPPDTATYNVLFRV 200
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 76/200 (38%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E + N + D ++F LI+ Y D + Y EM+ P+ + +L+
Sbjct: 316 EAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLN 375
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
A + K ++E+ P+ Y +L Y R D + EMK
Sbjct: 376 AYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASS 435
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ + +++ D + E D + E C F++++ + G+ A +
Sbjct: 436 THQVIASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARV 495
Query: 272 FNEMLEAGFEPNLFVLTSLI 291
++ L+ G P LF T L+
Sbjct: 496 LDQALKYGLFPELFRDTKLV 515
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 117/237 (49%), Gaps = 2/237 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +ST I+ + A +FD V+EEM+ N +TYN ++ + R+ +
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 301
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM D GLSP+ TY +L+ + ++ ++ EM G++ ++ +Y TL+
Sbjct: 302 EEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKE 361
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T EAF+I ++M S+ QP+ + ++I G++ A + EM++ G P+ F
Sbjct: 362 GKTAEAFDILKEMISA-GVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFT 420
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
L+Q + + D LN + GI P+ G ++N + Q + +E G L+E
Sbjct: 421 YNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN + TL+ + G ++ +EM + GV+PN I Y+NL+ + + + +
Sbjct: 344 LKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRAS 403
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ KEM GL P+ TY L++ + + + + EM+ G+ +V Y ++
Sbjct: 404 KLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGL 463
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + EA + E+M SE +P+++ ++ +I S G +S A +M +A P+
Sbjct: 464 CQNGESKEAGNLLEEM-ISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
LF SLI+ R ++ ++ + G+ PD+
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDE 558
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 123/258 (47%), Gaps = 10/258 (3%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
RASKL ++ R + + +P L++ + + DG + EM+ G+ PN+ +
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNP-----LMQGHFQQHDKDGAFELLNEMRNSGILPNVYS 455
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYRE 203
Y +++ + + + + +EM GL PN YA L+ G ++ G +L+ +
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI--IGHSKEGNISLACEALEK 513
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M + + + YN+L+ + VG +EA E + ++ PD +T+S +I G
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQ-KRGLVPDEFTYSGLIHGYCKTG 572
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
+ +A+ + +ML +G +PN T L++ Y K+ + V L + G PD+ G
Sbjct: 573 NLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYG 632
Query: 324 CLLNVMTQTPKEELGKLV 341
++ ++++ E+ +V
Sbjct: 633 IVIRNLSRSENMEVAFMV 650
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 10/246 (4%)
Query: 78 IWVNPKSPRA-SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKA 136
I +P P + ++ DT R+ L+ Y G+ V M
Sbjct: 142 ILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMAD 201
Query: 137 IGVKPNMITYNNLLDTMGRA---KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
+G+ P N LL + RA + W++K M G+ P+ TY++ + A+ +AR
Sbjct: 202 LGLAPTRRCCNGLLKDLLRADAMELLWKLKGF---MEGAGILPDVYTYSTFIEAHCKARD 258
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ V+ EM+ + ++ YN +++ G +EAF E+M PD++T+
Sbjct: 259 FDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM-VDYGLSPDAFTYG 317
Query: 254 SMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+++ C+G ++ EA+A+ +EM +G +PN+ V +L+ + K +T + L +
Sbjct: 318 ALMN-GLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMIS 376
Query: 313 LGITPD 318
G+ P+
Sbjct: 377 AGVQPN 382
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 119/248 (47%), Gaps = 9/248 (3%)
Query: 70 TGSSPKSYIW-VNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDG 126
+G P ++I+ + ++ S+ E ++ EK + P+ +S+LI + +
Sbjct: 622 SGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEK 681
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ + +EM G++P ++ YN L+D R+ + + ++ + GL PN TY +L+
Sbjct: 682 AVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALID 741
Query: 187 AYGRARYGE--DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
G + G+ D +Y+EM ++G+ +YN L C+D ++A + E+M +
Sbjct: 742 --GNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFN--R 797
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+ F++++ RGK+ E E + + M++ PN + ++ +GKA + +
Sbjct: 798 GYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAH 857
Query: 305 RALNRLPE 312
R L +
Sbjct: 858 RVFAELQQ 865
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 109/229 (47%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ + A+ +K + P+ F S LI Y GN + + +M G+KPN TY +L
Sbjct: 540 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDL 599
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L+ ++ +V +I + M +G P+ + Y ++R R+ E V E+++ G+
Sbjct: 600 LEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 659
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +Y++L++ + ++A + ++M + E +P ++++I G +S A
Sbjct: 660 VPDLHIYSSLISGLCKIADMEKAVGLLDEM-AKEGLEPGIVCYNALIDGFCRSGDISRAR 718
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F+ +L G PN T+LI K D + + GI PD
Sbjct: 719 NVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPD 767
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 9/221 (4%)
Query: 103 KWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + P+ F ++LIK T G + Y +++ G+ P+ TY+ L+ +
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + ++M ++GL PN +TY LL Y ++ E S+ + M G + +Y ++
Sbjct: 576 KADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVI 635
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ + AF + +++ + PD +SS+I+ + +A + +EM + G
Sbjct: 636 RNLSRSENMEVAFMVLTEVEKN-GLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGL 694
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL---GITPD 318
EP + +LI + R+ D+ RA N + G+ P+
Sbjct: 695 EPGIVCYNALIDGF---CRSGDISRARNVFDSILAKGLVPN 732
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LI + GN L ++E M GV+ ++TY +L+ + + + + +
Sbjct: 325 LDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKL 384
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E G+ P+ Y +L+ ++ + + + EM++K + YNTL+
Sbjct: 385 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 444
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G DEA ++ ++M + QPD T++++I+ S +G V +A + NEM+ GF P L
Sbjct: 445 LGRVDEARKLIDEM-TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 503
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LIQ K + DD + + E GITPDD
Sbjct: 504 TYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 537
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 13/228 (5%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKT 164
PNA ++T+I + + G L++ EM+ G + PN TY ++ + R +
Sbjct: 183 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 242
Query: 165 IYKEMTDNG-LSPNWNTYASLLRAY---GRARYGEDTLSVYRE-MKEKGMQLSVTLYNTL 219
++ EM G + P Y +L+ Y G+ DT +YR+ M E+G+ ++V YN L
Sbjct: 243 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKL----DTALLYRDRMVERGVAMTVATYNLL 298
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G EA+E+ E+M + D +T++ +I G V +A +F M G
Sbjct: 299 VHALFMDGRGTEAYELVEEM-GGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRG 357
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ TSLI K + + + + GI PD L+N
Sbjct: 358 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 405
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+K +D R R D ++ LI + T+GN D + EM+ + P+ +TYN L+
Sbjct: 382 DKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 440
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R + + + EMT G+ P+ TY +L+ Y +D L + EM KG
Sbjct: 441 GLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 500
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++ YN L+ G D+A + ++M + PD T+ S+I
Sbjct: 501 TLLTYNALIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLI 544
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 12/257 (4%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L +Y MK++ + + + + LL + A ++ +M L T+ +LR
Sbjct: 108 LRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRH 163
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
A L + R+M +VT YNT++A G A +I +M+ P
Sbjct: 164 LCSAGKPARALELLRQMPRPN---AVT-YNTVIAGFCSRGRVQAALDIMREMRERGGIAP 219
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQCYGKAQRTDDVVRA 306
+ +T+ ++I+ G+V EA +F+EML G +P + +LI Y + D +
Sbjct: 220 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 279
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLG-YVVKLLLEEQDI 364
+R+ E G+ L++ + + E +LVE + L + +L+
Sbjct: 280 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCK 339
Query: 365 EGDFKKEATELFNSISK 381
EG+ KK A E+F ++S+
Sbjct: 340 EGNVKK-ALEIFENMSR 355
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++TLI G + + EEM +P+ TYN L+ + + V +
Sbjct: 534 LDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRL 593
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
E + G PN TYA LL Y +A ED + ++ + + ++LS +YN L+A
Sbjct: 594 LHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCR 653
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G EAF++ + MK S P T+SS+I C G+V EA+ +F EM G PN+F
Sbjct: 654 IGNVTEAFKLRDAMK-SRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVF 712
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+LI + K + D V L + GI P+
Sbjct: 713 CYTALIGGHCKLGQMDIVGSILLEMSSNGIRPN 745
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 8/237 (3%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN 142
K A KLKE+ ++++ D ++ L+K G D + E K G PN
Sbjct: 551 KIEEAFKLKEEMV-----QQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPN 605
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+ TY LL+ +A R +K + + + Y L+ AY R + +
Sbjct: 606 VYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRD 665
Query: 203 EMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
MK +G+ + Y++L+ MC +G DEA EIFE+M+ +E P+ + ++++I
Sbjct: 666 AMKSRGILPTCATYSSLIHGMCC-IGRVDEAKEIFEEMR-NEGLLPNVFCYTALIGGHCK 723
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G++ ++ EM G PN T +I Y K + LN + GI PD
Sbjct: 724 LGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPD 780
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 39/249 (15%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LI Y G+ L V +EM G+KPN +T+N LL R+ + Q + +
Sbjct: 358 PNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQV 417
Query: 166 YKEMTDNGLSPNWNT-------------YASLLRAY-----GRARYGEDTLSV------- 200
+ +GLS N + + S L+ G R + L+
Sbjct: 418 LVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCK 477
Query: 201 -----------YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++ KG+ + N LL + G +E FE+ + M + D
Sbjct: 478 CEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQM-LEKGLLLDR 536
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+++++I C GK+ EA + EM++ F+P+ + L++ + DDV R L+
Sbjct: 537 ISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHE 596
Query: 310 LPELGITPD 318
E G P+
Sbjct: 597 AKEYGFVPN 605
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 90/186 (48%), Gaps = 1/186 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+T I + G ++++ +M+ +GV PN++TYNN++D + ++ R +
Sbjct: 254 DVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFK 313
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M + ++P+ TY L+ + E+ V EM G + ++N L+
Sbjct: 314 DRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRK 373
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA + ++M + + +P+ TF++++ ++ +AE + +L +G N+ V
Sbjct: 374 GDMGEALRVRDEM-AMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDV 432
Query: 287 LTSLIQ 292
+ +I
Sbjct: 433 CSYVIH 438
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
EK + ++ LI Y GN + + MK+ G+ P TY++L+ M R +
Sbjct: 635 EKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDE 694
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
K I++EM + GL PN Y +L+ + + + S+ EM G++ + Y ++
Sbjct: 695 AKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMID 754
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+G EA E+ +M + PD+ T++++
Sbjct: 755 GYCKLGNMKEARELLNEMIRN-GIAPDTVTYNAL 787
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 93/229 (40%), Gaps = 2/229 (0%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ + R + +++P+ + LI F+ V EM ++G PN + +N L
Sbjct: 307 EEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNAL 366
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D R + + EM G+ PN+ T+ +LL+ + R+ E V + G+
Sbjct: 367 IDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGL 426
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+++ + + ++ + A +I + S DS ++ +C C G E
Sbjct: 427 SVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIE 486
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F G N +L+ + ++V L ++ E G+ D
Sbjct: 487 LWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLD 535
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
GV P + T N LL ++ +A + ++ ++ G++P+ T+ + + A+ + D
Sbjct: 216 GVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRVGDA 274
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ ++ +M+ G+ +V YN ++ G +EA F+D P T+ +I+
Sbjct: 275 VDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALR-FKDRMVRSKVNPSVVTYGVLIS 333
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
EA + EM GF PN V +LI Y + + +R + + G+ P
Sbjct: 334 GLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKP 393
Query: 318 D 318
+
Sbjct: 394 N 394
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RNE + ++ LI + G D ++ EM + G++PN ITY ++D +
Sbjct: 703 RNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNM 762
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK-GMQLSVTL-YN 217
+ + + EM NG++P+ TY +L + Y + R E T+++ + K G+ L + YN
Sbjct: 763 KEARELLNEMIRNGIAPDTVTYNALQKGYCKER--ELTVTLQSDHKSNIGLPLEEEITYN 820
Query: 218 TLL 220
TL+
Sbjct: 821 TLI 823
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++ ++G+ + N LL+ +++E+F+ + + PD +TF++ I
Sbjct: 206 FDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFD--LACQGVAPDVFTFTTAIN 263
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G+V +A +F +M G PN+ ++I K+ R ++ +R +R+ + P
Sbjct: 264 AFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNP 323
Query: 318 DDRFCGCLLN 327
G L++
Sbjct: 324 SVVTYGVLIS 333
>gi|399219185|emb|CCF76072.1| unnamed protein product [Babesia microti strain RI]
Length = 767
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 95/183 (51%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
LIK GN CL + +MK G+ P++ TYNN+L + K P + IY +M
Sbjct: 289 LIKQRALDGNLTDCLEILNKMKIYGLNPSVQTYNNVLLSTCALKNPKSARFIYLKMVAES 348
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
L+P+ T++ L++ + AR ++ R+M+ G+ V +++ L+ + G+ D A+
Sbjct: 349 LTPDIKTFSILIKTHVLARDLNSAFALQRKMERDGIASDVVVFSILIDGLVNNGHVDRAW 408
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
E + ++ +PD F+ MI C G+V +A +++EM+ G P T+LI+
Sbjct: 409 ETYNYARTWRLIEPDQVLFTIMIKACYKNGEVEKALNLYDEMIAMGLHPTDLTYTTLIKS 468
Query: 294 YGK 296
GK
Sbjct: 469 MGK 471
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 14/224 (6%)
Query: 81 NPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
NPKS R LK + E D FS LIK + A + + + +M+ G+
Sbjct: 333 NPKSARFIYLKMVA-------ESLTPDIKTFSILIKTHVLARDLNSAFALQRKMERDGIA 385
Query: 141 PNMITYNNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
+++ ++ L+D + G R W+ T T + P+ + +++A + E
Sbjct: 386 SDVVVFSILIDGLVNNGHVDRAWE--TYNYARTWRLIEPDQVLFTIMIKACYKNGEVEKA 443
Query: 198 LSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
L++Y EM G+ + Y TL+ +M G+ D+AF + MK E+ + ++
Sbjct: 444 LNLYDEMIAMGLHPTDLTYTTLIKSMGKRKGFMDKAFHFYNLMKC-EDMPITKSVYQHLL 502
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
C G S AE NE AGF+P + LI K R
Sbjct: 503 KCCGRNGVYSRAELTLNEYKNAGFQPEEVDIYHLIMSMKKGARV 546
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + E+ R + ++ +I +YG A L V+ EMK IG KPN+ TY L++ R
Sbjct: 260 RMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREG 319
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + +++EM G P+ Y +L+ AY RA + ++ M+ G + YN
Sbjct: 320 LCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYN 379
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G EA F+++K + +P + +++ + G V+ E + ++ +
Sbjct: 380 ILVDAYGRAGLHQEAEAAFQELK-QQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHK 438
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+G P+ F L +++ YG+A R DD+ R L +
Sbjct: 439 SGLRPDTFALNAMLNAYGRAGRLDDMERLLGAM 471
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L++ Y +G V EM+ G+ P YN LD + +A+ + +Y+
Sbjct: 201 DTYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQR 260
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M N TY ++ YG+A+ +L V+ EMK G + ++ Y L+ A G
Sbjct: 261 MKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGL 320
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+FE+M+ + + +PD + +++++ S G A +F+ M G EP+
Sbjct: 321 CEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYN 379
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ YG+A + A L + G+ P
Sbjct: 380 ILVDAYGRAGLHQEAEAAFQELKQQGMRP 408
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R D ++ LI YG + ++Y + P TY LL + + + +
Sbjct: 161 FRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAE 220
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM NGL P Y + L +AR E + VY+ MK++ + + Y ++ +
Sbjct: 221 GVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVY 280
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ ++F +MK+ C+P+ T+++++ + G +AE +F EM +AG EP+
Sbjct: 281 GKAKQPMSSLKVFNEMKTI-GCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 339
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ +L++ Y +A + + +G PD
Sbjct: 340 VYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPD 374
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM---- 169
L+ + +GN C V ++ G++P+ N +L+ GRA R ++ + M
Sbjct: 416 LLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGG 475
Query: 170 ---TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
G +P+ +TY L+ YGRA Y + + +R + +G+ V + + + A
Sbjct: 476 DDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARK 535
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
EIFE+M + C PD+ T ++ CS +V + A+ M
Sbjct: 536 KEYGRCLEIFEEMVDA-GCYPDAGTAKVLLAACSDERQVEQVTAIVRSM 583
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK-------AIGVKPNMITYNNLLDTMGRAK 157
R D A + ++ YG AG D + M+ G P+ TYN L++ GRA
Sbjct: 442 RPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAG 501
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+++ ++ + GL+ + T+ S + AY R + L ++ EM + G
Sbjct: 502 YLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAK 561
Query: 218 TLLAMCADVGYTDEAFEIFEDM 239
LLA C+D ++ I M
Sbjct: 562 VLLAACSDERQVEQVTAIVRSM 583
>gi|115456295|ref|NP_001051748.1| Os03g0824100 [Oryza sativa Japonica Group]
gi|113550219|dbj|BAF13662.1| Os03g0824100, partial [Oryza sativa Japonica Group]
Length = 691
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 186/434 (42%), Gaps = 50/434 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ L+ LYG G FDG ++ EM+ V P+ TYN L G +V ++++M
Sbjct: 182 YRVLLDLYGRQGRFDGVRELFREMRTT-VPPDTATYNVLFRVFGDGGFFKEVVELFQDML 240
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ + P+ +T +++ A GR ED V + +GM + Y L+ +
Sbjct: 241 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYE 300
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFVLTS 289
EA+ F +M + P T++++ + G EAEA+F+ M A + + +
Sbjct: 301 EAYVAF-NMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDA 359
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKLVECV 344
LI+ Y + + DD V+A + + PD+R +LN + KE+ +L V
Sbjct: 360 LIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMV 419
Query: 345 EKSNSKLGYVVKL--------------LLEEQD--------------IEGDFKKEAT--- 373
S + Y + L LLEE I+G++ ++
Sbjct: 420 -TVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYDDDSNWQM 478
Query: 374 ---ELFNSISK--DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
L NS + D + N L+D+ A ++L+ L ++ ++ + W
Sbjct: 479 VEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPELFRDTKLVW 538
Query: 429 SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS--DKGL--ASV 484
S + +S+G +L A+ +W+N L L+ E+ P L + G+ + S +GL A V
Sbjct: 539 SADVHRMSVGGSLVAVSVWLNKLYDRLKGDEDLPQLASVVVLRGQMEKSTVTRGLPIAKV 598
Query: 485 FESHLKE-LNAPFH 497
S L + L++ FH
Sbjct: 599 VYSFLNDTLSSSFH 612
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M GV P+ +Y +++D A +V ++ EM+ G +P+ + Y L+ A+
Sbjct: 100 MLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGA 159
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ ++V R+M+ G + Y LL + G D E+F +M+++ PD+ T++
Sbjct: 160 TAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTT--VPPDTATYN 217
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ + G E +F +ML + EP++ +++ G+ +D L+ +
Sbjct: 218 VLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTE 277
Query: 314 GITP 317
G+ P
Sbjct: 278 GMVP 281
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 76/200 (38%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E + N + D ++F LI+ Y D + Y EM+ P+ + +L+
Sbjct: 338 EAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLN 397
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
A + K ++E+ P+ Y +L Y R D + EMK
Sbjct: 398 AYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASS 457
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ + +++ D + E D + E C F++++ + G+ A +
Sbjct: 458 THQVIASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARV 517
Query: 272 FNEMLEAGFEPNLFVLTSLI 291
++ L+ G P LF T L+
Sbjct: 518 LDQALKYGLFPELFRDTKLV 537
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 97/249 (38%), Gaps = 18/249 (7%)
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLS--VTLYNTLLAMCADVGYTDEAFEIFE 237
+Y SL+ AY R E+ + +MK G+ + ++ LL + A++ +
Sbjct: 14 SYTSLIAAYARNALHEEARELLDQMKASGVAPTDPPVPFDMLLGLFAEMRH--------- 64
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
S + +PD T+++++ + R ++E + MLEAG P+ ++ + A
Sbjct: 65 --DPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAGA 122
Query: 298 QRTDDVVRALNRLPELGITPD-DRFCGCL-LNVMTQTPKEELGKLVECVEKSNSKLGYVV 355
V + G TPD + G + + + E + L +
Sbjct: 123 GNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATY 182
Query: 356 KLLLEEQDIEGDFKKEATELFNSISKDV--KKAYCNCLIDLCVNLNLLENACKLLELGLT 413
++LL+ +G F ELF + V A N L + + + +L + L
Sbjct: 183 RVLLDLYGRQGRFDG-VRELFREMRTTVPPDTATYNVLFRVFGDGGFFKEVVELFQDMLH 241
Query: 414 LEVYTDIQS 422
EV DI +
Sbjct: 242 SEVEPDIDT 250
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 11/223 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ ++ + AG D V+ EM+ G+ PN+ TY ++D M RA + + + + +M
Sbjct: 243 YTAVVHAWCRAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMI 302
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD-VGY 228
D+G PN T+ +++RA+ +A E L V+ +M + + + YN L+ C G
Sbjct: 303 DSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCGKGQGN 362
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A ++ + M ++ C PD TF+ M + G + A ++ +M E +PN+
Sbjct: 363 LDAALKVLDKM-IAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYN 421
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
L++ + K + D V+R + GI P+ + FCG
Sbjct: 422 CLLKLFNKEKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCG 464
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ + +L GN +YE+M+ + KPN++TYN LL + K V +
Sbjct: 381 DCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLKLFNKEKSMDMVLRMK 440
Query: 167 KEMTDNGLSPNWNTYASLLRAY-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K M G+ PN +TYA+L+ A+ GR + ++ ++EK + S + + +L +
Sbjct: 441 KNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHATLKEMIEEKSFKPSKQVRDMVLVLLRK 500
Query: 226 VGYTDEAFEIFEDM 239
G + E+ E M
Sbjct: 501 AGQLKKHEELVELM 514
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIYK 167
F+ +++ + AG + L V+ +M + +P++ITYN L++T G+ +K + K
Sbjct: 313 FNAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCGKGQGNLDAALKVLDK 372
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M P+ +T+ + R +Y +M+E + +V YN LL +
Sbjct: 373 -MIAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLKLFNKEK 431
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFV 286
D + ++M E +P+ T++++I RG A A EM+ E F+P+ V
Sbjct: 432 SMDMVLRMKKNM-DVEGIEPNMHTYAALIEAFCGRGNWKRAHATLKEMIEEKSFKPSKQV 490
Query: 287 ---LTSLIQCYGKAQRTDDVV 304
+ L++ G+ ++ +++V
Sbjct: 491 RDMVLVLLRKAGQLKKHEELV 511
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y +++D + + + + EM + + + +L+R Y RA + ++R M+
Sbjct: 138 YASMIDLLAKHHHFSLARHLLDEMRERAVPISSRLIFALIRRYVRAEMPSEAADLFRRME 197
Query: 206 EKGMQL-SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
E G +LLA + EA +F+ ++ PD +++++ G+
Sbjct: 198 EYGSGAPEPATLASLLAALSKKRLASEAQALFDSCRTVFT--PDVVLYTAVVHAWCRAGQ 255
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EAE +F EM ++G PN++ T++I +A + L ++ + G P+
Sbjct: 256 LDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPN 309
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 124/250 (49%), Gaps = 6/250 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I + G N+Y EM G P+++T+N++++ + +A+ + +
Sbjct: 115 DVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLL 174
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M DNG+ PN TY S++ Y E+ ++REM +G+ + +N+ +
Sbjct: 175 RQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKH 234
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + EA EIF M +++ +P+ T+ ++ + G ++ + FN M G N V
Sbjct: 235 GRSKEAAEIFYSM-AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLV 293
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
T LI Y K D+ + L+ + G++PD L++ + + +G+L + V+K
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCR-----MGRLADAVDK 348
Query: 347 SNSKLGYVVK 356
N +G V+
Sbjct: 349 FNQMIGTGVQ 358
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P+ F+ TL+ Y +G D LN++ EM +KP +TYN +LD + RA R +
Sbjct: 463 IGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQ 522
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM G + + TY +L+ R ++ + +++++ ++ ++T NT++
Sbjct: 523 KMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSM 582
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
V +EA ++F + S P++ T+ MI G V EA+ MF+ M ++G P
Sbjct: 583 YTVQRREEAKDLFSAI-SDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
K R+ + E Y A+ + PN + L+ Y T G F ++ + MK G+
Sbjct: 233 KHGRSKEAAEIFYSMAAKGHR----PNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIV 288
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
N + + L+D + + I EM GLSP+ TY++L+ A R D +
Sbjct: 289 ANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDK 348
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TIC 259
+ +M G+Q + +Y++L+ G +A E+ +M ++ +P+ F+S++ +IC
Sbjct: 349 FNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSIC 408
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+V +A +F+ + + G ++ + +LI Y L+ + GI PD
Sbjct: 409 K-EGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPD 466
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 6/238 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D F+TLI Y G +V + M + G+ P+ TYN L++ ++ R
Sbjct: 429 RSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLN 488
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM+D + P TY +L RA + EM G +S+ YN +L
Sbjct: 489 LFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLC 548
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
TDEA +F+ + + N + + T ++MI + EA+ +F+ + ++G PN
Sbjct: 549 RNNCTDEAIVMFQKL-CTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNA 607
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
+I+ K ++ + + + G P C LLN +T E+ G++V+
Sbjct: 608 STYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP----CSRLLNDTIRTLLEK-GEIVK 660
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P + TY +++ RA+RP + + GL + ++L+ + +D + V
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 201 Y-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITI 258
R M E G Y +L D + +A ++ M E C PD T++++I
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GK+ +A +++EM++ GF P++ S+I KA+ D+ L ++ + G+ P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 123/285 (43%), Gaps = 15/285 (5%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGV-KPNMITYNNLLDTMGRAKRPWQV 162
+ PN + +LI+ + T G+ + EM G+ +PN+ +N+++ ++ + R
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDA 416
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I+ + D G + + +L+ Y SV M G+ YNTL+
Sbjct: 417 HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNG 476
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G D+ +F +M S + +P + T++ ++ G+ A+ M +EM+ G
Sbjct: 477 YFKSGRIDDGLNLFREM-SDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTV 535
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEELGKLV 341
+L +++ + TD+ + +L + + + ++N M T +EE L
Sbjct: 536 SLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLF 595
Query: 342 ECVEKSN-----SKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+ S S G +++ LL+E +E EA +F+S+ K
Sbjct: 596 SAISDSGLVPNASTYGIMIRNLLKEGSVE-----EADNMFSSMEK 635
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS---LLRAYGR 190
M+ G P++++Y ++D +V + KEM GL PN TY+S LL G+
Sbjct: 136 MEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGK 195
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
GE L REM ++G+ +Y TL+ +G T A+++F +M++ E PDS
Sbjct: 196 VVEGEKVL---REMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEARE-IVPDSI 251
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
FS++I S GKV EA+ +FNEM++ GFEP+ T+LI Y K N++
Sbjct: 252 AFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQM 311
Query: 311 PELGITPD 318
++G+TP+
Sbjct: 312 VQIGLTPN 319
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI Y G ++ +M IG+ PN++TY L D + ++ +
Sbjct: 284 DEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELL 343
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM GL N +TY +++ +A + + EMKE G+ Y TL+
Sbjct: 344 HEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKT 403
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E+ +M QP TF+ ++ GK+ + E + MLE G PN
Sbjct: 404 GEMVKARELLREM-LDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT 462
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+++ Y + G+ PD
Sbjct: 463 YNSIMKQYCIRNNMRISTEIYRGMCAQGVVPD 494
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+++ + ++T++ AGN + + EEMK G+ P+ ITY L+D + + +
Sbjct: 352 QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARE 411
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +EM D GL P T+ L+ + ED + + M EKG+ + YN+++
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPN 283
+ EI+ M ++ PDS T++ +I C+ + + EA + EM+E F
Sbjct: 472 IRNNMRISTEIYRGM-CAQGVVPDSNTYNILIK-GHCKARNMKEAWFLHKEMVEKRFNLT 529
Query: 284 LFVLTSLIQCYGKAQR 299
+LI+ + K ++
Sbjct: 530 ASSYNALIKGFFKRKK 545
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 103 KWRID----PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
KW ++ PNA +++++K Y N +Y M A GV P+ TYN L+ +A
Sbjct: 449 KWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKA 508
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + ++KEM + + ++Y +L++ + + + + ++ EM+ +G+ S +Y
Sbjct: 509 RNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIY 568
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
N + M + G + E+ ++ + E C D
Sbjct: 569 NLFVDMNYEEGNMETTLELCDE--AIEKCLLD 598
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K +D + + PN +F+TLI Y G F L V M GV+PN++T+N L
Sbjct: 242 QKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTL 301
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ + ++ + ++ EM + P+ TY +LL YG+ E + VY EM G+
Sbjct: 302 INGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGL 361
Query: 210 QLSVTLYNTL-LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ + YN L L +C D G T +A ++ EN P++ TFS++IT R A
Sbjct: 362 KADILTYNALILGLCKD-GKTKKAAGFVREL-DKENLVPNASTFSALITGQCVRNNSERA 419
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DR 320
++ M+ +G PN LI + K + D V+ L + ++PD D
Sbjct: 420 FLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDG 479
Query: 321 FCGC 324
C C
Sbjct: 480 LCRC 483
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 114/273 (41%), Gaps = 8/273 (2%)
Query: 72 SSPKSYIWVNPKSPRASKLKEKSY--DTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLN 129
SS K WV +P + L S T +++ +++ + + + FD L
Sbjct: 85 SSLKLSTWVLKHNPSSHTLDTHSILLHTLSKHRQFKTTQKFLTQTLSSHPPHTLFDALLF 144
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
Y + + + +++L T+ + IY M ++G SP + + L +
Sbjct: 145 SYRLCNS----SSPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLL 200
Query: 190 RARYGEDTLSVYREMKEKG-MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
R R + L+ YRE++ + + +V N ++ +G + F++ E M P+
Sbjct: 201 RLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDM-GLSPN 259
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+F+++I+ +G A + + M+E G +PN+ +LI + K ++ + R N
Sbjct: 260 VVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFN 319
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ + P LLN Q E+G V
Sbjct: 320 EMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRV 352
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 3/238 (1%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
K RA L ++ D R+ + R PN +S LI A + + E MKA G
Sbjct: 164 KLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCS 223
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++ITY L+D + + + + +EM D G PN TY SLL RAR D L++
Sbjct: 224 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 283
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
R+M +G +V Y TL+ VG +A + DM PD ++ +I
Sbjct: 284 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG-TPDLMIYNMLINGLC 342
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+V E+ A+ + G +P++ +S+I ++ R D+ R L + G PD
Sbjct: 343 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 400
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 137/297 (46%), Gaps = 14/297 (4%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
D L + EM+ G +PN++TYN+L+D + + P + + +++ M SP+ TY +
Sbjct: 95 LDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNT 154
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQ-------LSVTLYNTLLAMCADVGYTDEAFEIF 236
LL R E +++++EM ++ +V Y+ L+ +A E+
Sbjct: 155 LLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELL 214
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
E MK+ C PD T++ ++ KV+ A + EML+AG PNL SL+ +
Sbjct: 215 ESMKA-RGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCR 273
Query: 297 AQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT--PKEELGKLVECVEKSNSKLGYV 354
A+R D + + + G TP+ G L++ + + K+ L + ++K + +
Sbjct: 274 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 333
Query: 355 VKLLLEEQDIEGDFKKEATELFNSISKDVKK---AYCNCLIDLCVNLNLLENACKLL 408
+L+ + L ++S +K Y + + LC + N L+ AC+LL
Sbjct: 334 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS-NRLDEACRLL 389
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 8/219 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L++ + G D ++EM++ + PN+ + L+D + +AKR +
Sbjct: 8 DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M +G+ + Y +LL + + + L++ EM++ G + +V YN+L+
Sbjct: 68 RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA-------G 279
D A E+FE MKS E C P T+++++ GK+ A A+F EML+
Sbjct: 128 NEPDRAQELFEHMKSVE-CSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ + LI KA R V L + G +PD
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 225
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + TLI G + +M G P+++ YN L++ + +A + + +
Sbjct: 294 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 353
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ G+ P+ TY+S++ R+ ++ + +K +G V LY+TL+
Sbjct: 354 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 413
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEAF+++E M + + C D T+S++I G+V EA + M+ G P+
Sbjct: 414 AGKVDEAFDLYEVM-AGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
SLI+ D+ + + + P
Sbjct: 473 TYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 504
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI AG D ++YE M G +++TY+ L+D + +A R + +
Sbjct: 400 DVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL 459
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G P+ TY SL++ + ++ + + EM+ S YN L+ +
Sbjct: 460 ARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRM 519
Query: 227 GYTDEAFEIFEDMK----SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
D A + E K ++ D+ +SS+I G+V+EA F EM++ G P
Sbjct: 520 ERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIP 579
Query: 283 NLFVLTSLIQCYGKAQRTDDVVR-ALNRLPELG 314
+ + L++ K++ ++ L+++ +LG
Sbjct: 580 DHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 120/262 (45%), Gaps = 10/262 (3%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA + + D +S++I + D + +K+ G P++I Y+ L+D + +A
Sbjct: 356 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 415
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + +Y+ M +G + TY++L+ +A ++ + M G S YN
Sbjct: 416 KVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 475
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L+ D+ + DEA E+ E+M+ S NC P + T++ +I CR + ++ + E +
Sbjct: 476 SLIKGLCDLNHLDEAIELVEEMERS-NCAPSAVTYNILIH-GMCRMERVDSAVVLLEQAK 533
Query: 278 A------GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
A G + +SLI KA R + + + + G+ PD LL + +
Sbjct: 534 ARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKK 593
Query: 332 TPKEELGKLVECVEKSNSKLGY 353
+ ++L +L V +LGY
Sbjct: 594 S--KDLHELRHLVLDQMVQLGY 613
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
CQPD +T+++++ G++ +A+ F+EM PN+F+ + LI KA+R+ D +
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 305 RALNRLPELGITPD 318
R + GI D
Sbjct: 65 RCFRAMQGSGIVAD 78
>gi|218194011|gb|EEC76438.1| hypothetical protein OsI_14128 [Oryza sativa Indica Group]
Length = 669
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 186/434 (42%), Gaps = 50/434 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ L+ LYG G FDG ++ EM+ V P+ TYN L G +V ++++M
Sbjct: 160 YRVLLDLYGRQGRFDGVRELFREMRTT-VPPDTATYNVLFRVFGDGGFFKEVVELFQDML 218
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ + P+ +T +++ A GR ED V + +GM + Y L+ +
Sbjct: 219 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYE 278
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLFVLTS 289
EA+ F +M + P T++++ + G EAEA+F+ M A + + +
Sbjct: 279 EAYVAF-NMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDA 337
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-----MTQTPKEELGKLVECV 344
LI+ Y + + DD V+A + + PD+R +LN + KE+ +L V
Sbjct: 338 LIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMV 397
Query: 345 EKSNSKLGYVVKL--------------LLEEQD--------------IEGDFKKEAT--- 373
S + Y + L LLEE I+G++ ++
Sbjct: 398 TVP-SIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYDDDSNWQM 456
Query: 374 ---ELFNSISK--DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQW 428
L NS + D + N L+D+ A ++L+ L ++ ++ + W
Sbjct: 457 VEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPELFRDTKLVW 516
Query: 429 SLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYS--DKGL--ASV 484
S + +S+G +L A+ +W+N L L+ E+ P L + G+ + S +GL A V
Sbjct: 517 SADVHRMSVGGSLVAVSVWLNKLYDRLKGDEDLPQLASVVVLRGQMEKSTVTRGLPIAKV 576
Query: 485 FESHLKE-LNAPFH 497
S L + L++ FH
Sbjct: 577 VYSFLNDTLSSSFH 590
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M GV P+ +Y +++D A +V ++ EM G +P+ + Y L+ A+ R
Sbjct: 78 MLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMAATGHTPDPSAYLGLMEAHTRVGA 137
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ ++V R+M+ G + Y LL + G D E+F +M+++ PD+ T++
Sbjct: 138 TAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTT--VPPDTATYN 195
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ + G E +F +ML + EP++ +++ G+ +D L+ +
Sbjct: 196 VLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTE 255
Query: 314 GITP 317
G+ P
Sbjct: 256 GMVP 259
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 9/202 (4%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPW----QVKTIYKEMTDN---GLSPNWNTYASLLR 186
MKA GV P TYN +L RA P + ++ EM + + P+ TY +LL
Sbjct: 1 MKASGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLA 60
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
A + + + R M E G+ Y ++ A G E+F +M ++ +
Sbjct: 61 AAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMAATGHT- 119
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD + ++ + G +EA A+ +M G P L+ YG+ R D VR
Sbjct: 120 PDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDG-VRE 178
Query: 307 LNRLPELGITPDDRFCGCLLNV 328
L R + PD L V
Sbjct: 179 LFREMRTTVPPDTATYNVLFRV 200
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 76/200 (38%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E + N + D ++F LI+ Y D + Y EM+ P+ + +L+
Sbjct: 316 EAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLN 375
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
A + K ++E+ P+ Y +L Y R D + EMK
Sbjct: 376 AYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASS 435
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ + +++ D + E D + E C F++++ + G+ A +
Sbjct: 436 THQVIASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARV 495
Query: 272 FNEMLEAGFEPNLFVLTSLI 291
++ L+ G P LF T L+
Sbjct: 496 LDQALKYGLFPELFRDTKLV 515
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN + P S +I++ G A + ++ ++K +P YN+++ + +
Sbjct: 146 VRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQ 205
Query: 159 PWQVKTIYKEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V +Y EM++ G P+ TY++L+ A+ + + + + EMK+ GMQ + +Y
Sbjct: 206 YEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYT 265
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+A+ + A +FE+M+ + C+PD +T++ +I G+ EA F+EM
Sbjct: 266 MLIALFFKLNNVHGALGLFEEMR-HQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRR 324
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P+ V+ ++I GKA R DD V+ + L P
Sbjct: 325 EGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIP 364
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 4/235 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-R 158
R E R D + +I G AG D + ++EEM + P+++TYN ++ + +K R
Sbjct: 323 RREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSR 382
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
++ + ++ M +G+SP+ TY+ L+ + + E + + EM EKG Y +
Sbjct: 383 ISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCS 442
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSW-TFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ D A E+F+++K ENC S ++ MI G++ +A +F+EM +
Sbjct: 443 LIDALGKAKRYDIAHELFQELK--ENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNK 500
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
G PN++ +L+ +A D+ + + R+ E G PD +LN + +T
Sbjct: 501 LGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKT 555
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 123/278 (44%), Gaps = 5/278 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + G D + + EMK G++P Y L+ + ++
Sbjct: 225 DTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLF 284
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM P+ TY L+R G+A ++ + + EM+ +G + + N ++
Sbjct: 285 EEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKA 344
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++FE+M + + C P T++++I + + ++SE + F M +G P+ F
Sbjct: 345 GRLDDAVKLFEEMGTLQ-CIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPF 403
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK--LVEC 343
+ LI + K RT+ + L + E G P L++ + + + ++ E
Sbjct: 404 TYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQEL 463
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
E S V ++++ G +A LF+ ++K
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRL-DDAVNLFDEMNK 500
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A +D +++E+K + Y ++ +G+A R ++
Sbjct: 437 PAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFD 496
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G +PN Y +L+ RA ++ L+ R M+E G + YN +L A G
Sbjct: 497 EMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTG 556
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+ +MK S +PD+ ++++++ S G EA + EM GFE +L
Sbjct: 557 GPHRAMEMLSNMKQSA-IKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITY 615
Query: 288 TSLIQCYGKA 297
+S+++ GK
Sbjct: 616 SSILEAIGKV 625
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
A++++I + G ++ +Y EM G P+ +TY+ L+ + R +
Sbjct: 191 QAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLN 250
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM DNG+ P Y L+ + + L ++ EM+ + + V Y L+ G
Sbjct: 251 EMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAG 310
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA+ F +M+ E C+PD+ ++MI G++ +A +F EM P++
Sbjct: 311 RFDEAYNFFHEMR-REGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTY 369
Query: 288 TSLIQC-YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
++I+ + R ++ R+ GI+P L++ +T + E
Sbjct: 370 NTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTE 419
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 94/224 (41%), Gaps = 45/224 (20%)
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ ++R G A+ ++++ ++K + Q + YN+++ M G ++ E++ +M +
Sbjct: 159 SDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSN 218
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE-------------------- 281
+C PD+ T+S++I+ G+ A + NEM + G +
Sbjct: 219 EGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVH 278
Query: 282 ---------------PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
P++F T LI+ GKA R D+ + + G PD ++
Sbjct: 279 GALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMI 338
Query: 327 NVMTQTPK--------EELGKLVECVEKSNSKLGYVVKLLLEEQ 362
N + + + EE+G L +C+ S ++K L E +
Sbjct: 339 NFLGKAGRLDDAVKLFEEMGTL-QCI-PSVVTYNTIIKALFESK 380
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 69 KTGSSPKSYIWVNPKS--PRASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFD 125
K G +P Y + S RA L E R E I D N+++ ++ G
Sbjct: 500 KLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 559
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + MK +KP+ ++YN +L M A + + KEM G + TY+S+L
Sbjct: 560 RAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSIL 619
Query: 186 RAYGRA 191
A G+
Sbjct: 620 EAIGKV 625
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 10/309 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI +G G++D + +++EMK G+ P Y LL + + + +
Sbjct: 233 DTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVI 292
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM D G + TY ++ G+A +D V+ +M + G + V L N+L+ + V
Sbjct: 293 KEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKV 352
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + ++F M+S + C+P+ T++++I + C+ SEA + F +M G P+ F
Sbjct: 353 GRLEVTLKLFRKMESWQ-CKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSF 411
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK--LVEC 343
+ LI + K R + + L + E G P L+N + + + E +E
Sbjct: 412 TYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLEL 471
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKK----AYCNCLIDLCVNLN 399
E V ++++ G EA +LFN + K K AY N L+ V
Sbjct: 472 KENCGHSSARVYAVMIKHFGKCGRL-SEAVDLFNEMEKLGSKPDVYAY-NALMSGMVRAG 529
Query: 400 LLENACKLL 408
+++ A LL
Sbjct: 530 MIDEAQSLL 538
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K+ R+ I S ++KL G A + L+V+ ++K KP TYN+++
Sbjct: 148 KTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILM 207
Query: 153 MGRAKRPWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + +V IY EM ++G P+ TY++L+ A+G+ + + + ++ EMKE G+
Sbjct: 208 LKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYP 267
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ +Y TLL + + ++A ++ ++MK + C +T++ I G+V +A +
Sbjct: 268 TAKIYTTLLGIYFKLDKVEKALDVIKEMK-DKGCTLTVFTYTEWIKGLGKAGRVDDAYRV 326
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F +M++ G +P++ ++ SLI GK R + ++ ++ P+
Sbjct: 327 FLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPN 373
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 4/228 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTI 165
D ++LI + G G + L ++ +M++ KPN++TYN ++ + K P + +
Sbjct: 338 DVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASW 397
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++M G++P+ TY+ L+ + + E L + EM EKG Y +L+
Sbjct: 398 FEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGK 457
Query: 226 VGYTDEAFEIFEDMKSSENC-QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
V + A E+F ++K ENC + ++ MI G++SEA +FNEM + G +P++
Sbjct: 458 VKRYEAANELFLELK--ENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDV 515
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ +L+ +A D+ L + E G +PD +LN + +T
Sbjct: 516 YAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLART 563
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 8/233 (3%)
Query: 100 RNEKWRIDPNA--FSTLIK-LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
+ E W+ PN ++T+IK L+ + +E+MK G+ P+ TY+ L+D +
Sbjct: 364 KMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKT 423
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + + +EM + G P Y SL+ + G+ + E ++ E+KE S +Y
Sbjct: 424 NRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVY 483
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
++ G EA ++F +M+ +PD + ++++++ G + EA+++ M
Sbjct: 484 AVMIKHFGKCGRLSEAVDLFNEMEKL-GSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMD 542
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----DRFCGCL 325
E G P+L ++ + D + ++ I PD + GCL
Sbjct: 543 ENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCL 595
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G ++ ++ E+K + Y ++ G+ R + ++
Sbjct: 445 PAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFN 504
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G P+ Y +L+ RA ++ S+ R M E G + +N +L A G
Sbjct: 505 EMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTG 564
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A E+F MKSS +PD+ ++++++ S G EA + EM GFE N
Sbjct: 565 VPDRAIEMFAKMKSS-IIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITY 623
Query: 288 TSLIQCYGKA 297
TS+++ GK
Sbjct: 624 TSILEAVGKV 633
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS-LLRAYGRARYGEDTLSVYREMKEKG 208
LD G W KTI ++M + + Y S +++ G+A+ LSV+ ++K +
Sbjct: 137 LDEAGFYGEMW--KTI-QDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIKGRK 193
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ + T YN+++ M G+ ++ EI+ +M + NC PD+ T+S++I+ G A
Sbjct: 194 CKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSA 253
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+F+EM E G P + T+L+ Y K D V +AL+ + E+ D+ GC L V
Sbjct: 254 IRLFDEMKENGLYPTAKIYTTLLGIYFK---LDKVEKALDVIKEM----KDK--GCTLTV 304
Query: 329 MTQT 332
T T
Sbjct: 305 FTYT 308
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ +IK +G G ++++ EM+ +G KP++ YN L+ M RA + +++ + M
Sbjct: 482 VYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTM 541
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+NG SP+ N++ +L R + + ++ +MK ++ YNT+L + G
Sbjct: 542 DENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLF 601
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+EA ++ +M N + + + +I GKV E A
Sbjct: 602 EEAAKLMREM----NLKGFEYNNITYTSILEAVGKVDEDRA 638
>gi|302768815|ref|XP_002967827.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
gi|300164565|gb|EFJ31174.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
Length = 289
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ +DP +I + G A +FD + V+ I VK + YN LL +A + V
Sbjct: 7 FHLDPYLRIHIIDVLGKASSFDIAVQVFNHFIKISVKKDAGMYNALLHAFCKAGKLEAVD 66
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++++M + + PN +Y L+ +Y +A + +SV++EM +G++ SV YN L+A
Sbjct: 67 DLFRDMKQS-IRPNHLSYNILMHSYVKAGHELTKVVSVFKEMYLRGVKASVASYNILIAA 125
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA---MFNEMLEAG 279
CA EA F +MK ++ +P+ T+SS+I + G V A + EM++A
Sbjct: 126 CATGKQAWEARVFFSNMKK-QDLEPNVITYSSLINVYVASGDVGNCAAALDVLREMVKAE 184
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
PN+ + L+ YG+ R ++ ++ + +LGI P L+ + +++ L +
Sbjct: 185 VMPNVTTFSCLLHGYGQEGRIEEAMKIFQTMKDLGIEPSAITFNILMTMYSKSGHHALAQ 244
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 9/215 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGN-FDGCLNVYEEMKAIGVKPN 142
+A KL+ + D R+ K I PN +++ L+ Y AG+ ++V++EM GVK +
Sbjct: 58 KAGKLE--AVDDLFRDMKQSIRPNHLSYNILMHSYVKAGHELTKVVSVFKEMYLRGVKAS 115
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLS 199
+ +YN L+ K+ W+ + + M L PN TY+SL+ Y G L
Sbjct: 116 VASYNILIAACATGKQAWEARVFFSNMKKQDLEPNVITYSSLINVYVASGDVGNCAAALD 175
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
V REM + + +VT ++ LL G +EA +IF+ MK +P + TF+ ++T+
Sbjct: 176 VLREMVKAEVMPNVTTFSCLLHGYGQEGRIEEAMKIFQTMKDL-GIEPSAITFNILMTMY 234
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
S G + A++ F+EM+E+G EP SL+ C+
Sbjct: 235 SKSGHHALAQSCFHEMIESGLEPTYVSFLSLMYCF 269
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 102 EKWRIDPNA--FSTLIKLY---GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
+K ++PN +S+LI +Y G GN L+V EM V PN+ T++ LL G+
Sbjct: 143 KKQDLEPNVITYSSLINVYVASGDVGNCAAALDVLREMVKAEVMPNVTTFSCLLHGYGQE 202
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + I++ M D G+ P+ T+ L+ Y ++ + S + EM E G++ + +
Sbjct: 203 GRIEEAMKIFQTMKDLGIEPSAITFNILMTMYSKSGHHALAQSCFHEMIESGLEPTYVSF 262
Query: 217 NTLLAMCADVGYTDEA 232
+L+ VG E
Sbjct: 263 LSLMYCFKSVGAYKEV 278
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+T+I Y G D L + M+ +GV+ ++ TYN L + R R + KT+ M
Sbjct: 355 FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMI 414
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ PN+ TY +L+ + + + ++REM EKG SV YN ++ G
Sbjct: 415 EMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIR 474
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E F + PD +T++S++ GKV A +F EM + G EPN+ T+L
Sbjct: 475 EA-ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTAL 533
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
I K R++ + + + + G+ PDD L+
Sbjct: 534 ISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 570
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +I Y AGN V +E GV+PN TY L++ + + + + +M
Sbjct: 285 YTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 344
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ N + +++ Y R +D L + M++ G++L + YNTL V D
Sbjct: 345 GQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLD 404
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + M P+ T++++I+I G + EA +F EM E G P++ +
Sbjct: 405 EAKTLLHIMIEM-GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVM 463
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I Y K + R + + G PD
Sbjct: 464 IDGYTKKGSIREAERFRKEMEKKGFVPD 491
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 5/219 (2%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
NE ++ L+ TA + ++ EMKA V ++ Y +++ RA
Sbjct: 240 NEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMR 299
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + E NG+ PN TY L+ + + E + +M+ +G+ L+ ++NT++
Sbjct: 300 RAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 359
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CR-GKVSEAEAMFNEMLEA 278
G D+A +I M+ + D +T++++ C CR ++ EA+ + + M+E
Sbjct: 360 DGYCRKGMVDDALKIKAAMEKM-GVELDIYTYNTL--ACGLCRVNRLDEAKTLLHIMIEM 416
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G PN T+LI + K + R + E G TP
Sbjct: 417 GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 455
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M +GV PN +TY L+ + + + +++EM + G +P+ TY ++ Y +
Sbjct: 413 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGS 472
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
+ +EM++KG V Y +L+ C + G D A ++FE+MK +P+ +
Sbjct: 473 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVN-GKVDVALKLFEEMK-QRGTEPNVVAY 530
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+++I+ + G+ A ++++ML+AG P+ + ++L+ R D
Sbjct: 531 TALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ P A S ++ +G D + ++M GV N + YN+LLD R K +V+ I
Sbjct: 175 VSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEI 234
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M + G+ TY L+ + AR +++ EMK + V LY ++
Sbjct: 235 LEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCR 294
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A ++ ++ + +P+ T+ +I G++ AE + +M G N
Sbjct: 295 AGNMRRAAKVLDECVGN-GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQI 353
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ ++I Y + DD ++ + ++G+ D
Sbjct: 354 IFNTMIDGYCRKGMVDDALKIKAAMEKMGVELD 386
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLL---AMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+D + +M G+ L+ YN+LL D G E EI E+ E + T
Sbjct: 194 DDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN----EGIEATVGT 249
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++ ++ S +S+ EA+FNEM ++++ T++I Y +A + L+
Sbjct: 250 YTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECV 309
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
G+ P++R G L+N + + E +++
Sbjct: 310 GNGVEPNERTYGVLINGFCKIGQMEAAEML 339
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+++I Y AG + + VY +M A G+ PN +TYN L++ G+ +
Sbjct: 320 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 379
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y++MT P+ T++SL+ Y R +D L ++ +M + +Q +V ++ ++
Sbjct: 380 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 439
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+DEA + ++ + P ++ ++ +I +C C GKV EA + M E G P+
Sbjct: 440 QNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKC-GKVDEANLIRKGMEEKGCRPDK 498
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ T LI Y R + + + + E G +PD C ++ + +
Sbjct: 499 YTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 546
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 91/239 (38%), Gaps = 9/239 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM- 153
+D + + D S L+ A D + + G + YN L+ ++
Sbjct: 167 FDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLI 226
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
GR + V + + D SP+ ++ +++ R + L + M E G
Sbjct: 227 GRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDT 286
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+N L+ E+ ++ C P+ TF+S+I+ GK+ +A A++N
Sbjct: 287 VTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 346
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCGC 324
+M+ +G PN LI YGK V ++ L PD D +C C
Sbjct: 347 DMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRC 405
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 8/246 (3%)
Query: 108 PNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN S I + G T G D N++ EM G++PN++TY ++D + +A+ + + +
Sbjct: 201 PNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++M D G+ P+ +TY L+ Y ++ + + EM G++ Y +LL +
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA +F+ M + +P+ + +I + +G +SE + N M+E G P+
Sbjct: 321 NGRCREARFLFDSM-IRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHH 379
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ + Y K D+ + N++ + G++PD G L++ + + LG++ + V
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCK-----LGRVDDAVL 434
Query: 346 KSNSKL 351
K N +
Sbjct: 435 KFNQMM 440
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 112/249 (44%), Gaps = 2/249 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++ LI Y + G + + + EEM A G+KP+ TY +LL+ + R + + ++
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN Y L+ Y + + M E G+ ++N + A
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA IF MK + PD + ++I G+V +A FN+M+ G PN+FV
Sbjct: 392 AMIDEAMHIFNKMK-QQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECVE 345
SL+ + + + GI PD F +L N+ T+ + +L++ +E
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510
Query: 346 KSNSKLGYV 354
+ ++ G +
Sbjct: 511 RVGTRPGVI 519
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 9/281 (3%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K K + N+ R D F+T++ T G + + M+ +G +P +I+Y L+
Sbjct: 466 KAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLI 525
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
R + M GL P+ TY +LL Y RA +D V+REM G+
Sbjct: 526 GGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGIT 585
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
V Y+T+L EA E++ +M +S Q + W ++ ++ S V EA
Sbjct: 586 PGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK-QWNIWIYNIILNGLSKNNCVDEAFK 644
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL--NV 328
+F + F+ + +I K+ R +D + + G+ P D F CL+ N+
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP-DVFTYCLIAENL 703
Query: 329 MTQTPKEELGKLVECVEKS----NSK-LGYVVKLLLEEQDI 364
+ + EE L +EKS NS+ L +V+ LL DI
Sbjct: 704 IEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI 744
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ + Y D ++++ +MK G+ P+++ Y L+D + + R +
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + G++PN + SL+ E Y EM +G++ V +NT+L
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A + D+ +P +++++I G++ EA + ML G +P+ +
Sbjct: 497 GQVMKAQRLI-DLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWT 555
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+L+ Y +A R DD + GITP
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITP 586
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 40/254 (15%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNV-YEEMKAIGVKPNMITYNNLL------------ 150
WR++ + L+K A +++ + M +G P++++YN LL
Sbjct: 125 WRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEA 184
Query: 151 --------DTMGRAKRPWQVK------------------TIYKEMTDNGLSPNWNTYASL 184
D+ GR+ P V ++ EM D G+ PN TY ++
Sbjct: 185 LELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTV 244
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ +A+ + V+++M +KG++ YN L+ +G E + E+M S+
Sbjct: 245 IDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM-SAHG 303
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+PD +T+ S++ G+ EA +F+ M+ G +PN+ + LI Y ++
Sbjct: 304 LKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMH 363
Query: 305 RALNRLPELGITPD 318
LN + E G++PD
Sbjct: 364 DLLNLMVENGLSPD 377
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 17/279 (6%)
Query: 43 KRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNE 102
K V + E S++ K P T S +Y+ N + A L +D+ R
Sbjct: 290 KEVVRMLEEMSAHGLK-------PDCYTYGSLLNYLCNNGRCREARFL----FDSMIRKG 338
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
I PN + LI Y T G ++ M G+ P+ +N + +
Sbjct: 339 ---IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMID 395
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ I+ +M GLSP+ Y +L+ A + +D + + +M +G+ ++ ++N+L+
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLV 455
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
V ++A E + +M + + +PD F++++ +G+V +A+ + + M G
Sbjct: 456 YGLCTVDKWEKAKEFYFEMLN-QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT 514
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P + T+LI + R D+ ++L+ + +G+ PD+
Sbjct: 515 RPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDE 553
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 4/200 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ Y AG D V+ EM G+ P ++TY+ +L + +R + K +Y
Sbjct: 552 DEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELY 611
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M +G N Y +L + ++ +++ + K QL +T +N ++
Sbjct: 612 LNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKS 671
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +F + SS PD +T+ + G + E + +F+ M ++G PN +
Sbjct: 672 GRNEDAMHLFATI-SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRM 730
Query: 287 LTSLIQCYGKAQRTDDVVRA 306
L +L++ + D+ RA
Sbjct: 731 LNALVR---RLLHRGDITRA 747
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA-RYGE 195
I V P+ TY+ L+ R R + + +G N LL+ A R E
Sbjct: 88 IKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCE 147
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE--NCQPDSWTFS 253
+ + M E G V YNTLL + +EA E+ M S+ +C P+ +++
Sbjct: 148 AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I G+V +A +F EM++ G +PN+ T++I KAQ D ++ +
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 314 GITPDDRFCGCLLN 327
G+ PD+ CL++
Sbjct: 268 GVKPDNDTYNCLIH 281
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L++ G+ L+V +M+ G PN +TYN L+ RA + +
Sbjct: 153 VAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAE 212
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M + GL PN T+ S++ +A ED V+ EM ++G+ YNTL+
Sbjct: 213 RLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGY 272
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
VG + EA +F +M + + PD TF+S+I + G + A + EM E G + N
Sbjct: 273 CKVGCSHEALSVFAEM-TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMN 331
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
T+LI + K DD + A+ + + I P
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQCRIQP 365
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DPNA ++TL+ + AG D + + M+ G+KPN++T+N++++ + +A R +
Sbjct: 189 DPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARK 248
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM GL+P+ +Y +L+ Y + + LSV+ EM KG+ V + +L+ +
Sbjct: 249 VFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMC 308
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + A + +M+ Q + TF+++I +G + +A EM + +P++
Sbjct: 309 KAGNLERAVGLVREMR-ERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSV 367
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI Y R D+ + + G+ PD
Sbjct: 368 VCYNALINGYCMVGRMDEARELVREMEAKGVKPD 401
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 2/199 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G P+++ YN +L + A P + + M +G++PN TY L+RA + ++
Sbjct: 118 GYAPSVLAYNAVLLALSDASLP-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
LSV R+M+ G + YNTL+A G D A E DM +P+ TF+S++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRA-ERLVDMMREGGLKPNLVTFNSVVN 235
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G++ +A +F+EM++ G P+ +L+ Y K + + + + GI P
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295
Query: 318 DDRFCGCLLNVMTQTPKEE 336
D L++VM + E
Sbjct: 296 DVVTFTSLIHVMCKAGNLE 314
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 20/229 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +ST++ Y G+ + ++M GV P+ ITY++L+ + KR ++
Sbjct: 401 DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLF 460
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M GL P+ TY SL+ + + E LS++ EM + G+ V Y+ L+ +
Sbjct: 461 KNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKS 520
Query: 227 GYTDEA----FEIFEDMKSSENCQPDSW----------TFSSMITICSCRGKVSEAEAMF 272
T EA F+++ + N + D+ + +++ +G ++EA+ ++
Sbjct: 521 ARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVY 580
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN---RLPELGITPD 318
+L+ + + V + LI + R +V++AL+ ++ + G P+
Sbjct: 581 QSILDRNWNLDGSVYSVLIHGHC---REGNVMKALSFHKQMLQCGFAPN 626
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 94/229 (41%), Gaps = 16/229 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR-------- 158
D +++LI + GN + L++++EM GV P+++TY+ L++ + ++ R
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530
Query: 159 -------PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
P Y + + + +LL+ + + VY+ + ++ L
Sbjct: 531 FKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNL 590
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++Y+ L+ G +A + M P+S + S+I +G V EA+ +
Sbjct: 591 DGSVYSVLIHGHCREGNVMKALSFHKQMLQC-GFAPNSTSTISLIRGLFEKGMVVEADQV 649
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
++L + +LI K D V+ L+ + G+ P R
Sbjct: 650 IQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPSPR 698
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ L+ AGN D ++ + M+ GV PN+ TYN L+ + R R ++
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ P TY + YG++ + L + +MK +G+ ++ N L A++
Sbjct: 428 NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEM 487
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA IF +KS+ PDS T++ M+ S G+V EA + ++M E EP++ V
Sbjct: 488 GRLREAKVIFNRLKSN-GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIV 546
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ SLI KA R D+ + RL ++ + P
Sbjct: 547 INSLINTLYKAGRVDEAWKMFCRLKDMKLAP 577
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R + ++ +++ LI L +G L +Y M G+KP++ T++ L+ G+ +
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR 243
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
VK++ +EM GL PN TY +R GRA ++ + + M++ G V Y
Sbjct: 244 DTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYT 303
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G D+A E+F MK+S + +PD T+ +M+ S G + + ++EM
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSH-KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEA 362
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ P++ T L+ KA D+ L+ + + G+ P+
Sbjct: 363 DGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPN 403
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTL--IKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R ++L + + D E + P A++ + I YG +G D L +E+MK G+ PN+
Sbjct: 416 RVNRLDD-ALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNI 474
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ N L ++ R + K I+ + NGL+P+ TY +++ Y +A ++ + + +
Sbjct: 475 VACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSD 534
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF---EDMKSSENCQPDSWTFSSMITICS 260
M E + + + N+L+ G DEA+++F +DMK + P T++++I
Sbjct: 535 MSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLA----PTVVTYNTLIAGLG 590
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+V A +F M G PN +++ C K D ++ L ++ + PD
Sbjct: 591 KEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPD 648
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 1/211 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P + L+ +G + ++EEM G +PN YN L++ G+ ++K
Sbjct: 895 PCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFK 954
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M G+ P+ +Y SL+ A +D L + ++K+ G+ L YN ++
Sbjct: 955 RMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSH 1014
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+EA ++++M+ S PD +T++S+I G V +A ++ E+ G EPN+F
Sbjct: 1015 RIEEALTLYDEMQ-SRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTY 1073
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI+ Y + +D R+ G +P+
Sbjct: 1074 NALIRGYSMSGNSDSAYAVYKRMMVGGCSPN 1104
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 37/285 (12%)
Query: 86 RASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RA ++ E R ++ D ++ LI TAG D + ++ +MKA KP+ +
Sbjct: 276 RAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRV 335
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY +LD +VK + EM +G +P+ T+ L+ A +A ++ + M
Sbjct: 336 TYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVM 395
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-------- 256
+++G+ ++ YNTL++ V D+A ++F +M++ P ++T+ I
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETL-GVVPTAYTYILFIDFYGKSGR 454
Query: 257 ------------------TICSCR---------GKVSEAEAMFNEMLEAGFEPNLFVLTS 289
I +C G++ EA+ +FN + G P+
Sbjct: 455 SDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNM 514
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+++CY KA + D+ + L+ + E PD L+N + + +
Sbjct: 515 MMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR 559
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 1/158 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R E R D ++++L+ AG D L+ +E++K G+ + I YN ++D +GR+
Sbjct: 955 RMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSH 1014
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + T+Y EM G++P+ TY SL+ G A E +Y E++ G++ +V YN
Sbjct: 1015 RIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYN 1074
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
L+ + G +D A+ +++ M C P++ TF+ +
Sbjct: 1075 ALIRGYSMSGNSDSAYAVYKRMMVG-GCSPNTGTFAQL 1111
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ LI+ + N + N++ EMK G P++ TYN LLD G++ + ++ +Y++M
Sbjct: 792 SYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQM 851
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ PN T+ ++ ++ + L ++ ++ + Y LL G
Sbjct: 852 ICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRL 911
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+EA E+FE+M C+P++ ++ +I G V+ A +F M+ G P+L TS
Sbjct: 912 EEAKELFEEM-VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTS 970
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C +A R DD + +L + G+ D
Sbjct: 971 LVGCLCEAGRVDDALHYFEKLKQTGLYLD 999
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
+ D L+++ ++ + P TY LLD + ++ R + K +++EM D G PN Y
Sbjct: 875 SLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYN 934
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
L+ +G+ +++ M +G++ + Y +L+ + G D+A FE +K +
Sbjct: 935 ILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQT 994
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
DS ++ MI ++ EA +++EM G P+LF SLI G A +
Sbjct: 995 -GLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQ 1053
Query: 303 VVRALNRLPELGITPD 318
+ L +G+ P+
Sbjct: 1054 AGKLYEELQFIGLEPN 1069
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 133/283 (46%), Gaps = 10/283 (3%)
Query: 88 SKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
+L+E K R ++ D ++ ++K Y AG D + + +M +P++I
Sbjct: 488 GRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVI 547
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N+L++T+ +A R + ++ + D L+P TY +L+ G+ + + ++ M
Sbjct: 548 NSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTG 607
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G + +NT+L D A ++ M ++ NC PD TF+++I +VS
Sbjct: 608 NGCPPNTITFNTILDCLCKNDEVDLALKMLYKM-TTMNCMPDVLTFNTIIHGLVIEKRVS 666
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR-ALNRLPELGITPDDRFCGCL 325
+A +F++M + P+ L +L+ K +D + A + + LG+ D RF L
Sbjct: 667 DAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDL 725
Query: 326 L-NVMTQTPKEE---LGKLVEC--VEKSNSKLGYVVKLLLEEQ 362
+ ++TQ E+ G + C V K S L ++K+L + +
Sbjct: 726 MGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHK 768
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K +GVKP + +YN L++ ++ EM + G +P+ TY LL A+G++
Sbjct: 782 KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ +Y +M + + +N ++A D+A ++F D+ S + P T+
Sbjct: 842 NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD-FSPTPCTYGP 900
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
++ G++ EA+ +F EM++ G PN + LI +GK + R+ G
Sbjct: 901 LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960
Query: 315 ITPDDR----FCGCL 325
I PD + GCL
Sbjct: 961 IRPDLKSYTSLVGCL 975
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
R KE G++ ++ YN L+ V + A+ +F +MK++ C PD +T++ ++
Sbjct: 779 RFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA-GCAPDVFTYNLLLDAHGK 837
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
GK++E ++ +M+ + +PN +I K+ D + L +P
Sbjct: 838 SGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCT 897
Query: 322 CGCLLNVMTQTPKEELGK 339
G LL+ + ++ + E K
Sbjct: 898 YGPLLDGLLKSGRLEEAK 915
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 110/220 (50%), Gaps = 3/220 (1%)
Query: 88 SKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
++ EK+ + R + E+ R + ++ +I +YG A L V+ EMK++G KPN+ T
Sbjct: 255 ARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICT 314
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L++ R + + +++EM G P+ Y +L+ AY RA + ++ M+
Sbjct: 315 YTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLME 374
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
G + YN L+ G EA F+++K + +P + +++ + G V
Sbjct: 375 HMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELK-QQGMRPTMKSHMLLLSAHARSGNV 433
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+ E + ++ ++G P+ F L +++ YG+A R DD+ R
Sbjct: 434 ARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMER 473
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 2/226 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ VY+ MK + N TY +++ G+A +P +++EM G PN TY +L+ A
Sbjct: 262 VEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNA 321
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R E V+ EM++ G + V YN L+ + G A EIF M+ C+P
Sbjct: 322 FAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM-GCEP 380
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D +++ ++ G EAEA F E+ + G P + L+ + ++ +
Sbjct: 381 DRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVM 440
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLG 352
+L + G+ PD +LN + + +++ +L +E+ + +
Sbjct: 441 AQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIA 486
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L++ Y +G V EM+ G+ P YN LD + +A+ + +Y+
Sbjct: 208 DTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQR 267
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M N TY ++ YG+A +L V+REMK G + ++ Y L+ A G
Sbjct: 268 MKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGL 327
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+FE+M+ + + +PD + +++++ S G A +F+ M G EP+
Sbjct: 328 CEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYN 386
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ +G+A + A L + G+ P
Sbjct: 387 ILVDAFGRAGLHQEAEAAFQELKQQGMRP 415
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 4/249 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++ L++ Y AG G ++ M+ +G +P+ +YN L+D GRA + + +
Sbjct: 346 DVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAF 405
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+E+ G+ P ++ LL A+ R+ V ++ + G++ N +L
Sbjct: 406 QELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRA 465
Query: 227 GYTDEAFEIFEDMKSSENC---QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G D+ +F M+ + PD+ T++ M+ G + EA F + G +
Sbjct: 466 GRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAAD 525
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
+ TS I Y + + +R + + G PD LL + + E++ +V
Sbjct: 526 VVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVKAIVR 585
Query: 343 CVEKSNSKL 351
+ K L
Sbjct: 586 SMHKDAKTL 594
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R +R D ++ LI YG Y + P TY LL + +
Sbjct: 164 RRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQL 223
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + + EM NG+ P Y + L +AR E + VY+ MK++ + + Y +
Sbjct: 224 HRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLM 283
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + + +F +MKS C+P+ T+++++ + G +AE +F EM +AG
Sbjct: 284 INVYGKANQPMSSLRVFREMKSV-GCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 342
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EP+++ +L++ Y +A + + +G PD
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPD 381
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK----AIGVKPNMITYNNLLDTMGRAKRPW 160
R D A + ++ YG AG D ++ M+ AI P+ TYN +++ GRA
Sbjct: 449 RPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLD 508
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+++ ++ + GL+ + T+ S + AY R + L V+ EM + G LL
Sbjct: 509 RMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLL 568
Query: 221 AMCADVGYTDEAFEIFEDM 239
A C+D ++ I M
Sbjct: 569 AACSDERQVEQVKAIVRSM 587
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++T++++YG A F ++++ M+ ++ N++TYN ++ G+
Sbjct: 360 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 419
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+A + +++++++ G+++ LY T++
Sbjct: 420 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 479
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
VG A + ++K PD+ + ITI + G EA +F + E+G
Sbjct: 480 VAYERVGLMGHAKRLLHELK-----LPDNIPRETAITILAKAGSTEEATWVFRQAFESGE 534
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I Y + QR +V+ ++ G PD +LN
Sbjct: 535 VKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLN 581
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+ P+++ YN++++ G+AK + + +
Sbjct: 226 DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLI 285
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + G+SPN +Y++LL Y + LSV+ EMKE L +T N ++ + +
Sbjct: 286 KEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQL 345
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F ++ + +P+ ++++++ + EA +F M E N+
Sbjct: 346 DMVKEADRLFWSLRKM-DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVT 404
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I+ YGK + + + GI P+
Sbjct: 405 YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 436
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ R + +I+
Sbjct: 191 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF 250
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G++P+ Y S++ YG+A+ ++ + +EM E G+ + Y+TLL++ +
Sbjct: 251 SRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVEN 310
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +MK NC D T + MI + V EA+ +F + + EPN+
Sbjct: 311 HKFLEALSVFAEMKEV-NCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 369
Query: 287 LTSLIQCYGKAQ 298
++++ YG+A+
Sbjct: 370 YNTILRVYGEAE 381
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+EE K P++ YN +L + RAK+ ++ EM L+P+ TY++L+ ++G
Sbjct: 147 VHEEAK---YTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFG 203
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ + LS ++M++ + + LY+ L+ + + +A IF +K S PD
Sbjct: 204 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRS-GITPDL 262
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++SMI + EA + EM EAG PN ++L+ Y + + + +
Sbjct: 263 VAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAE 322
Query: 310 LPELGITPDDRFCGCLLNVMTQ 331
+ E+ D C +++V Q
Sbjct: 323 MKEVNCPLDLTTCNIMIDVYGQ 344
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + AG+ + V+ + G ++ + +++ R +R V ++++M
Sbjct: 508 TAITILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 567
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G P+ N A +L AYG+ R E +VYREM+E+G C
Sbjct: 568 GYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEG--------------C--------- 604
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL------FV 286
+F PD F M+++ S + E++F E LE+ +PN+ V
Sbjct: 605 --VF----------PDEVHF-QMLSLYSSKKDFEMVESLF-ERLES--DPNVNSKELHLV 648
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ +L Y +A + +D R +NR+ E GI
Sbjct: 649 VAAL---YERADKLNDASRVMNRMRERGI 674
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ F+ LI + GN L ++E M GV+ ++TY L+ + + + + +
Sbjct: 659 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 718
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E G+ P+ Y +L+ ++ + + + EM++K + YNTL+
Sbjct: 719 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 778
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G DEA ++ ++M + QPD T++++I+ S +G V +A + NEM+ GF P L
Sbjct: 779 LGRVDEARKLIDEM-TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 837
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LIQ K + DD + + E GITPDD
Sbjct: 838 TYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 871
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 9/226 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKT 164
PNA ++T+I + + G L++ EM+ G + PN TY ++ + R +
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 576
Query: 165 IYKEMTDNG-LSPNWNTYASLLRAYGRARYGE-DTLSVYRE-MKEKGMQLSVTLYNTLLA 221
++ EM G + P Y +L+ Y G+ DT +YR+ M E+G+ ++V YN L+
Sbjct: 577 VFDEMLTKGEVKPEAVMYNALIGGY--CDQGKLDTALLYRDRMVERGVAMTVATYNLLVH 634
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G EA+E+ E+M + PD +T++ +I G V +A +F M G
Sbjct: 635 ALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 693
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ T+LI K + + + + GI PD L+N
Sbjct: 694 ATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 739
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+K +D R R D ++ LI + T+GN D + EM+ + P+ +TYN L+
Sbjct: 716 DKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 774
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R + + + EMT+ G+ P+ TY +L+ Y +D L + EM KG
Sbjct: 775 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 834
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++ YN L+ G D+A + ++M + PD T+ S+I
Sbjct: 835 TLLTYNALIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLI 878
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPWQVKTIYK 167
++ LI G +++E G++P+++ YN L++ T G R ++ I
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE---IMG 755
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM ++P+ TY +L+R ++ + EM E+G+Q + YNTL++ + G
Sbjct: 756 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 815
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A I +M + + P T++++I G+ +AE M EM+E G P+
Sbjct: 816 DVKDALRIRNEMMN-KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 874
Query: 288 TSLIQ 292
SLI+
Sbjct: 875 ISLIE 879
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 16/259 (6%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L +Y MK++ + + + + LL + A ++ +M L T+ +LR
Sbjct: 442 LRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRH 497
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
A L + R+M + YNT++A G A +I +M+ P
Sbjct: 498 LCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 553
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQCYGKAQRTDDVVRA 306
+ +T+ ++I+ G+V EA +F+EML G +P + +LI Y + D +
Sbjct: 554 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 613
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLG---YVVKLLLEEQ 362
+R+ E G+ L++ + + E +LVE E L + +L+
Sbjct: 614 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE--EMGGKGLAPDVFTYNILINGH 671
Query: 363 DIEGDFKKEATELFNSISK 381
EG+ KK A E+F ++S+
Sbjct: 672 CKEGNVKK-ALEIFENMSR 689
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 11/223 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ + +G + V+ EM+ GV PN+ TY ++D M RA + + + + +M
Sbjct: 252 YTTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMI 311
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT- 229
D+G PN T+ +++RA+ +A E L V+ +M++ G + + YN L+ G +
Sbjct: 312 DSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSN 371
Query: 230 -DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A ++ M ++ C PD TF+ M+ + G V+ A ++ M E +PN+
Sbjct: 372 LDAAMKMLTRM-IAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYN 430
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
L++ + + D V+R + G+ P+ + FCG
Sbjct: 431 LLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCG 473
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ ++KL GN + +YE M+ + KPN++TYN L+ K V I
Sbjct: 390 DCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIK 449
Query: 167 KEMTDNGLSPNWNTYASLLRAY-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K+M G+ PN NTYA+L+ A+ GR + +++ ++EK ++ + +Y+ +LA+
Sbjct: 450 KDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRK 509
Query: 226 VGYTDEAFEIFEDM 239
G E+ E M
Sbjct: 510 AGQLRRHEELVEMM 523
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y ++D + + + + EM + + + +L+R Y RA + ++R M+
Sbjct: 147 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 206
Query: 206 EKGMQLS--VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
E G TL +LL + EA +F+ KS PD +++++ G
Sbjct: 207 EYGAGAPDPATL-ASLLGALSKKRLASEAQAMFDSYKSV--FTPDVVLYTTLVHAWCRSG 263
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++EAE +F EM +AG PN++ T++I +A + L ++ + G P+
Sbjct: 264 RLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPN 318
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 84/207 (40%), Gaps = 37/207 (17%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM-GRAK------------ 157
F+ +++ + AG + L V+ +M+ +G +P++ITYN L++T G+ +
Sbjct: 322 FNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTR 381
Query: 158 -------------RPW-----------QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
P + +Y+ M + PN TY L+R + +
Sbjct: 382 MIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKS 441
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ L + ++M +G++ +V Y L+ G A +M + +P +
Sbjct: 442 MDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYD 501
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGF 280
++ + G++ E + M++ GF
Sbjct: 502 MVLALLRKAGQLRRHEELVEMMVDRGF 528
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ F+ LI + GN L ++E M GV+ ++TY L+ + + + + +
Sbjct: 654 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 713
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E G+ P+ Y +L+ ++ + + + EM++K + YNTL+
Sbjct: 714 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 773
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G DEA ++ ++M + QPD T++++I+ S +G V +A + NEM+ GF P L
Sbjct: 774 LGRVDEARKLIDEM-TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 832
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LIQ K + DD + + E GITPDD
Sbjct: 833 TYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 866
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 9/226 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKT 164
PNA ++T+I + + G L++ EM+ G + PN TY ++ + R +
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 571
Query: 165 IYKEMTDNG-LSPNWNTYASLLRAYGRARYGE-DTLSVYRE-MKEKGMQLSVTLYNTLLA 221
++ EM G + P Y +L+ Y G+ DT +YR+ M E+G+ ++V YN L+
Sbjct: 572 VFDEMLTKGEVKPEAVMYNALIGGY--CDQGKLDTALLYRDRMVERGVAMTVATYNLLVH 629
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G EA+E+ E+M + PD +T++ +I G V +A +F M G
Sbjct: 630 ALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 688
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ T+LI K + + + + GI PD L+N
Sbjct: 689 ATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 734
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+K +D R R D ++ LI + T+GN D + EM+ + P+ +TYN L+
Sbjct: 711 DKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 769
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R + + + EMT+ G+ P+ TY +L+ Y +D L + EM KG
Sbjct: 770 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 829
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++ YN L+ G D+A + ++M + PD T+ S+I
Sbjct: 830 TLLTYNALIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLI 873
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPWQVKTIYK 167
++ LI G +++E G++P+++ YN L++ T G R ++ I
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE---IMG 750
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM ++P+ TY +L+R ++ + EM E+G+Q + YNTL++ + G
Sbjct: 751 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 810
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A I +M + + P T++++I G+ +AE M EM+E G P+
Sbjct: 811 DVKDALRIRNEMMN-KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 869
Query: 288 TSLIQ 292
SLI+
Sbjct: 870 ISLIE 874
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 16/259 (6%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L +Y MK++ + + + + LL + A ++ +M L T+ +LR
Sbjct: 437 LRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRH 492
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
A L + R+M + YNT++A G A +I +M+ P
Sbjct: 493 LCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 548
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQCYGKAQRTDDVVRA 306
+ +T+ ++I+ G+V EA +F+EML G +P + +LI Y + D +
Sbjct: 549 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 608
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLG---YVVKLLLEEQ 362
+R+ E G+ L++ + + E +LVE E L + +L+
Sbjct: 609 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE--EMGGKGLAPDVFTYNILINGH 666
Query: 363 DIEGDFKKEATELFNSISK 381
EG+ KK A E+F ++S+
Sbjct: 667 CKEGNVKK-ALEIFENMSR 684
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
++DP+ AFST+I Y A FD L +YE M + G+ P+ +TY +L + +A+R
Sbjct: 306 KLDPDEVAFSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADA 365
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+++++ + + + YA ++ Y + E+ L V+ M G +YN +L M
Sbjct: 366 ALLWEDLVEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHM 425
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+G DEA ++F M+ E C +++++M+ IC K A ++F++M
Sbjct: 426 LGKLGRYDEAVDVFTAMQRQELC-TSKYSYATMLHICEKADKFELAASIFSDMQMKRCPV 484
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ V TS+I YGKA D+ + + EL + D + + NV + K
Sbjct: 485 DEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGK 536
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
AR + +D A++T+IK AG ++ Y + +G++P++ TY+ ++ ++ R
Sbjct: 853 ARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGR 912
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++K++ G P+ Y+ ++ Y ++ E ++ MK +G++ YN
Sbjct: 913 TRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNN 972
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ A G +A ++ +M + C P S TF +I+ + RGK +EAE M A
Sbjct: 973 LIDAYARAGQFAKAEQLLVEMAKA-GCPPSSVTFLLLISAYAHRGKCNEAENALERMQTA 1031
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
P + ++ + +A+ + + ++ GI PD ++ ++ + E G
Sbjct: 1032 AIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEG 1091
Query: 339 KLVECVEKSNSKL 351
+ +K+ +KL
Sbjct: 1092 --LSLYKKTEAKL 1102
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E + P A++ +I +Y G F+ L V+E M G P+ + YN +L +G+ R +
Sbjct: 375 ESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDE 434
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ M L + +YA++L +A E S++ +M+ K + +Y ++++
Sbjct: 435 AVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVIS 494
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ G DEA ++F++M + D TFS M + GK +EA + E+L G
Sbjct: 495 IYGKAGLYDEAEKLFQEM-NELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLN 553
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ +L+ CY KA + + L E GI
Sbjct: 554 LDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIA 588
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++++I +YG AG +D +++EM + + ++ T++ + + +A + + +
Sbjct: 484 VDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQV 543
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+E+ GL+ + + +LL Y +A E ++ + E G+ + YN +L++ A+
Sbjct: 544 MEELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIA-DLMAYNDMLSLYAE 602
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A +F+ +KSS + QPD F +M+ + V+ AE + +M E GF P+
Sbjct: 603 FDMLEDAKLLFQQLKSS-SIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHI 661
Query: 286 VLTSLIQCYGKAQRTDD 302
LI YG+A R ++
Sbjct: 662 TQGILINAYGEANRIEE 678
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R + D S L+ Y AG + + + G+ +++ YN ++ RA
Sbjct: 817 KMRQIGLKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAG 876
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + Y +T+ GL P+ TY +++ + ++ D +++++K G Q +Y+
Sbjct: 877 RLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYS 936
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
++ A G + A ++FE MK +P +++++I + G+ ++AE + EM +
Sbjct: 937 QMMNCYAKSGMYEHAADLFEAMK-LRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAK 995
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
AG P+ LI Y + ++ AL R+ I P R
Sbjct: 996 AGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVR 1038
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 7/278 (2%)
Query: 65 YPHGKTGSSP---KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTA 121
+ HG + P KS++ + R +E SYD R W + F L +
Sbjct: 196 HAHGGYAAYPMRYKSHVESAIATVRGLATQE-SYDIRRVMAPW-VGRLTFRELCTVLKWQ 253
Query: 122 GNFDGCLNVYEEMK-AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
+ + MK + P++I Y+ LL GR K+ + ++EM D L P+
Sbjct: 254 QGWKEAQEFFAWMKLQLSYIPSVIVYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEVA 313
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
+++++ Y A ++ L++Y M +G+ S Y T+L +A ++ED+
Sbjct: 314 FSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDL- 372
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
E+ + ++ MITI G+ EA +F ML AG+ P+ + ++ GK R
Sbjct: 373 VEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRY 432
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
D+ V + + +L++ + K EL
Sbjct: 433 DEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELA 470
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 80 VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGV 139
V P S++++K +D ++ + LI YG AG ++ + E+
Sbjct: 743 VPPAEMLHSRMQDKGFD---------VEDSTLGHLIAAYGKAGRYEVLTKLKPELP---- 789
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
N Y++++ + + + + ++M GL + + LL AY +A ED +
Sbjct: 790 -RNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADA 848
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
+ + G+ L + YNT++ G +A + + + ++ +P T+ +MI++
Sbjct: 849 LIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSL-TNLGLRPSLQTYDTMISVF 907
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ G+ +AE MF ++ AGF+P+ V + ++ CY K+ + + G+ P +
Sbjct: 908 AKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHE 967
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/240 (19%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++T++ + A F+ +++ +M+ + + Y +++ G+A + + +++EM
Sbjct: 453 SYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEM 512
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ L + T++ + +A + + V E+ KG+ L T + TLL G
Sbjct: 513 NELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDTAWKTLLHCYVKAGNV 572
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ A + F+ + E+ D ++ M+++ + + +A+ +F ++ + +P+ +
Sbjct: 573 ERATKTFKTL--VESGIADLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGT 630
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
+++ Y A L ++ E G TPD G L+N + + EE L+E K +
Sbjct: 631 MVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKED 690
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 93/237 (39%), Gaps = 32/237 (13%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D A+ TL+ Y AGN + ++ + G+ +++ YN++L K +
Sbjct: 554 LDDTAWKTLLHCYVKAGNVERATKTFKTLVESGI-ADLMAYNDMLSLYAEFDMLEDAKLL 612
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++++ + + P+ + ++++ Y A V R+M+EKG L+ +
Sbjct: 613 FQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGE 672
Query: 226 VGYTDEA--------------------------FEIFEDM-----KSSENCQPDSWTFSS 254
+EA F +F+ + E+ DS ++
Sbjct: 673 ANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLLLHRVLESFTLDSAAYNQ 732
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+ G+V AE + + M + GF+ L LI YGKA R + + + LP
Sbjct: 733 LTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKLKPELP 789
>gi|302817236|ref|XP_002990294.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
gi|300141856|gb|EFJ08563.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
Length = 1139
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
++DP+ AFST+I Y A FD L +YE M + G+ P+ +TY +L + +A+R
Sbjct: 302 KLDPDEVAFSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADA 361
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+++++ + + + YA ++ Y + E+ L V+ M G +YN +L M
Sbjct: 362 ALLWEDLVEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHM 421
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+G DEA ++F M+ E C +++++M+ IC K A ++F++M
Sbjct: 422 LGKLGRYDEAVDVFTAMQRQELC-TSKYSYATMLHICEKADKFELAASIFSDMQMKRCPV 480
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ V TS+I YGKA D+ + + EL + D + + NV + K
Sbjct: 481 DEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGK 532
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++T+IK G ++ Y + +G++P++ TY+ ++ ++ R + ++K++
Sbjct: 863 AYNTIIKADLRPGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDL 922
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P+ Y+ ++ Y ++ E ++ MK +G++ YN L+ A G
Sbjct: 923 KSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQF 982
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A ++ +M + C P S TF +I+ + RGK +EAE M A P +
Sbjct: 983 AKAEQLLVEMAKA-GCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNE 1041
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
++ + +A+ + + ++ GI PD ++ ++ + E G + +K+ +
Sbjct: 1042 VMLAFSRARLPRQAMESYLKMERSGIQPDVVSSRTMIRILLEGSMFEEG--LSLYKKTEA 1099
Query: 350 KL 351
KL
Sbjct: 1100 KL 1101
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E + P A++ +I +Y G F+ L V+E M G P+ + YN +L +G+ R +
Sbjct: 371 ESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRYDE 430
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ M L + +YA++L +A E S++ +M+ K + +Y ++++
Sbjct: 431 AVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVIS 490
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ G DEA ++F++M + D TFS M + GK +EA + E+L G
Sbjct: 491 IYGKAGLYDEAEKLFQEM-NELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLN 549
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ +L+ CY KA + + L E GI
Sbjct: 550 LDDMAWKTLLHCYVKAGNVERATKTFKTLVESGIA 584
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++++I +YG AG +D +++EM + + ++ T++ + + +A + + +
Sbjct: 480 VDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQV 539
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+E+ GL+ + + +LL Y +A E ++ + E G+ + YN +L++ A+
Sbjct: 540 MEELLAKGLNLDDMAWKTLLHCYVKAGNVERATKTFKTLVESGIA-DLMAYNDVLSLYAE 598
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A +F+ +KSS + QPD F +M+ + V+ AE + +M E GF P+
Sbjct: 599 FDMLEDAKLLFQQLKSS-SIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHI 657
Query: 286 VLTSLIQCYGKAQRTDD 302
LI YG+A R ++
Sbjct: 658 TQGILINAYGEANRIEE 674
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 7/278 (2%)
Query: 65 YPHGKTGSSP---KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTA 121
+ HG + P KS++ + R +E SYD R W + F L +
Sbjct: 192 HAHGGYAAYPMRYKSHVESAIATVRGLATQE-SYDIRRVMAPW-VGRLTFRELCTVLKWQ 249
Query: 122 GNFDGCLNVYEEMK-AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
+ + MK + P++I Y+ LL GR K+ + ++EM D L P+
Sbjct: 250 QGWKEAQEFFAWMKLQLSYIPSVIVYSMLLKVYGRDKQIGLAEAAFQEMLDQKLDPDEVA 309
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
+++++ Y A ++ L++Y M +G+ S Y T+L +A ++ED+
Sbjct: 310 FSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLIHLNKAERLADAALLWEDL- 368
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
E+ + ++ MITI G+ EA +F ML AG+ P+ + ++ GK R
Sbjct: 369 VEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLGKLGRY 428
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
D+ V + + +L++ + K EL
Sbjct: 429 DEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELA 466
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 122/258 (47%), Gaps = 14/258 (5%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++ YN ++ R R + Y +T+ GL P+ TY +++ + ++ D ++
Sbjct: 860 HIVAYNTIIKADLRPGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMF 919
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+++K G Q +Y+ ++ A G + A ++FE MK +P +++++I +
Sbjct: 920 KDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMK-LRGLRPHEVSYNNLIDAYAR 978
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ ++AE + EM +AG P+ LI Y + ++ AL R+ I P R
Sbjct: 979 AGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRH 1038
Query: 322 CGCLLNVMTQT--PKEELGKLVECVEKSNSKLGYV-----VKLLLEEQDIEGDF----KK 370
++ ++ P++ + ++ +E+S + V +++LLE E K
Sbjct: 1039 YNEVMLAFSRARLPRQAMESYLK-MERSGIQPDVVSSRTMIRILLEGSMFEEGLSLYKKT 1097
Query: 371 EATELFNSISKD-VKKAY 387
EA + +S+S++ V K Y
Sbjct: 1098 EAKLVSDSLSREMVAKLY 1115
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S ++ Y +G ++ +++E MK G++P+ ++YNNL+D RA + + + +
Sbjct: 930 DEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLL 989
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G P+ T+ L+ AY + + M+ ++ +V YN ++ +
Sbjct: 990 VEMAKAGCPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRA 1049
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
+A E + M+ S QPD + +MI I
Sbjct: 1050 RLPRQAMESYLKMERS-GIQPDVVSSRTMIRI 1080
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/240 (18%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++T++ + A F+ +++ +M+ + + Y +++ G+A + + +++EM
Sbjct: 449 SYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEM 508
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ L + T++ + +A + + V E+ KG+ L + TLL G
Sbjct: 509 NELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLNLDDMAWKTLLHCYVKAGNV 568
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ A + F+ + E+ D ++ ++++ + + +A+ +F ++ + +P+ +
Sbjct: 569 ERATKTFKTL--VESGIADLMAYNDVLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGT 626
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
+++ Y A L ++ E G TPD G L+N + + EE L+E K +
Sbjct: 627 MVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKED 686
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 121/299 (40%), Gaps = 14/299 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++ ++ LY + +++++K+ ++P+ + + ++ A + +
Sbjct: 585 DLMAYNDVLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVL 644
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G +P+ T L+ AYG A E+ + ++ + + + + +C
Sbjct: 645 RQMREKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAI--SRIYLCLKF 702
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D+A + + E+ DS ++ + G+V AE + + M + GF+
Sbjct: 703 RLFDKATLLLH--RVLESFTLDSAAYNQLTINFLKAGQVLPAEMLHSRMQDKGFDVEDST 760
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
L LI YGKA R + + R LP G L+N EE LVE + +
Sbjct: 761 LGHLIAAYGKAGRYEVLTRLKPELPRNNFVYSS-MVGALINC---NQLEEAAGLVEKMRQ 816
Query: 347 SNSKLGYV-VKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENA 404
K V V +LL G+ K +F+ + YC D V N + A
Sbjct: 817 IGLKCDSVLVSILLNAYSKAGEQK-----IFSFSGRWYPAGYCCLQHDHIVAYNTIIKA 870
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 118/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ + N++TYN+++ G+
Sbjct: 179 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHE 238
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 239 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 298
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++KS +N D + I I + G++ EA +F + ++AG
Sbjct: 299 VAYERAGLVAHAKRLLHELKSPDNIPRD-----TAIHILAGAGRIEEATYVFRQAIDAGE 353
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 354 VKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLN 400
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 114 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 173
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K + +V YN+++ +
Sbjct: 174 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 233
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 234 TLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQV 292
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 293 LYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD 326
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 10 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 69
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 70 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN 129
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 130 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 188
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 189 YNTLLRVYGDAE 200
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 45 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 104
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 105 SEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 164
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + T
Sbjct: 165 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIVQNVVT 223
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 224 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 283
Query: 312 ELGITPD 318
G+ D
Sbjct: 284 SSGVEID 290
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 60
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 61 DYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 119
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 120 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 163
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + AG + V+ + G ++ + ++ + K+ V ++ +M
Sbjct: 327 TAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGL 386
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
G P+ N A +L AYG+ + VY EM+E G
Sbjct: 387 GYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVG 422
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 153/324 (47%), Gaps = 12/324 (3%)
Query: 65 YPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG 122
+P + +S + + + L EK++ + R R+ P+ F+T+I G
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR---RVSPDIYTFNTVISGLCRIG 205
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWN 179
+V +++KA G+ P++ TYN+L+D G A + V + KEM + G+SP
Sbjct: 206 QLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAV 265
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
T+ L+ Y + + V+ EMK++G+ SV YN+L++ G +E ++ E+M
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ P+ TF ++ +G +++A + M E EP++ + T LI Y + +
Sbjct: 326 EDL-GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGK 384
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELGKLVECVEKSNSKLGYVVKL 357
+D + + + GI+P+ CL+ +++ + G L E EK +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 358 LLEEQDIEGDFKKEATELFNSISK 381
L+ +G+ +K A +L + +S+
Sbjct: 445 LIGALCCKGEVRK-AVKLLDEMSE 467
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 38/226 (16%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P A F LI Y N + V+EEMK G+ +++TYN+L+ + + +
Sbjct: 260 ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGV 319
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---------------------------------GR 190
+ +EM D GLSPN T+ +L+ + G
Sbjct: 320 KLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGY 379
Query: 191 ARYG--EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
R G ED ++V M +KG+ +VT YN L+ + G A + ++MK + + D
Sbjct: 380 RRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEAD 438
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
T++ +I C+G+V +A + +EM E G EPN ++IQ +
Sbjct: 439 VVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 25/232 (10%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ ++ LI Y G + + V E M G+ PN+ TYN L+ R+
Sbjct: 365 VEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM + G+ + TY L+ A + + EM E G++ + YNT++
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Query: 224 ADVGYTDEAFEIFEDMKSSENCQ--PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
D G A+EI M E C+ + T++ I GK+ EA + NEML+
Sbjct: 485 CDKGNIKSAYEIRTRM---EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLV 541
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
PN ++ + + E G TPD R GC ++ ++ P
Sbjct: 542 PNGITYETIKE----------------GMMEKGYTPDIR--GCTVSQASENP 575
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 88 SKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
++ EK+ + R + E+ R + + +I +YG A L V+ EMK++G KPN+ T
Sbjct: 255 ARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICT 314
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L++ R + + +++EM G P+ Y +L+ AY RA + ++ M+
Sbjct: 315 YTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLME 374
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
G + YN L+ G EA F+++K + +P + +++ + G V
Sbjct: 375 HMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELK-QQGMRPTMKSHMLLLSAHARSGNV 433
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+ E + ++ ++G P+ F L +++ YG+A R DD+ R
Sbjct: 434 ARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMER 473
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ VY+ MK + N TY +++ G+A +P +++EM G PN TY +L+ A
Sbjct: 262 VEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNA 321
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R E V+ EM++ G + V YN L+ + G A EIF M+ C+P
Sbjct: 322 FAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM-GCEP 380
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D +++ ++ G EAEA F E+ + G P + L+ + ++ +
Sbjct: 381 DRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVM 440
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNS 349
+L + G+ PD +LN + + +++ +L +E+ +
Sbjct: 441 AQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDG 483
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L++ Y +G V EM+ G+ P YN LD + +A+ + +Y+
Sbjct: 208 DTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQR 267
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M N TY ++ YG+A +L V+REMK G + ++ Y L+ A G
Sbjct: 268 MKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGL 327
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+FE+M+ + + +PD + +++++ S G A +F+ M G EP+
Sbjct: 328 CEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYN 386
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ +G+A + A L + G+ P
Sbjct: 387 ILVDAFGRAGLHQEAEAAFQELKQQGMRP 415
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R +R D ++ LI YG Y + P TY LL + +
Sbjct: 164 RRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQL 223
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + + EM NG+ P Y + L +AR E + VY+ MK++ + + Y +
Sbjct: 224 HRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLM 283
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + + +F +MKS C+P+ T+++++ + G +AE +F EM +AG
Sbjct: 284 INVYGKANQPMSSLRVFREMKSV-GCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 342
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EP+++ +L++ Y +A + + +G PD
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPD 381
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 106/249 (42%), Gaps = 4/249 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++ L++ Y AG G ++ M+ +G +P+ +YN L+D GRA + + +
Sbjct: 346 DVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAF 405
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+E+ G+ P ++ LL A+ R+ V ++ + G++ N +L
Sbjct: 406 QELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRA 465
Query: 227 GYTDEAFEIFEDMKSSENCQ---PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G D+ +F M+ + PD+ T++ ++ G + EA F + G +
Sbjct: 466 GRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAAD 525
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
+ TS I Y + + +R + + G PD LL + + E++ +V
Sbjct: 526 VVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVR 585
Query: 343 CVEKSNSKL 351
+ K L
Sbjct: 586 SMHKDAKTL 594
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK----AIGVKPNMITYNNLLDTMGRAKRPW 160
R D A + ++ YG AG D ++ M+ A P+ TYN L++ GRA
Sbjct: 449 RPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLD 508
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+++ ++ + GL+ + T+ S + AY R + L V+ EM + G LL
Sbjct: 509 RMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLL 568
Query: 221 AMCADVGYTDEAFEIFEDM 239
A C+D ++ I M
Sbjct: 569 AACSDERQVEQVTAIVRSM 587
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 10/247 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R ++KE S + K R P+ F+TLI Y GNF L ++ EM G+ PN+
Sbjct: 285 REGQMKETS-EILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TY L+++M +A + +M D GL PN TY +L+ + + + + + +E
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M E G ++ YN L+ +G ++A + ++M PD ++S++I+ CR
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEM-IERGFIPDVVSYSTIIS-GFCRN 461
Query: 264 KVSEAEAMFN---EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ E E F EM+ G P++ +SLIQ K +R +V + LG+ PD+
Sbjct: 462 Q--ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519
Query: 321 FCGCLLN 327
L+N
Sbjct: 520 TYTSLIN 526
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI+ + TAGN + L + EM+ G PN++TYN ++D + ++ +
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAF 258
Query: 164 TIYKEMTDNGLSPNWNTY----------------ASLLRAYGRARYGED----------- 196
+ + M GL+PN +Y + +L + RY D
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGY 318
Query: 197 --------TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
L ++ EM + G+ +V Y TL+ G + A E + M+ P+
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR-DRGLHPN 377
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T++++I S +G + +A + EM+E GF P + +LI + R +D L
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437
Query: 309 RLPELGITPD 318
+ E G PD
Sbjct: 438 EMIERGFIPD 447
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV-KTIYKE 168
F ++K + L++ K+ G P +++YN +LD + R K+ ++ + I+KE
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M ++G+SPN TY L+R + A E L + EM+ G +V YNT++ +
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 229 TDEAF-----------------------------------EIFEDMKSSENCQPDSWTFS 253
EAF EI E+M S PD TF+
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM-SKRRYVPDRVTFN 312
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I G +A + EM++ G PN+ T+LI KA + + L+++ +
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372
Query: 314 GITPDDRFCGCLLNVMTQ 331
G+ P+ R L++ +Q
Sbjct: 373 GLHPNGRTYTTLIDGFSQ 390
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 17/257 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I + + + EM A G+ P++ TY++L+ + + +R +V ++
Sbjct: 447 DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF 506
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM GL P+ TY SL+ AY + L ++ EM +KG + YN L+
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGKVSEAEAM 271
T EA + + E+ P+ T++++I C+ +G ++EA+ +
Sbjct: 567 SRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRV 625
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
ML+ G++ N V +I + K + + G P L +
Sbjct: 626 LESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYH 685
Query: 332 TPKE-ELGKLVECVEKS 347
KE EL +L++ KS
Sbjct: 686 EGKEVELNQLLDYTLKS 702
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 36/200 (18%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI + G + + +EM G P++++Y+ ++ R + + + EM
Sbjct: 416 YNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+SP+ TY+SL++ + R + +++EM G+
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL--------------------- 514
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
PD T++S+I G + +A + +EM++ GF P++ L
Sbjct: 515 ---------------PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVL 559
Query: 291 IQCYGKAQRTDDVVRALNRL 310
I + K RT + R L +L
Sbjct: 560 INGFNKQSRTKEAKRLLLKL 579
>gi|255579214|ref|XP_002530453.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529998|gb|EEF31923.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 391
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 112/221 (50%), Gaps = 4/221 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +++ + G + C +EEM GV ++ +Y+ +D + + +PW+ +YKEM
Sbjct: 140 YNMILRGWFKMGWWSKCREFWEEMDQKGVHKDLHSYSIYMDIVCKGGKPWKAVKLYKEMK 199
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ + +Y ++RA G + + + VYREMKE G +V YNT++ + + G
Sbjct: 200 RKGMKLDVVSYNIVVRAVGLSEGVDFAMRVYREMKELGCMPNVVTYNTIIKLLCETGRVK 259
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+++ +DM+ + D T+ C K E +F+ M+E+G +P + L
Sbjct: 260 EAYKMLDDMR-KKGIVADVITYHCFF---RCLEKPKEILWLFDRMIESGVQPRMDTYVML 315
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++ +G+ V+ ++ E G +PD+ L++ + Q
Sbjct: 316 MRKFGRWGFLRPVLLVWKKMEEQGCSPDEFAYNALIDALVQ 356
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D +++ +++ G + D + VY EMK +G PN++TYN ++ + R +
Sbjct: 204 KLDVVSYNIVVRAVGLSEGVDFAMRVYREMKELGCMPNVVTYNTIIKLLCETGRVKEAYK 263
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +M G+ + TY R + + + L ++ M E G+Q + Y L+
Sbjct: 264 MLDDMRKKGIVADVITYHCFFRCLEKPK---EILWLFDRMIESGVQPRMDTYVMLMRKFG 320
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G+ +++ M+ + C PD + ++++I +G + A EML G
Sbjct: 321 RWGFLRPVLLVWKKME-EQGCSPDEFAYNALIDALVQKGMLHMARRYEEEMLAKGL 375
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF IK + AG + V+E M+ G + ++N LL + + + ++
Sbjct: 273 DAFKIAIKSFAAAGEIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDR 332
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D +P+ +Y +L+ A+ AR + V+ +M EKGM+ V ++NT++
Sbjct: 333 MRDQ-YTPDLRSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQR 391
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
EA ++FE MK+ + P+ WT++ +I +GK+ A F EM AG +P + T
Sbjct: 392 RPEAVKMFELMKA-KGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYT 450
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
L+ YG A+R D V L + + G PD R L+ ++T
Sbjct: 451 CLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLT 492
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 113/249 (45%), Gaps = 4/249 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+++ D +++ L+ + A N V+ +M G+KP+++ +N ++D + R +R +
Sbjct: 335 DQYTPDLRSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPE 394
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+++ M G PN TY L+R + + + + + EM+ G Q V Y LL
Sbjct: 395 AVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLV 454
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ D + E+M + + C PD T++++I + + R +A ++ +M+ G E
Sbjct: 455 GYGNAKRMDRVTAMLEEM-AQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLE 513
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRAL-NRLPELGITPDDRFCGCLLN--VMTQTPKEELG 338
P + +++ Y R + A+ + GI PD +N + P E
Sbjct: 514 PTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACK 573
Query: 339 KLVECVEKS 347
L E ++K
Sbjct: 574 FLEEMIQKG 582
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI+ + G D + +EEM+ G +P + TY LL G AKR +V +
Sbjct: 409 PNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAM 468
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM G P+ TY +L++ +D + +Y++M KG++ ++ YN ++
Sbjct: 469 LEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMK-SYF 527
Query: 226 VGYTDEAF--EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G + A ++E+M C PD +++ I G+ +EA EM++ G +
Sbjct: 528 LGGRNYAMGCAVWEEMHRKGIC-PDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAP 586
Query: 284 LFVLTSLIQCYGKAQRTD 301
+ KA + D
Sbjct: 587 QIDYNKFAADFSKAGKPD 604
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D ++ LIKL D + +Y++M G++P + TYN ++ + R + + +
Sbjct: 480 DGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAV 539
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G+ P+ N+Y + + R + EM +KGM+ YN A +
Sbjct: 540 WEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSK 599
Query: 226 VGYTDEAFEIFEDMK 240
G D +E+ + +K
Sbjct: 600 AGKPDILYELAQKVK 614
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 38/174 (21%)
Query: 180 TYASLLRAYGRARYGE----------------------------------DTLSVYREMK 205
TY +L G+AR E + + V+ M+
Sbjct: 240 TYCKMLHILGKARQFETMVALVQEMGKAGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMR 299
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS-MITICSCRGK 264
G V +N LL A G EA +F+ M+ + PD ++++ M+ C+ R
Sbjct: 300 VHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMR--DQYTPDLRSYTALMLAWCNARNL 357
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V EA ++N+MLE G +P++ V ++I + QR + V+ + G P+
Sbjct: 358 V-EAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPN 410
>gi|299116347|emb|CBN76149.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + + D ++++ I AGN + L + M+A V P++I +D + +
Sbjct: 646 RRKGLKPDRYSYTSAIHACSKAGNPEEALRLLRAMEASNVVPDVIAMTACMDALAAGGKW 705
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ TI EM G++PN TY + ++A GR + L + ++ + +V YN
Sbjct: 706 SEAITILDEMRSKGVTPNERTYKAAIQACGRGGQWQRALELLSRLENRASGATVQEYNCA 765
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE---NCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+ C G + A + E MK+++ N PD T++S I CS GK A ++ +EM
Sbjct: 766 MMACVTGGESGRALALLEQMKANKGGVNAGPDMVTYTSAIMACSSTGKWDRALSLLDEMR 825
Query: 277 EAG--FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EAG +PN+ T+ I G+A++ ++ V ++L E G++PD
Sbjct: 826 EAGPRTQPNIRSYTAAIAACGRARKWEEAVALHSKLLEEGMSPD 869
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM------------ 153
+D ++F ++ AG + L+V EM GV P + +N +L
Sbjct: 491 LDHSSFMAVLSACSKAGRWGSALSVLREMDRAGVTPETVAFNTVLAAFEHRAHSGGSSSG 550
Query: 154 -GRAKRP---WQVK-TIYKEMTDNGLSPNWNTYASLLRAYGRARYG---EDTLSVYREMK 205
G AKR W + + +M G+ P+ TY SL+ R+G + L + M
Sbjct: 551 GGAAKREAPRWPMALELLADMERRGVEPDVVTYNSLINVL---RWGGQRDRALEILDGMN 607
Query: 206 EKG----MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
KG ++ V YN+ +A CA G + +A ++ +M+ + +PD ++++S I CS
Sbjct: 608 AKGGAGGVRPDVITYNSAIAACASGGESKKASQLIGEMRR-KGLKPDRYSYTSAIHACSK 666
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
G EA + M + P++ +T+ + + + + L+ + G+TP++R
Sbjct: 667 AGNPEEALRLLRAMEASNVVPDVIAMTACMDALAAGGKWSEAITILDEMRSKGVTPNER 725
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG----VKPNMITYNNLLDTMGR 155
E+ ++P+ +++LI + G D L + + M A G V+P++ITYN+ +
Sbjct: 572 ERRGVEPDVVTYNSLINVLRWGGQRDRALEILDGMNAKGGAGGVRPDVITYNSAIAACAS 631
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ + EM GL P+ +Y S + A +A E+ L + R M+ + V
Sbjct: 632 GGESKKASQLIGEMRRKGLKPDRYSYTSAIHACSKAGNPEEALRLLRAMEASNVVPDVIA 691
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ A G EA I ++M+ S+ P+ T+ + I C G+
Sbjct: 692 MTACMDALAAGGKWSEAITILDEMR-SKGVTPNERTYKAAIQACGRGGQ 739
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIG--VKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+++ I + G +D L++ +EM+ G +PN+ +Y + GRA++ + ++ +
Sbjct: 801 YTSAIMACSSTGKWDRALSLLDEMREAGPRTQPNIRSYTAAIAACGRARKWEEAVALHSK 860
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ + G+SP+ ++ +++RA R + ++ + M E G+ L++ +D G
Sbjct: 861 LLEEGMSPDPASFNAVIRAARRGGQHKLSMKLLASMVEAGLTPDGVTVGELISSLSDRGR 920
Query: 229 TDEAFEIFE 237
D+A + E
Sbjct: 921 WDDAQRVVE 929
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 10/247 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R ++KE S + K R P+ F+TLI Y GNF L ++ EM G+ PN+
Sbjct: 285 REGQMKETS-EILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TY L+++M +A + +M D GL PN TY +L+ + + + + + +E
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKE 403
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M E G ++ YN L+ +G ++A + ++M PD ++S++I+ CR
Sbjct: 404 MVENGFTPTIITYNALINGHCILGRMEDASGLLQEM-IERGFIPDVVSYSTIIS-GFCRN 461
Query: 264 KVSEAEAMFN---EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ E E F EM+ G P++ +SLIQ K +R +V + LG+ PD+
Sbjct: 462 Q--ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519
Query: 321 FCGCLLN 327
L+N
Sbjct: 520 TYTSLIN 526
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI+ + TAGN + L + EM+ G PN++TYN ++D + ++ +
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAF 258
Query: 164 TIYKEMTDNGLSPNWNTY----------------ASLLRAYGRARYGED----------- 196
+ + M GL+PN +Y + +L + RY D
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGY 318
Query: 197 --------TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
L ++ EM + G+ +V Y TL+ G + A E + M+ P+
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR-DRGLHPN 377
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T++++I S +G + +A + EM+E GF P + +LI + R +D L
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437
Query: 309 RLPELGITPD 318
+ E G PD
Sbjct: 438 EMIERGFIPD 447
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV-KTIYKE 168
F ++K + L++ K+ G P +++YN +LD + R K+ ++ + I+KE
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M ++G+SPN TY L+R + A E L + EM+ G +V YNT++ +
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 229 TDEAF-----------------------------------EIFEDMKSSENCQPDSWTFS 253
EAF EI E+M S PD TF+
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM-SKRRYVPDRVTFN 312
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I G +A + EM++ G PN+ T+LI KA + + L+++ +
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372
Query: 314 GITPDDRFCGCLLNVMTQ 331
G+ P+ R L++ +Q
Sbjct: 373 GLHPNGRTYTTLIDGFSQ 390
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 17/257 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I + + + EM A G+ P++ TY++L+ + + +R +V ++
Sbjct: 447 DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF 506
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM GL P+ TY SL+ AY + L ++ EM +KG + YN L+
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGKVSEAEAM 271
T EA + + E+ P+ T++++I C+ +G ++EA+ +
Sbjct: 567 SRTKEAKRLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRV 625
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
ML+ G++ N V +I + K + + G P L +
Sbjct: 626 LESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYH 685
Query: 332 TPKE-ELGKLVECVEKS 347
KE EL +L++ KS
Sbjct: 686 EGKEVELNQLLDYTLKS 702
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 36/200 (18%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI + G + + +EM G P++++Y+ ++ R + + + EM
Sbjct: 416 YNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+SP+ TY+SL++ + R + +++EM G+
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL--------------------- 514
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
PD T++S+I G + +A + +EM++ GF P++ L
Sbjct: 515 ---------------PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVL 559
Query: 291 IQCYGKAQRTDDVVRALNRL 310
I + K RT + R L +L
Sbjct: 560 INGFNKQSRTKEAKRLLLKL 579
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 144/306 (47%), Gaps = 18/306 (5%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI G F+ + VY +M A G+ P +TY+ L++ + R TI
Sbjct: 340 PNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTI 399
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M + PN TY +++ + Y + +++ +M + G +V YN ++ +
Sbjct: 400 FEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFK 459
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
GY + A + E MK + + D+WT++++I+ S GK+ A ++FNEM+E G PN+
Sbjct: 460 QGYMNNAMRLLEMMKGN-GLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVV 518
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LGKL 340
++I Y + DD + ++ E G P +++ ++T + GK+
Sbjct: 519 TYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNL 400
V K G + ++ I+G K T L I ++KK + +LC +L
Sbjct: 579 V--------KQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKR--DYFPNLCTYSSL 628
Query: 401 LENACK 406
++ C+
Sbjct: 629 IDGLCQ 634
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 94 SYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+++ R K DPN+ +S LI + G + +++ EEM G++P + Y +
Sbjct: 256 AFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIV 315
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
++ A R + + +M G PN TY +L+ R E + VY +M G+
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ Y+ L+ G + A IFE M S ++ P++ T++ +I G + +A A+
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSL-PNTETYNVIIKGFCSIGYIQKATAI 434
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F++ML+AG PN+ +I Y K ++ +R L + G+ D
Sbjct: 435 FDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLD 481
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D ++ LI + G + +++ EM G+ PN++TYN +++ +
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALA 538
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M ++G P+ TY ++ + + + + +M ++G+ +V Y + +
Sbjct: 539 LFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G T AF+IF +MK + P+ T+SS+I G+ +AE +L+ G EPN+
Sbjct: 599 KNGRTSLAFKIFHEMKKRDYF-PNLCTYSSLIDGLCQEGQAEDAE----RLLDDGCEPNV 653
Query: 285 FVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
T+L++ G+ D +V ++ + G+ P + LL
Sbjct: 654 DTYTTLVRGLCGKGRCYEADQLVESMKK---KGLQPSEEIYRALL 695
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 38/230 (16%)
Query: 110 AFSTLIKLYGTAGNFDGC-LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+FSTL+ G + DG +VY EM G++PN+ T+N ++ + + + + I
Sbjct: 169 SFSTLLIQLGKF-DMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGH 227
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ G P+ TY SL+ + C + G
Sbjct: 228 IFHYGACPDTFTYTSLI----------------------------------IGHCKN-GN 252
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D AFE+F+ M + C P+S T+S++I G++ EA M EM++ G EP + T
Sbjct: 253 LDLAFEMFDRM-VKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
I A R+ + V+ L ++ + G P+ + L++ +++ K E+
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVA 361
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 108/277 (38%), Gaps = 67/277 (24%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ +I +Y G + + + E MK G+K + TY NL+ R + ++
Sbjct: 445 PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSL 504
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA---- 221
+ EM ++G+SPN TY +++ Y +D L+++ +M E G S YN +++
Sbjct: 505 FNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSK 564
Query: 222 ---------MCADV----------------------GYTDEAFEIFEDMKS--------- 241
C + G T AF+IF +MK
Sbjct: 565 TNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCT 624
Query: 242 ---------------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ C+P+ T+++++ +G+ EA+ + M + G
Sbjct: 625 YSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGL 684
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+P+ + +L+ K + ++ + + G P
Sbjct: 685 QPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQP 721
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G +PN+ TY L+ + R ++ + + M GL P+ Y +LL + E
Sbjct: 648 GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESA 707
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWT 251
L ++ M G Q ++ Y L+ + +A +F+ M K N WT
Sbjct: 708 LKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWT 762
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF IK + AG + V+E M+ G + ++N LL + + + ++
Sbjct: 256 DAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDR 315
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D +P+ +Y +L+ A+ AR + V+ EM E G++ V ++NT++
Sbjct: 316 MRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQR 374
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
EA ++FE MK+ + P+ WT++ +I RGK+ A F EM + G +P++ T
Sbjct: 375 RPEAVKMFELMKA-KGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYT 433
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
L+ YG A+R D V L + + G PD R L+ ++T
Sbjct: 434 CLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLT 475
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+++ D +++ L+ + A N V+ EM G+KP+++ +N +++ + R +R +
Sbjct: 318 DRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPE 377
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+++ M G +PN TY L+R + + + + + EM++ G Q V Y LL
Sbjct: 378 AVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLV 437
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ D + E+M + + C PD T++++I + + R +A ++ +M++ G E
Sbjct: 438 GYGNAKRMDRVTALLEEM-TQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLE 496
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRAL-NRLPELGITPDDRFCGCLLN--VMTQTPKEELG 338
P + +++ Y R + A+ + GI PD +N + P+E
Sbjct: 497 PTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACK 556
Query: 339 KLVECVEKS 347
+ E ++K
Sbjct: 557 YIEEMIQKG 565
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 6/198 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI+ + G D + +EEM+ +G +P++ TY LL G AKR +V +
Sbjct: 392 PNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTAL 451
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA--MC 223
+EMT G P+ TY +L++ +D +Y++M +KG++ ++ YN ++
Sbjct: 452 LEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFL 511
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
Y ++E+M C PD +++ I G+ EA EM++ G +
Sbjct: 512 GGRNYM-MGCAVWEEMHRKGIC-PDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTP 569
Query: 284 LFVLTSLIQCYGKAQRTD 301
+ KA + D
Sbjct: 570 QIDYNKFAADFSKAGKPD 587
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D ++ LIKL D +Y++M G++P + TYN ++ + R + + +
Sbjct: 463 DGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAV 522
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G+ P+ N+Y + + R E+ EM +KGM+ YN A +
Sbjct: 523 WEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSK 582
Query: 226 VGYTDEAFEIFEDMK 240
G D +E+ + +K
Sbjct: 583 AGKPDILYELAQKVK 597
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 172 NGLSPNWNTYASLLRAYGRARY--------------------------------GE--DT 197
G + TY ++ G+AR GE +
Sbjct: 215 GGFAHTTITYCKMVHILGKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNA 274
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS-MI 256
+ V+ M+ G V +N LL A G EA ++F+ M+ + PD ++++ M+
Sbjct: 275 VGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMR--DRYAPDLRSYTALML 332
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
C+ R V EA ++NEMLE G +P++ V ++I+ + QR + V+ + G
Sbjct: 333 AWCNARNLV-EAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPA 391
Query: 317 PD 318
P+
Sbjct: 392 PN 393
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+++I Y AG + + VY +M A G+ PN +TYN L++ G+ +
Sbjct: 323 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 382
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y++MT P+ T++SL+ Y R +D L ++ +M + +Q +V ++ ++
Sbjct: 383 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 442
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+DEA + ++ + P ++ ++ +I +C C GKV EA + M E G P+
Sbjct: 443 QNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKC-GKVDEANLIRKGMEEKGCRPDK 501
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ T LI Y R + + + + E G +PD C ++ + +
Sbjct: 502 YTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 549
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 91/239 (38%), Gaps = 9/239 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM- 153
+D + + D S L+ A D + + G + YN L+ ++
Sbjct: 170 FDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLI 229
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
GR + V + + D SP+ ++ +++ R + L + M E G
Sbjct: 230 GRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDT 289
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+N ++ E+ ++ C P+ TF+S+I+ GK+ +A A++N
Sbjct: 290 VTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 349
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCGC 324
+M+ +G PN LI YGK V ++ L PD D +C C
Sbjct: 350 DMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRC 408
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Cucumis sativus]
Length = 1062
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D AF+T IK G +YE M A+G+ P++ TYN ++ GR ++ + +
Sbjct: 771 LDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEM 830
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +GLSP+ Y +L+ YG+A + +++EM E+G++ + YN ++ + A+
Sbjct: 831 FNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYAN 890
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +E + + M+ + PDS+T+ S+I + K SEAE + N M E G
Sbjct: 891 AGLHEETENLLKAME-QDAIVPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCA 949
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ KA R + L G++PD
Sbjct: 950 HYDLLLSALAKAGMIRKAERVYDELQTAGLSPD 982
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 149/308 (48%), Gaps = 18/308 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A T++ Y G+ L+ Y +K G+ P + +N +L ++ + +VK ++
Sbjct: 223 DEVACGTMLCTYARWGHHKTMLSFYSAVKDRGIVPPIAVFNFMLSSLQKKGLHAKVKELW 282
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + G++ + TY ++ + + + E+ V+ EMK G YN L+++
Sbjct: 283 MQMVEIGVTFSDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFIPEEVTYNLLISLSIKR 342
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+DE +++DM+ ++ P ++T SS++T+ G S+A ++F+EM + +
Sbjct: 343 ENSDEVLRLYKDMR-DKDIVPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVI 401
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
LI+ YGK +D + + +LG+ D++ + V + E+ ++E ++
Sbjct: 402 YGLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMK 461
Query: 346 KSN---SKLGYVVKL--LLEEQDIEGDFKKEATELFNSISK----DVKKAYCNCLIDLCV 396
N S+ Y+V L + ++DI + A F ++SK D + C +++L +
Sbjct: 462 SRNIWLSRFAYIVSLQCYVMKEDI-----RSAESTFQALSKTGLPDARS--CIYILNLYL 514
Query: 397 NLNLLENA 404
L+L+ A
Sbjct: 515 KLDLVNKA 522
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
AR+ D A++ LI YG AG +++EM GVKP M++YN +++ A
Sbjct: 834 ARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGL 893
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + + K M + + P+ TY SL+RAY ++ + + M+EKG+ + Y+
Sbjct: 894 HEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCAHYDL 953
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
LL+ A G +A ++++++++ PD +++ G V E F +
Sbjct: 954 LLSALAKAGMIRKAERVYDELQTA-GLSPDVTCNRTLMRGYLDYGYVREGIKFFESTCK- 1011
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ + F++++ + Y + D+ + L+ + LG++
Sbjct: 1012 -YAGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGLS 1048
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 15/249 (6%)
Query: 71 GSSPKSYIWVNPKSPRAS----KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDG 126
GS +YI + K+ AS +L EK YD A A S ++ G
Sbjct: 707 GSMIDAYIKCD-KAEEASTLYKELIEKGYDLGAV---------AVSRIVNTLTVGGKHRV 756
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
NV G++ + + +N + M + IY+ M G+ P+ TY +++
Sbjct: 757 AENVVRASLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMIS 816
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
YGR R + + ++ + G+ Y L++ G T EA +F++M E +
Sbjct: 817 VYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEM-LEEGVK 875
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P +++ M+ + + G E E + M + P+ F SLI+ Y ++ + + +
Sbjct: 876 PGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAEKI 935
Query: 307 LNRLPELGI 315
+N + E GI
Sbjct: 936 INSMQEKGI 944
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 12/247 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK-PNMITYNNLLDTMGRAKRPWQVK 163
R+D ++LI LYG + V + A+ + + + +++D + + +
Sbjct: 667 RLDDAIIASLISLYGKERKINQAAEV---LAAVANSCTSTLIFGSMIDAYIKCDKAEEAS 723
Query: 164 TIYKEMTDNGLSPNWNTYASL---LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
T+YKE+ + G + + L G+ R E+ V R G++L +NT +
Sbjct: 724 TLYKELIEKGYDLGAVAVSRIVNTLTVGGKHRVAEN---VVRASLNCGLELDTVAFNTFI 780
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G A I+E M + P T+++MI++ K+ +A MFN +G
Sbjct: 781 KAMLEGGKLHFASRIYEHMIAL-GIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGL 839
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP-KEELGK 339
P+ T+LI CYGKA +T + + E G+ P ++NV EE
Sbjct: 840 SPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEN 899
Query: 340 LVECVEK 346
L++ +E+
Sbjct: 900 LLKAMEQ 906
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 129 NVYEEMK-AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+V++ MK + +P++I Y +L G+ + + + EM + GL P+ ++L
Sbjct: 174 DVFDWMKLQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCT 233
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y R + + LS Y +K++G+ + ++N +L+ G + E++ M
Sbjct: 234 YARWGHHKTMLSFYSAVKDRGIVPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFS 293
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D +T++ +I G EA +FNEM GF P LI K + +D+V+R
Sbjct: 294 D-FTYTVVINSLVKEGHSEEAFKVFNEMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLY 352
Query: 308 NRLPELGITPDDRFCGCLLNV 328
+ + I P + C LL +
Sbjct: 353 KDMRDKDIVPSNYTCSSLLTL 373
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 7/227 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F ++I Y + +Y+E+ G + + +++T+ + + + +
Sbjct: 706 FGSMIDAYIKCDKAEEASTLYKELIEKGYDLGAVAVSRIVNTLTVGGKHRVAENVVRASL 765
Query: 171 DNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
+ GL + +NT+ + G+ + +Y M G+ S+ YNT++++
Sbjct: 766 NCGLELDTVAFNTFIKAMLEGGKLHFAS---RIYEHMIALGIVPSIQTYNTMISVYGRGR 822
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D+A E+F +SS PD ++++I+ GK EA +F EMLE G +P +
Sbjct: 823 KLDKAVEMFNAARSS-GLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSY 881
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
++ Y A ++ L + + I PD L+ TQ+ K
Sbjct: 882 NIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCK 928
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K R+ P+ AF +I+ Y AG+ L+ + M+ G P ++TYN L+ + R +
Sbjct: 540 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 599
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M+ G++PN +TY ++R Y + + ++KE G++L V +Y TL
Sbjct: 600 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 659
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L C G A + +M S + +++ ++ +I + RG V EAE + +M E G
Sbjct: 660 LRACCKSGRMQSALAVTREM-SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 718
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ TS I KA + + + ++G+ P+
Sbjct: 719 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 757
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + +++ Y N + CL V+E +K G KP++I+Y LL+ + + + +I KE
Sbjct: 409 DVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKE 468
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY+ L+ + + +++ EM G+Q +YN L+ +G
Sbjct: 469 MESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGN 528
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A I E M+ E QP + F +I + G + A + M +G P +
Sbjct: 529 MDRAICILEKMQ-KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYN 587
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + + V L+++ GITP++
Sbjct: 588 ALIHGLVRKHKVQRAVSVLDKMSIAGITPNE 618
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 115/237 (48%), Gaps = 12/237 (5%)
Query: 95 YDTRARNEKWR---IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+ RA E R I+PNAF ++L+ Y A + G L+ EEMK+ G++ ++TY+ L
Sbjct: 314 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSIL 373
Query: 150 LDTMGRAKRPWQ------VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ + Q + + +EM ++G+ + Y S++ Y + L V+
Sbjct: 374 ISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFER 433
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+KE G + S+ Y LL + +G +A I ++M+S + ++ T+S +I
Sbjct: 434 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESC-GIKHNNKTYSMLINGFIHLH 492
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ A A+F EML +G +P+ + LI+ + K D + L ++ + + P +R
Sbjct: 493 DFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNR 549
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y T+ + ++D + TL++ +G L V EM + N YN L+D
Sbjct: 640 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWA 699
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R W+ + + K+M ++G+ PN +TY S + A +A + V EM + G++ +V
Sbjct: 700 RRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVK 759
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
Y TL+ A V D A + FE+MK + +PD ++ ++T R V E
Sbjct: 760 TYTTLIKGWARVSLPDRALKCFEEMKLA-GLKPDEASYHCLVTSLLSRATVMEG 812
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 138/356 (38%), Gaps = 57/356 (16%)
Query: 79 WVN------PKSP----RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGT-AGNFDGC 127
WVN P+SP R +E +R + W+ +AF + KL G + F C
Sbjct: 214 WVNDGRRREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPKLSGVVSAYFPLC 273
Query: 128 ---LNVYEE-----MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
L+V + K + +P+ + ++ + + ++ M G+ PN
Sbjct: 274 KQSLDVLDLTYPFLFKKLLHEPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAF 333
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
+ SL+ AY AR LS EMK +G++L++ Y+ L++ A + + ++
Sbjct: 334 VFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQS------- 386
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
G + AE + EM E G + + V S++ Y Q
Sbjct: 387 -----------------------GNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQN 423
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE----ELGKLVEC--VEKSNSKLGY 353
+ + RL E G P GCLLN+ + K + K +E ++ +N
Sbjct: 424 ENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSM 483
Query: 354 VVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
++ + D F L + + D +A N LI+ + ++ A +LE
Sbjct: 484 LINGFIHLHDFANAFAIFEEMLRSGLQPD--RAIYNLLIEAFCKMGNMDRAICILE 537
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 128/251 (50%), Gaps = 15/251 (5%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
E M+++GV P ++TYN L+D + ++ + I +EMT G PN TY + L +G
Sbjct: 69 ETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFL--HGLC 126
Query: 192 RYG--EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+YG +D L+++R M EK ++L V Y TL+ G EA+ + ++M++S C P
Sbjct: 127 KYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS-GCVPKP 185
Query: 250 WTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
++++++ C+G +++EA +F M +G P+ ++ Y + R DD + L
Sbjct: 186 GCYNAILSWL-CKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQ 244
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVECVEKSNSKLGYVVKLLLEEQD--- 363
++ G+ P + L++ + + + E L E + + S L+ ++Q
Sbjct: 245 QMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMRKQQTDDS 304
Query: 364 ---IEGDFKKE 371
+E D++KE
Sbjct: 305 NLVVELDYRKE 315
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 98 RARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
RA EK R+D ++TLI AG ++ +EM+ G P YN +L + +
Sbjct: 139 RAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKG 198
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + ++K MT +G+ P+W T+ ++ Y R +D L + ++MK G+ +Y
Sbjct: 199 SRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIY 258
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
NTL+ G EA+ + ++M S P+S T++ M
Sbjct: 259 NTLIDALNRAGRVSEAYRLLQEM-ISRGLSPNSRTYALM 296
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 78/184 (42%), Gaps = 1/184 (0%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M G P ++T+ L+D + +A R + + M + G PN + ++ A +
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ M+ G+ ++ YN L+ A EI ++M + +P+ T++
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEM-TGRGHEPNHVTYN 119
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ + GKV +A A+F M E +++ T+LI +A + + L+ +
Sbjct: 120 TFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS 179
Query: 314 GITP 317
G P
Sbjct: 180 GCVP 183
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 3/151 (1%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVG 227
M + G P T+ L+ +A D + M E+G + ++N ++ A+C + G
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKE-G 59
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+ EA+ E M+S P T++ +I K+ A + EM G EPN
Sbjct: 60 RSAEAYGYIETMRSM-GVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTY 118
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + K + DD + + E I D
Sbjct: 119 NTFLHGLCKYGKVDDALALFRAMTEKKIRLD 149
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI Y GN N+++EM + G++P ++TY +L+ + + R ++
Sbjct: 410 DSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLF 469
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+++ G SP+ + +L+ + + ++ +EM ++ + YNTL+
Sbjct: 470 EKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCRE 529
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA E+ ++MK +PD +++++I+ S RG +++A + +EML GF P L
Sbjct: 530 GKVEEARELLKEMK-RRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLT 588
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+LIQ K Q+ D L + GITPDD L+ E +GK+ + E
Sbjct: 589 YNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLI--------EGIGKVDDSSEA 640
Query: 347 SNS 349
S+S
Sbjct: 641 SDS 643
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 110/239 (46%), Gaps = 17/239 (7%)
Query: 95 YDTRARNEKWR----------IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPN 142
Y +R R E R ++P++++ +LI G + + E+MK IG+ P
Sbjct: 281 YCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPT 340
Query: 143 MITYNNLLDTMGRAKRPWQVKTI-YK-EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
+TYN L+D G + VK Y+ EM + P +TY L+ A ++ +
Sbjct: 341 AVTYNTLID--GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGM 398
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
++M + G+ YN L+ G +AF + ++M S+ QP T++S+I + S
Sbjct: 399 IKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM-ISKGIQPTLVTYTSLIYVLS 457
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
R ++ A+ +F +++ G P+L + +LI + D L + + I PD+
Sbjct: 458 KRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDE 516
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 6/252 (2%)
Query: 71 GSSPKSYIWVNPKSP--RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDG 126
G P SY + + S + KL+E S E + P A ++TLI Y G+
Sbjct: 301 GVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLL-PTAVTYNTLIDGYCNKGDLVK 359
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+EM + P + TYN L+ + + + + K+M D+G+ P+ TY L+
Sbjct: 360 AFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILIN 419
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
Y R + +++ EM KG+Q ++ Y +L+ + + A ++FE + E
Sbjct: 420 GYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKI-IREGAS 478
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD F+++I G + A A+ EM + P+ +L+Q + + ++
Sbjct: 479 PDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAREL 538
Query: 307 LNRLPELGITPD 318
L + GI PD
Sbjct: 539 LKEMKRRGIRPD 550
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 38/244 (15%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ +I + G + M+ +GVKPN++TYN ++ R + + M
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMK 298
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL---------- 220
+ G+ P+ TY SL+ + E+ + +MKE G+ + YNTL+
Sbjct: 299 NRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLV 358
Query: 221 ------------AMCADV-------------GYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
A+ V G DEA + +DM S PDS T++ +
Sbjct: 359 KAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS-GIVPDSITYNIL 417
Query: 256 IT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
I C C G +A + +EM+ G +P L TSLI K R ++ G
Sbjct: 418 INGYCRC-GNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREG 476
Query: 315 ITPD 318
+PD
Sbjct: 477 ASPD 480
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 158 RPWQVKTIYKEMT---DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R VK ++ E+ D + + + L+RA + G+D + MKEKG+ +
Sbjct: 143 RVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIE 202
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+N +L++ + T+ + ++ +M + + +TF+ MI + GK+ +A+
Sbjct: 203 TFNAMLSLFLKLNQTETVWVLYAEMFRLK-IKSTVYTFNIMINVLCKEGKLKKAKDFIGS 261
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M G +PN+ ++I Y R + L+ + G+ PD G L++ M + K
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGK 321
Query: 335 EE 336
E
Sbjct: 322 LE 323
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F LI+ D ++ MK GV P + T+N +L + + V +Y EM
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227
Query: 170 TDNGLSP---NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +N ++L G+ + +D + M+ G++ +V YNT++
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIG---SMENLGVKPNVVTYNTVIHGYCSR 284
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A + + MK + +PDS+T+ S+I+ GK+ EA + +M E G P
Sbjct: 285 GRVEGARMVLDIMK-NRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVT 343
Query: 287 LTSLIQCY 294
+LI Y
Sbjct: 344 YNTLIDGY 351
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 1/217 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ ++ L+ + +Y EM + +K + T+N +++ + + + + K M
Sbjct: 204 FNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME 263
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ PN TY +++ Y E V MK +G++ Y +L++ G +
Sbjct: 264 NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLE 323
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA I E MK P + T++++I +G + +A +EM+ P + L
Sbjct: 324 EASGILEKMKEI-GLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLL 382
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
I + D+ + + + GI PD L+N
Sbjct: 383 IHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILIN 419
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +++TLI Y G+ + + +EM +IG P ++TYN L+ + + ++ +
Sbjct: 548 RPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEE 607
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRA 191
+ KEM G++P+ +TY SL+ G+
Sbjct: 608 LLKEMVSKGITPDDSTYFSLIEGIGKV 634
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K R+ P+ AF +I+ Y AG+ L+ + M+ G P ++TYN L+ + R +
Sbjct: 535 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 594
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M+ G++PN +TY ++R Y + + ++KE G++L V +Y TL
Sbjct: 595 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 654
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L C G A + +M S + +++ ++ +I + RG V EAE + +M E G
Sbjct: 655 LRACCKSGRMQSALAVTREM-SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 713
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ TS I KA + + + ++G+ P+
Sbjct: 714 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 752
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + +++ Y N + CL V+E +K G KP++I+Y LL+ + + + +I KE
Sbjct: 404 DVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKE 463
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY+ L+ + + +++ EM G+Q +YN L+ +G
Sbjct: 464 MESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGN 523
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A I E M+ E QP + F +I + G + A + M +G P +
Sbjct: 524 MDRAICILEKMQ-KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYN 582
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + + V L+++ GITP++
Sbjct: 583 ALIHGLVRKHKVQRAVSVLDKMSIAGITPNE 613
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y T+ + ++D + TL++ +G L V EM + N YN L+D
Sbjct: 635 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWA 694
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R W+ + + K+M ++G+ PN +TY S + A +A + V EM + G++ +V
Sbjct: 695 RRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVK 754
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
Y TL+ A V D A + FE+MK + +PD ++ ++T R V E
Sbjct: 755 TYTTLIKGWARVSLPDRALKCFEEMKLA-GLKPDEASYHCLVTSLLSRATVMEG 807
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 41/266 (15%)
Query: 95 YDTRARNEKWR---IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+ RA E R I+PNAF ++L+ Y A + G L+ EEMK+ G++ ++TY+ L
Sbjct: 280 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSIL 339
Query: 150 LDTMGRAKRPWQVKTIYKE-----------------------------------MTDNGL 174
+ + ++KE M ++G+
Sbjct: 340 ISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGI 399
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+ Y S++ Y + L V+ +KE G + S+ Y LL + +G +A
Sbjct: 400 DAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALS 459
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
I ++M+S + ++ T+S +I + A A+F EML +G +P+ + LI+ +
Sbjct: 460 ISKEMESC-GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAF 518
Query: 295 GKAQRTDDVVRALNRLPELGITPDDR 320
K D + L ++ + + P +R
Sbjct: 519 CKMGNMDRAICILEKMQKERMQPSNR 544
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 126/293 (43%), Gaps = 13/293 (4%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
N+ ++ +E + KP+ + ++ + + ++ M G+ PN +
Sbjct: 247 NWQAVVSAFERIP----KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 302
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
SL+ AY AR LS EMK +G++L++ Y+ L++ A + + A +F++ K+
Sbjct: 303 SLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK 362
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ + +S++I G + AE + EM E G + + V S++ Y Q +
Sbjct: 363 LSSL-NGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENK 421
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKE----ELGKLVEC--VEKSNSKLGYVVK 356
+ RL E G P GCLLN+ + K + K +E ++ +N ++
Sbjct: 422 CLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLIN 481
Query: 357 LLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
+ D F L + + D +A N LI+ + ++ A +LE
Sbjct: 482 GFIHLHDFANAFAIFEEMLRSGLQPD--RAIYNLLIEAFCKMGNMDRAICILE 532
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K R+ P+ AF +I+ Y AG+ L+ + M+ G P ++TYN L+ + R +
Sbjct: 536 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 595
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M+ G++PN +TY ++R Y + + ++KE G++L V +Y TL
Sbjct: 596 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 655
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L C G A + +M S + +++ ++ +I + RG V EAE + +M E G
Sbjct: 656 LRACCKSGRMQSALAVTREM-SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 714
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ TS I KA + + + ++G+ P+
Sbjct: 715 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 753
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + +++ Y N + CL V+E +K G KP++I+Y LL+ + + + +I KE
Sbjct: 405 DVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKE 464
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY+ L+ + + +++ EM G+Q +YN L+ +G
Sbjct: 465 MESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGN 524
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A I E M+ E QP + F +I + G + A + M +G P +
Sbjct: 525 MDRAICILEKMQ-KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYN 583
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + + V L+++ GITP++
Sbjct: 584 ALIHGLVRKHKVQRAVSVLDKMSIAGITPNE 614
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y T+ + ++D + TL++ +G L V EM + N YN L+D
Sbjct: 636 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWA 695
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R W+ + + K+M ++G+ PN +TY S + A +A + V EM + G++ +V
Sbjct: 696 RRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVK 755
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
Y TL+ A V D A + FE+MK + +PD ++ ++T R V E
Sbjct: 756 TYTTLIKGWARVSLPDRALKCFEEMKLA-GLKPDEASYHCLVTSLLSRATVMEG 808
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 126/293 (43%), Gaps = 13/293 (4%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
N+ ++ +E + KP+ + ++ + + ++ M G+ PN +
Sbjct: 248 NWQAVVSAFERIP----KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 303
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
SL+ AY AR LS EMK +G++L++ Y+ L++ A + + A +F++ K+
Sbjct: 304 SLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK 363
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ + +S++I G + AE + EM E G + + V S++ Y Q +
Sbjct: 364 LSSL-NGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENK 422
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKE----ELGKLVEC--VEKSNSKLGYVVK 356
+ RL E G P GCLLN+ + K + K +E ++ +N ++
Sbjct: 423 CLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLIN 482
Query: 357 LLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
+ D F L + + D +A N LI+ + ++ A +LE
Sbjct: 483 GFIHLHDFANAFAIFEEMLRSGLQPD--RAIYNLLIEAFCKMGNMDRAICILE 533
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 41/266 (15%)
Query: 95 YDTRARNEKWR---IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+ RA E R I+PNAF ++L+ Y A + G L+ EEMK+ G++ ++TY+ L
Sbjct: 281 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSIL 340
Query: 150 LDTMGRAKRPWQVKTIYKE-----------------------------------MTDNGL 174
+ + ++KE M ++G+
Sbjct: 341 ISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGI 400
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+ Y S++ Y + L V+ +KE G + S+ Y LL + +G +A
Sbjct: 401 DAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALS 460
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
I ++M+S + ++ T+S +I + A A+F EML +G +P+ + LI+ +
Sbjct: 461 ISKEMESC-GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAF 519
Query: 295 GKAQRTDDVVRALNRLPELGITPDDR 320
K D + L ++ + + P +R
Sbjct: 520 CKMGNMDRAICILEKMQKERMQPSNR 545
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ LI AG + L ++ +M P + TY L+ + + R + ++ EM
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G PN +TY L+ + ++ + EM EKG+ SV YN L+ G
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D+AFEI D+ S +C P++ T++ +I + KV +A A+ N+MLE P+L S
Sbjct: 386 DDAFEIL-DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI K + R L+ + E G+ PD ++ + + + EE G L + V+
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504
Query: 349 SKLGYVV 355
K V+
Sbjct: 505 VKANEVI 511
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
VY E+ + PN+ T+N +++ + + + ++ GL P+ TY SL+ +
Sbjct: 181 VYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHC 240
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
R + ++ V+ M +KG Q + Y L+ + G +EA ++F DM + +NC P
Sbjct: 241 RNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM-TEDNCCPTV 299
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ +I S G+ EA +FNEM E G EPN+ T LI K + D+ + L+
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 310 LPELGITP 317
+ E G+ P
Sbjct: 360 MSEKGLIP 367
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 10/245 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S I G + +++ +KA GVK N + Y L+D + + ++ + M
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++ PN TY L+ + + ++ S+ +M G++ +V Y L+ G D
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A ++F M S QPD T+++ + +G + E + + +M E G P+L T L
Sbjct: 597 HALKVFNHM-VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL------NVMTQTPKEELGKLVECV 344
I Y + T L + + G P L+ N M +T + E+G ++ V
Sbjct: 656 IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET-RSEIG--IDSV 712
Query: 345 EKSNS 349
NS
Sbjct: 713 SNVNS 717
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++++M ++G + + + Y +L+ + + E+ + MKE+GM S +YN+LL C
Sbjct: 735 LFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCC 794
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G EA + + M + P ++ ++ G +A+A+F+ +L G+ +
Sbjct: 795 KLGVYAEAVRLVDAMVEN-GLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDE 853
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNV 328
LI K D+ ++ + E T D C L+ +
Sbjct: 854 VAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRL 898
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA F+ ++ G E M+++GV P ++TYN L+D + ++ + I
Sbjct: 43 PNALVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEI 102
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+EMT G PN TY + L +G +YG +D L+++R M EK ++L V Y TL+
Sbjct: 103 LQEMTGRGHEPNHVTYNTFL--HGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGL 160
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEP 282
G EA+ + ++M++S C P ++++++ C+G +++EA +F M +G P
Sbjct: 161 CQAGKLAEAYSLLDEMENS-GCVPKPGCYNAILSWL-CKGSRINEAHKLFKRMTGSGILP 218
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKL 340
+ ++ Y + R DD + L ++ G+ P + L++ + + + E L
Sbjct: 219 DWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLL 278
Query: 341 VECVEKSNSKLGYVVKLLLEEQD------IEGDFKKE 371
E + + S L+ ++Q +E D++KE
Sbjct: 279 QEMISRGLSPNSRTYALMRKQQTDDSNLVVELDYRKE 315
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 98 RARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
RA EK R+D ++TLI AG ++ +EM+ G P YN +L + +
Sbjct: 139 RAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKG 198
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + ++K MT +G+ P+W T+ ++ Y R +D L + ++MK G+ +Y
Sbjct: 199 SRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIY 258
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
NTL+ G EA+ + ++M S P+S T++ M
Sbjct: 259 NTLIDALNRAGRVSEAYRLLQEM-ISRGLSPNSRTYALM 296
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 78/184 (42%), Gaps = 1/184 (0%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M G P ++T+ L+D + +A R + + M + G PN + ++ A +
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ M+ G+ ++ YN L+ A EI ++M + +P+ T++
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEM-TGRGHEPNHVTYN 119
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ + GKV +A A+F M E +++ T+LI +A + + L+ +
Sbjct: 120 TFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS 179
Query: 314 GITP 317
G P
Sbjct: 180 GCVP 183
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 3/151 (1%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVG 227
M + G P T+ L+ +A D + M E+G + ++N ++ A+C + G
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKE-G 59
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+ EA+ E M+S P T++ +I K+ A + EM G EPN
Sbjct: 60 RSAEAYGFIETMRSM-GVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTY 118
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + K + DD + + E I D
Sbjct: 119 NTFLHGLCKYGKVDDALALFRAMTEKKIRLD 149
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 106/202 (52%), Gaps = 1/202 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++++ Y GN L V++ +K G++P +++YN+LL + +A++ + + EM
Sbjct: 300 YTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEML 359
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
NG+ PN +Y +L Y RA E +++ MK++ + + + Y LL C G
Sbjct: 360 ANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQ 419
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+F+ + + + + T+ +M+ + +G++S+A + N+M + GF + TS
Sbjct: 420 RAAEVFQQITDA-GLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSF 478
Query: 291 IQCYGKAQRTDDVVRALNRLPE 312
I+ ++ T++V L + E
Sbjct: 479 IKACFRSGDTEEVTETLAVMRE 500
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E ++ + ++T++ + + + CL+ + +KA G+ P TY ++ +A +
Sbjct: 151 EGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAK 210
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
I +EM +G+SPN YA ++ Y R V+ +M G++ + +YN L+
Sbjct: 211 ALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVH 270
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G D+A + E+++++ P T++S++ G + +A +F+ + AG
Sbjct: 271 AFCKAGRMDKALGVLENIEANR-LLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLR 329
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
P + SL+ KA++ ++ LN + G+ P++R
Sbjct: 330 PGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNER 368
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
KP + Y L+D R + ++ M + + PN + Y SL+ AY AR E ++
Sbjct: 14 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
EM +G+QL+ ++ ++++ A G + A FE K +EN P ++S++
Sbjct: 74 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK-AENLVPGGIVYNSIVQAY 132
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
G + EA+ +M E GF+ NL + T+++ + + + + + +RL G++P
Sbjct: 133 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTA 192
Query: 320 RFCGCLLNVMTQT 332
GC++ + T+
Sbjct: 193 ATYGCIVKLFTKA 205
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+++ F ++I Y +AGN + + +E+ KA + P I YN+++ +A V+
Sbjct: 84 QLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEA 143
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +M + G N Y ++L + R E LS + +K G+ + Y ++ +
Sbjct: 144 LLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFT 203
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +A +I E+M P+ ++ ++ + G + A ++ +M+ AG +P++
Sbjct: 204 KAGNMAKALDILEEM-DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 262
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ L+ + KA R D + L + + P
Sbjct: 263 VIYNILVHAFCKAGRMDKALGVLENIEANRLLP 295
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 129/299 (43%), Gaps = 27/299 (9%)
Query: 97 TRARNEKWR---IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
RA E R I PN +++LI Y A + +G + EEM + G++ N + +++
Sbjct: 36 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 95
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
A + +++ L P Y S+++AY +A E ++ +M+E+G Q
Sbjct: 96 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 155
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ LY T+L A++ ++ F +K+ P + T+ ++ + + G +++A +
Sbjct: 156 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKAC-GLSPTAATYGCIVKLFTKAGNMAKALDI 214
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC- 322
EM + G PN + ++ Y + + + G+ PD FC
Sbjct: 215 LEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCK 274
Query: 323 -GCLLNVMTQTPKEELGKLVECVEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSI 379
G + + E +L+ +E S L GYV +G ++A E+F+ I
Sbjct: 275 AGRMDKALGVLENIEANRLLPTIETYTSILDGYV----------KGGNIQKALEVFDRI 323
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM A GV PN +Y L + RA + +++ M L+ + Y +LL+A ++
Sbjct: 357 EMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSG 416
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
+ V++++ + G++ + Y T+L A G +A ++ DM+ D+ +
Sbjct: 417 AMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQ-KHGFHLDTICY 475
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+S I C G E M E E N T+LI + A D + +
Sbjct: 476 TSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKA 535
Query: 313 LGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEE 361
G+ D CLL+ L+ C + NS LG ++ + E
Sbjct: 536 SGLQLDSALSNCLLS-----------GLISCASQ-NSTLGEKIQAISAE 572
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYE 132
+SY + RA + EK++ R + E ID A+ L+K +G V++
Sbjct: 368 RSYTALTEGYARAGDV-EKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQ 426
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
++ G+K N ITY +LD R + + + +M +G + Y S ++A R+
Sbjct: 427 QITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSG 486
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
E+ M+EK ++++ Y TL+ D+A +E K+S Q DS
Sbjct: 487 DTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKAS-GLQLDS 542
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ L + Y AG+ + +++ MK + +++ Y LL ++ +
Sbjct: 363 VVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAA 422
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++++TD GL N TY ++L + R + +M++ G L Y + + C
Sbjct: 423 EVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKAC 482
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G T+E E M+ + + ++ T++++I
Sbjct: 483 FRSGDTEEVTETLAVMR-EKKLEVNARTYTTLI 514
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ G + + L V EEM G + +TYN ++ + +++R Q +Y
Sbjct: 914 DEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLY 973
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G SP TY LL +A ED +++ EM E G + + T+YN LL
Sbjct: 974 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 1033
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G T++ +F+DM + PD +++ +I T+C G++++ F ++LE G EP+L
Sbjct: 1034 GNTEKVCHLFQDM-VDQGINPDIKSYTIIIDTLCKA-GQLNDGLTYFRQLLEMGLEPDLI 1091
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVE 342
LI GK++R ++ V N + + GI P+ + +L++ E GK+ E
Sbjct: 1092 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1149
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ +I G L +++EMK G+ P +YN+L+ +A R ++K M
Sbjct: 462 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM 521
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+G PN T+ + YG++ + Y MK KG+ V N +L A G
Sbjct: 522 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRL 581
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A +F ++K+ PD+ T++ MI CS K EA +F +M+E P++ + S
Sbjct: 582 GMAKRVFHELKAM-GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 640
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI KA R D+ R +L E+ + P D LL + + K +E+ L+E + SN
Sbjct: 641 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 700
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 1/211 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P + L+ AG + N++ EM G K N YN LL+ A +V +++
Sbjct: 985 PCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQ 1044
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
+M D G++P+ +Y ++ +A D L+ +R++ E G++ + YN L+
Sbjct: 1045 DMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSK 1104
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+EA +F +M+ + P+ +T++S+I GK +EA M+ E+L G++PN+F
Sbjct: 1105 RLEEAVSLFNEMQK-KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1163
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI+ Y + TD A R+ G P+
Sbjct: 1164 NALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 108 PNAFSTL--IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ + I YG +G + YE MK+ G+ P+++ N +L + ++ R K +
Sbjct: 528 PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 587
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ G+SP+ TY +++ +A ++ + ++ +M E V N+L+
Sbjct: 588 FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYK 647
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA+ IF +K N +P T+++++ GKV E + EM + + PNL
Sbjct: 648 AGRGDEAWRIFYQLKEM-NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 706
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ C K +D + L + G PD
Sbjct: 707 TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 739
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S I++ G A FD + +M+ G KP++IT+ L+ + A R
Sbjct: 347 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRI 406
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M + P+ TY +LL +G + + ++ MK G +V Y +
Sbjct: 407 SDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAV 466
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ VG EA E+F++MK + P+ ++++S+I+ + +A +F M G
Sbjct: 467 IDALCQVGRVFEALEMFDEMK-QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 525
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+PN + I YGK+ + ++ + GI PD
Sbjct: 526 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 564
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S L+ +G + + L + EM+A GVKPN+ +Y + +G+AKR + I +M
Sbjct: 323 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 382
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G P+ T+ L++ A D V+ +MK+ + Y TLL D G +
Sbjct: 383 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 442
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EI+ MK ++ + ++++I G+V EA MF+EM + G P + SL
Sbjct: 443 SVMEIWNAMK-ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 501
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I + KA R D + + G P+
Sbjct: 502 ISGFLKADRFGDALELFKHMDIHGPKPN 529
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ + G G MK G+ N TYN L+ + ++ + +Y+ M
Sbjct: 253 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 312
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ TY+ L+ A+G+ R E L + REM+ G++ +V Y + + D
Sbjct: 313 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFD 372
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+ I M+ +E C+PD T + +I + G++S+A+ +F +M ++ +P+ +L
Sbjct: 373 EAYRILAKME-NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 431
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +G + V+ N + G + +++ + Q +G++ E +E
Sbjct: 432 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ-----VGRVFEALE 481
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 1/191 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L VY M GV P++ TY+ L+ G+ + V + +EM +G+ PN +Y +R
Sbjct: 305 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 364
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
G+A+ ++ + +M+ +G + V + L+ + D G +A ++F MK S+ +P
Sbjct: 365 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ-KP 423
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T+ +++ G ++N M G+ N+ T++I + R + +
Sbjct: 424 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 483
Query: 308 NRLPELGITPD 318
+ + + GI P+
Sbjct: 484 DEMKQKGIVPE 494
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ +I AG + L + ++ +G++P++ITYN L+D +G++KR + +++
Sbjct: 1054 DIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 1113
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN TY SL+ G+A + +Y E+ KG + +V YN L+ +
Sbjct: 1114 NEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVS 1173
Query: 227 GYTDEAFEIFEDMKSSENCQPD 248
G TD A+ + M C P+
Sbjct: 1174 GSTDSAYAAYGRMIVG-GCLPN 1194
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
+ NE + D + LI++ AG +V+ +MK KP+ +TY LLD G
Sbjct: 379 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 438
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
V I+ M +G + N Y +++ A + + L ++ EMK+KG+ Y
Sbjct: 439 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 498
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N+L++ +A E+F+ M +P+ +T I G+ +A + M
Sbjct: 499 NSLISGFLKADRFGDALELFKHM-DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 557
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G P++ +++ K+ R R + L +G++PD
Sbjct: 558 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPD 599
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 142/321 (44%), Gaps = 11/321 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +IK A FD + ++ +M P+++ N+L+DT+ +A R + I+
Sbjct: 599 DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIF 658
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ + L P TY +LL GR ++ + + EM ++ YNT+L
Sbjct: 659 YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKN 718
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A ++ M +++ C PD +++++I + +EA ++F +M + P+
Sbjct: 719 GAVNDALDMLYSM-TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYAT 776
Query: 287 LTSLIQCYGKAQRTDDVVRAL-NRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECV 344
L +++ + K + + + + + G D C L+ ++ + E+ + E +
Sbjct: 777 LCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEII 836
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATEL---FNSISKDVKKAYCNCLIDLCVNLNLL 401
S L L + + EA EL F S +K N LI V+ NL+
Sbjct: 837 ASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLI 896
Query: 402 ENA----CKLLELGLTLEVYT 418
+ A ++ ELG + +T
Sbjct: 897 DIAEGLFAEMKELGCGPDEFT 917
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
++ K G+ L LYN+L+ D D A +F +MK C PD +T++ ++
Sbjct: 869 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAMGK 927
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
++ E + EM G+E ++I K++R + + L G +P
Sbjct: 928 SMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCT 987
Query: 322 CGCLLNVMTQTPKEE-----LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF 376
G LL+ + + + E +++E K+N + +LL I G+ +K LF
Sbjct: 988 YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT---IYNILLNGHRIAGNTEK-VCHLF 1043
Query: 377 -----NSISKDVKKAYCNCLIDLCVNLNL---LENACKLLELGLTLEVYT 418
I+ D+ K+Y + LC L L +LLE+GL ++ T
Sbjct: 1044 QDMVDQGINPDI-KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1092
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K R+ P+ AF +I+ Y AG+ L+ + M+ G P ++TYN L+ + R +
Sbjct: 514 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 573
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M+ G++PN +TY ++R Y + + ++KE G++L V +Y TL
Sbjct: 574 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 633
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L C G A + +M S + +++ ++ +I + RG V EAE + +M E G
Sbjct: 634 LRACCKSGRMQSALAVTREM-SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDG 692
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ TS I KA + + + ++G+ P+
Sbjct: 693 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 731
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + +++ Y N + CL V+E +K G KP++I+Y LL+ + + + +I KE
Sbjct: 383 DVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKE 442
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY+ L+ + + +++ EM G+Q +YN L+ +G
Sbjct: 443 MESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGN 502
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A I E M+ E QP + F +I + G + A + M +G P +
Sbjct: 503 MDRAICILEKMQ-KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYN 561
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + + V L+++ GITP++
Sbjct: 562 ALIHGLVRKHKVQRAVSVLDKMSIAGITPNE 592
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y T+ + ++D + TL++ +G L V EM + N YN L+D
Sbjct: 614 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWA 673
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R W+ + + K+M ++G+ PN +TY S + A +A + V EM + G++ +V
Sbjct: 674 RRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVK 733
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
Y TL+ A V D A + FE+MK + +PD ++ ++T R V E
Sbjct: 734 TYTTLIKGWARVSLPDRALKCFEEMKLA-GLKPDEASYHCLVTSLLSRATVMEG 786
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 126/293 (43%), Gaps = 13/293 (4%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
N+ ++ +E + KP+ + ++ + + ++ M G+ PN +
Sbjct: 226 NWQAVVSAFERIP----KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 281
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
SL+ AY AR LS EMK +G++L++ Y+ L++ A + + A +F++ K+
Sbjct: 282 SLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK 341
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ + +S++I G + AE + EM E G + + V S++ Y Q +
Sbjct: 342 LSSL-NGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENK 400
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKE----ELGKLVEC--VEKSNSKLGYVVK 356
+ RL E G P GCLLN+ + K + K +E ++ +N ++
Sbjct: 401 CLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLIN 460
Query: 357 LLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
+ D F L + + D +A N LI+ + ++ A +LE
Sbjct: 461 GFIHLHDFANAFAIFEEMLRSGLQPD--RAIYNLLIEAFCKMGNMDRAICILE 511
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 41/266 (15%)
Query: 95 YDTRARNEKWR---IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+ RA E R I+PNAF ++L+ Y A + G L+ EEMK+ G++ ++TY+ L
Sbjct: 259 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSIL 318
Query: 150 LDTMGRAKRPWQVKTIYKE-----------------------------------MTDNGL 174
+ + ++KE M ++G+
Sbjct: 319 ISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGI 378
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+ Y S++ Y + L V+ +KE G + S+ Y LL + +G +A
Sbjct: 379 DAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALS 438
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
I ++M+S + ++ T+S +I + A A+F EML +G +P+ + LI+ +
Sbjct: 439 ISKEMESC-GIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAF 497
Query: 295 GKAQRTDDVVRALNRLPELGITPDDR 320
K D + L ++ + + P +R
Sbjct: 498 CKMGNMDRAICILEKMQKERMQPSNR 523
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 4/232 (1%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
A +L YD +E D +A+ ++++ AG L++ ++ + + + Y
Sbjct: 448 AHRLLHLQYDWSFHDEG---DRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMY 504
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N +L +G+ K+ + +Y++M +G SP+ +Y L+ ++GRA E+ + ++ E++
Sbjct: 505 NTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELEN 564
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+ + +N+L+ G DEA F++M+ E PD T+S++I KV
Sbjct: 565 SSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMR-EEGLSPDVVTYSTLIECFGKTDKVE 623
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A +F+EML G PN+ L+ C ++ RT + V +L + G+TPD
Sbjct: 624 MACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 675
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 43/266 (16%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ ++M+ GV+ ++ T N L+ G V+ + + L N TY LL+A+
Sbjct: 180 ILDDMERCGVRGSISTINILIGIFGGGA---DVERCFDLVKKWDLQMNCYTYKCLLQAHL 236
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT------------------- 229
R+ VY E++ +G +L + YN LL A+ D T
Sbjct: 237 RSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKLTWNLLLVCLQIAELLDCLTV 296
Query: 230 ------------DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
D+ + +F+DMK ++C+PD +T++ MI + GK E+ +F EM E
Sbjct: 297 ALDNDKIISVEVDQVYMVFKDMKR-KHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTE 355
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
G+ PNL ++IQ + D + +++ E P+ +LNV+ + +L
Sbjct: 356 KGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVL--VAEGQL 413
Query: 338 GKLVECVEKSN-----SKLGYVVKLL 358
G+L E VE SN S Y+V+ L
Sbjct: 414 GRLDEVVEVSNKFMNKSIYAYLVRTL 439
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA-KR 158
+KW + N ++ L++ + + N + VY E++ G K ++ YN LLD + + K
Sbjct: 217 KKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKL 276
Query: 159 PW-------------------------------QVKTIYKEMTDNGLSPNWNTYASLLRA 187
W QV ++K+M P+ TY ++R
Sbjct: 277 TWNLLLVCLQIAELLDCLTVALDNDKIISVEVDQVYMVFKDMKRKHCEPDEYTYTIMIRM 336
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
G+ +++L++++EM EKG ++ YNT++ A+ D+ +F M + NC+P
Sbjct: 337 TGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVEN-NCRP 395
Query: 248 DSWTFSSMITICSCRGKVSEAE 269
+ +TFS ++ + G++ +
Sbjct: 396 NGFTFSVILNVLVAEGQLGRLD 417
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 112/247 (45%), Gaps = 7/247 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I++ G G D L +++EM G PN+I YN ++ + + + ++
Sbjct: 326 DEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLF 385
Query: 167 KEMTDNGLSPNWNTYASLLRA-YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+M +N PN T++ +L + G L E+ K M S+ Y L+ +
Sbjct: 386 SKMVENNCRPNGFTFSVILNVLVAEGQLGR--LDEVVEVSNKFMNKSI--YAYLVRTLSK 441
Query: 226 VGYTDEAFEIFE-DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G+ EA + S + + D + SM+ GK +EA + +++ E +
Sbjct: 442 LGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDT 501
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVEC 343
+ +++ GK ++T D+ ++ + G +PD L++ + + EE K+ E
Sbjct: 502 VMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEE 561
Query: 344 VEKSNSK 350
+E S+ K
Sbjct: 562 LENSSCK 568
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R E D +STLI+ +G + +++EM A G PN++TYN LLD + R+ R
Sbjct: 598 REEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRT 657
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ +Y ++ GL+P+ TYA L R
Sbjct: 658 AEAVDLYAKLKQQGLTPDSITYAVLER 684
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 69 KTGSSPK--SYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNF 124
+ G SP SY + RA +++E K ++ N + D +F++LI G G+
Sbjct: 529 QDGPSPDIFSYNILISSFGRAGRVEEAVKIFE-ELENSSCKPDIISFNSLINCLGKNGDI 587
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D ++EM+ G+ P+++TY+ L++ G+ + ++ EM G SPN TY L
Sbjct: 588 DEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNIL 647
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
L R+ + + +Y ++K++G+ Y L
Sbjct: 648 LDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 682
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF IK + AG + V+E M+ G + ++N LL + + + ++
Sbjct: 256 DAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDR 315
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D +P+ +Y +L+ A+ AR + V+ EM E G++ V ++NT++
Sbjct: 316 MRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQR 374
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
EA ++FE MK+ + P+ WT++ +I RGK+ A F EM + G +P++ T
Sbjct: 375 RPEAVKMFELMKA-KGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYT 433
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
L+ YG A+R D V L + + G PD R L+ ++T
Sbjct: 434 CLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLT 475
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+++ D +++ L+ + A N V+ EM G+KP+++ +N +++ + R +R +
Sbjct: 318 DRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPE 377
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+++ M G +PN TY L+R + + + + + EM++ G Q V Y LL
Sbjct: 378 AVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLV 437
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ D + E+M + + C PD T++++I + + R +A ++ +M++ G E
Sbjct: 438 GYGNAKRMDRVTALLEEM-TQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLE 496
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRAL-NRLPELGITPDDRFCGCLLN--VMTQTPKEELG 338
P + +++ Y R + A+ + GI PD +N + P+E
Sbjct: 497 PTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACK 556
Query: 339 KLVECVEKS 347
+ E ++K
Sbjct: 557 YIEEMIQKG 565
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI+ + G D + +EEM+ +G +P++ TY LL G AKR +V +
Sbjct: 392 PNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTAL 451
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA--MC 223
+EMT G P+ TY +L++ +D +Y++M +KG++ ++ YN ++
Sbjct: 452 LEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFL 511
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
Y ++E+M C PD +++ I G+ EA EM++ G +
Sbjct: 512 GGRNYM-MGCAVWEEMHRKGIC-PDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMK 567
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D ++ LIKL D +Y++M G++P + TYN ++ + R + + +
Sbjct: 463 DGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAV 522
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++EM G+ P+ N+Y + + R E+ EM +KGM+ YN A
Sbjct: 523 WEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAA 578
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 172 NGLSPNWNTYASLLRAYGRARY--------------------------------GE--DT 197
G + TY ++ G+AR GE +
Sbjct: 215 GGFAHTTITYCKMVHILGKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNA 274
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS-MI 256
+ V+ M+ G V +N LL A G EA ++F+ M+ + PD ++++ M+
Sbjct: 275 VGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMR--DRYAPDLRSYTALML 332
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
C+ R V EA ++NEMLE G +P++ V ++I+ + QR + V+ + G
Sbjct: 333 AWCNARNLV-EAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPA 391
Query: 317 PD 318
P+
Sbjct: 392 PN 393
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
GN + ++V++ MK KP TYN +++ G+A + + +Y EM + PN TY
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+L+ A+ R E ++ +++E G++ V +YN L+ + GY A EIF M+
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
C+PD +++ M+ G S+AEA+F EM G P + L+ Y KA+
Sbjct: 363 M-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNV 328
+ + E G+ PD +LN+
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNL 448
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ D R ++ R P ++ +I LYG A +Y EM++ KPN+ TY L
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + + I++++ ++GL P+ Y +L+ +Y RA Y ++ M+ G
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ YN ++ G +A +FE+MK P + +++ S V++ E
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHMLLLSAYSKARDVTKCE 424
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
A+ EM E G EP+ FVL S++ YG+ + + + L + T D L+N+
Sbjct: 425 AIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L++ Y AG G ++ M+ +G +P+ +YN ++D GRA + ++
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G++P ++ LL AY +AR ++ +EM E G++ + N++L + +
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + +I +M++ C D T++ +I I G + E +F E+ E F P++
Sbjct: 453 GQFTKMEKILAEMENGP-CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVT 511
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
TS I Y + + + + + G PD LL+
Sbjct: 512 WTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 552
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ ++ YG AG V+EEMK +G+ P M ++ LL +A+ + + I
Sbjct: 368 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 427
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM++NG+ P+ S+L YGR + EM+ ++ YN L+ +
Sbjct: 428 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 487
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ + E+F ++K +N +PD T++S I S + + +F EM+++G P+
Sbjct: 488 GFLERIEELFVELK-EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 546
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
L+ ++ + V L + + G+T
Sbjct: 547 AKVLLSACSSEEQVEQVTSVLRTMHK-GVT 575
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P++I +N L+D G+ + + +++Y ++ ++ P +TYA L++AY A E
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 200 VYREMKEKGMQ---LSVTLYNTLL-AMCADVGYTDEAFEIFEDMK--------------- 240
V EM+ + + VT+YN + + G T+EA ++F+ MK
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 241 -------------------SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
S C+P+ T+++++ + G +AE +F ++ E G E
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+++V +L++ Y +A + + +G PD
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 368
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ G + + L V EEM G + +TYN ++ + +++R Q +Y
Sbjct: 789 DEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLY 848
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G SP TY LL +A ED +++ EM E G + + T+YN LL
Sbjct: 849 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 908
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G T++ +F+DM + PD +++ +I T+C G++++ F ++LE G EP+L
Sbjct: 909 GNTEKVCHLFQDM-VDQGINPDIKSYTIIIDTLCKA-GQLNDGLTYFRQLLEMGLEPDLI 966
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVE 342
LI GK++R ++ V N + + GI P+ + +L++ E GK+ E
Sbjct: 967 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1024
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ +I G L +++EMK G+ P +YN+L+ +A R ++K M
Sbjct: 337 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM 396
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+G PN T+ + YG++ + Y MK KG+ V N +L A G
Sbjct: 397 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRL 456
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A +F ++K+ PD+ T++ MI CS K EA +F +M+E P++ + S
Sbjct: 457 GMAKRVFHELKAM-GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 515
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI KA R D+ R +L E+ + P D LL + + K +E+ L+E + SN
Sbjct: 516 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 575
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 1/211 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P + L+ AG + N++ EM G K N YN LL+ A +V +++
Sbjct: 860 PCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQ 919
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
+M D G++P+ +Y ++ +A D L+ +R++ E G++ + YN L+
Sbjct: 920 DMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSK 979
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+EA +F +M+ + P+ +T++S+I GK +EA M+ E+L G++PN+F
Sbjct: 980 RLEEAVSLFNEMQK-KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1038
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI+ Y + TD A R+ G P+
Sbjct: 1039 NALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1069
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 108 PNAFSTL--IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ + I YG +G + YE MK+ G+ P+++ N +L + ++ R K +
Sbjct: 403 PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 462
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ G+SP+ TY +++ +A ++ + ++ +M E V N+L+
Sbjct: 463 FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYK 522
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA+ IF +K N +P T+++++ GKV E + EM + + PNL
Sbjct: 523 AGRGDEAWRIFYQLKEM-NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 581
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ C K +D + L + G PD
Sbjct: 582 TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 614
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S I++ G A FD + +M+ G KP++IT+ L+ + A R
Sbjct: 222 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRI 281
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M + P+ TY +LL +G + + ++ MK G +V Y +
Sbjct: 282 SDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAV 341
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ VG EA E+F++MK + P+ ++++S+I+ + +A +F M G
Sbjct: 342 IDALCQVGRVFEALEMFDEMK-QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 400
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+PN + I YGK+ + ++ + GI PD
Sbjct: 401 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 439
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S L+ +G + + L + EM+A GVKPN+ +Y + +G+AKR + I +M
Sbjct: 198 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 257
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G P+ T+ L++ A D V+ +MK+ + Y TLL D G +
Sbjct: 258 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 317
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EI+ MK ++ + ++++I G+V EA MF+EM + G P + SL
Sbjct: 318 SVMEIWNAMK-ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 376
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I + KA R D + + G P+
Sbjct: 377 ISGFLKADRFGDALELFKHMDIHGPKPN 404
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ +I AG + L + ++ +G++P++ITYN L+D +G++KR + +++
Sbjct: 929 DIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 988
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN TY SL+ G+A + +Y E+ KG + +V YN L+ +
Sbjct: 989 NEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVS 1048
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
G TD A+ + M C P+S T+ +
Sbjct: 1049 GSTDSAYAAYGRMIVG-GCLPNSSTYMQL 1076
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ + G G MK G+ N TYN L+ + ++ + +Y+ M
Sbjct: 128 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 187
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ TY+ L+ A+G+ R E L + REM+ G++ +V Y + + D
Sbjct: 188 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFD 247
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+ I M+ +E C+PD T + +I + G++S+A+ +F +M ++ +P+ +L
Sbjct: 248 EAYRILAKME-NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 306
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +G + V+ N + G + +++ + Q +G++ E +E
Sbjct: 307 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ-----VGRVFEALE 356
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 1/191 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L VY M GV P++ TY+ L+ G+ + V + +EM +G+ PN +Y +R
Sbjct: 180 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 239
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
G+A+ ++ + +M+ +G + V + L+ + D G +A ++F MK S+ +P
Sbjct: 240 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ-KP 298
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T+ +++ G ++N M G+ N+ T++I + R + +
Sbjct: 299 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 358
Query: 308 NRLPELGITPD 318
+ + + GI P+
Sbjct: 359 DEMKQKGIVPE 369
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 34/256 (13%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
+ NE + D + LI++ AG +V+ +MK KP+ +TY LLD G
Sbjct: 254 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 313
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
V I+ M +G + N Y +++ A + + L ++ EMK+KG+ Y
Sbjct: 314 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 373
Query: 217 NTLLAMCADVGYTDEAFEIFEDM--------------------KSSENCQ---------- 246
N+L++ +A E+F+ M KS E+ +
Sbjct: 374 NSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKS 433
Query: 247 ----PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
PD ++++ + G++ A+ +F+E+ G P+ T +I+C KA + D+
Sbjct: 434 KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 493
Query: 303 VVRALNRLPELGITPD 318
V+ + E PD
Sbjct: 494 AVKIFYDMIENNCVPD 509
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +IK A FD + ++ +M P+++ N+L+DT+ +A R + I+
Sbjct: 474 DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIF 533
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ + L P TY +LL GR ++ + + EM ++ YNT+L
Sbjct: 534 YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKN 593
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
G ++A ++ M +++ C PD +++++I + +EA ++F +M
Sbjct: 594 GAVNDALDMLYSM-TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 641
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
++ K G+ L LYN+L+ D D A +F +MK C PD +T++ ++
Sbjct: 744 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAMGK 802
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
++ E + EM G+E ++I K++R + + L G +P
Sbjct: 803 SMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCT 862
Query: 322 CGCLLNVMTQTPKEE-----LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF 376
G LL+ + + + E +++E K+N + +LL I G+ +K LF
Sbjct: 863 YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT---IYNILLNGHRIAGNTEK-VCHLF 918
Query: 377 -----NSISKDVKKAYCNCLIDLCVNLNL---LENACKLLELGLTLEVYT 418
I+ D+ K+Y + LC L L +LLE+GL ++ T
Sbjct: 919 QDMVDQGINPDI-KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 967
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 6/225 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++++I Y AG + + VY +M A+G PN++TYN L++ G+A +
Sbjct: 303 PNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAV 362
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y++M P+ T++SL+ Y R +D + ++ EM + +Q + + ++
Sbjct: 363 YQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCK 422
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ EA + M + P ++ ++ +I + GKV EA + EM E G P+ +
Sbjct: 423 QNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKY 482
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----DRFCGCLL 326
T LI + R + V +++ E G +PD + F CLL
Sbjct: 483 TYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLL 527
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 40/203 (19%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FS+LI Y G D + ++ EM ++PN T+ ++ T + R +
Sbjct: 374 DVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFL 433
Query: 167 KEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K+M ++P Y N ++ +
Sbjct: 434 KKMNMRTDIAPQAFIY-----------------------------------NPVIDVLCK 458
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA I +M+ + C+PD +T++ +I +G+++EA F++M+E G P+
Sbjct: 459 GGKVDEANMILIEME-EKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSI 517
Query: 286 VLTSLIQCY---GKAQRTDDVVR 305
V+ S I C G D ++R
Sbjct: 518 VVNSFISCLLKSGMPGEVDHIMR 540
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 9/189 (4%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGL-SPNWNTYASLLRAYGRARYGEDTLSVYRE 203
YN L+D R +++ G+ SP+ ++ +++ + + L +
Sbjct: 200 AYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVER 259
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M E G +N L+ + E+ ++ C P+ T++S+I+ G
Sbjct: 260 MDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAG 319
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----- 318
++ +A A++N+M+ G PN+ LI YGKA V ++ PD
Sbjct: 320 RMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFS 379
Query: 319 ---DRFCGC 324
D +C C
Sbjct: 380 SLIDGYCRC 388
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/289 (18%), Positives = 118/289 (40%), Gaps = 13/289 (4%)
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD-NGLSPNWNTYASLLRAYGRARYGE 195
+ + P+ +Y ++ M ++ R ++ +MTD +G PN + L + A +
Sbjct: 121 LAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLD 180
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
++ + + G + YN L+ + G +A +FE PD W+F+ +
Sbjct: 181 AAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVV 240
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I G V +A + M E G P+ L+ +A+ L RL G+
Sbjct: 241 IKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGV 300
Query: 316 TPDDRFCGCLLNVMTQTPKE----ELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKE 371
C+ NV+T T + G++ + + N + + ++ + +
Sbjct: 301 --------CMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGK 352
Query: 372 ATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDI 420
A + ++++ + CL D+ +L++ C+ +L ++++T++
Sbjct: 353 AGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEM 401
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 116/226 (51%), Gaps = 11/226 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ P S +I++ G A + ++ ++KA +P YN+++ + + +V +
Sbjct: 157 VTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL 216
Query: 166 YKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
Y EM++ G P+ TY++L+ A+ + + + + EMKE GMQ + +Y ++++
Sbjct: 217 YNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFF 276
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ A +FE+M+ C+PD +T++ +I G++ EA ++EM G +P+
Sbjct: 277 KLDNVHGALSLFEEMRYM-YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDT 335
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
V+ ++I GKA R DD L E+G++ C+ NV+T
Sbjct: 336 VVMNNMINFLGKAGRLDD---GLKLFEEMGVS------HCIPNVVT 372
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 39/265 (14%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA-------- 156
R D ++ LI+ G AG D + Y EM+ G KP+ + NN+++ +G+A
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLK 356
Query: 157 ----------------------------KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
R +V + ++ M +G+SP+ TY+ L+ +
Sbjct: 357 LFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGF 416
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ E + + EM EKG Y +L+ D A E+F+++K ENC
Sbjct: 417 CKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK--ENCGSS 474
Query: 249 SW-TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
S ++ MI G++ +A +F+EM + G PN++ +L+ +A D+ + +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTM 534
Query: 308 NRLPELGITPDDRFCGCLLNVMTQT 332
++ E G PD +LN + +T
Sbjct: 535 RKMQEHGCLPDINSYNIILNGLAKT 559
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 1/192 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A +D +++E+K + Y ++ +G+A R ++
Sbjct: 441 PAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFD 500
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM+ G +PN Y +L+ RA ++ L+ R+M+E G + YN +L A G
Sbjct: 501 EMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+ +MK+S +PD+ +++++++ S G EA + EM GFE +L
Sbjct: 561 GPHRAMEMLTNMKNS-TIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITY 619
Query: 288 TSLIQCYGKAQR 299
+S+++ GK +
Sbjct: 620 SSILEAIGKVDQ 631
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 122/278 (43%), Gaps = 5/278 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + G D + + EMK G++P Y ++ + +++
Sbjct: 229 DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLF 288
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM P+ TY L+R G+A ++ Y EM+ +G + + N ++
Sbjct: 289 EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKA 348
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+ ++FE+M S +C P+ T++++I + + +VSE + F M +G P+ F
Sbjct: 349 GRLDDGLKLFEEMGVS-HCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPF 407
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG--KLVEC 343
+ LI + K R + + L + E G P L++ + + + +L E
Sbjct: 408 TYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
E S V ++++ G +A LF+ +SK
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRL-DDAINLFDEMSK 504
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 150/361 (41%), Gaps = 41/361 (11%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTM 153
Y +AR K + A++++I + G ++ +Y EM G +P+ +TY+ L+
Sbjct: 183 YQIKAR--KCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAF 240
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ R + EM +NG+ P Y ++ + + LS++ EM+ + V
Sbjct: 241 CKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDV 300
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
Y L+ G DEA+ + +M+ E C+PD+ ++MI G++ + +F
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFYHEMQ-REGCKPDTVVMNNMINFLGKAGRLDDGLKLFE 359
Query: 274 EMLEAGFEPNLFVLTSLIQC-YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
EM + PN+ ++I+ + R +V R+ GI+P L++ +T
Sbjct: 360 EMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKT 419
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI 392
+ +EK+ +LLEE D +G AYC+ LI
Sbjct: 420 NR---------IEKA--------MMLLEEMDEKG-------------FPPCPAAYCS-LI 448
Query: 393 DLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
D + AC+L + E+ + S S +++ +K L L +++S
Sbjct: 449 DALGKAKRYDLACELFQ-----ELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMS 503
Query: 453 K 453
K
Sbjct: 504 K 504
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 108 PNA--FSTLIK-LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
PN ++T+IK L+ + + +E MK G+ P+ TY+ L+D + R +
Sbjct: 368 PNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMM 427
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +EM + G P Y SL+ A G+A+ + +++E+KE S +Y ++
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D+A +F++M S C P+ + ++++++ + + EA +M E G P++
Sbjct: 488 KAGRLDDAINLFDEM-SKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDI 546
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ K + L + I PD
Sbjct: 547 NSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPD 580
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ ++R G A+ ++++ ++K + Q + YN+++ M G ++ E++ +M +
Sbjct: 163 SQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN 222
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+CQPD+ T+S++I+ G+ A + NEM E G +P + T +I + K D
Sbjct: 223 EGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFK---LD 279
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+V AL+ E+ R+ C +V T T
Sbjct: 280 NVHGALSLFEEM------RYMYCRPDVFTYT 304
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 69 KTGSSPKSYIWVNPKS--PRASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFD 125
K G +P Y + S RA L E R E + D N+++ ++ G
Sbjct: 504 KLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPH 563
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + MK +KP+ ++YN +L + A + + KEM G + TY+S+L
Sbjct: 564 RAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSIL 623
Query: 186 RAYGRA 191
A G+
Sbjct: 624 EAIGKV 629
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 109/216 (50%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+ ++ + + ++ LI + A F + VY +M P ITYN L+ + +A++ +
Sbjct: 469 DSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLE 528
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+EM + G + NTY SL+R R + + L+++ ++ +KG+Q V ++N L+
Sbjct: 529 ASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIH 588
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G DEA ++ +MK NC P+ T+++++ G +A +++ +LE G
Sbjct: 589 GLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLV 648
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P++ + I+ RT + V+ LN + GI P
Sbjct: 649 PDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIP 684
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G F +V+E M A +P+MITY ++ + R+ +Y EM GL P+ Y
Sbjct: 279 GMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIY 338
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
SLL+ + A + + M G++ +VT YN +L D G D+A +++E ++
Sbjct: 339 NSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEK 397
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
++ PD TFS+MI +G +++ + E +G E + F +S+I K R D
Sbjct: 398 DDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLD 457
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
D V+ ++ P+ L+N Q K
Sbjct: 458 DAVKLYEKISMDSFKPNSHIYNALINGFCQASK 490
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 106/213 (49%), Gaps = 5/213 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + T+I + + D VY EM G+ P+++ YN+LL A R + +
Sbjct: 299 DMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFW 358
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS--VTLYNTLLAMCA 224
M+ +G+ N +Y +L+ + ++ E+ EK LS + ++T++
Sbjct: 359 DSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTFSTMIHGLC 416
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G+ +++ +I E+ ++S + D +++SSMI+ G++ +A ++ ++ F+PN
Sbjct: 417 EKGFANKSLQILEEARTSGK-ELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNS 475
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ +LI + +A + D +R +++ E +P
Sbjct: 476 HIYNALINGFCQASKFSDAIRVYSQMAENDCSP 508
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ PN+ TYN +L ++ + T++ + GL+P+ TY++L+ + + ++ L
Sbjct: 155 IAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNAL 214
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
+ EM +Q YN LL C G ++A ++E + P+ T++ M+
Sbjct: 215 YLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDG 274
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G EA ++ M+ +P++ ++I ++ D R + + + G+ PD
Sbjct: 275 LCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPD 334
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 97/207 (46%), Gaps = 3/207 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FST+I G + L + EE + G + + +Y++++ + + R +Y
Sbjct: 404 DMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLY 463
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
++++ + PN + Y +L+ + +A D + VY +M E + YNTL+ +C
Sbjct: 464 EKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKA 523
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
Y EA +M + C D T+ S+I K+ A A++N++L+ G + ++
Sbjct: 524 EKYL-EASRFTREML-EKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVV 581
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ LI A + D+ + L+ + E
Sbjct: 582 MHNILIHGLCSAGKVDEASQLLSEMKE 608
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 6/206 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-- 163
PNA F+TLI AG + + ++EM GVKP ++TYN L+D + +A++ ++K
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455
Query: 164 -TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
T++ M + G P+ TY++L+ G+A +D + M+ KG +V YN+L++
Sbjct: 456 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ DEA E+F M + C PD+ T+ ++I+ + V +A A+F+ LEAG P
Sbjct: 516 LCGLDKVDEALELFVAM-VEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVP 574
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALN 308
+ SLI R D+ ++ L
Sbjct: 575 TSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 113/234 (48%), Gaps = 6/234 (2%)
Query: 103 KWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K ++P+A + + + G AG + L + ++M G P+++++N +++ + + KR
Sbjct: 321 KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVD 380
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + + M G SPN ++ +L+ RA + ++ ++EM ++G++ +V YN L+
Sbjct: 381 EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 440
Query: 221 -AMCA--DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+C G EA +F+ M PD T+S++I GK+ +A + M
Sbjct: 441 DGLCKARQEGRIKEAITLFDAMIEKGRV-PDVVTYSALIDGLGKAGKLDDARRLLGAMEA 499
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
G PN++ SLI + D+ + + E G PD G +++ + +
Sbjct: 500 KGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCK 553
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
K D + F+ I A V++ M+ G PN ITYN LL + R
Sbjct: 45 KGLCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDA 104
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ +Y+ M G SP+ TY +LL + + ++ L ++ ++G V YN L+
Sbjct: 105 QALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALING 164
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
DEA I + M SE+ PD T++S++ G+V EA + +++ GF P
Sbjct: 165 FCKADKLDEAQRILQRM-VSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSP 220
Query: 283 NLFVLTSLIQCYGKA-QRTDDVVRALNRLPELGITPD 318
N+ ++LI + +R + + L ++ G PD
Sbjct: 221 NVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPD 257
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+A G PN I++N L+ RA + + T +KEM G+ P TY L+ +AR
Sbjct: 389 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 448
Query: 194 G---EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
++ ++++ M EKG V Y+ L+ G D+A + M++ + C P+ +
Sbjct: 449 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEA-KGCIPNVY 507
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++S+I+ KV EA +F M+E G P+ ++I K + D + +
Sbjct: 508 TYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGS 567
Query: 311 PELGITP 317
E G+ P
Sbjct: 568 LEAGVVP 574
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ + G D L +++ G P+++TYN L++ +A + + + I
Sbjct: 119 DVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 178
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR-ARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCA 224
+ M L P+ TY SL+ + R E + + +KG +V Y+TL++ +C
Sbjct: 179 QRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV----DKGFSPNVITYSTLISGLCR 234
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
++ + A ++ E M + C+PD +++++I + VSEA +F +L G+EP +
Sbjct: 235 ELRRLESARQLLEKMVLN-GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEV 293
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI K R ++ + L + G+ PD
Sbjct: 294 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPD 327
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 39/219 (17%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G +P + TYN L+D + + R + ++ + +GL P+ TY + +A ED
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 347
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
L + ++M EKG V +N ++ DEA + M+ ++ C P++ +F+++I
Sbjct: 348 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME-AKGCSPNAISFNTLIC 406
Query: 258 ------------------------------------ICSCR--GKVSEAEAMFNEMLEAG 279
+C R G++ EA +F+ M+E G
Sbjct: 407 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 466
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ ++LI GKA + DD R L + G P+
Sbjct: 467 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPN 505
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
K+ + ++KE A EK R+ D +S LI G AG D + M+A G P
Sbjct: 445 KARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIP 504
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
N+ TYN+L+ + + + ++ M + G P+ TY +++ A + + L+++
Sbjct: 505 NVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALF 564
Query: 202 REMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFE 237
E G+ + +Y +L+ +CA V DEA ++ +
Sbjct: 565 DGSLEAGVVPTSGMYFSLIDGLCA-VARVDEALKLLQ 600
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 42/283 (14%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLS--PNWNTYAS-LLR 186
VY+++ I P+ T LL ++ ++ + + +++ GL +N Y S L R
Sbjct: 4 VYDKLVRI-YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCR 62
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
A +R G D +V+ M++ G + YN LL+ + G +A ++E M +
Sbjct: 63 A---SRIG-DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKA-GYS 117
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD T+++++ GK+ EA +F+ ++ GF P++ +LI + KA + D+ R
Sbjct: 118 PDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI 177
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEG 366
L R+ + PD L+N + + + + +++ V+K S
Sbjct: 178 LQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML-IVDKGFSP---------------- 220
Query: 367 DFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
N I+ Y + LC L LE+A +LLE
Sbjct: 221 ----------NVIT------YSTLISGLCRELRRLESARQLLE 247
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
GN + ++V++ MK KP TYN +++ G+A + + +Y EM + PN TY
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+L+ A+ R E ++ +++E G++ V +YN L+ + GY A EIF M+
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
C+PD +++ M+ G S+AEA+F EM G P + L+ Y KA+
Sbjct: 385 M-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNV 328
+ + E G+ PD +LN+
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNL 470
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ D R ++ R P ++ +I LYG A +Y EM++ KPN+ TY L
Sbjct: 268 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + + I++++ ++GL P+ Y +L+ +Y RA Y ++ M+ G
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ YN ++ G +A +FE+MK P + +++ S V++ E
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHMLLLSAYSKARDVTKCE 446
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
A+ EM E G EP+ FVL S++ YG+ + + + L + T D L+N+
Sbjct: 447 AIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L++ Y AG G ++ M+ +G +P+ +YN ++D GRA + ++
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G++P ++ LL AY +AR ++ +EM E G++ + N++L + +
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + +I +M++ C D T++ +I I G + E +F E+ E F P++
Sbjct: 475 GQFTKMEKILAEMENGP-CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVT 533
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
TS I Y + + + + + G PD LL+ + + E
Sbjct: 534 WTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVE 583
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ ++ YG AG V+EEMK +G+ P M ++ LL +A+ + + I
Sbjct: 390 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 449
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM++NG+ P+ S+L YGR + EM+ ++ YN L+ +
Sbjct: 450 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 509
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ + E+F ++K +N +PD T++S I S + + +F EM+++G P+
Sbjct: 510 GFLERIEELFVELK-EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 568
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
L+ ++ + V L + + G+T
Sbjct: 569 AKVLLSACSSEEQVEQVTSVLRTMHK-GVT 597
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P++I +N L+D G+ + + +++Y ++ ++ P +TYA L++AY A E
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 200 VYREMKEKGMQ---LSVTLYNTLL-AMCADVGYTDEAFEIFEDMK--------------- 240
V EM+ + + VT+YN + + G T+EA ++F+ MK
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 241 -------------------SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
S C+P+ T+++++ + G +AE +F ++ E G E
Sbjct: 294 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 353
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+++V +L++ Y +A + + +G PD
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 390
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ F+ LI + GN L ++E M GV+ ++TY +L+ + + + + +
Sbjct: 212 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKL 271
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E G+ P+ Y +L+ ++ + + + EM++K + YNTL+
Sbjct: 272 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 331
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G DEA ++ ++M + QPD T++++I+ S +G V +A + NEM+ GF P L
Sbjct: 332 LGRVDEARKLIDEM-TKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 390
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LIQ K + DD + + E GITPDD
Sbjct: 391 TYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 424
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKT 164
PNA ++T+I + + G L++ EM+ G + PN TY ++ + R +
Sbjct: 70 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 129
Query: 165 IYKEMTDNG-LSPNWNTYASLLRAY---GRARYGEDTLSVYRE-MKEKGMQLSVTLYNTL 219
++ EM G + P Y +L+ Y G+ DT +YR+ M E+G+ ++V YN L
Sbjct: 130 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKL----DTALLYRDRMVERGVAMTVATYNLL 185
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G EA+E+ E+M + PD +T++ +I G V +A +F M G
Sbjct: 186 VHALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 244
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ TSLI K + + + + GI PD L+N
Sbjct: 245 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 292
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+K +D R R D ++ LI + T+GN D + EM+ + P+ +TYN L+
Sbjct: 269 DKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 327
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R + + + EMT G+ P+ TY +L+ Y +D L + EM KG
Sbjct: 328 GLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 387
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++ YN L+ G D+A + ++M + PD T+ S+I
Sbjct: 388 TLLTYNALIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLI 431
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
YNT++A G A +I +M+ P+ +T+ ++I+ G+V EA +F+EM
Sbjct: 75 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 134
Query: 276 LEAG-FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L G +P + +LI Y + D + +R+ E G+ L++ + +
Sbjct: 135 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 194
Query: 335 -EELGKLVECVEKSNSKLG---YVVKLLLEEQDIEGDFKKEATELFNSISK 381
E +LVE E L + +L+ EG+ KK A E+F ++S+
Sbjct: 195 GTEAYELVE--EMGGKGLAPDVFTYNILINGHCKEGNVKK-ALEIFENMSR 242
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 112/215 (52%), Gaps = 5/215 (2%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DPN ++ LI + A + + + EEM+ G PN++TYN L+D + + +
Sbjct: 54 DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQD 113
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC 223
+ K+M + G +PN T+ SL+ + + +D + M KGM+ +V Y+ L+ +C
Sbjct: 114 VVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 173
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ EA E+ E+MK+S PD++T+S++I K+ EAE M M +G P+
Sbjct: 174 KSQKFL-EAKEVLEEMKAS-GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ V +S+I + K+ + + + L + + +PD
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 266
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 117/228 (51%), Gaps = 12/228 (5%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F++L+ + GN D + M A G++PN++TY+ L+D + ++++ + K +
Sbjct: 125 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 184
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G++P+ TY++L+ +A E+ + R M G V +Y++++
Sbjct: 185 LEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 244
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
G EA + ++M+ PD T++++I GK++EA+ + ++M E+G P++
Sbjct: 245 SGKLLEAQKTLQEMRKQRK-SPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDV 303
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCGC 324
+++I K+ + + L+R+ + G PD D C C
Sbjct: 304 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 6/213 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+AF+ +I AG+ DG ++ ++++G PN++TY L+ RAK+ + +
Sbjct: 23 PDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKL 79
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM + G PN TY L+ A + V ++M E G +V +N+L+
Sbjct: 80 LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 139
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++ M ++ +P+ T+S++I K EA+ + EM +G P+ F
Sbjct: 140 RGNVDDARKLLGIM-VAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAF 198
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++LI KA + ++ + L R+ G TPD
Sbjct: 199 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
AG+ L + EEMK+ G P+ T+ ++ M A + + G PN T
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANA---GDLDGAMDHLRSMGCDPNVVT 59
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y +L+ A+ RA+ E+ + + EM+E+G ++ YN L+ + A ++ + M
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
P+ TF+S++ RG V +A + M+ G PN+ ++LI K+Q+
Sbjct: 120 EG-GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178
Query: 301 DDVVRALNRLPELGITPD 318
+ L + G+TPD
Sbjct: 179 LEAKEVLEEMKASGVTPD 196
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +S LI + F V EEMKA GV P+ TY+ L+ + +A + + + +
Sbjct: 160 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQM 219
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +G +P+ Y+S++ A+ ++ + +EM+++ V YNT++
Sbjct: 220 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT---------------------------- 257
+G EA I + M+ S + PD T+S++I
Sbjct: 280 LGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 339
Query: 258 --------ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+C C G++ EAE + M AG PN+ T+LI KA++ D+ R +
Sbjct: 340 TYTTIIDGLCKC-GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 398
Query: 310 LPELGITPD 318
+ G P+
Sbjct: 399 MRNAGCPPN 407
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S++I + +G +EM+ P+++TYN ++D + + + + + I
Sbjct: 231 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 290
Query: 167 KEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+M ++G + P+ TY++++ ++ + + M + G V Y T++
Sbjct: 291 DQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 350
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA + + MK + C P+ T++++I+ +C R KV EAE + EM AG PNL
Sbjct: 351 CGRLEEAEYLLQGMKRA-GCAPNVVTYTTLISGLCKAR-KVDEAERVMEEMRNAGCPPNL 408
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+++ + R + + + R+ +
Sbjct: 409 VTYNTMVNGLCVSGRIKEAQQLVQRMKD 436
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ + M G P+++TY ++D + + R + + + + M G +PN TY +L+
Sbjct: 325 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 384
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE-NCQPD 248
+AR ++ V EM+ G ++ YNT++ G EA ++ + MK C PD
Sbjct: 385 KARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPD 444
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEM 275
+ T+ +++ V EAE + +M
Sbjct: 445 AATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKR 158
R ++ D ++T+I G + ++M+ G V P+++TY+ +++ + ++
Sbjct: 259 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDM 318
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + + M G +P+ TY +++ + E+ + + MK G +V Y T
Sbjct: 319 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 378
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
L++ DEA + E+M+++ C P+ T+++M+ G++ EA+ + M
Sbjct: 379 LISGLCKARKVDEAERVMEEMRNA-GCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 434
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 116/235 (49%), Gaps = 7/235 (2%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R N +++ F++LI+ YG AG F + V+ MK++GV P+++T+N+LL + +
Sbjct: 146 RRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRG 205
Query: 158 RPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R ++++ EM G++P+ T+ L+R + + ++ ++EM + Y
Sbjct: 206 RTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTY 265
Query: 217 NTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
NTL+ G + A + M K S N PD T+++++ + ++ EA +F EM
Sbjct: 266 NTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEM 325
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL-NRLPELGITPDDRFCGCLLNVM 329
+ G +PN +LI+ + Q+ D + + L G PD C LN +
Sbjct: 326 VSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDT----CTLNTL 376
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI+ + D ++EM P+++TYN L+D + RA + +
Sbjct: 226 DTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVV 285
Query: 167 KEMT--DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
M L+P+ TY +L+R Y ++ L V+ EM KG++ + YNTL+
Sbjct: 286 NGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLC 345
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+V D+ +IFE PD+ T ++++ G +++A +F +M+ P+
Sbjct: 346 EVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDS 405
Query: 285 FVLTSLIQ 292
+ LI+
Sbjct: 406 ATYSVLIR 413
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 3/175 (1%)
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTI---YKEMTDNGLSPNWNTYASLLRAYGRARY 193
+G N +Y +L+ +GRA+ + K ++ + + SL+R+YG+A
Sbjct: 112 LGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGL 171
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++++ V+ MK G+ SV +N+LL + G T+ A +F++M S+ PD++TF+
Sbjct: 172 FQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFN 231
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+I V E F EM +P+L +L+ +A + + +N
Sbjct: 232 ILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVN 286
>gi|302799860|ref|XP_002981688.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
gi|300150520|gb|EFJ17170.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
Length = 289
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ +DP +I + G A +FD + V+ I VK + YN LL +A + V
Sbjct: 7 FHLDPYLRIHIIDVLGKASSFDIAVQVFNHFIKISVKKDAGMYNALLHAFCKAGKLEAVD 66
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++++M + + PN +Y L+ +Y +A + +SV++EM +G++ SV YN L+A
Sbjct: 67 DLFRDMKQS-IRPNHLSYNILMHSYVKAGHELTKVVSVFKEMYLRGVKASVASYNILIAA 125
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA---MFNEMLEAG 279
CA EA F +MK ++ +P+ T+SS+I + G V A + EM++A
Sbjct: 126 CATGKQAWEARVFFSNMK-KQDLEPNVITYSSLINVYVASGDVGNCAAALDVLREMVKAE 184
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
PN+ + L+ YG+ + ++ ++ + +LGI P L+ + +++ L +
Sbjct: 185 VMPNVTTFSCLLHGYGQEGKIEEAMKIFQTMKDLGIEPSAITFNILMTMYSKSGHHALAQ 244
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 9/215 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGN-FDGCLNVYEEMKAIGVKPN 142
+A KL+ + D R+ K I PN +++ L+ Y AG+ ++V++EM GVK +
Sbjct: 58 KAGKLE--AVDDLFRDMKQSIRPNHLSYNILMHSYVKAGHELTKVVSVFKEMYLRGVKAS 115
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLS 199
+ +YN L+ K+ W+ + + M L PN TY+SL+ Y G L
Sbjct: 116 VASYNILIAACATGKQAWEARVFFSNMKKQDLEPNVITYSSLINVYVASGDVGNCAAALD 175
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
V REM + + +VT ++ LL G +EA +IF+ MK +P + TF+ ++T+
Sbjct: 176 VLREMVKAEVMPNVTTFSCLLHGYGQEGKIEEAMKIFQTMKDL-GIEPSAITFNILMTMY 234
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
S G + A++ F+EM+E+G EP SL+ C+
Sbjct: 235 SKSGHHALAQSCFHEMIESGLEPTYVSFLSLMYCF 269
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 102 EKWRIDPNA--FSTLIKLY---GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
+K ++PN +S+LI +Y G GN L+V EM V PN+ T++ LL G+
Sbjct: 143 KKQDLEPNVITYSSLINVYVASGDVGNCAAALDVLREMVKAEVMPNVTTFSCLLHGYGQE 202
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + I++ M D G+ P+ T+ L+ Y ++ + S + EM E G++ + +
Sbjct: 203 GKIEEAMKIFQTMKDLGIEPSAITFNILMTMYSKSGHHALAQSCFHEMIESGLEPTYVSF 262
Query: 217 NTLLAMCADVGYTDEA 232
+L+ VG E
Sbjct: 263 LSLMYCFKSVGAYKEV 278
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 138/286 (48%), Gaps = 39/286 (13%)
Query: 86 RASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+A K+++ K +D R E D +++TL+ Y AG L+V+ EM G+ P++
Sbjct: 232 KAGKMEDARKVFDEMMR-EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290
Query: 144 ITYNNLLDTMGRAKR-PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+T+ +L+ M +A W V T+ ++M + GL N T+ +L+ + + + +D L R
Sbjct: 291 VTFTSLIHVMCKAGNLEWAV-TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS-----------------ENC 245
M++ ++ SV YN L+ VG DEA E+ +M++ +NC
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409
Query: 246 Q-----------------PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
PD+ T+SS+I + ++S+A +F M++ G +P+ F T
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
SLI + K + + +++ + G+ PD L+N ++++ +
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 3/214 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI+ G+ L++ +M+ G PN++TYN L+ RA +
Sbjct: 146 VAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 205
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M D GL PN T+ S++ +A ED V+ EM +G+ YNTL+
Sbjct: 206 RLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGY 265
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + EA +F +M + + PD TF+S+I + G + A + +M E G + N
Sbjct: 266 CKAGCSHEALSVFAEM-TQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMN 324
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
T+LI + K DD + A+ + + I P
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKP 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TL+ + AG DG + M G+KPN++T+N++++ M +A + + +
Sbjct: 183 PNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKV 242
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ EM GL+P+ +Y +L+ Y +A + LSV+ EM +KG+ V + +L+ +
Sbjct: 243 FDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCK 302
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A + M+ Q + TF+++I +G + +A M + +P++
Sbjct: 303 AGNLEWAVTLVRQMR-ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVV 361
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI Y R D+ L+ + G+ PD
Sbjct: 362 CYNALINGYCMVGRMDEARELLHEMEAKGLKPD 394
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
P F +LIK Y + N G P+++ YN +L + A + +
Sbjct: 80 PRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYNAVLLALSDASL-TSARRFF 138
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M +G++PN TY L+RA + ++ LS+ R+M+ G +V YNTL+A
Sbjct: 139 DSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRA 198
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A E M +P+ TF+SM+ GK+ +A +F+EM+ G P+
Sbjct: 199 GEVDGA-ERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVS 257
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+L+ Y KA + + + + + GI PD L++VM + E
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 307
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTM-GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++ M + GV PN+ TYN L+ + GR R + +I ++M G PN TY +L+ A+
Sbjct: 138 FDSMLSDGVAPNVYTYNILIRALCGRGHRK-EALSILRDMRGAGCGPNVVTYNTLVAAFF 196
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
RA + + M + G++ ++ +N+++ G ++A ++F++M E PD
Sbjct: 197 RAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMM-REGLAPDG 255
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++++++ G EA ++F EM + G P++ TSLI KA + V + +
Sbjct: 256 VSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQ 315
Query: 310 LPELGI 315
+ E G+
Sbjct: 316 MRERGL 321
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 141/321 (43%), Gaps = 35/321 (10%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
R + +E ++ A+ K D +ST+I Y + + ++M GV P+ IT
Sbjct: 375 RMDEARELLHEMEAKGLKP--DVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 432
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y++L+ + KR ++K M GL P+ TY SL+ + + E LS++ +M
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMV 492
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS----- 260
+ G+ V Y+ L+ + EA ++ + E P + + +++ C
Sbjct: 493 KAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPI-PANTKYDALMHCCRKAELK 551
Query: 261 ----------CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN-- 308
+G ++EA+ ++ ML+ + + V + LI + +A +V++AL+
Sbjct: 552 SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRA---GNVMKALSFH 608
Query: 309 -RLPELGITPDDR-----FCGCLLNVMTQTPKEELGKLVECVEKSNSKLG-YVVKLLLEE 361
++ + G P+ G N M + + +L+ C ++++ ++ L L E
Sbjct: 609 KQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNE 668
Query: 362 QDIEGDFKKEATELFNSISKD 382
+++ ++ + ++KD
Sbjct: 669 GNVDA-----VLDVLHGMAKD 684
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 13/226 (5%)
Query: 108 PNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ + GT AG D + + +EM G+ PN++TY ++D + + + + +
Sbjct: 338 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV 397
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
M G+ N Y +L+ + E L + +MK KGM+L V+LY TL+ +C
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCK 457
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D DEA + M +P++ +++++ GK SEA A+ +++L++GF+PN+
Sbjct: 458 D-QKVDEAKSLLHKMAGC-GLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNV 515
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
+LI KA + + N++ ELG+ P+ D FC
Sbjct: 516 VTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFC 561
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 3/220 (1%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
AR + R+ PN + L A N G L V + V PN+ T+N ++D + +
Sbjct: 158 ARVRQLRVPPNTRTCNHILLRLARNRQGGL-VRRLFDLLPV-PNVFTFNIVIDFLCKEGE 215
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + ++ M G SP+ TY SL+ YG+ E+ + EM++ G V YN
Sbjct: 216 LVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNA 275
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ + G ++A+ F +MK + + TFS+ + G V EA +F +M
Sbjct: 276 LINCFSKFGRMEKAYSYFGEMK-RQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVR 334
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G PN F TSL+ KA R DD + L+ + G+ P+
Sbjct: 335 GMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 8/208 (3%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ +I G ++ MKA+G P+++TYN+L+D G+ +V+ +
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
EM +G + + TY +L+ + + E S + EMK +G+ +V ++T + A C
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G EA ++F M+ P+ +T++S++ G++ +A + +EM+ G PN+
Sbjct: 318 E-GLVQEAMKLFAQMR-VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375
Query: 285 FVLTSLIQCY---GKAQRTDDVVRALNR 309
T ++ GK D+V+ + R
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMER 403
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 79 WVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG 138
++N S RA L + +N+ +D + + TLI D ++ +M G
Sbjct: 421 FMNNNSERALDLLNQ-----MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCG 475
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
++PN + Y ++D + +A + + + ++ D+G PN TY +L+ +A + +
Sbjct: 476 LRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAI 535
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
S + +M+E G+ +V Y L+ +G ++A + +M + D ++S+I
Sbjct: 536 SHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEM-IDKGMSLDKVVYTSLIDG 594
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + +A A+ +M+E+G + +L+ T I + + L+ + GITPD
Sbjct: 595 YMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPD 654
Query: 319 DRFCGCLL 326
CL+
Sbjct: 655 KTVYNCLI 662
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI YG G+ + + EM+ G +++TYN L++ + R + + +
Sbjct: 234 DVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYF 293
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ N T+++ + A+ + ++ + ++ +M+ +GM + Y +L+
Sbjct: 294 GEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKA 353
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A + ++M + P+ T++ M+ GKV+EA+ + + M G + N +
Sbjct: 354 GRLDDAIVLLDEM-VHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELL 412
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
T+LI + ++ + LN++ G+ D G L+
Sbjct: 413 YTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLI 452
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + LI AG+ ++ + +M+ +G+ PN+ Y L+D + + +
Sbjct: 513 PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHL 572
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM D G+S + Y SL+ Y + +D ++ +M E G+QL + Y ++ +
Sbjct: 573 MNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCN 632
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+ EA + +M + PD ++ +I G + EA ++ NEM
Sbjct: 633 MNMMQEARGVLSEMIGT-GITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+DPN A++ LI + G+ + +++ EM G+ + + Y +L+D +
Sbjct: 546 LDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAF 605
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +M ++GL + Y + + ++ V EM G+ T+YN L+
Sbjct: 606 ALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKY 665
Query: 224 ADVGYTDEAFEIFEDMKS 241
+G +EA + +M+S
Sbjct: 666 QKLGNMEEASSLQNEMES 683
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P+ +TF+ +I G++ EA A+F M G P++ SLI YGK ++V +
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
++ + + G D L+N ++ + E
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRME 287
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ F+ LI + GN L ++E M GV+ ++TY L+ + + + + +
Sbjct: 285 PDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKL 344
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E G+ P+ Y +L+ ++ + + + EM++K + YNTL+
Sbjct: 345 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 404
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G DEA ++ ++M + QPD T++++I+ S +G V +A + NEM+ GF P L
Sbjct: 405 LGRVDEARKLIDEM-TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL 463
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LIQ K + DD + + E GITPDD
Sbjct: 464 TYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 497
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKT 164
PNA ++T+I + + G L++ EM+ G + PN TY ++ + R +
Sbjct: 143 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 202
Query: 165 IYKEMTDNG-LSPNWNTYASLLRAY---GRARYGEDTLSVYRE-MKEKGMQLSVTLYNTL 219
++ EM G + P Y +L+ Y G+ DT +YR+ M E+G+ ++V YN L
Sbjct: 203 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKL----DTALLYRDRMVERGVAMTVATYNLL 258
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G EA+E+ E+M + PD +T++ +I G V +A +F M G
Sbjct: 259 VHALFMDGRGTEAYELVEEM-GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 317
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ T+LI K + + + + GI PD L+N
Sbjct: 318 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 365
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+K +D R R D ++ LI + T+GN D + EM+ + P+ +TYN L+
Sbjct: 342 DKLFDEAVR-RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 400
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R + + + EMT+ G+ P+ TY +L+ Y +D L + EM KG
Sbjct: 401 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 460
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++ YN L+ G D+A + ++M + PD T+ S+I
Sbjct: 461 TLLTYNALIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLI 504
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPWQVKTIYK 167
++ LI G +++E G++P+++ YN L++ T G R ++ I
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE---IMG 381
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM ++P+ TY +L+R ++ + EM E+G+Q + YNTL++ + G
Sbjct: 382 EMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKG 441
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A I +M + + P T++++I G+ +AE M EM+E G P+
Sbjct: 442 DVKDALRIRNEMMN-KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 500
Query: 288 TSLIQ 292
SLI+
Sbjct: 501 ISLIE 505
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 16/259 (6%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L +Y MK++ + + + + LL + A ++ +M L T+ +LR
Sbjct: 68 LRLYSRMKSLSLPISTASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRH 123
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
A L + R+M + YNT++A G A +I +M+ P
Sbjct: 124 LCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAP 179
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQCYGKAQRTDDVVRA 306
+ +T+ ++I+ G+V EA +F+EML G +P + +LI Y + D +
Sbjct: 180 NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLY 239
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLG---YVVKLLLEEQ 362
+R+ E G+ L++ + + E +LVE E L + +L+
Sbjct: 240 RDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE--EMGGKGLAPDVFTYNILINGH 297
Query: 363 DIEGDFKKEATELFNSISK 381
EG+ KK A E+F ++S+
Sbjct: 298 CKEGNVKK-ALEIFENMSR 315
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI + A D ++E M + G +PN +TYN LL + + +P + ++
Sbjct: 226 DVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 285
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G P+ TY +LL + E + V+ EM KG V YN LL
Sbjct: 286 RKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 345
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM-LEAGFEPNLF 285
G EA ++F+ M S E C+PD+ + + MI S ++ +A +F M + G P+L
Sbjct: 346 GKPGEARQLFQVMVSRE-CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLV 404
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
SLI QR + ++ + L ++PD LL M
Sbjct: 405 TYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 5/211 (2%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
NAF + G + G VYEEM + G P++ITY+ L+ A++ Q +++
Sbjct: 196 NAFLNGLMRKGRIADAQG---VYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G PN TY LL + ++ ++R+M E+G Y TLL +VG
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+F++M S + PD ++ ++ GK EA +F M+ +P+
Sbjct: 313 IEQAVEVFDEMVSKGH-DPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHN 371
Query: 289 SLIQCYGKAQRTDDVVRALNRLPE-LGITPD 318
+I KA+R DD V R+ + G +PD
Sbjct: 372 IMIDGLSKAKRLDDAVEVFERMEQDHGCSPD 402
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S LI + +Y++M + PN+ TYN L+ + R R + +Y
Sbjct: 156 DVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVY 215
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G SP+ TY++L+ + AR + ++ M +G + + YN LL
Sbjct: 216 EEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKE 275
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA E+F M C PD T+++++ GK+ +A +F+EM+ G +P++
Sbjct: 276 SKPDEAHELFRKM-VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 334
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L++ + +A + + + + PD
Sbjct: 335 YNCLLKGFFRAGKPGEARQLFQVMVSRECKPD 366
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM--T 170
++I+ AG D L++ E M G P+M T++ L++ + +A + + + + M T
Sbjct: 54 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLLAMCADVGYT 229
+ + + +Y SLL + +A+ +++ M E+ + V Y+ L+ +
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A ++++ M NC P+ T+++ + +G++++A+ ++ EM+ AG P++ ++
Sbjct: 174 GRAEKLYKQMIDL-NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-----EELGKLVE 342
LI + A++ D + G P+ CLL+ + + K E K+VE
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 108/208 (51%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ + G+ + C + EM+ + V PN+IT+N LL + R + +Y+ +
Sbjct: 119 YNTLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRIL 178
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D GL P TY L++ Y RA ++ + V+ EM+ G + + +Y+ ++++ G +
Sbjct: 179 DAGLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAE 238
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F ++ ++ P+ T+ +I +GK+ E A FNEML +G P+L + +
Sbjct: 239 EAALVFRQLQ-NDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVM 297
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ YG+ + R+ GI+P+
Sbjct: 298 MGAYGRYGHSVQAAILFRRMQAQGISPN 325
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 129/246 (52%), Gaps = 10/246 (4%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA--- 156
+K R+ PN ++ ++ + G AG +++EM + GV+ + ++N+++ R
Sbjct: 2 QKGRLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLF 61
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS-VYREMKEKGMQLSVTL 215
K+ W+ +Y++M ++G+ + T ++LL G+ + +T ++ ++KE G+ V
Sbjct: 62 KKAWR---MYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVET 118
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
YNTLL++ + G+T+ E+ +M+ E P+ TF++++ + G++ EA ++ +
Sbjct: 119 YNTLLSVLSRGGHTERCKELEIEMQRLEVV-PNIITFNTLLMMHVQGGRLKEAAEVYQRI 177
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
L+AG +P + T L+Q Y +A + + + + +G PD +++V +
Sbjct: 178 LDAGLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSA 237
Query: 336 ELGKLV 341
E LV
Sbjct: 238 EEAALV 243
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 114/235 (48%), Gaps = 3/235 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKT 164
+ ++F+++I Y G F +YE+M G++ + IT + LL +G+ + P + +
Sbjct: 43 VGLHSFNSMIGAYARKGLFKKAWRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEK 102
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I+ ++ +NG+ P TY +LL R + E + EM+ + ++ +NTLL M
Sbjct: 103 IFSKIKENGILPRVETYNTLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHV 162
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA E+++ + + +P T++ ++ + K EA +F EM G +P+L
Sbjct: 163 QGGRLKEAAEVYQRILDA-GLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDL 221
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT-QTPKEELG 338
+ + +I YGKA ++ +L G P+ CL+ Q +E+G
Sbjct: 222 MIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIG 276
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+ + ++ + PN F+TL+ ++ G VY+ + G+KP ++TY L
Sbjct: 133 ERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVVTYTGL 192
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ RA + + ++ EM G P+ Y+ ++ YG+A E+ V+R+++ G
Sbjct: 193 VQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGY 252
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+V + L+ G E F +M +S C PD ++ M+ G +A
Sbjct: 253 IPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLAS-GCLPDLTLYNVMMGAYGRYGHSVQAA 311
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F M G PN ++IQ Y +++ D L+++ G +PD
Sbjct: 312 ILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPD 360
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++ ++K G+ P + TYN LL + R + K + EM + PN T+ +LL +
Sbjct: 103 IFSKIKENGILPRVETYNTLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHV 162
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ VY+ + + G++ +V Y L+ M EA E+F +M+ C+PD
Sbjct: 163 QGGRLKEAAEVYQRILDAGLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRV-GCKPDL 221
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+S MI++ G EA +F ++ G+ PN+ LIQ +G + ++ N
Sbjct: 222 MIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNE 281
Query: 310 LPELGITPD 318
+ G PD
Sbjct: 282 MLASGCLPD 290
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 86 RASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RASK KE R + D +S +I +YG AG+ + V+ +++ G PN++
Sbjct: 198 RASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVV 257
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T+ L+ G + ++ + EM +G P+ Y ++ AYGR + ++R M
Sbjct: 258 TWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRM 317
Query: 205 KEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ +G+ + Y+T++ A C D +I D + PD
Sbjct: 318 QAQGISPNAVSYDTMIQAYCHSKQAADA--QIVLDQMTRAGFSPD 360
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ ++ YG G+ ++ M+A G+ PN ++Y+ ++ +K+ + +
Sbjct: 290 DLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVL 349
Query: 167 KEMTDNGLSPNWNTYASL 184
+MT G SP+ ++ A L
Sbjct: 350 DQMTRAGFSPDRSSRAML 367
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+++I Y AG + + VY +M A G+ PN +TYN L++ G+ +
Sbjct: 151 PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEV 210
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y++MT P+ T++SL+ Y R +D L ++ +M + +Q +V ++ ++
Sbjct: 211 YQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCK 270
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+DEA + ++ + P ++ ++ +I +C C GKV EA + M E G P+
Sbjct: 271 QNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKC-GKVDEANLIRKGMEEKGCRPDK 329
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ T LI Y R + + + + E G +PD C ++ + +
Sbjct: 330 YTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 377
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 87/227 (38%), Gaps = 9/227 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM-GRAKRPWQVKTI 165
D S L+ A D + + G + YN L+ ++ GR + V
Sbjct: 10 DARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALF 69
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ + D SP+ ++ +++ R + L + M E G +N L+
Sbjct: 70 ERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCR 129
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
E+ ++ C P+ TF+S+I+ GK+ +A A++N+M+ +G PN
Sbjct: 130 TNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTV 189
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCGC 324
LI YGK V ++ L PD D +C C
Sbjct: 190 TYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRC 236
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 14/166 (8%)
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
T G SP+ + L+ + A + + ++ + E G ++ YN L++ G
Sbjct: 3 THYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRV 62
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ +FE PD W+F+ +I G+V +A + M E G P+
Sbjct: 63 HDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNI 122
Query: 290 LIQCYGKAQRTDDVVRA---LNRLPELGITPDDRFCGCLLNVMTQT 332
L+ RT++V R L RL G+ C+ NV+T T
Sbjct: 123 LVD---GLCRTNEVSRGHEVLRRLQRDGV--------CMPNVVTFT 157
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%), Gaps = 3/210 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAI--GVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
F +IK G + V +EM I G+ P++IT+N++LD + + +R ++K
Sbjct: 174 FGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 233
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ G PN TY++L+ + ++ L + +M E G + + Y+T++ VG
Sbjct: 234 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR 293
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A + M+ + C PD+ T++++I R ++ EA + EMLEAGF P++ T
Sbjct: 294 MEDAVVVLRQMRDA-GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 352
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L ++ R D+ V L+ + G P+
Sbjct: 353 TLCHGLCRSGRFDEAVEILDYMAARGCAPN 382
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA R + +STLI D L + +M +G + N +TY+ ++D + +
Sbjct: 233 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 292
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + ++M D G P+ TY +L+ + + + + + + REM E G SV Y
Sbjct: 293 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 352
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML- 276
TL G DEA EI + M ++ C P++ T+SS++ G+V+EA F +M
Sbjct: 353 TLCHGLCRSGRFDEAVEILDYM-AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 411
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ P++ ++LI KA + D+ L R+ G PD
Sbjct: 412 DEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPD 453
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 9/251 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + LI G +++EE +A G P ++TYN ++D + + R T+Y
Sbjct: 29 DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLY 88
Query: 167 KEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+M + G P TY++L+ R + + EM +G + YNTL+
Sbjct: 89 DDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLG 148
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE--MLEAGFEPN 283
G + EAF + E M ++ C P+ TF +I G++ A + +E M+E+G P+
Sbjct: 149 QGRSKEAFSLLEQM-AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPD 207
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LG 338
+ S++ K QR D R E G P+ L++ +++ K + L
Sbjct: 208 VITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 267
Query: 339 KLVECVEKSNS 349
K+VE ++N+
Sbjct: 268 KMVELGCRANT 278
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 8/226 (3%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + +ST++ G + + V +M+ G P+ +TYN L+D + +R +
Sbjct: 275 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 334
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +EM + G P+ TY +L R+ ++ + + M +G + Y++++
Sbjct: 335 LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 394
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA FE M E P +S++I GK+ EA M+ AG P++
Sbjct: 395 KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDV 454
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
+ LI A R D + + E G PD DR C
Sbjct: 455 VTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLC 500
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 5/227 (2%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD A + +R +STLI D + EEM G PN +TYN L++ +
Sbjct: 88 YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE--MKEKGMQLS 212
R + ++ ++M NG P T+ +++ + E V E M E G+
Sbjct: 148 GQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPD 207
Query: 213 VTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
V +N++L +C + D A +F+ C+P+ T+S++I S K+ EA +
Sbjct: 208 VITFNSVLDGLCKEQRILD-AHNVFK-RALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 265
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+M+E G N ++++ K R +D V L ++ + G PD
Sbjct: 266 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 312
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 2/242 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + + + EM G P+++TY L + R+ R + I
Sbjct: 312 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 371
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLLAMCAD 225
M G +PN TY+S++ +A + L + +M +++ + V Y+ L+
Sbjct: 372 DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 431
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA+E E M + PD TFS +I G++ +F M E G P++
Sbjct: 432 AGKIDEAYEFLERMIRAGRI-PDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMV 490
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+L+ +A R D+ ++ G++PD +++ + + ++E K ++ E
Sbjct: 491 TYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEE 550
Query: 346 KS 347
S
Sbjct: 551 NS 552
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D + ++++M + P+++TY L+D +G+ +R + +++E G P TY ++
Sbjct: 12 DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 71
Query: 185 LRAYGRARYGEDTLSVYREMK-EKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSS 242
+ + E+ L++Y +M G + +V Y+TL+ +C D D+ ++ E+M +
Sbjct: 72 IDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRD-HEVDKGCKLLEEM-AG 129
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
C P++ T+++++ +G+ EA ++ +M G P L +I+ K +
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189
Query: 303 VVRALNR--LPELGITPD 318
R ++ + E G++PD
Sbjct: 190 AFRVVDEMFMIESGLSPD 207
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 79/170 (46%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
++D + ++++ + T++K+M D + P+ TY +L+ G+ R ++ ++ E + KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+V YNT++ G + A +++DM +P T+S++I +V +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EM G PN +L+ R+ + L ++ G P+
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPE 170
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
++ AR+E A+S LI AG D E M G P+++T++ L++ +
Sbjct: 406 FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
A R +++ M + G P+ TYA+L+ RA ++ ++++M+ G+ +
Sbjct: 466 DAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRS 525
Query: 215 LYNTLLAMCADVGYTDEAFEI 235
T++ +V ++A I
Sbjct: 526 TRRTMIHGLLEVNRDEDAKRI 546
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Vitis vinifera]
Length = 1071
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R+ + +D A++T I AG ++Y+ M ++GV P++ TYN ++ GR +
Sbjct: 769 RSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRGR 828
Query: 158 RPWQVKTIYKEM--TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ + ++ + + G+S + TY +L+ YG+A + ++REM+E+G++
Sbjct: 829 KLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVS 888
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
YN ++ + A G EA E+F+ M + C PDS T+ ++I + K EAE M
Sbjct: 889 YNIMINVYATAGLHHEAQELFQAM-LRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSM 947
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G P+ L+ + KA T++ R + L G++PD
Sbjct: 948 QNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPD 990
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 148/305 (48%), Gaps = 12/305 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A T++ Y G L+ Y ++ G+ P++ +N +L ++ + +V ++
Sbjct: 226 DEVACGTMLCTYARWGRHKAMLSFYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDLW 285
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM D G+ PN TY ++ + + E++ + EMK G Y+ L+++ +
Sbjct: 286 REMVDKGVVPNSFTYTVVISSLVKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKT 345
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA +++EDM+ P ++T +S++T+ G S A ++F+EM + + +
Sbjct: 346 GNRDEAIKLYEDMR-YRRIVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVI 404
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
LI+ YGK +D + +LG+ +++ + V + E+ ++E +
Sbjct: 405 YGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMR 464
Query: 346 KSN---SKLGYVVKLLLEEQDIEGDF-KKEATELFNSISKD--VKKAYCNCLIDLCVNLN 399
N S+ Y+V LL+ ++ D EAT F ++SK CN +++L + L+
Sbjct: 465 SRNIWFSRFSYIV--LLQCYVMKEDLASAEAT--FQALSKTGLPDAGSCNDMLNLYIKLD 520
Query: 400 LLENA 404
LLE A
Sbjct: 521 LLEKA 525
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 2/210 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LI YG AG ++ EM+ G+KP ++YN +++ A + + +
Sbjct: 849 LDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQEL 908
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M +G SP+ TY +L+RAY ++ + M+ +G+ S +N LL+ A
Sbjct: 909 FQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAK 968
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G+T+EA ++ + S+ PD + +M+ G V + F ++ E+ EP+ F
Sbjct: 969 AGFTEEAERVYHTLLSA-GLSPDVACYRTMLRGYLDYGCVEKGITFFEQIRES-VEPDRF 1026
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+++S + Y A + + L+ + LGI
Sbjct: 1027 IMSSAVHFYKLAGKELEAEGILDSMKSLGI 1056
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ ++I Y G + ++YEE+ G++ +++ + ++ + + + + + +
Sbjct: 712 YISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSF 771
Query: 171 DNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
++GL + +NT+ + + GR + S+Y M G+ S+ YNT++++
Sbjct: 772 EDGLELDTVAYNTFINAMLGAGRLHFAN---SIYDRMVSLGVAPSIQTYNTMISVYGRGR 828
Query: 228 YTDEAFEIFEDMK-SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D+A E+F + S D T++++I+ GK EA +F EM E G +P
Sbjct: 829 KLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVS 888
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+I Y A + + G +PD L+ TQ+ K
Sbjct: 889 YNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFK 936
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P++I Y LL G+ + + + EM + G P+ ++L Y R + LS
Sbjct: 189 QPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLS 248
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
Y ++E+G+ S+ ++N +L+ + +++ +M + P+S+T++ +I+
Sbjct: 249 FYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREM-VDKGVVPNSFTYTVVISSL 307
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
G V E+ F EM GF P + LI K D+ ++ + I P +
Sbjct: 308 VKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSN 367
Query: 320 RFCGCLLNV 328
C LL +
Sbjct: 368 YTCASLLTL 376
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A + F MK + QP ++ ++ + GK+ AE F EMLEAG EP+ ++
Sbjct: 174 QARDFFGWMKLQLSYQPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTM 233
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
+ Y + R ++ + + E GI P
Sbjct: 234 LCTYARWGRHKAMLSFYSAVQERGIIP 260
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 5/266 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+ Y G +N+ EM G +++TYN +L + + K + ++
Sbjct: 399 DNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 458
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EMT+ GL P+ T L+ + + ++ + ++++MKEK ++L V YNTLL V
Sbjct: 459 NEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKV 518
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A EI+ DM S E P +FS ++ +G +SEA +++EM+ +P + +
Sbjct: 519 GDIDTAKEIWADMVSKE-ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMI 577
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-LGKLVECVE 345
S+I+ Y ++ D L ++ G PD C ++ KEE + K V+
Sbjct: 578 CNSMIKGYCRSGNASDGEIFLEKMISEGFVPD---CISYNTLIYGFVKEENMSKAFGLVK 634
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKE 371
K K G +V + I F +E
Sbjct: 635 KMEEKQGGLVPDVFTYNSILHGFCRE 660
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 183/415 (44%), Gaps = 53/415 (12%)
Query: 86 RASKLKEKSYD--TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+A KL+E +Y+ T R++ + + +A + LI G + +Y+E+ GV N+
Sbjct: 167 QARKLRE-AYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNV 225
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
T N +++ + + + +V T E+ + G+ P+ TY +L+ AY E+ +
Sbjct: 226 YTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHA 285
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M KG V YNT++ G + A E+F +M S PDS T+ S++ +G
Sbjct: 286 MPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKG 344
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR--- 320
E E +F++M P+L +S++ + ++ D + N + E G+ PD+
Sbjct: 345 DAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 404
Query: 321 -----FC------------------GCLLNVMTQT-------PKEELGK----LVECVEK 346
+C GC ++V+T ++ LG+ E E+
Sbjct: 405 ILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 464
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
Y + +L++ G+ + A ELF + + K +D+ LL+ K
Sbjct: 465 GLFPDSYTLTILIDGHCKLGNLQN-AMELFKKMKEKRIK------LDVVTYNTLLDGFGK 517
Query: 407 LLELGLTLEVYTDIQSR----SPTQWSLHLKSL-SLGAALTALHIWINDLSKALE 456
+ ++ E++ D+ S+ +P +S+ + +L S G A +W +SK+++
Sbjct: 518 VGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIK 572
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ + ++ ++D ++TL+ +G G+ D ++ +M + + P I+++ L++ +
Sbjct: 495 KMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKG 554
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ EM + P S+++ Y R+ D +M +G YN
Sbjct: 555 HLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYN 614
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
TL+ +AF + + M+ + PD +T++S++ ++ EAEA+ +M+
Sbjct: 615 TLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI 674
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
E G P+ TSLI + + R + + + G +PDD+F
Sbjct: 675 ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 103/223 (46%), Gaps = 3/223 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + LI + GN + ++++MK +K +++TYN LLD G+ K I+
Sbjct: 469 DSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIW 528
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + P +++ L+ A + + V+ EM K ++ +V + N+++
Sbjct: 529 ADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRS 588
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE--AGFEPNL 284
G + EIF + SE PD +++++I +S+A + +M E G P++
Sbjct: 589 GNASDG-EIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDV 647
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
F S++ + + + + L ++ E G+ PD L+N
Sbjct: 648 FTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLIN 690
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 177 NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF 236
N + + L+R + +AR + + ++ KG +S+ N L+ +G+ + A+ I+
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
+++ S + +T + M+ GK+ + +E+ E G P++ +LI Y
Sbjct: 214 QEI-SRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSS 272
Query: 297 AQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
++ ++ +P G +P ++N + + K E K V
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEV 317
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ G + + L V EEM G + +TYN ++ + +++R Q +Y
Sbjct: 868 DEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLY 927
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G SP TY LL +A ED +++ EM E G + + T+YN LL
Sbjct: 928 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 987
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G T++ +F+DM + PD +++ +I T+C G++++ F ++LE G EP+L
Sbjct: 988 GNTEKVCHLFQDM-VDQGINPDIKSYTIIIDTLCKA-GQLNDGLTYFRQLLEMGLEPDLI 1045
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVE 342
LI GK++R ++ V N + + GI P+ + +L++ E GK+ E
Sbjct: 1046 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1103
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P + L+ AG + N++ EM G K N YN LL+ A +V +++
Sbjct: 939 PCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQ 998
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
+M D G++P+ +Y ++ +A D L+ +R++ E G++ + YN L+
Sbjct: 999 DMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSK 1058
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+EA +F +M+ + P+ +T++S+I GK +EA M+ E+L G++PN+F
Sbjct: 1059 RLEEAVSLFNEMQK-KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1117
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
+LI+ Y + TD A R+ G P+ C
Sbjct: 1118 NALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTC 1152
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 2/240 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ +I G L +++EMK G+ P +YN+L+ +A R ++K M
Sbjct: 416 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYM 475
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+G PN T+ + YG++ + Y MK KG+ V N +L A G
Sbjct: 476 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRL 535
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A +F ++K+ PD+ T++ MI CS K EA +F +M+E P++ V+ S
Sbjct: 536 GMAKRVFHELKAM-GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNS 594
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI KA R D+ + +L E+ + P D LL + + K +E+ L+E + SN
Sbjct: 595 LIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 654
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Query: 108 PNAFSTL--IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ + I YG +G + YE MK+ G+ P+++ N +L + ++ R K +
Sbjct: 482 PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 541
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ G+SP+ TY +++ +A ++ + ++ +M E V + N+L+
Sbjct: 542 FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYK 601
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA++IF +K N +P T+++++ GKV E + EM + + PNL
Sbjct: 602 AGRGDEAWQIFYQLKEM-NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 660
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ C K +D + L + G PD
Sbjct: 661 TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 693
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S I++ G A FD + EM+ G KP++IT+ L+ + A R
Sbjct: 301 EAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRI 360
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M + P+ TY +LL + + + ++ MK G +V Y +
Sbjct: 361 SDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAV 420
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ VG EA E+F++MK + P+ ++++S+I+ + +A +F M G
Sbjct: 421 IDALCQVGRVFEALEMFDEMK-QKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHG 479
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+PN + I YGK+ + ++ + GI PD
Sbjct: 480 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 518
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S L+ +G + + L + EM+A GVKPN+ +Y + +G+A+R + I EM
Sbjct: 277 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEME 336
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G P+ T+ L++ A D V+ +MK+ + Y TLL AD G +
Sbjct: 337 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQ 396
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EI+ MK ++ + ++++I G+V EA MF+EM + G P + SL
Sbjct: 397 SVMEIWNAMK-ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 455
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I + KA R D + + G P+
Sbjct: 456 ISGFLKADRFGDALELFKYMDIHGPKPN 483
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L VY+ M GV P++ TY+ L+ G+ + V + +EM +G+ PN +Y +R
Sbjct: 259 LEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 318
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
G+AR ++ + EM+ +G + V + L+ + D G +A ++F MK S+ +P
Sbjct: 319 LGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ-KP 377
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T+ +++ + G+ ++N M G+ N+ T++I + R + +
Sbjct: 378 DRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 437
Query: 308 NRLPELGITPD 318
+ + + GI P+
Sbjct: 438 DEMKQKGIVPE 448
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ + G G MK G+ N TYN L+ + ++ + +YK M
Sbjct: 207 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMM 266
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ TY+ L+ A+G+ R E L + REM+ G++ +V Y + + D
Sbjct: 267 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFD 326
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+ I +M+ +E C+PD T + +I + G++S+A+ +F +M ++ +P+ +L
Sbjct: 327 EAYRILAEME-NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 385
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ + + V+ N + G + +++ + Q +G++ E +E
Sbjct: 386 LDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ-----VGRVFEALE 435
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ +I AG + L + ++ +G++P++ITYN L+D +G++KR + +++
Sbjct: 1008 DIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 1067
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN TY SL+ G+A + +Y E+ KG + +V YN L+ +
Sbjct: 1068 NEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVS 1127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWT 251
G TD A+ + M C P+S T
Sbjct: 1128 GSTDSAYAAYGRMIVG-GCLPNSST 1151
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
NE + D + LI++ AG +V+ +MK KP+ +TY LLD
Sbjct: 337 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQ 396
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
V I+ M +G + N Y +++ A + + L ++ EMK+KG+ YN+L+
Sbjct: 397 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 456
Query: 221 AMCADVGYTDEAFEIFEDM--------------------KSSENCQ-------------- 246
+ +A E+F+ M KS E+ +
Sbjct: 457 SGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 516
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD ++++ + G++ A+ +F+E+ G P+ T +I+C KA + D+ V+
Sbjct: 517 PDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKI 576
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ E PD L++ + + +
Sbjct: 577 FYDMIENNCVPDVLVVNSLIDTLYKAGR 604
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 19/309 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVK 163
D ++ +IK A FD + ++ +M P+++ N+L+DT+ GR WQ+
Sbjct: 553 DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIF 612
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
KEM L P TY +LL GR ++ + + EM ++ YNT+L
Sbjct: 613 YQLKEMN---LEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCL 669
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++A ++ M +++ C PD +++++I + +EA ++F +M + P+
Sbjct: 670 CKNGAVNDALDMLYSM-TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPD 727
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP----DDRFCGCLL-NVMTQTPKEELG 338
L +++ + K + AL+ + E + P D C L+ ++ + E+
Sbjct: 728 YATLCTILPSFVKIGLMKE---ALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSI 784
Query: 339 KLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATEL---FNSISKDVKKAYCNCLIDLC 395
+ E + S L L + + EA EL F S +K N LI
Sbjct: 785 EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGL 844
Query: 396 VNLNLLENA 404
V+ NL++ A
Sbjct: 845 VDENLIDIA 853
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 19/230 (8%)
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
++ K G+ L YN+L+ D D A +F +MK C PD +T++ ++
Sbjct: 823 KKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAMGK 881
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
++ E + EM G+E ++I K++R + + L G +P
Sbjct: 882 SMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCT 941
Query: 322 CGCLLNVMTQTPKEE-----LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF 376
G LL+ + + + E +++E K+N + +LL I G+ +K LF
Sbjct: 942 YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT---IYNILLNGHRIAGNTEK-VCHLF 997
Query: 377 -----NSISKDVKKAYCNCLIDLCVNLNL---LENACKLLELGLTLEVYT 418
I+ D+ K+Y + LC L L +LLE+GL ++ T
Sbjct: 998 QDMVDQGINPDI-KSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1046
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 3/215 (1%)
Query: 106 IDPNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN + + GT AG D L + EM GV N++TY L+D + + + + +
Sbjct: 330 MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAE 389
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ M G+ N Y +L+ + + E LS+ EMK+KGM+L V+LY L+
Sbjct: 390 DVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGL 449
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++ DEA + M +P++ +++++ C K SEA A+ +M+++GF PN
Sbjct: 450 CNLQKLDEAKSLLNKMDEC-GLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPN 508
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +L+ KA D+ + N++ +LG+ P+
Sbjct: 509 IVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPN 543
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 98 RARNEKWRI-----DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
R+ WR+ PN F+ +I G+ + MKAIG P+++TYN+L+
Sbjct: 177 RSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLI 236
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
D G+ +V+ + EM G P+ TY +L+ + + E S + EMK +G+
Sbjct: 237 DGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVM 296
Query: 211 LSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+V ++T + A C + G EA ++F M+ + +P+ T++ ++ G++ +A
Sbjct: 297 ANVVTFSTFVDAFCKN-GMVREAMKLFAQMR-MKGMKPNEVTYTCLVDGTCKAGRLDDAL 354
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRALNR 309
+ NEM++ G N+ T L+ GK +DV R + R
Sbjct: 355 VLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMER 397
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+++ +D + + LI D ++ +M G+KPN + Y N++D +A++
Sbjct: 431 KDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKE 490
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + ++M D+G PN TY +L+ +A ++ +S + +M + G++ +V Y L
Sbjct: 491 SEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTAL 550
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G D+A + ++M + D+ +S++ +G + +A A+ +M+ +G
Sbjct: 551 VDGLCKNGRLDKAVLLLDEM-IDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG 609
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ +L+ T + + + L+ + E GITPD CL+N
Sbjct: 610 LQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 101/256 (39%), Gaps = 41/256 (16%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR---PWQV-- 162
P+ TL+ L G D + ++ + V PN T N++L + R + W++
Sbjct: 128 PSVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFE 187
Query: 163 --------------------------KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
+ + M G SP+ TY SL+ YG+ E+
Sbjct: 188 QLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEE 247
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ EM+ G + V YN L+ G + A+ F +MK E + TFS+ +
Sbjct: 248 VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMK-REGVMANVVTFSTFV 306
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G V EA +F +M G +PN T L+ KA R DD + N + + G+
Sbjct: 307 DAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVP 366
Query: 317 PDDRFCGCLLNVMTQT 332
LNV+T T
Sbjct: 367 ---------LNVVTYT 373
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 14/215 (6%)
Query: 69 KTGSSPKSYIWVN--------PKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGT 120
+ G P + I+ N K A L +K D+ +R + + L+
Sbjct: 467 ECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDS-----GFRPNIVTYCALVDGLCK 521
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
AG+ D ++ + +M +G++PN+ Y L+D + + R + + EM D G+S +
Sbjct: 522 AGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVV 581
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
SL+ + + +D ++ +M G+QL + Y + ++ EA E+ +M
Sbjct: 582 CTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI 641
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+ PD+ ++ +I C G + EA + NEM
Sbjct: 642 EN-GITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R+ + +D A++T I AG ++Y+ M ++GV P++ TYN ++ GR +
Sbjct: 703 RSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVSLGVAPSIQTYNTMISVYGRGR 762
Query: 158 RPWQVKTIYKEM--TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ + ++ + + G+S + TY +L+ YG+A + ++REM+E+G++
Sbjct: 763 KLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVS 822
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
YN ++ + A G EA E+F+ M + C PDS T+ ++I + K EAE M
Sbjct: 823 YNIMINVYATAGLHHEAQELFQAM-LRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSM 881
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G P+ L+ + KA T++ R + L G++PD
Sbjct: 882 QNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLSPD 924
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 2/210 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LI YG AG ++ EM+ G+KP ++YN +++ A + + +
Sbjct: 783 LDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQEL 842
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M +G SP+ TY +L+RAY ++ + M+ +G+ S +N LL+ A
Sbjct: 843 FQAMLRDGCSPDSLTYLALIRAYTQSFKFLEAEETIMSMQNEGVLPSCVHFNQLLSAFAK 902
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G+T+EA ++ + S+ PD + +M+ G V + F ++ E+ EP+ F
Sbjct: 903 AGFTEEAERVYHTLLSA-GLSPDVACYRTMLRGYLDYGCVEKGITFFEQIRES-VEPDRF 960
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+++S + Y A + + L+ + LGI
Sbjct: 961 IMSSAVHFYKLAGKELEAEGILDSMKSLGI 990
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ ++I Y G + ++YEE+ G++ +++ + ++ + + + + + +
Sbjct: 646 YISMIDAYAKCGKAEEAYHLYEEVTGKGIELGVVSISKVVHALANYGKHQEAENVIRRSF 705
Query: 171 DNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
++GL + +NT+ + + GR + S+Y M G+ S+ YNT++++
Sbjct: 706 EDGLELDTVAYNTFINAMLGAGRLHFAN---SIYDRMVSLGVAPSIQTYNTMISVYGRGR 762
Query: 228 YTDEAFEIFEDMK-SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D+A E+F + S D T++++I+ GK EA +F EM E G +P
Sbjct: 763 KLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVS 822
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+I Y A + + G +PD L+ TQ+ K
Sbjct: 823 YNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYLALIRAYTQSFK 870
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 135/321 (42%), Gaps = 61/321 (19%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P++I Y LL G+ + + + EM + G P+ ++L Y R + LS
Sbjct: 189 QPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLS 248
Query: 200 VYREMKEKGMQLSVTLYN------------------------------------------ 217
Y ++E+G+ S+ ++N
Sbjct: 249 FYSAVQERGIIPSIAVFNFMLSSLQKKSLHGKVIDFSLVKDGLVEESFKTFYEMKNLGFV 308
Query: 218 -------TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
L+++ + G DEA +++EDM+ P ++T +S++T+ G S A +
Sbjct: 309 PEEVTYSLLISLSSKTGNRDEAIKLYEDMR-YRRIVPSNYTCASLLTLYYKNGDYSRAVS 367
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+F+EM + + + LI+ YGK +D + +LG+ +++ + V
Sbjct: 368 LFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHL 427
Query: 331 QTPK-EELGKLVECVEKSN---SKLGYVVKLLLEEQDIEGDF-KKEATELFNSISKD--V 383
+ E+ ++E + N S+ Y+V LL+ ++ D EAT F ++SK
Sbjct: 428 NSGNFEKALTIMELMRSRNIWFSRFSYIV--LLQCYVMKEDLASAEAT--FQALSKTGLP 483
Query: 384 KKAYCNCLIDLCVNLNLLENA 404
CN +++L + L+LLE A
Sbjct: 484 DAGSCNDMLNLYIKLDLLEKA 504
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 107/244 (43%), Gaps = 10/244 (4%)
Query: 90 LKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L E+S+ T +N + + +S LI L GN D + +YE+M+ + P+ T
Sbjct: 291 LVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTCA 350
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
+LL + + +++ EM N + + Y L+R YG+ ED ++E ++
Sbjct: 351 SLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQL 410
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G+ + Y + + + G ++A I E M+ S N +++ ++ + ++
Sbjct: 411 GLLTNEKTYIAMAQVHLNSGNFEKALTIMELMR-SRNIWFSRFSYIVLLQCYVMKEDLAS 469
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGK---AQRTDDVVRALNRLPELGITPDDRFCGC 324
AEA F + + G P+ ++ Y K ++ D + + + P + D C
Sbjct: 470 AEATFQALSKTGL-PDAGSCNDMLNLYIKLDLLEKAKDFIFQIRKDP---VEFDMELCKT 525
Query: 325 LLNV 328
++ V
Sbjct: 526 VMKV 529
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 103/267 (38%), Gaps = 25/267 (9%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G + + EMK +G P +TY+ L+ + + +Y++M + P+ T
Sbjct: 290 GLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYTC 349
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
ASLL Y + +S++ EM++ + +Y L+ + +G ++A + F++ +
Sbjct: 350 ASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKETEQ 409
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ T+ +M + G +A + M + F L+QCY +
Sbjct: 410 L-GLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDLA 468
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEE 361
L + G+ PD C +LN+ + + LL +
Sbjct: 469 SAEATFQALSKTGL-PDAGSCNDMLNLYIK-----------------------LDLLEKA 504
Query: 362 QDIEGDFKKEATELFNSISKDVKKAYC 388
+D +K+ E + K V K YC
Sbjct: 505 KDFIFQIRKDPVEFDMELCKTVMKVYC 531
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A + F MK + QP ++ ++ + GK+ AE F EMLEAG EP+ ++
Sbjct: 174 QARDFFGWMKLQLSYQPSVIVYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTM 233
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
+ Y + R ++ + + E GI P
Sbjct: 234 LCTYARWGRHKAMLSFYSAVQERGIIP 260
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 100/235 (42%), Gaps = 14/235 (5%)
Query: 96 DTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
D R R RI P+ + ++L+ LY G++ ++++ EM+ + + + Y L+
Sbjct: 336 DMRYR----RIVPSNYTCASLLTLYYKNGDYSRAVSLFSEMEKNKIVADEVIYGLLIRIY 391
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
G+ + +KE GL N TY ++ + + + E L++ M+ + + S
Sbjct: 392 GKLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSR 451
Query: 214 TLYNTLL---AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
Y LL M D+ + F+ S+ PD+ + + M+ + + +A+
Sbjct: 452 FSYIVLLQCYVMKEDLASAEATFQAL-----SKTGLPDAGSCNDMLNLYIKLDLLEKAKD 506
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
++ + E ++ + ++++ Y K D + + + G+ D F L
Sbjct: 507 FIFQIRKDPVEFDMELCKTVMKVYCKKGMLRDAKQLIQEMGTNGLFKDSEFIQTL 561
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 3/229 (1%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
KL ++D + R+ PN +++LI + G D + EM V PN+ T+
Sbjct: 203 KLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTF 262
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+D + + + + K++ M G+ P+ TY +L+ Y + +V+ M +
Sbjct: 263 NTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ V Y+ +++ + + DEA ++FE M+ +EN PD +SS+I G+++
Sbjct: 323 MGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMR-NENVIPDVVAYSSLIDGLCKSGRIN 381
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
A +EM + G PN+ TSLI K+ + D + L ++ + GI
Sbjct: 382 SALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGI 430
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI+ G LN ++ + + G+K + ++Y L++ + + + +
Sbjct: 118 DIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLL 177
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+++ P+ Y +++ + + D +Y EM EK + +V Y +L+ V
Sbjct: 178 RKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIV 237
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+AF + +M +N P+ TF++++ GK+ EA+++ M++ G P++F
Sbjct: 238 GQLDKAFGLLNEM-VLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFT 296
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ Y + N + ++G+T D
Sbjct: 297 YNALMDGYFLVKEAGKAKNVFNIMAQMGVTCD 328
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 102/207 (49%), Gaps = 3/207 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++S +I D ++++E M+ V P+++ Y++L+D + ++ R
Sbjct: 328 DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYV 387
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
EM D G PN TY SL+ A ++ + +++ +++K++G+Q ++ YN L+ +C D
Sbjct: 388 DEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKD 447
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
TD A ++F+D+ + D T+S MI EA + ++M + G P+
Sbjct: 448 GRLTD-AQKVFQDLLMKGH-NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAI 505
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPE 312
++I + + D + L + +
Sbjct: 506 AYETIINAFFEKDMNDKAEKLLREMID 532
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RNE D A+S+LI +G + L +EM G PN+ITY +L+D + ++ +
Sbjct: 356 RNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQV 415
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K++ D G+ N TY L+ + D V++++ KG + V Y+ +
Sbjct: 416 DKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIM 475
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ DEA + M+ + C PD+ + ++I + +AE + EM++
Sbjct: 476 INGLCKESLFDEALTLLSKME-DKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIDC 533
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+++++ M+ G++ N IT N L+++ ++ +++ ++ G P+ TY +L+R
Sbjct: 69 IHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRG 128
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+++L+ + + +G++L Y TL+ +G T A + ++ E C+P
Sbjct: 129 LCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIE-GEICRP 187
Query: 248 DSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
D ++++I C+ K V +A ++ EM E PN+ TSLI + + D
Sbjct: 188 DVVMYNTIID-GLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 246
Query: 307 LNRLPELGITPD 318
LN + + P+
Sbjct: 247 LNEMVLKNVNPN 258
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R ++ ++D ++ TLI G L + +++ +P+++ YN ++D +
Sbjct: 140 NFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGL 199
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K +Y EM + + PN TY SL+ + + + EM K + +V
Sbjct: 200 CKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNV 259
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+NTL+ G EA + M E PD +T+++++ + +A+ +FN
Sbjct: 260 CTFNTLVDGLCKEGKMREAKSLVAVMM-KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFN 318
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M + G ++ + +I K + D+ + + + PD
Sbjct: 319 IMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPD 363
>gi|255661192|gb|ACU25765.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 426
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 127/249 (51%), Gaps = 16/249 (6%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAAAGRJEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
++ V LI + K ++ +VV +++ E PD +LN GKL
Sbjct: 352 VKDITVFERLIHLFSKYKKYXNVVEVFDKMRERRYFPDSNVIALVLNA--------YGKL 403
Query: 341 VECVEKSNS 349
E EK+NS
Sbjct: 404 HE-FEKANS 411
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y S++ +G+A+ + S+ EM+ G+ Y TLL M +
Sbjct: 68 SRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KRFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TL+ ++ F L+V+ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTVSYTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 173 WGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 233 LEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K S +R + + D A++++I ++G A F ++ EM+ GV P+ ++Y LL
Sbjct: 62 KAISIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLL 121
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
KR + +++ EM + + T ++ YG+ ++ ++ M++ G++
Sbjct: 122 TMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIE 181
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+V YNTLL + D EA +F M+ +N + + T++SM+ I + +A
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKANN 240
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EM G EPN +++I +GK + D +L G+ D
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEID 288
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + + +A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
IF +K S PD ++SMI + EA ++ NEM AG P+ T+L+
Sbjct: 64 ISIFSRLKRS-GFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLT 122
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ + +R + + + E+ D C +++V Q
Sbjct: 123 MHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + L+
Sbjct: 306 AHAKRLLHELKRPDNIPRDTAIHILAAAGRJEEATWVFRQAIDAGEVKDITVFERLIHLF 365
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ K+ V ++ +M + P+ N A +L AYG+ E SVY EM+++G S
Sbjct: 366 SKYKKYXNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKANSVYMEMQDEGCXFS 424
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +A+ ++++ AG L++ ++ + + + YN +L +G+ K+ + +Y
Sbjct: 401 DRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLY 460
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M +G SP+ +Y L+ ++GRA E+ + ++ E++ + + +N+L+
Sbjct: 461 EKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKN 520
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA F++M+ E PD T+S++I KV A +F+EML G PN+
Sbjct: 521 GDIDEAHMRFKEMR-EEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVT 579
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C ++ RT + V +L + G+TPD
Sbjct: 580 YNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 611
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 114/242 (47%), Gaps = 11/242 (4%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW + N ++ L++ + + N + VY E++ G K ++ YN LLD + + +
Sbjct: 217 KKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKV 276
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
QV ++K+M P+ TY ++R G+ +++L++++EM EKG ++ YNT+
Sbjct: 277 DQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTM 336
Query: 220 LAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ A+ D+ +F M N + ++ ++ S G SEA +F M
Sbjct: 337 IQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSF 396
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
E + S+++ A +T + + L+++ E I+ D VM T LG
Sbjct: 397 HDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTD--------TVMYNTVLSALG 448
Query: 339 KL 340
KL
Sbjct: 449 KL 450
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
SK+ EK T D ++T++ G ++YE+MK G P++ +YN
Sbjct: 426 SKIHEKRIST---------DTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYN 476
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
L+ + GRA R + I++E+ ++ P+ ++ SL+ G+ ++ ++EM+E+
Sbjct: 477 ILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREE 536
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G+ V Y+TL+ + A +F++M +E C P+ T++ ++ G+ +E
Sbjct: 537 GLSPDVVTYSTLIECFGKTDKVEMACRLFDEM-LAEGCSPNIVTYNILLDCLERSGRTAE 595
Query: 268 AEAMFNEMLEAGFEPN 283
A ++ ++ + G P+
Sbjct: 596 AVDLYAKLKQQGLTPD 611
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 123/256 (48%), Gaps = 8/256 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R +++D A++ L+ D V+++MK +P+ TY ++ G+ +
Sbjct: 252 RRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKA 311
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM----KEKGMQLSVTL 215
+ T+++EMT+ G +PN Y ++++A R + T+ ++ +M K M S+
Sbjct: 312 DESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSI-- 369
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
Y L+ + +G+ EA +F +M S + + D + SM+ GK +EA + +++
Sbjct: 370 YAYLVRTLSKLGHASEAHRLFCNMWSFHD-EGDRDAYMSMLESLCDAGKTTEALDLLSKI 428
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK- 334
E + + +++ GK ++T D+ ++ + G +PD L++ + +
Sbjct: 429 HEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRV 488
Query: 335 EELGKLVECVEKSNSK 350
EE K+ E +E S+ K
Sbjct: 489 EEAVKIFEELENSSCK 504
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R E D +STLI+ +G + +++EM A G PN++TYN LLD + R+ R
Sbjct: 534 REEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRT 593
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ +Y ++ GL+P+ TYA L R
Sbjct: 594 AEAVDLYAKLKQQGLTPDSITYAVLER 620
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N + D +F++LI G G+ D ++EM+ G+ P+++TY+ L++ G+ +
Sbjct: 500 NSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVE 559
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ EM G SPN TY LL R+ + + +Y ++K++G+ Y L
Sbjct: 560 MACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 618
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + LI ++G + + C ++ +K ++ N TY LL R+ + +Y E
Sbjct: 194 STINILIGIFGGGADVERCFDL---VKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVE 250
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ G + Y LL A + + V+++MK K + Y ++ M +G
Sbjct: 251 LRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGK 310
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
DE+ +F++M + + P+ +++MI + V + +F++M+
Sbjct: 311 ADESLTLFQEM-TEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMV 357
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 152/324 (46%), Gaps = 12/324 (3%)
Query: 65 YPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG 122
+P + +S + + + L EK++ + R R+ P+ F+T+I G
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR---RVSPDIYTFNTVISGLCRIG 205
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWN 179
+V +++KA G+ P++ TYN+L+D G A + V + KEM + G+SP
Sbjct: 206 QLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAV 265
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
T+ L+ Y + + V+ EMK++G+ SV YN+L++ G +E ++ E+M
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ P+ TF ++ +G +++A + M E EP++ + LI Y + +
Sbjct: 326 EDL-GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGK 384
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELGKLVECVEKSNSKLGYVVKL 357
+D + + + GI+P+ CL+ +++ + G L E EK +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 358 LLEEQDIEGDFKKEATELFNSISK 381
L+ +G+ +K A +L + +S+
Sbjct: 445 LIGALCCKGEVRK-AVKLLDEMSE 467
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P A F LI Y N + V+EEMK G+ +++TYN+L+ + + +
Sbjct: 260 ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGV 319
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM D GLSPN T+ +L+ + + D M E+ ++ V +YN L+ +
Sbjct: 320 KLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVY 379
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G ++A + E M + + P+ T++ +IT S G A + +EM E G E +
Sbjct: 380 RRLGKMEDAMAVKEAM-AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438
Query: 284 LF---VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ VL + C G+ ++ V+ L+ + E+G+ P+
Sbjct: 439 VVTYNVLIGALCCKGEVRKA---VKLLDEMSEVGLEPN 473
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 25/232 (10%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ ++ LI +Y G + + V E M G+ PN+ TYN L+ R+
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM + G+ + TY L+ A + + EM E G++ + YNT++
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Query: 224 ADVGYTDEAFEIFEDMKSSENCQ--PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
D G A+EI M E C+ + T++ I GK+ EA + NEML+
Sbjct: 485 CDKGNIKSAYEIRTRM---EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLV 541
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
PN ++ + + E G TPD R GC ++ ++ P
Sbjct: 542 PNGITYETIKE----------------GMMEKGYTPDIR--GCTVSQASENP 575
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV N++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFNKMRGLGYFPDSNVIALVLN 398
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+++ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA IF +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSIFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LS++ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF IK + AG + V+E M+ G + ++N LL + + + + ++ +
Sbjct: 263 DAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDK 322
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M SP+ +Y +L+ A+ AR + V+ EM EKGM V ++NT++
Sbjct: 323 MHGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQR 381
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
EA ++FE MK+ + P+ WT++ +I +GK+ A F EM EA +P++ T
Sbjct: 382 RPEAVKMFELMKA-KGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYT 440
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
L+ YG A++ D V L + + G PD R L+ ++T
Sbjct: 441 CLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLT 482
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L+ + A N V+ EM G+ P+++ +N +++ + R +R + ++
Sbjct: 330 DLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMF 389
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M G PN TY L+R + + + + + EM+E Q V Y LL +
Sbjct: 390 ELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNA 449
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D + E+M + + C PD+ T++++I + + R +A ++ +M++ G EP +
Sbjct: 450 KQMDRVTAVLEEM-TQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHT 508
Query: 287 LTSLIQCY 294
+++ Y
Sbjct: 509 YNMMMKSY 516
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI+ + G D + +EEM+ +P++ TY LL G AK+ +V +
Sbjct: 399 PNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAV 458
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA--MC 223
+EMT G P+ TY +L++ +D +Y++M +KG++ ++ YN ++
Sbjct: 459 LEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFV 518
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D Y ++E+M C PD +++ I G+ EA EM+ G +
Sbjct: 519 GDSNYA-MGCAVWEEMHQRGIC-PDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAP 576
Query: 284 LFVLTSLIQCYGKAQRTD 301
+ KA + D
Sbjct: 577 QIDYNKFAADFSKAGKPD 594
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
K + D ++ L+ YG A D V EEM G P+ TYN L+ + P
Sbjct: 431 KCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDA 490
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAY--GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
IYK+M GL P +TY ++++Y G + Y +V+ EM ++G+ V Y +
Sbjct: 491 ARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGC-AVWEEMHQRGICPDVNSYTVFI 549
Query: 221 AMCADVGYTDEAFEIFEDM 239
G +EA++ E+M
Sbjct: 550 NGHIRHGRPEEAYKYIEEM 568
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D ++ LIKL D +Y++M G++P + TYN ++ + + + +
Sbjct: 470 DARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAV 529
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G+ P+ N+Y + + R E+ EM KGM+ YN A +
Sbjct: 530 WEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSK 589
Query: 226 VGYTDEAFEIFEDMK 240
G D FE+ + +K
Sbjct: 590 AGKPDILFELAQKVK 604
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 38/182 (20%)
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYRE---------------------------- 203
G + TY +L G+ R E +++ +E
Sbjct: 222 GGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGALSMDAFKVAIKSFAAAGEIKNA 281
Query: 204 ------MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS-MI 256
M++ G V +N LL A G EA ++F+ M + PD ++++ M+
Sbjct: 282 VGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYS--PDLRSYTALML 339
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
C+ R V EA ++NEMLE G +P++ V ++I+ + QR + V+ + G
Sbjct: 340 AWCNARNLV-EAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPP 398
Query: 317 PD 318
P+
Sbjct: 399 PN 400
>gi|356547448|ref|XP_003542124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Glycine max]
Length = 445
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G + C +EEM GV ++ +Y+ +D + + +PW+ ++KE+ G + Y
Sbjct: 193 GWWSKCNEFWEEMDKKGVHKDLHSYSIYMDILCKGGKPWKAVKLFKEIKKKGFKLDVVVY 252
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
++RA G + + ++ V+REMKE G++ +V YNTL+ + D EA + +
Sbjct: 253 NIVIRAIGLSHGVDFSIRVFREMKELGIKPTVVTYNTLIRLLCDCYRHKEALALLRTIMP 312
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
S+ C P + ++ + K + AMF+EM+E+G P + L+ +G+
Sbjct: 313 SDGCHPTAVSYHCFF---ASMEKPKQILAMFDEMVESGVRPTMDTYVMLLNKFGRWGFLR 369
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMT 330
V N++ +LG +PD L++ +
Sbjct: 370 PVFMVWNKMKQLGCSPDAAAYNALIDALV 398
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 5/184 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + +++D ++ +I+ G + D + V+ EMK +G+KP ++TYN L+ + R
Sbjct: 241 KKKGFKLDVVVYNIVIRAIGLSHGVDFSIRVFREMKELGIKPTVVTYNTLIRLLCDCYRH 300
Query: 160 WQVKTIYKE-MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + + M +G P +Y + + + L+++ EM E G++ ++ Y
Sbjct: 301 KEALALLRTIMPSDGCHPTAVSYHCFFASMEKPK---QILAMFDEMVESGVRPTMDTYVM 357
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
LL G+ F ++ MK C PD+ ++++I + + A EML
Sbjct: 358 LLNKFGRWGFLRPVFMVWNKMKQL-GCSPDAAAYNALIDALVDKALIDMARKYDEEMLAK 416
Query: 279 GFEP 282
G P
Sbjct: 417 GLSP 420
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 3/227 (1%)
Query: 94 SYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
++D + I PN +S LI + T G ++++ +M +KP++ T+N L+D
Sbjct: 216 AFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVD 275
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + + KT++ M G+ PN TY SL+ Y + S+ M ++G+
Sbjct: 276 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNP 335
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ YN L+ + DEA +F++M ++ PD T++S+I GK+S A +
Sbjct: 336 DIQSYNILIDGFCKIKKVDEAMNLFKEM-HHKHIIPDVVTYNSLIDGLCKLGKISYALKL 394
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+EM + G P++ +S++ K + D + L +L + GI P+
Sbjct: 395 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPN 441
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 11/225 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+TLIK G L ++ + A+G + + + Y L+ + + +
Sbjct: 125 PNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDL 184
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ + N + PN Y++++ + ++ D +Y EM KG+ +V Y+ L++
Sbjct: 185 LRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 244
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG +A ++F M EN +PD +TF+ ++ GK+ E + +F M++ G +PN+
Sbjct: 245 VGQLKDAIDLFNKM-ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVV 303
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
SL+ Y + + L + + G+ PD D FC
Sbjct: 304 TYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 348
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 1/201 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E + D F+ L+ + G V+ M G+KPN++TY +L+D K +
Sbjct: 261 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK 320
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
K+I M+ G++P+ +Y L+ + + + ++ +++++EM K + V YN+L+
Sbjct: 321 AKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLID 380
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+G A ++ ++M PD T+SS++ +V +A A+ ++ + G
Sbjct: 381 GLCKLGKISYALKLVDEM-HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIR 439
Query: 282 PNLFVLTSLIQCYGKAQRTDD 302
PN++ T LI K R +D
Sbjct: 440 PNMYTYTILIDGLCKGGRLED 460
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 64 QYPHGKTGSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGT 120
Q+PH G P + + + + + + +++D + TLI
Sbjct: 115 QHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCK 174
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
G L++ + V+PN++ Y+ ++D M + K +Y EM G+SPN T
Sbjct: 175 VGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 234
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDM 239
Y++L+ + +D + ++ +M + ++ V +N L+ C D G E +F M
Sbjct: 235 YSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD-GKMKEGKTVFA-M 292
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ +P+ T+ S++ +V++A+++ M + G P++ LI + K ++
Sbjct: 293 MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKK 352
Query: 300 TDDVVRALNRLPELGITPD 318
D+ + + I PD
Sbjct: 353 VDEAMNLFKEMHHKHIIPD 371
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI + D +N+++EM + P+++TYN+L+D + + + +
Sbjct: 336 DIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLV 395
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D G+ P+ TY+S+L A + + +++ ++K++G++ ++ Y L+
Sbjct: 396 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKG 455
Query: 227 GYTDEAFEIFED-MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
G ++A IFED + N +++T MI +G EA A+ ++M
Sbjct: 456 GRLEDAHNIFEDLLVKGYNITVNTYTV--MIHGFCNKGLFDEALALLSKM 503
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSP----------------NWNTYASL 184
P I +N +L ++ ++K V ++ ++M G++P N T+ +L
Sbjct: 74 PPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTL 133
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
++ L + + G QL Y TL+ VG T A ++ + +
Sbjct: 134 IKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNL- 192
Query: 245 CQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
QP+ +S++I C+ K V++A +++EM+ G PN+ ++LI + + D
Sbjct: 193 VQPNVVMYSTIID-GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDA 251
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ N++ I PD L++ + K + GK V
Sbjct: 252 IDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTV 289
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 49/108 (45%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D + + ++K G++PNM TY L+D + + R I++++ G + NTY +
Sbjct: 424 DKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVM 483
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
+ + ++ L++ +MK+ Y ++ D D+A
Sbjct: 484 IHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA 531
>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 426
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 118/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
VG A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERVGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIALVLN 398
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 109/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y + R L+ L P D
Sbjct: 289 QVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRD 324
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF IK + AG + V+E M+ G + ++N LL + + + + ++ +
Sbjct: 263 DAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDK 322
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M SP+ +Y +L+ A+ AR + V+ EM EKGM V ++NT++
Sbjct: 323 MHGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQR 381
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
EA ++FE MK+ + P+ WT++ +I +GK+ A F EM EA +P++ T
Sbjct: 382 RPEAVKMFELMKA-KGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYT 440
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
L+ YG A++ D V L + + G PD R L+ ++T
Sbjct: 441 CLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLT 482
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L+ + A N V+ EM G+ P+++ +N +++ + R +R + ++
Sbjct: 330 DLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMF 389
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M G PN TY L+R + + + + + EM+E Q V Y LL +
Sbjct: 390 ELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNA 449
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D + E+M + + C PD+ T++++I + + R +A ++ +M++ G EP +
Sbjct: 450 KQMDRVTAVLEEM-TQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHT 508
Query: 287 LTSLIQCY 294
+++ Y
Sbjct: 509 YNMMMKSY 516
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI+ + G D + +EEM+ +P++ TY LL G AK+ +V +
Sbjct: 399 PNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAV 458
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA--MC 223
+EMT G P+ TY +L++ +D +Y++M +KG++ ++ YN ++
Sbjct: 459 LEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFV 518
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D Y ++E+M C PD +++ I G+ EA EM+ G +
Sbjct: 519 GDSNYA-MGCAVWEEMHQRGIC-PDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAP 576
Query: 284 LFVLTSLIQCYGKAQRTD 301
+ KA + D
Sbjct: 577 QIDYNKFAADFSKAGKPD 594
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
K + D ++ L+ YG A D V EEM G P+ TYN L+ + P
Sbjct: 431 KCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDA 490
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAY--GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
IYK+M GL P +TY ++++Y G + Y +V+ EM ++G+ V Y +
Sbjct: 491 ARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGC-AVWEEMHQRGICPDVNSYTVFI 549
Query: 221 AMCADVGYTDEAFEIFEDM 239
G +EA++ E+M
Sbjct: 550 NRHIRHGRPEEAYKYIEEM 568
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D ++ LIKL D +Y++M G++P + TYN ++ + + + +
Sbjct: 470 DARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAV 529
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G+ P+ N+Y + + R E+ EM KGM+ YN A +
Sbjct: 530 WEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSK 589
Query: 226 VGYTDEAFEIFEDMK 240
G D FE+ + +K
Sbjct: 590 AGKPDILFELAQKVK 604
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 38/182 (20%)
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYRE---------------------------- 203
G + TY +L G+ R E +++ +E
Sbjct: 222 GGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGALSMDAFKVAIKSFAAAGEIKNA 281
Query: 204 ------MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS-MI 256
M++ G V +N LL A G EA ++F+ M + PD ++++ M+
Sbjct: 282 VGVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYS--PDLRSYTALML 339
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
C+ R V EA ++NEMLE G +P++ V ++I+ + QR + V+ + G
Sbjct: 340 AWCNARNLV-EAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPP 398
Query: 317 PD 318
P+
Sbjct: 399 PN 400
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 122/239 (51%), Gaps = 3/239 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P +++LI+ + G + +Y+EM G +P++ N +D + +A + + I+
Sbjct: 489 NPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIF 548
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M G P+ +Y+ L+ +A +T ++++ M ++G L YN ++
Sbjct: 549 EDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKS 608
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A+E+ E+MK ++ P T+ S++ + ++ EA +F E G E N+ +
Sbjct: 609 GKVDKAYEVLEEMK-VKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVIL 667
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+SLI +GK R D+ L + + G+TP+ L++ + +T EE+ + + C +
Sbjct: 668 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKT--EEIDEALICFQ 724
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 4/247 (1%)
Query: 86 RASKLKEKSYDTRARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A + +E S +A +++ + +D A++ ++ +G D V EEMK V P +
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY +++D + + R + +++E G+ N Y+SL+ +G+ ++ + EM
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRG 263
+KG+ +V +N+L+ DEA F+ MK + C P+++T+S +I +C +
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMK-CSPNTYTYSILINGLCRVQ- 749
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
K ++A + EM + G PN+ T++I K D R G PD
Sbjct: 750 KYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFN 809
Query: 324 CLLNVMT 330
L+ M+
Sbjct: 810 ALIEGMS 816
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 2/211 (0%)
Query: 108 PN-AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
PN A + L+ + + V M+ + +P Y L+ + A++P + +
Sbjct: 140 PNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELL 199
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D G + + +L+RA R E L++ E+K ++ + LYN +
Sbjct: 200 RQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKA 259
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A++ F ++K + +PD +++SM+ + G++ EAE +F +M P +
Sbjct: 260 GSVDMAWKFFHELK-AHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYA 318
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++I YG A+R DD + L RL E G P
Sbjct: 319 YNTMIMGYGSAERFDDAYKLLERLRERGCIP 349
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ I +G AG+ D + E+KA G++P+ ++Y +++ + +A R + + ++ +M
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME 308
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
P Y +++ YG A +D + ++E+G SV +N++L D
Sbjct: 309 AERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 368
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F+ MK ++ +P+ T++ +I + G+V+EA + +EM AG PNL + +
Sbjct: 369 EALTLFDVMK--KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIM 426
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ KA + ++ R E G P+
Sbjct: 427 VDRLCKANQLEEAHRIFESASERGCNPN 454
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 111/230 (48%), Gaps = 1/230 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +T + AG + ++E+MK+ G P++ +Y+ L+ + +A + +
Sbjct: 522 RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSN 581
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I++ M+ G + + Y +++ ++ + V EMK K + +V Y +++ A
Sbjct: 582 IFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLA 641
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ DEA+ +FE+ KS + + + +SS+I G++ EA + EM++ G PN+
Sbjct: 642 KIDRLDEAYMLFEEAKS-KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 700
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ SL+ K + D+ + + E+ +P+ L+N + + K
Sbjct: 701 YTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+++ ++ +S+LI +G G D + EEM G+ PN+ T+N+L+D + + +
Sbjct: 656 AKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEE 715
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M + SPN TY+ L+ R + ++EM+++G+ +V Y T
Sbjct: 716 IDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTT 775
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+++ A VG +A+ +FE K++ PDS +F+++I S + EA +F E
Sbjct: 776 MISGLAKVGNITDAYSLFERFKTNGGI-PDSASFNALIEGMSNANRPMEAYQVFEETRLR 834
Query: 279 GFEPNLFVLTSLIQCYGKAQ 298
G N+ SL+ K +
Sbjct: 835 GCRLNVKTCISLLDALNKTE 854
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 6/276 (2%)
Query: 93 KSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
++Y R E + PN S ++ A + ++E G PN +TY +L+
Sbjct: 403 EAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLI 462
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
D +G+ + ++++M D G N Y SL+R + ED +Y+EM +G +
Sbjct: 463 DGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGR 522
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+TL NT + G ++ IFEDMKS PD ++S +I + G+ E
Sbjct: 523 PDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSF-GFLPDVRSYSILIHGLTKAGQARETSN 581
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+F M + GF + +++ K+ + D L + + P G +++ +
Sbjct: 582 IFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLA 641
Query: 331 QTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEG 366
+ + L + E++ SK G + ++L I+G
Sbjct: 642 KI--DRLDEAYMLFEEAKSK-GIELNVILYSSLIDG 674
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+D ++ K I + ++ +I + AG + + +EM+ G+ PN+++ N ++D +
Sbjct: 374 FDVMKKDAKPNI--STYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLC 431
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+A + + I++ ++ G +PN TY SL+ G+ +D ++ +M + G +
Sbjct: 432 KANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPI 491
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+Y +L+ G ++ +I+++M +PD ++ + G+V + A+F +
Sbjct: 492 IYTSLIRNFFMHGRKEDGHKIYKEM-IRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFED 550
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M GF P++ + LI KA + + + + G D R +++ + ++ K
Sbjct: 551 MKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610
Query: 335 EELGKLVECVEKSNSK 350
+ K E +E+ K
Sbjct: 611 --VDKAYEVLEEMKVK 624
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 94/205 (45%), Gaps = 1/205 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ K+R +A++ LI A + L + +M+ +G + ++ + L+ + R +
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ E+ + L P+ Y + +G+A + + E+K G++ Y ++
Sbjct: 228 EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSM 287
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G EA E+F M++ + P ++ +++MI + +A + + E G
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDV-PCAYAYNTMIMGYGSAERFDDAYKLLERLRERG 346
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVV 304
P++ S++ C GK ++ D+ +
Sbjct: 347 CIPSVVSFNSILTCLGKKRKVDEAL 371
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ + +EM+ G A+L+ R+R ED V M+ + + Y L+
Sbjct: 125 LEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIG 184
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A+ + A E+ M+ + F++++ + G++ A A+ +E+ + E
Sbjct: 185 ALAEARQPERALELLRQMQDV-GYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLE 243
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ + I C+GKA D + + L G+ PDD
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDD 281
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQV 162
PN ++TLI Y G D + + M + G++PN+I+YN +++ + G K W+
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWE- 305
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I +EM G +P+ TY +LL Y + L ++ EM G+ SV Y L+
Sbjct: 306 --ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINS 363
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ A E F+ M+ +P+ T++++I S +G ++EA + NEM E+GF P
Sbjct: 364 MCKARNLNRAMEFFDQMR-IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSP 422
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + I + +R ++ + + + E G+ PD
Sbjct: 423 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 458
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ Y GNF L ++ EM GV P+++TY L+++M +A+ + +
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M GL PN TY +L+ + R + + EM E G SV YN + +
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA + ++M + PD ++S++I+ +G++ A M EM+E G P+
Sbjct: 438 ERMEEALGVVQEM-VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 496
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+SLIQ + +R + + ++G+ PD+ L+N
Sbjct: 497 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLIN 537
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 34/243 (13%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI A N + + +++M+ G++PN TY L+D R + I EMT
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G SP+ TY + + + E+ L V +EM EKG+ V Y+T+++ G D
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476
Query: 231 EAFEIFEDM-----------------------KSSENCQ-----------PDSWTFSSMI 256
AF++ ++M + +E C PD +T++++I
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 536
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G +++A + +EM+ GF P+ + LI K RT + R L +L
Sbjct: 537 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 596
Query: 317 PDD 319
P D
Sbjct: 597 PSD 599
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 3/224 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT--IYK 167
F ++K Y D +N K+ G P +++YN++LD + R++ ++ +Y+
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM + +SPN TY L+R + + L + EM+ G +V YNTL+ +G
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEAF + + M SS+ QP+ +++ +I G + EA + EM GF P+
Sbjct: 264 RIDEAFGLLKSM-SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 322
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+L+ Y K + + G++P L+N M +
Sbjct: 323 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 366
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 15/274 (5%)
Query: 106 IDPNAFSTLIKLYGTA--GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN S + + G G+ + EEM G P+ +TYN LL+ + Q
Sbjct: 280 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 339
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I+ EM NG+SP+ TY +L+ + +AR + + +M+ +G++ + Y TL+
Sbjct: 340 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGF 399
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +EA+ I +M S P T+++ I ++ EA + EM+E G P+
Sbjct: 400 SRQGLLNEAYRILNEMTES-GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 458
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+ +++I + + D + + E G++PD L+ + E+ +L E
Sbjct: 459 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC-----EMRRLTEA 513
Query: 344 VEKSNSKLG-------YVVKLLLEEQDIEGDFKK 370
+ S L + L+ +EGD K
Sbjct: 514 CDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 547
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 53/241 (21%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I + G D + +EM GV P+ +TY++L+ + +R + +
Sbjct: 458 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 517
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG-----MQLSVTL------ 215
+EM D GL P+ TY +L+ AY L ++ EM KG + SV +
Sbjct: 518 QEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQ 577
Query: 216 ------------------------YNTLLAMCADV---------------GYTDEAFEIF 236
Y+TL+ C+++ G EA +F
Sbjct: 578 ARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF 637
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
E M N +P ++ +I CRG + +A ++ EM+ +GF P+ + +LI+
Sbjct: 638 ESM-VERNHKPGEAVYNVIIH-GHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALF 695
Query: 296 K 296
K
Sbjct: 696 K 696
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 5/218 (2%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ ++ M GV PN +TYN L++ + ++ M +G PN ++Y L+R
Sbjct: 385 IGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRG 444
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y E +S+ M + ++ YN ++ D G TD A + E MK++ CQP
Sbjct: 445 YCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKAN-GCQP 503
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D W+++ +I+ K+ A MFNEM++ G PN T+LI Y K ++ D R L
Sbjct: 504 DEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARML 563
Query: 308 NRLPELGITPDDRFCGCLLNVMTQ----TPKEELGKLV 341
R+ G P+ + L++ +T+ + EEL K++
Sbjct: 564 ERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 601
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +IK Y +G+ D + V E MKA G +P+ +Y L+ + + ++ EM
Sbjct: 473 YNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMM 532
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D GL PN TY +L+ Y + + + MK G + +V YN L+
Sbjct: 533 DRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFS 592
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ + M E PD T+S++I G + A MFN+M++ G PNL +SL
Sbjct: 593 GAEELCKVML-EEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSL 651
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
IQ G+ R ++ + L + G+ PD+
Sbjct: 652 IQALGQEGRVEEAEEMFSELKKQGLIPDE 680
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 104/205 (50%), Gaps = 6/205 (2%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
++ Y ++ G++PN++ YN++++ + + ++I ++ +G+ P+ TY S++
Sbjct: 213 MDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILG 272
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y R R + ++ M E+G + + Y+TL+ + G +EA + +M + P
Sbjct: 273 YCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM-TRHGVLP 331
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
TF++ I G++ +A +F +M + G +PN++ TSLI QR + L
Sbjct: 332 TVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS----GQRVSRMAIGL 387
Query: 308 -NRLPELGITPDDRFCGCLLNVMTQ 331
+R+ G+ P+ L+NV+ +
Sbjct: 388 FHRMSRDGVVPNTVTYNALMNVLME 412
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI Y D + E MK G +PN+ TYN L+ + + + +
Sbjct: 538 PNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 597
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K M + +SP+ TY++++ L ++ +M + G ++ Y++L+
Sbjct: 598 CKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQ 657
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA E+F ++K + PD T+ MI +C GKV A EM+ AG +P L
Sbjct: 658 EGRVEEAEEMFSELKK-QGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQ 716
Query: 286 VLTSLIQ 292
LI+
Sbjct: 717 TYDVLIK 723
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++++I GN ++ ++ G+KP+ TY +++ R +
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I+ M + G PN TY++L+ + + L EM G+ +V + +
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE-AEAMFNEMLEAGFEP 282
D+G ++A++IF DMK + C+P+ +T++S+I+ +VS A +F+ M G P
Sbjct: 344 CDMGRIEDAWKIFIDMK-KKGCKPNVYTYTSLIS----GQRVSRMAIGLFHRMSRDGVVP 398
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N +L+ + D + N + + G P+
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPN 434
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
+IK LN + G K + TY LL + + V Y ++ G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT---- 229
L PN Y S++ A + D S+ ++ + GM+ Y +++ +GY
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMI-----LGYCRNRD 278
Query: 230 -DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D AFEIF M E C+P++ T+S++I G+V+EA +EM G P + T
Sbjct: 279 LDSAFEIFNRM-DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFT 337
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ I R +D + + + G P+
Sbjct: 338 APIVALCDMGRIEDAWKIFIDMKKKGCKPN 367
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 33/245 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++I Y + D ++ M G +PN TY+ L++ + + R +
Sbjct: 262 DTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFI 321
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA----- 221
EMT +G+ P +T+ + + A ED ++ +MK+KG + +V Y +L++
Sbjct: 322 SEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS 381
Query: 222 ---------MCAD------VGY------------TDEAFEIFEDMKSSENCQPDSWTFSS 254
M D V Y D A +F +M C P++ +++
Sbjct: 382 RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVF-NMMGKHGCLPNTSSYNE 440
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I G +A +M ML+ P L +I+ Y + TD +R L + G
Sbjct: 441 LIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANG 500
Query: 315 ITPDD 319
PD+
Sbjct: 501 CQPDE 505
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + R + ++ LI NF G + + M + P+++TY+ +++ +
Sbjct: 565 RMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG 624
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
++ +M +G PN +TY+SL++A G+ E+ ++ E+K++G+ Y
Sbjct: 625 AIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYV 684
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++ +C G D AF+ +M ++ CQP T+ +I
Sbjct: 685 KMIEVCVMSGKVDRAFDFLGEMINA-GCQPTLQTYDVLI 722
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y+ LL + R+ R ++ +Y+ M PN +TY L + RA + + V++ M
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTF 252
++ +L +T Y L+ + EA +FE M S N WT
Sbjct: 835 DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTI 882
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 126/251 (50%), Gaps = 8/251 (3%)
Query: 98 RARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
R E R P+ +F+T+I + G N+ EM GV+P+++TYN+++D + +
Sbjct: 252 RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCK 311
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
A+ + + + ++M D G+ P+ TY +++ Y + + +++ ++R+M KG+ +
Sbjct: 312 ARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVT 371
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+N+ ++ G + +A EIF+ M +++ PD ++S ++ + G+ ++ +F+ M
Sbjct: 372 FNSFMSSLCKHGRSKDAEEIFQYM-TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
+ G N LI + K D+ + + G+ PD L++ +
Sbjct: 431 ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCR---- 486
Query: 336 ELGKLVECVEK 346
+G+L + +EK
Sbjct: 487 -MGRLADAMEK 496
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 6/217 (2%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK++ I+P+ ++TL+ Y +G D L ++ EM VKP +TY+ +
Sbjct: 597 EKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIV 656
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
LD + A R K ++ EM D+G + + +TY LL+ R ++ ++++ ++
Sbjct: 657 LDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC 716
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +T+ NT++ V +EA ++F + S+ P+ T+ MI G V EA+
Sbjct: 717 KFDITILNTVINALYKVRRREEANDLFAAI-STSGLVPNVSTYGVMIHNLLKEGSVEEAD 775
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
MF+ M ++G P+ +L +I+ + D+V+A
Sbjct: 776 TMFSSMEKSGCAPSSRLLNDIIRML---LQKGDIVKA 809
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S L+ Y T G F N++ M G+ N +N L+ + + ++
Sbjct: 403 DLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVF 462
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ P+ TY++L+ A+ R D + + +M G++ + +Y++L+
Sbjct: 463 TEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH 522
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E+ +M S +P+ FSS+I G+V +A +FN ++ G P +
Sbjct: 523 GDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT 582
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI Y + + L+ + +GI PD
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 614
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F+ LI + G D + V+ EM+ GV+P+++TY+ L+ R R + +
Sbjct: 440 HCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQ 499
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGE--DTLSVYREMKEKGM-QLSVTLYNTLLAMCAD 225
M GL PN Y SL+ +G +G+ + EM KG+ + ++ +++++ +
Sbjct: 500 MISIGLEPNTVVYHSLI--HGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCN 557
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A ++F + + +P TF+S+I GK+ +A + + M+ G EP++
Sbjct: 558 EGRVMDAHDVFNLVIHIGD-RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 616
Query: 286 VLTSLIQCYGKAQRTDD 302
+L+ Y K+ + DD
Sbjct: 617 TYNTLVSGYCKSGKIDD 633
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 15/285 (5%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGV-KPNMITYNNLLDTMGRAKRPWQV 162
++PN + +LI + G+ + EM + G+ +PN++ +++++ ++ R
Sbjct: 505 LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDA 564
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ + G P T+ SL+ Y E V M G++ V YNTL++
Sbjct: 565 HDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSG 624
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G D+ +F +M + +P + T+S ++ G+ S A+ MF+EM+++G
Sbjct: 625 YCKSGKIDDGLILFREMLH-KKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAV 683
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT-PKEELGKLV 341
++ L++ + TD+ + ++L + D ++N + + +EE L
Sbjct: 684 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLF 743
Query: 342 ECVEKSN-----SKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+ S S G ++ LL+E +E EA +F+S+ K
Sbjct: 744 AAISTSGLVPNVSTYGVMIHNLLKEGSVE-----EADTMFSSMEK 783
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++ M G P++++Y+ LL R + ++ M D G+ N + + L+ A+
Sbjct: 391 IFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHA 450
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ + V+ EM+ +G++ V Y+TL++ +G +A E F M S +P++
Sbjct: 451 KRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI-GLEPNT 509
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGF-EPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+ S+I G + +A+ + +EM+ G PN+ +S+I R D N
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFN 569
Query: 309 RLPELGITP 317
+ +G P
Sbjct: 570 LVIHIGDRP 578
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 51/249 (20%)
Query: 121 AGNF--DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA-------KRPWQVKTIYKEMTD 171
AG F D ++++E+ G + N L + RA P V ++ +
Sbjct: 85 AGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICR 144
Query: 172 NGLSP-----NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
P + +TY L+ RAR + + + + G++ NT L
Sbjct: 145 EEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHA 204
Query: 227 GYTDEAFEIF------------------------EDMKSSE-------------NCQPDS 249
TDEA ++ D +S E C PD
Sbjct: 205 KRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDV 264
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+F+++I +G+VS+A + NEM++ G EP++ S++ KA+ D L +
Sbjct: 265 VSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQ 324
Query: 310 LPELGITPD 318
+ + G+ PD
Sbjct: 325 MVDKGVEPD 333
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN + P S ++++ G A + ++ ++K +P YN+++ + +
Sbjct: 150 VRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQ 209
Query: 159 PWQVKTIYKEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V +Y EM+ G P+ TY++L+ A+ + + + + EMK+ GMQ + +Y
Sbjct: 210 YEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYT 269
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+A+ + A +FE+M+ + C+PD +T++ +I G++ EA F EM
Sbjct: 270 MLVALFFKLNDVHGALSLFEEMR-HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQR 328
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P+ V+ ++I GKA R DD ++ + L P
Sbjct: 329 EGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIP 368
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 4/230 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-R 158
+ E R D + +I G AG D + +++EM + P+++TYN ++ + +K R
Sbjct: 327 QREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSR 386
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+V + ++ M ++G+SP+ TY+ L+ + + E + + EM EKG Y +
Sbjct: 387 ASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCS 446
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENC-QPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ D A E+F+++K ENC S ++ MI G++ +A MF+EM +
Sbjct: 447 LIDALGKAKRYDLACELFQELK--ENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNK 504
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
G P+++ +L+ + D+ + + R+ E G PD +LN
Sbjct: 505 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 554
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
A++++I + G ++ +Y EM G P+ +TY+ L+ + R +
Sbjct: 195 QAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLN 254
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM DNG+ P Y L+ + + LS++ EM+ + + V Y L+ G
Sbjct: 255 EMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAG 314
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA+ F +M+ E C+PD+ ++MI G++ +A +F EM P++
Sbjct: 315 RIDEAYHFFYEMQ-REGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTY 373
Query: 288 TSLIQC-YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
++I+ + R +V R+ E GI+P L++ +T + E
Sbjct: 374 NTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRME 423
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + G D + + EMK G++P Y L+ + +++
Sbjct: 229 DTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLF 288
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM P+ TY L+R G+A ++ + EM+ +G + + N ++
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKA 348
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++F++M + C P T++++I + + + SE + F M E+G P+ F
Sbjct: 349 GRLDDAMKLFQEM-GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 407
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ LI + K R + + L + E G P
Sbjct: 408 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 439
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 37/244 (15%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L+ L+ + G L+++EEM+ +P++ TY L+ +G+A R + + EM
Sbjct: 268 YTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQ 327
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT 229
G P+ +++ G+A +D + +++EM SV YNT++ A+
Sbjct: 328 REGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRA 387
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP------- 282
E FE MK S P S+T+S +I ++ +A + EM E GF P
Sbjct: 388 SEVPSWFERMKES-GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCS 446
Query: 283 ---------------NLF-------------VLTSLIQCYGKAQRTDDVVRALNRLPELG 314
LF V +I+ GKA R DD + + + +LG
Sbjct: 447 LIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLG 506
Query: 315 ITPD 318
PD
Sbjct: 507 CAPD 510
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS-LLRAYGRARYGEDTLSVYRE 203
TY L+ + ++ ++ + +EM N + T S ++R G A+ ++++ +
Sbjct: 125 TYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQ 184
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+K + Q + YN+++ M G ++ E++ +M + +C PD+ T+S++I+ G
Sbjct: 185 IKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLG 244
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ A + NEM + G +P + T L+ + K +DV AL+ E+
Sbjct: 245 RRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFK---LNDVHGALSLFEEM 291
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 87 ASKLKEKSYDTRARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
A KL E S + E+ +D ++ LI + G +GC + EEM G++P++ T
Sbjct: 478 AGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYT 537
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN LL + + ++ E +GL N +TY ++ Y +A ED +++ E+
Sbjct: 538 YNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELL 597
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
K M+L+ +YN ++ G A ++ E+MKS + P+ T+SS+I G V
Sbjct: 598 SKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS-KGILPNCATYSSLIHGVCNIGLV 656
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+A+ + +EM + GF PN+ T+LI Y K + D
Sbjct: 657 EDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD 692
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---G 154
R +E D +F+ +I G + + ++ +M+ +G+ PN++TYN +++ + G
Sbjct: 210 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 269
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R +++K ++MT G+ PN TY +L+ + + + + EM G +V
Sbjct: 270 RLDNAFELK---EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVV 326
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
++N L+ +G + A +I +D+ S+N P S T S++ ++ AE E
Sbjct: 327 VFNNLIDGYCKMGNIEGALKI-KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEE 385
Query: 275 MLEAGF 280
+L +G
Sbjct: 386 ILSSGL 391
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+T N L+ + A + + I KEM + GL + TY +L+ + E + E
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M ++G+Q + YN LL +VG D+A +++++ K+S + T+ M+
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS-GLISNIHTYGIMMEGYCKAN 584
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + E +FNE+L E N V +I+ + + ++ L + GI P+
Sbjct: 585 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 639
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
S+L+K A F+ C V+ M G P++ ++ N+++ + + + ++ +M
Sbjct: 193 LSSLVK----ANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKME 247
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+SPN TY ++ + ++ + +M KG+Q ++ Y L+ + + D
Sbjct: 248 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 307
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ I ++M + P+ F+++I G + A + + M+ P L SL
Sbjct: 308 KVNHILDEMIGA-GFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL 366
Query: 291 IQCYGKAQRTDDVVRALNRL--PELGITPDD 319
+Q + K+ + + AL + L I PD+
Sbjct: 367 MQGFCKSDQIEHAENALEEILSSGLSIHPDN 397
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 36/218 (16%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K ++ ++ +IK + GN L + E MK+ G+ PN TY++L+ +
Sbjct: 599 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 658
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
K + EM G PN Y +L+ Y + + S + EM
Sbjct: 659 AKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM----------------- 701
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
S N P+ +T++ MI G + +A + +M E+G
Sbjct: 702 -------------------ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIV 742
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ L + KA D+ + +++ G+ D+
Sbjct: 743 PDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDE 780
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ V+ + KG S+ N L+ ++ E+F M SE PD ++F+++I
Sbjct: 171 VDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM--SEGACPDVFSFTNVIN 228
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
GK+ A +F +M + G PN+ +I + R D+ ++ G+ P
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288
Query: 318 DDRFCGCLLN 327
+ + G L+N
Sbjct: 289 NLKTYGALIN 298
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 102/259 (39%), Gaps = 42/259 (16%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN F+ LI Y GN +G L + + M + + P +T +L+ ++ + +
Sbjct: 322 NPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAEN 381
Query: 165 IYKEMTDNGLS--PNWNTYASL------LRAYGRARYGEDTLS----------------- 199
+E+ +GLS P+ N Y+ + R + R+ + LS
Sbjct: 382 ALEEILSSGLSIHPD-NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 440
Query: 200 -----------VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP- 247
++ + EKG S N L+ G EA I ++M E P
Sbjct: 441 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEML--ERGLPM 498
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T++++I GKV + EM + G +P+++ L++ + DD ++
Sbjct: 499 DRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLW 558
Query: 308 NRLPELGITPDDRFCGCLL 326
+ G+ + G ++
Sbjct: 559 DEFKASGLISNIHTYGIMM 577
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 104 WRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+ I PN F+ +I Y GN + N+ +MK G+ P+++TYN L + +A
Sbjct: 704 FNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDN 763
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAY 188
+ +M GL + TY +L+ +
Sbjct: 764 AFKVCDQMATEGLPVDEITYTTLVHGW 790
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 5/215 (2%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DPN ++ LI + A + + + EEM+ G PN++TYN L+D + + +
Sbjct: 176 DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQD 235
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC 223
+ K+M + G +PN T+ SL+ + + +D + M KGM+ +V Y+ L+ +C
Sbjct: 236 VVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 295
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ EA E+ E+MK + PD++T+S++I K+ EAE M M +G P+
Sbjct: 296 KSQKFL-EAKEVLEEMK-TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ V +S+I + K+ + + + L + + +PD
Sbjct: 354 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 388
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ +I + AG+ L + EEMK+ G P+ T+ ++ M A +
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANA---GDLDGAM 167
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G PN TY +L+ A+ RA+ E+ + + EM+E+G ++ YN L+ +
Sbjct: 168 DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL 227
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
A ++ + M P+ TF+S++ RG V +A + M+ G PN+
Sbjct: 228 SMVGAAQDVVKKMIEG-GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++LI K+Q+ + L + G+TPD
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPD 318
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 115/228 (50%), Gaps = 12/228 (5%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F++L+ + GN D + M A G++PN++TY+ L+D + ++++ + K +
Sbjct: 247 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 306
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM G++P+ TY++L+ +A E+ + R M G V +Y++++
Sbjct: 307 LEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
G EA + ++M+ PD T++++I GK++EA+ + +M E+G P++
Sbjct: 367 SGKLLEAQKTLQEMRKQRK-SPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV 425
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCGC 324
+++I K+ + + L+R+ + G PD D C C
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 473
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 6/213 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+AF+ +I AG+ DG ++ ++++G PN++TY L+ RAK+ + +
Sbjct: 145 PDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKL 201
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM + G PN TY L+ A + V ++M E G +V +N+L+
Sbjct: 202 LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 261
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++ M ++ +P+ T+S++I K EA+ + EM G P+ F
Sbjct: 262 RGNVDDARKLLGIM-VAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF 320
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++LI KA + ++ + L R+ G TPD
Sbjct: 321 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 39/249 (15%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +S LI + F V EEMK GV P+ TY+ L+ + +A + + + +
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM 341
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +G +P+ Y+S++ A+ ++ + +EM+++ V YNT++
Sbjct: 342 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT---------------------------- 257
+G EA I E M+ S + PD T+S++I
Sbjct: 402 LGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 461
Query: 258 --------ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+C C G++ EAE + M AG PN+ T+LI KA++ D+ R +
Sbjct: 462 TYTTIIDGLCKC-GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 520
Query: 310 LPELGITPD 318
+ G P+
Sbjct: 521 MRNAGCPPN 529
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S++I + +G +EM+ P+++TYN ++D + + + + + I
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 412
Query: 167 KEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M ++G + P+ TY++++ ++ + + M + G V Y T++
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 472
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA + + MK + C P+ T++++I+ +C R KV EAE + EM AG PNL
Sbjct: 473 CGRLEEAEYLLQGMKRA-GCAPNVVTYTTLISGLCKAR-KVDEAERVMEEMRNAGCPPNL 530
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+++ + R + + + R+ +
Sbjct: 531 VTYNTMVNGLCVSGRIKEAQQLVQRMKD 558
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ + M G P+++TY ++D + + R + + + + M G +PN TY +L+
Sbjct: 447 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 506
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE-NCQPD 248
+AR ++ V EM+ G ++ YNT++ G EA ++ + MK C PD
Sbjct: 507 KARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPD 566
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEM 275
+ T+ +++ V EAE + +M
Sbjct: 567 AATYRTIVNALMSSDLVQEAEQLLEQM 593
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P++ +YN ++ A + +EM G +P+ T+ ++ A A + +
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD 168
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
R M G +V Y L+A A +EA ++ E+M+ C P+ T++ ++
Sbjct: 169 HLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMR-ERGCPPNLVTYNVLVDAL 224
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V A+ + +M+E GF PN+ SL+ + K DD + L + G+ P+
Sbjct: 225 CKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 283
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G S ++ SLL+ R + + ++R + V YN +++ + G A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
E+ E+MKS+ PD++T + +IT + G + A + + G +PN+ T+LI
Sbjct: 132 LELLEEMKSA-GFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIA 187
Query: 293 CYGKAQRTDDVVRALNRLPELGITPD 318
+ +A++ ++ ++ L + E G P+
Sbjct: 188 AFARAKKLEEAMKLLEEMRERGCPPN 213
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I G + + + MK G PN++TY L+ + +A++ + + +
Sbjct: 459 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 518
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS--VTLYNTLLAMCA 224
+EM + G PN TY +++ + ++ + + MK+ + S Y T++
Sbjct: 519 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 578
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
EA ++ E MKS+ + Q + + +
Sbjct: 579 SSDLVQEAEQLLEQMKSTTSSQQEQGSLT 607
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+N+LL + EA ++F + +C+PD +++ +I+ G + A + EM
Sbjct: 80 WNSLLQVLVRCKKHREAGDLFRS-ELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK- 334
AGF P+ F T +I A D A++ L +G P+ L+ + K
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDG---AMDHLRSMGCDPNVVTYTALIAAFARAKKL 195
Query: 335 EELGKLVE 342
EE KL+E
Sbjct: 196 EEAMKLLE 203
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 36/263 (13%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +K R+ P+ F +I+ + AG+ L+ + M+ G P ++TYN L+ + R
Sbjct: 523 RMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKH 582
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + ++ +M+ G++PN +TY ++R Y + + ++KE G++L V +Y
Sbjct: 583 QVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYE 642
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSE--------NCQPDSW------------------- 250
TLL C G A + +M + N D W
Sbjct: 643 TLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKED 702
Query: 251 -------TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
TF+S I C G + AE + EM + G +PN+ T+LI+ + K D
Sbjct: 703 GIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRA 762
Query: 304 VRALNRLPELGITPDDRFCGCLL 326
++ + G+ PD+ CL+
Sbjct: 763 LKCFEEMKSAGLKPDEAAYHCLV 785
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + +++ Y A + CL V+E +K G +P++I+Y L++ + + + + KE
Sbjct: 394 DVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKE 453
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M +G+ N TY+ L+ + + S++ +M + G+Q +YN L+ +G
Sbjct: 454 MESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGN 513
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A IFE MK E QP + TF +I + G + A + M +G P +
Sbjct: 514 MDRAIRIFERMK-KERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYN 572
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + + + V L+++ GI P++
Sbjct: 573 ALIHGLIRKHQVERAVSVLDKMSIAGIAPNE 603
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y T+ + ++D + TL++ +G L V EM + N YN L+D
Sbjct: 625 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWA 684
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R W+ + K+M ++G+ PN +T+ S + A +A + +V +EM + G++ +V
Sbjct: 685 RRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVK 744
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ TL+ A V D A + FE+MKS+ +PD + ++T R V E
Sbjct: 745 TFTTLIKGWAKVSLPDRALKCFEEMKSA-GLKPDEAAYHCLVTSLLSRATVMEG 797
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 9/255 (3%)
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ M G+ PN + SL+ AY AR LS EMK +G++++V Y+ L+
Sbjct: 271 HARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILI 330
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
A + A ++F++ K+ + + +S++I G + AE + EM E G
Sbjct: 331 AGYGKTNDAESADKLFKEAKTKLD-NLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGI 389
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV---MTQTPKE-E 336
+ + V S++ Y AQ + RL E G P GCL+N+ + + PK
Sbjct: 390 DAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALA 449
Query: 337 LGKLVEC--VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
+ K +E ++ +N ++ + D F + + + D +A N L++
Sbjct: 450 VSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPD--RAIYNLLVEA 507
Query: 395 CVNLNLLENACKLLE 409
+ ++ A ++ E
Sbjct: 508 FCKMGNMDRAIRIFE 522
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 89/217 (41%), Gaps = 1/217 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F ++ Y G+ +E M+A G++PN + +L+ A+ + +EM
Sbjct: 256 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 315
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL TY+ L+ YG+ E +++E K K L+ +Y+ ++ G D
Sbjct: 316 SEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMD 375
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ +M+ P + SM+ + + +F + E GF P++ L
Sbjct: 376 RAEELVREMEEDGIDAPID-VYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCL 434
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
I Y K + + + GI +++ L+N
Sbjct: 435 INLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLIN 471
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%)
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+P F M+ + RG A A F M G EPN FV TSL+ Y A+
Sbjct: 250 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 302
>gi|410110073|gb|AFV61116.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
virgata]
Length = 424
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ + N++TYN+++ G+
Sbjct: 184 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHE 243
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T+
Sbjct: 244 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMX 303
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++KS +N D + I I + G++ EA +F + ++AG
Sbjct: 304 VAYERAGLVAHAKRLLHELKSPDNIPRD-----TAIHILAGAGRIEEATYVFRQAIDAGE 358
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +V+ +++ LG PD +LN
Sbjct: 359 VKDITVFERMIHLFSKYKKYANVIEVFDKMRGLGYFPDSNVIALVLN 405
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 111/230 (48%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 15 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 74
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 75 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN 134
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 135 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 193
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+L++ YG A+ + + + I + ++ + +T + E
Sbjct: 194 YNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHE 243
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 117 VMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 176
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K + +V YN+++ +
Sbjct: 177 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIY 236
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 237 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 295
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++ Y +A R L+ L P D
Sbjct: 296 QVLYQTMXVAYERAGLVAHAKRLLHELKSPDNIPRD 331
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 50 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 109
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 110 SEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 169
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + T
Sbjct: 170 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIVQNVVT 228
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 229 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 288
Query: 312 ELGITPD 318
G+ D
Sbjct: 289 SSGVEID 295
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 63 KLCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNT 121
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 122 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 168
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 128/249 (51%), Gaps = 16/249 (6%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM D G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + +++K +PD+ + I I + G++ EA +F + +EAG
Sbjct: 297 VAYERAGLVAHAKRLLQELK-----RPDNIPRDTAIHILAGAGRIEEATWVFRQAVEAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
++ V +I + K ++ +VV +++ LG P +LN GKL
Sbjct: 352 VKDITVFERMINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNA--------YGKL 403
Query: 341 VECVEKSNS 349
E +K+NS
Sbjct: 404 HE-FDKANS 411
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G++P+ Y S++ +G+A+ + ++ EM+ G+ Y TLL M +
Sbjct: 68 SRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 QKFLEALSLFSEMREIQ-CSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ TL+ +Y F L+++ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTVSYCTLLTMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 173 WSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M+ +P++ T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 233 LEHEKANNLIQEMQ-DRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLQELKRPDNIPRD 324
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+ P+++ YN++++ G+AK + + +
Sbjct: 43 DLVLYSNLIELSRKLCDYSRAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALV 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ P+ +Y +LL Y + + LS++ EM+E
Sbjct: 103 SEMRTAGVMPDTVSYCTLLTMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM + G EPN +++I +GK + D +L
Sbjct: 222 YNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
GI D
Sbjct: 282 CSGIEID 288
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ +D LS ++M+E + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A IF +K S PD ++SMI + EA A+ +EM AG P+ +L
Sbjct: 62 RAISIFSRLKRS-GIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + Q+ + + + + E+ + D C +++V Q
Sbjct: 121 LTMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQ 161
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R E R D T I + AG + V+ + G ++ + +++
Sbjct: 306 AHAKRLLQELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAVEAGEVKDITVFERMINLF 365
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ K+ V ++ +M G P+ N A +L AYG+ + SVY EM+++G S
Sbjct: 366 SKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGKLHEFDKANSVYMEMQDEGCAFS 424
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 152/324 (46%), Gaps = 12/324 (3%)
Query: 65 YPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAG 122
+P + +S + + + L EK++ + R R+ P+ F+T+I G
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRR---RVSPDIYTFNTVISGLCRIG 205
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWN 179
+V +++KA G+ P++ TYN+L+D G A + V + KEM + G+SP
Sbjct: 206 QLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAV 265
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
T+ L+ Y + + V+ EMK++G+ SV YN+L++ G +E ++ E+M
Sbjct: 266 TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEM 325
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ P+ TF ++ +G +++A + M E EP++ + LI Y + +
Sbjct: 326 EDL-GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGK 384
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELGKLVECVEKSNSKLGYVVKL 357
+D + + + GI+P+ CL+ +++ + G L E EK +
Sbjct: 385 MEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 358 LLEEQDIEGDFKKEATELFNSISK 381
L+ +G+ +K A +L + +S+
Sbjct: 445 LIGALCCKGEVRK-AVKLLDEMSE 467
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P A F LI Y N + V+EEMK G+ +++TYN+L+ + + +
Sbjct: 260 ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGV 319
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM D GLSPN T+ +L+ + + D M E+ ++ V +YN L+ +
Sbjct: 320 KLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVY 379
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G ++A + E M + + P+ T++ +IT S G A + +EM E G E +
Sbjct: 380 RRLGKMEDAMAVKEAM-AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438
Query: 284 LF---VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ VL + C G+ ++ V+ L+ + E+G+ P+
Sbjct: 439 VVTYNVLIGALCCKGEVRKA---VKLLDEMSEVGLEPN 473
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 23/221 (10%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ ++ LI +Y G + + V E M G+ PN+ TYN L+ R+
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM + G+ + TY L+ A + + EM E G++ + YNT++
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484
Query: 224 ADVGYTDEAFEIFEDMKSSENCQ--PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
D G A+EI M E C+ + T++ I GK+ EA + NEML+
Sbjct: 485 CDKGNIKSAYEIRTRM---EKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLV 541
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
PN ++ + + E G TPD R C
Sbjct: 542 PNGITYETIKE----------------GMMEKGYTPDIRGC 566
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 87 ASKLKEKSYDTRARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
A KL E S + E+ +D ++ LI + G +GC + EEM G++P++ T
Sbjct: 501 AGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYT 560
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN LL + + ++ E +GL N +TY ++ Y +A ED +++ E+
Sbjct: 561 YNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELL 620
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
K M+L+ +YN ++ G A ++ E+MKS + P+ T+SS+I G V
Sbjct: 621 SKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS-KGILPNCATYSSLIHGVCNIGLV 679
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A+ + +EM + GF PN+ T+LI Y K + D + I P+
Sbjct: 680 EDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPN 732
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---G 154
R +E D +F+ +I G + + ++ +M+ +G+ PN++TYN +++ + G
Sbjct: 233 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 292
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R +++K ++MT G+ PN TY +L+ + + + V EM G +V
Sbjct: 293 RLDNAFELK---EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVV 349
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
++N L+ +G + A +I +D+ S+N P S T S++ ++ AE E
Sbjct: 350 VFNNLIDGYCKMGNIEGALKI-KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEE 408
Query: 275 MLEAGF 280
+L +G
Sbjct: 409 ILSSGL 414
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+T N L+ + A + + I KEM + GL + TY +L+ + E + E
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M ++G+Q + YN LL +VG D+A +++++ K+S + T+ M+
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKAS-GLISNIHTYGIMMEGYCKAN 607
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + E +FNE+L E N V +I+ + + ++ L + GI P+
Sbjct: 608 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 662
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 95/211 (45%), Gaps = 8/211 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
S+L+K A F+ C V+ M G P++ ++ N+++ + + + ++ +M
Sbjct: 216 LSSLVK----ANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKME 270
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+SPN TY ++ + ++ + +M KG+Q ++ Y L+ + + D
Sbjct: 271 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 330
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ + ++M S P+ F+++I G + A + + M+ P L SL
Sbjct: 331 KVNHVLDEMIGS-GFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL 389
Query: 291 IQCYGKAQRTDDVVRALNRL--PELGITPDD 319
+Q + K+ + + AL + L I PD+
Sbjct: 390 MQGFCKSDQIEHAENALEEILSSGLSIHPDN 420
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 36/218 (16%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K ++ ++ +IK + GN L + E MK+ G+ PN TY++L+ +
Sbjct: 622 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 681
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
K + EM G PN Y +L+ Y + + S + EM
Sbjct: 682 AKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM----------------- 724
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
S N P+ +T++ MI G + +A + +M E+G
Sbjct: 725 -------------------ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIV 765
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ L + KA D+ + +++ G+ D+
Sbjct: 766 PDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDE 803
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ V+ + KG S+ N LL+ ++ E+F M SE PD ++F+++I
Sbjct: 194 VDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM--SEGACPDVFSFTNVIN 251
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
GK+ A +F +M + G PN+ +I + R D+ ++ G+ P
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311
Query: 318 DDRFCGCLLN 327
+ + G L+N
Sbjct: 312 NLKTYGALIN 321
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 2/154 (1%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ + G P+ T LL + +A E V+R M E + N + A+C
Sbjct: 196 VFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACPDVFSFTNVINALCK 255
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + A E+F M+ P+ T++ +I G++ A + +M G +PNL
Sbjct: 256 G-GKMENAIELFMKMEKL-GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNL 313
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI K D V L+ + G P+
Sbjct: 314 KTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPN 347
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 102/259 (39%), Gaps = 42/259 (16%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN F+ LI Y GN +G L + + M + + P +T +L+ ++ + +
Sbjct: 345 NPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAEN 404
Query: 165 IYKEMTDNGLS--PNWNTYASL------LRAYGRARYGEDTLS----------------- 199
+E+ +GLS P+ N Y+ + R + R+ + LS
Sbjct: 405 ALEEILSSGLSIHPD-NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 463
Query: 200 -----------VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP- 247
++ + EKG S N L+ G EA I ++M E P
Sbjct: 464 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEM--LERGLPM 521
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T++++I GKV + EM + G +P+++ L++ + DD ++
Sbjct: 522 DRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLW 581
Query: 308 NRLPELGITPDDRFCGCLL 326
+ G+ + G ++
Sbjct: 582 DEFKASGLISNIHTYGIMM 600
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 104 WRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+ I PN F+ +I Y GN + N+ +MK G+ P+++TYN L + +A
Sbjct: 727 FNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDN 786
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAY 188
+ +M GL + TY +L+ +
Sbjct: 787 AFKVCDQMATEGLPVDEITYTTLVHGW 813
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 113/214 (52%), Gaps = 1/214 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++P F+TLI Y +G D L + M+ G++ ++ YN++ + + R + K +
Sbjct: 398 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 457
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + G+SPN ++ +L+ Y + + V+REM+EKG ++ YN L+ +
Sbjct: 458 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 517
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++ ++++ + PD +T +S+I GKV A +F+EM + G PN+
Sbjct: 518 RGNMKEAHKLKDELE-NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 576
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
T++I K R+++ + + + E G+TPDD
Sbjct: 577 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDD 610
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI + G + ++EEM+ G++ ++ Y +++ R+ + ++ EMT
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D GL P+ +TY +L+ +A E + EM+ KG+ L+ ++NTL+ + G D
Sbjct: 358 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 417
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA + + + + + D + ++S+ + +C K EA+ + M+E G PN T+
Sbjct: 418 EALRL-QVVMEKKGLESDVFAYNSIASGLCKLNRK-DEAKGLLFSMVERGVSPNTMSFTT 475
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI Y K + R + E G P+
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPN 504
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + D ++++I +GN L +++EM G+ P+ TY L+ + +A +
Sbjct: 322 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 381
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM G+ N + +L+ Y + ++ L + M++KG++ V YN++
Sbjct: 382 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 441
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + DEA + M P++ +F+++I I G EA+ +F EM E G
Sbjct: 442 ASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 500
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
PN+ LI Y K + + + L G+ PD C L++
Sbjct: 501 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIH 548
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 37/153 (24%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPW 160
+ PN +F+TLI +Y GNF V+ EM+ G PN+ITYN L+D G K
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 525
Query: 161 QVK--------------------------------TIYKEMTDNGLSPNWNTYASLLRAY 188
++K ++ EM GL PN TY +++
Sbjct: 526 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 585
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ E+ +Y EMKE G+ T+Y++L+
Sbjct: 586 SKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 618
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ I+ Y + G + M+ GV N++TY L+ + + + +++EM
Sbjct: 263 YNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMR 322
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ + Y S++ R+ + L ++ EM +KG+ S Y L+ G +
Sbjct: 323 EKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQME 382
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A + +M+ + + F+++I G V EA + M + G E ++F S+
Sbjct: 383 AAQMLVNEMQ-GKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 441
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
K R D+ L + E G++P+
Sbjct: 442 ASGLCKLNRKDEAKGLLFSMVERGVSPN 469
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 117/271 (43%), Gaps = 25/271 (9%)
Query: 82 PKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
P + AS + + +++ K++ F L ++Y F L +E M+ G
Sbjct: 131 PVTVIASLVDDACNESKCNRAKFK--EKFFDLLFRVYADNKMFGEALEAFEHMEKKGFH- 187
Query: 142 NMITYNNLLDTMGRAKRPWQVKT---IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
I + L + +R QV + ++ M + L Y+ + G + G+ +
Sbjct: 188 --IDERSCLVYLLALRRGGQVDSCLRFFRRMVN--LDVEVTVYSLTIVLDGLCKRGDVEM 243
Query: 199 S--VYREMKEKGMQLSVTLYNTLLAMC---ADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ E+ KG++ +V YN + D+G E + E E + T++
Sbjct: 244 GRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLME----KEGVACNVVTYT 299
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I S GK+ EA+ +F EM E G E +++V TS+I C R+ +V RAL E+
Sbjct: 300 LLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISC---NCRSGNVKRALVLFDEM 356
Query: 314 ---GITPDDRFCGCLLNVMTQTPKEELGKLV 341
G+ P G L++ + + + E +++
Sbjct: 357 TDKGLIPSAHTYGALIHGVCKAGQMEAAQML 387
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 141/312 (45%), Gaps = 36/312 (11%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+F+TLI Y +GN D + M V P++ TY+ L++ + + + ++ EM
Sbjct: 262 SFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM 321
Query: 170 TDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
D GL PN T+ +L+ + GRA G + +Y++M KG++ V YNTL+ V
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLG---MEIYQQMLRKGVKPDVITYNTLINGLCKV 378
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++ +M + +PD +T++ +I C G + A + EM++ G E +
Sbjct: 379 GDLREAKKLVIEM-TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
T+LI + + + + R L + E GI PDD +++ + K
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK--------------K 483
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEAT--ELFNSISKDVKKAYCNCLIDLCVNLN----- 399
+ K G+ LL+E +G T L N + K + N L+D +NL
Sbjct: 484 GDVKTGFK---LLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDD 540
Query: 400 -----LLENACK 406
LLE CK
Sbjct: 541 ITYNILLEGHCK 552
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 105 RIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R+ P+ F S LI G D ++ EM G+ PN +T+ L++ R
Sbjct: 290 RVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLG 349
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
IY++M G+ P+ TY +L+ + + + EM ++G++ Y L+
Sbjct: 350 MEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C G + A EI ++M E + D+ F+++I+ G+V EAE EMLEAG +P
Sbjct: 410 CCKEGDLESALEIRKEM-VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKP 468
Query: 283 NLFVLTSLIQCYGK 296
+ T +I + K
Sbjct: 469 DDATYTMVIHGFCK 482
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 1/196 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI G+ + EM G+KP+ TY L+D + I
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM G+ + + +L+ + R + REM E G++ Y ++
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKK 483
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G F++ ++M+ + P T++ ++ +G++ A + + ML G P+
Sbjct: 484 GDVKTGFKLLKEMQCDGHV-PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDIT 542
Query: 287 LTSLIQCYGKAQRTDD 302
L++ + K +D
Sbjct: 543 YNILLEGHCKHGNRED 558
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 107/272 (39%), Gaps = 16/272 (5%)
Query: 56 PTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPNAFS- 112
PT H +P ++ I V+P P S LK S + ++P++ S
Sbjct: 30 PTSHCHDPIL------TTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSP 83
Query: 113 ----TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT-YNNLLDTMGRAKRPWQVKTIYK 167
+ K T +F ++ Y M M++ +LL + K +++
Sbjct: 84 PSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFT 143
Query: 168 EMTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + G + ++ L+ AY + Y D + +R +++ +Q+ L +
Sbjct: 144 SVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKL 203
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
T A+ +E++ PD F+ ++ K++EA+ +F E+ + G P +
Sbjct: 204 NLTSPAWAFYEEILDC-GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVS 262
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI Y K+ D R + E + PD
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPD 294
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 106 IDPNAFSTLIKLYGTA--GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ F+ + + G G+ + L + +EM G++ + + + L+ R + + +
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+EM + G+ P+ TY ++ + + + + +EM+ G V YN LL
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G A + + M + PD T++ ++
Sbjct: 516 CKQGQMKNANMLLDAMLNL-GVVPDDITYNILL 547
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 4/235 (1%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+ASK++E + R K P+ F+T ++ Y G + L++ ++MK+ G+KP++
Sbjct: 509 KASKMEE-AIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDI 567
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TY ++D +AK + E+ NGL PN Y +L+ YGR D + V
Sbjct: 568 VTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDT 627
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
MK G+Q + YN+L+ G +EA EIF +N + ++ +I G
Sbjct: 628 MKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQC-ILKNIELGVIGYTIIIQGFCKIG 686
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
K+ EA F EM PN T+L+ Y K ++ + + + GI PD
Sbjct: 687 KIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPD 741
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 139/307 (45%), Gaps = 8/307 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +IK AG D + E++ G++P ++TYN L+D + R+ R + +
Sbjct: 215 DVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLK 274
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRA-RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + L P+ T+ L+ R R+GE +V +EM+ G+ + +YN L+
Sbjct: 275 GRMVEGRLRPSIVTFGILINGLARGQRFGEVD-AVLQEMEGFGITPNEVIYNQLIGWHCR 333
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G+ EA +F++M S+ + T++ + G++ AE + +EML AG +
Sbjct: 334 EGHCSEALRLFDEM-VSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCS 392
Query: 286 VLTSLIQCYGKAQ-RTDDVVRALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGKLVEC 343
+ S++ + + R D V+R + + + P+D C+ + + EE ++
Sbjct: 393 LFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFL 452
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI---SKDVKKAYCNCLIDLCVNLNL 400
V + L +G+ KEAT++ ++ + + N +I C +
Sbjct: 453 VLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASK 512
Query: 401 LENACKL 407
+E A +L
Sbjct: 513 MEEAIQL 519
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 3/208 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++E + D + T+I Y A + E+ G++PN + YN L+ GR
Sbjct: 559 KSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSI 618
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ M NG+ P TY SL+ A E+ ++ + K ++L V Y +
Sbjct: 619 SDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTII 678
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS-MITICSCRGKVSEAEAMFNEMLEA 278
+ +G DEA F++M + +P+ T+++ M C C G EA +F+EM+ +
Sbjct: 679 IQGFCKIGKIDEAVMYFKEMH-YRDIRPNKMTYTTLMYAYCKC-GNKEEAFKLFDEMVSS 736
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
G P+ +LI + D +V +
Sbjct: 737 GIVPDTVSYNTLISGCCEVDSLDKIVES 764
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD-NGLSPNWNT 180
G+ + + E+ G P++ T N L++ +G + + ++ EM D N ++P+ T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y +++A RA + + E++ G+Q +V YN L+ G +EAF++ M
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+P TF +I + + E +A+ EM G PN + LI + +
Sbjct: 279 EGR-LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHC 337
Query: 301 DDVVRALNRLPELGI 315
+ +R + + GI
Sbjct: 338 SEALRLFDEMVSKGI 352
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + I PN ++ LI + G+ L +++EM + G+K ++TYN + + +
Sbjct: 313 EGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEM 372
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASL----LRAYGR------------ARY---------- 193
+ I EM G++ + + + S+ LR GR AR+
Sbjct: 373 EHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTA 432
Query: 194 ----------GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
E+ ++ + KG+ +++ N L+ EA ++ + M S
Sbjct: 433 CIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDS- 491
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+ D T++ MI C K+ EA + ++M++ GF+P+LF + ++ Y + +D+
Sbjct: 492 GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDI 551
Query: 304 VRALNRLPELGITPD 318
+ L+++ G+ PD
Sbjct: 552 LHLLDQMKSEGLKPD 566
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 37/171 (21%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++ LI YG G+ + V + MK G++P ITYN+L+ M A + K I
Sbjct: 600 PNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEI 659
Query: 166 Y-----------------------------------KEMTDNGLSPNWNTYASLLRAYGR 190
+ KEM + PN TY +L+ AY +
Sbjct: 660 FAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCK 719
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
E+ ++ EM G+ YNTL++ C +V D+ E +M S
Sbjct: 720 CGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 52/275 (18%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V + M GV+ + ITYN ++ +A + + + +M G P+ T+ + LRAY
Sbjct: 484 VLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYC 543
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
ED L + +MK +G++ + Y T++ GY
Sbjct: 544 NLGKVEDILHLLDQMKSEGLKPDIVTYGTIID-----GY--------------------- 577
Query: 250 WTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
C+ K V +A E+++ G PN + +LI YG+ D + L+
Sbjct: 578 -----------CKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLD 626
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEELGK--LVECVEKSNSKLGYVVKLLLEEQDIEG 366
+ GI P L+ M E K +C+ K N +LG + ++ + +
Sbjct: 627 TMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILK-NIELGVIGYTIIIQGFCKI 685
Query: 367 DFKKEATELFNSIS-KDVKK----------AYCNC 390
EA F + +D++ AYC C
Sbjct: 686 GKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKC 720
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 113/214 (52%), Gaps = 1/214 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++P F+TLI Y +G D L + M+ G++ ++ YN++ + + R + K +
Sbjct: 402 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 461
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + G+SPN ++ +L+ Y + + V+REM+EKG ++ YN L+ +
Sbjct: 462 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 521
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++ ++++ + PD +T +S+I GKV A +F+EM + G PN+
Sbjct: 522 RGNMKEAHKLKDELE-NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 580
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
T++I K R+++ + + + E G+TPDD
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDD 614
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI + G + ++EEM+ G++ ++ Y +++ R+ + ++ EMT
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D GL P+ +TY +L+ +A E + EM+ KG+ L+ ++NTL+ + G D
Sbjct: 362 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 421
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA + + + + + D + ++S+ + +C K EA+ + M+E G PN T+
Sbjct: 422 EALRL-QVVMEKKGLESDVFAYNSIASGLCKLNRK-DEAKGLLFSMVERGVSPNTMSFTT 479
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI Y K + R + E G P+
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPN 508
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + D ++++I +GN L +++EM G+ P+ TY L+ + +A +
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 385
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM G+ N + +L+ Y + ++ L + M++KG++ V YN++
Sbjct: 386 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 445
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + DEA + M P++ +F+++I I G EA+ +F EM E G
Sbjct: 446 ASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 504
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
PN+ LI Y K + + + L G+ PD C L++
Sbjct: 505 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIH 552
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 37/153 (24%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPW 160
+ PN +F+TLI +Y GNF V+ EM+ G PN+ITYN L+D G K
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529
Query: 161 QVK--------------------------------TIYKEMTDNGLSPNWNTYASLLRAY 188
++K ++ EM GL PN TY +++
Sbjct: 530 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 589
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ E+ +Y EMKE G+ T+Y++L+
Sbjct: 590 SKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 622
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ I+ Y + G + M+ GV N++TY L+ + + + +++EM
Sbjct: 267 YNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMR 326
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ + Y S++ R+ + L ++ EM +KG+ S Y L+ G +
Sbjct: 327 EKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQME 386
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A + +M+ + + F+++I G V EA + M + G E ++F S+
Sbjct: 387 AAQMLVNEMQ-GKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 445
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
K R D+ L + E G++P+
Sbjct: 446 ASGLCKLNRKDEAKGLLFSMVERGVSPN 473
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 117/271 (43%), Gaps = 25/271 (9%)
Query: 82 PKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
P + AS + + +++ K++ F L ++Y F L +E M+ G
Sbjct: 135 PVTVIASLVDDACNESKCNRAKFK--EKFFDLLFRVYADNKMFGEALEAFEHMEKKGFH- 191
Query: 142 NMITYNNLLDTMGRAKRPWQVKT---IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
I + L + +R QV + ++ M + L Y+ + G + G+ +
Sbjct: 192 --IDERSCLVYLLALRRGGQVDSCLRFFRRMVN--LDVEVTVYSLTIVLDGLCKRGDVEM 247
Query: 199 S--VYREMKEKGMQLSVTLYNTLLA---MCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ E+ KG++ +V YN + D+G E + E E + T++
Sbjct: 248 GRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLME----KEGVACNVVTYT 303
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I S GK+ EA+ +F EM E G E +++V TS+I C R+ +V RAL E+
Sbjct: 304 LLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISC---NCRSGNVKRALVLFDEM 360
Query: 314 ---GITPDDRFCGCLLNVMTQTPKEELGKLV 341
G+ P G L++ + + + E +++
Sbjct: 361 TDKGLIPSAHTYGALIHGVCKAGQMEAAQML 391
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 118/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ + N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++KS +N D + I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELKSPDNIPRD-----TAIHILAGAGRIEEATYVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +++ +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYANLIEVFDKMRGLGYFPDSNVIALVLN 398
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K + +V YN+++ +
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGK 231
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 232 TLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQV 290
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD 324
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIVQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + + +A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
IF +K S PD +++MI + EA ++ +EM AG PN ++L+
Sbjct: 64 ISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 122
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
Y + ++ + + + + E+ D C +++V Q
Sbjct: 123 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ LI AG + L ++ +M P + TY L+ + + R + ++ EM
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G PN +TY L+ + ++ + EM EKG+ SV YN L+ G
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D+AFEI D+ S +C P++ T++ +I + KV +A A+ N+MLE P+L S
Sbjct: 386 DDAFEIL-DLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI K + R L+ + E G+ PD ++ + + + EE G L + V+
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504
Query: 349 SKLGYVV 355
K V+
Sbjct: 505 VKANEVI 511
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
VY E+ + PN+ T+N +++ + + + ++ GL P+ TY SL+ +
Sbjct: 181 VYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHC 240
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
R + ++ V+ M +KG Q + Y L+ + G +EA ++F DM + +NC P
Sbjct: 241 RNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM-TEDNCCPTV 299
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ +I S G+ EA +FNEM E G EPN+ T LI K + D+ + L+
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Query: 310 LPELGITP 317
+ E G+ P
Sbjct: 360 MSEKGLIP 367
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 13/261 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S I G + +++ +KA GVK N + Y L+D + + ++ + M
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++ PN TY L+ + + ++ S+ +M G++ +V Y L+ G D
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A ++F M S QPD T+++ + +G + E + + +M E G P+L T L
Sbjct: 597 HALKVFNHM-VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVL 655
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL------NVMTQTPKEELGKLVECV 344
I Y + T L + + G P L+ N M +T + E+G +
Sbjct: 656 IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET-RSEIG-----I 709
Query: 345 EKSNSKLGYVVKLLLEEQDIE 365
+ ++ L Y + L L E+ +E
Sbjct: 710 DSVSNTLEYEIALKLFEKMVE 730
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 103/247 (41%), Gaps = 21/247 (8%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+ D A+ + I P+ ++ LI Y G + + M G KP++ + L
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSIL 690
Query: 150 LDTMGRAKRPWQVKT------------------IYKEMTDNGLSPNWNTYASLLRAYGRA 191
+ + R + ++ ++++M ++G + + + Y +L+ + +
Sbjct: 691 IKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQ 750
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
E+ + MKE+GM S +YN+LL C +G EA + + M + P +
Sbjct: 751 ERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVEN-GLLPLLES 809
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+ ++ G +A+A+F+ +L G+ + LI K D+ ++ +
Sbjct: 810 YKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIME 869
Query: 312 ELGITPD 318
E G P+
Sbjct: 870 EKGCQPN 876
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 1/151 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
ID + + LI + + + MK G+ P+ YN+LLD + + +
Sbjct: 735 IDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRL 794
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M +NGL P +Y L+ E +V+ + G + L+
Sbjct: 795 VDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLK 854
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
DE E+ D+ + CQP+ T+S +I
Sbjct: 855 RDLVDECSELI-DIMEEKGCQPNPLTYSLLI 884
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+K+YG A F ++++ M+ ++ N++TYN ++ G++
Sbjct: 337 KMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHE 396
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+A + ++++++ G+++ LY T++
Sbjct: 397 KATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 456
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + D+K C PD + I I + G++ EA +F + +AG
Sbjct: 457 VAYERAGLVAHAKRLLHDLK----C-PDIIPRDTAIKILARAGRIEEATWVFRQAFDAGE 511
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I+ + + +R +VV ++ G PD +LN
Sbjct: 512 VKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLN 558
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y F L+V+ EM +++T N ++D G+ + ++
Sbjct: 273 DTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLF 332
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LL+ YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 333 WSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKS 392
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M+ +P++ T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 393 LEHEKATNLVQEMQ-KRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVL 451
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L I P D
Sbjct: 452 YQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRD 484
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++++I ++G A F + EM+ +GV P+ ++Y+ LL ++ + +++
Sbjct: 238 DLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVF 297
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + S + T ++ YG+ ++ ++ M++ G++ +V YNTLL + +
Sbjct: 298 AEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEA 357
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F M+ E + + T+++MI I + +A + EM + G EPN
Sbjct: 358 ELFGEAIHLFRLMQRKE-IEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAIT 416
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++I +GKA + D +L G+ D
Sbjct: 417 YSTIISIWGKAGKLDRAAMLFQKLRSSGVEID 448
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++ YN +L + RAK+ ++ EM LSP+ TY++L+ ++G+A +++L
Sbjct: 132 PSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFW 191
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
++M++ + + LY+ L+ + + +A IF +K S PD ++SMI +
Sbjct: 192 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRS-GITPDLVAYNSMINVFG 250
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EA + +EM E G P+ ++L+ Y + ++ + + + E + D
Sbjct: 251 KARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLM 310
Query: 321 FCGCLLNVMTQ 331
C +++V Q
Sbjct: 311 TCNIMIDVYGQ 321
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G AG FD L ++M+ V +++ Y+NL++ + + +I+
Sbjct: 168 DRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIF 227
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G++P+ Y S++ +G+AR + + EM+E G
Sbjct: 228 MRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVG------------------ 269
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
PD+ ++S+++++ K EA ++F EM EA +L
Sbjct: 270 ------------------VLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMT 311
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+I YG+ + R + ++GI P+ LL V
Sbjct: 312 CNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKV 353
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 48/209 (22%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T IK+ AG + V+ + G ++ + +++ R KRP V ++++M
Sbjct: 485 TAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGA 544
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G P+ + A +L AYG+ R E +VYREM+E+
Sbjct: 545 GYFPDSDVIALVLNAYGKLREFEKADAVYREMQEE------------------------- 579
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL------FV 286
E PD F M+++ R E++F ++ +PN+ V
Sbjct: 580 ----------ECVFPDEVHF-QMLSLYGARKDFIMVESLFEKL---DSDPNINKKELHLV 625
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ S+ Y + R +D R +NR+ + G+
Sbjct: 626 VASI---YERQNRLNDASRIMNRMSKEGM 651
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ I YG +G + +E+MK G+ PN++ N L ++ R + K + +
Sbjct: 440 YILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLK 499
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL+P+ TY L+R YG+A +D + + EM+E G V + N+L+ D
Sbjct: 500 KCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVD 559
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+++F+ MK + P T+++++ G+V EA A+F M+ PN +L
Sbjct: 560 EAWKMFQRMKEMK-LAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTL 618
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ C K D ++ L R+ E+ PD
Sbjct: 619 LDCLCKNGEVDLALKMLFRMTEMNCFPD 646
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TL+ + G+ D + EM+A G P+++T+ L+D + + + +
Sbjct: 331 DRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTL 390
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G++PN +TY +L+ R ++ L ++ M+ G++ + Y +
Sbjct: 391 DVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKS 450
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + +A + FE MK++ P+ ++ + + +G++ EA+ FN + + G P+
Sbjct: 451 GESGKAIKTFEKMKTN-GIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAIT 509
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L++CYGKA R DD ++ L+ + E G P+ L++ + + +
Sbjct: 510 YNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR 557
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R + ++ ++ LI L +G L VY M + G+KP++ TY+ L+ +G+ +
Sbjct: 182 KMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRR 241
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
V + +EM GL PN T+ +R GRA ++ + + M + G V Y
Sbjct: 242 DIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYT 301
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ + G + A E+F MK+S + +PD T+ +++ S G + + ++EM
Sbjct: 302 VLIDALCNAGKLNNAKELFLKMKASSH-KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEA 360
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ P++ T LI K + D+ L+ + + G+ P+
Sbjct: 361 DGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPN 401
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ +N D ++ + G +G ++YEEM G KPN IT+N ++ + ++
Sbjct: 813 KMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSN 872
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ +Y ++ SP TY L+ + E+ + EM + G + LYN
Sbjct: 873 SLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYN 932
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G + A E+F M E +PD ++S M+ GKV +A F E+
Sbjct: 933 ILMNGFGKQGDVETACELFRRM-VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEE 336
+G +P+L +I G++QR ++ + + + GITPD + +LN+ EE
Sbjct: 992 SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051
Query: 337 LGKLVE 342
GK+ E
Sbjct: 1052 AGKMYE 1057
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI G D + MK GV PN+ TYN L+ + R R + ++
Sbjct: 366 DVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELF 425
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M GL TY + YG++ + + +MK G+ ++ N L A+
Sbjct: 426 NSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQ 485
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA E F +K PD+ T++ ++ G+V +A + +EM E G +P + +
Sbjct: 486 GRLEEAKEFFNGLKKC-GLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVI 544
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ SLI KA R D+ + R+ E+ + P
Sbjct: 545 INSLIDTLYKADRVDEAWKMFQRMKEMKLAP 575
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 89/158 (56%), Gaps = 1/158 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R E R D ++S ++ G D L+ +EE+K G+ P+++ YN +++ +GR++
Sbjct: 953 RMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQ 1012
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + +++ EM + G++P+ TY +L+ G A E+ +Y E++ KG++ +V YN
Sbjct: 1013 RVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYN 1072
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
L+ + G D A+ +++ M C+P++ TF+ +
Sbjct: 1073 ALIRGHSMSGNPDRAYAVYKKMMVG-GCRPNTGTFAQL 1109
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 108 PNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + I ++G + + D +++Y ++ + P TY L+D + + R + K
Sbjct: 856 PNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQF 915
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM D G PN Y L+ +G+ E ++R M ++G++ + Y+ ++
Sbjct: 916 FEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCM 975
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG D+A FE++K S PD ++ MI +V EA ++F+EM G P+L+
Sbjct: 976 VGKVDDALHYFEELKLS-GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLY 1034
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI G A ++ + L G+ P+
Sbjct: 1035 TYNALILNLGIAGMVEEAGKMYEELQLKGLEPN 1067
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 1/218 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E + +S L+ G + + + + +EM+++G++PN+ T+ + +GRA
Sbjct: 217 RMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + I K M D G P+ TY L+ A A + ++ +MK + Y
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TLL +D G D E + +M+ ++ PD TF+ +I GKV EA + M +
Sbjct: 337 TLLDKFSDHGDLDAIKEFWSEME-ADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKK 395
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
G PNL +LI + R D+ + N + LG+
Sbjct: 396 QGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGL 433
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P + LI G + +EEM G PN YN L++ G+ +++
Sbjct: 893 PWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFR 952
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M G+ P+ +Y+ ++ +D L + E+K G+ + YN ++
Sbjct: 953 RMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQ 1012
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+EA +F++M++ PD +T++++I G V EA M+ E+ G EPN+F
Sbjct: 1013 RVEEALSLFDEMRN-RGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTY 1071
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI+ + + D ++ G P+
Sbjct: 1072 NALIRGHSMSGNPDRAYAVYKKMMVGGCRPN 1102
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D + L+K G NV+ ++ K+ + P++ YN+L+D + +A+ +
Sbjct: 751 DDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGL 810
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + G +P+ TY L A G++ ++ +Y EM +G + + +N ++
Sbjct: 811 FYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK 870
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D+A +++ D+ S + P WT+ +I G++ EA+ F EML+ G PN
Sbjct: 871 SNSLDKAIDLYYDLMSGD-FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCP 929
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ L+ +GK + R+ + GI PD
Sbjct: 930 LYNILMNGFGKQGDVETACELFRRMVKEGIRPD 962
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 98/200 (49%), Gaps = 2/200 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L++ YG AG D + + EM+ G P ++ N+L+DT+ +A R + ++
Sbjct: 506 DAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMF 565
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + L+P TY +LL G+ ++ ++++ M + +NTLL
Sbjct: 566 QRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKN 625
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A ++ M + NC PD T++++I +V+ A +F++M + + P+
Sbjct: 626 GEVDLALKMLFRM-TEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIY-PDYVT 683
Query: 287 LTSLIQCYGKAQRTDDVVRA 306
L +L+ K R +D R
Sbjct: 684 LCTLLPGVIKDGRIEDAFRV 703
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 106/234 (45%), Gaps = 3/234 (1%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
N + T+ K+ G E+M+ +G N +Y L+ + ++ + +Y+
Sbjct: 158 NTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRR 217
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ P+ TY++L+ A G+ R E + + +EM+ G++ ++ + + + G
Sbjct: 218 MVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGK 277
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
DEA+ I + M + C PD T++ +I GK++ A+ +F +M + +P+
Sbjct: 278 IDEAYGILKRMDDA-GCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKL 340
+L+ + D + + + G PD L++ + + K E G L
Sbjct: 337 TLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTL 390
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF IK + AG + V+E M+ G + ++N LL + + + ++
Sbjct: 2 DAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDR 61
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D +P+ +Y +L+ A+ AR + V+ EM E G++ V ++NT++
Sbjct: 62 MRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQR 120
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
EA ++FE MK+ + P+ WT++ +I RGK+ A F EM + G +P++ T
Sbjct: 121 RPEAVKMFELMKA-KGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYT 179
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
L+ YG A+R D V L + + G PD R L+ ++T
Sbjct: 180 CLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLT 221
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+++ D +++ L+ + A N V+ EM G+KP+++ +N +++ + R +R +
Sbjct: 64 DRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPE 123
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+++ M G +PN TY L+R + + + + + EM++ G Q V Y LL
Sbjct: 124 AVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLV 183
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ D + E+M + + C PD T++++I + + R +A ++ +M++ G E
Sbjct: 184 GYGNAKRMDRVTALLEEM-TQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLE 242
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRAL-NRLPELGITPDDRFCGCLLN--VMTQTPKEELG 338
P + +++ Y R + A+ + GI PD +N + P+E
Sbjct: 243 PTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACK 302
Query: 339 KLVECVEKS 347
+ E ++K
Sbjct: 303 YIEEMIQKG 311
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 6/198 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI+ + G D + +EEM+ +G +P++ TY LL G AKR +V +
Sbjct: 138 PNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTAL 197
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA--MC 223
+EMT G P+ TY +L++ +D +Y++M +KG++ ++ YN ++
Sbjct: 198 LEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFL 257
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
Y ++E+M C PD +++ I G+ EA EM++ G +
Sbjct: 258 GGRNYM-MGCAVWEEMHRKGIC-PDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTP 315
Query: 284 LFVLTSLIQCYGKAQRTD 301
+ KA + D
Sbjct: 316 QIDYNKFAADFSKAGKPD 333
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D ++ LIKL D +Y++M G++P + TYN ++ + R + + +
Sbjct: 209 DGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAV 268
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM G+ P+ N+Y + + R E+ EM +KGM+ YN A +
Sbjct: 269 WEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSK 328
Query: 226 VGYTDEAFEIFEDMK 240
G D +E+ + +K
Sbjct: 329 AGKPDILYELAQKVK 343
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 9/288 (3%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E+++D ++ + + +++L+ G G+ G + ++ +MKA G+ N +TY L++
Sbjct: 222 ERAFDFVGKSRSF-TNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIE 280
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+G A R V +Y EM DN + + T ++L +A E ++++MK KG+
Sbjct: 281 RLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNA 340
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
YN L+ G D A + +M+ + C P+ T++++I+ +S A +
Sbjct: 341 DTVTYNILINGLGRAGKLDAAGALLLEMEEN-GCAPNIITYNTLISSYGKWSNLSAATRL 399
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
F EM E G PN+ +SLI+ +GKA RTD + + G P+ L++ + +
Sbjct: 400 FLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIR 459
Query: 332 TPKEELGKLVECVEK---SNSKLGYVVKLLLEEQDIEGDFKKEATELF 376
+ G +E + + + ++G V K LL I + +EA F
Sbjct: 460 AGR--FGAAMEYLREMRDAGCQMGKVTKSLLVR--IPPQYMEEAQSFF 503
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 35/245 (14%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKP------------------------ 141
PN F+ +++ +G+AG D +++++M G++P
Sbjct: 168 PNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDF 227
Query: 142 --------NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
N +TYN+LL ++GR + ++ +M GL N TYA L+ G A
Sbjct: 228 VGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGR 287
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
ED +Y EM + ++ + N +L + G + AFE+F+DMK + D+ T++
Sbjct: 288 VEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMK-FKGLNADTVTYN 346
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I GK+ A A+ EM E G PN+ +LI YGK R + E
Sbjct: 347 ILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKER 406
Query: 314 GITPD 318
G+ P+
Sbjct: 407 GVAPN 411
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ ++ ++D F+TLI +YG A + L G +P TY++++ +
Sbjct: 22 QKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDV 81
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+YK+M P+ T+ L+ + +A E+ +V+ +M + + V Y L
Sbjct: 82 QNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTIL 141
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ +G D ++FE M +++ CQP+ +T+ S++ G+V EA +F +M++ G
Sbjct: 142 IRSLGTIGRIDAVMKLFESM-TAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKG 200
Query: 280 FEPNLFVLTSLIQCYGK 296
+P+ LI +GK
Sbjct: 201 LQPDAVTYNILIDAFGK 217
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
K+ D F+ LI A + NV+ +M + V P++ TY L+ ++G R V
Sbjct: 95 KFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAV 154
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+++ MT G PN TY S++ A+G A ++ ++++M +KG+Q YN L+
Sbjct: 155 MKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDA 214
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G + AF+ +S N T++S+++ +G + +F +M G
Sbjct: 215 FGKTGQLERAFDFVGKSRSFTN----EVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVS 270
Query: 283 NLFVLTSLIQCYGKAQRTDDV 303
N LI+ G A R +DV
Sbjct: 271 NELTYAILIERLGWAGRVEDV 291
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
++ L G A +D + E M+ K + +N L+ G A + T G
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
P TY+S+++ + + ++ L +Y++M + T +N L+ A +EA
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
+F DM N PD +T++ +I G++ +F M G +PNLF S++
Sbjct: 121 NVFGDM-FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHA 179
Query: 294 YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
+G A R D+ ++ + G+ PD L++ +T + E + + V KS S
Sbjct: 180 FGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLE--RAFDFVGKSRS 233
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 112/234 (47%), Gaps = 6/234 (2%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
+ + EK+ T A K P A+ S++I+++ G+ L +Y++M P+ T
Sbjct: 43 ANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTT 102
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+N L+D++ +A + + ++ +M +SP+ TY L+R+ G + + ++ M
Sbjct: 103 FNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMT 162
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+G Q ++ Y++++ G DEA +IF+ M + QPD+ T++ +I GK
Sbjct: 163 AQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQM-VQKGLQPDAVTYNILI---DAFGKT 218
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ E F+ + ++ N SL+ G+ ++ ++ G+ ++
Sbjct: 219 GQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNE 272
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++S+LI+ +G AG D ++++ EMKA G PN +TYN L+D + RA R
Sbjct: 408 VAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAM 467
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+EM D G T + L+R +Y E+ S ++E
Sbjct: 468 EYLREMRDAGCQMGKVTKSLLVRI--PPQYMEEAQSFFQE 505
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 2/195 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L++ +M GVKP +I+YN ++ G+ Q + +EM + GL P+ T+ S + A
Sbjct: 477 LSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAA 536
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ +D + + REM G+ Y++ L A G ++A + +M+ + P
Sbjct: 537 LSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGA-GVSP 595
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+++ I C GK EA + EM AG PNLF ++ I GK R + + L
Sbjct: 596 TVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALL 655
Query: 308 NRLPELGITPDDRFC 322
N +P LG+TP++ FC
Sbjct: 656 NEMPALGLTPNE-FC 669
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I G G D L + EM G+ P++IT+N+ + + + RP + +EM
Sbjct: 495 YNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMP 554
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G++ + TY+S L A E LS+ REM+ G+ +V Y + C + G D
Sbjct: 555 RAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGD 614
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + +M ++ P+ +++S+ I+ C G+ + A+ NEM G PN F T+
Sbjct: 615 EALLLLREMPTA-GVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAA 673
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
I G + + V + GI P
Sbjct: 674 ITGCGIGGQWERAVATFRSMIASGIQP 700
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
Query: 71 GSSPKSYIWVNPK---SPRASKLKEKSYDTR-ARNEKWRIDPNAFSTLIKLYGTAGNFDG 126
G+ P SY VN +A +++E R AR +D +++ I T G+++
Sbjct: 154 GAMPNSYC-VNAALDACGKAGRVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWEL 212
Query: 127 CLNVYEEMKA-IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
L++ EM+A G+KPN ITY + GR + + ++ EM D G+ + Y+++
Sbjct: 213 ALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVF 272
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
A+ R + + S RE+ + ++ +V YN + C D G +EA ++ M+
Sbjct: 273 NAFRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGV 332
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+PD T++ ++ C G+ +A +F EM E G +P++ T+ I G +++ +
Sbjct: 333 EPDVVTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALS 392
Query: 306 ALNRLPELGITPD 318
+ G+ P+
Sbjct: 393 IFREMERAGVRPN 405
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 114/233 (48%), Gaps = 18/233 (7%)
Query: 104 WRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPW 160
W + PN F+ I G ++ L++ M+ +G V+P+++TYN ++ G+A +
Sbjct: 294 WPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGE 353
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ I++EM++ G+ P+ ++ + + A G E+ LS++REM+ G++ ++ +N ++
Sbjct: 354 KAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVM 413
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQ---------------PDSWTFSSMITICSCRGKV 265
+ C G +EA + F ++ D+ ++++ ++ C +
Sbjct: 414 SACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQW 473
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A ++ +M + G +P + ++I GK D + L +PE G+ PD
Sbjct: 474 GRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPD 526
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 113/252 (44%), Gaps = 5/252 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++ I +G D + + EM GV + ITY++ L + A R Q ++
Sbjct: 526 DVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLL 585
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G+SP Y + +RA G A G++ L + REM G+ ++ Y+ ++ C
Sbjct: 586 REMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKD 645
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++ + +M + P+ + +++ IT C G+ A A F M+ +G +P +
Sbjct: 646 GRWEQGLALLNEMPAL-GLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVG 704
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLP-ELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
TS + D + L+ + E GI P+++ V+ G LV V+
Sbjct: 705 YTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQT---YAAVILACGNGGQGHLVAQVQ 761
Query: 346 KSNSKLGYVVKL 357
+ + G +L
Sbjct: 762 RDMASAGITPRL 773
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ I+ G AG D L + EM GV PN+ +Y+ + G+ R Q + EM
Sbjct: 600 YTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMP 659
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL+PN Y + + G E ++ +R M G+Q +V Y + ++ A G D
Sbjct: 660 ALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVD 719
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ +MK +P+ T++++I C G+ + +M AG P L S
Sbjct: 720 LALELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSA 779
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
I+ G+ + L + G+ P
Sbjct: 780 IRASGECGNWSEATSLLGEMEAAGVPP 806
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKA-IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ + G D L + EMK G++PN TY ++ G + V + ++M
Sbjct: 705 YTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDM 764
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G++P Y S +RA G + S+ EM+ G+ +V+ YN + C G
Sbjct: 765 ASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKW 824
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
EA ++ ++M + DS T S+ I+ C G+ +A + EMLE E
Sbjct: 825 QEALDLLDEMP-GKGLVRDSGTLSAAISACQKAGRGVKAAGLVEEMLEMARE 875
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 3/179 (1%)
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
KA + Y+ + M + R + I M + G PN + L A G+A
Sbjct: 116 KAPAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRV 175
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ L + R+ + G++L V YN + C G + A + +M++ +P+ T+ +
Sbjct: 176 QEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQA 235
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
I +C GK EA ++ EM + G V +++ + +R D A + L E+
Sbjct: 236 AIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAF---RRVDHWQAAASTLREI 291
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 91/227 (40%), Gaps = 36/227 (15%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L++ M +G PN N LD G+A R + + ++ +G+ + +Y + A
Sbjct: 144 LDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLMRDARASGIELDVVSYNCAIPA 203
Query: 188 YGRARYGEDTLSVYREMK-EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE--- 243
E LS+ REM+ E G++ + Y + +C G DEA + +MK
Sbjct: 204 CVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPL 263
Query: 244 ---------NC--QPDSW------------------TFSSMITICSCR--GKVSEAEAMF 272
N + D W F+ + IC+C G+ EA +
Sbjct: 264 KTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLL 323
Query: 273 NEMLE-AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ M E G EP++ ++ GKA + + + + E+GI PD
Sbjct: 324 HFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPD 370
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 125/251 (49%), Gaps = 21/251 (8%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
ASK+ EK++ ++ I P+ + +TLI + AG + N ++EM+ G PN++
Sbjct: 235 ASKV-EKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVV 293
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY L+ ++++ + +Y+ M G +PN TY +L+ +A E +Y+ M
Sbjct: 294 TYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353
Query: 205 KEKGMQL-----------------SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
K++ +++ +V Y L+ EA ++ + M S E C+P
Sbjct: 354 KKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSM-SVEGCEP 412
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ + ++I C GK+ EA+ +F MLE G++PN++ +SLI K +R D ++ L
Sbjct: 413 NHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVL 472
Query: 308 NRLPELGITPD 318
+++ E P+
Sbjct: 473 SKMLENSCAPN 483
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G F+ NV EM + G P+ TY+ ++ + A + + +++EM NG++P+ Y
Sbjct: 201 GKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVY 260
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+L+ ++ +A + E + + EM+ G +V Y L+ +A E++E M
Sbjct: 261 TTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE-MML 319
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE-----------------AGFEPNL 284
S+ C P+ T++++I GK+ +A ++ M + A EPN+
Sbjct: 320 SKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNV 379
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F +L+ KA + + L + G P+
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPN 413
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 107 DPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DPN + S+LI D L V +M PN++ Y ++D + + + +
Sbjct: 446 DPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 505
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ M + G +PN TY +++ +G++ E L + ++M KG + Y L+ C
Sbjct: 506 LMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCC 565
Query: 225 DVGYTDEAFEIFEDMKSS 242
G DEA ++ E+MK +
Sbjct: 566 STGLLDEAHKLLEEMKQT 583
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E++ D ++ +I A F+ ++ M+A PN++TY LL ++ +
Sbjct: 36 EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGR 95
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRA------------------------------ 191
K I M G P+ + SL+ AY R+
Sbjct: 96 CKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIG 155
Query: 192 ------RYGEDTLSV----YREMKEKGMQLS-VTLYNTLLAMCADVGYTDEAFEIFEDMK 240
G+D L + Y EM E G+ L+ V + N +C +G ++A+ + +M
Sbjct: 156 GICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCG-IGKFEKAYNVIREMM 214
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
S+ PD+ T+S +I KV +A +F EM G P+++V T+LI + KA
Sbjct: 215 -SKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFI 273
Query: 301 DDVVRALNRLPELGITPD 318
+ + + G P+
Sbjct: 274 EQARNWFDEMERDGCAPN 291
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 4/235 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-R 158
+ E R D + +I G AG D + +++EM+ + P+++TYN ++ + +K R
Sbjct: 1317 QREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSR 1376
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+V + ++ M ++G+SP+ TY+ L+ + + E + + EM EKG Y +
Sbjct: 1377 ASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCS 1436
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSW-TFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ D A E+F+++K ENC S ++ MI G++ +A MF+EM +
Sbjct: 1437 LIDALGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNK 1494
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
G P+++ +L+ + D+ + + R+ E G PD +LN + +T
Sbjct: 1495 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKT 1549
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 2/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN + P S ++++ G A + ++ ++K +P YN+++ + +
Sbjct: 1141 RNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQY 1200
Query: 160 WQVKTIYKEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+V +Y EM+ G P+ TY++L+ A+ + + + + EMKE GMQ + +Y
Sbjct: 1201 EKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTM 1260
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+A+ A +FE+M+ + C+PD +T++ +I G++ EA F EM
Sbjct: 1261 LIALFFKFNDAHGALSLFEEMR-HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQRE 1319
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P+ + ++I GKA R DD ++ + L P
Sbjct: 1320 GCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIP 1358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + G D + + EMK IG++P Y L+ + +++
Sbjct: 1219 DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF 1278
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM P+ TY L+R G+A ++ + EM+ +G + N ++
Sbjct: 1279 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 1338
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++F++M++ C P T++++I + + + SE + F M E+G P+ F
Sbjct: 1339 GRLDDAMKLFQEMETL-RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 1397
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ LI + K R + + L + E G P
Sbjct: 1398 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 1429
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A +D +++E+K + Y ++ +G+A R ++
Sbjct: 1431 PAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFD 1490
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G +P+ Y +L+ R ++ LS R M+E G + YN +L A G
Sbjct: 1491 EMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTG 1550
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+ +MK S +PD ++++++ S G EA + EM GFE +L
Sbjct: 1551 GPHRAMEMLSNMKQS-TVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITY 1609
Query: 288 TSLIQCYGK 296
+S+++ GK
Sbjct: 1610 SSILEAIGK 1618
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 34/303 (11%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
A++++I + G ++ +Y EM G P+ +TY+ L+ + R +
Sbjct: 1185 QAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLN 1244
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM + G+ P Y L+ + + LS++ EM+ + + V Y L+ G
Sbjct: 1245 EMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAG 1304
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA+ F +M+ E C+PD+ ++MI G++ +A +F EM P++
Sbjct: 1305 RIDEAYHFFCEMQ-REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTY 1363
Query: 288 TSLIQC-YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
++I+ + R +V R+ E GI+P L++ +T + +EK
Sbjct: 1364 NTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNR---------MEK 1414
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
+ +LLEE D +G AYC+ LID + AC+
Sbjct: 1415 A--------MMLLEEMDEKG-------------FPPCPAAYCS-LIDALGKAKRYDLACE 1452
Query: 407 LLE 409
L +
Sbjct: 1453 LFQ 1455
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 123/307 (40%), Gaps = 43/307 (14%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS-LLRAYGRARYGEDTLSVYRE 203
TY L+ + ++ ++ + +EM N + T S ++R G A+ ++++ +
Sbjct: 1115 TYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQ 1174
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+K + Q YN+++ M G ++ +++ +M + +C PD+ T+S++I+ G
Sbjct: 1175 IKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLG 1234
Query: 264 KVSEAEAMFNEMLEAGFE-----------------------------------PNLFVLT 288
+ A + NEM E G + P++F T
Sbjct: 1235 RRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 1294
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE-- 345
LI+ GKA R D+ + G PD F ++N + + + ++ KL + +E
Sbjct: 1295 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 1354
Query: 346 ---KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLE 402
S ++K L E + + + S Y + LID N +E
Sbjct: 1355 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY-SILIDGFCKTNRME 1413
Query: 403 NACKLLE 409
A LLE
Sbjct: 1414 KAMMLLE 1420
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 69 KTGSSPKSYIWVNPKS--PRASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFD 125
K G +P Y + S R L E R E I D N+++ ++ G
Sbjct: 1494 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 1553
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + MK V+P++++YN +L + A + + KEM G + TY+S+L
Sbjct: 1554 RAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSIL 1613
Query: 186 RAYGRARY 193
A G+ +
Sbjct: 1614 EAIGKVDH 1621
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 3/214 (1%)
Query: 107 DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+P+ FS T++ +G ++ + E+M P+++TYN+L+D + + + +
Sbjct: 229 EPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAER 288
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ ++M +P TY +L+ + RA D V +M + G+ + YN LL
Sbjct: 289 LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA E+ E M ++C PD T+S ++ GKV +A + MLE G +PNL
Sbjct: 349 KAGKLEEAHELLEVM-VEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I + KA + D+ + L + E+ TPD
Sbjct: 408 VTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+T+I + AG D V E MK + P+++TY+ L+D +A R I
Sbjct: 405 PNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI 464
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
G+SP+ +Y+S+L E+ V M ++G + + Y ++ D
Sbjct: 465 L------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCD 518
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
V DEA ++ + M S C+P+ +T+S +I +C + +V +A + + MLE G P++
Sbjct: 519 VERGDEALKMLQVM-SERGCEPNLYTYSILINGLCKTK-RVEDAINVLDVMLEKGCVPDV 576
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
TSLI + K + D + + + G PD
Sbjct: 577 ATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPD 610
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 22/267 (8%)
Query: 69 KTGSSPK--SYIWVNPKSPRASKLKEKSYDTRARNEK-WRIDPNAFSTLIKLYGTAGNFD 125
K G SP +Y + +A KL+E EK D +S L+ G D
Sbjct: 330 KAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVD 389
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ E M G +PN++T+N ++D +A + + + + M + +P+ TY++L+
Sbjct: 390 DARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLI 449
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y +A +D ++ G+ Y+++L G +EA E+ D+ + + C
Sbjct: 450 DGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVM-DLMTKQGC 502
Query: 246 QPDSWTFSSMI-TICSC-RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
P S ++ +I +C RG EA M M E G EPNL+ + LI K +R +D
Sbjct: 503 PPTSSHYALIIGGLCDVERG--DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDA 560
Query: 304 VRALNRLPELGITPD--------DRFC 322
+ L+ + E G PD D FC
Sbjct: 561 INVLDVMLEKGCVPDVATYTSLIDGFC 587
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI D + E+MK G+ P+ + YN LL+ + + + +V +
Sbjct: 161 DVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLL 220
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + G P+ +Y +++ + E+ + +M EK V YN+L+ V
Sbjct: 221 EEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKV 280
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA + EDM C P T++++I S ++++A + +M +AG P+L
Sbjct: 281 SKMDEAERLLEDM-VGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVT 339
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ KA + ++ L + E PD
Sbjct: 340 YNCLLDGLCKAGKLEEAHELLEVMVEKDCAPD 371
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 12/239 (5%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + LI + AGN L + EM A P++IT+N +L K Q+ + +
Sbjct: 25 STYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL------KAYCQIGDLDRA 78
Query: 169 MTD-NG---LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ G SP TY L+ + + ++ + EM +K +YN L+A
Sbjct: 79 LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G D A + + M +C PD T++S+I C + EA + +M E+G P+
Sbjct: 139 KMGKIDAARNVLK-MMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDT 197
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
+L+ K + ++V + L + E G PD ++ + ++ K EE GK++E
Sbjct: 198 VAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILE 256
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 40/281 (14%)
Query: 100 RNEKWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + W P AF+ I ++G D + +EM P+ YN L+ + +
Sbjct: 83 RGKMW-CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM-------- 209
+ + + K M + P+ TY SL+ + ++ + +MKE G+
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201
Query: 210 -------------QLSVTL--------------YNTLLAMCADVGYTDEAFEIFEDMKSS 242
++S L YNT++A + G +EA +I E M
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM-IE 260
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ C PD T++S++ K+ EAE + +M+ P + T+LI + +A R D
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLAD 320
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
R + + + GI+PD CLL+ + + K EE +L+E
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLE 361
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 8/206 (3%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
KP+ TY L+ RA V I EM SP+ T+ ++L+AY + + LS
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 200 VYREMKEKGMQLSVTL--YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+R M S T Y L+ DEA+++ ++M ++C PD+ ++ +I
Sbjct: 81 HFR----GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEM-IQKDCHPDAAVYNCLIA 135
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
GK+ A + MLE P++ TSLI + D+ + + ++ E G+TP
Sbjct: 136 GLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTP 195
Query: 318 DDRFCGCLLN-VMTQTPKEELGKLVE 342
D LLN + Q EE+ KL+E
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLE 221
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 140/328 (42%), Gaps = 13/328 (3%)
Query: 105 RIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R P+ + T++K Y G+ D L+ + + P TY L+ + + +R +
Sbjct: 54 RFSPDVITHNTILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEA 111
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM P+ Y L+ + + +V + M E+ V Y +L+
Sbjct: 112 YQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVG 171
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C DEA ++ E MK S PD+ +++++ + ++ E + EM+EAG EP
Sbjct: 172 CCQTNALDEARKLMEKMKES-GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREP 230
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLV 341
+ F +++ C ++ + ++ + L ++ E PD L++ + K +E +L+
Sbjct: 231 DTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLL 290
Query: 342 ECVEKSNSKLGYVVKLLL----EEQDIEGDFKKEATELFNS-ISKDVKKAYCNCLIDLCV 396
E + + L D D + ++F + IS D+ NCL+D
Sbjct: 291 EDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTY--NCLLDGLC 348
Query: 397 NLNLLENACKLLELGLTLEVYTDIQSRS 424
LE A +LLE+ + + D+ + S
Sbjct: 349 KAGKLEEAHELLEVMVEKDCAPDVVTYS 376
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S++++ + G + V + M G P Y ++ + +R + +
Sbjct: 470 DKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKML 529
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M++ G PN TY+ L+ + + ED ++V M EKG V Y +L+ +
Sbjct: 530 QVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKI 589
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D A++ F+ M+ S C+PD ++ +I+ G V +A + MLE G P+
Sbjct: 590 NKMDAAYQCFKTMRDS-GCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAAT 648
Query: 287 LTSLIQ 292
SL++
Sbjct: 649 YFSLMR 654
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E PN +++T+I Y + GN +G + + M+ G++P+ TY +L+ M + R
Sbjct: 200 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 259
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M + GL PN TY +L+ Y E S EM +KG+ SV+ YN L
Sbjct: 260 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 319
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G EA ++ ++M+ + PD+ T++ +I S G A + NEML G
Sbjct: 320 VHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EP TSLI + R + ++ + G++PD
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 417
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I P+A ++ LI Y GN +++ EM + G++P +TY +L+ + R R
Sbjct: 341 KKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 400
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +++++ D G+SP+ + +++ + E + +EM K + +NTL+
Sbjct: 401 EADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 460
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +EA + ++MK +PD +++++I+ RG + +A + +EML GF
Sbjct: 461 QGRCREGKVEEARMLLDEMK-XRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGF 519
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P L +LI+C K Q D L + GI+PDD
Sbjct: 520 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 558
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 113/213 (53%), Gaps = 14/213 (6%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPW 160
I+P++++ +LI G + ++++M IG+ PN +TYN L+D G +R +
Sbjct: 239 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 298
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRA-YGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ EM G+ P+ +TY L+ A + R GE + +EM++KG+ YN L
Sbjct: 299 SYR---DEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD-DMIKEMRKKGIIPDAITYNIL 354
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G AF++ +M S+ +P T++S+I + S R ++ EA+ +F ++L+ G
Sbjct: 355 INGYSRCGNAKRAFDLHNEML-SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413
Query: 280 FEPNLFVLTSLIQCY---GKAQRTDDVVRALNR 309
P++ + ++I + G +R +++ ++R
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR 446
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 7/230 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+++ R K I P+ ++ L+ G ++ +EM+ G+ P+ ITYN L
Sbjct: 295 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 354
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + ++ EM G+ P TY SL+ R ++ ++ ++ ++G+
Sbjct: 355 INGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 414
Query: 210 QLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSE 267
V ++N ++ CA+ G + AF + ++M ++ PD TF++++ CR GKV E
Sbjct: 415 SPDVIMFNAMIDGHCAN-GNVERAFMLLKEM-DRKSVPPDEVTFNTLMQ-GRCREGKVEE 471
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
A + +EM G +P+ +LI YG+ D + + +G P
Sbjct: 472 ARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNP 521
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I + GN + + +EM V P+ +T+N L+ R + + + +
Sbjct: 417 DVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 476
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ P+ +Y +L+ YGR +D V EM G ++ YN L+
Sbjct: 477 DEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKN 536
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
D A E+ ++M ++ PD T+ S+I
Sbjct: 537 QEGDLAEELLKEM-VNKGISPDDSTYLSLI 565
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TLI YG G+ V +EM +IG P ++TYN L+ + + + + +
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546
Query: 167 KEMTDNGLSPNWNTYASLLRAYG 189
KEM + G+SP+ +TY SL+ G
Sbjct: 547 KEMVNKGISPDDSTYLSLIEGMG 569
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 33/255 (12%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G PN +Y +++ Y E + M+ KG++ Y +L++ G +EA
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
+F+ M P++ T++++I +G + A + +EM++ G P++ L+
Sbjct: 263 SGLFDKMVEI-GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 321
Query: 293 CY---GKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ---------TPKEELGKL 340
G+ DD+++ + + GI PD L+N ++ E L K
Sbjct: 322 ALFMEGRMGEADDMIKEMRK---KGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI-----SKDVKKAYCNCLID-L 394
+E + + L YV+ + KEA +LF I S DV N +ID
Sbjct: 379 IEPTHVTYTSLIYVLS--------RRNRMKEADDLFEKILDQGVSPDV--IMFNAMIDGH 428
Query: 395 CVNLNLLENACKLLE 409
C N N +E A LL+
Sbjct: 429 CANGN-VERAFMLLK 442
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D ++ I G + L++ EM A V PN+I YN+ +++ +A + W++ ++
Sbjct: 102 DARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQ-WEIAVSL 160
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM GL+P+ +Y+S + A GR E+ L ++ +M+ G+ V Y + +A CA+
Sbjct: 161 VKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACAN 220
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA + + + P+ ++SS+IT C+ G+ A + EM PN+
Sbjct: 221 GGRWKEAVSLLRKIPTV-GLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNII 279
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ I K R + + L +P +G+ PD
Sbjct: 280 TYNAAIDACAKGGRWKEAIDLLREMPTVGLPPD 312
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
++ D + W ID ++ I G G ++ + + EM G P++ Y+ ++D
Sbjct: 18 RAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDA 77
Query: 153 MGRAKRPWQVKTIY-KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + W++ + EM G++P+ +Y + + A R + L + REM + +
Sbjct: 78 CAKGGQ-WKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTP 136
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+V +YN+ + CA G + A + ++M ++ PD ++SS I+ C G+ EA +
Sbjct: 137 NVIIYNSAINSCAKAGQWEIAVSLVKEM-ATVGLAPDVISYSSAISACGRGGRWEEALEL 195
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F +M +G P++ S I R + V L ++P +G+TP+
Sbjct: 196 FEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPN 242
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 1/210 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S+ I G G ++ L ++E+M+ GV P++ITY + + R + ++
Sbjct: 172 DVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLL 231
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+++ GL+PN +Y+S++ A + + L + REMK + ++ YN + CA
Sbjct: 232 RKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKG 291
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++ +M + PD ++SS+I CS + EA + EM G PN
Sbjct: 292 GRWKEAIDLLREMPTV-GLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAIS 350
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
S I K + + L +P G+T
Sbjct: 351 YNSAIDACAKGGQWKEAKGLLREMPTAGVT 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 3/216 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R+ PN ++ I G + +++ EM +G+ P++++Y++++D + R +
Sbjct: 273 RLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEA 332
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I +EM GLSPN +Y S + A + ++ + REM G+ V YN+ +A
Sbjct: 333 IDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAA 392
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
CA EA + +M + +++SS I C +A+ + EM G P
Sbjct: 393 CAKGEQWKEALALLREMPTV-GLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAP 451
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N S I G+ + ++ V L +P +G++PD
Sbjct: 452 NEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPD 487
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L + EM +G+ + +Y++ +D G+ + K + +EM GL+PN Y S + A
Sbjct: 403 LALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDA 462
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
GR E+ + + REM G+ V Y++ +A CA EA + ++M S+ P
Sbjct: 463 CGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEM-SAAGLAP 521
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D ++S I CS G+ A A+ EM AG PN+ +S I + + + + L
Sbjct: 522 DLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALL 581
Query: 308 NRLPELGITPD 318
+ G+ PD
Sbjct: 582 EEMRGSGVVPD 592
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++S+ I G + + EM +G+ PN + YN+ +D GR + + + +EM
Sbjct: 420 SYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREM 479
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
GLSP+ +Y+S + A + ++ L+V +EM G+ + YN+ + C+ G
Sbjct: 480 PTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRW 539
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A + +M+++ P+ ++SS I C G+ E A+ EM +G P++ +
Sbjct: 540 KMAVALLGEMRAA-GLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHA 598
Query: 290 LI 291
L+
Sbjct: 599 LM 600
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S+ I + L V +EM A G+ P++I YN+ +D + R +
Sbjct: 487 DVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALL 546
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
EM GL+PN +Y+S + A R ++ +++ EM+ G+ V Y+ L+ CA
Sbjct: 547 GEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHALMVTCA 604
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 40/97 (41%)
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A + MK D ++ IT C G+ +A + EM G P+L +++
Sbjct: 15 KALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAV 74
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
I K + V L +P GI PD R G +N
Sbjct: 75 IDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAIN 111
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 23/295 (7%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
FS +I + +G D L V+E M A VKPN++ Y+ ++D R+ R + + +++EM
Sbjct: 338 VFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEM 397
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
D PN TY+S++R Y LS + EM + G + Y+ L++ DVG
Sbjct: 398 VDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRL 457
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNLFVLT 288
+A ++++M C PD+ ++SM+ G V +FN+ML G +P++
Sbjct: 458 KDAMMVWKNMI-GRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDVISYN 516
Query: 289 SLIQCYGKAQRTDDVVRA---LNRLPELGITPDDRFCGCLL---NVMTQTPKEELGKLVE 342
L+ RT+D+ RA LN++ + PD C L V+ +E L LV
Sbjct: 517 VLLDAL---IRTNDLPRAMDLLNQMLDQMCDPDTITCNIFLREFGVLEGKGREFLEGLVM 573
Query: 343 --CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI-----SKDVKKAYCNC 390
C G VV ++L + + EA + + +K V+K NC
Sbjct: 574 RLCYRDRYRAAGDVVMVMLAKYIV-----PEAGIWYTIVRGVCQTKRVQKVVDNC 623
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ AF+ ++K AG+ +G + ++ M+ G +TYN LL + I
Sbjct: 229 VSAEAFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNI 288
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M + G+ P TY +++ + ED V +EM +G+ S +++ ++
Sbjct: 289 MRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCK 348
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A ++E M ++ +P+ +S+MI + G+++EAE +F EM++A PN+
Sbjct: 349 SGEVDRALMVWETMVAAR-VKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIV 407
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+S+++ Y + + + ++G P
Sbjct: 408 TYSSMVRGYFHIANSSRALSTWEEMIKVGCVP 439
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 4/201 (1%)
Query: 104 WRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
W + P+ F ST++ AG + + + EM GV + +N +L M RA
Sbjct: 191 WNLVPDKFTYSTVVSALADAGCVEEAVALVHEMVVDGVV-SAEAFNPVLKAMLRAGDVNG 249
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+++ M G + TY LL +++ R M+ +G+ + Y ++
Sbjct: 250 AVKLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVD 309
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G ++A+++ ++M + P + FS++IT G+V A ++ M+ A +
Sbjct: 310 GLVKCGRVEDAWKVAQEM-GGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVK 368
Query: 282 PNLFVLTSLIQCYGKAQRTDD 302
PN+ + +++I + ++ R +
Sbjct: 369 PNVVLYSAMIDGFARSGRMTE 389
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTI 165
D A+++++K +G DG L ++ +M A G KP++I+YN LLD + R + +
Sbjct: 475 DTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDL 534
Query: 166 YKEMTDNGLSPNWNTYASLLRAYG 189
+M D P+ T LR +G
Sbjct: 535 LNQMLDQMCDPDTITCNIFLREFG 558
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 184 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 243
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 244 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 303
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 304 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 358
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
N+ V +I K ++ +VV +++ LG PD +LN
Sbjct: 359 VKNIAVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLN 405
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 119 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 238
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 239 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 297
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 298 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 331
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 15 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIF 74
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 75 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN 134
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 135 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 193
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 194 YNTLLRVYGDAE 205
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 50 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 109
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 110 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 169
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 170 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 228
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 229 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 288
Query: 312 ELGITPD 318
G+ D
Sbjct: 289 SSGVEID 295
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 62
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 63 KLCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 121
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 122 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 168
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G N+ + ++ +
Sbjct: 313 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKNIAVFERMIHLL 372
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E G S
Sbjct: 373 SKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 432
Query: 214 TLYNTLLA 221
++ +L+
Sbjct: 433 EVHFQMLS 440
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 113/209 (54%), Gaps = 3/209 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y G+ +G +++++MK+ ++P+ ITYN L++ +G+ +R + + EM
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT 229
NG++P+ T+ +L+ AYGRA E + +M+EKG++ +V Y +++ A C + G
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKN-GKI 484
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA I +DM ++ P + ++++I G +A + +M +G P++
Sbjct: 485 LEAVAILDDM-FIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNL 543
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI+ K + + L+ L G+ PD
Sbjct: 544 LIKGLCKQSQISEAEELLDSLRNYGLAPD 572
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 43/276 (15%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++T+I + G+ + ++ +M G+KPN+ITYN LL + RA R +
Sbjct: 219 VVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETA 278
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL------------ 211
+ EM + P+ TY+ L + R + LS++ E +KG+++
Sbjct: 279 AVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGL 338
Query: 212 -----------------------SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ +YNTL+ +G + AF IF+ MK S +PD
Sbjct: 339 CKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMK-SRLIRPD 397
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T++++I +++EA + EM + G P++ +LI YG+A + + L+
Sbjct: 398 HITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILS 457
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ E G+ P+ G ++N + GK++E V
Sbjct: 458 DMQEKGLKPNVVSYGSIVNAFCKN-----GKILEAV 488
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++ LI G ++ EM+ GV P++ T+N L+D GRA + +
Sbjct: 395 RPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFI 454
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I +M + GL PN +Y S++ A+ + + +++ +M K + +YN ++
Sbjct: 455 ILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYI 514
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G TD+AF + E MKSS P T++ +I + ++SEAE + + + G P++
Sbjct: 515 ECGSTDQAFMLAEKMKSS-GVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDV 573
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+LI TD + + + GI P R
Sbjct: 574 ISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPR 609
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 38/264 (14%)
Query: 93 KSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
+++D EK ++P+ F+TLI YG AG + C + +M+ G+KPN+++Y +++
Sbjct: 416 EAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIV 475
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ + + + I +M + P Y +++ AY + + +MK G+
Sbjct: 476 NAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVP 535
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-------- 262
S+ YN L+ EA E+ + +++ PD +++++I+ C R
Sbjct: 536 PSIVTYNLLIKGLCKQSQISEAEELLDSLRNY-GLAPDVISYNTLISACCYRSNTDRALE 594
Query: 263 ---------------------------GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
G+V E E ++ +ML+ P + ++ Y
Sbjct: 595 LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYA 654
Query: 296 KAQRTDDVVRALNRLPELGITPDD 319
K V + + GI D
Sbjct: 655 KCGEESKVEALRKEMSDKGIAVGD 678
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%), Gaps = 7/209 (3%)
Query: 105 RIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGV-KPNMITYNNLLDTMGRAKRPWQ 161
R P+ F+ ++ AG+ D + + M G PN +YN ++ + +A
Sbjct: 147 RARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCD 206
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ EM + + PN TY +++ + + E ++ +M G++ +V YN LL+
Sbjct: 207 AVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLS 266
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G E + ++M +S PD +T+S + S G ++F E ++ G +
Sbjct: 267 GLCRAGRMGETAAVLDEM-ASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVK 325
Query: 282 PNLFVLTSLIQCY---GKAQRTDDVVRAL 307
+ + L+ GK + ++V++ L
Sbjct: 326 IGAYTCSILLNGLCKDGKISKAEEVLQTL 354
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 86 RASKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RA ++ E + D A + K D +S L + G+ L+++EE GVK
Sbjct: 270 RAGRMGETAAVLDEMA-SRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
T + LL+ + + + + + + + + ++GL Y +L+ Y + E S++++
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
MK + ++ YN L+ V EA ++ +M+ + P TF+++I G
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKN-GVNPSVETFNTLIDAYGRAG 447
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
++ + + ++M E G +PN+ S++ + K + + V L+ +
Sbjct: 448 QLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDM 494
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
++ +I Y G+ D + E+MK+ GV P+++TYN L+ + + + + + +
Sbjct: 504 QVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDS 563
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ + GL+P+ +Y +L+ A + L + +EM + G++ S Y L + G
Sbjct: 564 LRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGR 623
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
E +++ M ++ P S ++ M+ + G+ S+ EA+ EM + G + T
Sbjct: 624 VHEMENLYQQML-DKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDY--T 680
Query: 289 SLIQC 293
S+ C
Sbjct: 681 SMTNC 685
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 9/193 (4%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+N + C G DEA + M P++++++ +I G +A +F+EM
Sbjct: 155 WNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEM 214
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK- 334
E PN ++I + K + R +++ G+ P+ LL+ + + +
Sbjct: 215 PEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRM 274
Query: 335 -EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID 393
E L E + G+ +L + GD + + S+ K VK C I
Sbjct: 275 GETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSI- 333
Query: 394 LCVNLNLLENACK 406
LL CK
Sbjct: 334 ------LLNGLCK 340
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 16/261 (6%)
Query: 96 DTRARNEKWRI---------DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
D + WR+ +PN ++ LI +G + ++ M GV PN +
Sbjct: 332 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 391
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TYN L++ + +R + M NG SPN TY +++ Y + + V M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++G ++ YNT++ D G T A I + M+ C+PD W+++ +I K
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG-GCKPDEWSYTELICGFCKISK 510
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ A +FNEM++ G PN T+LI Y K ++ D L + G P+ +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 325 LLNVMTQ----TPKEELGKLV 341
L++ +T+ + EEL K++
Sbjct: 571 LIHGLTKQNNFSGAEELCKVM 591
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+IK Y +GN L + + M+ G KP+ +Y L+ + + ++ EM
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D+GL PN TY +L+ Y + + S+ MK G + +V YN L+
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ + M E P+ T+++MI G S A MFN+M+E G PNL +SL
Sbjct: 583 GAEELCKVM-IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
I+ G+ + ++ L G+ PD+
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDE 670
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+ A+S L+ G ++ Y M + GV+PN++ YN +++ + + +T
Sbjct: 177 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 236
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I K++ ++ +SP+ TY S++ + R + L V+ +M ++G + + Y+TL+
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 296
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D G +EAF++ +M P + T + I G +A +F +M G EPN+
Sbjct: 297 DSGRVNEAFDLIREM-ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ T+LI + + +R+ G+ P+ L+N++ + + + +V +
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 345 EKSNSKLGYVVKL--LLEEQDIEGDFKKEATELFNSISKD----------VKKAYCN 389
N +V +++ I GD KK + N + + + K YC+
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D +++ LI + + ++ EM G+ PN +TY L+D + ++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ + M +G PN TY L+ + + + M E+G+ +V Y +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G T A E+F M + C P+ T+SS+I GKV EAE +F E+ G
Sbjct: 607 IDGLCKNGSTSLALEMFNKM-IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P+ +I+ Y + + + L R+ + G P
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + ++ LI NF G + + M G+ PN++TY ++D + +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M + G PN TY+SL+RA G+ E+ +++ E++ G+ Y ++
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G + AF M + CQP WT+ +I
Sbjct: 682 MSGKVEHAFNFLGRMIKA-GCQPTLWTYGVLI 712
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 8/218 (3%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVG 227
++ +GL Y++LL R + Y M +G+Q ++ +YN ++ A+C D G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKD-G 229
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFV 286
+A I + + SE PD++T++SMI + CR + A +FN+M + G EPN
Sbjct: 230 NVADAETIMKKVFESEM-SPDTFTYTSMI-LGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC-GCLLNVMTQTPKEELGKL-VECV 344
++LI + R ++ + + GI P C G ++ + E+ +L V+
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
K Y L+ + G K A LF+ +S+D
Sbjct: 348 NKGCEPNVYTYTALISGLCVSG-LLKVAIGLFHRMSRD 384
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F +I G G + ++EEMK G+KP + +N LL R + ++I EM
Sbjct: 319 FVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEME 378
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+GLSP+ +TY L+ AY E + ++M+ + +Q + +++ +LA D G
Sbjct: 379 KSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQ 438
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ FE+ +MK+S N +PD ++ MI + A ++ ML G EP++ +L
Sbjct: 439 KTFEVLREMKNS-NVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTL 497
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
I C+ K D + E G P C N+M + E+
Sbjct: 498 IDCHRKHGYHDRAAELFEEMQERGYLP----CPTTYNIMINSLGEQ 539
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N + D + ++ +I +G D + Y+ M + G++P+++T+N L+D +
Sbjct: 448 KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYH 507
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++EM + G P TY ++ + G ++ + +M+ +G+ +V Y TL
Sbjct: 508 DRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTL 567
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G ++A + E MKS+ +P + ++++I + RG +A + M+ G
Sbjct: 568 VDIYGHSGRFNDAIDCLEAMKSA-GLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDG 626
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
P+L L SLI +G+ +R + L + E + PD L+ + + K
Sbjct: 627 LRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDK 681
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 2/228 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
++YD R +E D ++TLI + G D ++EEM+ G P TYN ++++
Sbjct: 477 ETYD-RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINS 535
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+G ++ +VK + +M GL PN TY +L+ YG + D + MK G++ S
Sbjct: 536 LGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPS 595
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
T+YN L+ A G +++A + M S+ +P +S+I + EA ++
Sbjct: 596 ATMYNALINAFAQRGLSEQAVNAYRVM-ISDGLRPSLLALNSLINAFGEDRRDIEAFSIL 654
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
M E +P++ T+L++ + + D V + G TPD +
Sbjct: 655 QYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGK 702
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
++K +D + +I + AG+ + L ++A G+ P T+ ++ +G R
Sbjct: 274 SDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTE 333
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + I++EM + GL P + +LL+ Y R ++ S+ EM++ G+ Y L+
Sbjct: 334 EAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLV 393
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
A+VG + A + + M+ + N QP+++ FS ++ RG+ + + EM +
Sbjct: 394 DAYANVGRWESARHLLKQME-ARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNV 452
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P+ +I +GK D + +R+ GI PD
Sbjct: 453 KPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPD 490
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 129/285 (45%), Gaps = 11/285 (3%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL--SVY 201
+TYN L+ R + + M +G ++ Y+ ++++ R + L +Y
Sbjct: 210 LTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLY 269
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
E++ ++L L N ++ A G + A F M + P + TF ++I+
Sbjct: 270 EEIESDKIELDGLLLNDIILGFAKAGDPNRAL-YFLSMVQASGLNPKTSTFVAVISALGN 328
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ EAEA+F EM E G +P + +L++ Y + + ++ + + G++PD+
Sbjct: 329 HGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHT 388
Query: 322 CGCLLNVMTQTPKEELGK-LVECVEKSNSKLG-YVVKLLLEEQDIEGDFKKEATELFNSI 379
G L++ + E + L++ +E N + ++ +L G+++K L
Sbjct: 389 YGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMK 448
Query: 380 SKDVK--KAYCNCLIDLCVNLNLLENAC----KLLELGLTLEVYT 418
+ +VK + + N +ID N L++A ++L G+ +V T
Sbjct: 449 NSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVT 493
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 118/279 (42%), Gaps = 46/279 (16%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
EK Y+ ++K + P ++ LI + + LN+ M+ G + + I Y+ ++
Sbjct: 193 EKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQ 252
Query: 152 TMGRAKR---PWQVKTIYKEMTDN-----------------------------------G 173
++ R + P ++ +Y+E+ + G
Sbjct: 253 SLTRTNKIDIPL-LQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASG 311
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
L+P +T+ +++ A G E+ +++ EMKE G++ + +N LL A G EA
Sbjct: 312 LNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAE 371
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
I +M+ S PD T+ ++ + G+ A + +M +PN F+ + ++
Sbjct: 372 SIISEMEKS-GLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILAS 430
Query: 294 Y---GKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
Y G+ Q+T +V+R + + PD F +++
Sbjct: 431 YRDRGEWQKTFEVLREMK---NSNVKPDRHFYNVMIDTF 466
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A ++LI +G ++ + MK VKP+++TY L+ + R + +V +Y+EM
Sbjct: 633 ALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEM 692
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
+G +P+ A L A RY + TLS+
Sbjct: 693 ILSGCTPDGKARAMLRSAL---RYMKRTLSL 720
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
Query: 93 KSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K+ D EK +DP+ F+TLI YGTAG + C V +M+ G+K ++I++ +++
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 481
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ + + I +M ++PN Y S++ AY + E L + +MK G+
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVS 541
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
S+ YN LL DEA E+ +++ + +PD +++++I+ C +G +A
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRN-QGLRPDVVSYNTIISACCNKGDTDKALE 600
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ EM + G P L +L+ A R D+ ++ + P G +++
Sbjct: 601 LLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 657
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 45/278 (16%)
Query: 78 IWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMK 135
+W + K A K+ ++ D + PN ++T+I + G+ + + ++M
Sbjct: 204 LWRSGKGSDALKVFDEMVD-------MGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
G KPN++TYN LL + R R + + + EM + + P+ TY+ L R +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316
Query: 196 DTLSVYREMKEKGMQL-----------------------------------SVTLYNTLL 220
LS++ E +KG+ L + +YNTL+
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
V AF IFE MK S + +PD T++++I V++AE + EM ++G
Sbjct: 377 NGYCQVRDLRGAFCIFEQMK-SRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 435
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P++ +LI YG A + + L+ + + GI D
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y + G ++E+MK+ ++P+ ITYN L++ + + + + + + EM
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ T+ +L+ AYG A E +V +M++KG++ V + +++ G
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA I +DM ++ P++ ++S+I G +A + +M +G ++ L
Sbjct: 492 EAVAILDDM-IYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLL 550
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
++ ++ + D+ + L G+ PD
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPD 578
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 3/230 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKP-NMITYNNLLDTMGRAKRPWQV 162
R D A++ +++ AG+ D L + M ++ G P + +YN ++ + R+ +
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ EM D G++PN TY +++ + + E + +M G + +V YN LL+
Sbjct: 214 LKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSG 273
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G DE + ++M +S + PD +T+S + + G+ ++F E L+ G
Sbjct: 274 LCRTGRMDETRALMDEM-ASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVML 332
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ + L+ K + + L G+ P L+N Q
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQV 382
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN+ R D +++T+I G+ D L + +EM G++P + T + L+ + A R
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRV 630
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
++ +Y++M + P+ + Y ++ AY R S+ +EM EKG+ T
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 10/214 (4%)
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP-DSWTFSS 254
D + + + G + +N ++ C G D A + M SE P D+++++
Sbjct: 140 DVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNV 199
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I GK S+A +F+EM++ G PN ++I + K + R +++ G
Sbjct: 200 VIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259
Query: 315 ITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKL--GYVVKLLLEEQDIEGDFKKEA 372
P+ LL+ + +T + + + + S+S L G+ +L + G+ +
Sbjct: 260 PKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTML 319
Query: 373 TELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
+ S+ K V C I LL CK
Sbjct: 320 SLFAESLKKGVMLGAYTCSI-------LLNGLCK 346
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L VY+ M + G+KP+M TY+ L+ +GR ++ + +EM GL PN TY +RA
Sbjct: 220 LKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRA 279
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQ 246
GRAR +D +++EM ++G V Y L+ A+CA G D+A E++ M++S +
Sbjct: 280 LGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA-AGKLDKAKELYVKMRASSH-S 337
Query: 247 PDSWTFSSMITICSCRGKVSEAEAM---FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
PD T+ IT+ GKV + E + +NEM G+ P++ T LI+ K+ D
Sbjct: 338 PDRVTY---ITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRA 394
Query: 304 VRALNRLPELGITPD 318
L+ + GI P+
Sbjct: 395 FDMLDVMTTKGIFPN 409
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 125/254 (49%), Gaps = 12/254 (4%)
Query: 71 GSSPKSYIW-----VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGN 123
G+ P ++ + + KS R +KL + + R+R +PNA + +I + N
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRG----CEPNAITHNIIISALVKSNN 881
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+ L++Y E+ + P TY L+D + +A R Q I++EM D G PN Y
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ +G++ + ++++M ++G++ + Y L+ G DEA + FE++K +
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLT- 1000
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
PD+ +++ +I ++ EA ++F+EM G P+L+ +LI G A + D
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060
Query: 304 VRALNRLPELGITP 317
V+ L +G+ P
Sbjct: 1061 VKMYEELQLVGLEP 1074
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+ +G+ D ++ + M G+ PN+ TYN ++ + +A+R + +
Sbjct: 374 DVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELL 433
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M G+ P +Y + YG++ + + MK++G+ S+ N L A+
Sbjct: 434 ENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAET 493
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +IF D+ PDS T++ ++ S G++ +A + +EM+ G EP++ +
Sbjct: 494 GRISEAEDIFNDLHKC-GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMI 552
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ SLI KA R D + RL L + P
Sbjct: 553 INSLINTLYKAGRVDAAWKMFGRLKNLKLAP 583
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + P AFS I YG +G+ ++ +E MK G+ P++ N L T+ R
Sbjct: 437 ESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRI 496
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + I+ ++ GLSP+ TY L++ Y +A + + EM KG + V + N+L
Sbjct: 497 SEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSL 556
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G D A+++F +K+ + P T++ ++T GK+ +A +F M E+G
Sbjct: 557 INTLYKAGRVDAAWKMFGRLKNLK-LAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN SL+ C K D ++ R+ + PD
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPD 654
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L ++E+MK+ G PN TYN LLD G++KR ++ +Y EM G PN T+ ++ A
Sbjct: 816 LELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISA 875
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
++ L +Y E+ + Y L+ G +++A +IFE+M C P
Sbjct: 876 LVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY-GCGP 934
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+S ++ +I G++ A +F +M++ G P+L T L++C R D+ V+
Sbjct: 935 NSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYF 994
Query: 308 NRLPELGITPD 318
L G+ PD
Sbjct: 995 EELKLTGLDPD 1005
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E + +S L+ G G+ +N+ EEMK+IG++PN+ TY + +GRA+
Sbjct: 225 RMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRAR 284
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R I+KEM D G P+ TY L+ A A + +Y +M+ Y
Sbjct: 285 RIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYI 344
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TL+ VG + + +M+ + PD T++ +I G V A M + M
Sbjct: 345 TLMDKFGKVGDLETVKRFWNEME-VDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTT 403
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G PNL ++I KA+R D+ + L + LG+ P
Sbjct: 404 KGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKP 443
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 3/234 (1%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
S EK+ + + PN F+ L+ +G + + ++Y EM++ G +PN I
Sbjct: 808 GSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAI 867
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T+N ++ + ++ + +Y E+ SP TY L+ +A E + ++ EM
Sbjct: 868 THNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM 927
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ G + +YN L+ G D A E+F+ M E +PD +++ ++ G+
Sbjct: 928 LDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM-VKEGIRPDLKSYTILVECLCITGR 986
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EA F E+ G +P+ +I GK++R D+ + + + GI+PD
Sbjct: 987 IDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPD 1040
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 135/318 (42%), Gaps = 51/318 (16%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI AG D +Y +M+A P+ +TY L+D G+ VK +
Sbjct: 304 DVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFW 363
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +G +P+ TY L+ A ++ + + M KG+ ++ YNT++
Sbjct: 364 NEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKA 423
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI--------------------------TICS 260
DEA E+ E+M+S +P ++++ I +I +
Sbjct: 424 RRLDEALELLENMESL-GVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAA 482
Query: 261 CR---------GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
C G++SEAE +FN++ + G P+ L++CY KA + D + L+ +
Sbjct: 483 CNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI 542
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEE-----LGKLVECVEKSNSKLGYVV---KLLLEEQD 363
G PD L+N + + + + G+L N KL V +LL
Sbjct: 543 SKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL------KNLKLAPTVVTYNILLTGLG 596
Query: 364 IEGDFKKEATELFNSISK 381
EG K A ELF S+++
Sbjct: 597 KEGKILK-ALELFGSMTE 613
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E R D +++ L++ G D + +EE+K G+ P+ ++YN +++ +G+++R +
Sbjct: 965 EGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDE 1024
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+++ EM + G+SP+ TY +L+ G A + + +Y E++ G++ SV YN L+
Sbjct: 1025 ALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIR 1084
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ G D+AF +F+ M C P++ TF+ +
Sbjct: 1085 GHSLSGNKDQAFSVFKKMMVV-GCSPNTETFAQL 1117
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 110/217 (50%), Gaps = 10/217 (4%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
+S +A K+ E+ D + PN+ ++ LI +G +G D ++++M G++
Sbjct: 916 RSEQAMKIFEEMLD-------YGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIR 968
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++ +Y L++ + R + ++E+ GL P+ +Y ++ G++R ++ LS+
Sbjct: 969 PDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSL 1028
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ EMK +G+ + YN L+ G D A +++E+++ +P +T++++I S
Sbjct: 1029 FSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLV-GLEPSVFTYNALIRGHS 1087
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
G +A ++F +M+ G PN L Y +A
Sbjct: 1088 LSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRA 1124
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
Query: 129 NVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
NV+++ K +G+ P + +YN L+D + + + ++++M G PN TY LL A
Sbjct: 781 NVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDA 840
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+G+++ +Y EM+ +G + + +N +++ ++A +++ ++ S + P
Sbjct: 841 HGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGD-FSP 899
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
T+ +I G+ +A +F EML+ G PN + LI +GK+ D
Sbjct: 900 TPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELF 959
Query: 308 NRLPELGITPD 318
++ + GI PD
Sbjct: 960 KKMVKEGIRPD 970
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 9/257 (3%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
++++D I PN ++T+I A D L + E M+++GVKP +Y
Sbjct: 392 DRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLF 451
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNW---NTYASLLRAYGRARYGEDTLSVYREMKE 206
+D G++ P + ++ M G+ P+ N L GR ED ++ ++ +
Sbjct: 452 IDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAED---IFNDLHK 508
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ YN L+ + G D+A ++ +M S+ C+PD +S+I G+V
Sbjct: 509 CGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEM-ISKGCEPDVMIINSLINTLYKAGRVD 567
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
A MF + P + L+ GK + + + E G P+ LL
Sbjct: 568 AAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLL 627
Query: 327 NVMTQTPKEELGKLVEC 343
+ +++ +L + C
Sbjct: 628 DCLSKNDAVDLALKMFC 644
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 3/229 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++LI AG D ++ +K + + P ++TYN LL +G+ + + ++
Sbjct: 549 DVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELF 608
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
MT++G PN T+ SLL + + L ++ M V YNT++
Sbjct: 609 GSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIRE 668
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLF 285
G D AF F MK + PD T ++I G+V +A + E + +A + N
Sbjct: 669 GRIDYAFWFFHQMK--KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQ 726
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L++C ++ + L + DD L+ V+ + K
Sbjct: 727 FWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKK 775
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
L+ + + K+ + ++ + T N G+ P +Y L+ + + E L ++ +MK
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G + YN LL ++ ++++ +M+S C+P++ T + +I+ +++
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRS-RGCEPNAITHNIIISALVKSNNLNK 884
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
A ++ E++ F P LI KA R++ ++ + + G P+ L+N
Sbjct: 885 ALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILIN 944
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 102/270 (37%), Gaps = 63/270 (23%)
Query: 107 DPNAFSTLIKLYGTAGNF----DGC----------------LNVYEEMKAIGVKPNMITY 146
DPN+ + K+ NF D C + V++ M+ + N+ TY
Sbjct: 110 DPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTY 169
Query: 147 NNLLDTM----GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+ + G + P+ ++ +MT+ G N +Y L+ + + L VY+
Sbjct: 170 MTIFKALSIKGGIGRAPFALR----KMTEVGFILNAYSYNGLIHLL-LPGFCNEALKVYK 224
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS--------------------- 241
M +GM+ S+ Y+ L+ G T + + E+MKS
Sbjct: 225 RMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRAR 284
Query: 242 -------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
E C PD T++ +I GK+ +A+ ++ +M + P+
Sbjct: 285 RIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYI 344
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ +GK + V R N + G PD
Sbjct: 345 TLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 6/233 (2%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +N K ++ L+ G G L ++ M G PN IT+N+LLD + +
Sbjct: 575 RLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKND 634
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYREMKEKGMQLSVTL 215
++ MT +P+ TY +++ YG R G + + +MK+ VTL
Sbjct: 635 AVDLALKMFCRMTMMNCNPDVLTYNTII--YGLIREGRIDYAFWFFHQMKKFLSPDYVTL 692
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
TL+ G ++A ++ + Q +S + ++ ++ EA + +
Sbjct: 693 -CTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEIL 751
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE-LGITPDDRFCGCLLN 327
+ + V+ LI+ K ++ D ++ + LGI P CL++
Sbjct: 752 VCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMD 804
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 123/243 (50%), Gaps = 2/243 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++ + +S L+K +G+ +V+ M + K + + ++L+ + A++ +
Sbjct: 109 HLNRSVYSYLVKALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAID 168
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ M + G++ + Y + A G+ + S+Y +MK G+ V YN +++
Sbjct: 169 LLHMMPEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFG 228
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
VG D+A E+FE+M S +C+PD T++SMI G + EA +F +M E G++P++
Sbjct: 229 RVGLVDKASELFEEMDDS-SCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDV 287
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVEC 343
F + LI+C+GK+ + D + + G P+ LL+ + + K E KL E
Sbjct: 288 FTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGKTREAHKLYET 347
Query: 344 VEK 346
+++
Sbjct: 348 LKQ 350
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +AF ++++ A +++ M G+ ++ YN + +G+ K+ + ++Y
Sbjct: 146 DRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFMSSLY 205
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M NG++P+ TY ++ ++GR + ++ EM + + V YN+++
Sbjct: 206 DKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKN 265
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA +F+DM+ + PD +T+S +I KV A ++F+EM+ G PN+
Sbjct: 266 GDLDEAHMLFKDMQ-EKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVT 324
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C + +T + + L + G+ PD
Sbjct: 325 YNILLDCLERHGKTREAHKLYETLKQQGLAPD 356
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++Y++MKA GV P++ TYN ++ + GR + +++EM D+ P+ TY S++
Sbjct: 203 SLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCL 262
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ ++ ++++M+EKG V Y+ L+ D A +F++M ++ C P+
Sbjct: 263 GKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM-IAQGCVPN 321
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
T++ ++ GK EA ++ + + G P+ + L + ++QRT
Sbjct: 322 IVTYNILLDCLERHGKTREAHKLYETLKQQGLAPDSITYSILERLESRSQRT 373
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ F+ +I +G G D ++EEM KP++ITYN++++ +G+ +
Sbjct: 213 VAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAH 272
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++K+M + G P+ TY+ L+ +G++ + S++ EM +G ++ YN LL
Sbjct: 273 MLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCL 332
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
G T EA +++E +K + PDS T+S
Sbjct: 333 ERHGKTREAHKLYETLK-QQGLAPDSITYS 361
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 107 DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+A++ LI++ G AG ++ EEM + G N+I YN +++ +G+ K +
Sbjct: 7 DPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAIF 66
Query: 165 IYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +M ++ PN TY+ +L G+ + L + L+ ++Y+ L+
Sbjct: 67 MLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSG------HLNRSVYSYLVK 120
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G+ EA +F M SS + D F SM+ K +EA + + M E G
Sbjct: 121 ALCKSGHASEAHSVFCRMWSSHE-KGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGIT 179
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + + GK ++ + +++ G+ PD
Sbjct: 180 TDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPD 216
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 4/185 (2%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK P+ TY L+ G+A + + + +EM G N Y +++ A G+ +
Sbjct: 1 MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKM 60
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ + + +M E Q + Y+ +L + A G EI + N +S
Sbjct: 61 VDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHLN----RSVYS 116
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++ G SEA ++F M + + + S+++ A++T + + L+ +PE
Sbjct: 117 YLVKALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEK 176
Query: 314 GITPD 318
GIT D
Sbjct: 177 GITTD 181
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
NC PD++T++ +I + GK ++ + EM+ G NL ++I+ GK + D
Sbjct: 5 NCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKA 64
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQD 363
+ L+++ E P+ +L+V+ +L +L E ++ + L V L +
Sbjct: 65 IFMLSKMIESDCQPNQFTYSIMLDVLATGG--QLHRLNEILDICSGHLNRSVYSYLVKAL 122
Query: 364 IEGDFKKEATELF----NSISKDVKKAYCNCLIDLCVNLNLLENACKLLEL----GLTLE 415
+ EA +F +S K + A+ + L LC N A LL + G+T +
Sbjct: 123 CKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALC-NAEKTAEAIDLLHMMPEKGITTD 181
Query: 416 V 416
V
Sbjct: 182 V 182
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 15/308 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN +S L++ Y AG ++ V+EEM G++P+++ Y L+D++ R + +
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKAT 238
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +M + GL PN TY L+ + + ++ +S+ M EKG+ L YNTL+
Sbjct: 239 QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298
Query: 224 ADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ V DEA + E+M E +P+ TF+S+I G++ +A + + M E G
Sbjct: 299 SGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCAC 358
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN---VMTQTPKEELGK 339
NL LI + + + ++ + G+ PD L+N M Q + E
Sbjct: 359 NLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAE--S 416
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLN 399
L+ + + + V + L E ++A F+ + K NC +D+
Sbjct: 417 LLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-------NCKLDVVAYST 469
Query: 400 LLENACKL 407
++ AC+L
Sbjct: 470 MIHGACRL 477
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ L L G D L + M A +P ++Y L+ + +R Q + ++M
Sbjct: 83 TVLAALCRQGGCLDAALFLLRVM-AHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQA 141
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
+G+ P+ TY +L+R A + + + REM E G++ +V +Y+ LL G +
Sbjct: 142 SGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWEC 201
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
++FE+M S +PD ++ +I GKV +A + ++M+E G EPN+ LI
Sbjct: 202 VSKVFEEM-SGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLI 260
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
K + + N + E G+ D
Sbjct: 261 NSMCKEGSVKEAMSLRNNMLEKGVALD 287
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 5/213 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + TLI+ A + D + + EM G++PN++ Y+ LL +A R V
Sbjct: 145 RPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSK 204
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC 223
+++EM+ G+ P+ Y L+ + R + V +M E+G++ +V YN L+ +MC
Sbjct: 205 VFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMC 264
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML--EAGFE 281
+ G EA + +M + D+ T++++IT S ++ EA + EM+ E E
Sbjct: 265 KE-GSVKEAMSLRNNML-EKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVE 322
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
PN+ S+I K R + + + E G
Sbjct: 323 PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + R +++TL++ + + +M+A GV+P+++TY L+ + A
Sbjct: 103 RVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAA 162
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + +EM ++G+ PN Y+ LL+ Y +A E V+ EM +G++ V +Y
Sbjct: 163 DVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYT 222
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G +A ++ + M +P+ T++ +I G V EA ++ N MLE
Sbjct: 223 GLIDSLCREGKVKKATQVMDKMM-ERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLE 281
Query: 278 AGFEPNLFVLTSLI 291
G + +LI
Sbjct: 282 KGVALDAVTYNTLI 295
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 39/253 (15%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN F+++I G V + M G N++T+N L+ + R + +
Sbjct: 321 VEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAM 380
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM +GL P+ TY+ L+ + + + S+ +M+ G++ + Y LLA
Sbjct: 381 ELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAAL 440
Query: 224 ADVGYTDEAFEIFEDMKSSENCQ-----------------------------------PD 248
+ G ++A F++M +NC+ PD
Sbjct: 441 CEQGMMEQARNFFDEMH--KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPD 498
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
S T+S +I + + G + AE + +M +GF P++ V SLI+ YG T+ V+ +
Sbjct: 499 SVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIR 558
Query: 309 RLPELGITPDDRF 321
+ I D +
Sbjct: 559 EMTAKDIALDSKI 571
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 85 PRASKLKEKSYDTRARN------EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG 138
P + L E+ +ARN + ++D A+ST+I + + M G
Sbjct: 435 PLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P+ +TY+ L++ + + + K+MT +G P+ + SL++ YG E L
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVL 554
Query: 199 SVYREMKEKGMQLSVTLYNTL 219
+ REM K + L + +T+
Sbjct: 555 ELIREMTAKDIALDSKIISTI 575
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 16/261 (6%)
Query: 96 DTRARNEKWRI---------DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
D + WR+ +PN ++ LI +G + ++ M GV PN +
Sbjct: 332 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTV 391
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TYN L++ + +R + M NG SPN TY +++ Y + + V M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++G ++ YNT++ D G T A I + M+ C+PD W+++ +I K
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG-GCKPDEWSYTELICGFCKISK 510
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ A +FNEM++ G PN T+LI Y K ++ D L + G P+ +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 325 LLNVMTQ----TPKEELGKLV 341
L++ +T+ + EEL K++
Sbjct: 571 LIHGLTKQNNFSGAEELCKVM 591
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+IK Y +GN L + + M+ G KP+ +Y L+ + + ++ EM
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D+GL PN TY +L+ Y + + S+ MK G + +V YN L+
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ + M E P+ T+++MI G S A MFN+M+E G PNL +SL
Sbjct: 583 GAEELCKVM-IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
I+ G+ + ++ L G+ PD+
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDE 670
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+ A+S L+ G ++ Y M + GV+PN++ YN +++ + + +T
Sbjct: 177 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 236
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I K++ ++ +SP+ TY S++ + R + L V+ +M ++G + + Y+TL+
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 296
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D G +EAF++ +M P + T + I G +A +F +M G EPN+
Sbjct: 297 DSGRVNEAFDLIREM-ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ T+LI + + +R+ G+ P+ L+N++ + + + +V +
Sbjct: 356 YTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 345 EKSNSKLGYVVKL--LLEEQDIEGDFKKEATELFNSISKD----------VKKAYCN 389
N +V +++ I GD KK + N + + + K YC+
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D +++ LI + + ++ EM G+ PN +TY L+D + ++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ + M +G PN TY L+ + + + M E+G+ +V Y +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G T A E+F M + C P+ T+SS+I GKV EAE +F E+ G
Sbjct: 607 IDGLCKNGSTSLALEMFNKM-IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P+ +I+ Y + + + L R+ + G P
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + ++ LI NF G + + M G+ PN++TY ++D + +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M + G PN TY+SL+RA G+ E+ +++ E++ G+ Y ++
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G + AF M + CQP WT+ +I
Sbjct: 682 MSGKVEHAFNFLGRMIKA-GCQPTLWTYGVLI 712
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 8/218 (3%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVG 227
++ +GL Y++LL R + Y M +G+Q ++ +YN ++ A+C D G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKD-G 229
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFV 286
+A I + + SE PD++T++SMI + CR + A +FN+M + G EPN
Sbjct: 230 NVADAETIMKKVFESE-MSPDTFTYTSMI-LGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC-GCLLNVMTQTPKEELGKL-VECV 344
++LI + R ++ + + GI P C G ++ + E+ +L V+
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
K Y L+ + G K A LF+ +S+D
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGILKV-AIGLFHRMSRD 384
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ +G L + E M G+ P++IT+N++LD + + +R ++K
Sbjct: 476 YNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 535
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G PN TY++L+ + ++ L + +M E G + + Y+T++ VG +
Sbjct: 536 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 595
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A + M+ + C PD+ T++++I R ++ EA + EMLEAGF P++ T+L
Sbjct: 596 DAVVVLRQMRDA-GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 654
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
++ R D+ V L+ + G P+
Sbjct: 655 CHGLCRSGRFDEAVEILDYMAARGCAPN 682
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 4/274 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA R + +STLI D L + +M +G + N +TY+ ++D + +
Sbjct: 533 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 592
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + ++M D G P+ TY +L+ + + + + + + REM E G SV Y
Sbjct: 593 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 652
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML- 276
TL G DEA EI + M ++ C P++ T+SS++ G+V+EA F +M
Sbjct: 653 TLCHGLCRSGRFDEAVEILDYM-AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ P++ ++LI KA R D+ L R+ G PD L+N + + +
Sbjct: 712 DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 771
Query: 337 LGKLVEC--VEKSNSKLGYVVKLLLEEQDIEGDF 368
G + C E+ Y ++ ++G+F
Sbjct: 772 TGLELFCGMAERGCKADIYAYNAMINAYCLKGEF 805
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 117/288 (40%), Gaps = 15/288 (5%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + +ST++ G + + V +M+ G P+ +TYN L+D + +R +
Sbjct: 575 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 634
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +EM + G P+ TY +L R+ ++ + + M +G + Y++++
Sbjct: 635 LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 694
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA FE M E P +S++I G++ EA M+ AG P++
Sbjct: 695 KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDV 754
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--------EE 336
+ LI A R D + + E G D ++N + EE
Sbjct: 755 VTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVK 384
+ + K+ G V+K L I+ EA F+SI +D +
Sbjct: 815 MK--THGIAKNTVTHGIVIKALCGNDRID-----EAVSYFHSIPEDCR 855
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
M+TYN L++ + +A R T +++ G P TY++++ R + +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
EM +G + YNTL+ G EAF + E M ++ C P+ TF +I
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERM-AANGCPPELITFGLIIKGLCKE 119
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G++ A + +EM++ GF P++ + T L+ + R D+ ++ +G TPD
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPD 175
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 7/211 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIYK 167
+ST+I D + EEM G PN +TYN L++ + GRAK + ++ +
Sbjct: 39 YSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAF---SLLE 95
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M NG P T+ +++ + E V EM ++G V ++ LL ++G
Sbjct: 96 RMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELG 155
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA+ F+ + PD+ T+++M+ G++ A + + E+ P +F
Sbjct: 156 RVDEAWFFFQQVLLI-GFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTF 214
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T + KA + +P+ G++P+
Sbjct: 215 TIAVDGLSKAGNLTGAYEFFDSMPQTGVSPN 245
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 108 PNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA-KRPWQVKT 164
P F+ I + G AGN G ++ M GV PN +TY+ L+D + +A K +
Sbjct: 209 PTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL 268
Query: 165 IYKEMTDNGL----------------------------SPNWNTYASLLRAYGRARYGED 196
+ + + G+ PN + SL+ +AR ++
Sbjct: 269 LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDE 328
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++ MKE G V YN LL + EA+ E M+ +E C P+ TFS++I
Sbjct: 329 AFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLI 388
Query: 257 TICSCRGKVSEAEAMFNEMLEA-GFEPNLFVLTSLIQCYGKA 297
G+V++A ++ M+ G PN F L++ KA
Sbjct: 389 QGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKA 430
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TLI + + L + M A G P+ Y ++D + +A P +
Sbjct: 856 DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM G SP+ TY ++ +A+ + EM K ++ +Y++L+
Sbjct: 916 QEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKA 975
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D+A+++ S +P +S+M+ ++C RG +A + EM EP +
Sbjct: 976 DKVDDAWKLLR----SSGIEPTITMYSTMVDSLCKNRG-TDKALEVIREMKSKNCEPGIH 1030
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRL 310
+ TSL Y R D+ V+ +N L
Sbjct: 1031 IWTSLATAYVAEGRVDEAVKLVNDL 1055
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 29/271 (10%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR-PWQVKT 164
PN F++L+ A D +++ MK G ++ITYN LL + + +R P +
Sbjct: 308 PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRH 367
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-KGMQLSVTLYNTLLAMC 223
+ G SPN T+++L++ A VY M +G+ + Y LL
Sbjct: 368 VELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGL 427
Query: 224 ADVGYTDEAFEIFEDMKSSE--------------------NCQPDSWTFSSMITICSCRG 263
G + + FE M E C+P T+++++T S G
Sbjct: 428 CKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSG 487
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
V +A + M+E+G P++ S++ K QR D R E G P+
Sbjct: 488 MVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYS 547
Query: 324 CLLNVMTQTPKEE-----LGKLVECVEKSNS 349
L++ +++ K + L K+VE ++N+
Sbjct: 548 TLIDGLSKMAKMDEALQLLAKMVELGCRANT 578
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I A + +EEM +KP+ I Y++L+D +A + V +
Sbjct: 926 DLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADK---VDDAW 982
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K + +G+ P Y++++ + + R + L V REMK K + + ++ +L
Sbjct: 983 KLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAE 1042
Query: 227 GYTDEAFEIFEDMK 240
G DEA ++ D++
Sbjct: 1043 GRVDEAVKLVNDLQ 1056
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 85/212 (40%), Gaps = 7/212 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + L+ G D ++++ IG P+ +TYN ++D + +A R +
Sbjct: 140 DVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVL 199
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + ++ SP T+ + +A + M + G+ + Y+ L+
Sbjct: 200 QLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKA 259
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A + D +N Q + FSS++ ++ EA + M PN+
Sbjct: 260 GKLDIALGLLRD----KNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVC 312
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ +A+R D+ + + E G + D
Sbjct: 313 FNSLMNGLCQARRVDEAFELFDVMKESGCSAD 344
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 5/227 (2%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
++ AR+E A+S LI AG D E M G P+++T++ L++ +
Sbjct: 706 FEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLC 765
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
A R ++ M + G + Y +++ AY ++ EMK G+ +
Sbjct: 766 DAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTV 825
Query: 215 LYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+ ++ A+C + DEA F + E+C+ D +++++IT + +A +
Sbjct: 826 THGIVIKALCGN-DRIDEAVSYFHSI--PEDCR-DEISYNTLITSLVASRRSEQALELLR 881
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
M+ G P+ +++ KA + + L + G +PD R
Sbjct: 882 AMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLR 928
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T++ AG + V + + P + T+ +D + +A +
Sbjct: 175 DAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFF 234
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+SPN TY +L+ +A + L + R+ K Q + +++LL
Sbjct: 235 DSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQA 291
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+EA ++ + M C P+ F+S++ +C R +V EA +F+ M E+G ++
Sbjct: 292 HRLEEAIQLLKAMP----CVPNVVCFNSLMNGLCQAR-RVDEAFELFDVMKESGCSADVI 346
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
L++ K +R + R + + R GC NV+T
Sbjct: 347 TYNILLKGLCKLRRIPEAYRHVELM--------RRTEGCSPNVVT 383
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 119/230 (51%), Gaps = 7/230 (3%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R K I+PN +++T++++YG A F ++++ M+ +K N++TYN ++ G+
Sbjct: 359 RMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTL 418
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + ++M G+ PN TY++++ +G+A + + ++++++ G ++ LY
Sbjct: 419 EHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQ 478
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
T++ G A + ++K QPD+ ++ ITI + G++ EA +F + +
Sbjct: 479 TMIVAYEKAGLVGHAKRLLHELK-----QPDNIPRTTAITILAKAGRIEEATWVFRQAFD 533
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
AG ++ V +I + + ++ +V+ ++ +G P+ +LN
Sbjct: 534 AGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLN 583
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 108/213 (50%), Gaps = 5/213 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ ++ F L+V EMK + ++ T N ++D G+ + ++
Sbjct: 298 DTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLF 357
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y ++LR YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 358 WRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKT 417
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + +DM+ +P++ T+S++I+I GK+ + +F ++ +G E + +
Sbjct: 418 LEHEKATNLVQDMQ-KRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVL 476
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y KA R L+ L + PD+
Sbjct: 477 YQTMIVAYEKAGLVGHAKRLLHELKQ----PDN 505
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 193 DRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIF 252
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G++P+ Y +++ +G+A+ + + +EM+ + Y+TLL M +
Sbjct: 253 SRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVEN 312
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA + +MK NC D T + MI + V EA+ +F M + G EPN+
Sbjct: 313 EKFLEALSVISEMKEV-NCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVS 371
Query: 287 LTSLIQCYGKAQ 298
++++ YG+A+
Sbjct: 372 YNTILRVYGEAE 383
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S LI+L ++ ++++ +K G+ P+++ YN +++ G+AK + + + KEM
Sbjct: 232 YSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMR 291
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ P+ +Y++LL + + LSV EMKE L +T N ++ + +
Sbjct: 292 AVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVK 351
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F M+ +P+ ++++++ + EA +F M + N+ ++
Sbjct: 352 EADRLFWRMRKI-GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTM 410
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I+ YGK + + + + GI P+
Sbjct: 411 IKIYGKTLEHEKATNLVQDMQKRGIEPN 438
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++ YN +L + RAK+ ++ EM L+ + TY++L+ +G+ + LS
Sbjct: 157 PSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSW 216
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
++M++ + + LY+ L+ + + +A IF +K S PD +++MI +
Sbjct: 217 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRS-GITPDIVAYNTMINVFG 275
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EA + EM P+ ++L+ + + ++ + + ++ + E+ D
Sbjct: 276 KAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLT 335
Query: 321 FCGCLLNVMTQ 331
C +++V Q
Sbjct: 336 TCNIMIDVYGQ 346
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+P+ Y +LR RA+ E ++ EM+++ + Y+TL+ G D A
Sbjct: 156 TPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALS 215
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+ M+ + D +S++I + S+A ++F+ + +G P++ ++I +
Sbjct: 216 WLQKMEQ-DRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVF 274
Query: 295 GKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
GKA+ + L + + + PD LLN+ + K
Sbjct: 275 GKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEK 314
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 48/211 (22%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+T I + AG + V+ + G ++ + ++D R K+ V ++++M +
Sbjct: 509 TTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRN 568
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
G PN + A +L AYG+ R + ++Y EM+E+G C +TDE
Sbjct: 569 VGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEG--------------CV---FTDE 611
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL------F 285
F+ M+++ R E++F E L++ +PN+
Sbjct: 612 VH--FQ-----------------MLSLYGARNDYKRLESLF-ERLDS--DPNINKKELHL 649
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
V+ S+ Y + R+ D R +NR+ ++ I+
Sbjct: 650 VVASI---YERGNRSKDASRIINRMNKIAIS 677
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 2/237 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +ST ++ + A +FD V+EEM+ N +TYN ++ + R+ +
Sbjct: 244 DVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 303
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM D GLSP+ TY +L+ + ++ ++ EM G++ +V +Y TL+
Sbjct: 304 EEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKE 363
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EAF+I +M S+ QP+ + ++I G++ A + NEM++ G P+ F
Sbjct: 364 GKAAEAFDILNEMISA-GVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
L+Q + + D LN + GI P+ G ++N + Q + +E G L+E
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 4/244 (1%)
Query: 78 IWVNPKSPRASKLKEKSY---DTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
I +P P +++ D R+ + L+ Y G+ V M
Sbjct: 142 ILAHPHPPLVLASIQRAIQDSDARSPSPSPSHSTAVLDVLVDTYKKNGSVRTAAQVVLMM 201
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+G+ P N LL + RA V + M G+ P+ TY++ L A+ +AR
Sbjct: 202 GDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDF 261
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ V+ EM+ + ++ YN +++ G +EAF E+M PD++T+ +
Sbjct: 262 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM-VDYGLSPDAFTYGA 320
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
++ G++ EA+A+ +EM +G +PN+ V +L+ + K + + LN + G
Sbjct: 321 LMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAG 380
Query: 315 ITPD 318
+ P+
Sbjct: 381 VQPN 384
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 119/248 (47%), Gaps = 9/248 (3%)
Query: 70 TGSSPKSYIW-VNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDG 126
+G P ++I+ + ++ S+ E ++ EK + P+ +S+LI + +
Sbjct: 624 SGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEK 683
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ + +EM G++P ++ YN L+D R+ + + ++ + GL PN TY +L+
Sbjct: 684 AVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALID 743
Query: 187 AYGRARYGE--DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
G + G+ D +Y++M ++G+ +YN L C+D ++A + E+M +
Sbjct: 744 --GNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY 801
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
FS+++ RG++ E E + + M++ PN + ++I +GKA + +
Sbjct: 802 AHVS--LFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAH 859
Query: 305 RALNRLPE 312
R L +
Sbjct: 860 RVFAELQQ 867
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 12/259 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
RASKL + R + + P L++ + + DG + EM+ G+ PN T
Sbjct: 403 RASKLLNEMIKVGHRPDTFTYHP-----LMQGHFQHYDKDGAFELLNEMRNSGILPNAYT 457
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV--YRE 203
Y +++ + + + + +EM GL PN YA L+ G ++ G +L+
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI--IGHSKEGHISLACESLEN 515
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCR 262
M + + + YN+L+ + VG +EA E + ++ PD +T+S +I C R
Sbjct: 516 MTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQK-RGLVPDEFTYSGLIHGYCKTR 574
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
+ +A+ + +ML +G +PN T L++ Y K+ + V L + G PD+
Sbjct: 575 -NLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633
Query: 323 GCLLNVMTQTPKEELGKLV 341
G ++ ++++ E+ +V
Sbjct: 634 GIVIRNLSRSENMEVAFMV 652
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ + A+ +K + P+ F S LI Y N + + ++M G+KPN TY +L
Sbjct: 542 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDL 601
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L+ ++ +V +I + M +G P+ + Y ++R R+ E V E+++ G+
Sbjct: 602 LEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 661
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +Y++L++ + ++A + ++M + E +P ++++I G +S A
Sbjct: 662 VPDLHIYSSLISGLCKMADMEKAVGLLDEM-AKEGLEPGIVCYNALIDGFCRSGDISRAR 720
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F+ +L G PN T+LI K D + + GI PD
Sbjct: 721 NVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPD 769
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 6/208 (2%)
Query: 103 KWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + P+ F ++LIK T G + Y +++ G+ P+ TY+ L+ + +
Sbjct: 518 KANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLE 577
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + ++M ++GL PN +TY LL Y ++ E S+ + M G + +Y ++
Sbjct: 578 KADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVI 637
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ + AF + +++ + PD +SS+I+ + +A + +EM + G
Sbjct: 638 RNLSRSENMEVAFMVLTEVEKN-GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGL 696
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALN 308
EP + +LI + R+ D+ RA N
Sbjct: 697 EPGIVCYNALIDGFC---RSGDISRARN 721
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PNAF + LI + G+ E M V P++ YN+L+ + R + +
Sbjct: 486 LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAE 545
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
Y ++ GL P+ TY+ L+ Y + R E + ++M G++ + Y LL
Sbjct: 546 EYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGY 605
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++ I + M S + +PD+ + +I S + A + E+ + G P+
Sbjct: 606 FKSNDHEKVSSILQSMLGSGD-KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPD 664
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
L + +SLI K + V L+ + + G+ P
Sbjct: 665 LHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEP 698
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 2/214 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I + +G + ++ +MK G KP T+N L+ G RP + +
Sbjct: 112 DSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLL 171
Query: 167 KEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +G + PN TY L++A+ E+ +V +M GMQ + YNTL A
Sbjct: 172 EMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQ 231
Query: 226 VGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G TD A + M+ N +P+ T +I G ++EA +M E G PN
Sbjct: 232 NGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNP 291
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V SLI+ Y TD V AL + E GI PD
Sbjct: 292 VVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPD 325
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 114/218 (52%), Gaps = 6/218 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
STLI+ G + ++ + G KP +ITY L+ + R KR + ++ ++
Sbjct: 50 MSTLIR----KGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVE 105
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+NG+ P+ + +++ A+ + + + ++R+MKE G + + + +NTL+ VG
Sbjct: 106 ENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPH 165
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA ++ E M N +P+ T++ +I + ++ EA + ++M+ +G +P++ +L
Sbjct: 166 EAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTL 225
Query: 291 IQCYGKAQRTDDVVRALNRLPELG--ITPDDRFCGCLL 326
+ + + TD+ R + ++ + + P++R CG ++
Sbjct: 226 ARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIII 263
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+I+ L+ T+ R +P + TI+ +T+ G P TY +L+ A R + S+
Sbjct: 43 VISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLS 102
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+++E G++ L+N ++ +D G EA +IF MK C+P + TF+++I
Sbjct: 103 KVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKEC-GCKPTTSTFNTLIKGFGIV 161
Query: 263 GKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ EA + M++ G +PN LIQ + ++ ++++ G+ PD
Sbjct: 162 GRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPD 218
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI+ + T + NV +M G++P+++TYN L + +
Sbjct: 180 VKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAE 239
Query: 164 TIYKEMT--DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +M +N + PN T ++R Y + + L +MKE G+ + ++N+L+
Sbjct: 240 RLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIK 299
Query: 222 MCADVGYTD---EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
D+ TD EA + E+ +PD T+S+++ S G + E +F++M++A
Sbjct: 300 GYLDITDTDGVEEALTLMEEF----GIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKA 355
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
EP++ + L + Y +A + D LN + + G+
Sbjct: 356 EIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGL 392
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N K + + +I+ Y GN L +MK +GV PN + +N+L+
Sbjct: 249 NNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTD 308
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
V+ M + G+ P+ TY++++ A+ + ++ ++ +M + ++ + Y+ L
Sbjct: 309 GVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILA 368
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G D+A + M + Q + F+++I+ GK+ A ++ +M E G
Sbjct: 369 KGYVRAGQPDKAEALLNSM-TKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGT 427
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
NL +LI YG+A++ L + E G+ P+
Sbjct: 428 PLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPE 465
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P F++LIK Y + DG M+ G+KP+++TY+ +++ + + I+
Sbjct: 290 NPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIF 349
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + P+ Y+ L + Y RA + ++ M + G+Q +V ++ T+++
Sbjct: 350 DDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAA 409
Query: 227 GYTDEAFEIFEDMKSSENCQP-DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D A ++E M +E P + T+ ++I + +AE + M E+G P +
Sbjct: 410 GKMDCALRLYEKM--NEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEM 466
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 16/261 (6%)
Query: 96 DTRARNEKWRI---------DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
D + WR+ +PN ++ LI +G + ++ M GV PN +
Sbjct: 332 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 391
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TYN L++ + +R + M NG SPN TY +++ Y + + V M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++G ++ YNT++ D G T A I + M+ C+PD W+++ +I K
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG-GCKPDEWSYTELICGFCKISK 510
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ A +FNEM++ G PN T+LI Y K ++ D L + G P+ +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 325 LLNVMTQ----TPKEELGKLV 341
L++ +T+ + EEL K++
Sbjct: 571 LIHGLTKQNNFSGAEELCKVM 591
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+IK Y +GN L + + M+ G KP+ +Y L+ + + ++ EM
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D+GL PN TY +L+ Y + + S+ MK G + +V YN L+
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ + M E P+ T+++MI G S A MFN+M+E G PNL +SL
Sbjct: 583 GAEELCKVM-IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
I+ G+ + ++ L G+ PD+
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDE 670
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+ A+S L+ G ++ Y M + GV+PN++ YN +++ + + +T
Sbjct: 177 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 236
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I K++ ++ +SP+ TY S++ + R + L V+ +M ++G + + Y+TL+
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 296
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D G +EAF++ +M P + T + I G +A +F +M G EPN+
Sbjct: 297 DSGRVNEAFDLIREM-ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 355
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ T+LI + + +R+ G+ P+ L+N++ + + + +V +
Sbjct: 356 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 415
Query: 345 EKSNSKLGYVVKL--LLEEQDIEGDFKKEATELFNSISKD----------VKKAYCN 389
N +V +++ I GD KK + N + + + K YC+
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 472
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D +++ LI + + ++ EM G+ PN +TY L+D + ++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ + M +G PN TY L+ + + + M E+G+ +V Y +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G T A E+F M + C P+ T+SS+I GKV EAE +F E+ G
Sbjct: 607 IDGLCKNGSTSLALEMFNKM-IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P+ +I+ Y + + + L R+ + G P
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + ++ LI NF G + + M G+ PN++TY ++D + +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M + G PN TY+SL+RA G+ E+ +++ E++ G+ Y ++
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G + AF M + CQP WT+ +I
Sbjct: 682 MSGKVEHAFNFLGRMIKA-GCQPTLWTYGVLI 712
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 8/218 (3%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVG 227
++ +GL Y++LL R + Y M +G+Q ++ +YN ++ A+C D G
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKD-G 229
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFV 286
+A I + + SE PD++T++SMI + CR + A +FN+M + G EPN
Sbjct: 230 NVADAETIMKKVFESE-MSPDTFTYTSMI-LGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC-GCLLNVMTQTPKEELGKL-VECV 344
++LI + R ++ + + GI P C G ++ + E+ +L V+
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
K Y L+ + G K A LF+ +S+D
Sbjct: 348 NKGCEPNVYTYTALISGLCVSG-LLKVAIGLFHRMSRD 384
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 130/287 (45%), Gaps = 26/287 (9%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP---WQVKT 164
P L+ Y G V MK +G+ P++ N LL + RA W+V+
Sbjct: 173 PVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRG 232
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
M G+SP+ TY++L+ AY + R E V EM+E G L+V YNTL+
Sbjct: 233 F---MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLC 289
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EAF ++M+ PD +T+ ++I RG+ +A+ + +EM AG PN+
Sbjct: 290 RAGAIEEAFGYKKEMEDY-GLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNV 348
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP-----DDRFCG-CLLNVMTQTPKEELG 338
V ++LI + + D+ + + + G+ P D+ G C L M + +
Sbjct: 349 VVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASR---- 404
Query: 339 KLVECVEKSNSKLGYVVKLLLEEQDIEGDF----KKEATELFNSISK 381
+ K +K+GY+ + IEG K+EA L N + K
Sbjct: 405 -----ILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRK 446
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM+ G+ PN+ TY+ +++ + + + + ++M +GL PN YA L+ Y R
Sbjct: 443 EMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREG 502
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++M + + + YN+L+ ++VG DEA E +++M + QP+ +T+
Sbjct: 503 SFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLE-KGFQPNDFTY 561
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+I S G + +AE + ++ML +G PN F+ +++ Y K+ + V L + E
Sbjct: 562 GGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLE 621
Query: 313 LGITPDDRFCGCLLNVMTQT 332
G+ PD+R G +++ ++ +
Sbjct: 622 KGLMPDNRLYGIVIHNLSSS 641
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 3/242 (1%)
Query: 97 TRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
R E I P+ + STLI+ Y + + V EEM+ G N++TYN L+ +
Sbjct: 230 VRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLC 289
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
RA + KEM D GL P+ TY +++ + + + EM G+ +V
Sbjct: 290 RAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+Y+TL+ G DEAF+I ++M S+ QP+ T+ ++I G++ A + +
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEM-SAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQ 408
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M + G+ + +I+ + + ++ LN + + GI+P+ ++N + Q +
Sbjct: 409 MTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGE 468
Query: 335 EE 336
E
Sbjct: 469 SE 470
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 98/200 (49%), Gaps = 4/200 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EK + P++ + +LI + A + + + + +EM G++P + YN L+D ++
Sbjct: 655 EKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDI 714
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I+ + GL PN TY +L+ Y +A D + +Y EM +G+ +Y+ L
Sbjct: 715 SHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVL 774
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
A C++ G +A I E+M + S F++++ RGK+ E + M++
Sbjct: 775 AAGCSNSGDLQQALFITEEMIARGYAIISS--FNTLVHGFCKRGKLQETVKFLHVMMDKD 832
Query: 280 FEPNLFVLTSLIQCYGKAQR 299
P+L + +++ G+A +
Sbjct: 833 IVPSLLTVENIVIGLGEAGK 852
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E D +++LI G D + Y+EM G +PN TY L+ A +
Sbjct: 517 ENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEK 576
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ + +M ++GL+PN YA +L Y ++ E S + M EKG+ LY ++
Sbjct: 577 AEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIH 636
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ G+ A + ++ + PDS + S+I+ + +A + +EM + G E
Sbjct: 637 NLSSSGHMQAAVSVLSVIEKN-GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIE 695
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALN 308
P + +LI + K +DD+ A N
Sbjct: 696 PGISCYNALIDGFCK---SDDISHARN 719
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 70 TGSSPKSYIWVNPKSP--RASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFDG 126
+G +P +I+ ++ L++ S ++ EK + D + +I ++G+
Sbjct: 587 SGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQA 646
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
++V ++ G+ P+ + Y +L+ +A + + EM G+ P + Y +L+
Sbjct: 647 AVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALID 706
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
+ ++ +++ + KG+ + Y TL+ G +A +++ +M +E
Sbjct: 707 GFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEML-TEGVA 765
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD++ +S + CS G + +A + EM+ G+ + +L+ + K + + V+
Sbjct: 766 PDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKF 824
Query: 307 LNRLPELGITP 317
L+ + + I P
Sbjct: 825 LHVMMDKDIVP 835
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 117/214 (54%), Gaps = 3/214 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
I P S ++K+ G A + L+V+ ++K+ KP TYN+++ + + ++ +
Sbjct: 129 IGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHEL 188
Query: 166 YKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
Y EM + G P+ TY+ L+ A+ + + + ++ EMK G+ + +Y TLLA+
Sbjct: 189 YHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYF 248
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++A + ++MK + C P +T++ +I G+V +A ++F ML+ G +P++
Sbjct: 249 KSG-DEKALGLVQEMK-DKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDV 306
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ +LI +GKA R +D ++ +++ L P+
Sbjct: 307 VLINNLINIFGKAGRLEDALKLFDQMRSLKCAPN 340
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 10/286 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S L+ + G D + +++EMKA G+ P Y LL ++ + +
Sbjct: 201 DTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKALGLV- 259
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM D G +P TY L++ G++ ED SV+ M + G + V L N L+ +
Sbjct: 260 QEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKA 319
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A ++F+ M+S + C P+ T++++I + + SEA + F +M G P+ F
Sbjct: 320 GRLEDALKLFDQMRSLK-CAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSF 378
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK--LVEC 343
+ LI + K R + + L + E G P L+N + + + E +E
Sbjct: 379 TYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLEL 438
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCN 389
E + ++++ G EA +LFN ++KK CN
Sbjct: 439 KENCGRSSARIYAVMIKNLGKCGR-PSEAVDLFN----EMKKIGCN 479
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A ++ ++ E+K + + Y ++ +G+ RP + ++
Sbjct: 412 PAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFN 471
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G +P+ Y +L+ RA E+ S R M+E G + +N +L A G
Sbjct: 472 EMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTG 531
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
++A E+F MK S +PD+ ++++++ S G EA + EM GFE +
Sbjct: 532 RPEQATEMFMKMKDSL-IKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITY 590
Query: 288 TSLIQCYGKAQRTDD 302
+S+++ GK D+
Sbjct: 591 SSILEAVGKVDEDDE 605
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 2/212 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+E+MKA GV P+ TY+ L+D + R + + +EM + G P Y SL+ A G+
Sbjct: 365 FEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 424
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
A+ E ++ E+KE + S +Y ++ G EA ++F +MK C PD +
Sbjct: 425 AKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKI-GCNPDVY 483
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
++++++ G + EA + M E G P+L ++ + R + ++
Sbjct: 484 AYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKM 543
Query: 311 PELGITPDDRFCGCLLNVMTQTPK-EELGKLV 341
+ I PD +L ++++ EE KL+
Sbjct: 544 KDSLIKPDAVSYNTILGSLSRSGMFEEAAKLM 575
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R ++ +IK G G ++++ EMK IG P++ YN L+ + RA + +
Sbjct: 444 RSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFS 503
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ M +NG +P+ N++ +L R E ++ +MK+ ++ YNT+L +
Sbjct: 504 ALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLS 563
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G +EA ++ +M S + D T+SS I GKV E
Sbjct: 564 RSGMFEEAAKLMREM-GSRGFEYDHITYSS---ILEAVGKVDE 602
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K + ++ + + D F+ L+ + A +FD ++ M+ G+ PN+ TYN L+
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ RA R + M G+ P TY + + +G++ + + +MK KG+ +
Sbjct: 412 LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ N L A++G EA +F ++ + PDS T++ M+ S G+V EA +
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLREN-GLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+EM+ G EP++ V+ SLI KA R D+ + +R+ ++ ++P
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 113/229 (49%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK++D + P+AF+ L+ ++G +G +Y+EM + KP+ ITYN +
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ ++ ++ + + ++ + P TY L+ + E+ + ++ EM + G
Sbjct: 865 ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ + ++N L+ +G T+ A ++F+ M +E +PD +++ ++ G+V EA
Sbjct: 925 KPNCAIFNILINGYGKIGDTETACQLFKRM-VNEGIRPDLKSYTILVDCLCLAGRVDEAL 983
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
FNE+ G +P+ +I GK+QR ++ + N + GI PD
Sbjct: 984 YYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 120/237 (50%), Gaps = 8/237 (3%)
Query: 86 RASKLKE--KSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
RA ++++ K DT E + P A++ T I +G +G + +E+MKA G+ P
Sbjct: 414 RAGRIEDALKLLDTM---ESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVP 470
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
N++ N L ++ R + KT++ + +NGL+P+ TY +++ Y + ++ +++
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
EM G + V + N+L+ G DEA+++F+ MK + P T++++++
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK-LSPTVVTYNTLLSGLGK 589
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+V +A +F M+ PN +L+ C+ K + ++ +++ + PD
Sbjct: 590 EGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPD 646
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 36/287 (12%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R + ++ +++ LI L +G L VY M + G+KP++ TY+ L+ +G+ +
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
V + KEM D GL PN T+ +R GRA ++ ++R M ++G + Y
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 218 TLLAMCADVGYTDEAFEIFEDMKS----------------------------------SE 243
L+ + G + A E+F MK+ ++
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD 361
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
PD TF+ ++ + EA A F+ M + G PNL +LI +A R +D
Sbjct: 362 GYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSK 350
++ L+ + +G+ P ++ ++ E GK VE EK +K
Sbjct: 422 LKLLDTMESVGVQPTAYTYITFIDYFGKSG--ETGKAVETFEKMKAK 466
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TL+ + G+ D + +M+A G P+++T+ L+D + +A+ + +
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +TY +L+ RA ED L + M+ G+Q + Y T +
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKS 450
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T +A E FE MK ++ P+ ++ + + G++ EA+ MFN + E G P+
Sbjct: 451 GETGKAVETFEKMK-AKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++CY K + D+ V L+ + G PD
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 12/256 (4%)
Query: 70 TGSSPKSYIW-----VNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAG 122
G +P ++ + V+ KS + ++L E + +R R P+A ++ +I +
Sbjct: 817 VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR----RCKPDAITYNIVISSLAKSN 872
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
N D L+ + ++ + +P TY L+D + + R + +++EM+D G PN +
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
L+ YG+ E +++ M +G++ + Y L+ G DEA F ++KS+
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
PD ++ +I ++ EA A++NEM G P+L+ SL+ G A +
Sbjct: 993 -GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051
Query: 303 VVRALNRLPELGITPD 318
R L G+ PD
Sbjct: 1052 AKRMYEELQLAGLEPD 1067
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + + T+ K G V +M+ G N +YN L+ + ++ +
Sbjct: 154 RRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALE 213
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y+ M GL P+ TY++L+ A G+ R E + + +EM++ G++ +V + + +
Sbjct: 214 VYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLG 273
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G DEA+EIF M E C PD T++ +I G++ A+ +F +M G +P+
Sbjct: 274 RAGKIDEAYEIFRRM-DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ +L+ + D +++ G PD L++V+ +
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R P + LI G + + ++EEM G KPN +N L++ G+
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++K M + G+ P+ +Y L+ A ++ L + E+K G+ YN ++
Sbjct: 949 QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++ +M++ PD +T++S++ G V +A+ M+ E+ AG EP+
Sbjct: 1009 GKSQRMEEALALYNEMRN-RGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067
Query: 284 LFVLTSLIQCY 294
+F +LI+ Y
Sbjct: 1068 VFTYNALIRGY 1078
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K +G+ P + +YN L+ + + ++K+M + G +P+ T+ LL +G++
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ +Y+EM + + YN +++ A D+A + F D+ SS+ +P T+
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD-FRPTPRTYGP 898
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I + G++ EA +F EM + G +PN + LI YGK T+ + R+ G
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 315 ITPD 318
I PD
Sbjct: 959 IRPD 962
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 11/163 (6%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R NE R D +++ L+ AG D L + E+K+ G+ P+ I YN +++ +G+++
Sbjct: 953 RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQ 1012
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + +Y EM + G+ P+ TY SL+ G A E +Y E++ G++ V YN
Sbjct: 1013 RMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYN 1072
Query: 218 TLLAMCADVGYT-----DEAFEIFEDMKSSENCQPDSWTFSSM 255
L+ GY+ + A+ ++++M + C P+ T++ +
Sbjct: 1073 ALIR-----GYSLSENPEHAYTVYKNM-MVDGCNPNIGTYAQL 1109
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LI YG G+ + +++ M G++P++ +Y L+D + A R +
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ GL P++ Y ++ G+++ E+ L++Y EM+ +G+ + YN+L+
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++A ++E+++ + +PD +T++++I S A ++ M+ G PN+
Sbjct: 1046 AGMVEQAKRMYEELQLA-GLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNI 1103
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 13/287 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++LI AG D +++ MK + + P ++TYN LL +G+ R + ++
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M SPN ++ +LL + + E L ++ +M + V YNT++
Sbjct: 601 ESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE-MLEAGFEPNLF 285
+ AF F +K S PD T +++ G++ +A ++ + M + F N
Sbjct: 661 NKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRS 718
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
L+ D + L GI +D F L+ V+ + +E + +
Sbjct: 719 FWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYA--YQIFD 776
Query: 346 KSNSKLGYVVKL----LLEEQDIEGDFKKEATELFNSISKDVKKAYC 388
K KLG L L + +E + ++A +LF KD+K C
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLF----KDMKNVGC 819
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
K+ G+ ++ YN L+ +V YT++A+++F+DMK+ C PD++TF+ ++ + GK
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV-GCAPDAFTFNMLLAVHGKSGK 838
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
++E ++ EM+ +P+ +I K+ D + L P R G
Sbjct: 839 ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898
Query: 325 LLNVMTQTPK-EELGKLVE 342
L++ + + + EE +L E
Sbjct: 899 LIDGLAKVGRLEEAMRLFE 917
>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
macrophylla]
Length = 381
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 137 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 196
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 197 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 256
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 257 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 311
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV N++ LG PD +LN
Sbjct: 312 VKDITVFERMIHLLSKXKKYSNVVEVFNKMRGLGYFPDSDVIAXVLN 358
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 72 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 131
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 132 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 191
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 192 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 250
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 284
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 63 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 181
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 182 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 241
Query: 312 ELGITPD 318
G+ D
Sbjct: 242 SSGVEID 248
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 266 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 325
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G
Sbjct: 326 SKXKKYSNVVEVFNKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDVYMEMQEVG 380
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E PN +++T+I Y + GN +G + + M+ G++P+ TY +L+ M + R
Sbjct: 276 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 335
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M + GL PN TY +L+ Y E S EM +KG+ SV+ YN L
Sbjct: 336 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 395
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G EA ++ ++M+ + PD+ T++ +I S G +A + NEML G
Sbjct: 396 VHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EP TSLI + R + ++ + G++PD
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I P+A ++ LI Y GN +++ EM + G++P +TY +L+ + R R
Sbjct: 417 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 476
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +++++ D G+SP+ + +++ + E + +EM K + +NTL+
Sbjct: 477 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 536
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +EA + ++MK +PD +++++I+ RG + +A + +EML GF
Sbjct: 537 QGRCREGKVEEARMLLDEMK-RRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 595
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P L +LI+C K Q D L + GI+PDD
Sbjct: 596 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 634
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 7/230 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+++ R K I P+ ++ L+ G ++ +EM+ G+ P+ ITYN L
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + ++ EM G+ P TY SL+ R ++ ++ ++ ++G+
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Query: 210 QLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSE 267
V ++N ++ CA+ G + AF + ++M ++ PD TF++++ CR GKV E
Sbjct: 491 SPDVIMFNAMVDGHCAN-GNVERAFMLLKEM-DRKSVPPDEVTFNTLMQ-GRCREGKVEE 547
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
A + +EM G +P+ +LI YG+ D R + + +G P
Sbjct: 548 ARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 597
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPW 160
I+P++++ +LI G + ++++M IG+ PN +TYN L+D G +R +
Sbjct: 315 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 374
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRA-YGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ EM G+ P+ +TY L+ A + R GE + +EM++KG+ YN L
Sbjct: 375 SYR---DEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD-DMIKEMRKKGIIPDAITYNIL 430
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G +AF++ +M S+ +P T++S+I + S R ++ EA+ +F ++L+ G
Sbjct: 431 INGYSRCGNAKKAFDLHNEML-SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ + +++ + + L + + PD+
Sbjct: 490 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 529
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ ++ + GN + + +EM V P+ +T+N L+ R + + + +
Sbjct: 493 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 552
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ P+ +Y +L+ YGR +D V EM G ++ YN L+
Sbjct: 553 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
D A E+ ++M ++ PD T+ S+I
Sbjct: 613 QEGDLAEELLKEM-VNKGISPDDSTYLSLI 641
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TLI YG G+ V +EM +IG P ++TYN L+ + + + + +
Sbjct: 563 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 622
Query: 167 KEMTDNGLSPNWNTYASLLRAYG 189
KEM + G+SP+ +TY SL+ G
Sbjct: 623 KEMVNKGISPDDSTYLSLIEGMG 645
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 33/298 (11%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+Y EM + + + T+N +++ + + + + + M G PN +Y +++ Y
Sbjct: 236 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 295
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
E + M+ KG++ Y +L++ G +EA +F+ M P++
Sbjct: 296 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI-GLVPNA 354
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRA 306
T++++I +G + A + +EM++ G P++ L+ G+ DD+++
Sbjct: 355 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 414
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQT---------PKEELGKLVECVEKSNSKLGYVVKL 357
+ + GI PD L+N ++ E L K +E + + L YV+
Sbjct: 415 MRK---KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS- 470
Query: 358 LLEEQDIEGDFKKEATELFNSI-----SKDVKKAYCNCLID-LCVNLNLLENACKLLE 409
+ KEA +LF I S DV N ++D C N N +E A LL+
Sbjct: 471 -------RRNRMKEADDLFEKILDQGVSPDV--IMFNAMVDGHCANGN-VERAFMLLK 518
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+R R ++ + MKEKG+ + N +L++ + + A+ ++ +M
Sbjct: 185 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLR 244
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+TF+ M+ + GK+ +A M GF+PN+ ++I Y +
Sbjct: 245 -ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 303
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
R L+ + GI PD G L++ M + + E
Sbjct: 304 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 336
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQV 162
PN ++TLI Y G D + + M + G++PN+I+YN +++ + G K W+
Sbjct: 43 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWE- 101
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I +EM G +P+ TY +LL Y + L ++ EM G+ SV Y L+
Sbjct: 102 --ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINS 159
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ A E F+ M+ +P+ T++++I S +G ++EA + NEM E+GF P
Sbjct: 160 MCKARNLNRAMEFFDQMR-IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSP 218
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + I + +R ++ + + + E G+ PD
Sbjct: 219 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 254
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ Y GNF L ++ EM GV P+++TY L+++M +A+ + +
Sbjct: 114 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 173
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M GL PN TY +L+ + R + + EM E G SV YN + +
Sbjct: 174 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 233
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA + ++M + PD ++S++I+ +G++ A M EM+E G P+
Sbjct: 234 ERMEEALGVVQEM-VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 292
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+SLIQ + +R + + ++G+ PD+ L+N
Sbjct: 293 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLIN 333
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 34/234 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI A N + + +++M+ G++PN TY L+D R + I EMT
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G SP+ TY + + + E+ L V +EM EKG+ V Y+T+++ G D
Sbjct: 213 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 272
Query: 231 EAFEIFEDM-----------------------KSSENCQ-----------PDSWTFSSMI 256
AF++ ++M + +E C PD +T++++I
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 332
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
G +++A + +EM+ GF P+ + LI K RT + R L +L
Sbjct: 333 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 386
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 106 IDPNAFSTLIKLYGTA--GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN S + + G G+ + EEM G P+ +TYN LL+ + Q
Sbjct: 76 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I+ EM NG+SP+ TY +L+ + +AR + + +M+ +G++ + Y TL+
Sbjct: 136 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGF 195
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +EA+ I +M S P T+++ I ++ EA + EM+E G P+
Sbjct: 196 SRQGLLNEAYRILNEMTES-GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 254
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +++I + + D + + E G++PD
Sbjct: 255 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 289
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 53/237 (22%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I + G D + +EM GV P+ +TY++L+ + +R + +
Sbjct: 254 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 313
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG-----MQLSVTL------ 215
+EM D GL P+ TY +L+ AY L ++ EM KG + SV +
Sbjct: 314 QEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQ 373
Query: 216 ------------------------YNTLLAMCADV---------------GYTDEAFEIF 236
Y+TL+ C+++ G EA +F
Sbjct: 374 ARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF 433
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
E M N +P ++ +I CRG + +A ++ EM+ +GF P+ + +LI+
Sbjct: 434 ESM-VERNHKPGEAVYNVIIH-GHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIK 488
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + +SPN TY L+R + + L + EM+ G +V YNTL+ +G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
DEAF + + M SS+ QP+ +++ +I G + EA + EM GF P+
Sbjct: 61 IDEAFGLLKSM-SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+L+ Y K + + G++P L+N M +
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 163
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 36/263 (13%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +K R+ P+ F +I+ + AG+ + + M+ G P ++TYN L+ + R
Sbjct: 521 RMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKH 580
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + ++ +M+ G++PN +TY ++R Y + + ++KE G++L V +Y
Sbjct: 581 QVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYE 640
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSE--------NCQPDSW------------------- 250
TLL C G A + +M + N D W
Sbjct: 641 TLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKED 700
Query: 251 -------TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
TF+S I C G + AE + EM + G +PN+ T+LI+ + + D
Sbjct: 701 GIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRA 760
Query: 304 VRALNRLPELGITPDDRFCGCLL 326
++ + G+ PD+ CL+
Sbjct: 761 LKCFEEMKSAGLKPDEAAYHCLV 783
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + +++ Y + CL V+E +K G KP +I+Y L++ + + + I KE
Sbjct: 392 DVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKE 451
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M +G+ N TY+ L+ + + S++ +M + G+Q +YN L+ +G
Sbjct: 452 MESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGN 511
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A IFE M+ E QP + TF +I + G + A + M +G P +
Sbjct: 512 MDRAIRIFERMQ-KERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYN 570
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + + + V L+++ GI P++
Sbjct: 571 ALIHGLVRKHQVEKAVSVLDKMSIAGIAPNE 601
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 41/266 (15%)
Query: 95 YDTRARNEKWR---IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+ RA E R I+PNAF ++L+ Y AG+ G L+ EEMK+ G++ ++TY+ L
Sbjct: 268 HHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSIL 327
Query: 150 LDTMGRAKRPWQVKTIYK-----------------------------------EMTDNGL 174
+ G+ ++K EM ++G+
Sbjct: 328 ISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGI 387
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+ Y S++ Y + + L V+ +KE G + ++ Y L+ + VG +A
Sbjct: 388 DAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIA 447
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
I ++M+ S + ++ T+S +I + A ++F +M+++G +P+ + L++ +
Sbjct: 448 ISKEME-SHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAF 506
Query: 295 GKAQRTDDVVRALNRLPELGITPDDR 320
K D +R R+ + + P +R
Sbjct: 507 CKMGNMDRAIRIFERMQKERMQPSNR 532
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 8/223 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y T+ + ++D + TL++ +G L V EM + N YN L+D
Sbjct: 623 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWA 682
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R W+ + K+M ++G+ PN +T+ S + A +A + +V +EM + G++ +V
Sbjct: 683 RRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVK 742
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE----- 269
+ TL+ A V D A + FE+MKS+ +PD + ++T R V E
Sbjct: 743 TFTTLIKGWARVSLPDRALKCFEEMKSA-GLKPDEAAYHCLVTSLLSRATVMEGSTYTGI 801
Query: 270 -AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV-RALNRL 310
++ EM E +L + K +RT + AL R+
Sbjct: 802 FSVCREMFENDLTVDLRTAVHWSKWLHKIERTGGALTEALQRI 844
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 1/217 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F ++ Y G+ +E M+A G++PN + +L+ A + +EM
Sbjct: 254 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMK 313
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ TY+ L+ YG+ + ++++E K K L+ +Y+ ++ G D
Sbjct: 314 SEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMD 373
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ +M+ P + SM+ + + +F + E GF+P + L
Sbjct: 374 RAEELVREMEEDGIDAPID-VYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCL 432
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
I Y K + + + GI +++ L+N
Sbjct: 433 INLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLIN 469
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 36/243 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT---MGRAKRPWQV-KTIY 166
+S LI + +F +++E+M G++P+ YN L++ MG R ++ + +
Sbjct: 464 YSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQ 523
Query: 167 KE-------------------------------MTDNGLSPNWNTYASLLRAYGRARYGE 195
KE M +G +P TY +L+ R E
Sbjct: 524 KERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVE 583
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+SV +M G+ + Y ++ A G +AFE F +K S + D + + ++
Sbjct: 584 KAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES-GLKLDVYIYETL 642
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ C G++ A A+ EM N F+ LI + + + L ++ E GI
Sbjct: 643 LRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGI 702
Query: 316 TPD 318
P+
Sbjct: 703 PPN 705
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 29/70 (41%)
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+P F M+ + RG A A F M G EPN FV TSL+ Y A +
Sbjct: 248 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALS 307
Query: 306 ALNRLPELGI 315
+ + GI
Sbjct: 308 CVEEMKSEGI 317
>gi|302769928|ref|XP_002968383.1| hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii]
gi|300164027|gb|EFJ30637.1| hypothetical protein SELMODRAFT_169661 [Selaginella moellendorffii]
Length = 532
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L +YEE+KA +K N+++Y L+ G AK +V + ++M G+ PN T+ SL+ A
Sbjct: 300 LRLYEELKAKEIKLNVLSYGTLIQIFGEAKMLDRVFQMKRDMDSTGIVPNVVTWTSLVGA 359
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS------ 241
+ E TL VY++M + G + YN LL+ C D G +D+A ++F + K+
Sbjct: 360 CSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRILA 419
Query: 242 -----------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
SE +PDS +++M+ C K +AEA+ EM+ +G P+ L
Sbjct: 420 GIEVQDESVIFSEWVRPDSVAYNTMMRACDKLPK--QAEAVMQEMVSSGLRPDKRSWCIL 477
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I YG V+A R+ + GI D
Sbjct: 478 INSYGCNGDKQGAVQAFQRMGKSGIIAD 505
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 34/203 (16%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR-------------------------- 155
G+ V++ +++ GV P+M +Y L+D GR
Sbjct: 191 GDLQSVFQVFQALESTGVLPDMYSYCILIDACGRCGDTEKATAIFEGLLKAGTVLNVYVC 250
Query: 156 -------AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
A V +Y++M +G++ + TY + +A ++ L +Y E+K K
Sbjct: 251 NSMMNAHAGNIQHVLRLYRQMQGSGIAADVTTYNIVFKACRLSKNPVLALRLYEELKAKE 310
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++L+V Y TL+ + + D F++ DM S+ P+ T++S++ CS V +
Sbjct: 311 IKLNVLSYGTLIQIFGEAKMLDRVFQMKRDMDST-GIVPNVVTWTSLVGACSKGALVEKT 369
Query: 269 EAMFNEMLEAGFEPNLFVLTSLI 291
++ +M++AG PN F L+
Sbjct: 370 LQVYQDMVQAGCTPNAFTYNFLL 392
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 88/240 (36%), Gaps = 33/240 (13%)
Query: 4 NLCYSTCSLFSTPKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNP 63
N+ + C L P L R + ++ L+ S +L +Q +
Sbjct: 284 NIVFKACRLSKNPVLALRLYEELKAKEIKLNVLSYGTL------IQIFGEAKMLDRVFQM 337
Query: 64 QYPHGKTGSSPKSYIWVN-PKSPRASKLKEKSYDTRARNEKWRIDPNAFST--LIKLYGT 120
+ TG P W + + L EK+ + PNAF+ L+
Sbjct: 338 KRDMDSTGIVPNVVTWTSLVGACSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSACVD 397
Query: 121 AGNFDGCLNVYEEMKAIG------------------VKPNMITYNNLLDTMGRA--KRPW 160
G D ++ E K G V+P+ + YN TM RA K P
Sbjct: 398 GGQSDKAHKLFREWKTSGRILAGIEVQDESVIFSEWVRPDSVAYN----TMMRACDKLPK 453
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q + + +EM +GL P+ ++ L+ +YG + + ++ M + G+ V Y ++
Sbjct: 454 QAEAVMQEMVSSGLRPDKRSWCILINSYGCNGDKQGAVQAFQRMGKSGIIADVVAYTAII 513
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N ++ D G F++F+ ++S+ PD +++ +I C G +A A+F +L
Sbjct: 181 NMIMQKFRDQGDLQSVFQVFQALEST-GVLPDMYSYCILIDACGRCGDTEKATAIFEGLL 239
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+AG N++V S++ + A V+R ++ GI D
Sbjct: 240 KAGTVLNVYVCNSMMNAH--AGNIQHVLRLYRQMQGSGIAAD 279
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+++ F++LI+ Y AG F + +++ MK+I V P+++T+N+L+ + + R K
Sbjct: 145 KLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKE 204
Query: 165 IYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+Y EM G+SP+ TY L+R + + ++ +REM+ V YNTL+
Sbjct: 205 VYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGL 264
Query: 224 ADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G A + M K E P+ T++++I + +V EA + EM G +P
Sbjct: 265 CRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKP 324
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLP-ELGITPD 318
N+ +L++ +A + D + L R+ + G +PD
Sbjct: 325 NMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPD 361
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+ + D + EM++ +++TYN L+D + RA + + +
Sbjct: 218 DTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLV 277
Query: 167 KEMTDN--GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
M GL+PN TY +L+R Y + E+ L V EM +G++ ++ YNTL+
Sbjct: 278 NGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLC 337
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+ D+ ++ E MKS PD++TF+++I + C G + EA +F M
Sbjct: 338 EAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESM 388
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN ++TLI+ Y + L V EEM + G+KPNMITYN L+ + A + ++K
Sbjct: 287 LNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMK 346
Query: 164 TIYKEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ + M +D G SP+ T+ +++ + A ++ L V+ MK+ + Y+TL+
Sbjct: 347 DVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRS 406
Query: 223 CADVGYTDEAFEIFEDMKSSE------NCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
G D A ++F+++ E +P + +++ + GK +AE + +++
Sbjct: 407 LCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLM 466
Query: 277 EAG 279
+ G
Sbjct: 467 KRG 469
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 39/210 (18%)
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
+ SL+R+Y A ++++ +++ MK + SV +N+L+++ G T+ A E++++M
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210
Query: 241 SSENCQPDSWTFSSMIT-ICS---------------------------------CR-GKV 265
+ PD+ T++ +I C CR GKV
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKV 270
Query: 266 SEAEAMFNEMLEA--GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
A + N M + G PN+ T+LI+ Y Q ++ + L + G+ P+
Sbjct: 271 RIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYN 330
Query: 324 CLLNVMTQTPKEELGKLVECVEKSNSKLGY 353
L+ + + K L K+ + +E+ S G+
Sbjct: 331 TLVKGLCEAHK--LDKMKDVLERMKSDGGF 358
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+T+I L+ AGN D L V+E MK + + +Y+ L+ ++ + + ++
Sbjct: 361 DTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLF 420
Query: 167 KEMTDNG----------LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
E+ + L+ ++N L +G+ + E V R++ ++G Q +
Sbjct: 421 DELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAE---RVIRQLMKRGTQDPQSYT 477
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
++ C + Y + +E+ M + PD + +I + K A+ +ML
Sbjct: 478 TVIMGHCKEGAY-ESGYELLMWM-LRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKML 535
Query: 277 EAGFEP 282
++ ++P
Sbjct: 536 KSSYQP 541
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N+ R + +++T+I AG D ++++++M+ P + TY ++ + R
Sbjct: 277 NKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNL 336
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ EM + PN +TY ++ A + R +++ + EM EKG+ SV YN L+
Sbjct: 337 EGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALI 396
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G + A EI M+S+ NC+P+ T++ +I S R V +A + ++MLE+
Sbjct: 397 RGYCEEGRIEAALEILGLMESN-NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKL 455
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
P+L SLI KA D + L+ L E G+ PD ++ + ++ + E
Sbjct: 456 TPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRME 511
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 140/301 (46%), Gaps = 42/301 (13%)
Query: 117 LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSP 176
L+G N +G ++++ EM+ +PN+ TY ++D M + ++ + + I EM + GL P
Sbjct: 329 LFGNDRNLEG-MDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVP 387
Query: 177 NWNTYASLLRAY---GRA--------------------------------RYGEDTLSVY 201
+ TY +L+R Y GR ++ +++
Sbjct: 388 SVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLL 447
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICS 260
+M E + S+ YN+L+ + G+ D A+++ + +K + PD WT+S I T+C
Sbjct: 448 SKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKEN-GLVPDQWTYSVFIDTLCK 506
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ ++ EA +FN + E G + N + T+LI + KA + D+ + L R+ P+
Sbjct: 507 SK-RMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSS 565
Query: 321 FCGCLLNVMTQTPKEELG-KLVECVEKSNSKLGYVV-KLLLEEQDIEGDFKKEATELFNS 378
L+ + + K + G +VE + K K +L+EE EGDF A +FN
Sbjct: 566 TYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDF-DHANRVFNQ 624
Query: 379 I 379
+
Sbjct: 625 M 625
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
K+++ +++ L+ + D VY EM + PN+ T N +++ + +
Sbjct: 174 KFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA 233
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ GLSP+ TY SL+ Y R V+ M KG + + Y T++
Sbjct: 234 NLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHG 293
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ G DE +F+ M+ ++C P T++ +I + E +FNEM E EP
Sbjct: 294 LCEAGRIDEGISLFKKMR-EDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEP 352
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
N+ T ++ K ++ D+ R LN + E G+ P
Sbjct: 353 NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVP 387
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++LI + AG+FD + + +K G+ P+ TY+ +DT+ ++KR + ++ +
Sbjct: 462 YNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLK 521
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ N Y +L+ + +A ++ +S+ M + + + YN+L+ G
Sbjct: 522 EKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQ 581
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
E + E+M S +P T++ +I G A +FN+M+ G +P+++ T+
Sbjct: 582 EGLSMVENM-SKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I Y + + + R+ E G+ PD
Sbjct: 641 IHTYCTSGNVKEAEGMMARMIEAGVMPD 668
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S I + + +++ +K G+K N + Y L+D +A + + ++ + M
Sbjct: 497 YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMH 556
Query: 171 DNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
PN +TY SL+ YG + G ++ LS+ M + G++ +V Y L+ G
Sbjct: 557 SEDCLPNSSTYNSLI--YGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGD 614
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A +F M S + +PD +T+++ I G V EAE M M+EAG P+ T
Sbjct: 615 FDHANRVFNQMVSFGH-KPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYT 673
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
LI Y + D L R+ + G P
Sbjct: 674 LLISAYERLGLAYDAFNVLKRMLDAGCDP 702
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
R+ + +LSV YN LL M A DE ++ +M ++ P+ +T ++M+ S
Sbjct: 168 RDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEM-LNDMIVPNIYTLNTMVNAYSK 226
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
G + EA +++ +AG P+ F TSLI Y + + + N +P G
Sbjct: 227 MGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI + AG D +++ E M + PN TYN+L+ + + + + ++ + M+
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P TY L+ R + V+ +M G + V Y + G
Sbjct: 592 KMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVK 651
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + M + PDS T++ +I+ G +A + ML+AG +P+ + +L
Sbjct: 652 EAEGMMARMIEA-GVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNL 710
Query: 291 I 291
I
Sbjct: 711 I 711
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 86 RASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A K+ E S R +E + + +++LI G L++ E M +GVKP +
Sbjct: 541 KAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVA 600
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY L++ M R ++ +M G P+ TY + + Y + ++ + M
Sbjct: 601 TYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARM 660
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
E G+ Y L++ +G +AF + + M + C P ++++I
Sbjct: 661 IEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDA-GCDPSHPIWNNLI 711
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 134/288 (46%), Gaps = 11/288 (3%)
Query: 96 DTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
D RN + PN F TLIK Y ++ + + + M A GV P++ YN L+ +
Sbjct: 475 DQMIRN---GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
RAK+ + K + +M + G+ PN +TY + + Y ++ + +++M G+ +
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+Y L+ DVG T EA F+ M + PD +S++I S GK EA +F
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCM-LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN----VM 329
+ L+ G P++F+ SLI + K + + + + GI P+ L+N
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCK 710
Query: 330 TQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFN 377
+ E E + K S GY+ +L++ EG+ +K A LF+
Sbjct: 711 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK-ALSLFH 757
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 40/272 (14%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ I G D L V + M G+ P+ TY L+D + KR + K I
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M +GL+PN TY +L+ + + E+ L + EM +G++L+V YN ++ A
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSW----------------------------------- 250
G +A +F +M + +PD+W
Sbjct: 394 AGEMAKAMSLFNEMLMA-GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+S +I+ + +A + ++M+ G +PN+F+ +LI+ Y + R + + L +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 311 PELGITPDDRFC-GCLLNVMTQTPKEELGKLV 341
G+ P D FC CL+ + + K E K++
Sbjct: 513 IANGVLP-DLFCYNCLIIGLCRAKKVEEAKML 543
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEE--MKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
D + LI G GN + L+++ E K++G ++ +N+L+D+ + + + +
Sbjct: 732 DGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG---SLSAFNSLIDSFCKHGKVIEARE 788
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M D L+PN TY L+ AYG+A E+ ++ +M+ + + + Y +LL
Sbjct: 789 LFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYN 848
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G + +F+DM+ + D+ + M + GK EA + N+ L G +
Sbjct: 849 QIGNRFKMISLFKDME-ARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED 907
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
V +LI K ++ V+ L+ + + ++ + C LL
Sbjct: 908 DVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 949
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F I + G + +V+ + G P +I NNL+ + +A +Y M
Sbjct: 174 VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSM 233
Query: 170 TDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + P+ TY ++++A+ G G+ LS EM EK + ++ YN +
Sbjct: 234 VEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLS---EM-EKECKPNLFTYNAFIGGLCQT 289
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA E+ + + + PD T++ ++ + + EA+ +F M +G PN F
Sbjct: 290 GAVDEALEV-KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGI 315
T+LI + K ++ +R + + G+
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGL 377
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF++LI + G ++++M + PN++TY L+D G+A+ + + ++ +
Sbjct: 768 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 827
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + PN TY SLL +Y + +S++++M+ +G+ Y + + G
Sbjct: 828 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 887
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ EA ++ + E + + F ++I ++S + +EM + +
Sbjct: 888 SLEALKLL-NKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 946
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
+L+ + K+ D+ + L + LG P
Sbjct: 947 TLLLGFYKSGNEDEASKVLGVMQRLGWVP 975
>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
succulentifolia]
Length = 382
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 138 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 197
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 198 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 258 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGX 312
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 313 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 359
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 71 VTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 130
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 131 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 190
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 191 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 249
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 250 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 285
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK +++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLI 63
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LSV+ EM+E
Sbjct: 64 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 182
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 183 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 242
Query: 312 ELGITPD 318
G+ D
Sbjct: 243 SSGVDID 249
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 150/325 (46%), Gaps = 17/325 (5%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +S I G ++ +++ +EM A+G+ P++ITY+ ++D + +
Sbjct: 252 VKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAF 311
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM G+ N TY+ ++ A + E+ +++ REM+E G+ V Y++ ++ C
Sbjct: 312 RLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISAC 371
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A G +EA + +M E P++ ++ +I+ C+ RG+ EA + EM G P+
Sbjct: 372 AKKGQWEEAVGLLREMP-MEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPD 430
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+ ++ I +A R + + L +P G+TP+ ++ +T + ++ VE
Sbjct: 431 VINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIA--VEL 488
Query: 344 VEKSNSKLGYVVKLLLEEQDIE----GDFKKEATELF-----NSISKDVKKAYCNCLIDL 394
+ + + G ++ I G +EA +LF I+ DV CN I+
Sbjct: 489 LREMPAH-GLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDV--VSCNTAINA 545
Query: 395 CVNLNLLENACKLLELGLTLEVYTD 419
C E A +L T+ + D
Sbjct: 546 CAQGGWWEEALDVLGEMPTMGLVPD 570
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 34/242 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S I A ++ L + EM A G+ PN+I+YN+ +D + R + +EM
Sbjct: 434 YSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMP 493
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+GL+P+ TY++++ + R E+ L ++REM+ +G+ V NT + CA G+ +
Sbjct: 494 AHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWE 553
Query: 231 EAFEIFEDMK----------------------------------SSENCQPDSWTFSSMI 256
EA ++ +M S+ PD+ ++ +
Sbjct: 554 EALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAM 613
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ CS G EA + +ML G P++ S I K R + L ++P G+
Sbjct: 614 SACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLA 673
Query: 317 PD 318
PD
Sbjct: 674 PD 675
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 3/215 (1%)
Query: 106 IDPNAFSTLIKLYGTA--GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PNA S I + A G + +++ +EM+A GV P++I Y+ +D +A R Q
Sbjct: 392 VTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQAL 451
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM GL+PN +Y S + A + + + + REM G+ V Y+ ++A C
Sbjct: 452 WLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASC 511
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A +EA ++F +M+ + PD + ++ I C+ G EA + EM G P+
Sbjct: 512 AMGRQWEEALDLFREMQ-RQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPD 570
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ I K R +++ L + +G+TPD
Sbjct: 571 AISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPD 605
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 53 SSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNA-- 110
S+ P + ++ G+ P S++ + + K+ D R ++ + P++
Sbjct: 129 SALPRQQRKSKADKGGRQAGMPMSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQN 188
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S+ I G A ++ + + M A G P+++TY++ + + R + + + M
Sbjct: 189 YSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMK 248
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN Y++ + A + E + + +EM G+ V Y+T++ CA G +
Sbjct: 249 GQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWE 308
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
AF + +M ++ + T+S +I C+ G+ EA A+ EM E G P++ +S
Sbjct: 309 PAFRLLMEMP-TKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSST 367
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I K + ++ V L +P G+TP+
Sbjct: 368 ISACAKKGQWEEAVGLLREMPMEGVTPN 395
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S +I ++ L+++ EM+ G+ P++++ N ++ + + + EM
Sbjct: 504 YSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMP 563
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL P+ +Y + + A + ++ + + REM G+ Y ++ C+ G
Sbjct: 564 TMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWK 623
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + DM + PD T++S I C+ G+ EA + +M G P++ +
Sbjct: 624 EALVLLRDMLAV-GLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAA 682
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
I G + V L + LG++P++
Sbjct: 683 IDACGNGDQWGTAVEVLFEMRALGVSPNE 711
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 4/213 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ D ++ I P+ S T I G ++ L+V EM +G+ P+ I+Y
Sbjct: 518 EEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTA 577
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D + R ++ + +EM+ GL+P+ +Y + A ++ L + R+M G+
Sbjct: 578 IDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGL 637
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
V YN+ + CA G EA + M + PD +F++ I C + A
Sbjct: 638 SPDVVTYNSAINACAKGGRWKEATVLLRQMPTF-GLAPDVNSFNAAIDACGNGDQWGTAV 696
Query: 270 AMFNEMLEAGFEPN-LFVLTSLIQCYGKAQRTD 301
+ EM G PN LT++ C ++ D
Sbjct: 697 EVLFEMRALGVSPNEATYLTAMYACKRCGEKDD 729
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + E+ R + F+ +I +YG A + V+ EMK+IG KPN+ TY L++ R
Sbjct: 413 RMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREG 472
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + +++EM G P+ Y +L+ AY RA + ++ M+ G + YN
Sbjct: 473 LCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYN 532
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G ++A +FE++K P + ++ + G + E + ++ +
Sbjct: 533 ILVDAYGRAGLHEDAEAVFEELK-QRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK 591
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+G P+ F L +++ Y +A R DD+ R L + G
Sbjct: 592 SGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRG 628
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L++ Y AG+ V EM+ G+ PN YN LD + +A+ + +Y+
Sbjct: 354 DTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQR 413
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M N T+ ++ YG+A+ ++ V+ EMK G + ++ Y L+ A G
Sbjct: 414 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGL 473
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+FE+M+ + + +PD + +++++ S G A +F+ M G EP+
Sbjct: 474 CEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYN 532
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ YG+A +D L + G++P
Sbjct: 533 ILVDAYGRAGLHEDAEAVFEELKQRGMSP 561
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 8/223 (3%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ VY+ MK + N T+ +++ G+AK+P ++ EM G PN TY +L+ A
Sbjct: 408 VEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNA 467
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R E V+ EM++ G + V YN L+ + G A EIF M+ C+P
Sbjct: 468 FAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM-GCEP 526
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVV 304
D +++ ++ G +AEA+F E+ + G P + L+ + G A R ++V+
Sbjct: 527 DRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVM 586
Query: 305 RALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK 346
L++ G+TPD +LN + + +++ +L+ +E+
Sbjct: 587 AQLHK---SGLTPDTFALNAMLNAYARAGRLDDMERLLAAMER 626
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P++I YN L+++ G+ ++ + ++IY + + P +TYA LLRAY A
Sbjct: 315 RPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEG 374
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
V EM+E G+ + T+YN L T++A E+++ MK E C+ ++ TF+ MI +
Sbjct: 375 VISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK-RERCRANTETFTLMINVY 433
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + +FNEM G +PN+ T+L+ + + + + + G PD
Sbjct: 434 GKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 492
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R D ++ LI+ YG + ++Y + P TY LL A + +
Sbjct: 314 FRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAE 373
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM ++G+ PN Y + L +AR E + VY+ MK + + + + ++ +
Sbjct: 374 GVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVY 433
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ ++F +MKS C+P+ T+++++ + G +AE +F EM +AG EP+
Sbjct: 434 GKAKQPMSSMKVFNEMKSI-GCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 492
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ +L++ Y +A + + +G PD
Sbjct: 493 VYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPD 527
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 37/204 (18%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L+ YG AG + V+EE+K G+ P M ++ LL R+ + + +
Sbjct: 527 DRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVM 586
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ +GL+P+ ++L AY RA +D + M+ +G V YN +
Sbjct: 587 AQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRG-DADVGTYNVAVNAYGRA 645
Query: 227 GYTDE-----------------------------------AFEIFEDMKSSENCQPDSWT 251
GY + E+M + C PD+ T
Sbjct: 646 GYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDA-GCYPDAGT 704
Query: 252 FSSMITICSCRGKVSEAEAMFNEM 275
++ CS +V + A+ M
Sbjct: 705 ARVLLAACSDERQVEQVTAIVRSM 728
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 120/230 (52%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I + G+ D + Y EM + PN++TYN+++ + +A+ + +
Sbjct: 11 DVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVL 70
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M +G+ P+ TY S++ + + ++ + ++M+ G++ V YN+L+
Sbjct: 71 TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKN 130
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +IF+ M + +PD T+ +++ + +G + E + + M+ G PN +V
Sbjct: 131 GRCTEARKIFDSM-TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ L+ Y K ++ ++ + +++ + G+ P+ G +++V+ ++ + E
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVE 239
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R++ D +++L+ G +++ M G+KP++ TY LL
Sbjct: 107 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKG 166
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
++ + M NG+ PN ++ L+ AY + E+ + V+ +M+++G+ + Y
Sbjct: 167 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 226
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
T++ + G ++A FE M E +PDS ++S+I K +AE +F EML+
Sbjct: 227 TVIDVLCKSGRVEDAMLYFEQM-IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLD 285
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + S+I + K R + V+ + + +G+ PD
Sbjct: 286 RGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPD 326
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 71/251 (28%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++++ + ++G + ++M++ GV+P+++TYN+L+D + + R + + I+
Sbjct: 81 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 140
Query: 167 KEMTDNGLSPNWNTYASLLR-----------------------------------AYGRA 191
MT GL P+ TY +LL+ AY +
Sbjct: 141 DSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 200
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
E+ + V+ +M+++G+ + Y T++ + G ++A FE M E +PDS
Sbjct: 201 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM-IDEGLRPDSIV 259
Query: 252 FSSMI----------------------TIC------------SCR-GKVSEAEAMFNEML 276
++S+I IC C+ G+V E+ +F+ M+
Sbjct: 260 YNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMV 319
Query: 277 EAGFEPNLFVL 287
G +P++ L
Sbjct: 320 RIGVKPDIITL 330
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Query: 169 MTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M D+G P+ +Y++++ + + + T S Y EM +K + +V YN+++A
Sbjct: 1 MADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKA 60
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D+A E+ M S PD T++S++ G+ EA +M G EP++
Sbjct: 61 QTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVT 119
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
SL+ K R + + + + + G+ PD G LL
Sbjct: 120 YNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQ 160
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++T+I Y + GN +G + + M+ G++P+ TY +L+ M + R + +
Sbjct: 260 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 319
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + GL PN TY +L+ Y E S EM +KG+ SV+ YN L+
Sbjct: 320 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 379
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++ ++M+ + PD+ T++ +I S G +A + NEML G EP
Sbjct: 380 EGRMGEADDMIKEMR-KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 438
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
TSLI + R + ++ + G++PD
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I P+A ++ LI Y GN +++ EM + G++P +TY +L+ + R R
Sbjct: 395 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 454
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +++++ D G+SP+ + +++ + E + +EM K + +NTL+
Sbjct: 455 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 514
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +EA + ++MK +PD +++++I+ RG + +A + +EML GF
Sbjct: 515 QGRCREGKVEEARMLLDEMK-RRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 573
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P L +LI+C K Q D L + GI+PDD
Sbjct: 574 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDD 612
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 7/230 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+++ R K I P+ ++ L+ G ++ +EM+ G+ P+ ITYN L
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + ++ EM G+ P TY SL+ R ++ ++ ++ ++G+
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 210 QLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSE 267
V ++N ++ CA+ G + AF + ++M ++ PD TF++++ CR GKV E
Sbjct: 469 SPDVIMFNAMVDGHCAN-GNVERAFMLLKEM-DRKSVPPDEVTFNTLMQ-GRCREGKVEE 525
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
A + +EM G +P+ +LI YG+ D R + + +G P
Sbjct: 526 ARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 575
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPW 160
I+P++++ +LI G + ++++M IG+ PN +TYN L+D G +R +
Sbjct: 293 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 352
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRA-YGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ EM G+ P+ +TY L+ A + R GE + +EM++KG+ YN L
Sbjct: 353 SYR---DEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD-DMIKEMRKKGIIPDAITYNIL 408
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G +AF++ +M S+ +P T++S+I + S R ++ EA+ +F ++L+ G
Sbjct: 409 INGYSRCGNAKKAFDLHNEM-LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ + +++ + + L + + PD+
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 507
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ ++ + GN + + +EM V P+ +T+N L+ R + + + +
Sbjct: 471 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 530
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ P+ +Y +L+ YGR +D V EM G ++ YN L+
Sbjct: 531 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
D A E+ ++M ++ PD T+ S+I
Sbjct: 591 QEGDLAEELLKEM-VNKGISPDDSTYLSLI 619
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TLI YG G+ V +EM +IG P ++TYN L+ + + + + +
Sbjct: 541 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 600
Query: 167 KEMTDNGLSPNWNTYASLLRAYG 189
KEM + G+SP+ +TY SL+ G
Sbjct: 601 KEMVNKGISPDDSTYLSLIEGMG 623
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 127/298 (42%), Gaps = 33/298 (11%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+Y EM + + + T+N +++ + + + + + M G PN +Y +++ Y
Sbjct: 214 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 273
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
E + M+ KG++ Y +L++ G +EA +F+ M P++
Sbjct: 274 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI-GLVPNA 332
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRA 306
T++++I +G + A + +EM++ G P++ L+ G+ DD+++
Sbjct: 333 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 392
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQ---------TPKEELGKLVECVEKSNSKLGYVVKL 357
+ + GI PD L+N ++ E L K +E + + L YV+
Sbjct: 393 MRK---KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS- 448
Query: 358 LLEEQDIEGDFKKEATELFNSI-----SKDVKKAYCNCLID-LCVNLNLLENACKLLE 409
+ KEA +LF I S DV N ++D C N N +E A LL+
Sbjct: 449 -------RRNRMKEADDLFEKILDQGVSPDV--IMFNAMVDGHCANGN-VERAFMLLK 496
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+R R ++ + MKEKG+ + N +L++ + + A+ ++ +M
Sbjct: 163 LVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLR 222
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+TF+ M+ + GK+ +A M GF+PN+ ++I Y +
Sbjct: 223 -ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 281
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
R L+ + GI PD G L++ M + + E
Sbjct: 282 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 314
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 7/270 (2%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
++ R+D F+TL+ G + E M +GV+P++I+YN L+D R
Sbjct: 516 DQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTD 575
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + M GL PN TY +LL Y +AR +D S+ REM G V YNT+L
Sbjct: 576 EAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTIL 635
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G EA E++ +M +S Q D +T++ ++ V EA MF + G
Sbjct: 636 HGLFQTGRFSEAKELYLNMINSRT-QWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGL 694
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGK 339
+ ++ +I K + +D + + G+ PD + +C N++ + EELG
Sbjct: 695 QLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGV 754
Query: 340 LVECVEKS----NSK-LGYVVKLLLEEQDI 364
L +E++ NS+ L +V+ L DI
Sbjct: 755 LFSAMEENGTAPNSRMLNALVRRFLHRGDI 784
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 163/344 (47%), Gaps = 34/344 (9%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEM---KAIGVKP 141
A +L E + R ++ PN +++TL+K + + L + M + + P
Sbjct: 243 AKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPP 302
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
++++YN +++ R + + ++ +M D G+ P+ TY +++ +A+ + +V+
Sbjct: 303 DVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVF 362
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
++M +KG++ S YN L+ G E + E+M S+ + +PD + ++ ++
Sbjct: 363 QQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEM-STHDLEPDCFIYALLLDYLCK 421
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ +EA +F+ ++ G +P+ + D+ V +++ + G++P+
Sbjct: 422 NGRCTEARNIFDSVIRKGIKPDAMI--------------DEAVCIFDKMRQQGLSPNVVN 467
Query: 322 CGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
G L++ + + LG++ + + K N + V L E+ ++K +F + +
Sbjct: 468 YGALIDALCK-----LGRVDDAILKFNQMINEVYGLCTVEK-----WEKAEELVFEMLDQ 517
Query: 382 DVK---KAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQS 422
++ + + DLC ++E A +L+EL L + V D+ S
Sbjct: 518 GIRLDVVVFNTLMCDLCREGRVME-AQRLIELMLRVGVRPDVIS 560
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE------IFEDM 239
RA + D L ++ + SVT +N LL + E +F+ M
Sbjct: 124 RAQSGSLASHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRM 183
Query: 240 --KSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
+ S+ PD T+S +I C CR G++ A+F +L+ G+ N V L++
Sbjct: 184 VRECSDKVAPDRCTYSILIG-CFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCD 242
Query: 297 AQRTDDVVRALN-RLPELGITPD 318
A+R D+ L R+PE G TP+
Sbjct: 243 AKRLDEATNILLWRMPEFGCTPN 265
>gi|298706415|emb|CBJ29411.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 7/241 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR-PW-QVKT 164
D +++T I G AG + + EM +G++P ++TYN+ + + R W Q
Sbjct: 115 DAISYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVA 174
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ K M+ G++P+ TY SL+ A G+ + LSV + MK++G+ + Y+ ++ C
Sbjct: 175 LVKHMSLAGVTPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDIIGYSAAISACG 234
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G + + + + KS PD +++ +T C+ + +A + EML AG P+
Sbjct: 235 EAGQWEYSVGLLAEAKSL-GITPDLVAYTAAVTACADANQRDKATFLLKEMLSAGIRPDA 293
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL----NVMTQTPKEELGKL 340
TSLI G + V L +P++G + L+ N +EE G L
Sbjct: 294 AAFTSLIAALGHDGQWTQAVEILESMPKMGAPRNAMVYNALITSWANAEVAKGEEEGGAL 353
Query: 341 V 341
+
Sbjct: 354 L 354
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+++ ++D A+S I G + + + +M +GV+PN+I+ N + G A +
Sbjct: 39 DDEIKLDVVAYSAAITACANGGRWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQ 98
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+I + M+ GLSP+ +Y + + A G A E + EM G++ +V YN+ +
Sbjct: 99 HALSILRGMSKAGLSPDAISYNTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAI 158
Query: 221 AMCADVGYTD--EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
A A G +A + + M S PDS T++S+I C G+ +A ++ M +
Sbjct: 159 AAIARGGGGQWRQAVALVKHM-SLAGVTPDSITYNSLIVACGKGGQWKQALSVLKGMKKQ 217
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G ++ ++ I G+A + + V L LGITPD
Sbjct: 218 GLSCDIIGYSAAISACGEAGQWEYSVGLLAEAKSLGITPD 257
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN S IK +G AG + L++ M G+ P+ I+YN + +G A + Q +
Sbjct: 77 VRPNVISCNAAIKAWGEAGQWQHALSILRGMSKAGLSPDAISYNTAISALGVAGQSEQAQ 136
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGE--DTLSVYREMKEKGMQLSVTLYNTLLA 221
+ EM+ G+ P TY S + A R G+ +++ + M G+ YN+L+
Sbjct: 137 ELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVKHMSLAGVTPDSITYNSLIV 196
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
C G +A + + MK + D +S+ I+ C G+ + + E G
Sbjct: 197 ACGKGGQWKQALSVLKGMKK-QGLSCDIIGYSAAISACGEAGQWEYSVGLLAEAKSLGIT 255
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+L T+ + A + D L + GI PD
Sbjct: 256 PDLVAYTAAVTACADANQRDKATFLLKEMLSAGIRPD 292
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M G++ SV Y+ L CA G EA + +M+ + + D +S+ IT C+ G
Sbjct: 1 MPGLGIRPSVESYSIGLTACAKGGRWQEALVLLREMEEDDEIKLDVVAYSAAITACANGG 60
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EA A+ ++M G PN+ + I+ +G+A + + L + + G++PD
Sbjct: 61 RWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALSILRGMSKAGLSPD 115
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM-TDNGLSPNWNTYASLLRAYGRAR 192
M +G++P++ +Y+ L + R + + +EM D+ + + Y++ + A
Sbjct: 1 MPGLGIRPSVESYSIGLTACAKGGRWQEALVLLREMEEDDEIKLDVVAYSAAITACANGG 60
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ +++ +M G++ +V N + + G A I M S PD+ ++
Sbjct: 61 RWQEAVAILSDMPNVGVRPNVISCNAAIKAWGEAGQWQHALSILRGM-SKAGLSPDAISY 119
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY--GKAQRTDDVVRALNRL 310
++ I+ G+ +A+ + +EM G EP + S I G + V + +
Sbjct: 120 NTAISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVKHM 179
Query: 311 PELGITPD 318
G+TPD
Sbjct: 180 SLAGVTPD 187
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 109/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+ + EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LS + EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSXFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 10/288 (3%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++WR PN +++LI + AG + +N+ ++M+ + P+ TYNN+++ G A
Sbjct: 180 QEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNW 239
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L A+ ++ + MK + N +
Sbjct: 240 KKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIV 299
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +G EA E+F M+ C PD T++S++ S G+ +A+F+ M+
Sbjct: 300 IHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAE 359
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G PN+ +L+ Y + + L + G+ PD LLN ++ + E
Sbjct: 360 GVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKA 419
Query: 339 KLVECVEKSNS----KLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
+ V + N+ K+ Y L++ G KEA L + + +D
Sbjct: 420 REVFNEMRKNACKPNKVSY--NALIDAYGSAGML-KEAISLLHEMEQD 464
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 43/286 (15%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++++L+ YG + + V+ EM+ KPN ++YN L+D G A + +
Sbjct: 397 RPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAIS 456
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ EM +G+ P+ + ++LL A GR + + K +G+QL+ YN+ +
Sbjct: 457 LLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYL 516
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT--------------------------- 257
+G +A ++ M++ N +PD+ T++ +I+
Sbjct: 517 SLGDYKKALVLYTSMRAG-NVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTK 575
Query: 258 ------ICSC--RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRA 306
ICS +GK++EA + FN M E G P++ T+LI+ Y G +R D+ +
Sbjct: 576 EVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFK- 634
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKL 351
+ G PD C L+ + + + E + +L+E +++ +L
Sbjct: 635 --EMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQL 678
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R D +++++ Y G + C V++ M A GV+PN+++YN LL
Sbjct: 320 RERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHG 379
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ +K + NGL P+ +Y SLL AYGR+ E V+ EM++ + + YN
Sbjct: 380 MHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYN 439
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G EA + +M+ + QPD + S+++T C ++++ + +
Sbjct: 440 ALIDAYGSAGMLKEAISLLHEME-QDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKS 498
Query: 278 AGFEPNLFVLTSLIQCY 294
G + N S I Y
Sbjct: 499 RGIQLNTVAYNSGIGSY 515
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 1/158 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A++ +++ A+++ I Y + G++ L +Y M+A VKP+ +TYN L+ + R
Sbjct: 496 AKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGR 555
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ +++M D + Y+S++ +Y + + S + MKE G V Y T
Sbjct: 556 YVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTT 615
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
L+ +D G A+++F++M+++ QPD+ SS++
Sbjct: 616 LIKAYSDDGSWRRAWDLFKEMENN-GTQPDAIVCSSLM 652
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLIK Y G++ ++++EM+ G +P+ I ++L++ + + +P +V +
Sbjct: 609 DVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLI 668
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + N Y ++ + R + + + +S N +L
Sbjct: 669 EFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLDSSLSSISFGTLNHILNFLGKC 728
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T+ ++F M +S + S T++ ++ GK + + M +AG P L++
Sbjct: 729 GRTESMMKLFYKMVTSCSTVGLS-TYTILLRNLLIVGKWRKYVEVLQWMEDAGVCPTLYM 787
Query: 287 LTSLI 291
S++
Sbjct: 788 YQSVL 792
>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 426
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 14/197 (7%)
Query: 173 GLSPNWN------TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
GL W+ TY LL+A+ R+R + +VY EM KG QL + YN LL A
Sbjct: 228 GLIKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKD 287
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D ++++F+DMK ++C PD +T++ MI + G+ E+ A+F EML G PNL
Sbjct: 288 EQLDRSYKVFKDMKL-KHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIA 346
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
++IQ K+ D + + + P++ +LNV+ + +LG+L E +E
Sbjct: 347 YNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVL--VAEGQLGRLDEVLEV 404
Query: 347 SN-----SKLGYVVKLL 358
SN S Y+V+ L
Sbjct: 405 SNKFINKSIYAYLVRTL 421
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +A+ ++++ G + + ++ G+ + + YN +L T+G+ K+ + +Y
Sbjct: 445 DRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLY 504
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M +G P+ TY L+ + GR ++ + V+ E++ + + YN+L+
Sbjct: 505 EKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKN 564
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA F +M+ + PD T+S++I KV A ++F+ M+ G PN+
Sbjct: 565 GDVDEAHMRFLEMQ-DKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVT 623
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C +A RT + V +L E G+TPD
Sbjct: 624 YNILLDCLERAGRTAETVDLYAKLREQGLTPD 655
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW + NA++ L++ + + + D NVY EM + G + ++ YN LLD + + ++
Sbjct: 231 KKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQL 290
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++K+M +P+ TY ++R G+ E++L+++ EM KG ++ YNT+
Sbjct: 291 DRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTM 350
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + G D+A +F +M + NC+P+ +T+S ++ + G++ +E+LE
Sbjct: 351 IQALSKSGMVDKAILLFCNMIKN-NCRPNEFTYSIILNVLVAEGQLGR----LDEVLEV 404
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI G G + V+EE+++ KP++I+YN+L++ +G+ + +
Sbjct: 515 DIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRF 574
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D GL+P+ TY++L+ +G+ E S++ M +G ++ YN LL
Sbjct: 575 LEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERA 634
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFS 253
G T E +++ ++ + PDS T++
Sbjct: 635 GRTAETVDLYAKLR-EQGLTPDSITYA 660
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 116/266 (43%), Gaps = 35/266 (13%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM------GRAKRP 159
PN A++T+I+ +G D + ++ M +PN TY+ +L+ + GR
Sbjct: 342 PNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEV 401
Query: 160 WQV------KTIY----KEMTDNGLSPN--------W--------NTYASLLRAYGRARY 193
+V K+IY + ++ G S W + Y S+L + R
Sbjct: 402 LEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGK 461
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ + + ++ EKG+ +YNT+L+ + +++E MK + PD +T++
Sbjct: 462 TVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQ-DGPFPDIFTYN 520
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I+ GKV EA +F E+ + +P++ SLI C GK D+ + +
Sbjct: 521 ILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDK 580
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGK 339
G+ PD L+ +T K E+ +
Sbjct: 581 GLNPDVVTYSTLIECFGKTDKVEMAR 606
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 22/298 (7%)
Query: 30 DDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNP----QYPHGKTGSSPK----SYIWVN 81
DD S S + Q SVSL ++S K +P Q+ H + PK ++ +
Sbjct: 116 DDRFSDLS-SYFQSLSVSLTPAEASEILKSLNSPDLALQFFHRCSSLCPKFRHDAFTYSR 174
Query: 82 PKSPRASKLKEKSYD------TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK 135
+ K D ++ ++ R + + LIK++ + + + C + +K
Sbjct: 175 ILLMLSHSSSSKRIDQVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGL---IK 231
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
++ N TY LL R++ + +Y EM G + Y LL A + +
Sbjct: 232 KWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLD 291
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ V+++MK K Y ++ M +G +E+ +FE+M ++ C P+ +++M
Sbjct: 292 RSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEML-TKGCTPNLIAYNTM 350
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLF---VLTSLIQCYGKAQRTDDVVRALNRL 310
I S G V +A +F M++ PN F ++ +++ G+ R D+V+ N+
Sbjct: 351 IQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKF 408
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI+ +G + ++++ M G PN++TYN LLD + RA R + +Y
Sbjct: 585 DVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLY 644
Query: 167 KEMTDNGLSPNWNTYASLLR 186
++ + GL+P+ TYA L R
Sbjct: 645 AKLREQGLTPDSITYAILDR 664
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 232 TLEHEKANNLIQEMQ-HRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQV 290
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G P+ Y +++ +G A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 120/239 (50%), Gaps = 3/239 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P +++LI+ + G + +++EM G +P++ N +D + +A + + I+
Sbjct: 495 NPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIF 554
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+++ G P+ +Y+ L+ +A +T S++ MK++G L YN ++
Sbjct: 555 EDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKS 614
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A+E+ E+MK + P T+ S+I + ++ EA +F E G E N+ V
Sbjct: 615 GKLDKAYEVLEEMK-VKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIV 673
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+SLI +GK R D+ L + + G+TP+ L++ + + EE+ + + C +
Sbjct: 674 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKA--EEINEALICFQ 730
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 122/260 (46%), Gaps = 4/260 (1%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRA-RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
+SY + +A + +E S A + + + +D A++ ++ + +G D V EE
Sbjct: 567 RSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEE 626
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK V P + TY +++D + + R + +++E G+ N Y+SL+ +G+
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ + EM +KG+ +V +N+L+ +EA F+ MK + C P+++T+S
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK-CSPNTYTYS 745
Query: 254 SMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+I +C + K ++A + EM + G PN+ T++I K D R
Sbjct: 746 ILINGLCRVQ-KYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKA 804
Query: 313 LGITPDDRFCGCLLNVMTQT 332
G TPD L+ M+
Sbjct: 805 NGGTPDAASFNALIEGMSHA 824
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ I +G AGN D + E+K+ G+KP+ ++Y +++ + +A R + + ++ +M
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQME 314
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
P Y +++ YG A E+ + ++KE+G SV +N++L D
Sbjct: 315 TERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVD 374
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +FE MK ++ +P+S T++ +I + GKV EA + +EM AG PNL + +
Sbjct: 375 EALTLFEAMK--KDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIM 432
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ KA++ + + G P+
Sbjct: 433 VDRLCKAKKFEPAYEMFETASQRGCNPN 460
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 102/200 (51%), Gaps = 1/200 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+++ ++ +S+LI +G G D + EEM G+ PN+ T+N+L+D + +A+
Sbjct: 662 AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEE 721
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M + SPN TY+ L+ R + ++EM+++G+ +V Y T
Sbjct: 722 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 781
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++A A VG +A +FE K++ PD+ +F+++I S + EA +F E
Sbjct: 782 MIAGLAKVGNITDACSLFERFKANGG-TPDAASFNALIEGMSHANRAIEAYHVFEETRLK 840
Query: 279 GFEPNLFVLTSLIQCYGKAQ 298
G N+ SL+ KA+
Sbjct: 841 GCRINVKACISLLDALNKAE 860
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
D V M+ + +P Y L+ M A++P + + ++M + G + +
Sbjct: 163 LDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTT 222
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+RA R E L++ E+K ++ + LYN + G D A++ F ++K S+
Sbjct: 223 LVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELK-SQ 281
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+PD +++SMI + G++SEAE +F +M P + ++I YG A + ++
Sbjct: 282 GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENA 341
Query: 304 VRALNRLPELGITP 317
+ L++L E G P
Sbjct: 342 YKLLDQLKERGCIP 355
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 3/245 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++Y R E + PN + ++ A F+ ++E G PN +TY +L
Sbjct: 408 EEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSL 467
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D +G+ +++ M D G + N Y SL+R + ED +++EM +G
Sbjct: 468 IDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGC 527
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
Q +TL NT + G ++ IFED+K PD ++S +I + G+ E
Sbjct: 528 QPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY-GFLPDVRSYSILIHGLTKAGQARETS 586
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
++F+ M + GF + +++ + K+ + D L + + P G +++ +
Sbjct: 587 SIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646
Query: 330 TQTPK 334
+ +
Sbjct: 647 AKIDR 651
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 117/246 (47%), Gaps = 5/246 (2%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN+ ++ +I + AG + + +EM+ G+ PN++T N ++D + +AK+
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++ + G +PN TY SL+ G+ +D ++ M + G + +Y +L+
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++ +IF++M + CQPD ++ + G V + A+F ++ GF P++
Sbjct: 508 MHGRKEDGHKIFKEM-NRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDV 566
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ LI KA + + + + + G D R +++ ++ K L K E +
Sbjct: 567 RSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK--LDKAYEVL 624
Query: 345 EKSNSK 350
E+ K
Sbjct: 625 EEMKVK 630
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 95/205 (46%), Gaps = 1/205 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R K+R +A++ LI A + L + +M+ +G + + + L+ + R R
Sbjct: 174 RRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRV 233
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ E+ + L P+ Y + +G+A + + E+K +G++ Y ++
Sbjct: 234 EGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSM 293
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G EA E+F M+ +E P ++ +++MI G+ A + +++ E G
Sbjct: 294 IWVLCKAGRLSEAEELFGQME-TERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERG 352
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVV 304
P++ S++ C GK ++ D+ +
Sbjct: 353 CIPSVVSFNSILTCLGKKRKVDEAL 377
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T R+ I+ + LI Y AG D +Y+EM+ ++PN Y ++ T+ R
Sbjct: 341 TLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMI-TIYRD 399
Query: 157 KRPWQVKT-IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
WQ + +EM G++P+ + Y ++ +GR R E + +M++ G++ V
Sbjct: 400 TGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVS 459
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+N+L+ C G EA +++ M ++ C P + TF+ +I + ++ M EM
Sbjct: 460 WNSLIDACCKAGQPLEARKLYYKM-VNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEM 518
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK- 334
G PN+ T+L+ Y +A+ D V L + E G+ P L N Q
Sbjct: 519 RSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMC 578
Query: 335 EELGKLVECVEKSNSKLGY-VVKLLLEEQDIEGDFKKEATELFNSISK 381
E+ +++ +EK N ++ ++ LL+ + G +EA +F I +
Sbjct: 579 EQTLHVLQTMEKENIEINLAMLNLLINAFSMAGR-SQEAFAVFEYIKE 625
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P+ S +LI AG +Y +M G P T+N ++ +G KR V
Sbjct: 453 IEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVN 512
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM G+ PN TY +L+ Y +AR +D + + MKE GM S T Y+ L
Sbjct: 513 EMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAY 572
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A +G ++ + + M+ EN + + + +I S G+ EA A+F + EAG +
Sbjct: 573 AQLGMCEQTLHVLQTMEK-ENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTAD 631
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
T+L++ +A++ D+V + + + G PD +
Sbjct: 632 KITYTTLMKALIRAEKLDEVSGVFDEMIKAGCRPDGK 668
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 108/217 (49%), Gaps = 1/217 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E ++D ++ LI G A + + E+++A G+ + +Y +L+ ++G+ R +
Sbjct: 241 EGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAE 300
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ + +EM GL PN Y +LL Y R + +V +++ GM ++ Y L+
Sbjct: 301 AEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLID 360
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A G D ++++M+ + +P+++ ++ MITI G+ + + EM +AG
Sbjct: 361 AYARAGLMDRLEALYQEMRDC-DIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVT 419
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+ V +I +G+ ++ + A ++ + GI PD
Sbjct: 420 PDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPD 456
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ +L+ G G + EEMK G++PN+ YN LL R + Q+ T+
Sbjct: 281 DRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVK 340
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ D G+S N TY L+ AY RA + ++Y+EM++ ++ + +Y ++ + D
Sbjct: 341 TLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDT 400
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + ++ +M+ + PD+ ++ +I ++ +A F +M + G EP++
Sbjct: 401 GQWQKGVKLLREMQQA-GVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVS 459
Query: 287 LTSLIQCYGKA 297
SLI KA
Sbjct: 460 WNSLIDACCKA 470
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 106/223 (47%), Gaps = 2/223 (0%)
Query: 118 YGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPN 177
+G + G +++EM+A GV+ + YN+L+ G+A +P + +++ +GL +
Sbjct: 223 HGVVDIYTG-FRLFQEMQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVAD 281
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFE 237
++Y SL+ + G+ + ++ EMK G++ ++ YNTLL + G + + +
Sbjct: 282 RDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQ-IDTVK 340
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
+ + T+ +I + G + EA++ EM + PN ++ +I Y
Sbjct: 341 TLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDT 400
Query: 298 QRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+ V+ L + + G+TPD ++N +T + E ++
Sbjct: 401 GQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARI 443
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E I+ + LI + AG V+E +K G+ + ITY L+ + RA++ +
Sbjct: 591 ENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDE 650
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
V ++ EM G P+ L A+ R+ E LS
Sbjct: 651 VSGVFDEMIKAGCRPDGKAKDMLRSAF---RFKERELS 685
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y F L+++ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + + +
Sbjct: 233 LEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA IF +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSIFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++P+ +Y++LL Y + + LS++ EM+E
Sbjct: 103 SEMKTAGVTPDTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG P+ ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
ID + ++T++ + + E++ A G P + TYN LL+ + + R + +
Sbjct: 32 IDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDL 91
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++ DNG +P+ TY SL+ G+ + + +++EM +G+ L Y L+
Sbjct: 92 LRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 151
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A +++ M +S+ C PD T S+MI G++ A +F M G PN
Sbjct: 152 AGKIPQASSVYKTM-TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEV 210
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V ++LI KA++ D + L ++ + TPD
Sbjct: 211 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 243
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 9/281 (3%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LI+ AG +VY+ M + G P+++T + ++D + +A R I
Sbjct: 137 LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRI 196
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+K M GL+PN Y++L+ +AR + L + +MK+ YN L+
Sbjct: 197 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 256
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A F++M + C+PD +T++ +I+ G A +F++M + PN+
Sbjct: 257 SGDVAAARAFFDEMLEA-GCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVV 315
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLVECV 344
+LI K ++ + E G PD L++ + ++ K E G L + +
Sbjct: 316 TYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 375
Query: 345 EKS---NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
E+S NS+ + L + + EA LFN+I K+
Sbjct: 376 ERSGVANSQ----TRTRLIFHLCKANRVDEAVSLFNAIRKE 412
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
FS LI AG ++ +E G ++ TY ++D + + K+ + + +++T
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
NG +P TY +LL + E+ + + R++ + G V Y +L+ +
Sbjct: 62 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+++F++M +S D+ ++++I GK+ +A +++ M G P++ L+++
Sbjct: 122 EAYKLFKEM-ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
I KA R VR + G+ P++ L++ + + K +
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 226
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 124/285 (43%), Gaps = 15/285 (5%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T++ L++ + +A Q ++ +E T NG + + +TY +++ + + ++ +++ ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
G ++ YN LL +G +EA ++ + C PD T++S+I + +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI-VDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
EA +F EM G + T+LI+ +A + + G PD
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 325 LLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVK 384
+++ + + + +G V + KS G ++ I G K + + +K
Sbjct: 180 MIDGLCKAGR--IGAAVR-IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 236
Query: 385 KAYC-------NCLID-LCVNLNLLENAC---KLLELGLTLEVYT 418
KA+C N LID LC + ++ ++LE G +VYT
Sbjct: 237 KAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYT 281
>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 426
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ + N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHV 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILN 398
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIDQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHVKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 26/299 (8%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+F+TLI Y +GN D + M V P++ TY+ L++ + + + ++ EM
Sbjct: 262 SFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM 321
Query: 170 TDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
D GL PN T+ +L+ + GRA G + +Y++M KG++ V YNTL+ V
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLG---MEIYQQMLRKGVKPDVITYNTLINGLCKV 378
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++ +M + +PD +T++ +I C G + A + EM++ G E +
Sbjct: 379 GDLREAKKLVIEM-TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
T+LI + + + + R L + E GI PDD +++ + K
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK--------------K 483
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEAT--ELFNSISKDVKKAYCNCLIDLCVNLNLLEN 403
+ K G+ LL+E +G T L N + K + N L+D +NL ++ +
Sbjct: 484 GDVKTGFK---LLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPD 539
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+TLI + G D + +Y++M GVKP++ITYN L++ + + + K +
Sbjct: 328 PNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKL 387
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EMT GL P+ TY L+ + E L + +EM ++G++L + L++
Sbjct: 388 VIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCR 447
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA +M + +PD T++ +I +G V + EM G P +
Sbjct: 448 EGQVIEAERTLREMLEA-GIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVV 506
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
L+ K + + L+ + LG+ PDD
Sbjct: 507 TYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDD 540
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 105 RIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R+ P+ F S LI G D ++ EM G+ PN +T+ L++ R
Sbjct: 290 RVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLG 349
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
IY++M G+ P+ TY +L+ + + + EM ++G++ Y L+
Sbjct: 350 MEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C G + A EI ++M E + D+ F+++I+ G+V EAE EMLEAG +P
Sbjct: 410 CCKEGDLESALEIRKEM-VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKP 468
Query: 283 NLFVLTSLIQCYGK 296
+ T +I + K
Sbjct: 469 DDATYTMVIHGFCK 482
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 1/177 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI G+ + EM G+KP+ TY L+D + I
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM G+ + + +L+ + R + REM E G++ Y ++
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKK 483
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G F++ ++M+ + P T++ ++ +G++ A + + ML G P+
Sbjct: 484 GDVKTGFKLLKEMQCDGHV-PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPD 539
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 107/272 (39%), Gaps = 16/272 (5%)
Query: 56 PTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPNAFS- 112
PT H +P ++ I V+P P S LK S + ++P++ S
Sbjct: 30 PTSHCHDPIL------TTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSP 83
Query: 113 ----TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT-YNNLLDTMGRAKRPWQVKTIYK 167
+ K T +F ++ Y M M++ +LL + K +++
Sbjct: 84 PSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFT 143
Query: 168 EMTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + G + ++ L+ AY + Y D + +R +++ +Q+ L +
Sbjct: 144 SVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKL 203
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
T A+ +E++ PD F+ ++ K++EA+ +F E+ + G P +
Sbjct: 204 NLTSPAWAFYEEILDC-GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVS 262
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI Y K+ D R + E + PD
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPD 294
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 106 IDPNAFSTLIKLYGTA--GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ F+ + + G G+ + L + +EM G++ + + + L+ R + + +
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+EM + G+ P+ TY ++ + + + + +EM+ G V YN LL
Sbjct: 456 RTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGL 515
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G A + + M + PD T++ ++
Sbjct: 516 CKQGQMKNANMLLDAMLNL-GVVPDDITYNILL 547
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 119/241 (49%), Gaps = 7/241 (2%)
Query: 107 DPNAFSTLIK-LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D +++T+I L D +++++M G+ P+++TYN+++ + +A+ + +
Sbjct: 201 DVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVV 260
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M NG PN T+ SLL Y + D + V++ M G++ V YNTL+
Sbjct: 261 LVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCK 320
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + EA +IF+ M + +P+S T+ +++ + G + + + + M+ G +P+ +
Sbjct: 321 NGRSMEARKIFDSMVKRGH-KPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHY 379
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-----EELGKL 340
+ LI Y K + DD + +++ G+ PD G +++ + K + G+L
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRL 439
Query: 341 V 341
+
Sbjct: 440 I 440
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+D R + R D ++TLI Y G D + E M GVKPN +TYN +++
Sbjct: 506 FDLMVRVDVQR-DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYC 564
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+ R +++++M G++P TY+++L+ +AR +Y M + G++ +
Sbjct: 565 KNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIG 624
Query: 215 LYN-TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
YN LL +C + TD+A IF+++ + ++ TF+ MI G+ EA+ +F
Sbjct: 625 TYNIILLGLCQN-NCTDDALRIFQNLYLID-FHLENRTFNIMIDALLKGGRHDEAKDLFA 682
Query: 274 EMLEAGFEPNL----FVLTSLIQ 292
+L G PN+ ++ SLI+
Sbjct: 683 SLLARGLVPNVVTYWLMMKSLIE 705
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 94/205 (45%), Gaps = 3/205 (1%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
++ R + D + ++ G D + + + + G+ P+ + + NL+ + A
Sbjct: 402 SKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLC-A 460
Query: 157 KRPW-QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ W + + + EM G+ PN + +LL + +++ M +Q V
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVIT 520
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
YNTL+ G DEA ++ E M + +P+ T+++MI G++ +A ++F +M
Sbjct: 521 YNTLIDGYCLHGKVDEAAKLLEGM-VLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQM 579
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRT 300
G P + ++++Q +A+RT
Sbjct: 580 ASKGVNPGIVTYSTILQGLFQARRT 604
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY-GRARYGEDT 197
V PN+ITY+ ++D R + +G + T++ LL+A + R E
Sbjct: 87 VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ----PDSWTFS 253
R M G +V Y LL D + +A + M +++ + PD +++
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYN 206
Query: 254 SMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++I G+ + A +F++ML+ G P++ S+I KA+ D L R+ +
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266
Query: 313 LGITPD 318
G P+
Sbjct: 267 NGAMPN 272
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 103/242 (42%), Gaps = 1/242 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E D F LI +D + EM G+ PN I +N LL+ + +
Sbjct: 438 RLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEG 497
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ K I+ M + + TY +L+ Y ++ + M G++ + YN
Sbjct: 498 MVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYN 557
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
T++ G ++AF +F M +S+ P T+S+++ + + A+ ++ M++
Sbjct: 558 TMINGYCKNGRIEDAFSLFRQM-ASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIK 616
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
+G + ++ ++ + TDD +R L + ++R +++ + + + +
Sbjct: 617 SGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDE 676
Query: 338 GK 339
K
Sbjct: 677 AK 678
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 14/255 (5%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
GL + TY +++A+ R+R VY EM+ KG +L + YN LL A G D+A
Sbjct: 181 GLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQA 240
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
F++FEDMK ++C PD++T++ +I + G+ S+ + F+EM+ G NL ++I+
Sbjct: 241 FQVFEDMKQ-KHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIE 299
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEELGKLVECVEK--SNS 349
GK + D V+ L+++ E P+ L+++ T+ L ++++ + + S
Sbjct: 300 ALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRS 359
Query: 350 KLGYVVKLLLEEQDIEGDFKKEATELF----NSISKDVKKAYCNCLIDLCVNLNLLENAC 405
Y+VK L + EA +F NS K + A+ + L LC LE A
Sbjct: 360 IYSYLVKSL-----CKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLE-AI 413
Query: 406 KLLELGLTLEVYTDI 420
LL + + TD+
Sbjct: 414 DLLHMMPEKGIVTDV 428
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 121/237 (51%), Gaps = 2/237 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S L+K +G+ NV+ M K + + ++L+ + A++ + + M
Sbjct: 361 YSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMP 420
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ + Y + A G+ + +++ +MK G+ V YN +++ VG D
Sbjct: 421 EKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVD 480
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A E+FE M++S +C+PD T++S+I G + EA +F EM E G++P++F + L
Sbjct: 481 KASELFEVMEAS-SCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSIL 539
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK 346
I+C+GK+ + + + + G TP+ LL+ + + K EE KL E +++
Sbjct: 540 IECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQ 596
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P+ F+ +I YG G D ++E M+A KP+++TYN+L++ +G+ +
Sbjct: 459 IIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAH 518
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++KEM + G P+ TY+ L+ +G++ E S++ EM +G ++ YN LL
Sbjct: 519 MLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCL 578
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
G T+EA +++E MK + PDS T+S
Sbjct: 579 ERRGKTEEAHKLYETMK-QQGLIPDSITYS 607
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 103 KW--RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
KW R+ + +++ + + VYEEM+ G K ++ YN LLD + +A
Sbjct: 179 KWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVD 238
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q ++++M P+ TY L+R G+A LS + EM KG L++ +NT++
Sbjct: 239 QAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTII 298
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS----------------SMITICS---- 260
D+ + M ++ CQP+ +T+S ++ ICS
Sbjct: 299 EALGKNKMVDKVIFVLSKMVEND-CQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMN 357
Query: 261 -----------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
C+ G SEA +F M + + + S+++ A++T + + L+
Sbjct: 358 RSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLH 417
Query: 309 RLPELGITPD 318
+PE GI D
Sbjct: 418 MMPEKGIVTD 427
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
N++++MK G+ P++ TYN ++ + GR + +++ M + P+ TY SL+
Sbjct: 449 NLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCL 508
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ ++ +++EM+EKG V Y+ L+ + A +F++M SE C P+
Sbjct: 509 GKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEM-ISEGCTPN 567
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
T++ ++ RGK EA ++ M + G P+ + L + ++QRT
Sbjct: 568 IVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRT 619
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI G G+ D +++EM+ G P++ TY+ L++ G++ + +++
Sbjct: 497 DVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLF 556
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
EM G +PN TY LL R E+ +Y MK++G+ Y+ L
Sbjct: 557 DEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSIL 609
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 107 DPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ F S LI+ +G + + ++++EM + G PN++TYN LLD + R + +
Sbjct: 530 DPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHK 589
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+Y+ M GL P+ TY+ L R R++
Sbjct: 590 LYETMKQQGLIPDSITYSILERLESRSQ 617
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 152/310 (49%), Gaps = 21/310 (6%)
Query: 108 PNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ + GT AG D + + +EM G+ PN++TY ++D + + + +
Sbjct: 337 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDV 396
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M G+ N Y +L+ + + E L + EMK KGM+L V+LY TL+
Sbjct: 397 LSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCK 456
Query: 226 VGYTDEAFEIFEDMKSSENC--QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
V DEA + M ++C +P++ +++++ GK SEA A+ +++ ++G +PN
Sbjct: 457 VQKLDEAKSLLHKM---DDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPN 513
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV-- 341
+ +LI KA + + +++ ELG+ P+ + L++ + L K V
Sbjct: 514 VVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIG--SLSKAVHL 571
Query: 342 --ECVEKSNS--KLGY--VVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYC-NCLIDL 394
E V+K S K+ Y ++ +++ D++G F +A + + D+ YC C I
Sbjct: 572 MNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDL---YCYTCFISG 628
Query: 395 CVNLNLLENA 404
N+N+++ A
Sbjct: 629 FCNMNMMQEA 638
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 7/222 (3%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCL--NVYEEMKAIGVKPNMITYNNLLDTMGRA 156
AR + R+ PN + L A N G L ++E + A PN+ T+N ++D + +
Sbjct: 157 ARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCKQ 212
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + ++ M G SP+ TY SL+ YG+ E+ + EM++ G V Y
Sbjct: 213 GELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTY 272
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N L+ + G+ ++A+ F +MK + T S+ + G V EA +F +M
Sbjct: 273 NALINCFSKFGWIEKAYSYFGEMKRL-GVMANVVTLSTFVDAFCKEGLVREAMKLFAQMR 331
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G PN F TSL+ KA R DD + L+ + G+ P+
Sbjct: 332 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 373
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 8/208 (3%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ +I G ++ MKA+G P+++TYN+L+D G+ +V+ +
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
EM +G + + TY +L+ + + + E S + EMK G+ +V +T + A C
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G EA ++F M+ P+ +T++S++ G++ +A + +EM+ G PN+
Sbjct: 317 E-GLVREAMKLFAQMR-VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 374
Query: 285 FVLTSLIQCY---GKAQRTDDVVRALNR 309
T ++ GK DDV+ + R
Sbjct: 375 VTYTVMVDGLCKEGKVAVADDVLSLMER 402
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 79 WVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG 138
++N S RA L + +N+ +D + + TLI D ++ +M G
Sbjct: 420 FMNKNSERALDLLNE-----MKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCG 474
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
++PN + Y ++D +A + + + ++ D+GL PN TY +L+ +A + +
Sbjct: 475 LRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAI 534
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
S + +M+E G+ +V +Y TL+ +G +A + +M + D ++S+I
Sbjct: 535 SHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEM-VDKGMSLDKVVYTSLIDG 593
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+G + A A+ +M+E G + +L+ T I + + L+ + GITPD
Sbjct: 594 HMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPD 653
Query: 319 DRFCGCLL 326
CL+
Sbjct: 654 KTAYNCLI 661
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN + LI AG+ ++ +++M+ +G+ PN+ Y L+D + +
Sbjct: 510 LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAV 569
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM D G+S + Y SL+ + + + ++ +M E G+QL + Y ++
Sbjct: 570 HLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGF 629
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
++ EA + +M + PD ++ +I G + EA ++ NEM
Sbjct: 630 CNMNMMQEARGVLSEMIGT-GITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 95 YDTRARNEKWR---IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
Y+ + +K R +DPN ++TLI + G+ +++ EM G+ + + Y +L
Sbjct: 531 YEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSL 590
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D + + +M + GL + Y + + ++ V EM G+
Sbjct: 591 IDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 650
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
T YN L+ +G +EA + +M+S
Sbjct: 651 TPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682
>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 111/210 (52%), Gaps = 6/210 (2%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
KL KS++ R+ + PN F+ LI Y AG+ + +++YEEM+ + + N++TY
Sbjct: 180 KLALKSFNCMKRDALF---PNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTY 236
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
L+D + + +Y M ++ + PN Y +++ + + ++ + +M
Sbjct: 237 TALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLN 296
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+GM+L +T Y +++ +G EA EI EDM+ + PD F++M+ G++
Sbjct: 297 QGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGD-LVPDMMIFTTMMNAYFKSGRMK 355
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
A M+++++E GFEP++ L+++I K
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 145/321 (45%), Gaps = 16/321 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +ST I ++ +G L + MK + PN++T+ L+D +A V ++
Sbjct: 161 PNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSL 220
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y+EM +S N TY +L+ + + + +Y M E ++ + +Y T++
Sbjct: 221 YEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQ 280
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +D A + M ++ + D + +I+ GK+ EA + +M + P++
Sbjct: 281 RGDSDNAMKFLAKML-NQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMM 339
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ T+++ Y K+ R V ++L E G PD +++ + + + C E
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTE 399
Query: 346 KSNSKLGYV-VKLLLEEQDIEGDFKKEATELFNSISKDV----KKAYCNCLIDLCVNLNL 400
K+N + V + L +E+D E LF+ IS+ K Y + + LC NL
Sbjct: 400 KANDVMYTVLIDALCKEEDF-----IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454
Query: 401 LEN---ACKLLELGLTLEVYT 418
++ K+++ GL L+++
Sbjct: 455 VDAFKLKTKMVQEGLELDLFA 475
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 74 PKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNV 130
P S ++ +N R + + N+ R+D A+ +I G +
Sbjct: 266 PNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEI 325
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
E+M+ + P+M+ + +++ ++ R +Y ++ + G P+ ++++ G
Sbjct: 326 VEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID--GI 383
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDS 249
A+ G+ ++ EK + +Y L+ A+C + + E +F + S PD
Sbjct: 384 AKNGQLHEAISYFCTEKANDV---MYTVLIDALCKEEDFI-EVERLFSKI-SEAGLVPDK 438
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+ ++S I +G + +A + +M++ G E +LF T+LI + + +
Sbjct: 439 FMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDE 498
Query: 310 LPELGITPD 318
+ G+ PD
Sbjct: 499 MLRSGVCPD 507
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 34/224 (15%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT- 145
KLKE + + EK + P+ F+T++ Y +G +N+Y ++ G +P+++
Sbjct: 318 KLKEAT-EIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 146 -----------------------------YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSP 176
Y L+D + + + +V+ ++ ++++ GL P
Sbjct: 377 STMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVP 436
Query: 177 NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF 236
+ Y S + + D + +M ++G++L + Y TL+ G EA ++F
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVF 496
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
++M S C PDS F +I G ++ A + +M G
Sbjct: 497 DEMLRSGVC-PDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGL 539
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 117/278 (42%), Gaps = 39/278 (14%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD----------------- 151
++F++++ G +++ M G +P++I+YN+L+D
Sbjct: 57 SSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLES 116
Query: 152 ---TMGRAKRPWQVK-----------------TIYKEMTDNGLSPNWNTYASLLRAYGRA 191
+ G +P V +Y + SPN TY++ + + ++
Sbjct: 117 LRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKS 176
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ L + MK + +V + L+ G + ++E+M+ + T
Sbjct: 177 GELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRM-SLNVVT 235
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I +G++ A M+ MLE EPN V T++I + + +D+ ++ L ++
Sbjct: 236 YTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKML 295
Query: 312 ELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
G+ D G +++ + K +E ++VE +EK +
Sbjct: 296 NQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGD 333
>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 425
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+++ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA IF +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSIFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LS++ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN S TL+++YG A F ++++ M+ ++ N++TYN ++ G+
Sbjct: 177 KIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAXHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V + +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFSRMIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 173 WSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M + +P++ T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 233 LEHEKANNLIQEMHNX-GIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++++I ++G A F ++ EMK GV P+ ++Y+ LL ++ + +++
Sbjct: 78 DXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQKFLEALSVF 137
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + S + T ++ YG+ ++ ++ M++ G++ +V YNTLL + D
Sbjct: 138 AEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDA 197
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F M+ +N + + T+++M+ I + +A + EM G EPN
Sbjct: 198 ELFGEAIHLFRLMQ-RKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNXGIEPNAIT 256
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++I +GK + D +L G+ D
Sbjct: 257 YSTIISIWGKVGKLDRAAXLFQKLRSSGVEID 288
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+STLI +G G FD L+ + M+ V +++ Y+NL++ + + +I+ +
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 71
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G++P+ Y S++ +G+A+ ++ S+ EMK G+ Y+TLL M +
Sbjct: 72 RSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQKFL 131
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F +M+ + C D T + MI + EA+ +F M + G EPN+ +L
Sbjct: 132 EALSVFAEMREIK-CSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTL 190
Query: 291 IQCYGKAQ 298
++ YG A+
Sbjct: 191 LRVYGDAE 198
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP TY++L+ +G+ +D LS + M++ + + LY+ L+ + +
Sbjct: 2 ZRALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD ++SMI + EA ++ +EM AG P+ ++L
Sbjct: 62 KAISIFSRLKRS-GITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + Q+ + + + E+ + D C +++V Q
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQ 161
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 8/170 (4%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
Y+TL+ G D+A + M+ + D +S++I + S+A ++F+ +
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQXMEQ-DRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK- 334
+G P+ S+I +GKA+ + ++ + G+ PD LL + + K
Sbjct: 71 KRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTMYVENQKF 130
Query: 335 -EELGKLVECVEKSNSKLGYVVKLLLEEQDIEG--DFKKEATELFNSISK 381
E L E E S +++ D+ G D KEA +LF S+ K
Sbjct: 131 LEALSVFAEMREIKCSLDLTTCNIMI---DVYGQLDMAKEADKLFWSMRK 177
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 13/288 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI +G G D +++++EMK G+ P Y +L + R + +
Sbjct: 229 DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLV 288
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + G + TY L++ G+A E+ S++ M ++G + V L N L+ +
Sbjct: 289 QEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKA 348
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A ++FE+M+S + C P+ T++++I + + + SEA + +M E G P+ F
Sbjct: 349 GRLADAIKLFEEMESLQ-CTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSF 407
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ LI + K R + + L + E G P L+N + + + E E +
Sbjct: 408 TYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN--ELFQ 465
Query: 346 KSNSKLGY----VVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCN 389
+ GY V ++++ G EA +LFN ++KK CN
Sbjct: 466 ELRENCGYSSARVYAVMIKHLGKCGRL-SEAVDLFN----EMKKLGCN 508
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 22/274 (8%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTM 153
Y + R K + N ++++I + G+ + +Y EM G P+ +TY+ L+
Sbjct: 183 YQIKGR--KCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAF 240
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
G+ R +++ EM +NGL P Y ++L Y + E L + +EMKEKG L+V
Sbjct: 241 GKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTV 300
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
Y L+ G +EA+ IF +M E C+PD +++I + G++++A +F
Sbjct: 301 YTYTELIKGVGKAGKVEEAYSIFMNM-LKEGCKPDVVLINNLINLLGKAGRLADAIKLFE 359
Query: 274 EMLEAGFEPNLFVLTSLIQC-YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
EM PN+ ++I+ + R + ++ E G+ P L++ +T
Sbjct: 360 EMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKT 419
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEG 366
+ VEK+ LLLEE D +G
Sbjct: 420 NR---------VEKA--------LLLLEEMDEKG 436
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P++F S LI + + L + EEM G P Y +L++ +G+AKR
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++E+ +N + YA +++ G+ + + ++ EMK+ G V YN L++
Sbjct: 462 ELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
VG TDEA + M+ + C PD + + ++ + G A MF M + +P+
Sbjct: 522 VRVGMTDEAHSLLRTMEEN-GCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPD 580
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +++ C +A ++ + + + G D
Sbjct: 581 VVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYD 615
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 4/158 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ +IK G G ++++ EMK +G P++ YN L+ M R + ++ + M
Sbjct: 478 VYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTM 537
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+NG +P+ N++ +L + R + + ++ MK ++ V YNT+L + G
Sbjct: 538 EENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMF 597
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
+EA ++ ++M +S+ + D T+SS I GK+ E
Sbjct: 598 EEAAKLMKEM-NSKGFEYDLITYSS---ILEAVGKIDE 631
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 27/260 (10%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTL--IKLYGTAGNFDGCLNVYE 132
K + W P + +A ++ + D R E +ID + K G NF+ Y
Sbjct: 70 KIFKW-GPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTTY- 127
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+ + LD G W KTI +EM + + +++ G+A+
Sbjct: 128 -----------MALIHCLDEAGMLGEMW--KTI-QEMVRSTCVIGPADLSEIVKVLGKAK 173
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
LS++ ++K + + + YN+++ M G+ ++ E++ +M + +C PD+ T+
Sbjct: 174 MVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTY 233
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
S++I G+ A ++F+EM E G P + T+++ Y K R +
Sbjct: 234 SALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA--------- 284
Query: 313 LGITPDDRFCGCLLNVMTQT 332
LG+ + + GC L V T T
Sbjct: 285 LGLVQEMKEKGCALTVYTYT 304
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D N+ + ++ + G G + ++ MK +KP++++YN +L + RA + +
Sbjct: 545 DLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR 190
KEM G + TY+S+L A G+
Sbjct: 605 KEMNSKGFEYDLITYSSILEAVGK 628
>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 426
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYXKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA IF +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSIFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 109/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+++ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYXKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LS++ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SXGVDID 288
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYX 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 3/229 (1%)
Query: 88 SKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
++ EK+ + R + E+ R + F+ +I +YG A + V+ EMK+IG KPN+ T
Sbjct: 60 ARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICT 119
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L++ R + + +++EM G P+ Y +L+ AY RA + ++ M+
Sbjct: 120 YTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQ 179
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
G + YN L+ G ++A +FE++K P + ++ + G
Sbjct: 180 HMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELK-QRGMSPTMKSHMLLLAAHARSGNA 238
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+ E + ++ ++G P+ F L +++ Y +A R DD+ R + G
Sbjct: 239 TRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG 287
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L++ Y AG+ V EM+ G+ PN YN LD + +A+ + +Y+
Sbjct: 13 DTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQR 72
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M N T+ ++ YG+A+ ++ V+ EMK G + ++ Y L+ A G
Sbjct: 73 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGL 132
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+FE+M+ + + +PD + +++++ S G A +F+ M G EP+
Sbjct: 133 CEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYN 191
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ YG+A +D L + G++P
Sbjct: 192 ILVDAYGRAGLHEDAEAVFEELKQRGMSP 220
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ VY+ MK + N T+ +++ G+AK+P ++ EM G PN TY +L+ A
Sbjct: 67 VEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNA 126
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R E V+ EM++ G + V YN L+ + G A EIF M+ C+P
Sbjct: 127 FAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM-GCEP 185
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVV 304
D +++ ++ G +AEA+F E+ + G P + L+ + G A R ++V+
Sbjct: 186 DRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVM 245
Query: 305 RALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK 346
L++ G+TPD +LN + + +++ +L +E+
Sbjct: 246 AQLHK---SGLTPDTFALNAMLNAYARAGRLDDMERLFAAMER 285
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 37/204 (18%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L+ YG AG + V+EE+K G+ P M ++ LL R+ + + +
Sbjct: 186 DRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVM 245
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ +GL+P+ ++L AY RA +D ++ M+ +G V YN +
Sbjct: 246 AQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRA 304
Query: 227 GYTDE-----------------------------------AFEIFEDMKSSENCQPDSWT 251
GY + E+M + C PD+ T
Sbjct: 305 GYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDA-GCYPDAGT 363
Query: 252 FSSMITICSCRGKVSEAEAMFNEM 275
++ CS +V + A+ M
Sbjct: 364 ARVLLAACSDERQVEQVTAIVRSM 387
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + TL+ Y G D L+++ EM G+KP+ I YN ++D + A R K
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EMT++G++ N TY+ +LR + R ++ + +++E++ +++ + NT++A
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++F + S P + T+S MIT G V EAE MF+ M AG EP+
Sbjct: 687 FQTRRVEEAKDLFASI-SRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745
Query: 284 LFVLTSLIQCYGKAQRTDDVVRA 306
+L +++ + + +++VRA
Sbjct: 746 SRLLNHVVR---ELLKKNEIVRA 765
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 146/310 (47%), Gaps = 24/310 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++T+I + G+ + ++++EM G+ P+++TY++++ + +A+ + +
Sbjct: 220 DVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFL 279
Query: 167 KEMTDNGLSP-NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M + G+ P NW TY +L+ Y ++ + V++EM+ + + V NTL+
Sbjct: 280 RQMVNKGVLPDNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++F+ M + + PD ++++ M+ + +G + + +F+ ML G P +
Sbjct: 339 YGKIKEARDVFDTM-AMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 397
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE-ELGKLVECV 344
LI+ Y D + N + + G+ P ++ MT +GK+ + +
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPH------VVTYMTVIAALCRIGKMDDAM 451
Query: 345 EKSNSKLG-------YVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
EK N + Y L++ G K A EL + I + + +D+
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK-AKELISEIMNNGMR------LDIVFF 504
Query: 398 LNLLENACKL 407
+++ N CKL
Sbjct: 505 GSIINNLCKL 514
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 129/307 (42%), Gaps = 18/307 (5%)
Query: 71 GSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G P Y + + S LK K + N R+D F ++I G
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
N+++ +G+ P+ + YN L+D + + ++ M G+ PN Y +L+
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + ++ LS++REM +KG++ S LYN ++ + G T A F +M S
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES-GIAM 639
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+S ++ EA +F E+ + ++ L ++I + +R ++
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699
Query: 308 NRLPELGITPDDRFCGCLLNVM-TQTPKEELGKLVECV---------EKSNSKLGYVVKL 357
+ G+ P C ++M T KE L + E + E + L +VV+
Sbjct: 700 ASISRSGLVP----CAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRE 755
Query: 358 LLEEQDI 364
LL++ +I
Sbjct: 756 LLKKNEI 762
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 120/274 (43%), Gaps = 2/274 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+ LI+ + T G+ + E+ G++ +++ + ++++ + + R + I+
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ GL P+ Y L+ Y E L V+ M G++ +V Y TL+ +
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 584
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DE +F +M + +P + ++ +I G+ A+ F+EM E+G N
Sbjct: 585 GRIDEGLSLFREM-LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 643
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
+ +++ K + D+ + L + + D ++ M QT + EE L +
Sbjct: 644 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 703
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
+S V ++ I+ +EA ++F+S+
Sbjct: 704 RSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSM 737
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P TY L+D RA RP + ++ GL + + LL+ + A+ ++ L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 199 SVY-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMI 256
+ E G V YN LL + G + +A ++ M + C PD ++++I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G V++A +F EM++ G P+L +S++ KA+ D L ++ G+
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 317 PDD 319
PD+
Sbjct: 289 PDN 291
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 149 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 208
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 209 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 268
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 269 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 323
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 324 AKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLN 370
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 84 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 143
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 144 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 203
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 204 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 262
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 263 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 296
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 15 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 74
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 75 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 134
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 135 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 193
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 194 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 253
Query: 312 ELGITPD 318
G+ D
Sbjct: 254 SSGVEID 260
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 58/129 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 278 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEAKDITVFERMIHLL 337
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E G S
Sbjct: 338 SKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 397
Query: 214 TLYNTLLAM 222
++ +L++
Sbjct: 398 EVHFQMLSL 406
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 120/232 (51%), Gaps = 13/232 (5%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K R +P+ ++ L++ + AG V++EMK G++PN+ TY+ ++D + R +
Sbjct: 248 KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ +M D+G +PN T+ +L+R + +A E L VY +MK+ G + YN L+
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 221 -AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
A C D + A ++ M + C+ ++ TF+++ + V+ A M+++M+EA
Sbjct: 368 EAHCRDENL-ENAVKVLNTM-IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
EPN L++ + ++ TD V++ + + + P+ FCG
Sbjct: 426 CEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 477
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 111/212 (52%), Gaps = 4/212 (1%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ ++ +I L G FD ++ + MK+ V+ ++ T+ L+ RA + +
Sbjct: 151 PHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFN 210
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M D G P+ ++ ++ R R + S + +K++ + V +Y L+ G
Sbjct: 211 RMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAG 269
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA ++F++MK + +P+ +T+S +I +C C G++S A +F +ML++G PN
Sbjct: 270 EISEAEKVFKEMKLA-GIEPNVYTYSIVIDALCRC-GQISRAHDVFADMLDSGCAPNAIT 327
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L++ + KA RT+ V++ N++ +LG PD
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 359
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 39/211 (18%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL---------------- 149
PNA F+ L++++ AG + L VY +MK +G +P+ ITYN L
Sbjct: 323 PNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKV 382
Query: 150 LDTMGRAKRPWQVKT-------------------IYKEMTDNGLSPNWNTYASLLRAYGR 190
L+TM + K T +Y +M + PN TY L+R +
Sbjct: 383 LNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVG 442
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
++ + L + +EM +K ++ +V Y L+ M +G+ + A+++F++M E C S
Sbjct: 443 SKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM-VEEKCLTPSL 501
Query: 251 TFSSMITICSCR-GKVSEAEAMFNEMLEAGF 280
+ M+ R G++ + E + +M++ G
Sbjct: 502 SLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K ++ + F+T+ + + +G +Y +M +PN +TYN L+ +K
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLL 220
V + KEM D + PN NTY L+ + + + +++EM +EK + S++LY +L
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508
Query: 221 AMCADVGYTDEAFEIFEDM 239
A G + E+ E M
Sbjct: 509 AQLRRAGQLKKHEELVEKM 527
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 124/276 (44%), Gaps = 7/276 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A +K ++ F +++ Y A D + + M V PN+ +N LL + ++
Sbjct: 103 AMRKKGMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNN 162
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + I+ M P+ +Y+ LL +G+A V+REM E G V Y
Sbjct: 163 VRKAQEIFDAMKGQ-FVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGI 221
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ + G DEA E+ ++M NC+P S+ +S ++ ++ +A F EM +
Sbjct: 222 MVDVLCKAGRVDEAVEVVKEMDVG-NCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKK 280
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT---QTPK- 334
G + ++ +LI + K + +V R L + G+ P+ R C +++ M QT +
Sbjct: 281 GIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRA 340
Query: 335 -EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFK 369
++++ E ++K+ E+ ++E K
Sbjct: 341 FRVFCRMIKLCEPDADTYTMMIKMFCEKNELEMALK 376
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 39/277 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S L++ +G A N V+ EM G P+++TY ++D + +A R + +
Sbjct: 180 DEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVV 239
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM P Y+ L+ YG ED + + EM +KG++ V YN L+ V
Sbjct: 240 KEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKV 299
Query: 227 -----------------------------------GYTDEAFEIFEDMKSSENCQPDSWT 251
G TD AF +F M + C+PD+ T
Sbjct: 300 NKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRM--IKLCEPDADT 357
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++ MI + + ++ A ++ M F P++ ++LI+ + + +
Sbjct: 358 YTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMI 417
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
E GI P G L ++ + +E++ K + EK N
Sbjct: 418 EKGIRPSRITFGRLRQLLIKEGREDVLKFLH--EKMN 452
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 13/288 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI +G G D +++++EMK G+ P Y +L + R + +
Sbjct: 229 DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLV 288
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + G + TY L++ G+A E+ S++ M ++G + V L N L+ +
Sbjct: 289 QEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKA 348
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A ++FE+M+S + C P+ T++++I + + + SEA + +M E G P+ F
Sbjct: 349 GRLADAIKLFEEMESLQ-CTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSF 407
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ LI + K R + + L + E G P L+N + + + E E +
Sbjct: 408 TYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN--ELFQ 465
Query: 346 KSNSKLGY----VVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCN 389
+ GY V ++++ G EA +LFN ++KK CN
Sbjct: 466 ELRENCGYSSARVYAVMIKHLGKCGRL-SEAVDLFN----EMKKLGCN 508
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 4/233 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-RPW 160
E + D + LI L G AG + ++EEM+++ PN++TYN ++ + +K R
Sbjct: 329 EGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARAS 388
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ Y++M +NG+ P+ TY+ L+ + + E L + EM EKG Y +L+
Sbjct: 389 EAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLI 448
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSW-TFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ A E+F++++ ENC S ++ MI G++SEA +FNEM + G
Sbjct: 449 NALGKAKRYEAANELFQELR--ENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLG 506
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
P+++ +L+ + TD+ L + E G TPD +LN +T
Sbjct: 507 CNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFART 559
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 22/274 (8%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTM 153
Y + R K + N ++++I + G+ + +Y EM G P+ +TY+ L+
Sbjct: 183 YQIKGR--KCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAF 240
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
G+ R +++ EM +NGL P Y ++L Y + E L + +EMKEKG L+V
Sbjct: 241 GKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTV 300
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
Y L+ G +EA+ IF +M E C+PD +++I + G++++A +F
Sbjct: 301 YTYTELIKGVGKAGKVEEAYSIFMNM-LKEGCKPDVVLINNLINLLGKAGRLADAIKLFE 359
Query: 274 EMLEAGFEPNLFVLTSLIQC-YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
EM PN+ ++I+ + R + ++ E G+ P L++ +T
Sbjct: 360 EMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKT 419
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEG 366
+ VEK+ LLLEE D +G
Sbjct: 420 NR---------VEKA--------LLLLEEMDEKG 436
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P++F S LI + + L + EEM G P Y +L++ +G+AKR
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++E+ +N + YA +++ G+ + + ++ EMK+ G V YN L++
Sbjct: 462 ELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
VG TDEA + M+ + C PD + + ++ + G A MF M + +P+
Sbjct: 522 VRVGMTDEAHSLLRTMEEN-GCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPD 580
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +++ C +A ++ + + + G D
Sbjct: 581 VVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYD 615
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 4/158 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ +IK G G ++++ EMK +G P++ YN L+ M R + ++ + M
Sbjct: 478 VYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTM 537
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+NG +P+ N++ +L + R + + ++ MK ++ V YNT+L + G
Sbjct: 538 EENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMF 597
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
+EA ++ ++M +S+ + D T+SS I GK+ E
Sbjct: 598 EEAAKLMKEM-NSKGFEYDLITYSS---ILEAVGKIDE 631
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A ++ +++E++ + Y ++ +G+ R + ++
Sbjct: 441 PAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFN 500
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G +P+ Y +L+ R ++ S+ R M+E G + +N +L A G
Sbjct: 501 EMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTG 560
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+F MK+S+ +PD ++++++ S G EA + EM GFE +L
Sbjct: 561 GPKGAIEMFTRMKNSK-IKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITY 619
Query: 288 TSLIQCYGK 296
+S+++ GK
Sbjct: 620 SSILEAVGK 628
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 27/260 (10%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTL--IKLYGTAGNFDGCLNVYE 132
K + W P + +A ++ + D R E +ID + K G NF+ Y
Sbjct: 70 KIFKW-GPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTTY- 127
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+ + LD G W KTI +EM + + +++ G+A+
Sbjct: 128 -----------MALIHCLDEAGMLGEMW--KTI-QEMVRSTCVIGPADLSEIVKVLGKAK 173
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
LS++ ++K + + + YN+++ M G+ ++ E++ +M + +C PD+ T+
Sbjct: 174 MVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTY 233
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
S++I G+ A ++F+EM E G P + T+++ Y K R +
Sbjct: 234 SALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA--------- 284
Query: 313 LGITPDDRFCGCLLNVMTQT 332
LG+ + + GC L V T T
Sbjct: 285 LGLVQEMKEKGCALTVYTYT 304
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D N+ + ++ + G G + ++ MK +KP++++YN +L + RA + +
Sbjct: 545 DLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR 190
KEM G + TY+S+L A G+
Sbjct: 605 KEMNSKGFEYDLITYSSILEAVGK 628
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 2/228 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+T+I Y G D L + M+ +G++ ++ TYN L + R R K + MT
Sbjct: 311 FNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT 370
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+NG+ N+ +Y +L+ + + + ++R+M+ KG + SV YN ++ G
Sbjct: 371 ENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIR 430
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E F+ + PD +T+++++ GKV A +F EM + G +PN+ T+L
Sbjct: 431 EA-ERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTAL 489
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEEL 337
I K R+++ + + + G+TPDD L+ + T K+E+
Sbjct: 490 ISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDEI 537
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 14/281 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
I P + S ++ + AG D + +EM GVK N YN LLDT R K +V +
Sbjct: 131 ITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEV 190
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM G+ P TY L+ A SV+ E+K K + V Y+ ++
Sbjct: 191 LKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCR 250
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A E+F++ + +P+ T+ ++I G++ AE + +M G N
Sbjct: 251 AGNVRRASEVFDECVGN-GIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQI 309
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-----DRFCG-CLLNVMTQTPKEELGK 339
+ ++I Y + D + + +GI D CG C +N M E+ K
Sbjct: 310 IFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRM-----EDAKK 364
Query: 340 LVECVEKSNSKLGYV-VKLLLEEQDIEGDFKKEATELFNSI 379
L+ + ++ + YV L+ EGD EA LF +
Sbjct: 365 LLHIMTENGVESNYVSYTTLISIHSKEGDM-VEARRLFRDM 404
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++TLI ++ G+ ++ +M+ G +P+++TYN ++D ++ + + KEM
Sbjct: 380 SYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEM 439
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
GL P+ TYA+L+ + + L ++ EMK++G + +V Y L++ A G +
Sbjct: 440 EKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRS 499
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMI 256
+EAF+ +++M ++ PD +S ++
Sbjct: 500 EEAFQFYDNMLAA-GLTPDDTLYSMLV 525
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ + G D L ++EEMK G KPN++ Y L+ + + R + Y
Sbjct: 447 DVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFY 506
Query: 167 KEMTDNGLSPNWNTYASLL 185
M GL+P+ Y+ L+
Sbjct: 507 DNMLAAGLTPDDTLYSMLV 525
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
ID + ++ ++ + + E++ A G P + TYN LL+ + + R + +
Sbjct: 257 IDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDL 316
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++ DNG +P+ TY SL+ G+ + + +++EM +G+ L Y L+
Sbjct: 317 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 376
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A +++ M +S C PD T S+MI S G++ A +F M G PN
Sbjct: 377 TGKIPQASSVYKTM-TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEV 435
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V ++LI KA++ D + L ++ + TPD
Sbjct: 436 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 468
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ FS LI AG ++ +E G ++ TY +++ + + K+ + +
Sbjct: 222 VSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVAL 281
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++T NG +P TY +LL + E+ + + R++ + G V Y +L+
Sbjct: 282 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 341
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ EA+++F++M +S D+ ++++I GK+ +A +++ M G P++
Sbjct: 342 EKRSFEAYKLFKEM-ASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVV 400
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L+++I KA R VR + G+ P++ L++ + + K
Sbjct: 401 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 42/245 (17%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LI+ G +VY+ M + G P+++T + ++D + +A R I
Sbjct: 362 LDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 421
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGE----------------DTL----------- 198
+K M GL+PN Y++L+ +AR + DT+
Sbjct: 422 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481
Query: 199 --------SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ + EM E G + V YN L++ G TD A + +DM SS +
Sbjct: 482 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR------F 535
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+SS++ GK+ +F+EM +G N T LI KA R D+ V N +
Sbjct: 536 VYSSLVDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAI 594
Query: 311 PELGI 315
+ G+
Sbjct: 595 RKEGM 599
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 143/334 (42%), Gaps = 18/334 (5%)
Query: 98 RARNEKWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
R E + + P+ + + L+G +G ++ +E ++ + + T++ L++ + +
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILINGLVK 236
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
A Q ++ +E T NG + + +TY +++ + + ++ +++ ++ G ++
Sbjct: 237 AGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIAT 296
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
YN LL +G +EA ++ + + C PD T++S+I + EA +F EM
Sbjct: 297 YNALLNGLCKMGRLEEAIDLLRKIVDN-GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 355
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
G + T+LI+ + + + G PD +++ +++ +
Sbjct: 356 ASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR- 414
Query: 336 ELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYC------- 388
+G V + KS G ++ I G K + + +KKA+C
Sbjct: 415 -IGAAVR-IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 472
Query: 389 NCLIDLCVNLNLLENAC----KLLELGLTLEVYT 418
N LID +E A ++LE G +VYT
Sbjct: 473 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 506
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEM-TDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+P++ T+N L+ A+ P + + +EM D G++P+ T+ +L +G + G+
Sbjct: 151 RPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVL--HGLCKSGKVLA 208
Query: 199 SV-YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++ + E + M +S ++ L+ G +A + ++ ++ C D T+++++
Sbjct: 209 AMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQE-TTTNGCTIDIHTYTAIVN 267
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ K+ EA A+ ++ G P + +L+ K R ++ + L ++ + G TP
Sbjct: 268 WLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 327
Query: 318 D 318
D
Sbjct: 328 D 328
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 6/229 (2%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAK 157
K RI PN F+ I AG + +V E++KA G PN++TYN L+D G A
Sbjct: 193 KRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAG 252
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ I KEM N + PN T+ +L+ + + + + EM+ +G++ ++ YN
Sbjct: 253 KMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYN 312
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L+ ++ G DEA +++ M +P+ TF+++I + + EA +F+++ E
Sbjct: 313 SLINGLSNNGKLDEAIALWDKM-VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAE 371
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
PN ++I + KA ++ N + + GI P+ CL+
Sbjct: 372 QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLI 420
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 7/238 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLY---GTAGNFDGCLNVYEEMKAIGVK 140
+A KL K+ D + W PN ++TLI + G+AG + +EM A +
Sbjct: 212 KAGKL-NKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKIC 270
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN IT+N L+D + + K ++EM GL PN TY SL+ ++ +++
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL 330
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ +M G++ ++ +N L+ EA ++F+D+ + ++ P++ TF++MI
Sbjct: 331 WDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDI-AEQDLVPNAITFNTMIDAFC 389
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + E A+ N ML+ G PN+ LI + Q + LN + + D
Sbjct: 390 KAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKAD 447
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 16/246 (6%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+I PN F+TLI + N N +EEM+ G+KPN++TYN+L++ + + +
Sbjct: 268 KICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEA 327
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ +M GL PN T+ +L+ + + + ++ ++ ++ E+ + + +NT++
Sbjct: 328 IALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDA 387
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G +E F + M E P+ T++ +I V A+ + NEM +
Sbjct: 388 FCKAGMMEEGFALHNSM-LDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKA 446
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC--GCL---LNVM 329
++ LI + K + L + +G+ P+ D +C G L L V
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVR 506
Query: 330 TQTPKE 335
TQ KE
Sbjct: 507 TQMEKE 512
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 6/224 (2%)
Query: 109 NAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
NA T L+ Y T V+ ++ G K ++ + N LL + + +++ +Y
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC-- 223
KEM + PN T+ + +A V ++K G ++ YNTL+ C
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G A I ++M +++ C P+ TF+++I V A+ F EM G +PN
Sbjct: 249 GSAGKMYRADAILKEMLANKIC-PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPN 307
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ SLI + D+ + +++ LG+ P+ L+N
Sbjct: 308 IVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALIN 351
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 52/186 (27%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM+ +K +++TYN L+ + P + + + EM + G+ PN TY +L+ Y
Sbjct: 438 EMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEG 497
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
+ L V +M+++G + +V YN L+ G+ C+
Sbjct: 498 NLKAALKVRTQMEKEGKRANVVTYNVLIK-----GF----------------CKT----- 531
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
GK+ +A + NEMLE G PN + T DVVR + E
Sbjct: 532 ----------GKLEDANRLLNEMLEKGLNPN--------------RTTYDVVRL--EMLE 565
Query: 313 LGITPD 318
G PD
Sbjct: 566 KGFIPD 571
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++TL+ Y GN L V +M+ G + N++TYN L+ + +
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDAN 538
Query: 164 TIYKEMTDNGLSPNWNTY 181
+ EM + GL+PN TY
Sbjct: 539 RLLNEMLEKGLNPNRTTY 556
>gi|168055626|ref|XP_001779825.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668737|gb|EDQ55338.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 734
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 80 VNPKSPRASKLKEKSYDTRAR-NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG 138
++P S +S K ++ D R E +P ++ +I+ + GN C V + MK +G
Sbjct: 248 IDPVSVVSSCAKLRNIDLARRFVELLSRNPWHYNLIIREFSRHGNLRSCFKVLDFMKELG 307
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
V P++ TY L+D+ GR K P + ++++M ++G PN Y S++ +
Sbjct: 308 VMPDVFTYRVLIDSCGRHKEPSKATIVFEKMLNDGFEPNRFVYNSIMNV--NVGNLSEVR 365
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
++ M+ G+ VT YN LL A G D A +++ +K + D +S++I +
Sbjct: 366 RYFQHMQGAGIAADVTSYNILLKAYAASGRADLAGDLYAQIKKAGKVTLDVVFYSTLINV 425
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EA + +MLEAG PN+ TS+I A D R + + G P+
Sbjct: 426 FGKAKMWEEALRVKADMLEAGVTPNVVTWTSIIGACATAGLVDQSFREFDEMLNAGCRPN 485
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
E+++ +PN+ITYN ++ G A +V+++ +EM GL P+ +++ LL +YG
Sbjct: 556 EDVRLACCRPNIITYNCMMKACGSASE--KVRSLMREMRALGLVPDVKSWSILLDSYGSK 613
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
E EMK G + V Y +L+ C G+ ++AF+ F MK++ +P++ T
Sbjct: 614 GDVEGASEALEEMKAAGFKPDVVAYTSLIQACVQAGHLEKAFDYFSKMKAA-GVRPNAVT 672
Query: 252 FSSMITICSCRG---KVSEAEAMFNEMLEAG 279
++S++ G +V A A++ EM EAG
Sbjct: 673 YNSLLRRHRNYGTLPEVQRALALYEEMREAG 703
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 117/296 (39%), Gaps = 51/296 (17%)
Query: 71 GSSPKSYIWVNPKSPRASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLN 129
G P +++ + + L E + Y + D +++ L+K Y +G D +
Sbjct: 342 GFEPNRFVYNSIMNVNVGNLSEVRRYFQHMQGAGIAADVTSYNILLKAYAASGRADLAGD 401
Query: 130 VYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
+Y ++K G V +++ Y+ L++ G+AK + + +M + G++PN T+ S++ A
Sbjct: 402 LYAQIKKAGKVTLDVVFYSTLINVFGKAKMWEEALRVKADMLEAGVTPNVVTWTSIIGAC 461
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN---- 244
A + + + EM G + +V YN LL C D AF +FE+ K++
Sbjct: 462 ATAGLVDQSFREFDEMLNAGCRPNVNCYNMLLQACIMASQFDRAFLLFEEWKTTGRMRSY 521
Query: 245 -----------------------------------------CQPDSWTFSSMITICSCRG 263
C+P+ T++ M+ C G
Sbjct: 522 SEIFNYSAPLAKTHELITVIPGSLLQSNLGEKIDEDVRLACCRPNIITYNCMMKAC---G 578
Query: 264 KVSE-AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SE ++ EM G P++ + L+ YG + AL + G PD
Sbjct: 579 SASEKVRSLMREMRALGLVPDVKSWSILLDSYGSKGDVEGASEALEEMKAAGFKPD 634
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 103/263 (39%), Gaps = 51/263 (19%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
K +D +STLI ++G A ++ L V +M GV PN++T+ +++ A Q
Sbjct: 411 KVTLDVVFYSTLINVFGKAKMWEEALRVKADMLEAGVTPNVVTWTSIIGACATAGLVDQS 470
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM + G PN N Y LL+A A + ++ E K G S Y+ +
Sbjct: 471 FREFDEMLNAGCRPNVNCYNMLLQACIMASQFDRAFLLFEEWKTTGRMRS---YSEIFNY 527
Query: 223 CADVGYTDEAFEIF--------------EDMKSSENCQPDSWTFSSMITICSC------- 261
A + T E + ED++ + C+P+ T++ M+ C
Sbjct: 528 SAPLAKTHELITVIPGSLLQSNLGEKIDEDVRLA-CCRPNIITYNCMMKACGSASEKVRS 586
Query: 262 --------------------------RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
+G V A EM AGF+P++ TSLIQ
Sbjct: 587 LMREMRALGLVPDVKSWSILLDSYGSKGDVEGASEALEEMKAAGFKPDVVAYTSLIQACV 646
Query: 296 KAQRTDDVVRALNRLPELGITPD 318
+A + +++ G+ P+
Sbjct: 647 QAGHLEKAFDYFSKMKAAGVRPN 669
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S L+ YG+ G+ +G EEMKA G KP+++ Y +L+ +A + +
Sbjct: 599 DVKSWSILLDSYGSKGDVEGASEALEEMKAAGFKPDVVAYTSLIQACVQAGHLEKAFDYF 658
Query: 167 KEMTDNGLSPNWNTYASLLRA---YGRARYGEDTLSVYREMKEKG 208
+M G+ PN TY SLLR YG + L++Y EM+E G
Sbjct: 659 SKMKAAGVRPNAVTYNSLLRRHRNYGTLPEVQRALALYEEMREAG 703
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 111/274 (40%), Gaps = 51/274 (18%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
+K+ E++ +A + + PN ++++I TAG D ++EM G +PN+
Sbjct: 429 AKMWEEALRVKADMLEAGVTPNVVTWTSIIGACATAGLVDQSFREFDEMLNAGCRPNVNC 488
Query: 146 YNNLLD-------------------TMGR--------------AKRPWQVKTIYKEMTDN 172
YN LL T GR AK + I + +
Sbjct: 489 YNMLLQACIMASQFDRAFLLFEEWKTTGRMRSYSEIFNYSAPLAKTHELITVIPGSLLQS 548
Query: 173 GLS-------------PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
L PN TY +++A G A E S+ REM+ G+ V ++ L
Sbjct: 549 NLGEKIDEDVRLACCRPNIITYNCMMKACGSA--SEKVRSLMREMRALGLVPDVKSWSIL 606
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L G + A E E+MK++ +PD ++S+I C G + +A F++M AG
Sbjct: 607 LDSYGSKGDVEGASEALEEMKAA-GFKPDVVAYTSLIQACVQAGHLEKAFDYFSKMKAAG 665
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
PN SL++ + +V RAL E+
Sbjct: 666 VRPNAVTYNSLLRRHRNYGTLPEVQRALALYEEM 699
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + +I + +G D + ++++MK G KP TYN L+ G RP++ +
Sbjct: 129 DSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLL 188
Query: 167 KEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M D + PN TY L++A+ + E+ +V +M G+Q V YNT+ A
Sbjct: 189 EMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQ 248
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G T++A + M+ ++ +P+ T +I+ G ++EA M E G PN
Sbjct: 249 NGETEKAERLILKMQYNK-VKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPV 307
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V SLI+ Y A T+ V AL + E GI PD
Sbjct: 308 VFNSLIKGYLDATDTNGVDEALTLMEEFGIKPD 340
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 106/198 (53%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+ + G KP +ITY L+ + R KR + + ++ DNG+ P+ +++ A+
Sbjct: 82 VFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFS 141
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ + ++++MKE G + + + YNTL+ VG E+ ++ E M EN +P+
Sbjct: 142 DSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPND 201
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ +I + K+ EA + ++M+ +G +P++ ++ + Y + T+ R + +
Sbjct: 202 RTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILK 261
Query: 310 LPELGITPDDRFCGCLLN 327
+ + P++R CG +++
Sbjct: 262 MQYNKVKPNERTCGIIIS 279
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 7/226 (3%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K + ++E + + ++ LI+ + T + NV +M A G++P+++TYN +
Sbjct: 186 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 245
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ + + + +M N + PN T ++ Y + + L MKE G+ +
Sbjct: 246 YAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPN 305
Query: 213 VTLYNTLLAM---CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
++N+L+ D DEA + E+ +PD TFS+++ S G + E
Sbjct: 306 PVVFNSLIKGYLDATDTNGVDEALTLMEEF----GIKPDVVTFSTIMNAWSSAGLMDNCE 361
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+FN+M++AG EP++ + L + Y +A + L + + G+
Sbjct: 362 EIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGV 407
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P F++LIK Y A + +G M+ G+KP+++T++ +++ A + I+
Sbjct: 305 NPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIF 364
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M G+ P+ + Y+ L + Y RA S+ M + G+Q +V ++ T+++
Sbjct: 365 NDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAA 424
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D AF + E M P+ T+ ++I + +AE + + M E G P +
Sbjct: 425 GKMDRAFSLCEKMHEM-GTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEM-- 481
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
S +Q A R + + NR+
Sbjct: 482 --STMQLVADAWRAIGLFKEANRI 503
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 105 RIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
++ PN + +I Y GN L MK +GV PN + +N+L+ A V
Sbjct: 266 KVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGV 325
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
M + G+ P+ T+++++ A+ A ++ ++ +M + G++ + Y+ L
Sbjct: 326 DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKG 385
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G +A + M S Q + F+++I+ GK+ A ++ +M E G P
Sbjct: 386 YVRAGQPRKAESLLTSM-SKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSP 444
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
NL +LI YG+A++ L+ + E G+ P+
Sbjct: 445 NLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPE 480
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
+GK EA+A+F+ + E G +P L T+L+ + +R + L+++ + G+ PD
Sbjct: 73 KGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSIL 132
Query: 322 CGCLLNVMTQTPK 334
++N + + K
Sbjct: 133 LNAMINAFSDSGK 145
>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 426
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 118/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIYLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 112 PNTASYSTLLTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 232 TLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQV 290
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 DRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKKS-GFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQ 161
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 3/250 (1%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
KL +++D + I P+ +S LI + G ++++ +M +KP++ T+
Sbjct: 239 KLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTF 298
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L++ + + + KT++ M G+ PN+ TY SL+ Y + S++ M +
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ + Y+ ++ + DEA +F++M +N PD T+SS+I S G++S
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM-HRKNIIPDVVTYSSLIDGLSKSGRIS 417
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
A + ++M + G PN+ S++ K + D + L + + G PD L+
Sbjct: 418 YALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILI 477
Query: 327 NVMTQTPKEE 336
+ Q+ K E
Sbjct: 478 KGLCQSGKLE 487
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 109/216 (50%), Gaps = 3/216 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ D ++ TLI G L++ + + V+PN++ YN ++D+M + K +
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
++ EM G+SP+ TY++L+ + +D + ++ +M + ++ V +N L+ A
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C D G E +F DM + +P+ T++S++ +V++A+++FN M + G P
Sbjct: 306 CKD-GKMKEGKTVF-DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + +I + K ++ D+ + + I PD
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TL K G ++++ A+G + I+Y L+ + + +
Sbjct: 154 DTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLL 213
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + N + PN Y +++ + + + + ++ EM KG+ V Y+ L++ +
Sbjct: 214 QRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCIL 273
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A ++F M EN +PD +TF+ ++ GK+ E + +F+ M++ G +PN
Sbjct: 274 GKLKDAIDLFNKM-ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
SL+ Y + + N + + G+ PD + ++N + K
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 111/253 (43%), Gaps = 34/253 (13%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E + D F+ L+ + G V++ M G+KPN +TYN+L+D K +
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
K+I+ M G++P+ +Y+ ++ + + + ++ +++++EM K + V Y++L+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 222 MCADVGYTDEAFEIFEDMKS----------------------------------SENCQP 247
+ G A ++ + M + QP
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T+S +I GK+ +A +F ++L G+ +++ T +IQ + ++ + L
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528
Query: 308 NRLPELGITPDDR 320
+++ + G PD +
Sbjct: 529 SKMEDNGCIPDAK 541
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S+LI +G L + ++M GV PN+ TYN++LD + + + + +
Sbjct: 399 DVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALL 458
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
+ D G P+ +TY+ L++ ++ ED V+ ++ KG L V Y ++ C +
Sbjct: 459 TKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVE 518
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA + M+ + C PD+ T+ +I + + AE + EM+ G N +
Sbjct: 519 -GLFNEALALLSKMEDN-GCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576
Query: 286 --VLTSLIQ 292
LT L Q
Sbjct: 577 DLYLTRLAQ 585
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA---- 187
++M+ G+KPN++ N L++ + +++ ++ G P+ T+ +L +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 188 -----------------------------YGRARYGED--TLSVYREMKEKGMQLSVTLY 216
+G + GE L + + + +Q +V +Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NT++ V +EAF++F +M S+ PD T+S++I+ GK+ +A +FN+M+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEM-VSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P+++ L+ + K + + + + + GI P+
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPN 329
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN + P S ++++ G A + ++ ++K +P YN+++ + +
Sbjct: 150 VRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQ 209
Query: 159 PWQVKTIYKEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V +Y EM+ G P+ TY++L+ A+ + + + EMKE GMQ + +Y
Sbjct: 210 YGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYT 269
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ + + A +FE+M+ + C+PD +T++ +I G++ EA F EM
Sbjct: 270 MLITLFFKLDDVHGALSLFEEMR-HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQR 328
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P+ V+ ++I GKA R DD ++ + L P
Sbjct: 329 EGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIP 368
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + G D + EMK G++P Y L+ + +++
Sbjct: 229 DTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM P+ TY L+R G+A ++ + EM+ +G + + N ++
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA 348
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++F++M + C P T++++I + + + SE + F M E+G P+ F
Sbjct: 349 GRLDDAMKLFQEM-GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 407
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ LI + K R + + L + E G P
Sbjct: 408 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 439
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
A++++I + G + +Y EM G P+ +TY+ L+ + R +
Sbjct: 195 QAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLN 254
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM +NG+ P Y L+ + + LS++ EM+ + + V Y L+ G
Sbjct: 255 EMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAG 314
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA+ F +M+ E C+PD+ ++MI G++ +A +F EM P++
Sbjct: 315 RIDEAYHFFYEMQ-REGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTY 373
Query: 288 TSLIQC-YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
++I+ + R +V R+ E GI+P L++ +T + E
Sbjct: 374 NTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRME 423
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 2/213 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+E MK G+ P+ TY+ L+D + R + + +EM + G P Y SL+ A G+
Sbjct: 394 FERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
A+ + +++E+KE S +Y ++ G D+A +F++M + C PD +
Sbjct: 454 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM-NKLGCAPDVY 512
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
++++++ + G + EA + M E G P++ ++ K + L+ +
Sbjct: 513 AYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM 572
Query: 311 PELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
+ + PD +L ++ EE KL+E
Sbjct: 573 KQSTVRPDVVSYNTVLGALSHAGMFEEAAKLME 605
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 3/236 (1%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P++F S LI + + + + EEM G P Y +L+D +G+AKR
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 461
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++E+ +N S + YA +++ G+A +D ++++ EM + G V YN L++
Sbjct: 462 ELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGL 521
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A G DEA M+ C PD +++ ++ + G A M + M ++ P+
Sbjct: 522 ARTGMLDEALSTMRRMQ-EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 580
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+ +++ A ++ + + + LG D +L + + E G+
Sbjct: 581 VVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDHEYTGQ 636
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS-LLRAYGRARYGEDTLSVYRE 203
TY L+ + ++ ++ + +EM N + T S ++R G A+ ++++ +
Sbjct: 125 TYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQ 184
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+K + Q + YN+++ M G + E++ +M + +C PD+ T+S++I+ G
Sbjct: 185 IKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLG 244
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+ A + NEM E G +P + T LI + K DDV AL+ E+
Sbjct: 245 RRDSATQLLNEMKENGMQPTTKIYTMLITLFFK---LDDVHGALSLFEEM 291
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ I +G AGN D + E+KA G+KP+ ++Y +++ + +A R + + ++
Sbjct: 248 DIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 307
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M P Y +++ YG A ED + ++E+G SV +N++L
Sbjct: 308 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK 367
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA +FE MK ++ +P+S T++ +I + G+V EA + +EM A PNL
Sbjct: 368 RKVDEALSLFEVMK--KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 425
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ ++ KA++ ++ + + G PD
Sbjct: 426 VNIMVDRLCKARKLEEAYKIFESASQRGCNPD 457
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P +++LI+ + G + +++E+ G KP++ N +D + +A + + I+
Sbjct: 492 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 551
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+++ G P+ +Y+ L+ +A +T +++ MK++G L YN ++
Sbjct: 552 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 611
Query: 227 GYTDEAFEIFEDMKSSENC-QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A+EI E+MK E C QP T+ +++ + ++ EA +F E G E N+
Sbjct: 612 GKVHKAYEILEEMK--EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +SLI +GK R D+ L + + G+TP+ LL+ + + EE+ + + C +
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA--EEINEALVCFQ 727
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 1/197 (0%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
A D + M+ + +P Y L+ + A+RP + + ++M + G +
Sbjct: 157 ARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHL 216
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
+ +L+RA R D L++ E+K ++ + LYN + G D A++ F ++K
Sbjct: 217 FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELK 276
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
++ +PD +++SMI + G++ EAE +F +M P + ++I YG A R
Sbjct: 277 -AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRF 335
Query: 301 DDVVRALNRLPELGITP 317
+D + L RL E G P
Sbjct: 336 EDAYKLLERLRERGCIP 352
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 4/246 (1%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRA-RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
+SY + +A + +E S A + + + +D A++ ++ + +G + EE
Sbjct: 564 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 623
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK V+P + TY ++D + + R + +++E G+ N Y+SL+ +G+
Sbjct: 624 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 683
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ + EM +KG+ +V +N+LL +EA F+ MK + C P+++T+S
Sbjct: 684 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK-CPPNTYTYS 742
Query: 254 SMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+I +C + K ++A + +M + G PN+ T++I K D R
Sbjct: 743 ILINGLCRVQ-KYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 801
Query: 313 LGITPD 318
G PD
Sbjct: 802 NGGIPD 807
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 102/200 (51%), Gaps = 1/200 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+++ ++ +S+LI +G G D + EEM G+ PN+ T+N+LLD + +A+
Sbjct: 659 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 718
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M + PN TY+ L+ R + +++M+++G+ +V Y T
Sbjct: 719 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 778
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+++ A VG +A+ +FE K++ PD+ +F+++I S + EA +F E
Sbjct: 779 MISGLAKVGNITDAYSLFERFKANGGI-PDAASFNALIEGMSNANRAMEAYQVFEETRLR 837
Query: 279 GFEPNLFVLTSLIQCYGKAQ 298
G N+ SL+ K++
Sbjct: 838 GCRINIKSCISLLDALNKSE 857
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
AG + ++E++++ G P++ +Y+ L+ + +A + + I+ M G + +
Sbjct: 541 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 600
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y +++ + ++ + EMKEK +Q +V Y ++ A + DEA+ +FE+ K
Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
S + + + +SS+I G++ EA + EM++ G PN++ SL+ KA+
Sbjct: 661 S-KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 719
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
++ + + E+ P+ L+N + + K
Sbjct: 720 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 753
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 150/327 (45%), Gaps = 21/327 (6%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN+ ++ +I + G + + +EM+ + PN++T N ++D + +A++ +
Sbjct: 385 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 444
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I++ + G +P+ TY SL+ G+ ++ ++ +M + G + +Y +L+
Sbjct: 445 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 504
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++ +IF+++ C+PD ++ + G+V + +F ++ GF P++
Sbjct: 505 IHGRKEDGHKIFKEL-IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 563
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-----EELGK 339
+ LI KA + + + + + G D R +++ ++ K E L +
Sbjct: 564 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 623
Query: 340 LVE-CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF---NSISKDVKKAYCNCLIDLC 395
+ E CV+ + + G +V L + ++ EA LF S ++ + LID
Sbjct: 624 MKEKCVQPTVATYGAIVDGLAKIDRLD-----EAYMLFEEAKSKGIELNVVLYSSLIDGF 678
Query: 396 VNLNLLENACKLLE----LGLTLEVYT 418
+ ++ A +LE GLT VYT
Sbjct: 679 GKVGRIDEAYLILEEMMKKGLTPNVYT 705
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 94/205 (45%), Gaps = 1/205 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R K+R +A++ LI A + L + +M+ +G + + + L+ + R +
Sbjct: 171 RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 230
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ E+ + L P+ Y + +G+A + + E+K +G++ Y ++
Sbjct: 231 ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSM 290
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G EA E+F M+ +E P ++ +++MI G+ +A + + E G
Sbjct: 291 IWVLCKAGRLGEAEELFAQME-AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 349
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVV 304
P++ S++ C GK ++ D+ +
Sbjct: 350 CIPSVVSFNSILTCLGKKRKVDEAL 374
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ + +EM G A L A RAR +D + M+ + + + Y L+
Sbjct: 128 LEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIG 187
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A+ + A E+ M+ + F++++ + G+V++A A+ +E+ + E
Sbjct: 188 ALAEARRPERALELLRQMQEV-GYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLE 246
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ + I C+GKA D + + L G+ PDD
Sbjct: 247 PDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDD 284
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K + PN ++T+I GN +++E KA G P+ ++N L++ M A R
Sbjct: 765 QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRA 824
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+ +++E G N + SLL A ++ E V ++E
Sbjct: 825 MEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLRE 871
>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 564
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN FS + G AG + L + M+A PN+ TY +D G+A +
Sbjct: 178 VPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQ 237
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM + G++PN T+ S + A G ++ L++ R+M G+Q ++ Y + C
Sbjct: 238 GLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTAC 297
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D A + E M+ S + D +F++ I C+ G A A+ +EM + G P
Sbjct: 298 GDNNRWARALAVHEQMR-SRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPT 356
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++ I GK Q+ V L + E+G++P++
Sbjct: 357 VRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNE 392
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ I G AG + + EM+ GV PN+IT+N+ + +G + + +
Sbjct: 215 PNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNL 274
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M G+ PN +Y + + A G L+V+ +M+ +G++ + + CA
Sbjct: 275 LRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQ 334
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A + ++M+ E P +FS+ I+ C + A A+ EM E G PN
Sbjct: 335 GGAWEMALALLDEMRD-EGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEV 393
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ I G+A + + L+++ G+
Sbjct: 394 SFNAAIDACGRAGQWRAALSLLDKMSSAGV 423
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ + G + L V+E+M++ G++ + +++ +D + W++
Sbjct: 283 VQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGG-AWEMA 341
Query: 164 -TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM D G+ P ++++ + A G+ + +++ REM+E G+ + +N +
Sbjct: 342 LALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDA 401
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
C G A + + M SS + T++++I C + + A ++ EML
Sbjct: 402 CGRAGQWRAALSLLDKM-SSAGVPRGTITYNAVIAACGKGKEWARAVSVLREML 454
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ R D +F+ I G ++ L + +EM+ G+ P + +++ + G+ ++
Sbjct: 314 RSRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQW 373
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +EM + G+SPN ++ + + A GRA LS+ +M G+ YN +
Sbjct: 374 GRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGTITYNAV 433
Query: 220 LAMCADVGYTDEAFEIFEDM-----KSSENCQP----DSWTFSSMITICSCRGKVSEA 268
+A C A + +M K+ + P D ++S+ I C G+ EA
Sbjct: 434 IAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAGEWEEA 491
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 16/190 (8%)
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L + GR + + T ++G+ + TY+ L+ A R+ E+ L + M+ +G+
Sbjct: 41 LKSQGRKGQWKEALTAANLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGV 100
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMK-------SSENCQPDSWTFSSMITICSCR 262
+ + CA G + A + + ++ P+ TFSS + C
Sbjct: 101 APDHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGNA 160
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
G+ A + ++M E G PN F ++ + GKA + + L R+ R
Sbjct: 161 GQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRM---------RAA 211
Query: 323 GCLLNVMTQT 332
C NV T T
Sbjct: 212 NCPPNVQTYT 221
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 7/270 (2%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
++ R+D F+TL+ G + + M +GV+P++I+YN L+D R
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRID 499
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + + GL P+ TY +LL Y +AR +D S++REM KG+ V YNT+L
Sbjct: 500 EAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 559
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G EA E++ M +S Q + +T++ +I V EA MF+ +
Sbjct: 560 HGLFQTGRFSEAKELYLSMINSRT-QMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDL 618
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGK 339
+ ++F +I K R +D + + G+ PD + +C N++ + EEL +
Sbjct: 619 QLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDE 678
Query: 340 LVECVEKS----NSK-LGYVVKLLLEEQDI 364
L +E++ NS+ L +V+ LL DI
Sbjct: 679 LFSAMEENGTAPNSRMLNALVRWLLHRGDI 708
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 135/280 (48%), Gaps = 3/280 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ + Y D ++++++M+ + PN++TY L+D + + R +
Sbjct: 341 DHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKF 400
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M D G++P+ ++SL+ E ++ E+ ++G++L +NTL+
Sbjct: 401 NQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCRE 460
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA + D+ +PD ++++++ G++ EA + + ++ G +P+
Sbjct: 461 GRVMEAQRLI-DLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVT 519
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
+L+ Y KA+R DD + G+TPD +L+ + QT + E +L +
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 579
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI-SKDVK 384
S +++ ++ + +F EA ++F+S+ SKD++
Sbjct: 580 NSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQ 619
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + + ++ LI Y + G + + + +EM G++P+ Y LLD + + R + +
Sbjct: 234 RPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARN 293
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I+ + G+ PN Y LL Y + S M G+ ++N + A
Sbjct: 294 IFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYA 353
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
DEA IF+ M+ + P+ T+ ++I G+V +A FN+M++ G P++
Sbjct: 354 KKAMIDEAMHIFDKMR-QQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDI 412
Query: 285 FVLTSLIQCYG 295
FV +SL+ YG
Sbjct: 413 FVFSSLV--YG 421
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 34/212 (16%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN++TY ++D + +A+ + K +++ M D G+ PN +TY L+ Y ++ + +
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQM 259
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFE----------------------- 237
+EM G+Q +Y LL G EA IF+
Sbjct: 260 LQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT 319
Query: 238 -----------DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D+ PD F+ M + + + EA +F++M + PN+
Sbjct: 320 EGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVT 379
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI K R DD V N++ + G+TPD
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMIDEGMTPD 411
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 10/231 (4%)
Query: 104 WRI-DPNAFSTLIKLYGTAGNFDGCLNVY-EEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
WR+ D FS L+K A D ++ M G P++ +Y+ LL KR +
Sbjct: 123 WRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEE 182
Query: 162 VKTIYKEMTDNG---LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ M D+G +PN TY +++ +A+ + V++ M +KG++ + Y
Sbjct: 183 ALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTC 242
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ +G E ++ ++M S+ QPD + ++ ++ G+ +EA +F+ ++
Sbjct: 243 LIHGYLSIGKWKEVVQMLQEM-STHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRK 301
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
G +PN+ + L+ Y ++ L+ + G++PD + N+M
Sbjct: 302 GIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHH----IFNIM 348
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + TL+ Y G D L+++ EM G+KP+ I YN ++D + A R K
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EMT++G++ N TY+ +LR + R ++ + +++E++ +++ + NT++A
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 686
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++F + S P + T+S MIT G V EAE MF+ M AG EP+
Sbjct: 687 FQTRRVEEAKDLFASI-SRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745
Query: 284 LFVLTSLIQCYGKAQRTDDVVRA 306
+L +++ + + +++VRA
Sbjct: 746 SRLLNHVVR---ELLKKNEIVRA 765
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 148/310 (47%), Gaps = 24/310 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++T+I + G+ + ++++EM G+ P+++TY++++ + +A+ + +
Sbjct: 220 DVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFL 279
Query: 167 KEMTDNGLSP-NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M + G+ P NW TY +L+ Y ++ + V++EM+ + + V NTL+
Sbjct: 280 RQMVNKGVLPDNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++F+ M + + PD ++++ M+ + +G + + +F+ ML G P+++
Sbjct: 339 YGKIKEARDVFDTM-AMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 397
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE-ELGKLVECV 344
LI+ Y D + N + + G+ P ++ MT +GK+ + +
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPH------VVTYMTVIAALCRIGKMDDAM 451
Query: 345 EKSNSKLG-------YVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVN 397
EK N + Y L++ G K A EL + I + + +D+
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK-AKELISEIMNNGMR------LDIVFF 504
Query: 398 LNLLENACKL 407
+++ N CKL
Sbjct: 505 GSIINNLCKL 514
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 129/307 (42%), Gaps = 18/307 (5%)
Query: 71 GSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G P Y + + S LK K + N R+D F ++I G
Sbjct: 461 GVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA 520
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
N+++ +G+ P+ + YN L+D + + ++ M G+ PN Y +L+
Sbjct: 521 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 580
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + ++ LS++REM +KG++ S LYN ++ + G T A F +M S
Sbjct: 581 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES-GIAM 639
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+S ++ EA +F E+ + ++ L ++I + +R ++
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699
Query: 308 NRLPELGITPDDRFCGCLLNVM-TQTPKEELGKLVECV---------EKSNSKLGYVVKL 357
+ G+ P C ++M T KE L + E + E + L +VV+
Sbjct: 700 ASISRSGLVP----CAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRE 755
Query: 358 LLEEQDI 364
LL++ +I
Sbjct: 756 LLKKNEI 762
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P TY L+D RA RP + ++ GL + + LL+ + A+ ++ L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 199 SVY-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMI 256
+ E G V YN LL + G + +A ++ M + C PD ++++I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G V++A +F EM++ G P+L +S++ KA+ D L ++ G+
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 317 PDD 319
PD+
Sbjct: 289 PDN 291
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 124/279 (44%), Gaps = 12/279 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+ LI+ + T G+ + E+ G++ +++ + ++++ + + R + I+
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ GL P+ Y L+ Y E L V+ M G++ +V Y TL+ +
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 584
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DE +F +M + +P + ++ +I G+ A+ F+EM E+G N
Sbjct: 585 GRIDEGLSLFREM-LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 643
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
+ +++ K + D+ + L + + D ++ M QT + EE L +
Sbjct: 644 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 703
Query: 346 KSN---SKLGYVVKL--LLEEQDIEGDFKKEATELFNSI 379
+S + Y + + LL+E +E EA ++F+S+
Sbjct: 704 RSGLVPCAVTYSIMITNLLKEGLVE-----EAEDMFSSM 737
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 167 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 226
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 227 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 286
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 287 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 341
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 342 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLN 388
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 102 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 161
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 162 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 221
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 222 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 280
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 281 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 314
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K+ G P+++ YN +++ G+AK + +++
Sbjct: 33 DLVLYSNLIELSRKLCDYSKAISIFSRLKSSGFTPDLVAYNAMINVFGKAKLFREARSLI 92
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 93 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 152
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 153 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 211
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 212 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 271
Query: 312 ELGITPD 318
G+ D
Sbjct: 272 SSGVEID 278
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+ +
Sbjct: 2 YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 61
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G +P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 62 SSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFL 121
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+ +L
Sbjct: 122 EALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180
Query: 291 IQCYGKAQ 298
++ YG A+
Sbjct: 181 LRVYGDAE 188
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
TY++L+ +G+ + LS ++M++ + + LY+ L+ + + +A IF +
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
KSS PD +++MI + EA ++ +EM AG PN ++L+ Y + ++
Sbjct: 61 KSS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKK 119
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ + + + E+ D C +++V Q
Sbjct: 120 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 151
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 296 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 355
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E G S
Sbjct: 356 SKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 415
Query: 214 TLYNTLLA 221
++ +L+
Sbjct: 416 EVHFQMLS 423
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 136/272 (50%), Gaps = 23/272 (8%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 243 KANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILFQTMI 302
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 303 XAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 357
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
++ V +I + K ++ +VV +++ LG PD +LN GKL
Sbjct: 358 VKDITVFERMIHLFSKYKKYANVVEVFDKMYGLGYFPDSNVIALVLNA--------YGKL 409
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEA 372
E +K+N ++ +E QD+ F E
Sbjct: 410 HE-FDKAN-------EVYMEMQDVGCVFSDEV 433
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +S L+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 118 PNASSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 238 TLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQI 296
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 297 LFQTMIXAYERAGLVAHAKRLLHELKRPDNIPRD 330
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 14 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 73
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ D S+ EM+ G+ + + Y+ LL M +
Sbjct: 74 SRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNASSYSALLTMYVEN 133
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 134 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 192
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 193 YNTLLRVYGDAE 204
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK +++
Sbjct: 49 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLI 108
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN ++Y++LL Y + + LSV+ EM+E
Sbjct: 109 SEMRTAGVMPNASSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 168
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 169 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 227
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 228 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLR 287
Query: 312 ELGITPD 318
G+ D
Sbjct: 288 TSGVEID 294
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM + LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 2 LFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + +A ++ +EM AG PN
Sbjct: 62 KLCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNA 120
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 SSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 167
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
++ EM+EK + Y+TL+ G D A + M+ + D +S++I +
Sbjct: 2 LFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQ-DRVPGDLVLYSNLIELS 60
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
S+A ++F+ + +GF P+L ++I +GKA+ D ++ + G+ P+
Sbjct: 61 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNA 120
Query: 320 RFCGCLLNVMTQTPK 334
LL + + K
Sbjct: 121 SSYSALLTMYVENKK 135
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 56/129 (43%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++
Sbjct: 312 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLF 371
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ N A +L AYG+ + VY EM++ G S
Sbjct: 372 SKYKKYANVVEVFDKMYGLGYFPDSNVIALVLNAYGKLHEFDKANEVYMEMQDVGCVFSD 431
Query: 214 TLYNTLLAM 222
++ +L++
Sbjct: 432 EVHFQMLSL 440
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 113/214 (52%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +++LI YG G G ++V+EEMK G +P++ITYN+L++ + +R Q
Sbjct: 283 RPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFE 342
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
M GL PN TY++L+ A+ +A + + +M G+Q + Y +L+
Sbjct: 343 YLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANC 402
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G +EAF++ +M+ + + T+++++ G++ EAE +F +L+AG+ N
Sbjct: 403 KIGDLNEAFKLESEMQQA-GVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQ 461
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ TSL Y KA+ + + L + + + PD
Sbjct: 462 QIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPD 495
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L+ +++M G+ P++ TYN ++ + R +++++EM GL P+ TY SL+
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
YG+ +SV+ EMK+ G + V YN+L+ +AFE MK QP
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMK-QRGLQP 354
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+S++I G + EA F +M+ G +PN F TSLI K ++ +
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414
Query: 308 NRLPELGITPDDRFCGCLLNVMTQT 332
+ + + G+ LN++T T
Sbjct: 415 SEMQQAGVN---------LNIVTYT 430
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 5/247 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ F+ +I G+ + +++EEMKA G++P+++TYN+L+D G+
Sbjct: 247 LSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAV 306
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++++EM D G P+ TY SL+ + + MK++G+Q +V Y+TL+
Sbjct: 307 SVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAF 366
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + F DM QP+ +T++S+I G ++EA + +EM +AG N
Sbjct: 367 CKAGMLLEANKFFVDMIRV-GLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLN 425
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+ T+L+ + R + L + G T + + L + + E K ++
Sbjct: 426 IVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMME--KAMDI 483
Query: 344 VEKSNSK 350
+E+ N K
Sbjct: 484 LEEMNKK 490
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W ++ +++L Y A + +++ EEM +KP+++ Y + + R
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM D GL+ N Y +L+ AY + + +++ +EM++ G++++V Y L+
Sbjct: 517 AVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGL 576
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G +A F+ M + QP+ ++++I + EA+ +FNEML+ G P+
Sbjct: 577 CKIGLVQQAVRYFDHM-TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V TSLI K + + NR+ E+G+ D
Sbjct: 636 KLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELD 670
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 4/275 (1%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
F TL + G + + +M V P + + N LL + ++ + + +K+
Sbjct: 182 GVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKD 241
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M GLSP+ TY ++ R E S++ EMK KG++ + YN+L+ VG
Sbjct: 242 MVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGM 301
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVL 287
A +FE+MK + C+PD T++S+I C C+ ++ +A + M + G +PN+
Sbjct: 302 LTGAVSVFEEMKDA-GCEPDVITYNSLIN-CFCKFERIPQAFEYLHGMKQRGLQPNVVTY 359
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK 346
++LI + KA + + + +G+ P++ L++ + E KL +++
Sbjct: 360 STLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQ 419
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+ L V L + E +EA ELF ++ K
Sbjct: 420 AGVNLNIVTYTALLDGLCEDGRMREAEELFGALLK 454
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 167/423 (39%), Gaps = 68/423 (16%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+ +LI G+ + + EM+ GV N++TY LLD + R + +
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRAR-----------------------YG------ 194
++ + G + N Y SL Y +A+ YG
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506
Query: 195 ------EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
ED+++V REM + G+ + +Y TL+ VG T EA + ++M+ +
Sbjct: 507 CRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDL-GIKIT 565
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T+ +I G V +A F+ M G +PN+ + T+LI K ++ N
Sbjct: 566 VVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFN 625
Query: 309 RLPELGITPDDRFCGCLL--NVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEG 366
+ + GI+PD L+ N+ P E L VE +G + L I G
Sbjct: 626 EMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE-----IGMELDLCAYTSLIWG 680
Query: 367 DFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPT 426
+ +L S+ ++ + + D + + LL +L ++ L ++ D+ R
Sbjct: 681 FSRYGQVQLAKSLLDEMLRK--GIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738
Query: 427 QWSLHLKSLSLGAALTALH----------------IWINDLSKALESGEEFPPLLGINTG 470
++ + S A+T LH +++ D+ + SG F PL G
Sbjct: 739 SGTIDITVPSCLTAVTKLHKLCASQSGTDFHRTANLYLADVEEFSHSGMPFSPL-----G 793
Query: 471 HGK 473
H +
Sbjct: 794 HAR 796
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + E+ R + F+ +I +YG A + V+ EMK+IG KPN+ TY L++ R
Sbjct: 270 RMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREG 329
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + +++EM G P+ Y +L+ AY RA + ++ M+ G + YN
Sbjct: 330 LCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYN 389
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G ++A +FE++K P + ++ + G + E + ++ +
Sbjct: 390 ILVDAYGRAGLHEDAEAVFEELK-QRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK 448
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+G P+ F L +++ Y +A R DD+ R + G
Sbjct: 449 SGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG 485
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L++ Y AG+ V EM+ G+ PN YN LD + +A+ + +Y+
Sbjct: 211 DTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQR 270
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M N T+ ++ YG+A+ ++ V+ EMK G + ++ Y L+ A G
Sbjct: 271 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGL 330
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+FE+M+ + + +PD + +++++ S G A +F+ M G EP+
Sbjct: 331 CEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYN 389
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ YG+A +D L + G++P
Sbjct: 390 ILVDAYGRAGLHEDAEAVFEELKQRGMSP 418
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ VY+ MK + N T+ +++ G+AK+P ++ EM G PN TY +L+ A
Sbjct: 265 VEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNA 324
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R E V+ EM++ G + V YN L+ + G A EIF M+ C+P
Sbjct: 325 FAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM-GCEP 383
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVV 304
D +++ ++ G +AEA+F E+ + G P + L+ + G A R ++V+
Sbjct: 384 DRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVM 443
Query: 305 RALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK 346
L++ G+TPD +LN + + +++ +L +E+
Sbjct: 444 AQLHK---SGLTPDTFALNAMLNAYARAGRLDDMERLFAAMER 483
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P++I YN L+++ G+ ++ + ++IY + + P +TYA LLRAY A
Sbjct: 172 RPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEG 231
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
V EM+E G+ + T+YN L T++A E+++ MK E C+ ++ TF+ MI +
Sbjct: 232 VISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK-RERCRANTETFTLMINVY 290
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + +FNEM G +PN+ T+L+ + + + + + G PD
Sbjct: 291 GKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 349
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R D ++ LI+ YG + ++Y + P TY LL A + +
Sbjct: 171 FRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAE 230
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM ++G+ PN Y + L +AR E + VY+ MK + + + + ++ +
Sbjct: 231 GVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVY 290
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ ++F +MKS C+P+ T+++++ + G +AE +F EM +AG EP+
Sbjct: 291 GKAKQPMSSMKVFNEMKSI-GCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 349
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ +L++ Y +A + + +G PD
Sbjct: 350 VYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPD 384
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 37/204 (18%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L+ YG AG + V+EE+K G+ P M ++ LL R+ + + +
Sbjct: 384 DRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVM 443
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ +GL+P+ ++L AY RA +D ++ M+ +G V YN +
Sbjct: 444 AQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRA 502
Query: 227 GYTDE-----------------------------------AFEIFEDMKSSENCQPDSWT 251
GY + E+M + C PD+ T
Sbjct: 503 GYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDA-GCYPDAGT 561
Query: 252 FSSMITICSCRGKVSEAEAMFNEM 275
++ CS +V + A+ M
Sbjct: 562 ARVLLAACSDERQVEQVTAIVRSM 585
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ I +G AGN D + E+KA G+KP+ ++Y +++ + +A R + + ++
Sbjct: 114 DIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 173
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M P Y +++ YG A ED + ++E+G SV +N++L
Sbjct: 174 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK 233
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA +FE MK ++ +P+S T++ +I + G+V EA + +EM A PNL
Sbjct: 234 RKVDEALSLFEVMK--KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ ++ KA++ ++ + + G PD
Sbjct: 292 VNIMVDRLCKARKLEEAYKIFESASQRGCNPD 323
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P +++LI+ + G + V++E+ G KP++ N +D + +A + + I+
Sbjct: 358 NPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 417
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+++ G P+ +Y+ L+ +A +T +++ MK++G L YN ++
Sbjct: 418 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 477
Query: 227 GYTDEAFEIFEDMKSSENC-QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A+EI E+MK E C QP T+ +++ + ++ EA +F E G E N+
Sbjct: 478 GKVHKAYEILEEMK--EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 535
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +SLI +GK R D+ L + + G+TP+ LL+ + + EE+ + + C +
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA--EEINEALVCFQ 593
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 1/184 (0%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ + +P Y L+ + A+RP + + ++M + G + + +L+RA R
Sbjct: 36 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 95
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
D L++ E+K ++ + LYN + G D A + F ++K ++ +PD +++
Sbjct: 96 VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELK-AQGLKPDDVSYT 154
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
SMI + G++ EAE +F +M P + ++I YG A R +D + L RL E
Sbjct: 155 SMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 214
Query: 314 GITP 317
G P
Sbjct: 215 GCIP 218
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 4/246 (1%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRA-RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
+SY + +A + +E S A + + + +D A++ ++ + +G + EE
Sbjct: 430 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 489
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK V+P + TY ++D + + R + +++E G+ N Y+SL+ +G+
Sbjct: 490 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 549
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ + EM +KG+ +V +N+LL +EA F+ MK + C P+++T+S
Sbjct: 550 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK-CPPNTYTYS 608
Query: 254 SMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+I +C + K ++A + +M + G PN+ T++I K D R
Sbjct: 609 ILINGLCRVQ-KYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 667
Query: 313 LGITPD 318
G PD
Sbjct: 668 NGGIPD 673
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +T + AG + ++E++++ G P++ +Y+ L+ + +A + + I+
Sbjct: 393 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 452
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G + + Y +++ + ++ + EMKEK +Q +V Y ++ A +
Sbjct: 453 HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI 512
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA+ +FE+ KS + + + +SS+I G++ EA + EM++ G PN++
Sbjct: 513 DRLDEAYMLFEEAKS-KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 571
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
SL+ KA+ ++ + + E+ P+ L+N + + K
Sbjct: 572 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 619
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+++ ++ +S+LI +G G D + EEM G+ PN+ T+N+LLD + +A+
Sbjct: 525 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 584
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M + PN TY+ L+ R + +++M+++G+ +V Y T
Sbjct: 585 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 644
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+++ A VG +A+ +FE K++ PD+ +F+++I S + EA
Sbjct: 645 MISGLAKVGNITDAYSLFERFKANGGI-PDAASFNALIEGMSNANRAMEA 693
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 110/245 (44%), Gaps = 3/245 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++Y E + PN + ++ A + ++E G P+ +TY +L
Sbjct: 271 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 330
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D +G+ + + ++++M D G + N Y SL+R + ED V++E+ +G
Sbjct: 331 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC 390
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +TL NT + G ++ IFED++S PD ++S +I + G+ E
Sbjct: 391 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY-GFLPDVRSYSILIHGLTKAGQARETS 449
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+F+ M + GF + +++ + K+ + L + E + P G +++ +
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509
Query: 330 TQTPK 334
+ +
Sbjct: 510 AKIDR 514
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 150/327 (45%), Gaps = 21/327 (6%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN+ ++ +I + G + + +EM+ + PN++T N ++D + +A++ +
Sbjct: 251 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 310
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I++ + G +P+ TY SL+ G+ ++ ++ +M + G + +Y +L+
Sbjct: 311 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 370
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++ ++F+++ C+PD ++ + G+V + +F ++ GF P++
Sbjct: 371 IHGRKEDGHKVFKEL-IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 429
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-----EELGK 339
+ LI KA + + + + + G D R +++ ++ K E L +
Sbjct: 430 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 489
Query: 340 LVE-CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF---NSISKDVKKAYCNCLIDLC 395
+ E CV+ + + G +V L + ++ EA LF S ++ + LID
Sbjct: 490 MKEKCVQPTVATYGAIVDGLAKIDRLD-----EAYMLFEEAKSKGIELNVVLYSSLIDGF 544
Query: 396 VNLNLLENACKLLE----LGLTLEVYT 418
+ ++ A +LE GLT VYT
Sbjct: 545 GKVGRIDEAYLILEEMMKKGLTPNVYT 571
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 94/205 (45%), Gaps = 1/205 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R K+R +A++ LI A + L + +M+ +G + + + L+ + R +
Sbjct: 37 RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 96
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ E+ + L P+ Y + +G+A + + E+K +G++ Y ++
Sbjct: 97 ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSM 156
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + G EA E+F M+ +E P ++ +++MI G+ +A + + E G
Sbjct: 157 IWVLCKAGRLGEAEELFAQME-AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 215
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVV 304
P++ S++ C GK ++ D+ +
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEAL 240
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + PN ++ +L+ A + L ++ MK + PN TY+ L++ + R ++
Sbjct: 562 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 621
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +++M GL PN TY +++ + D S++ K G +N L+
Sbjct: 622 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 681
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ EA++ SS +C SW F
Sbjct: 682 EGMSNANRAMEAYQTTVYQLSSSSC---SWNF 710
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 23/323 (7%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEM------KAIGVKPNMITYNNLLD 151
R +K PNA + TL+K GN L +++EM I KP +I+Y+ ++D
Sbjct: 191 RMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + +R + + +++EM G++P +Y SL+ E+ ++ EM +G+Q
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQP 302
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+V +N L+ + G EA ++ E M P+ T++S+I G ++ A +
Sbjct: 303 NVVTFNVLIDVLCKEGKVIEAKDLLEVM-IQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
F M G EP++ T LI Y K + ++ ++ N + ++G PD + G LL + Q
Sbjct: 362 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 421
Query: 332 TPKEELGKLVECVEKSNSKLG--YVVKLLLEEQDIEGDFKKEATELFNSI-SKDVK-KAY 387
K K + V K G Y+ + L G EA ELFN + S ++K
Sbjct: 422 GGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCL-FEAMELFNKLKSYNIKLDIE 480
Query: 388 C-NCLIDLCVNLNLLENACKLLE 409
C NCLID LE A +L E
Sbjct: 481 CFNCLIDGLCKAGKLETAWELFE 503
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 36/249 (14%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN +++LI+ + G+ + ++ M + G +P++I Y L++ + + +
Sbjct: 335 IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAM 394
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+Y M G P+ TY +LL + D ++ MK G+ + +Y L
Sbjct: 395 KLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGL 454
Query: 224 ADVGYTDEAFEIFEDMKS----------------------------------SENCQPDS 249
G EA E+F +KS E QPD
Sbjct: 455 CKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDV 514
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ MI G+V +A +F +M + G P+ +LI+ + ++++ + VV L+
Sbjct: 515 VTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHM 574
Query: 310 LPELGITPD 318
+ + ++ D
Sbjct: 575 MVQRDVSLD 583
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K KSY+ + +D F+ LI AG + ++E++ ++P+++TYN ++
Sbjct: 469 KLKSYNIK-------LDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 521
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
R + + ++++M NG +P+ TYA+L+R + ++ E + + M ++ +
Sbjct: 522 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581
Query: 211 LSVTL 215
L V +
Sbjct: 582 LDVNI 586
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNE 274
+ LL+ A + + + F ++ M+ S PD T + ++ C C +V E A+
Sbjct: 99 FTHLLSGLAKIKHYSQVFYLYNQMRLS-GISPDCCTLNILLN-CLCNVNRVGEGLAVMAG 156
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+L G+ P++ T+LI+ R R+ +LG TP+ G L+ + +T
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRT 214
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 156/326 (47%), Gaps = 23/326 (7%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I G ++++M+ G +PN++TYN L+D++ + K + I+ M
Sbjct: 203 YTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMK 262
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+SP+ TY SL++ R ++ ++ EM + ++ +N L+ G
Sbjct: 263 AKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVS 322
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F+ M + +PD T+SS++ S R ++ EA +F+ M+ G +P+ F L
Sbjct: 323 EAQGVFKTM-TEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNIL 381
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE----- 345
I+ Y KA+R D+ + N + G+TPD+ L++ + Q LG+L E +
Sbjct: 382 IKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQ-----LGRLREAQDLFKNM 436
Query: 346 KSNSKLG--YVVKLLLEEQDIEGDFKKEATELFNSISKDVKK---AYCNCLIDLCVNLNL 400
SN L + +LL+ EG K A LF + K A N LID
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGK-AFRLFRVMQSTYLKPDIAMYNILIDAMCKFGN 495
Query: 401 LENACKLL-EL---GL--TLEVYTDI 420
L++A KL EL GL +++YT I
Sbjct: 496 LKDARKLFSELFVQGLLPNVQIYTTI 521
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 9/216 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D S LI + D +V+ +M +G++P+ +T+N L++ + + + Q +
Sbjct: 129 DIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFF 188
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYREMKEKGMQLSVTLYNTLL-AMC 223
+ +G P TY +++ G + GE T + ++++M+E G Q +V YN L+ ++C
Sbjct: 189 DDFEASGCQPTVYTYTTIIN--GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLC 246
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEP 282
D +EA +IF MK ++ PD +T++S+I +C+ R + EA A+ NEM P
Sbjct: 247 KD-KLVNEALDIFSYMK-AKRISPDIFTYNSLIQGLCNFR-RWKEASALLNEMTSLNIMP 303
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N+F L+ K + + + E+G+ PD
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPD 339
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 7/193 (3%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSP---NWNTYASLLR 186
+++ M G KP+ +YN L+ +AKR + K ++ EM GL+P N+NT L
Sbjct: 362 LFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLC 421
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
GR R +D +++ M G + Y+ LL GY +AF +F M+S+ +
Sbjct: 422 QLGRLREAQD---LFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY-LK 477
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD ++ +I G + +A +F+E+ G PN+ + T++I K D+ + A
Sbjct: 478 PDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEA 537
Query: 307 LNRLPELGITPDD 319
+ G PD+
Sbjct: 538 FRNMEGDGCPPDE 550
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 3/245 (1%)
Query: 89 KLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
KL ++ D + + RI P+ F+ +LI+ + + EM ++ + PN+ T+
Sbjct: 249 KLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTF 308
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+D + + + + + ++K MT+ G+ P+ TY+SL+ Y + ++ M
Sbjct: 309 NVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
KG + YN L+ DEA ++F +M + PD+ ++++I G++
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM-IHQGLTPDNVNYNTLIHGLCQLGRLR 427
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
EA+ +F M G P+LF + L+ + K R + + PD L+
Sbjct: 428 EAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILI 487
Query: 327 NVMTQ 331
+ M +
Sbjct: 488 DAMCK 492
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 105/224 (46%), Gaps = 3/224 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN F+ L+ G V++ M +GV+P+++TY++L+ + +
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEAR 360
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G P+ +Y L++ Y +A+ ++ ++ EM +G+ YNTL+
Sbjct: 361 KLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGL 420
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G EA ++F++M S+ N PD +T+S ++ G + +A +F M +P+
Sbjct: 421 CQLGRLREAQDLFKNMHSNGNL-PDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD 479
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ + LI K D + + L G+ P+ + ++N
Sbjct: 480 IAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIIN 523
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+AFS LIK Y A D ++ EM G+ P+ + YN L+ + + R + + +
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDL 432
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
+K M NG P+ TY+ LL + + Y ++R M+ ++ + +YN L+ AMC
Sbjct: 433 FKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCK 492
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +A ++F ++ + P+ ++++I G + EA F M G P+
Sbjct: 493 -FGNLKDARKLFSEL-FVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDE 550
Query: 285 FVLTSLIQCY 294
F +I+ +
Sbjct: 551 FSYNVIIRGF 560
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 13/311 (4%)
Query: 30 DDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGS-SPKSYIWVNPKSPRAS 88
D+ LS ++ TSL K +V PTK + H K S +P++Y + R
Sbjct: 73 DELLSSFT-TSLSKTTVFQTLRHIKVPTKAFLFFNWIHEKGFSHNPQTYFIMLEILGREK 131
Query: 89 KL---KEKSYDTRAR-NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
L + Y R N + +++ F++LI+ YG AG F + ++E MK IGV P ++
Sbjct: 132 NLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVV 191
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
T+N++L + + R K +Y EM G+ P+ TY L+R + + ++ ++E
Sbjct: 192 TFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKE 251
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCR 262
M V YNTL+ G A + M K ++ PD T++++I +
Sbjct: 252 MTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRK 311
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP-ELGITPDDRF 321
+V EA + EM G +PN+ +LI+ +AQ+ D + L ++ + G PD
Sbjct: 312 QEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPD--- 368
Query: 322 CGCLLNVMTQT 332
C N + +
Sbjct: 369 -ACTFNTLINS 378
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 14/245 (5%)
Query: 71 GSSP-----KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
G SP S + V K R + KE YD + + D ++ LI+ + D
Sbjct: 185 GVSPGVVTFNSVLLVLLKRGRTNMAKE-VYDEMLKTYGVKPDTYTYNILIRGFCKNSMVD 243
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN--GLSPNWNTYAS 183
++EM + P+++TYN L+D + RA + + M+ LSP+ TY +
Sbjct: 244 EGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTT 303
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+R Y R + ++ L + EM +G++ ++ YNTL+ + D+ EI E MK
Sbjct: 304 LIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDG 363
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEM--LEAGFEPNLFVLTSLIQC----YGKA 297
PD+ TF+++I C G + EA +F M LE + + + C YGKA
Sbjct: 364 GSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKA 423
Query: 298 QRTDD 302
+ D
Sbjct: 424 EMLFD 428
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI+ Y D L++ EEM G+KPN++TYN L+ + A++ ++K I
Sbjct: 297 DVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEIL 356
Query: 167 KEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC- 223
++M D G P+ T+ +L+ ++ A ++ V+ MK+ + Y+ L+ +C
Sbjct: 357 EQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQ 416
Query: 224 -ADVGYTDEAF-EIFED--MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
D G + F E+FE + SS +P + ++ M GK +AE + ++++ G
Sbjct: 417 KGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRG 476
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 107/266 (40%), Gaps = 37/266 (13%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKA 136
Y+ N K+ +A ++ R ++ DP ++ +I + G+++ + M
Sbjct: 455 YLCENGKTKKAERV------LRQLMKRGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLR 508
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
P++ Y+ L+D R +P K ++M + P +T+ S+L +
Sbjct: 509 RDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHE 568
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM----------------- 239
+ V M E+ ++ ++ L + D G D+AF+I E +
Sbjct: 569 SAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKNGFCVKMDEVVQFLC 628
Query: 240 ---KSSENCQPDSWTFSSM----ITICS------CR-GKVSEAEAMFNEMLEAGFEPNLF 285
++ E C+ ++ + I +C+ C+ K SEA ++ E+++ G +L
Sbjct: 629 NKRRALEACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYELVDKGLHQDLI 688
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLP 311
L L+ RT++ R+P
Sbjct: 689 CLNDLVAALEAGGRTEEAAFISKRVP 714
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 71 GSSPKSY---IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G +P + I + L +S + + D ++TLI YG G D
Sbjct: 127 GIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDES 186
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ ++EEMK +G +P++ITYN L+++ + K + ++EM D L PN +Y++L+ A
Sbjct: 187 VCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDA 246
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ + + + +M G+ + Y++L+ G EAF + ++M E+
Sbjct: 247 LCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM-LQEHVDL 305
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+++++ G ++EAE +F M +AG PNL T+LI + K + D +
Sbjct: 306 NIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELF 365
Query: 308 NRLPELGITPD 318
N + E I PD
Sbjct: 366 NEMREKDIKPD 376
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 135/299 (45%), Gaps = 25/299 (8%)
Query: 100 RNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R K+R+ P A S + AG D + + +M G+ P + TYN ++ + +
Sbjct: 87 RMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEG 146
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
++++++M GL+P+ TY +L+ YG+ ++++ ++ EMK G + V YN
Sbjct: 147 DMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYN 206
Query: 218 TLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
L+ + C G AFE F +MK ++ +P+ ++S++I G + A F +M
Sbjct: 207 ALINSFCKFKGML-RAFEFFREMK-DKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMT 264
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--- 333
G PN F +SLI KA + + + + + LN++T T
Sbjct: 265 RVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVD---------LNIVTYTTLLD 315
Query: 334 ---KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFK----KEATELFNSI-SKDVK 384
+E + E + ++ K G L I G K +A ELFN + KD+K
Sbjct: 316 GLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIK 374
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 43/283 (15%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + PN A++ LI + + D + ++ EM+ +KP+++ + ++ + +
Sbjct: 335 KAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLE 394
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ K I EM ++G+ N Y +L+ AY +A + +++ EM++ G +++V + L+
Sbjct: 395 ECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALI 454
Query: 221 AMCADVGYTDEAF-----------------------------------EIFEDMKSSENC 245
G EA ++F++M+ +N
Sbjct: 455 DGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQD-KNM 513
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD +++MI G EA M N+M+E G E +L+ TSL+ + + +
Sbjct: 514 IPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARK 573
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
L + GI PD+ C LL ELG + E +E N
Sbjct: 574 FLAEMIGKGIIPDETLCTRLLR-----KHYELGNIDEAIELQN 611
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 6/231 (2%)
Query: 88 SKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
SKL+E K T + +P ++TL+ Y AGN +N+ EEM+ +G + ++T+
Sbjct: 391 SKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTF 450
Query: 147 NNLLDTMGRAKRPWQVKTIY--KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
L+D G KR + IY M D+ L PN Y +L+ + D ++ EM
Sbjct: 451 CALID--GLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEM 508
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++K M Y ++ G EA + M + D + ++S++ S G+
Sbjct: 509 QDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEM-GIELDLYAYTSLVWGLSQCGQ 567
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
V +A EM+ G P+ + T L++ + + D+ + N L E G+
Sbjct: 568 VQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ MT + P + + L +A G+ + +R+M G+ +V YN ++
Sbjct: 85 FLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCK 144
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A +FE MK PD T++++I G + E+ +F EM G EP++
Sbjct: 145 EGDMLTARSLFEQMKKM-GLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVI 203
Query: 286 VLTSLIQCYGK 296
+LI + K
Sbjct: 204 TYNALINSFCK 214
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N++ D ++TLI +G +GN +++EMK + P+ +TY +++ + +A +
Sbjct: 349 KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKV 408
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + ++ EM GL P+ TY +L+ Y +A ++ S++ +M EKG+ +V Y L
Sbjct: 409 VEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTAL 468
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G D A E+ +M S + QP+ T++++I G + +A + EM AG
Sbjct: 469 VDGLCKCGEVDIANELLHEM-SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
F P+ T+++ Y K L + + G+ P L+N
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMN 575
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 24/282 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S ++ Y L + EE++ G+KPN TYN+++ + + R + + +
Sbjct: 286 DVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVL 345
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + + P+ Y +L+ +G++ ++ EMK K + Y +++
Sbjct: 346 RVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQA 405
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F +M S+ +PD T++++I G++ EA ++ N+M+E G PN+
Sbjct: 406 GKVVEARKLFSEM-LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
T+L+ K D L+ + E G+ P+ L+N + + +G + + V+
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCK-----VGNIEQAVK- 518
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYC 388
L+EE D+ G F T + AYC
Sbjct: 519 -----------LMEEMDLAGFFPDTIT------YTTIMDAYC 543
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 47/250 (18%)
Query: 121 AGNFDG---CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPN 177
+ +FDG V+ E +GV N ++YN +L + + + + ++ +M G P+
Sbjct: 227 SNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPD 286
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA----- 232
+Y+ ++ Y + L + E++ KG++ + YN++++ G EA
Sbjct: 287 VVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLR 346
Query: 233 ------------------------------FEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+++F++MK + PD T++SMI
Sbjct: 347 VMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKK-IVPDFVTYTSMIHGLCQA 405
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD---- 318
GKV EA +F+EML G +P+ T+LI Y KA + N++ E G+TP+
Sbjct: 406 GKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTY 465
Query: 319 ----DRFCGC 324
D C C
Sbjct: 466 TALVDGLCKC 475
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 5/226 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI GN + + + EEM G P+ ITY ++D + +
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ + M D GL P T+ L+ + + ED + + M +KG+ + T +N+L+
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEP 282
EI++ M ++ PD+ T++ +I C+ + + EA + EM+E GF
Sbjct: 613 CIRNNMRATIEIYKGM-HAQGVVPDTNTYNILIK-GHCKARNMKEAWFLHKEMVEKGFSL 670
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
SLI+ + K ++ ++ + + G + ++V
Sbjct: 671 TAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 103 KWRID----PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
KW +D PNA F++L+K Y N + +Y+ M A GV P+ TYN L+ +A
Sbjct: 591 KWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + ++KEM + G S +Y SL++ + + + E+ ++ EM+ G +Y
Sbjct: 651 RNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIY 710
Query: 217 NTLLAMCADVGYTDEAFE 234
+ + DV Y + +E
Sbjct: 711 DIFV----DVNYEEGNWE 724
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 3/195 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L+ G D + EM G++PN+ TYN L++ + + Q
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM G P+ TY +++ AY + + R M +KG+Q ++ +N L+
Sbjct: 518 KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++ + + M + P++ TF+S++ R + ++ M G P+
Sbjct: 578 CMSGMLEDGERLIKWM-LDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPD 636
Query: 284 LFVLTSLIQCYGKAQ 298
LI+ + KA+
Sbjct: 637 TNTYNILIKGHCKAR 651
>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 426
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN ++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 109/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+++ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN ++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA IF +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSIFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LS++ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++ M+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNXMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|410110083|gb|AFV61121.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
cujabensis]
Length = 359
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 137 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 196
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 197 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 256
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 257 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 311
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 312 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLN 358
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 72 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 131
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 132 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 191
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 192 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 250
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 284
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 63 SEMKTXGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 181
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 182 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 241
Query: 312 ELGITPD 318
G+ D
Sbjct: 242 SSGVEID 248
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ +I G L +++EMK G+ P +YN+L+ +A R ++K M
Sbjct: 372 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM 431
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+G PN T+ + YG++ + Y MK KG+ V N +L A G
Sbjct: 432 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRL 491
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A +F ++K+ PD+ T++ MI CS K EA +F +M+E P++ + S
Sbjct: 492 GMAKRVFHELKAM-GVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 550
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI KA R D+ R +L E+ + P D LL + + K +E+ L+E + SN
Sbjct: 551 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSN 610
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 108 PNAFSTL--IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ + I YG +G + YE MK+ G+ P+++ N +L + ++ R K +
Sbjct: 438 PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 497
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ G+SP+ TY +++ +A ++ + ++ +M E V N+L+
Sbjct: 498 FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYK 557
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA+ IF +K N +P T+++++ GKV E + EM + + PNL
Sbjct: 558 AGRGDEAWRIFYQLKEM-NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 616
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ C K +D + L + G PD
Sbjct: 617 TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD 649
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S I++ G A FD + +M+ G KP++IT+ L+ + A R
Sbjct: 257 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRI 316
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M + P+ TY +LL +G + + ++ MK G +V Y +
Sbjct: 317 SDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAV 376
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ VG EA E+F++MK + P+ ++++S+I+ + +A +F M G
Sbjct: 377 IDALCQVGRVFEALEMFDEMK-QKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHG 435
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+PN + I YGK+ + ++ + GI PD
Sbjct: 436 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 474
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S L+ +G + + L + EM+A GVKPN+ +Y + +G+AKR + I +M
Sbjct: 233 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 292
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G P+ T+ L++ A D V+ +MK+ + Y TLL D G +
Sbjct: 293 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 352
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EI+ MK ++ + ++++I G+V EA MF+EM + G P + SL
Sbjct: 353 SVMEIWNAMK-ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 411
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I + KA R D + + G P+
Sbjct: 412 ISGFLKADRFGDALELFKHMDIHGPKPN 439
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ + G G MK G+ N TYN L+ + ++ + +Y+ M
Sbjct: 163 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 222
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ TY+ L+ A+G+ R E L + REM+ G++ +V Y + + D
Sbjct: 223 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFD 282
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+ I M+ +E C+PD T + +I + G++S+A+ +F +M ++ +P+ +L
Sbjct: 283 EAYRILAKME-NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 341
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +G + V+ N + G + +++ + Q +G++ E +E
Sbjct: 342 LDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQ-----VGRVFEALE 391
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 1/191 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L VY M GV P++ TY+ L+ G+ + V + +EM +G+ PN +Y +R
Sbjct: 215 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 274
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
G+A+ ++ + +M+ +G + V + L+ + D G +A ++F MK S+ +P
Sbjct: 275 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ-KP 333
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T+ +++ G ++N M G+ N+ T++I + R + +
Sbjct: 334 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 393
Query: 308 NRLPELGITPD 318
+ + + GI P+
Sbjct: 394 DEMKQKGIVPE 404
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
++ K+ GV YN+L+ + + ++ EM + G P+ TY LL A G++
Sbjct: 779 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 838
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
E+ L V EM KG + + YNT+++ ++A +++ ++ S + P T
Sbjct: 839 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS-QGFSPTPCT 897
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+ ++ G++ +AE +FNEMLE G + N + L+ + A T+ V +
Sbjct: 898 YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV 957
Query: 312 ELGITPD 318
+ GI PD
Sbjct: 958 DQGINPD 964
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 34/256 (13%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
+ NE + D + LI++ AG +V+ +MK KP+ +TY LLD G
Sbjct: 289 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 348
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
V I+ M +G + N Y +++ A + + L ++ EMK+KG+ Y
Sbjct: 349 GDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSY 408
Query: 217 NTLLAMCADVGYTDEAFEIFEDM--------------------KSSENCQ---------- 246
N+L++ +A E+F+ M KS E+ +
Sbjct: 409 NSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKS 468
Query: 247 ----PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
PD ++++ + G++ A+ +F+E+ G P+ T +I+C KA + D+
Sbjct: 469 KGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDE 528
Query: 303 VVRALNRLPELGITPD 318
V+ + E PD
Sbjct: 529 AVKIFYDMIENNCVPD 544
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ G + + L V EEM G + +TYN ++ + +++R Q +Y
Sbjct: 824 DEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLY 883
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G SP TY LL +A ED +++ EM E G + + T+YN LL
Sbjct: 884 YNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIA 943
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G T++ +F+DM + PD +++ +I
Sbjct: 944 GNTEKVCHLFQDM-VDQGINPDIKSYTIII 972
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++ EMK +G P+ TYN LLD MG++ R ++ + +EM G + TY +++
Sbjct: 811 GLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGL 870
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
++R E + +Y + +G + Y LL G ++A +F +M C+ +
Sbjct: 871 VKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEY-GCKAN 929
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
++ ++ G + +F +M++ G P++ T +I
Sbjct: 930 CTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 134/303 (44%), Gaps = 7/303 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +IK A FD + ++ +M P+++ N+L+DT+ +A R + I+
Sbjct: 509 DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIF 568
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ + L P TY +LL GR ++ + + EM ++ YNT+L
Sbjct: 569 YQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKN 628
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A ++ M +++ C PD +++++I + +EA ++F +M + P+
Sbjct: 629 GAVNDALDMLYSM-TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYAT 686
Query: 287 LTSLIQCYGKAQRTDDVVRAL-NRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECV 344
L +++ + K + + + + + G D C L+ ++ + E+ + E +
Sbjct: 687 LCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEII 746
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATEL---FNSISKDVKKAYCNCLIDLCVNLNLL 401
S L L + + EA EL F S +K N LI V+ NL+
Sbjct: 747 ASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLI 806
Query: 402 ENA 404
+ A
Sbjct: 807 DIA 809
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 15/193 (7%)
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
++ K G+ L LYN+L+ D D A +F +MK C PD +T++ ++
Sbjct: 779 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAMGK 837
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
++ E + EM G+E ++I K++R + + L G +P
Sbjct: 838 SMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCT 897
Query: 322 CGCLLNVMTQTPKEE-----LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF 376
G LL+ + + + E +++E K+N + +LL I G+ +K LF
Sbjct: 898 YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT---IYNILLNGHRIAGNTEK-VCHLF 953
Query: 377 -----NSISKDVK 384
I+ D+K
Sbjct: 954 QDMVDQGINPDIK 966
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 93 KSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K+ D EK +DP+ F+TLI YGTAG + C V +M+ G+K ++I++ +++
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 481
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ + + I +M ++PN Y S++ AY + E + +MK G+
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 541
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
S+ YN LL DEA E+ +++ + +PD +++++I+ C +G +A
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRN-QGLRPDVVSYNTIISACCNKGDTDKALE 600
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ EM + G P L +L+ A R D+ ++ + P G +++
Sbjct: 601 LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 657
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 45/278 (16%)
Query: 78 IWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMK 135
+W + K A K+ ++ D + PN ++T+I + G+ + + ++M
Sbjct: 204 LWRSGKGSDALKVFDEMVD-------MGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
G KPN++TYN LL + RA R + + + EM + + P+ TY+ L R
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316
Query: 196 DTLSVYREMKEKGMQL-----------------------------------SVTLYNTLL 220
LS++ E +KG+ L + +YNTL+
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
V AF IFE MK S + +PD T++++I V++AE + EM ++G
Sbjct: 377 NGYCQVRDLRGAFCIFEQMK-SRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 435
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P++ +LI YG A + + L+ + + GI D
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y + G ++E+MK+ ++P+ ITYN L++ + + + + + + EM
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ T+ +L+ AYG A E +V +M++KG++ V + +++ G
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA I +DM ++ P++ ++S+I G +A + +M +G ++ L
Sbjct: 492 EAVAILDDM-IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 550
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
++ ++ + D+ + L G+ PD
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPD 578
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKP-NMITYNNLLDTMGRAKRPWQV 162
R D A++ +++ AG+ D L + M ++ G P + +YN ++ + R+ +
Sbjct: 154 RPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 213
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ EM D G+ PNW TY +++ + + E + +M G + ++ YN LL+
Sbjct: 214 LKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSG 273
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G DE + ++M +S + PD +T+S + + G+ ++F E L+ G
Sbjct: 274 LCRAGRMDETRVLMDEM-ASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML 332
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ + L+ K + + L L G+ P L+N Q
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQV 382
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN+ R D +++T+I G+ D L + +EM G++P + TY+ L+ + A R
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 630
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
++ +Y++M + P+ + Y ++ AY R S+ +EM EKG+ T
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685
>gi|255661170|gb|ACU25754.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 426
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVVVFDKMRGLGYFPDSNVIALVLN 398
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 115/226 (50%), Gaps = 11/226 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ P S +I++ G A + ++ ++KA +P YN+++ + + +V +
Sbjct: 157 VTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL 216
Query: 166 YKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
Y EM++ G P+ TY++L+ A+ + + + + EMKE GMQ + +Y ++++
Sbjct: 217 YNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFF 276
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ A +FE+M+ C+PD +T++ +I G++ EA ++EM +P+
Sbjct: 277 KLDNVHGALSLFEEMRYM-YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDT 335
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
V+ ++I GKA R DD L E+G++ C+ NV+T
Sbjct: 336 VVMNNMINFLGKAGRLDD---GLKLFEEMGVS------HCIPNVVT 372
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 1/192 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A +D +++E+K + Y ++ +G+A R ++
Sbjct: 441 PAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFD 500
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM+ G +PN Y +L+ RA ++ L+ R+M+E G + YN +L A G
Sbjct: 501 EMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTG 560
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+ +MK+S +PD+ +++++++ S G EA + EM GFE +L
Sbjct: 561 GPHRAMEMLTNMKNS-TIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITY 619
Query: 288 TSLIQCYGKAQR 299
+S+++ GK +
Sbjct: 620 SSILEAIGKVDQ 631
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 39/265 (14%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA-------- 156
R D ++ LI+ G AG D + Y EM+ KP+ + NN+++ +G+A
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLK 356
Query: 157 ----------------------------KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
R +V + ++ M +G+SP+ TY+ L+ +
Sbjct: 357 LFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGF 416
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ E + + EM EKG Y +L+ D A E+F+++K ENC
Sbjct: 417 CKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK--ENCGSS 474
Query: 249 SW-TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
S ++ MI G++ +A +F+EM + G PN++ +L+ +A D+ + +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTM 534
Query: 308 NRLPELGITPDDRFCGCLLNVMTQT 332
++ E G PD +LN + +T
Sbjct: 535 RKMQEHGCLPDINSYNIILNGLAKT 559
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 121/278 (43%), Gaps = 5/278 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + G D + + EMK G++P Y ++ + +++
Sbjct: 229 DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLF 288
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM P+ TY L+R G+A ++ Y EM+ + + + N ++
Sbjct: 289 EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKA 348
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+ ++FE+M S +C P+ T++++I + + +VSE + F M +G P+ F
Sbjct: 349 GRLDDGLKLFEEMGVS-HCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPF 407
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG--KLVEC 343
+ LI + K R + + L + E G P L++ + + + +L E
Sbjct: 408 TYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
E S V ++++ G +A LF+ +SK
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRL-DDAINLFDEMSK 504
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 150/361 (41%), Gaps = 41/361 (11%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTM 153
Y +AR K + A++++I + G ++ +Y EM G P+ +TY+ L+
Sbjct: 183 YQIKAR--KCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAF 240
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ R + EM +NG+ P Y ++ + + LS++ EM+ + V
Sbjct: 241 CKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDV 300
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
Y L+ G DEA+ + +M+ E+C+PD+ ++MI G++ + +F
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFYHEMQ-REDCKPDTVVMNNMINFLGKAGRLDDGLKLFE 359
Query: 274 EMLEAGFEPNLFVLTSLIQC-YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
EM + PN+ ++I+ + R +V R+ GI+P L++ +T
Sbjct: 360 EMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKT 419
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI 392
+ +EK+ +LLEE D +G AYC+ LI
Sbjct: 420 NR---------IEKA--------MMLLEEMDEKG-------------FPPCPAAYCS-LI 448
Query: 393 DLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLS 452
D + AC+L + E+ + S S +++ +K L L +++S
Sbjct: 449 DALGKAKRYDLACELFQ-----ELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMS 503
Query: 453 K 453
K
Sbjct: 504 K 504
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 108 PNA--FSTLIK-LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
PN ++T+IK L+ + + +E MK G+ P+ TY+ L+D + R +
Sbjct: 368 PNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMM 427
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +EM + G P Y SL+ A G+A+ + +++E+KE S +Y ++
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D+A +F++M S C P+ + ++++++ + + EA +M E G P++
Sbjct: 488 KAGRLDDAINLFDEM-SKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDI 546
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ K + L + I PD
Sbjct: 547 NSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPD 580
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ ++R G A+ ++++ ++K + Q + YN+++ M G ++ E++ +M +
Sbjct: 163 SQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN 222
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+C PD+ T+S++I+ G+ A + NEM E G +P + T +I + K D
Sbjct: 223 EGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFK---LD 279
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+V AL+ E+ R+ C +V T T
Sbjct: 280 NVHGALSLFEEM------RYMYCRPDVFTYT 304
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 69 KTGSSPKSYIWVNPKS--PRASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFD 125
K G +P Y + S RA L E R E + D N+++ ++ G
Sbjct: 504 KLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPH 563
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + MK +KP+ ++YN +L + A + + KEM G + TY+S+L
Sbjct: 564 RAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSIL 623
Query: 186 RAYGRA 191
A G+
Sbjct: 624 EAIGKV 629
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 302
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 303 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 357
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 358 VKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLN 404
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 118 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 238 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 296
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 330
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 14 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIF 73
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 74 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN 133
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 134 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 192
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 193 YNTLLRVYGDAE 204
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 49 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 108
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 109 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 168
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 169 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 227
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 228 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 287
Query: 312 ELGITPD 318
G+ D
Sbjct: 288 SSGVEID 294
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 2 LFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 61
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 62 KLCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 167
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 57/128 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 312 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 371
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G S
Sbjct: 372 SKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 431
Query: 214 TLYNTLLA 221
++ +L+
Sbjct: 432 EVHFQMLS 439
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++++ Y G+ L V++ +K G++P +++YN+LL + +A++ + + EM
Sbjct: 414 YTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEML 473
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
NG+ PN +Y +L Y RA E +++ MK++ + + + Y LL C G
Sbjct: 474 ANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQ 533
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+F+ + + + + T+ +M+ + +G++S+A + +M + GF + TS
Sbjct: 534 RAVEVFQQITDA-GLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSF 592
Query: 291 IQCYGKAQRTDDVVRALNRLPE 312
I+ ++ T++V L + E
Sbjct: 593 IKACFRSGDTEEVTETLAVMRE 614
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
AGN+ +N ++ + KP + Y L+D R + ++ M + + PN +
Sbjct: 113 AGNWHKIVNAFQVID----KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHI 168
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y SL+ AY AR E ++ EM +G+QL+ ++ ++++ A G + A FE K
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 228
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+EN P ++S++ G + EA+ +M E GF+ NL + T+++ + + +
Sbjct: 229 -AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDE 287
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ + +RL G++P GC++ + T+
Sbjct: 288 EKCLSFFHRLKACGLSPTAATYGCIVKLFTKA 319
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 3/223 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P A + ++KL+ AGN L++ EEM GV PN + Y ++D R
Sbjct: 302 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 361
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++++M GL P+ TY L+ A+ +A + L V ++ + ++ Y ++L
Sbjct: 362 KVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGY 421
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G+ +A E+F+ +K++ +P +++S+++ + ++ A M +EML G PN
Sbjct: 422 VKGGHIQKALEVFDRIKTA-GLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPN 480
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
T+L + Y +A + R+ + + D G LL
Sbjct: 481 ERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALL 523
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 93 KSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K+ D +K + PN ++ ++ Y G+F V+E+M + G+KP+++TYN L+
Sbjct: 324 KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILV 383
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+A R + + + + N L P TY S+L Y + + + L V+ +K G++
Sbjct: 384 HAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLR 443
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
V YN+LL+ A + A + ++M ++ P+ +++++ + G V +A
Sbjct: 444 PGVVSYNSLLSGLAKARQMENARLMLDEMLAN-GVVPNERSYTALTEGYARAGDVEKAFG 502
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
MF M + ++ +L++ K+ V ++ + G+
Sbjct: 503 MFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGL 547
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+++ F ++I Y +AGN + + +E+ KA + P I YN+++ +A V+
Sbjct: 198 QLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEA 257
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +M + G N Y ++L + R E LS + +K G+ + Y ++ +
Sbjct: 258 LLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFT 317
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +A +I E+M P+ ++ ++ + G + A ++ +M+ AG +P++
Sbjct: 318 KAGNMAKALDILEEM-DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 376
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ + KA R D + L + + P
Sbjct: 377 VTYNILVHAFCKAGRMDKALGVLENIQANRLLP 409
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 97 TRARNEKWR---IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
RA E R I PN +++LI Y A + +G + EEM + G++ N + +++
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 209
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
A + +++ L P Y S+++AY +A E ++ +M+E+G Q
Sbjct: 210 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 269
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ LY T+L A++ ++ F +K+ P + T+ ++ + + G +++A +
Sbjct: 270 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKAC-GLSPTAATYGCIVKLFTKAGNMAKALDI 328
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EM + G PN + ++ Y + + + G+ PD
Sbjct: 329 LEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 375
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYE 132
+SY + RA + EK++ R + E ID A+ L+K +G + V++
Sbjct: 482 RSYTALTEGYARAGDV-EKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQ 540
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
++ G+K N ITY +LD R + + + K+M +G + Y S ++A R+
Sbjct: 541 QITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSG 600
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
E+ M+EK ++++ Y TL+ D+A +E K+S Q DS
Sbjct: 601 DTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKAS-GLQLDS 656
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ L + Y AG+ + +++ MK + +++ Y LL ++ +
Sbjct: 477 VVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAV 536
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++++TD GL N TY ++L + R + ++M++ G L Y + + C
Sbjct: 537 EVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKAC 596
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G T+E E M+ + + ++ T++++I
Sbjct: 597 FRSGDTEEVTETLAVMR-EKKLEVNARTYTTLI 628
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 132/271 (48%), Gaps = 8/271 (2%)
Query: 73 SPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNV 130
S S IWV K+ R + +E A+ E R P A++ T+I YG+AG F+ +
Sbjct: 20 SYTSMIWVLCKAGRLGEAEE----LFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKL 75
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
E ++ G P+++++N++L +G+ ++ + ++++ M + PN +TY ++
Sbjct: 76 LERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCL 134
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
E+ + EM+ + ++ N ++ +EA++IFE S C PD
Sbjct: 135 GGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES-ASQRGCNPDCV 193
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+ S+I +G+V EA +F +ML+AG N V TSLI+ + R +D + L
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
G PD ++ + + + E G+++
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 284
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P +++LI+ + G + +++E+ G KP++ N +D + +A + + I+
Sbjct: 226 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 285
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+++ G P+ +Y+ L+ +A +T +++ MK++G L YN ++
Sbjct: 286 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 345
Query: 227 GYTDEAFEIFEDMKSSENC-QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A+EI E+MK E C QP T+ +++ + ++ EA +F E G E N+
Sbjct: 346 GKVHKAYEILEEMK--EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +SLI +GK R D+ L + + G+TP+ LL+ + + EE+ + + C +
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA--EEINEALVCFQ 461
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 4/246 (1%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRA-RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
+SY + +A + +E S A + + + +D A++ ++ + +G + EE
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 357
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK V+P + TY ++D + + R + +++E G+ N Y+SL+ +G+
Sbjct: 358 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 417
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ + EM +KG+ +V +N+LL +EA F+ MK + C P+++T+S
Sbjct: 418 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMK-CPPNTYTYS 476
Query: 254 SMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+I +C + K ++A + +M + G PN+ T++I K D R
Sbjct: 477 ILINGLCRVQ-KYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 535
Query: 313 LGITPD 318
G PD
Sbjct: 536 NGGIPD 541
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 96/188 (51%), Gaps = 2/188 (1%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ E+KA G+KP+ ++Y +++ + +A R + + ++ +M P Y +++ YG
Sbjct: 6 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
A ED + ++E+G SV +N++L DEA +FE MK ++ +P+S
Sbjct: 66 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK--KDAEPNSS 123
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++ +I + G+V EA + +EM A PNL + ++ KA++ ++ +
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183
Query: 311 PELGITPD 318
+ G PD
Sbjct: 184 SQRGCNPD 191
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +T + AG + ++E++++ G P++ +Y+ L+ + +A + + I+
Sbjct: 261 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 320
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G + + Y +++ + ++ + EMKEK +Q +V Y ++ A +
Sbjct: 321 HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI 380
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA+ +FE+ KS + + + +SS+I G++ EA + EM++ G PN++
Sbjct: 381 DRLDEAYMLFEEAKS-KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 439
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
SL+ KA+ ++ + + E+ P+ L+N + + K
Sbjct: 440 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 487
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+++ ++ +S+LI +G G D + EEM G+ PN+ T+N+LLD + +A+
Sbjct: 393 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 452
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M + PN TY+ L+ R + +++M+++G+ +V Y T
Sbjct: 453 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 512
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+++ A VG +A+ +FE K++ PD+ +F+++I S + EA
Sbjct: 513 MISGLAKVGNITDAYSLFERFKANGGI-PDAASFNALIEGMSNANRAMEA 561
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 110/245 (44%), Gaps = 3/245 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++Y E + PN + ++ A + ++E G P+ +TY +L
Sbjct: 139 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 198
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D +G+ + + ++++M D G + N Y SL+R + ED +++E+ +G
Sbjct: 199 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 258
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +TL NT + G ++ IFED++S PD ++S +I + G+ E
Sbjct: 259 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY-GFLPDVRSYSILIHGLTKAGQARETS 317
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+F+ M + GF + +++ + K+ + L + E + P G +++ +
Sbjct: 318 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 377
Query: 330 TQTPK 334
+ +
Sbjct: 378 AKIDR 382
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 150/327 (45%), Gaps = 21/327 (6%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN+ ++ +I + G + + +EM+ + PN++T N ++D + +A++ +
Sbjct: 119 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 178
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I++ + G +P+ TY SL+ G+ ++ ++ +M + G + +Y +L+
Sbjct: 179 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 238
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++ +IF+++ C+PD ++ + G+V + +F ++ GF P++
Sbjct: 239 IHGRKEDGHKIFKEL-IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 297
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-----EELGK 339
+ LI KA + + + + + G D R +++ ++ K E L +
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 357
Query: 340 LVE-CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF---NSISKDVKKAYCNCLIDLC 395
+ E CV+ + + G +V L + ++ EA LF S ++ + LID
Sbjct: 358 MKEKCVQPTVATYGAIVDGLAKIDRLD-----EAYMLFEEAKSKGIELNVVLYSSLIDGF 412
Query: 396 VNLNLLENACKLLE----LGLTLEVYT 418
+ ++ A +LE GLT VYT
Sbjct: 413 GKVGRIDEAYLILEEMMKKGLTPNVYT 439
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ +L+ A + L ++ MK + PN TY+ L++ + R ++ +
Sbjct: 433 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 492
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++M GL PN TY +++ + D S++ K G +N L+
Sbjct: 493 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 552
Query: 224 ADVGYTDEAFE 234
++ EA++
Sbjct: 553 SNANRAMEAYQ 563
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 96/178 (53%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P +TYN+L+ + +A+R + + +EM +G P+ TY +L+ + +++ +D L V
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ ++ +G + V Y+ L+ G EA ++F M S +C P++ T++S+I+
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GK+ EA + M E G P++ T+L+ + K R DD LN++ G+TP+
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPN 229
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 15/226 (6%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++LI + G D +N+ E M G P+++TY L++ + R +
Sbjct: 158 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 217
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+MT GL+PN T+ SL+ R D + + EM+ K +V YNT+L
Sbjct: 218 LNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 277
Query: 226 VGYTDEAFE-IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
V +EA + + E+M +C P+ +F+ MI + SEA + E P++
Sbjct: 278 VNQLEEARKFMLEEM----DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 333
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+ T++I + ++ D+ R ++ E P GCL N +T
Sbjct: 334 VMYTTVIDVLCREKKVDEACRVYRKMLE---EP-----GCLPNSIT 371
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + + D L V+E++ A G +P+++TY+ L+D + + R + ++
Sbjct: 88 DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF 147
Query: 167 KEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M +G PN TY SL+ + R ++ +++ M E G V Y TL+
Sbjct: 148 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ D+A+++ M + + P+ TF+S++ ++S+A + EM P ++
Sbjct: 208 LARLDDAYDLLNQM-TRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVY 266
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ Y + + ++ + + L E+ P+
Sbjct: 267 TYNTILDGYCRVNQLEEARKFM--LEEMDCPPN 297
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++ EEM G P++ TY L+ ++K+ +++++ G P+ TY+ L+
Sbjct: 75 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 134
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTL-YNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ ++ + ++ M + G + T+ YN+L++ +G DEA + E M + + P
Sbjct: 135 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS-SP 193
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T+++++ ++ +A + N+M G PN+ TSL+ + R D V L
Sbjct: 194 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHIL 253
Query: 308 NRLPELGITP 317
+ +P
Sbjct: 254 GEMRRKSCSP 263
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 105/234 (44%), Gaps = 8/234 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+R D +S LI G ++++ M K+ PN +TYN+L+ R + +
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 179
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-A 221
+ + M + G SP+ TY +L+ + + +D + +M KG+ +V + +L+
Sbjct: 180 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDG 239
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGF 280
+C + +D A I +M+ ++C P +T++ TI +V++ E ML E
Sbjct: 240 LCRENRLSD-AVHILGEMR-RKSCSPTVYTYN---TILDGYCRVNQLEEARKFMLEEMDC 294
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
PN+ +I+ K R+ + + + PD +++V+ + K
Sbjct: 295 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 7/191 (3%)
Query: 68 GKTGSSPK--SYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGN 123
+TGSSP +Y + + ++L + +YD + + + PN F++L+
Sbjct: 187 AETGSSPDVVTYTTLMNGFCKLARLDD-AYDLLNQMTRKGLTPNVVTFTSLMDGLCRENR 245
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+++ EM+ P + TYN +LD R + + + E D PN ++
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFNI 303
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
++R + + + + E + + V +Y T++ + DEA ++ M
Sbjct: 304 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEP 363
Query: 244 NCQPDSWTFSS 254
C P+S T+S+
Sbjct: 364 GCLPNSITYST 374
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P + T++S+I+ + SEA + EM+ +G P++F T+LI + K++++DD +R
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+L G PD CL++ + + G+L E ++
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKE-----GRLKEAID 145
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 191/451 (42%), Gaps = 45/451 (9%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++T++ +Y G FD + +EM++ G+K +++TYN LL GR +V+ +
Sbjct: 387 VDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRL 446
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM + PN TY++++ Y + ++ + VY++ K+ +++ V Y +++
Sbjct: 447 FEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCK 506
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC------------SCRGKVSEAEAMFN 273
G + + + M + +P+ TF+S+I S + E + +
Sbjct: 507 NGLVESSIMLLIAM-IEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAVEYPTEQLSS 565
Query: 274 EMLEAGFE-----PNLFVLTSLIQCYGKAQRTDD---------VVRALNRLPELGITPDD 319
+++ F+ + + + R D ++ ++ EL I P+
Sbjct: 566 MLIDGAFQNKTGDDRILKMFEQLAAEKAGHREKDRKGRQDQHCILWLFQKMHELNIKPNV 625
Query: 320 RFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNS 378
+LN ++ E+ L+ + ++++ V LL + F +A LF+
Sbjct: 626 VTFSAILNACSRCNSFEDASMLLGALRLFDNQVYGVTHGLLMGYREQVWF--QAQTLFDE 683
Query: 379 ISK---DVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWS---LHL 432
+ + A+ N L D+ A ++ G V+ +WS L L
Sbjct: 684 MRRMDSSTASAFYNALTDMLWQFGQRRGAEMVVTEGRRRNVWKG-------EWSISCLDL 736
Query: 433 KSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK--YSDKGLASVFESHLK 490
+S GAA +H W+ ++ L G E P ++ I TG GKH D L E+ L
Sbjct: 737 HLMSCGAACAMVHSWLLNMHSTLFEGSELPKIVTILTGWGKHSKVMGDGTLKRAVEALLN 796
Query: 491 ELNAPFHDSPDKVGWFLTTEAAAKSWLESRS 521
+ +PF + +G + + +WL S
Sbjct: 797 GMGSPFRIAEGNLGRYYSPGNLLATWLRQPS 827
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 153/342 (44%), Gaps = 26/342 (7%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT-IYKE 168
+FS +I YG G+F ++++ M++ GV PN+I+YN+L+D + + + V + E
Sbjct: 215 SFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDE 274
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ P+ TY SLL E + EM +KG+ YNT L G
Sbjct: 275 MLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQ 334
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A + E+M SS P T+S+MI C+ + +A ++ EM +
Sbjct: 335 IDLARRVLEEM-SSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYN 393
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKS 347
+++ Y K R D+ + + G+ D LL+ + +E+ +L E ++
Sbjct: 394 TMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAW 453
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKA--------YCNCLIDLCVNLN 399
N + + + +G +EA +++ KD KKA Y + + LC N
Sbjct: 454 NIYPNTLTYSTMIDVYTKGGMFQEAMDVY----KDFKKAQLEVDVVFYTSIIDSLCKN-G 508
Query: 400 LLENACKLL----ELGLTLEVYT-----DIQSRSPT-QWSLH 431
L+E++ LL E G+ V T D +SPT ++ +H
Sbjct: 509 LVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVH 550
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 36/267 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+ + + G ++ + EM G+ + TYN LDT+ + + + +
Sbjct: 283 DRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVL 342
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK------------------- 207
+EM+ + P TY++++ +A ED L++Y EMK +
Sbjct: 343 EEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKL 402
Query: 208 ----------------GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
GM+ V YN LL+ G DE +FE+MK + N P++ T
Sbjct: 403 GRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMK-AWNIYPNTLT 461
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+S+MI + + G EA ++ + +A E ++ TS+I K + + L +
Sbjct: 462 YSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMI 521
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEELG 338
E GI P+ +++ Q+P E G
Sbjct: 522 EKGIKPNVVTFNSIIDASRQSPTLEYG 548
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 6/210 (2%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
K+ G L +T++ +G + A +FE + E ++FS+MI+ G
Sbjct: 170 KQNGRIAKGKLVSTMIGTLGRLGEINHALRLFESARL-EGHGNTVYSFSAMISAYGRNGH 228
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT-DDVVRALNRLPELGITPDDRFCG 323
S+A +F M G PNL SLI K + D VV+ + + GI PD
Sbjct: 229 FSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYN 288
Query: 324 CLLNVMTQTPKEELGK--LVECVEKSNSKLGYVVKLLLEEQDIEG--DFKKEATELFNSI 379
LL+V E + L E +K + + L+ G D + E +S
Sbjct: 289 SLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSR 348
Query: 380 SKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
+ +ID C NLLE+A L E
Sbjct: 349 RVWPTVVTYSTMIDGCAKANLLEDALNLYE 378
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV + + LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALVLN 398
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 173 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + + +
Sbjct: 233 LEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++P+ +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVTPDTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG P+ ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 115 IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGL 174
I + AG + V+ + G ++ + ++ + K+ V ++ EM G
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGY 386
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
P+ N A +L AYG+ + VY EM+E G
Sbjct: 387 FPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVG 420
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ ++ G + + L V EM G + +TYN ++ + ++KR Q +Y
Sbjct: 807 DEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLY 866
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G SP TY LL +A D +++ EM E G + + T+YN LL
Sbjct: 867 YNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIA 926
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T+ +IFE M + PD +++ +I G++++ + F ++LE G EP+L +
Sbjct: 927 GNTENVCQIFEKM-VEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLII 985
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI GK++R ++ V N + + GI P+
Sbjct: 986 YNLLIDGLGKSERIEEAVCLFNEMKKKGIVPN 1017
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 108 PNAFSTL--IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ + I YG +G + YE MK+ G+ P++ N +L ++ R+ R K +
Sbjct: 421 PNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRV 480
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ D G+SP+ TY +++ +A ++ ++ + +M E G V N+L+
Sbjct: 481 FYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYK 540
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA+++F +K + +P + T++++++ GKV E + EM + PNL
Sbjct: 541 GGKGNEAWKLFHQLKEMK-IEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLI 599
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ C K + + L + E G TPD
Sbjct: 600 TYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPD 632
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 2/234 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ ++ G D L V++EMK G+ P +YN+L+ +A + ++ M
Sbjct: 355 SYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHM 414
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G SPN T+ + YG++ + Y MK KG+ V N +L+ A G
Sbjct: 415 NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRL 474
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A +F ++K PD+ T++ MI CS K EA F++M+E G P++ L S
Sbjct: 475 GMAKRVFYELKDM-GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNS 533
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
LI K + ++ + ++L E+ I P + LL+ + + K +E+ L+E
Sbjct: 534 LIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLE 587
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 106/206 (51%), Gaps = 6/206 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI TAG + L+ + ++ +G++P++I YN L+D +G+++R + ++
Sbjct: 947 DIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLF 1006
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN TY SL+ G+A + +Y E+ KG + +V YN L+ +
Sbjct: 1007 NEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVS 1066
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G TD A+ ++ + + + +++I+ ++ AE +F EM G P+ F
Sbjct: 1067 GSTDNAYAAYDCVAVGVSLK------TALISGLVDENLINIAEGLFAEMKRRGCGPDQFT 1120
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPE 312
++ GK+ R +++++ + E
Sbjct: 1121 YNLILDAIGKSMRIEEMLKVQEEIAE 1146
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 3/242 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S I++ G A FD + +M+ G KP+++T+ ++ + A R
Sbjct: 240 EARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRL 299
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M + P+ TY +LL G + + + ++ M G ++ Y +
Sbjct: 300 SDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAV 359
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ VG DEA +F++MK + P+ ++++S+I+ A +FN M G
Sbjct: 360 VDALCQVGRLDEALAVFDEMK-EKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACG 418
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
PN + I YGK+ ++ ++ + GI PD +L+ + ++ + + K
Sbjct: 419 PSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAK 478
Query: 340 LV 341
V
Sbjct: 479 RV 480
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 12/258 (4%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++ + K +GV +YN+L+ + + ++ EM G P+ TY +L A G
Sbjct: 760 LFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMG 819
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++ E+ L V EM KG + + YNT+++ ++A +++ ++ S E P
Sbjct: 820 KSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS-EGFSPTP 878
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T+ ++ GK+ +AE +FNEMLE G +PN + L+ + A T++V + +
Sbjct: 879 CTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEK 938
Query: 310 LPELGITPDDRFCGCLLNVMTQTPK--EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGD 367
+ E GI PD + L++ + + + L + +E LG L++ I+G
Sbjct: 939 MVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLE-----LGLEPDLIIYNLLIDGL 993
Query: 368 FKKEATE----LFNSISK 381
K E E LFN + K
Sbjct: 994 GKSERIEEAVCLFNEMKK 1011
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+T+ G G M+ G+ N TYN L+ + ++ + +YK M
Sbjct: 146 FATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMV 205
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G+SP+ TY+ L+ ++G+ R + L + EM+ +G++ +V Y + + D
Sbjct: 206 EDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFD 265
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF------------------ 272
EA++I M+ S C+PD T + +I + G++S+A+ +F
Sbjct: 266 EAYQILGKMEDS-GCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITL 324
Query: 273 -----------------NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
N M+ G+ N+ T+++ + R D+ + + + E GI
Sbjct: 325 LDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGI 384
Query: 316 TPD 318
+P+
Sbjct: 385 SPE 387
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 36/263 (13%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+++Y + E P+ + +I++ AG +V+ +MKA KP+ +TY L
Sbjct: 265 DEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITL 324
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
LD G + V I+ M +G + N +Y +++ A + ++ L+V+ EMKEKG+
Sbjct: 325 LDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGI 384
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS---------------------------- 241
YN+L++ D A E+F M +
Sbjct: 385 SPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQ 444
Query: 242 ------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
S+ PD +++++ + G++ A+ +F E+ + G P+ T +I+C
Sbjct: 445 RYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCS 504
Query: 296 KAQRTDDVVRALNRLPELGITPD 318
KA + D+ + + + E G PD
Sbjct: 505 KASKADEAMNFFSDMVETGCVPD 527
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I + + +++Y + + G P TY LLD + +A + + ++ EM
Sbjct: 846 YNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEML 905
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G PN Y LL + A E+ ++ +M E+G+ + Y L+ G +
Sbjct: 906 EYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLN 965
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ F + +PD ++ +I ++ EA +FNEM + G PNL+ SL
Sbjct: 966 DGLSYFRQLLEL-GLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSL 1024
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I GKA + + + L G P+
Sbjct: 1025 ILHLGKAGKASEAAQMYEELLIKGWKPN 1052
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 5/251 (1%)
Query: 71 GSSPKSY---IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G SP Y +++N LK +++ D A + ++ +G
Sbjct: 418 GPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMA 477
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
V+ E+K +GV P+ ITY ++ +A + + + +M + G P+ SL+
Sbjct: 478 KRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDT 537
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ G + ++ ++KE ++ + YNTLL+ G E + E+M S + P
Sbjct: 538 LYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIH-PP 596
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+++++ S G+V+ A M M E G P+L +++ K +R ++ R
Sbjct: 597 NLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMF 656
Query: 308 NRLPELGITPD 318
++ ++ + PD
Sbjct: 657 CQMKKI-LAPD 666
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 23/244 (9%)
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+R + + + ++ + K G+ L YN+L+ D D A ++F +MK
Sbjct: 744 LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL- 802
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
C PD +T++ ++ ++ E + EM G+E ++I K++R +
Sbjct: 803 GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQA 862
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGY-------VVK 356
+ L G +P G LL+ + + GK+V+ N L Y +
Sbjct: 863 IDLYYNLMSEGFSPTPCTYGPLLDGLLKA-----GKMVDAENLFNEMLEYGCKPNCTIYN 917
Query: 357 LLLEEQDIEGDFKKEATELF-----NSISKDVKKAYCNCLIDLCVNLNL---LENACKLL 408
+LL I G+ + ++F I+ D+ K+Y + LC L L +LL
Sbjct: 918 ILLNGHRIAGN-TENVCQIFEKMVEQGINPDI-KSYTVLIDTLCTAGRLNDGLSYFRQLL 975
Query: 409 ELGL 412
ELGL
Sbjct: 976 ELGL 979
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI + A D ++E M + G +PN +TYN LL + + +P + ++
Sbjct: 551 DVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 610
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G P+ TY +LL + E + V+ EM KG V YN LL
Sbjct: 611 RKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 670
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM-LEAGFEPNLF 285
G EA ++F+ M S + C+PD+ + + MI S ++ +A +F M + G P+L
Sbjct: 671 GKPGEAKQLFQVMVSRQ-CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLV 729
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI QR + ++ + L ++PD
Sbjct: 730 TYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
NAF + G + G VYEEM A G P++ITY+ L+ A++ Q +++
Sbjct: 521 NAFLNGLMRKGRIADAQG---VYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFET 577
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G PN TY LL + ++ ++R+M E+G Y TLL +VG
Sbjct: 578 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGK 637
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+F++M S + PD ++ ++ GK EA+ +F M+ +P+
Sbjct: 638 IEQAVEVFDEMVSKGH-DPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHN 696
Query: 289 SLIQCYGKAQRTDDVVRALNRLPE-LGITPD 318
+I KA+R DD V R+ + G +PD
Sbjct: 697 IMIDGLSKAKRLDDAVEVFERMEQDHGCSPD 727
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+ T + D ++S LI + +Y++M + PN+ TYN L+ +
Sbjct: 469 FSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLM 528
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R R + +Y+EM G SP+ TY++L+ + AR + ++ M +G + +
Sbjct: 529 RKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAV 588
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
YN LL DEA E+F M C PD T+++++ GK+ +A +F+E
Sbjct: 589 TYNCLLHGLCKESKPDEAHELFRKM-VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDE 647
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M+ G +P++ L++ + +A + + + + PD
Sbjct: 648 MVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPD 691
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 125/270 (46%), Gaps = 15/270 (5%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
+S R K +E + RN I P++ + ++I+ AG D L++ E M G
Sbjct: 351 ESGRIDKAEEACLEIAGRN----IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYC 406
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN--GLSPNWNTYASLLRAYGRARYGEDTL 198
P+M T++ L++ + +A + + + + M S + +Y SLL + +A+
Sbjct: 407 PDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAF 466
Query: 199 SVYREM-KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+++ M E+ V Y+ L+ + A ++++ M NC P+ T+++ +
Sbjct: 467 AIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL-NCVPNVTTYNAFLN 525
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+G++++A+ ++ EM+ AG P++ ++LI + A++ D + G P
Sbjct: 526 GLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRP 585
Query: 318 DDRFCGCLLNVMTQTPK-----EELGKLVE 342
+ CLL+ + + K E K+VE
Sbjct: 586 NAVTYNCLLHGLCKESKPDEAHELFRKMVE 615
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L + ++A K ++ TYN LLD + R + Q ++++M G+ PN TYA L+++
Sbjct: 114 LTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQS 173
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF-EDMKSSENCQ 246
R ++ + + EM +KG + S TLY + G E +F D++ +
Sbjct: 174 SCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLE--KRVA 231
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+ +++ + K EA +F M+++G +P+ + + ++ + K + D+ +
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 100/275 (36%), Gaps = 69/275 (25%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL---L 185
V+E+M A GV PN TY L+ + + + + EM D G P+ Y + L
Sbjct: 150 QVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECL 209
Query: 186 RAYGRAR-----YGED---------------------------TLSVYREMKEKGMQLSV 213
+A G+ +G D ++R M + G +
Sbjct: 210 KATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDA 269
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDM---------------------------KSSENCQ 246
T+Y+ ++ + DEAF++F +M ++ E C+
Sbjct: 270 TIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACR 329
Query: 247 PDSWTFSS-------MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ SS +I + G++ +AE E+ +P+ S+IQ KA R
Sbjct: 330 TMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGR 389
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
D + L + + G PD L+N + + K
Sbjct: 390 VDSALSLLETMIKRGYCPDMATHSMLINELCKADK 424
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 14/255 (5%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
GL + TY +++A+ R+R VY EM+ KG +L + YN LL A G D+A
Sbjct: 123 GLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQA 182
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
F++FEDMK ++C PD++T++ +I + G+ S+ + F+EM+ G NL ++I+
Sbjct: 183 FQVFEDMKQ-KHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIE 241
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEELGKLVECVEK--SNS 349
GK + D V+ L+++ E P+ L+++ T+ L ++++ + + S
Sbjct: 242 ALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRS 301
Query: 350 KLGYVVKLLLEEQDIEGDFKKEATELF----NSISKDVKKAYCNCLIDLCVNLNLLENAC 405
Y+VK L + EA +F NS K + A+ + L LC LE A
Sbjct: 302 IYSYLVKSL-----CKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLE-AI 355
Query: 406 KLLELGLTLEVYTDI 420
LL + + TD+
Sbjct: 356 DLLHMMPEKGIVTDV 370
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 124/242 (51%), Gaps = 2/242 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ + +S L+K +G+ NV+ M K + + ++L+ + A++ + +
Sbjct: 298 MNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDL 357
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + G+ + Y + A G+ + +++ +MK G+ V YN +++
Sbjct: 358 LHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGR 417
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG D+A E+FE M++S +C+PD T++S+I G + EA +F EM E G++P++F
Sbjct: 418 VGLVDKASELFEVMEAS-SCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVF 476
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
+ LI+C+GK+ + + + + G TP+ LL+ + + K EE KL E +
Sbjct: 477 TYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETM 536
Query: 345 EK 346
++
Sbjct: 537 KQ 538
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P+ F+ +I YG G D ++E M+A KP+++TYN+L++ +G+ +
Sbjct: 401 IIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAH 460
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++KEM + G P+ TY+ L+ +G++ E S++ EM +G ++ YN LL
Sbjct: 461 MLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCL 520
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
G T+EA +++E MK + PDS T+S
Sbjct: 521 ERRGKTEEAHKLYETMK-QQGLIPDSITYS 549
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 103 KW--RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
KW R+ + +++ + + VYEEM+ G K ++ YN LLD + +A
Sbjct: 121 KWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVD 180
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q ++++M P+ TY L+R G+A LS + EM KG L++ +NT++
Sbjct: 181 QAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTII 240
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS----------------SMITICS---- 260
D+ + M ++ CQP+ +T+S ++ ICS
Sbjct: 241 EALGKNKMVDKVIFVLSKMVEND-CQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMN 299
Query: 261 -----------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
C+ G SEA +F M + + + S+++ A++T + + L+
Sbjct: 300 RSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLH 359
Query: 309 RLPELGITPD 318
+PE GI D
Sbjct: 360 MMPEKGIVTD 369
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
N++++MK G+ P++ TYN ++ + GR + +++ M + P+ TY SL+
Sbjct: 391 NLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCL 450
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ ++ +++EM+EKG V Y+ L+ + A +F++M SE C P+
Sbjct: 451 GKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEM-ISEGCTPN 509
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
T++ ++ RGK EA ++ M + G P+ + L + ++QRT
Sbjct: 510 IVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRT 561
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI G G+ D +++EM+ G P++ TY+ L++ G++ + +++
Sbjct: 439 DVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLF 498
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
EM G +PN TY LL R E+ +Y MK++G+ Y+ L
Sbjct: 499 DEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 107 DPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ F S LI+ +G + + ++++EM + G PN++TYN LLD + R + +
Sbjct: 472 DPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHK 531
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+Y+ M GL P+ TY+ L R R++
Sbjct: 532 LYETMKQQGLIPDSITYSILERLESRSQ 559
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAG--NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E+ + PN ++ I +G D ++ E A G+KPN +TYN LL+ R R
Sbjct: 420 EQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRL 479
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I KEM N +P+ TY +L++ + D L ++ EM+ KG ++ N L
Sbjct: 480 IEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNIL 539
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
A VG +A + MK S + + I S G++ EA+A+ EM+ G
Sbjct: 540 ARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLA-IHCLSTAGEMEEAQALLYEMINKG 598
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ PNL ++I+ + + R DD LN + E GI PD
Sbjct: 599 YSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPD 637
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 116/246 (47%), Gaps = 6/246 (2%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RA E +S + + + I + + + YG +G F L + MK +G +P +I
Sbjct: 228 RAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLI 287
Query: 145 --TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
YN++L ++ + K+ + ++ +M +NG+S N TY S+++ + ED + +
Sbjct: 288 DTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLD 347
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSC 261
+M + V Y +++ ++A+ + + M+ + C+P+ +T++++I +C+
Sbjct: 348 DMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMREN-GCEPNIYTYNALIQGLCAV 406
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
R + EA + M + G PN++ T L K +R D N G+ P+
Sbjct: 407 R-RPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVT 465
Query: 322 CGCLLN 327
LLN
Sbjct: 466 YNTLLN 471
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 10/230 (4%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+KE Y E ID S L+ L D N++ +M GV N +TY ++
Sbjct: 277 MKEMGY------EPGLIDTAYNSVLVSLVKNK-KLDMAENLFAQMINNGVSCNNLTYTSM 329
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ ++ + +M N +P+ TY ++ A + + E V ++M+E G
Sbjct: 330 IQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGC 389
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEA 268
+ ++ YN L+ V +EA E+ M+ P+ +T++ + +C R ++ A
Sbjct: 390 EPNIYTYNALIQGLCAVRRPEEALELVTLMEQG-GVPPNIYTYTILTHGLCKLR-RLDRA 447
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ MFNE L G +PN +L+ Y + R + + L + + TPD
Sbjct: 448 KEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPD 497
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V ++M+ G +PN+ TYN L+ + +RP + + M G+ PN TY L
Sbjct: 380 VLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLC 439
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ R + ++ E +G++ + YNTLL EA +I ++M ++ C PD
Sbjct: 440 KLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQND-CTPDH 498
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++++I ++ +A M +EM G++ N L L + + D R
Sbjct: 499 VTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRR 558
Query: 310 LPELGI 315
+ + G
Sbjct: 559 MKDRGF 564
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 112/251 (44%), Gaps = 42/251 (16%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYE-EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++P+A ++ L A N L ++ K G N Y ++D +GRAK ++++
Sbjct: 181 LNPDAVVKVLNLQTDAQN---ALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQS 237
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ--LSVTLYNTLL-- 220
+ ++M G + S + +YGR+ +++L + MKE G + L T YN++L
Sbjct: 238 LLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVS 297
Query: 221 ---------------------AMCADVGYT------------DEAFEIFEDMKSSENCQP 247
C ++ YT ++A ++ +DM + N P
Sbjct: 298 LVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQN-NYAP 356
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T++ +I+ R + +A + +M E G EPN++ +LIQ +R ++ + +
Sbjct: 357 DVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELV 416
Query: 308 NRLPELGITPD 318
+ + G+ P+
Sbjct: 417 TLMEQGGVPPN 427
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++++I+ + + + + ++M P+++TY ++ + + K Q + ++M
Sbjct: 326 YTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMR 385
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+NG PN TY +L++ R E+ L + M++ G+ ++ Y L + D
Sbjct: 386 ENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLD 445
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTS 289
A E+F + + +P+ T+++++ CRG ++ EA + EM + P+ T+
Sbjct: 446 RAKEMFNE-ALARGLKPNRVTYNTLLN-GYCRGSRLIEAMDILKEMHQNDCTPDHVTYTT 503
Query: 290 LIQCYGKAQRTDDVVRALNRLPELG 314
LIQ + + D +R + + G
Sbjct: 504 LIQGLVQGNQLPDALRMHDEMENKG 528
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 49/115 (42%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R ++ + + + I TAG + + EM G PN+ TYN ++ R
Sbjct: 558 RMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQG 617
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
R + M +NG+ P+ +Y L++ + +D +Y E+G+ L+
Sbjct: 618 RLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLN 672
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N+ + ++ + + L + GN Y MK G + Y + + A
Sbjct: 526 NKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEME 585
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + + EM + G SPN TY ++++ + R +D ++ M E G+ YN L+
Sbjct: 586 EAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILI 645
Query: 221 AMCADVGYTDEAFEIF 236
+ G T +A +++
Sbjct: 646 KEFHNQGRTQDADQLY 661
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + + + ++ LI LYG AG L ++ EM + KPN+ TY L++ R
Sbjct: 250 RMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREG 309
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + ++++M + GL P+ Y +L+ AY RA Y ++ M+ G + YN
Sbjct: 310 LCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 369
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G+ D+A +F+DMK P + +++ S G V++ E + N+M +
Sbjct: 370 ILVDAYGKAGFQDDAEAVFKDMKRV-GITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCK 428
Query: 278 AGFEPNLFVLTSLIQCYGKA---QRTDDVVRALNR 309
+G + + +VL S++ YG+ + ++V+R + +
Sbjct: 429 SGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEK 463
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 13/269 (4%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ LIK Y +G + V+ EM+ G+ + + YN ++ + + + + I+K
Sbjct: 191 DTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKR 250
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + P TY L+ YG+A L ++ EM + ++ Y L+ A G
Sbjct: 251 MKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGL 310
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+FE M+ + +PD + +++++ S G A +F+ M G EP+
Sbjct: 311 CEKAEEVFEQMQEA-GLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 369
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE--- 345
L+ YGKA DD + +GITP + LL+ ++ +G + +C E
Sbjct: 370 ILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSK-----MGSVNKCEEILN 424
Query: 346 ---KSNSKLG-YVVKLLLEEQDIEGDFKK 370
KS KL YV+ +L G F K
Sbjct: 425 QMCKSGLKLDTYVLNSMLNLYGRLGQFGK 453
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
KP++I YN L++ G+ + ++ Y ++ + P +TYA L++AY + E +
Sbjct: 152 KPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEA 211
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
V+ EM+ G+ S +YN + G +D+A EIF+ MK + C+P + T++ +I +
Sbjct: 212 VFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMK-KDACKPTTETYTMLINLY 270
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GK A +F+EM+ +PN+ T+L+ + + + ++ E G+ PD
Sbjct: 271 GKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPD 329
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 107/231 (46%), Gaps = 3/231 (1%)
Query: 90 LKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L EK+ + + ++ ++P+ A++ L++ Y AG G ++ M+ +G +P+ +YN
Sbjct: 310 LCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 369
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
L+D G+A + ++K+M G++P ++ LL AY + + +M +
Sbjct: 370 ILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKS 429
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++L + N++L + +G + E+ M+ D T++ +I G +
Sbjct: 430 GLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYV-ADISTYNILINRYGQAGFIER 488
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
E +F + G +P++ TS I Y K + + + + G PD
Sbjct: 489 MEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPD 539
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 1/204 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L+ YG AG D V+++MK +G+ P M ++ LL + + + I
Sbjct: 364 DRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEIL 423
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +GL + S+L YGR V R M++ ++ YN L+
Sbjct: 424 NQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQA 483
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ + ++F+ + S+ +PD T++S I S + + +F EM++ G P+
Sbjct: 484 GFIERMEDLFQ-LLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGT 542
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
L+ +T+ V + +
Sbjct: 543 AKVLLAACSNEDQTEQVTTVIRTM 566
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D ++++ LYG G F V M+ ++ TYN L++ G+A +++
Sbjct: 432 KLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMED 491
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++ + GL P+ T+ S + AY + + L ++ EM + G LLA C+
Sbjct: 492 LFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAACS 551
Query: 225 DVGYTDEAFEIFEDM 239
+ T++ + M
Sbjct: 552 NEDQTEQVTTVIRTM 566
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + TL+ Y G D L+++ EM G+KP+ I YN ++D + A R K
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EMT++G++ N TY+ +LR + R ++ + +++E++ +++ + NT++A
Sbjct: 625 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 684
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++F + S P T+S MIT G V EAE MF+ M AG EP+
Sbjct: 685 FQTRRVEEAKDLFASI-SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
Query: 284 LFVLTSLIQCYGKAQRTDDVVRA 306
+L +++ + + +++VRA
Sbjct: 744 SRLLNHVVR---ELLKKNEIVRA 763
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 145/312 (46%), Gaps = 28/312 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++T+I + G+ + ++++EM G+ P+ +TY++++ + +A+ + +
Sbjct: 218 DVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFL 277
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G+ PN TY +L+ Y ++ + V++EM+ + + V +N L+
Sbjct: 278 RQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKY 337
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F+ M + + PD ++++ M+ + +G + + +F+ ML G P +
Sbjct: 338 GKIKEARDVFDTM-AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 396
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE----ELGKLVE 342
LI+ Y D + N + + G+ P NV+T T +GK+ +
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKP---------NVLTYTTVIAALCRIGKMDD 447
Query: 343 CVEKSNSKLG-------YVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLC 395
+EK N + Y L++ G K A EL + I + +D+
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK-AKELISEIMNNGMH------LDIV 500
Query: 396 VNLNLLENACKL 407
+ +++ N CKL
Sbjct: 501 LFSSIINNLCKL 512
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 133/332 (40%), Gaps = 48/332 (14%)
Query: 71 GSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G +P Y + + S LK K + N +D FS++I G
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDA 518
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
N+++ +G+ P + Y+ L+D + + ++ M G+ PN Y +L+
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT------------------ 229
Y + ++ LS++REM +KG++ S LYN ++ + G T
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 638
Query: 230 -----------------DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
DEA +F+++++ N + D T ++MI +V EA+ +F
Sbjct: 639 KCTYSIVLRGLFKNRCFDEAIFLFKELRAM-NVKIDIITLNTMIAGMFQTRRVEEAKDLF 697
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN--VMT 330
+ +G P + + +I K ++ + + G PD R LLN V
Sbjct: 698 ASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR----LLNHVVRE 753
Query: 331 QTPKEEL---GKLVECVEKSNSKLGYVVKLLL 359
K E+ G + +++ N L ++ +LL
Sbjct: 754 LLKKNEIVRAGAYLSKIDERNFSLEHLTTMLL 785
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P TY L+D RA RP + ++ GL + LL+ + A+ ++ L
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166
Query: 199 SVY-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMI 256
+ E G V Y+ LL D G + +A ++ M + C PD ++++I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G V++A +F EM++ G P+ +S++ KA+ D L ++ G+
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286
Query: 317 PDD 319
P++
Sbjct: 287 PNN 289
>gi|255661210|gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 116/224 (51%), Gaps = 7/224 (3%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN +++TL+++YG A F ++++ M+ ++ N++TYN ++ G+ +
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKAN 239
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 240 NLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAY 299
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G A + ++K +PD+ + I I + G++ EA +F + ++AG +
Sbjct: 300 ERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKD 354
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ V +I + K ++ +VV ++ LG PD +LN
Sbjct: 355 ITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVISLVLN 398
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 173 WSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M + +P++ T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 233 LEHEKANNLIQEM-HNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G++P+ Y S++ +G+A+ + S+ EM+E G+ Y+TLL M +
Sbjct: 68 SRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + EA+ +F M + G EPN+
Sbjct: 128 QKFLEALSVFAEMREIK-CLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+ P+++ YN++++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM + G+ P+ +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ ++ + + T
Sbjct: 163 DMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKDIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++M+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ +D LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K + PD ++SMI + EA ++ +EM EAG P+ ++L
Sbjct: 62 KAISIFSRLKRA-GITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + Q+ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQ 161
>gi|410110103|gb|AFV61131.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
alba]
Length = 419
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 302
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 303 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 357
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 358 VKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLN 404
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 118 PNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 238 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 296
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 330
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + I+
Sbjct: 14 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIAIF 73
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + + Y+TLL M +
Sbjct: 74 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVEN 133
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 134 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 192
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 193 YNTLLRVYGDAE 204
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ + ++ +K G P+++ YN +++ G+AK + +++
Sbjct: 49 DLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 108
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN ++Y++LL Y + + LSV+ EM+E
Sbjct: 109 GEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 168
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 169 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 227
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 228 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 287
Query: 312 ELGITPD 318
G+ D
Sbjct: 288 SSGVEID 294
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA ++ EM AG PN
Sbjct: 62 KLCDYSKAIAIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNT 120
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 SSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 167
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 120/226 (53%), Gaps = 1/226 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T++ + G+ D + Y EM G+ P+++TY++++ + +A+ + +
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVL 259
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ P+ TY S+L Y + ++ + ++M+ G++ +V Y++L+
Sbjct: 260 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + EA +IF+ M + +PD T+ +++ + +G + E A+ + M+ G +P+ V
Sbjct: 320 GRSTEARKIFDSM-TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI Y K ++ D + +++ + G+ P+ G +++V+ ++
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 129/289 (44%), Gaps = 12/289 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ LI Y D + V+ +M+ G+ PN++ Y ++D + ++ +
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D GL+PN Y SL+ + + EM ++G+ L+ +N+++
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E+ ++F D+ +PD T++++I C GK+ EA + M+ G +P++
Sbjct: 495 GRVIESEKLF-DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVECVE 345
+LI Y + R DD + + G++P+ +L + T + K L +
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
KS ++L ++ + + EA +F ++ CL DL
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL----------CLTDL 652
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
EK +D R + D ++TLI AG D + M ++GVKP+++TY L++
Sbjct: 501 EKLFDLMVR-IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
R R ++KEM +G+SPN TY +L+ R +Y + + G QL
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G++ EA+ +
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKCGRMDEAKDL 678
Query: 272 FNEMLEAGFEPNL----FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
F G P++ + +LI+ G + DD+ ++ E G + D R ++
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIE-QGSLEELDDLFLSME---ENGCSADSRMLNSIVR 734
Query: 328 VMTQ 331
+ Q
Sbjct: 735 KLLQ 738
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L++ + + G P++++YN +L+ + + + Y EM D G+ P+ TY+S++ A
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 245
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+A+ + + V M + G+ YN++L G EA + M+ S+ +P
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR-SDGVEP 304
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+SS++ G+ +EA +F+ M + G EP++ +L+Q Y ++ L
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ + GI PD L+ + K + LV
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 398
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 5/216 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN +S+L+ G +++ M G++P++ TY LL ++
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M NG+ P+ + + L+ AY + + + V+ +M++ G+ +V Y T++ +
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEP 282
G D+A FE M E P+ ++S+I +C+C K +AE + EML+ G
Sbjct: 422 CKSGSVDDAMLYFEQM-IDEGLTPNIIVYTSLIHGLCTC-DKWDKAEELILEMLDRGICL 479
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N S+I + K R + + + + +G+ PD
Sbjct: 480 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 515
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 11/272 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+++I + G +++ M IGVKP++ITYN L+D A + + + M
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ TY +L+ Y R +D L++++EM G+ ++ YN +L T
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E++ + S Q + T++ ++ EA MF + + +
Sbjct: 604 AAKELYVSITKS-GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 662
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECVEKSNS 349
I K R D+ G+ PD R + N++ Q EEL L +E++
Sbjct: 663 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722
Query: 350 K-----LGYVVKLLLEEQDIEGDFKKEATELF 376
L +V+ LL+ GD + T LF
Sbjct: 723 SADSRMLNSIVRKLLQ----RGDITRAGTYLF 750
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 99/256 (38%), Gaps = 46/256 (17%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG---LSPNWNTYASLL 185
+V++E+ G ++ N L + R P + Y M G ++P +TYA L+
Sbjct: 41 HVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILI 99
Query: 186 ----RAYGRARYGEDTLS---------------------------------VYREMKEKG 208
RA GR G L V R M E G
Sbjct: 100 GCCCRA-GRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELG 158
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE--NCQPDSWTFSSMITICSCRGKVS 266
V YN LL D + EA E+ M PD ++++++ G
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+A + ++EML+ G P++ +S+I KAQ D + LN + + G+ PD +L
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Query: 327 N--VMTQTPKEELGKL 340
+ + PKE +G L
Sbjct: 279 HGYCSSGQPKEAIGTL 294
>gi|410110127|gb|AFV61143.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
origanoides]
Length = 408
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 302
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 303 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGE 357
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 358 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLN 404
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 118 PNTTSYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKL 177
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 238 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 296
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 330
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 14 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 73
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 74 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLXMYVEN 133
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 134 KKFLEALSVFSEMREIK-CLLDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 192
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 193 YNTLLRVYGDAE 204
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 49 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 108
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 109 SEMKTAGVMPNTTSYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQL 168
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 169 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 227
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 228 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 287
Query: 312 ELGITPD 318
G+ D
Sbjct: 288 SSGVEID 294
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 62 KLCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 TSYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQ 167
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+ N +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 184 KMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 243
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 244 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 303
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++KS +N D + I I + G++ EA +F + ++AG
Sbjct: 304 VAYERAGLVAHAKRLLHELKSPDNIPRD-----TAIHILAGAGRIEEATYVFRQAIDAGE 358
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ + V +++ LG PD +LN
Sbjct: 359 VKDITVFERMIHLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLN 405
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + + +
Sbjct: 50 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALI 109
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 110 SEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 169
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 170 GMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 228
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 229 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 288
Query: 312 ELGITPD 318
G+ D
Sbjct: 289 SSGVEID 295
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 15 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 74
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + ++ EMK G+ + Y+TLL M +
Sbjct: 75 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVEN 134
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G E N+
Sbjct: 135 KKFIEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNVVS 193
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 194 YNTLLRVYGDAE 205
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM + LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 3 LFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA A+ +EM AG PN
Sbjct: 63 KLCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNT 121
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 122 ASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 168
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN ++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V ++ + K ++ +VV ++ LG PD +LN
Sbjct: 352 VKDITVFERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLN 398
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 173 WSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M S +P++ T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 233 LEHEKANNLIQEM-HSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+ P+++ YN++++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLYDYSKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ P+ +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRMVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 DMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++M+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 96/188 (51%), Gaps = 1/188 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+ +
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKAISIFSRLK 71
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ Y S++ +G+A+ + S+ EM+ G+ Y+TLL M +
Sbjct: 72 RSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYVENQKFL 131
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F +M+ + C D T + MI + EA+ +F M + G EPN+ +L
Sbjct: 132 EALSVFAEMREIK-CLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTL 190
Query: 291 IQCYGKAQ 298
++ YG A+
Sbjct: 191 LRVYGDAE 198
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ GLSP TY++L+ +G+ +D LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD ++SMI + EA ++ +EM G P+ ++L
Sbjct: 62 KAISIFSRLKRS-GIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + Q+ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 52/115 (45%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++D
Sbjct: 306 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMVDLF 365
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++++M G P+ N A +L AYG+ + VY EM+++G
Sbjct: 366 SKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYLEMQDEG 420
>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 426
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 237 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLN 398
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 110 VIPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 230 GKTLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ ++G +P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 68 SRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN ++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMKTAGVIPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + + +A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
IF +K+S PD +++MI + EA ++ +EM AG PN ++L+
Sbjct: 64 ISIFSRLKNS-GYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLT 122
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
Y + ++ + + + + E+ D C +++V Q
Sbjct: 123 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 161
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 50/115 (43%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 306 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 365
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ N A +L AYG+ + VY EM+E G
Sbjct: 366 SKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLNAYGKLHEFDKANDVYMEMQEVG 420
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 112/208 (53%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+IK G+ L + ++M+ G KP+++ YN ++D++ + +R + + EM
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV 238
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D G+ PN TY+S+L + + S++++M + + + + L+ G
Sbjct: 239 DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +FE M + +PD++T+S+++ + ++ EA+ +F+ M+ GF P++ V L
Sbjct: 299 EARRVFE-MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNIL 357
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I + K++R ++ L+ + + +TPD
Sbjct: 358 INGHCKSRRLNEAKTLLSEMYDRDLTPD 385
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F TL+ + + +++E+ +G P++ITY ++ + + + K+M
Sbjct: 144 FGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKME 203
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G P+ Y +++ + + R + + + EM ++G+ +V Y+++L ++G +
Sbjct: 204 EKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLN 263
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F+ M N P++ TF+ ++ G + EA +F M E G EP+ + ++L
Sbjct: 264 EATSLFKQM-IGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSAL 322
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ Y + D+ + + + G P R L+N
Sbjct: 323 MDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILIN 359
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN +S+++ + G + +++++M V PN +T+ L+D + + + +
Sbjct: 242 IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEAR 301
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ MT+NG+ P+ TY++L+ Y ++ ++ M KG SV +YN L+
Sbjct: 302 RVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGH 361
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA + +M + PD+ T+S+++ G+ A+ +F EM G P+
Sbjct: 362 CKSRRLNEAKTLLSEMYD-RDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ L+ K D+ R L + E I P C+ N++ Q
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHI----CIYNILIQ 464
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 7/228 (3%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+A+ S L+ Y D +++ M G P++ YN L++ +++R + K
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T+ EM D L+P+ TY++L++ + +A + +++EM G+ Y+ LL
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G+ DEAF + + M+ S+ +P ++ +I GK+ A +F+ + G +P+
Sbjct: 432 CKHGHLDEAFRLLKAMQESK-IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ T +I K +++ ++ G P+ C NV Q
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNS----CTYNVAIQ 534
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 112/241 (46%), Gaps = 11/241 (4%)
Query: 87 ASKLKEKSYDTRA----RNEKWRIDPNAFSTLIKL----YGTAGNFDGCLNVYEEMKAIG 138
S +K+K Y T + + I PN ++ I + + + + +M +G
Sbjct: 77 GSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLG 136
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
++P +T+ LL+ + + ++ E+ G +P+ TY ++++ + + + L
Sbjct: 137 LQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNAL 196
Query: 199 SVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ ++M+EKG + V YNT++ ++C D +EA F +M + P+ T+SS++
Sbjct: 197 QLLKKMEEKGCKPDVVAYNTVIDSLCKD-RRANEAMYFFSEM-VDQGIPPNVVTYSSILH 254
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G+++EA ++F +M+ PN T L+ K + R + E G+ P
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP 314
Query: 318 D 318
D
Sbjct: 315 D 315
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 1/186 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM + P+ +TY+ L+ +A RP + ++KEM GL P+ TY+ LL +
Sbjct: 376 EMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHG 435
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
+ ++ + + M+E ++ + +YN L+ + G + A E+F ++ + QP T+
Sbjct: 436 HLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNL-FVKGIQPSVVTY 494
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ MI+ G +EA MF +M+ G PN IQ + + + VR + +
Sbjct: 495 TVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVG 554
Query: 313 LGITPD 318
G + D
Sbjct: 555 RGFSAD 560
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/226 (18%), Positives = 95/226 (42%), Gaps = 40/226 (17%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN------------------ 172
+ ++ I P ++ +N LL ++ + K V ++ K+M +
Sbjct: 57 FNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCH 116
Query: 173 -------------------GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
GL P T+ +LL D + ++ E+ + G S+
Sbjct: 117 SNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMF 272
Y T++ +G+T A ++ + M+ + C+PD ++++I ++C R + +EA F
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKME-EKGCKPDVVAYNTVIDSLCKDR-RANEAMYFF 234
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+EM++ G PN+ +S++ + + ++ ++ + P+
Sbjct: 235 SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPN 280
>gi|255582603|ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528243|gb|EEF30297.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 841
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + + +I +G D +++EMK ++P+ +++L+D+MG++ R I
Sbjct: 321 LDASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKI 380
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM GL + + Y SL+ +Y +A + L ++ EMK+ G + + LY ++ A
Sbjct: 381 YMEMQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAK 440
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A IF+DM + P T+S ++ + + G+V A ++N M AG +P L
Sbjct: 441 SGKLDIATSIFKDMDKA-GFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLKPGLS 499
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+L+ + D + L + +G + D
Sbjct: 500 TYTALLTLLASKKLVDVAAKILLEMKAMGFSVD 532
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 165/382 (43%), Gaps = 27/382 (7%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ ++ +ID ++ LI + G +YE M+A + TY ++ ++ ++
Sbjct: 278 KVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPSLAKSG 337
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R +++EM + + P++ ++SL+ + G++ + ++ +Y EM+ G++ S ++Y
Sbjct: 338 RLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGLRSSASMYV 397
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L+ G D A ++++MK + +P+ ++ +I + GK+ A ++F +M +
Sbjct: 398 SLIESYTKAGKLDTALRLWDEMKKA-GFRPNYGLYTLIIESHAKSGKLDIATSIFKDMDK 456
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
AGF P + L++ + + + D ++ N + G+ P LL ++
Sbjct: 457 AGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLKPGLSTYTALLTLLASK----- 511
Query: 338 GKLVECVEK---SNSKLGYVVK------LLLEEQDIEGDFKKEATELFNSISKDVKKAYC 388
KLV+ K +G+ V L++ +D D S
Sbjct: 512 -KLVDVAAKILLEMKAMGFSVDVSASDVLMVYIKDGSVDLALRWLSFMGSSGIRTNNFII 570
Query: 389 NCLIDLCVNLNLLENACKLLE------LGLTLEVYTDIQSR----SPTQWSLHLKSLSLG 438
L + C+ L E+A LLE + L +YT I + Q HL S+ LG
Sbjct: 571 RQLFESCMKKGLYESAKPLLETYVNSAAKVDLILYTSILANLVRCQEEQHERHLMSI-LG 629
Query: 439 AALTALHIWINDLSKALESGEE 460
A H ++ L E ++
Sbjct: 630 ATRHKAHAFMCGLFTGPEQRQQ 651
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 147/334 (44%), Gaps = 21/334 (6%)
Query: 99 ARNEKWRI-DPNAFSTLIKLYGTAGNFDGCLNVYEEM---KAIGVKPNMITYNNLLDTMG 154
A+ + W + D ++ L +FDG ++++EM + G ++ YN ++ +
Sbjct: 205 AKRQTWYVVDDECYALLFDGLNKIRDFDGIQSLFDEMVQDSSKGGISSVYAYNRVIQHLA 264
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+A++ +K++ D+G + TY +L+ ++ +Y M+ L +
Sbjct: 265 KAEKLELSFCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESMQAAQCSLDAS 324
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
Y ++ A G D AF++F++MK +P FSS++ G++ + ++ E
Sbjct: 325 TYELMIPSLAKSGRLDVAFKLFQEMK-ERKIRPSFGIFSSLVDSMGKSGRLDTSMKIYME 383
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M G + + SLI+ Y KA + D +R + + + G P+ ++ ++ K
Sbjct: 384 MQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAKSGK 443
Query: 335 EELGKLVECVEKSNSKLGYV-----VKLLLEEQDIEGDFKKEATELFNSISKDVKK---A 386
++ + K K G++ LLE G A +L+NS++ K +
Sbjct: 444 LDIA---TSIFKDMDKAGFLPTPSTYSCLLEMHAASGQV-DSAMKLYNSMTNAGLKPGLS 499
Query: 387 YCNCLIDLCVNLNLLENACKLL----ELGLTLEV 416
L+ L + L++ A K+L +G +++V
Sbjct: 500 TYTALLTLLASKKLVDVAAKILLEMKAMGFSVDV 533
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 93 KSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K+ D EK +DP+ F+TLI YGTAG + C V +M+ G+K ++I++ +++
Sbjct: 244 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVV 303
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ + + I +M ++PN Y S++ AY + E + +MK G+
Sbjct: 304 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVS 363
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
S+ YN LL DEA E+ +++ + +PD +++++I+ C +G +A
Sbjct: 364 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRN-QGLRPDVVSYNTIISACCNKGDTDKALE 422
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ EM + G P L +L+ A R D+ ++ + P G +++
Sbjct: 423 LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 479
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 45/278 (16%)
Query: 78 IWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMK 135
+W + K A K+ ++ D + PN ++T+I + G+ + + ++M
Sbjct: 26 LWRSGKGSDALKVFDEMVD-------MGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 78
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
G KPN++TYN LL + RA R + + + EM + + P+ TY+ L R
Sbjct: 79 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138
Query: 196 DTLSVYREMKEKGMQL-----------------------------------SVTLYNTLL 220
LS++ E +KG+ L + +YNTL+
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
V AF IFE MK S + +PD T++++I V++AE + EM ++G
Sbjct: 199 NGYCQVRDLRGAFCIFEQMK-SRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 257
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P++ +LI YG A + + L+ + + GI D
Sbjct: 258 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 295
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y + G ++E+MK+ ++P+ ITYN L++ + + + + + + EM
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ T+ +L+ AYG A E +V +M++KG++ V + +++ G
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA I +DM ++ P++ ++S+I G +A + +M +G ++ L
Sbjct: 314 EAVAILDDM-IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
++ ++ + D+ + L G+ PD
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPD 400
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN+ R D +++T+I G+ D L + +EM G++P + TY+ L+ + A R
Sbjct: 393 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 452
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
++ +Y++M + P+ + Y ++ AY R S+ +EM EKG+ T
Sbjct: 453 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 507
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+ +YN ++ + R+ + ++ EM D G+ PNW TY +++ + + E +
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+M G + ++ YN LL+ G DE + ++M +S + PD +T+S + +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEM-ASHSMFPDGFTYSILFDGLT 132
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
G+ ++F E L+ G + + L+ K + + L L G+ P
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192
Query: 321 FCGCLLNVMTQT 332
L+N Q
Sbjct: 193 IYNTLINGYCQV 204
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 14/255 (5%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
GL + TY +++A+ R+R VY EM+ KG +L + YN LL A G D+A
Sbjct: 123 GLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQA 182
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
F++FEDMK ++C PD++T++ +I + G+ S+ + F+EM+ G NL ++I+
Sbjct: 183 FQVFEDMKQ-KHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIE 241
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEELGKLVECVEK--SNS 349
GK + D V+ L+++ E P+ L+++ T+ L ++++ + + S
Sbjct: 242 ALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMNRS 301
Query: 350 KLGYVVKLLLEEQDIEGDFKKEATELF----NSISKDVKKAYCNCLIDLCVNLNLLENAC 405
Y+VK L + EA +F NS K + A+ + L LC LE A
Sbjct: 302 IYSYLVKSL-----CKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLE-AI 355
Query: 406 KLLELGLTLEVYTDI 420
LL + + TD+
Sbjct: 356 DLLHMMPEKGIVTDV 370
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 124/242 (51%), Gaps = 2/242 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ + +S L+K +G+ NV+ M K + + ++L+ + A++ + +
Sbjct: 298 MNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDL 357
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + G+ + Y + A G+ + +++ +MK G+ V YN +++
Sbjct: 358 LHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGR 417
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG D+A E+FE M++S +C+PD T++S+I G + EA +F EM E G++P++F
Sbjct: 418 VGLVDKASELFEVMEAS-SCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVF 476
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
+ LI+C+GK+ + + + + G TP+ LL+ + + K EE KL E +
Sbjct: 477 TYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETM 536
Query: 345 EK 346
++
Sbjct: 537 KQ 538
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P+ F+ +I YG G D ++E M+A KP+++TYN+L++ +G+ +
Sbjct: 401 IIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAH 460
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++KEM + G P+ TY+ L+ +G++ E S++ EM +G ++ YN LL
Sbjct: 461 MLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCL 520
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
G T+EA +++E MK + PDS T+S
Sbjct: 521 ERRGKTEEAHKLYETMK-QQGLIPDSITYS 549
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 103 KW--RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
KW R+ + +++ + + VYEEM+ G K ++ YN LLD + +A
Sbjct: 121 KWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVD 180
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q ++++M P+ TY L+R G+A LS + EM KG L++ +NT++
Sbjct: 181 QAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTII 240
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS----------------SMITICS---- 260
D+ + M ++ CQP+ +T+S ++ ICS
Sbjct: 241 EALGKNKMVDKVIFVLSKMVEND-CQPNQFTYSITLDILATEGQLHRLNEVLDICSRFMN 299
Query: 261 -----------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
C+ G SEA +F M + + + S+++ A++T + + L+
Sbjct: 300 RSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLH 359
Query: 309 RLPELGITPD 318
+PE GI D
Sbjct: 360 MMPEKGIVTD 369
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
N++++MK G+ P++ TYN ++ + GR + +++ M + P+ TY SL+
Sbjct: 391 NLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCL 450
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ ++ +++EM+EKG V Y+ L+ + A +F++M SE C P+
Sbjct: 451 GKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEM-ISEGCTPN 509
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
T++ ++ RGK EA ++ M + G P+ + L + ++QRT
Sbjct: 510 IVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRT 561
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI G G+ D +++EM+ G P++ TY+ L++ G++ + +++
Sbjct: 439 DVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLF 498
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
EM G +PN TY LL R E+ +Y MK++G+ Y+ L
Sbjct: 499 DEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 107 DPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ F S LI+ +G + + ++++EM + G PN++TYN LLD + R + +
Sbjct: 472 DPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHK 531
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+Y+ M GL P+ TY+ L R R++
Sbjct: 532 LYETMKQQGLIPDSITYSILERLESRSQ 559
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMI 302
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 303 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 357
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 358 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 404
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 118 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 238 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQI 296
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 330
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 14 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 73
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + Y+TLL M +
Sbjct: 74 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYVEN 133
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 134 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 192
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 193 YNTLLRVYGDAE 204
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 49 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 108
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 109 GEMKAAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 168
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 169 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 227
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 228 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 287
Query: 312 ELGITPD 318
GI D
Sbjct: 288 SSGIEID 294
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA ++ EM AG PN
Sbjct: 62 KLCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNT 120
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 167
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 58/129 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 312 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 371
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G S
Sbjct: 372 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 431
Query: 214 TLYNTLLAM 222
++ +L++
Sbjct: 432 EVHFQMLSL 440
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 153/316 (48%), Gaps = 12/316 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ L++ + G V++EM+ V+P ++T+N L+ M RA+ V +YKEM+
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRARDLDAVDGLYKEMS 247
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D G+ P+ TY +L++ + R E+ + ++ EM++ G+ + ++ TL+ G +
Sbjct: 248 DVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVN 307
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
++++DM+ PD +++++ +C R + AE++ EM AG +P+ T+
Sbjct: 308 AGMDLYQDMR-VRGVMPDLVAYNALVNGLCRAR-NLKAAESIVEEMKNAGLKPDKVTYTT 365
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-----EELGKLVE-C 343
LI K + D + ++ E ++ D+ L++ +++ + L +++E
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLEN 403
+E N+ V+ + D++ FK E+ N K Y + LC L ++N
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKL-LKEMQNKGKKPGVVTYNVIMNGLC-KLGQMKN 483
Query: 404 ACKLLELGLTLEVYTD 419
A LL L + V D
Sbjct: 484 ADMLLHAMLNIGVSPD 499
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 113/224 (50%), Gaps = 3/224 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PNA F+TLI + GN + +++Y++M+ GV P+++ YN L++ + RA+ +
Sbjct: 286 VNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAE 345
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+I +EM + GL P+ TY +L+ + + + + ++M EK + L Y L++
Sbjct: 346 SIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGL 405
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G +A + +M + +PD+ T++ +I +G V + EM G +P
Sbjct: 406 SKAGRPVDAERVLREMMEAA-LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPG 464
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ ++ K + + L+ + +G++PDD LL+
Sbjct: 465 VVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLD 508
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 5/207 (2%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RA LK +S +N + D ++TLI G D +++ ++M V + +
Sbjct: 337 RARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEV 396
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY L+ + +A RP + + +EM + L P+ TY ++ A+ R + + +EM
Sbjct: 397 TYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEM 456
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ KG + V YN ++ +G A + M + PD T++ ++ GK
Sbjct: 457 QNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNI-GVSPDDITYNILLDGQCKHGK 515
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLI 291
V+ +E + + G P+ V TSLI
Sbjct: 516 VANSEELES---SKGMVPDFAVYTSLI 539
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 4/209 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ L+ A N ++ EEMK G+KP+ +TY L+D + + I ++M
Sbjct: 327 AYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKM 386
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ +S + TY +L+ +A D V REM E ++ T Y ++ G
Sbjct: 387 AEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDV 446
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
F++ ++M+ ++ +P T++ ++ G++ A+ + + ML G P+
Sbjct: 447 KTGFKLLKEMQ-NKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNI 505
Query: 290 LI--QC-YGKAQRTDDVVRALNRLPELGI 315
L+ QC +GK ++++ + +P+ +
Sbjct: 506 LLDGQCKHGKVANSEELESSKGMVPDFAV 534
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
M R + T Y ++ D G++P + L+R + R V+ EM+ + +Q +
Sbjct: 161 MSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPT 219
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V +NTL++ D ++++M S +PD +T+ ++I G++ A MF
Sbjct: 220 VVTFNTLISGMCRARDLDAVDGLYKEM-SDVGVKPDVYTYGALIKGFCRTGRMENAVKMF 278
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
NEM + G PN V T+LI + K + + + G+ PD
Sbjct: 279 NEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPD 324
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 115/218 (52%), Gaps = 1/218 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E ++ D +++LI+ + AG L++ ++M+ P++ TYN +L+ +G R +
Sbjct: 388 EGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKE 447
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ + EM GL PN TY +L+ +YG ++ + ++MK +G+Q S ++Y L
Sbjct: 448 MALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALAN 507
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A G ++A E+F+ M+ + + + + +I GK EA ++F+ +LE G
Sbjct: 508 SYAKRGLCEQAMEVFKSME-KDGVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMS 566
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ T+L++ KA++ D V ++ G TPDD
Sbjct: 567 PDVVTYTTLMKALIKAEQLDQVPDVYEQMVRAGCTPDD 604
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 42/273 (15%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
++ R + K ++ + N + NAF S L+ Y A +DG + + ++M A +K
Sbjct: 301 RAGRLDQAKAAFHNMKVEN----VPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIK 356
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN +N L+DT G+ R Q + +M G P+ T+ SL+ A+ RA + L +
Sbjct: 357 PNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDL 416
Query: 201 YREMKEKGMQLSVTLYNTLL------------AMCAD-----------VGYTD------- 230
++M+E+ S+ YN +L A+ D V YT
Sbjct: 417 LKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGT 476
Query: 231 -----EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
EA E + MK S+ QP + + ++ + RG +A +F M + G E NL
Sbjct: 477 SKRYREASEYLKQMK-SQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDGVELNLS 535
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L LI +G A + + + + E+G++PD
Sbjct: 536 MLNLLINAFGVAGKYVEAFSVFDYILEVGMSPD 568
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
E +D ++ +I Y AG+ D M+A + P++ +Y++L++T+ +R
Sbjct: 177 QEGLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLD 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ Y EM N T +LL AY R E + ++ ++ G++LS Y L+
Sbjct: 237 DAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G D+A F +MK EN +++ +S ++ + + +M +
Sbjct: 297 DAYSRAGRLDQAKAAFHNMK-VENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNI 355
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+PN F+ LI YGK R +R ++ + G PD
Sbjct: 356 KPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPD 393
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 123/284 (43%), Gaps = 6/284 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A + ++ ++ LI Y AG D + MK V N Y+ L+ R R
Sbjct: 280 AEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLM-VAYRNAR 338
Query: 159 PWQ-VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
W + K+M + + PN + L+ YG+ + + +M ++G + V +N
Sbjct: 339 QWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWN 398
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L+ G EA ++ + M+ E C P T++ ++ + E + +EM
Sbjct: 399 SLIEAHCRAGLITEALDLLKQMQERE-CVPSLHTYNIILNALGWHNRWKEMALLLDEMRF 457
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FCGCLLNVMTQTPKEE 336
G +PN+ T+L+ YG ++R + L ++ G+ P +C + + E+
Sbjct: 458 KGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQ 517
Query: 337 LGKLVECVEKSNSKLGY-VVKLLLEEQDIEGDFKKEATELFNSI 379
++ + +EK +L ++ LL+ + G + EA +F+ I
Sbjct: 518 AMEVFKSMEKDGVELNLSMLNLLINAFGVAGKY-VEAFSVFDYI 560
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 102/211 (48%), Gaps = 2/211 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++++K +GV P + YN ++ T R R + +M +G P+ Y + +A
Sbjct: 100 LFDQLKQLGVSPGPMAYNAIVGTCAREDRLETALELMNQMRGSGFQPDNVNYTLVFQACA 159
Query: 190 RARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ R G D +S V ++++G+++ LYN ++ G D+AF+ M++ + PD
Sbjct: 160 KKRVGVDVISRVCANIEQEGLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQAC-DLVPD 218
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
++SS+I ++ +AEA + EM ++ NL L +L+ Y + + V + +
Sbjct: 219 VRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQ 278
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+ G+ G L++ ++ + + K
Sbjct: 279 DAEDAGLKLSTFSYGLLIDAYSRAGRLDQAK 309
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 113/229 (49%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK++D + P+AF+ L+ ++G +G +Y+EM + KP+ ITYN +
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ ++ ++ + + ++ + P TY L+ + E+ + ++ EM + G
Sbjct: 865 ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ + ++N L+ +G T+ A ++F+ M +E +PD +++ ++ G+V EA
Sbjct: 925 KPNCAIFNILINGYGKIGDTETACQLFKRM-VNEGIRPDLKSYTILVDCLCLAGRVDEAL 983
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
FNE+ G +P+ +I GK+QR ++ + N + GI PD
Sbjct: 984 YYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD 1032
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K + ++ + + D F+ L+ + A +FD ++ M+ G+ PN+ TYN L+
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ RA R + M G+ P TY + +G++ + + +MK KG+ +
Sbjct: 412 LLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN 471
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ N L A++G EA +F ++ + PDS T++ M+ S G+V EA +
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLREN-GLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+EM+ G EP++ V+ SLI KA R D+ + +R+ ++ ++P
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + P A++ I +G +G + +E+MKA G+ PN++ N L ++ R
Sbjct: 429 ESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRL 488
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ KT++ + +NGL+P+ TY +++ Y + ++ +++ EM G + V + N+L
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G DEA+++F+ MK + P T++++++ G+V +A +F M+E
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMK-LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN +L+ C+ K + ++ +++ + PD
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPD 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R + ++ +++ LI L +G L VY M + G+KP++ TY+ L+ +G+ +
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
V + KEM D GL PN T+ +R GRA ++ ++R M ++G + Y
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 218 TLLAMCADVGYTDEAFEIFEDMKS----------------------------------SE 243
L+ + G + A E+F MK+ ++
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD 361
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
PD TF+ ++ + EA A F+ M + G PNL +LI +A R +D
Sbjct: 362 GYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSK 350
++ L + +G+ P ++ ++ E GK VE EK +K
Sbjct: 422 LKLLGTMESVGVQPTAYTYNIFIDYFGKSG--ETGKAVETFEKMKAK 466
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TL+ + G+ D + +M+A G P+++T+ L+D + +A+ + +
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +TY +L+ RA ED L + M+ G+Q + YN +
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKS 450
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T +A E FE MK ++ P+ ++ + + G++ EA+ MFN + E G P+
Sbjct: 451 GETGKAVETFEKMK-AKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++CY K + D+ V L+ + G PD
Sbjct: 510 YNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 12/256 (4%)
Query: 70 TGSSPKSYIW-----VNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAG 122
G +P ++ + V+ KS + ++L E + +R R P+A ++ +I +
Sbjct: 817 VGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR----RCKPDAITYNIVISSLAKSN 872
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
N D L+ + ++ + +P TY L+D + + R + +++EM+D G PN +
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
L+ YG+ E +++ M +G++ + Y L+ G DEA F ++KS+
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
PD ++ +I ++ EA A++NEM G P+L+ SL+ G A +
Sbjct: 993 -GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051
Query: 303 VVRALNRLPELGITPD 318
R L G+ PD
Sbjct: 1052 AKRMYEELQLAGLEPD 1067
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + + T+ K G V +M+ G N +YN L+ + ++ +
Sbjct: 154 RRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALE 213
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y+ M GL P+ TY++L+ A G+ R E + + +EM++ G++ +V + + +
Sbjct: 214 VYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLG 273
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G DEA+EIF M E C PD T++ +I G++ A+ +F +M G +P+
Sbjct: 274 RAGKIDEAYEIFRRM-DDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ +L+ + D +++ G PD L++V+ +
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R P + LI G + + ++EEM G KPN +N L++ G+
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++K M + G+ P+ +Y L+ A ++ L + E+K G+ YN ++
Sbjct: 949 QLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGL 1008
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++ +M++ PD +T++S++ G V +A+ M+ E+ AG EP+
Sbjct: 1009 GKSQRMEEALALYNEMRN-RGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067
Query: 284 LFVLTSLIQCY 294
+F +LI+ Y
Sbjct: 1068 VFTYNALIRGY 1078
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K +G+ P + +YN L+ + + ++K+M + G +P+ T+ LL +G++
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ +Y+EM + + YN +++ A D+A + F D+ SS+ +P T+
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD-FRPTPRTYGP 898
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I + G++ EA +F EM + G +PN + LI YGK T+ + R+ G
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 315 ITPD 318
I PD
Sbjct: 959 IRPD 962
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 11/163 (6%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R NE R D +++ L+ AG D L + E+K+ G+ P+ I YN +++ +G+++
Sbjct: 953 RMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQ 1012
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + +Y EM + G+ P+ TY SL+ G A E +Y E++ G++ V YN
Sbjct: 1013 RMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYN 1072
Query: 218 TLLAMCADVGYT-----DEAFEIFEDMKSSENCQPDSWTFSSM 255
L+ GY+ + A+ ++++M + C P+ T++ +
Sbjct: 1073 ALIR-----GYSLSENPEHAYTVYKNM-MVDGCNPNIGTYAQL 1109
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 94/179 (52%), Gaps = 3/179 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ LI YG G+ + +++ M G++P++ +Y L+D + A R +
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ GL P++ Y ++ G+++ E+ L++Y EM+ +G+ + YN+L+
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++A ++E+++ + +PD +T++++I S A ++ M+ G PN+
Sbjct: 1046 AGMVEQAKRMYEELQLA-GLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNI 1103
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 121/287 (42%), Gaps = 13/287 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++LI AG D +++ MK + + P ++TYN LL +G+ R + ++
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + SPN ++ +LL + + E L ++ +M + V YNT++
Sbjct: 601 ESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE-MLEAGFEPNLF 285
+ AF F +K S PD T +++ G++ +A ++ + M + F N
Sbjct: 661 NKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRS 718
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
L+ D + L GI +D F L+ V+ + +E + +
Sbjct: 719 FWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYA--YQIFD 776
Query: 346 KSNSKLGYVVKL----LLEEQDIEGDFKKEATELFNSISKDVKKAYC 388
K KLG L L + +E + ++A +LF KD+K C
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLF----KDMKNVGC 819
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
K+ G+ ++ YN L+ +V YT++A+++F+DMK+ C PD++TF+ ++ + GK
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV-GCAPDAFTFNMLLAVHGKSGK 838
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
++E ++ EM+ +P+ +I K+ D + L P R G
Sbjct: 839 ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898
Query: 325 LLNVMTQTPK-EELGKLVE 342
L++ + + + EE +L E
Sbjct: 899 LIDGLAKVGRLEEAMRLFE 917
>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 426
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 237 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 398
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ J ++ T N ++D G+ + +
Sbjct: 112 PNTXSYSTLLTMYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 232 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQI 290
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 291 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFSEMREJK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 GEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
GI D
Sbjct: 282 SSGIEID 288
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
GLSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + + +A
Sbjct: 4 GLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
IF +K S PD +++MI + EA ++ EM AG PN ++L+
Sbjct: 64 ISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLT 122
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
Y + ++ + + + + EJ D C +++V Q
Sbjct: 123 MYVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQ 161
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 306 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 365
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G
Sbjct: 366 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 420
>gi|224144700|ref|XP_002325381.1| predicted protein [Populus trichocarpa]
gi|222862256|gb|EEE99762.1| predicted protein [Populus trichocarpa]
Length = 1071
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 1/229 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R+ ++ +D A++ IK AG ++YE M +G P++ TYN ++ GR +
Sbjct: 759 RSIQDRMELDTVAYNIFIKAMLEAGRLHFATSIYEHMLLLGFTPSIQTYNTMISVYGRGR 818
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + ++ +G+S + Y +++ YG+A + ++ +M+E+G++ V YN
Sbjct: 819 KLDKAVEVFNTACSSGVSLDEKAYMNMINYYGKAGKRHEASLLFAKMQEEGIKPGVVSYN 878
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+ + A G E E+F+ M+ + C PDS+T+ S++ S K EAE N M +
Sbjct: 879 VMAKVYAMSGLYHEVEELFKVME-RDGCPPDSFTYLSLVQAYSESSKCLEAEETINAMQK 937
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
G P+ L+ KA + R L G+ PD C +L
Sbjct: 938 KGIPPSCAHFKHLLYALVKAGLMVEAERVYMELLSAGLNPDLVCCRAML 986
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 137/304 (45%), Gaps = 10/304 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A T++ Y G+ + Y +K G+ ++ YN +L ++ + +V ++
Sbjct: 221 DEVACGTMLCSYARWGHHKAMFSFYSAIKERGIVVSIAVYNFMLSSLQKKSLHGKVIVLW 280
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D ++PN TY ++ + + ++ + EM+ G+ +Y+ L+ +
Sbjct: 281 RQMVDKRVAPNNFTYTVVISSLVKEGLHKEAFKTFNEMRTMGLVPEEVIYSLLITVSTKN 340
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +++EDM+ S P +T +S++T+ S+A ++F +M + +
Sbjct: 341 SNWHEALKLYEDMR-SHRIVPSKFTCASLLTMYYKIKDYSKALSLFIQMQSKNIAADEVI 399
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-MTQTPKEELGKLVECVE 345
LI+ YGK +D + G+ +++ + V ++ E+ ++E ++
Sbjct: 400 YGLLIRIYGKLGLYEDAQKTFEETERSGLLSNEKTYLAMAQVHLSSGNFEKALSVIEVMK 459
Query: 346 KSN---SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD--VKKAYCNCLIDLCVNLNL 400
N S+ Y+V LL+ ++ D A F ++SK C+ +I+L V L
Sbjct: 460 SRNIWLSRFAYIV--LLQCYCMKEDL-DSAEVTFQALSKIGCPDAGSCSDMINLYVRLGF 516
Query: 401 LENA 404
E A
Sbjct: 517 TEKA 520
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 1/188 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++I Y LL G+ + + + EM + G P+ ++L +Y R + + S
Sbjct: 185 PSVIVYTILLRIYGQVGKIKLAEQTFLEMLEVGCEPDEVACGTMLCSYARWGHHKAMFSF 244
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
Y +KE+G+ +S+ +YN +L+ + ++ M + P+++T++ +I+
Sbjct: 245 YSAIKERGIVVSIAVYNFMLSSLQKKSLHGKVIVLWRQM-VDKRVAPNNFTYTVVISSLV 303
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
G EA FNEM G P + + LI K + ++ + I P
Sbjct: 304 KEGLHKEAFKTFNEMRTMGLVPEEVIYSLLITVSTKNSNWHEALKLYEDMRSHRIVPSKF 363
Query: 321 FCGCLLNV 328
C LL +
Sbjct: 364 TCASLLTM 371
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 93/219 (42%), Gaps = 1/219 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ L+++YG G + EM +G +P+ + +L + R + + Y +
Sbjct: 189 VYTILLRIYGQVGKIKLAEQTFLEMLEVGCEPDEVACGTMLCSYARWGHHKAMFSFYSAI 248
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G+ + Y +L + + + ++R+M +K + + Y +++ G
Sbjct: 249 KERGIVVSIAVYNFMLSSLQKKSLHGKVIVLWRQMVDKRVAPNNFTYTVVISSLVKEGLH 308
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EAF+ F +M++ P+ +S +IT+ + EA ++ +M P+ F S
Sbjct: 309 KEAFKTFNEMRTM-GLVPEEVIYSLLITVSTKNSNWHEALKLYEDMRSHRIVPSKFTCAS 367
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
L+ Y K + + ++ I D+ G L+ +
Sbjct: 368 LLTMYYKIKDYSKALSLFIQMQSKNIAADEVIYGLLIRI 406
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 99 ARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
A+ ++ I P +++ + K+Y +G + +++ M+ G P+ TY +L+ +
Sbjct: 863 AKMQEEGIKPGVVSYNVMAKVYAMSGLYHEVEELFKVMERDGCPPDSFTYLSLVQAYSES 922
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + + M G+ P+ + LL A +A + VY E+ G+ +
Sbjct: 923 SKCLEAEETINAMQKKGIPPSCAHFKHLLYALVKAGLMVEAERVYMELLSAGLNPDLVCC 982
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+L D G+ ++ + +E ++ E + D + S+ + + GK EAE +F M
Sbjct: 983 RAMLRGYMDYGHVEKGIKFYEQIR--ELVKADRFIMSAAVHLYKSAGKKLEAEVLFESM 1039
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/311 (18%), Positives = 123/311 (39%), Gaps = 38/311 (12%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A ++ LY GNF + + G ++++ L+++ R ++ + +
Sbjct: 596 DTTALGLILSLYLENGNFTKTEEFLKLILEAGSGLSVVS--QLVNSFIREGDLFKAEAVN 653
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ G T ASL+ AYGR + V+ + + + L + N+++ C
Sbjct: 654 GQLIKLGSKLEDETIASLISAYGRQNKLKQAQEVFAAVADSPI-LGNPIINSMIDACVKC 712
Query: 227 GYTDEAFEIFEDMKS-------------------------SENC---------QPDSWTF 252
G +EA+ ++E++ +EN + D+ +
Sbjct: 713 GKFEEAYLLYEEVAQRGHNLGAVGIGMVVNALTNSGKHPEAENIIRRSIQDRMELDTVAY 772
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ I G++ A +++ ML GF P++ ++I YG+ ++ D V N
Sbjct: 773 NIFIKAMLEAGRLHFATSIYEHMLLLGFTPSIQTYNTMISVYGRGRKLDKAVEVFNTACS 832
Query: 313 LGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKE 371
G++ D++ ++N + K E L +++ K G V ++ + E
Sbjct: 833 SGVSLDEKAYMNMINYYGKAGKRHEASLLFAKMQEEGIKPGVVSYNVMAKVYAMSGLYHE 892
Query: 372 ATELFNSISKD 382
ELF + +D
Sbjct: 893 VEELFKVMERD 903
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 21/145 (14%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAI---GVKPNMITYNNLLDTMGRAKRPWQV 162
P++F+ +L++ Y + CL E + A+ G+ P+ + +LL + +A +
Sbjct: 907 PDSFTYLSLVQAYSESSK---CLEAEETINAMQKKGIPPSCAHFKHLLYALVKAGLMVEA 963
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG------MQLSVTLY 216
+ +Y E+ GL+P+ ++LR Y + E + Y +++E M +V LY
Sbjct: 964 ERVYMELLSAGLNPDLVCCRAMLRGYMDYGHVEKGIKFYEQIRELVKADRFIMSAAVHLY 1023
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKS 241
+ G EA +FE MKS
Sbjct: 1024 KS-------AGKKLEAEVLFESMKS 1041
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 1/225 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI N + + VY +M A +P++ TYN ++ GR + ++
Sbjct: 268 DIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLF 327
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K++ G P+ TY SLL A+ R + + +M + G YNT++ M
Sbjct: 328 KDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKR 387
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D AF+++ DMK S PD+ T++ +I + EA + +EML A +P L
Sbjct: 388 GQHDLAFQLYSDMKLSGR-SPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRT 446
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++LI Y KA + + + + GI PD +L+++ +
Sbjct: 447 FSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 491
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 9/296 (3%)
Query: 68 GKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNF--D 125
G T + + V ++ R +K++E R+R D +F+TLI +G +
Sbjct: 194 GNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRG--CEPDLVSFNTLINARLKSGTMVTN 251
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + E++ G++P++ITYN L+ R + +Y +M + P+ TY +++
Sbjct: 252 LAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMI 311
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
YGR + ++++++ KG YN+LL A G D+ EI EDM
Sbjct: 312 SVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDM-VKMGF 370
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
D T++++I + RG+ A ++++M +G P+ T LI GKA +
Sbjct: 371 GKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAE 430
Query: 306 ALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGKLVECVEKSNSK---LGYVVKL 357
++ + + P R F + + E + +C+ +S K L Y V L
Sbjct: 431 VMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVML 486
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I +YG G D +Y +MK G P+ +TY L+D++G+A + +
Sbjct: 373 DEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVM 432
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + + P T+++L+ Y +A
Sbjct: 433 SEMLNARVKPTLRTFSALICGYAKA----------------------------------- 457
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA E F+ M S +PD +S M+ I + +A ++ EM+ F+P+ +
Sbjct: 458 GKRVEAEETFDCMLRS-GIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHAL 516
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+++ GK R +DV + + + EL C L+
Sbjct: 517 YEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILV 556
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 94/500 (18%), Positives = 187/500 (37%), Gaps = 110/500 (22%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
E+++D R+ + D A+S ++ + + +Y+EM KP+ Y +L
Sbjct: 464 EETFDCMLRS-GIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLR 522
Query: 152 TMGRAKRPWQVKTIYKEMTD-NGLSPN-----------WNTYASLLR----------AYG 189
+G+ R V + K+M + G++ ++ A++LR YG
Sbjct: 523 VLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDQYG 582
Query: 190 RAR-------------------------YGEDTLSVYRE-------------MKEKGMQL 211
+AR + + ++R MKE G++
Sbjct: 583 KARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEP 642
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ + L+ + G +EA ++ +++K E + +SS+I G + A
Sbjct: 643 TIATMHLLMVSYSGSGQPEEAEKVLDNLKV-EGLPLSTLPYSSVIDAYLKNGDHNVAIQK 701
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
EM + G EP+ + T ++ +Q T + + L L + G R ++T+
Sbjct: 702 LMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLPIR-------LLTE 754
Query: 332 TPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCL 391
+ ++ C+E KLG + E FN + N L
Sbjct: 755 KSDSLVSEVDNCLE----KLGPL----------------EDNAAFN---------FVNAL 785
Query: 392 IDLCVNLNLLENACKLLELGLTLEVYT-DIQSRSPTQWSLHLKSLSLGAALTALHIWIND 450
DL L A + +L + +Y D+ + W + +S G+AL L +W++
Sbjct: 786 EDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDH 845
Query: 451 LS---------KALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDSPD 501
+ +L+ P + + TG +Y+ L S ++ L E+ +PF
Sbjct: 846 MQAKYFYFWQDASLQGYPLSPKSVVLITGTA--EYNMVSLNSTLKAFLWEMGSPFLPCKT 903
Query: 502 KVGWFLTTEAAAKSWLESRS 521
+ G + + + WL+ S
Sbjct: 904 RSGLLVAKAHSLRMWLKDSS 923
>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
duartei]
Length = 381
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 137 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 196
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 197 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQILFQTMI 256
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 257 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQXIDAGE 311
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 312 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 358
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 72 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 131
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 132 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 191
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 192 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQI 250
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 251 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 284
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K +G P+++ YN +++ G+AK + +++
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 63 GEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 181
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 182 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLR 241
Query: 312 ELGITPD 318
G+ D
Sbjct: 242 SSGVEID 248
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 266 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQXIDAGEVKDITVFERMIHLL 325
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G
Sbjct: 326 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 380
>gi|410110075|gb|AFV61117.1| pentatricopeptide repeat-containing protein 123, partial
[Burroughsia fastigiata]
Length = 348
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 120 KMGIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 179
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G ++ L+ T++
Sbjct: 180 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMI 239
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 240 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 294
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 295 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 341
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 53 VTPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 112
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +L+R YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 113 KLFWGMRKMGIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIY 172
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 173 GKTLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEID 231
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 232 QILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 267
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 97/196 (49%), Gaps = 1/196 (0%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ ++++ +K+ G P+++ YN ++ G+AK + +++ EM G++PN +Y+
Sbjct: 2 DYSKAISIFSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYS 61
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+LL Y + + LSV+ EM+E L +T N ++ + +G EA ++F M+
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+P+ ++++++ + EA +F M E N+ S+I YGK +
Sbjct: 122 -GIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEK 180
Query: 303 VVRALNRLPELGITPD 318
+ + GI P+
Sbjct: 181 ANNLIQEMQSRGIEPN 196
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 126/269 (46%), Gaps = 12/269 (4%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R++ + +S LI G + + ++++M G +PN++ Y+ ++D + R +P + K
Sbjct: 358 YRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAK 417
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I M +G PN TY+SL++ + + E+ + V+REM E G + Y+ L+
Sbjct: 418 EILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGL 477
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML---EAGF 280
VG EA ++ M + +PD+ +SSMI G + A +++EML E
Sbjct: 478 CGVGRVKEAMMVWSKMLTI-GIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+P++ L+ + V LN + + G PD C LN +++
Sbjct: 537 QPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKS------- 589
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFK 369
+ E+ S L +V LL+ Q + G K
Sbjct: 590 -DSCEEGRSFLEELVARLLKRQRVSGACK 617
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TLI G D +++ E M + PN +TY L++ + + +R +
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARL 349
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + G N + Y+ L+ + E+ ++++++M EKG + ++ +Y+ ++
Sbjct: 350 LISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCR 409
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA EI M SS C P+ +T+SS++ G EA ++ EM E G N F
Sbjct: 410 EGKPNEAKEILNGMISS-GCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEF 468
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI R + + +++ +GI PD
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 107/215 (49%), Gaps = 2/215 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P ++ LI G+ + + M G PN +TYN L+ + + + ++ +
Sbjct: 257 PVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M + PN TY +L+ + R D + M+E+G +L+ +Y+ L++ G
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEG 376
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+EA +++ M + + C+P+ +S++I GK +EA+ + N M+ +G PN++
Sbjct: 377 KAEEAMTLWKKM-AEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTY 435
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
+SL++ + K +++ ++ + E G + ++ FC
Sbjct: 436 SSLMKGFFKTGLSEEAIQVWREMDETGCSRNE-FC 469
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 121/284 (42%), Gaps = 11/284 (3%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTM-- 153
+R R E I +F + + YG A + ++++ M K ++ ++N++L+ +
Sbjct: 101 SRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIIN 160
Query: 154 -GRAKRPWQV-KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
G R + + + +SPN ++ +++A + + + + V+R M EK
Sbjct: 161 EGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLP 220
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
Y TL+ DEA + ++M+S E C P ++ +I +G +S +
Sbjct: 221 DGYTYCTLMDGLCKEERIDEAVLLLDEMQS-EGCSPSPVIYNVLIDGLCKKGDLSRVTKL 279
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ M G PN +LI + D V L R+ P+D G L+N + +
Sbjct: 280 VDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 332 TPKEELG-KLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATE 374
+ G +L+ +E+ +L + +L I G FK+ E
Sbjct: 340 QRRAMDGARLLISMEERGYRLNQHIYSVL----ISGLFKEGKAE 379
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TL+ Y G + ++ ++MK G++P++++Y ++D +AK + K
Sbjct: 308 DLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYL 367
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ D GL PN Y +L+ YGR + MK G+Q + Y +L+
Sbjct: 368 TELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHA 427
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA IF + + N ++ MI GK+ EA A F EM G PN
Sbjct: 428 GLVEEAKTIFSQAREN-NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 486
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
T+L+ Y K+ +++ + + + G+ PD+ G L+
Sbjct: 487 YTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ +++ +IK AG D + E+ G++P ++TYN L+D + ++ R + +
Sbjct: 9 LNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRL 68
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRA-RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
M G++P+ T+ L+ R R+GE + V +EM++ G+ + +YN L+
Sbjct: 69 KGRMEQGGMTPSVVTFGILINGLARGERFGEVGI-VLQEMEQLGVSPNEVIYNELIGWHC 127
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN- 283
G+ +A +F++M + +P + T++ + G++ AE + +ML G +
Sbjct: 128 RKGHCSQALRLFDEM-VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 186
Query: 284 -LF--VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
LF V+ L+Q + +R + VV N + G+ P+D
Sbjct: 187 GLFNTVVAWLLQ---RTRRLESVVSITNEMVTRGMRPND 222
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K K Y T + + + ++ LI YG G+ G ++ E MK+ G++P +TY +L+
Sbjct: 362 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 421
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
M A + KTI+ + +N + Y +++ Y + + ++ + EM+ +G+
Sbjct: 422 YWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGIS 481
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+ Y TL+ + G ++EA ++F++M S PD+ T+ ++I CS +G
Sbjct: 482 PNKLTYTTLMYAYSKSGNSEEASKLFDEMVGS-GVIPDNITYGTLIARCSEKG 533
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 99/205 (48%), Gaps = 4/205 (1%)
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
T+ + K + + + M + G+ + TY ++R + E+ + ++ +M +G +
Sbjct: 248 TLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKP 307
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEA 270
+ +NTLL ++G +E F + + MK +E QPD ++ ++I C+ K + +A+
Sbjct: 308 DLFTFNTLLHAYCNLGKMEETFHLLDQMK-TEGLQPDIVSYGTIID-GHCKAKDIRKAKE 365
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
E+++ G +PN+F+ +LI YG+ + A+ + GI P + G L+ M
Sbjct: 366 YLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMC 425
Query: 331 QTP-KEELGKLVECVEKSNSKLGYV 354
EE + ++N LG +
Sbjct: 426 HAGLVEEAKTIFSQARENNVDLGVI 450
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ + E + D ++ T+I + A + E+ G+KPN+ YN L+ GR
Sbjct: 334 QMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNG 393
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ M NG+ P TY SL+ A E+ +++ + +E + L V Y
Sbjct: 394 DISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYT 453
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
++ +G EA FE+M+ S P+ T+++++ S G EA +F+EM+
Sbjct: 454 IMIQGYCKLGKMVEAVAYFEEMR-SRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVG 512
Query: 278 AGFEPNLFVLTSLI-QCYGKAQRT 300
+G P+ +LI +C K +T
Sbjct: 513 SGVIPDNITYGTLIARCSEKGGKT 536
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
M+ S N + +++++MI GKV M E+ AG +P + L+ K+
Sbjct: 1 MRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 60
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK 346
R ++ R R+ + G+TP G L+N + + + E+G +++ +E+
Sbjct: 61 RVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQ 109
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
RN + P S ++++ G A + ++ ++K +P YN+++ + +
Sbjct: 117 VRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQ 176
Query: 159 PWQVKTIYKEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+V +Y EM+ G P+ TY++L+ A+ + + + + EMKE GMQ + +Y
Sbjct: 177 YEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYT 236
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+A+ A +FE+M+ + C+PD +T++ +I G++ EA F EM
Sbjct: 237 MLIALFFKFNDAHGALSLFEEMR-HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQR 295
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P+ + ++I GKA R DD ++ + L P
Sbjct: 296 EGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIP 335
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 4/235 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-R 158
+ E R D + +I G AG D + +++EM+ + P+++TYN ++ + +K R
Sbjct: 294 QREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSR 353
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+V + ++ M ++G+SP+ TY+ L+ + + E + + EM EKG Y +
Sbjct: 354 ASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCS 413
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSW-TFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ D A E+F+++K ENC S ++ MI G++ +A MF+EM +
Sbjct: 414 LIDALGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNK 471
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
G P+++ +L+ + D+ + + R+ E G PD +LN + +T
Sbjct: 472 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKT 526
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + G D + + EMK IG++P Y L+ + +++
Sbjct: 196 DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF 255
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM P+ TY L+R G+A ++ + EM+ +G + N ++
Sbjct: 256 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 315
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++F++M++ C P T++++I + + + SE + F M E+G P+ F
Sbjct: 316 GRLDDAMKLFQEMETL-RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 374
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ LI + K R + + L + E G P
Sbjct: 375 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPP 406
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A +D +++E+K + Y ++ +G+A R ++
Sbjct: 408 PAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFD 467
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G +P+ Y +L+ R ++ LS R M+E G + YN +L A G
Sbjct: 468 EMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTG 527
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+ +MK S +PD ++++++ S G EA + EM GFE +L
Sbjct: 528 GPHRAMEMLSNMKQS-TVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITY 586
Query: 288 TSLIQCYGKA 297
+S+++ GK
Sbjct: 587 SSILEAIGKV 596
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
A++++I + G ++ +Y EM G P+ +TY+ L+ + R +
Sbjct: 162 QAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLN 221
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM + G+ P Y L+ + + LS++ EM+ + + V Y L+ G
Sbjct: 222 EMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAG 281
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA+ F +M+ E C+PD+ ++MI G++ +A +F EM P++
Sbjct: 282 RIDEAYHFFCEMQ-REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTY 340
Query: 288 TSLIQC-YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
++I+ + R +V R+ E GI+P L++ +T + E
Sbjct: 341 NTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRME 390
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 94/226 (41%), Gaps = 36/226 (15%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS-LLRAYGRARYGEDTLSVYRE 203
TY L+ + ++ ++ + +EM N + T S ++R G A+ ++++ +
Sbjct: 92 TYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQ 151
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+K + Q YN+++ M G ++ +++ +M + +C PD+ T+S++I+ G
Sbjct: 152 IKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLG 211
Query: 264 KVSEAEAMFNEMLEAGFE-----------------------------------PNLFVLT 288
+ A + NEM E G + P++F T
Sbjct: 212 RRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 271
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
LI+ GKA R D+ + G PD F ++N + + +
Sbjct: 272 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGR 317
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 69 KTGSSPKSYIWVNPKS--PRASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFD 125
K G +P Y + S R L E R E I D N+++ ++ G
Sbjct: 471 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 530
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + MK V+P++++YN +L + A + + KEM G + TY+S+L
Sbjct: 531 RAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSIL 590
Query: 186 RAYGRA 191
A G+
Sbjct: 591 EAIGKV 596
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 121/250 (48%), Gaps = 3/250 (1%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
KL +++D + I P+ +S LI + G + ++++ +M +KP++ T+
Sbjct: 239 KLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTF 298
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L++ + + + KT++ M G+ PN+ TY SL+ Y + S++ M +
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ + Y+ ++ + DEA +F++M +N PD T+SS+I S G++S
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM-HRKNIIPDVVTYSSLIDGLSKSGRIS 417
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
A + ++M + G P + S++ K + D + L +L + GI P+ L+
Sbjct: 418 YALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477
Query: 327 NVMTQTPKEE 336
+ Q+ K E
Sbjct: 478 KGLCQSGKLE 487
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 103/221 (46%), Gaps = 1/221 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLIK G ++++ A+G + I+Y L+ + + +
Sbjct: 154 DTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLL 213
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + N + PN Y +++ + + + + ++ EM KG+ V Y+ L++ +
Sbjct: 214 QRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCIL 273
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A ++F M EN +PD +TF+ ++ GK+ E + +F+ M++ G +PN
Sbjct: 274 GKLNDAIDLFNKM-ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
SL+ Y + + N + + G+ PD + ++N
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMIN 373
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ D ++ TLI G L++ + + V+PN++ YN ++D+M + K +
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
++ EM G+SP+ TY++L+ + D + ++ +M + ++ V +N L+ A
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C D G E +F DM + +P+ T++S++ +V++A+++FN M + G P
Sbjct: 306 CKD-GKMKEGKTVF-DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + +I + K ++ D+ + + I PD
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E + D F+ L+ + G V++ M G+KPN +TYN+L+D K +
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
K+I+ M G++P+ +Y+ ++ + + + ++ +++++EM K + V Y++L+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ G A ++ + M P T++S++ +V +A A+ ++ + G +
Sbjct: 409 GLSKSGRISYALQLVDQM-HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQ 467
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
PN++ + LI+ ++ + +D + L
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGL 496
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 103/212 (48%), Gaps = 3/212 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S +I + FD +N+++EM + P+++TY++L+D + ++ R +
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M D G+ P TY S+L A + + +++ ++K+KG+Q ++ Y+ L+
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQS 483
Query: 227 GYTDEAFEIFED-MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A ++FE + N D++T MI G +EA A+ ++M + G P+
Sbjct: 484 GKLEDARKVFEGLLVKGHNLNVDTYTI--MIQGFCVEGLFNEALALLSKMEDNGCIPDAK 541
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+I K D + L + G+ P
Sbjct: 542 TYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 3/220 (1%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ L + ++M+ G+KPN++ N L++ + +++ ++ G P+ T+
Sbjct: 100 HYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFT 159
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+L++ + + ++ G Y TL+ VG T A ++ + + +
Sbjct: 160 TLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGN 219
Query: 243 ENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
QP+ ++++I ++C + V+EA +F+EM+ G P++ ++LI + + +
Sbjct: 220 L-VQPNVVMYNTIIDSMCKVK-LVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLN 277
Query: 302 DVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
D + N++ I PD L+N + K + GK V
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 150/319 (47%), Gaps = 17/319 (5%)
Query: 109 NAFS---TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+AFS L+ L+ + + + EM+ GV P I+ NLL MG +V
Sbjct: 117 DAFSYNRILVLLFSNRADPAEAMRLIAEMERDGV-PGNISTVNLLVGMG-----VEVGRC 170
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ GL N TY L++A+ R+R VY +M+ KG +L + YN LL A
Sbjct: 171 LDLASKWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAK 230
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A+++FEDMK + C PD++T++ +I + GK ++ ++ EM+ G NL
Sbjct: 231 AGMVDQAYQVFEDMKQNY-CDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLI 289
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
++I+ GK + D+ + L+++ E P+ +L+V++ +L +L E ++
Sbjct: 290 AYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLST--GGQLHRLNEILD 347
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELF----NSISKDVKKAYCNCLIDLCVNLNLL 401
+ L V L + + EA +F NS K + A+ + L LC N
Sbjct: 348 ICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALC-NAEKT 406
Query: 402 ENACKLLELGLTLEVYTDI 420
A LL + + TD+
Sbjct: 407 TEAIDLLHMMPEKGITTDV 425
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 111/225 (49%), Gaps = 1/225 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S LIK +G+ +V+ M K + + ++L+ + A++ + + M
Sbjct: 357 VYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMM 416
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G++ + Y + A G+ + S+Y M+ G+ V YN +++ VG
Sbjct: 417 PEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLV 476
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D+A E+FE+M+ +C+PD T++SMI G + EA +F +M E G++P++F +
Sbjct: 477 DKASELFEEMEDG-SCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSI 535
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
LI+C+GK+ + D + + G P+ LL+ + + K
Sbjct: 536 LIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGK 580
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R N + D AF ++++ A +++ M G+ ++ YN + +G+ K
Sbjct: 380 RMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLK 439
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + ++Y M NG+ P+ TY ++ ++GR + ++ EM++ + V YN
Sbjct: 440 QVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYN 499
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+++ G DEA +F+DM+ + PD +T+S +I KV A ++F+EM+
Sbjct: 500 SMINCLGKNGDLDEAHMLFKDMQ-EKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVA 558
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G PN+ L+ C + +T + + L + G+TPD
Sbjct: 559 QGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPD 599
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 35/250 (14%)
Query: 103 KW--RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
KW R++ + L++ + + VYE+M+ G K ++ YN LL+ + +A
Sbjct: 176 KWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVD 235
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q ++++M N P+ TY L+R G+A +S+ EM +G L++ YNT++
Sbjct: 236 QAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVI 295
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM----------------ITICS---- 260
DEA + M S+ C+P+ +T+S M + ICS
Sbjct: 296 EALGKNKMVDEAIFMLSKMIESD-CRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLN 354
Query: 261 -----------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
C+ G SEA ++F M + + + + S+++ A++T + + L+
Sbjct: 355 RPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLH 414
Query: 309 RLPELGITPD 318
+PE GIT D
Sbjct: 415 MMPEKGITTD 424
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++Y+ M+A GV P++ TYN ++ + GR + +++EM D P+ TY S++
Sbjct: 446 SLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCL 505
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ ++ ++++M+EKG V Y+ L+ D A +F++M ++ C P+
Sbjct: 506 GKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM-VAQGCIPN 564
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
T++ ++ RGK +EA + + + G P+ + L + ++QRT
Sbjct: 565 IVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDSITYSILERLESRSQRT 616
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 11/172 (6%)
Query: 89 KLKEKS-----YDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
KLK+ S YDT N + P+ F+ +I +G G D ++EEM+ KP
Sbjct: 437 KLKQVSFMSSLYDTMRANG---VVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKP 493
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++TYN++++ +G+ + ++K+M + G P+ TY+ L+ +G++ + S++
Sbjct: 494 DVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLF 553
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
EM +G ++ YN LL G T EA + +E +K + PDS T+S
Sbjct: 554 DEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLK-QQGLTPDSITYS 604
>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
brasiliensis]
Length = 382
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 138 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 197
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 198 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 258 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 312
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 313 VKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLN 359
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 73 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 132
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 133 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 192
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 193 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 251
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 285
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 182
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 183 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 242
Query: 312 ELGITPD 318
G+ D
Sbjct: 243 SSGVEID 249
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 326
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E G
Sbjct: 327 SKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 381
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 5/259 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
S L EK+ A K+ + P+A ++ I AGN + +++ MK +P+ T
Sbjct: 196 SGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTET 255
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L++ G+A + + ++ EM PN TY +L+ A+ R E ++ +++
Sbjct: 256 YTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 315
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
E G + V YN L+ + G+ A EIF M+ C+PD +++ M+ G
Sbjct: 316 EDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRGGLH 374
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+A+A+F EM G P + L+ Y KA +N L E G+ PD +
Sbjct: 375 EDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSM 434
Query: 326 LNVMTQTPKEELGKLVECV 344
LN+ + + GK+ E +
Sbjct: 435 LNLYGRLG--QFGKMEEVL 451
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L+K Y T+G + ++ EM+ G+ P+ I YN +D + +A P + I++
Sbjct: 184 DTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQR 243
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + P+ TY L+ +G+A L ++ EM+ + + ++ Y L+ A G
Sbjct: 244 MKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGL 303
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A EIFE ++ + +PD + +++++ S G A +F+ M G EP+
Sbjct: 304 CEKAEEIFEQLQEDGH-EPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYN 362
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
++ YG+ +D + LGITP
Sbjct: 363 IMVDAYGRGGLHEDAQAVFEEMKRLGITP 391
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 4/204 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI L+G A L ++ EM++ KPN+ TY L++ R + + I++++
Sbjct: 256 YTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 315
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G P+ Y +L+ AY RA + ++ M+ G + YN ++ G +
Sbjct: 316 EDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHE 375
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A +FE+MK P + +++ S G V++ E + NE+ E+G EP+ FVL S+
Sbjct: 376 DAQAVFEEMKRL-GITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSM 434
Query: 291 IQCYGKA---QRTDDVVRALNRLP 311
+ YG+ + ++V+ A+ P
Sbjct: 435 LNLYGRLGQFGKMEEVLTAMESGP 458
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R++K + + ++ L+ + G + ++E+++ G +P++ YN L++ RA P
Sbjct: 280 RSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFP 339
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I+ M G P+ +Y ++ AYGR ED +V+ EMK G+ ++ + L
Sbjct: 340 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLL 399
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L+ + G + +I ++ S +PD++ +SM+ + G+ + E + M
Sbjct: 400 LSAYSKAGDVAKCEDIVNELHES-GLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGP 458
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ ++ LI YG+A + + L + PD
Sbjct: 459 YATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPD 497
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+ +++ +N ++D GR +T Y E+ + P +TYA LL+AY + E +
Sbjct: 145 QSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEA 204
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
++ EM++ G+ S +YN + G A EIF+ MK + CQP + T++ +I +
Sbjct: 205 IFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMK-RDCCQPSTETYTLLINL- 262
Query: 260 SCRGKVSE---AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
GK S+ A +FNEM +PN+ T+L+ + + + +L E G
Sbjct: 263 --HGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHE 320
Query: 317 PD 318
PD
Sbjct: 321 PD 322
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ ++ YG G + V+EEMK +G+ P M ++ LL +A + + I
Sbjct: 357 DRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIV 416
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ ++GL P+ S+L YGR V M+ ++ YN L+ +
Sbjct: 417 NELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRA 476
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN--- 283
G+ ++ +F+ + +++N +PD T++S + S + ++ +F EM++AG P+
Sbjct: 477 GFFEKMEGLFQSL-AAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRT 535
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNR 309
VL S + ++ V+R +++
Sbjct: 536 AKVLLSSCSSEDQIEQVTTVIRTMHK 561
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ F ++++ LYG G F V M++ ++ TYN L++ GRA +++
Sbjct: 424 LEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKME 483
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ + L P+ T+ S L AY R + L ++ EM + G LL+ C
Sbjct: 484 GLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSC 543
Query: 224 ADVGYTDEAFEIFEDM-KSSENCQP 247
+ ++ + M K+ E P
Sbjct: 544 SSEDQIEQVTTVIRTMHKNMETVLP 568
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ D + ++ LI +YG AG F+ +++ + A +KP+++T+ + L R K +
Sbjct: 459 YATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCL 518
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
I++EM D G P+ T LL + E +V R M
Sbjct: 519 EIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQVTTVIRTM 559
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 106/198 (53%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+ + G KP +ITY L+ + R KR + + ++ DNG+ P+ +++ A+
Sbjct: 44 VFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFS 103
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ + ++++MKE G + + + YNTL+ G E+ ++ E M EN +P+
Sbjct: 104 ESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPND 163
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ +I + K+ EA + ++M+ +G +P++ ++ + Y + T+ R + +
Sbjct: 164 RTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILK 223
Query: 310 LPELGITPDDRFCGCLLN 327
+P + P++R CG +++
Sbjct: 224 MPYNIVKPNERTCGIIIS 241
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + +I + +G D + ++++MK G KP TYN L+ G A RP++ +
Sbjct: 91 DSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLL 150
Query: 167 KEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M D + PN TY L++A+ + E+ +V +M G+Q V YNT+ A
Sbjct: 151 EMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQ 210
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G T+ A + M + +P+ T +I+ G + EA M E G +PN
Sbjct: 211 NGETERAERLILKMPYN-IVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPV 269
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V SLI+ Y T+ V AL + E GI PD
Sbjct: 270 VFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPD 302
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 107/229 (46%), Gaps = 7/229 (3%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K + ++E + + ++ LI+ + T + NV +M A G++P+++TYN +
Sbjct: 148 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 207
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ + + + +M N + PN T ++ Y + + L MKE G+ +
Sbjct: 208 YAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPN 267
Query: 213 VTLYNTLLAM---CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
++N+L+ D DEA + E+ +PD TFS+++ S G + E
Sbjct: 268 PVVFNSLIKGYLDTTDTNGVDEALTLMEEF----GIKPDVVTFSTIMNAWSSAGLMENCE 323
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+FN+M++AG EP++ + L + Y +A + L + + G+ P+
Sbjct: 324 EIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPN 372
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 81 NPKSPRASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGV 139
N ++ RA +L K Y+ NE+ +I Y GN L MK +GV
Sbjct: 211 NGETERAERLILKMPYNIVKPNER------TCGIIISGYCKEGNMPEALRFLYRMKELGV 264
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
PN + +N+L+ V M + G+ P+ T+++++ A+ A E+
Sbjct: 265 DPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEE 324
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
++ +M + G++ + Y+ L G +A + M S QP+ F+++I+
Sbjct: 325 IFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSM-SKYGVQPNVVIFTTIISGW 383
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GK+ A + +M E G PNL +LI YG+A++ L + E G+ P+
Sbjct: 384 CAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPE 442
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 7/213 (3%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R ++ +DPN F++LIK Y + +G M+ G+KP+++T++ +++ A
Sbjct: 258 RMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAG 317
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ I+ +M G+ P+ + Y+ L + Y RA ++ M + G+Q +V ++
Sbjct: 318 LMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFT 377
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
T+++ G D AF + E M P+ T+ ++I + +AE + M E
Sbjct: 378 TIISGWCAAGKMDRAFRLCEKMHEM-GTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEE 436
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
G P + S +Q A R + + NR+
Sbjct: 437 RGVVPEM----STMQLVADAWRAIGLFKEANRI 465
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
++ + +CQ M T+ +GK EA+A+FN + E G +P L T+L+ + +
Sbjct: 13 LRGNNSCQTVHARTKLMNTLIG-KGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQK 71
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
R + L+++ + G+ PD ++N +++ K
Sbjct: 72 RFKSIPALLSKVADNGMKPDSILLNAMINAFSESGK 107
>gi|255661172|gb|ACU25755.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 426
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERSGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALVLN 398
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y ++ R L+ L P D
Sbjct: 289 QVLYQTMIVAYERSGLVAHAKRLLHELKRPDNIPRD 324
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K S +R + ++ D A++ +I ++G A F ++ EM+ GV PN +Y+ LL
Sbjct: 62 KAISIFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLL 121
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
K+ + +++ EM + + T ++ YG+ ++ ++ M++ G++
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+V YNTLL + D EA +F M+ +N + + T++SM+ I + +A
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKANN 240
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EM G EPN +++I +GK + D +L G+ D
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRSR-FTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN +S L+ Y G ++ V+EEM G++P+++ Y L+D++ R + +
Sbjct: 160 IEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAA 219
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ MT+ GL PN TY L+ + + + L + + M EKG+Q V YNTL+
Sbjct: 220 RVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGL 279
Query: 224 ADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ V DEA + E+M E +PD TF+S+I G + +A + M E G
Sbjct: 280 SSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRC 339
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
NL LI + + + ++ + G+ PD L+N
Sbjct: 340 NLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILIN 384
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + TLI+ A + D + + EM G++PN++ Y+ LL + R V
Sbjct: 126 RPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGK 185
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC 223
+++EM+ G+ P+ Y +L+ + R + V M E+G++ +V YN L+ +MC
Sbjct: 186 VFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMC 245
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML--EAGFE 281
+ G EA ++ ++M S + QPD T++++IT S ++ EA A+ EM+ E
Sbjct: 246 KE-GSVREALDLRKNM-SEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVR 303
Query: 282 PNLFVLTSLIQ 292
P+L S+I
Sbjct: 304 PDLMTFNSVIH 314
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMK---AIGVKPNMITYNNLLDTMGRAKRPWQVK 163
D +++T++ G D L + M + +PN I+Y L+ + +R Q
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ + M D G+ P+ TY +L+R A + + + EM E G++ +V +Y+ LL
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + ++FE+M S +PD ++++I GKV +A + + M E G EPN
Sbjct: 175 CKTGRWESVGKVFEEM-SGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI K + + + E G+ PD
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPD 268
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 4/217 (1%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+ R D F+++I G L V M G + N++ +N L+ + R + +
Sbjct: 301 RVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKA 360
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-A 221
+ EM +GL P+ TY+ L+ + + R E S EM+ +GM+ Y LL A
Sbjct: 361 MELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKA 420
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
MC D G +A ++F +M NC+ D+ +S+MI G+ AE +M++ G
Sbjct: 421 MC-DQGMMGQARDLFNEM--DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLI 477
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+ + I + K+ R L ++ G PD
Sbjct: 478 PDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPD 514
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ + + + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGSGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYSNVVEVFDKMRGLGYFPDSNVTALVLN 398
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L V+ EM+ I ++ T N ++D G+ + +
Sbjct: 112 PNTVSYSTLLTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 171
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 231
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I S GK+ A +F ++ +G E +
Sbjct: 232 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQV 290
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G SP+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALTVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN +Y++LL Y + + L+V+ EM+E L +T N ++ + +
Sbjct: 103 SEMRTAGVMPNTVSYSTLLTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F M+ +P+ ++++++ + EA +F M E N+
Sbjct: 163 GMAKEADKLFWGMRKM-GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 221
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
S++ YGK + + + GI P+ ++++ ++ K
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWSKIGK 269
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + L+ ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D F+TL+ Y G + ++ ++MK G++P++++Y ++D +AK + K
Sbjct: 533 FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAK 592
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
E+ D GL PN Y +L+ YGR + MK G+Q + Y +L+
Sbjct: 593 EYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWM 652
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +EA IF + + N ++ MI GK+ EA A F EM G PN
Sbjct: 653 CHAGLVEEAKTIFSQAREN-NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 711
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
T+L+ Y K+ +++ + + + G+ PD+ G L+
Sbjct: 712 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 152/335 (45%), Gaps = 20/335 (5%)
Query: 86 RASKL--KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RA +L + +D + ++ +++ +IK AG D + E+ G++P +
Sbjct: 197 RAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTV 256
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA-RYGEDTLSVYR 202
+TYN L+D + ++ R + + M G++P+ T+ L+ R R+GE + V +
Sbjct: 257 VTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGI-VLQ 315
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
EM++ G+ + +YN L+ G+ +A +F++M + +P + T++ +
Sbjct: 316 EMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM-VLKKMKPTAVTYNLIAKALCKE 374
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ-CYGKAQRTDDVVRALNRLPELGITPDDRF 321
G++ AE + +ML G + + +++ + +R + VV N + G+ P+D
Sbjct: 375 GEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPL 434
Query: 322 CGCLLNVMTQTPK--EELGKLVECVEKSNSKLGYVVKLLLEEQDI----EGDFKKEATEL 375
+ + + K E +G + + K G V L I EG + KEAT++
Sbjct: 435 MTACMRELCKGGKHQEAVGIWFKTLNK-----GLGVNLATSNALIHGLCEGKYMKEATKV 489
Query: 376 FNSI---SKDVKKAYCNCLIDLCVNLNLLENACKL 407
++ ++ N +I C + +E A KL
Sbjct: 490 IQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKL 524
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 6/222 (2%)
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K +GV N+ T N L+ + K + + + M + G+ + TY ++R +
Sbjct: 461 KGLGV--NLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 518
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
E+ + ++ +M +G + + +NTLL ++G +E F + + MK +E QPD ++ +
Sbjct: 519 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMK-TEGLQPDIVSYGT 577
Query: 255 MITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I C+ K + +A+ E+++ G +PN+F+ +LI YG+ + A+ +
Sbjct: 578 IID-GHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSN 636
Query: 314 GITPDDRFCGCLLNVMTQTP-KEELGKLVECVEKSNSKLGYV 354
GI P + G L+ M EE + ++N LG +
Sbjct: 637 GIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVI 678
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 1/228 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ E + D ++ T+I + A + E+ G+KPN+ YN L+ GR
Sbjct: 564 KTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDI 623
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ M NG+ P TY SL+ A E+ +++ + +E + L V Y +
Sbjct: 624 SGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIM 683
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ +G EA FE+M+ S P+ T+++++ S G EA +F+EM+ +G
Sbjct: 684 IQGYCKLGKMVEAVAYFEEMR-SRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 742
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
P+ +LI + D + L +T DDR L N
Sbjct: 743 VIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSN 790
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K K Y T + + + ++ LI YG G+ G ++ E MK+ G++P +TY +L+
Sbjct: 590 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 649
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
M A + KTI+ + +N + Y +++ Y + + ++ + EM+ +G+
Sbjct: 650 YWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGIS 709
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ Y TL+ + G ++EA ++F++M S PD+ T+ ++I CS
Sbjct: 710 PNKLTYTTLMYAYSKSGNSEEASKLFDEMVGS-GVIPDNITYGTLIARCS 758
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+R + +G S+ N L G D A E+F++M+ S N + +++++MI
Sbjct: 173 FRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALC 232
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
GKV M E+ AG +P + L+ K+ R ++ R R+ + G+TP
Sbjct: 233 KAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVV 292
Query: 321 FCGCLLNVMTQTPK-EELGKLVECVEK 346
G L+N + + + E+G +++ +E+
Sbjct: 293 TFGILINGLARGERFGEVGIVLQEMEQ 319
>gi|255661160|gb|ACU25749.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 426
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG P+ +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPESNVIALVLN 398
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ +A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|224138872|ref|XP_002326711.1| predicted protein [Populus trichocarpa]
gi|222834033|gb|EEE72510.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 98.2 bits (243), Expect = 9e-18, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Query: 295 GKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGY 353
G+ + + +V+ N + G+ DDRFCGCLL+V + + + E++ K++ C++++N KL
Sbjct: 11 GRLEESLTLVKVFNVAIDGGVKLDDRFCGCLLSVASLSDESEDVAKVLACLQQANPKLVA 70
Query: 354 VVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLT 413
+VKL +E+ K+E + + + + ++ +C CLID+C +L A +LL LG+
Sbjct: 71 LVKLFEDEETSFETLKEEFRAVVSDAAIETRRPFCKCLIDICRKRDLHGRAHELLYLGIL 130
Query: 414 LEVYTDIQSRSPTQWSLHLKSLSLGAA 440
+Y D+ ++ +WSL+++SLS+GAA
Sbjct: 131 HGLYPDLHHKTVKEWSLNVRSLSVGAA 157
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 116/225 (51%), Gaps = 6/225 (2%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+ + R ++ R P+ ++ LI LYG A L V+ EM++ KPN+ T+ L
Sbjct: 185 QKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTAL 244
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + + I++++ + GL P+ Y +L+ AY RA + ++ M+ G
Sbjct: 245 VNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 304
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ YN ++ G ++A +FE MK P + +++ S GKV++ E
Sbjct: 305 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRL-GITPTMKSHMLLLSAYSRAGKVAKCE 363
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKA---QRTDDVVRALNRLP 311
+ N+M ++G +P+ FVL S++ YG+ ++ ++V+ A+ + P
Sbjct: 364 EIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP 408
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
S L EK+ A K+ P+A ++ I G+ + ++E MK +P+ T
Sbjct: 146 SGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTAT 205
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L++ G+A + + ++ EM PN T+ +L+ A+ R E ++ +++
Sbjct: 206 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 265
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
E G++ V YN L+ + G+ A EIF M+ C+PD +++ M+ G
Sbjct: 266 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLH 324
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+A+A+F M G P + L+ Y +A + +N++ + GI PD +
Sbjct: 325 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSM 384
Query: 326 LNVMTQTPK-EELGKLVECVEKS 347
LN+ + + E++ +++ +EK
Sbjct: 385 LNLYGRLGQFEKMEEVLTAMEKG 407
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L+K Y T+G + V+ EM+ G P+ + YN +D + + + I++
Sbjct: 134 DTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFER 193
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + P+ TY L+ YG+A L V+ EM+ + + ++ + L+ A G
Sbjct: 194 MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGL 253
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A EIFE ++ + +PD + +++++ S G A +F+ M G EP+
Sbjct: 254 CEKAEEIFEQLQEA-GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYN 312
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
++ YG+A +D + LGITP + LL+ ++ GK+ +C E N
Sbjct: 313 IMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA-----GKVAKCEEIVN 367
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 7/222 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R++K + + F+ L+ + G + ++E+++ G++P++ YN L++ RA P
Sbjct: 230 RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFP 289
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I+ M G P+ +Y ++ AYGRA ED +V+ MK G+ ++ + L
Sbjct: 290 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLL 349
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L+ + G + EI M S +PD++ +SM+ + G+ + E + M +
Sbjct: 350 LSAYSRAGKVAKCEEIVNQMHKS-GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP 408
Query: 280 FEPNLFVLTSLIQCYGKA---QRTDDVVRALNRLPELGITPD 318
+ ++ LI YG+A R +++ R+ LP + PD
Sbjct: 409 YPADISTYNILINIYGRAGFFARMEELFRS---LPARNLIPD 447
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++I YN L+D G+ + ++ Y E+ + P +TYA LL+AY + E +V
Sbjct: 96 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 155
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ EM++ G S +YN + G T +A EIFE MK + CQP + T++ +I +
Sbjct: 156 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK-RDRCQPSTATYTMLINLYG 214
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
K A +F+EM +PN+ T+L+ + + + +L E G+ PD
Sbjct: 215 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 272
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ ++ YG AG + V+E MK +G+ P M ++ LL RA + + + I
Sbjct: 307 DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIV 366
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +G+ P+ S+L YGR E V M++ ++ YN L+ +
Sbjct: 367 NQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRA 426
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G+ E+F + + N PD T++S I S R + + +F EM++AG P+
Sbjct: 427 GFFARMEELFRSLP-ARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPD 482
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 116/226 (51%), Gaps = 1/226 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D + Y EM + P+++TY++++ + + + + +
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ PN TY S+L Y + ++ + ++M+ G++ V YN+L+
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + EA +IF+ M + +PD T+ +++ + +G + E A+ + M+ G P+ V
Sbjct: 315 GRSTEARKIFDSM-TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI Y K ++ D+ + +++ + G+ P+ G ++ ++ ++
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKS 419
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ ++M++ GV+P+++TYN+L+D + + R + + I+ MT GL P+ TY +LL+
Sbjct: 286 IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQG 345
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + ++ M G+ ++N L+ A DEA +F M+ P
Sbjct: 346 YATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQ-HGLNP 404
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
+ T+ ++I I G V +A F +M++ G PN+ V TSLI
Sbjct: 405 NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 449
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK +D R + PN +STLI Y AG D + M ++G+KP+ +TYN L
Sbjct: 496 EKLFDLMVR---IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R R ++KEM +G+SPN TY +L+ R +Y + + G
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
QL ++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G+ EA+
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAK 671
Query: 270 AMFNEMLEAGFEPN 283
+F G PN
Sbjct: 672 DLFVAFSSNGLVPN 685
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 36/224 (16%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++ M G++P++ TY LL ++ + M NG+ P+ + + L+ AY
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ + V+ +M++ G+ +V Y ++ + G D+A FE M E P+
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM-IDEGLTPNI 441
Query: 250 WTFSSMI----------------------TIC------------SCR-GKVSEAEAMFNE 274
++S+I IC C+ G+V E+E +F+
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M+ G +PN+ ++LI Y A + D+ + L+ + +G+ PD
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 6/239 (2%)
Query: 108 PNAFSTLIKLYGTAGNFDG-----CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
P+ FS I L G L++ + + G P++++Y +++ + +
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ Y EM D +SP+ TY+S++ A + + + + V M + G+ + YN++L
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
EA + M+S + +PD T++S++ G+ +EA +F+ M + G EP
Sbjct: 276 YCSSEQPKEAIGFLKKMRS-DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
++ +L+Q Y ++ L+ + GI PD L+ + K + LV
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN + +I + +G+ D + +E+M G+ PN+I Y +L+ ++ + + +
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM D G+ N + S++ ++ + ++ ++ M G++ +V Y+TL+
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEP 282
G DEA ++ M S +PD T++++I CR ++ +A A+F EM+ +G P
Sbjct: 522 CLAGKMDEATKLLSSMFSV-GMKPDCVTYNTLIN-GYCRVSRMDDALALFKEMVSSGVSP 579
Query: 283 NLFVLTSLIQCYGKAQRT 300
N+ ++Q +RT
Sbjct: 580 NIITYNIILQGLFHTRRT 597
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 108/248 (43%), Gaps = 2/248 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM G+ N I +N+++ + + R + + ++ M G+ PN TY++L+ Y A
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ + M GM+ YNTL+ V D+A +F++M SS P+ T+
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS-GVSPNIITY 584
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ ++ + + A+ ++ + ++G + L ++ K TD+ +R L
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 644
Query: 313 LGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKL-GYVVKLLLEEQDIEGDFKKE 371
+ + R ++ + + + + K + SN + Y L+ E I +E
Sbjct: 645 TDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704
Query: 372 ATELFNSI 379
+LF S+
Sbjct: 705 LDQLFFSM 712
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 4/267 (1%)
Query: 69 KTGSSPKSYIWVNP-KSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFD 125
+ G P Y + P S + ++ + + +K PN F+ LI G F+
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ +Y +M A G+ P +TYN L++ + R TI+K M +G P+ TY ++
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
+ + + + ++ +M + G +V YNTL+ G + A + E MK +
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN-GL 478
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+PD+WT++ +I+ S GK+ A ++F M+E G PN T++I Y + DD +
Sbjct: 479 KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALA 538
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQT 332
++ E G P + +++ ++T
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKT 565
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 3/214 (1%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DPN+ +STLI + G + +++ EEM G++P + TY L ++ A +
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +M G PN T+ +L+ R E + +Y +M G+ + YN L+
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + AF IF+ M S P + T++ +I G + +A +F++ML+AG PN+
Sbjct: 389 VEGRFETAFTIFKWML-SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI Y K ++ +R L + G+ PD
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TLI Y GN + + + E MK G+KP+ TY L+ R + ++
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M ++G+SPN TY +++ Y +D L+++ +M E G S YN +++ +
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
EA E F + P+ T++S I G+ A +F+EM + + PNL+
Sbjct: 565 TNSISEA-ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623
Query: 286 VLTSLIQCYGKAQRTDD--VVRALNRLPELGITPD 318
+SLI + R +D + L RL G P+
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI---- 165
+F+TL+ G D ++Y +M G++P+++T+N +++ + + R + K I
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 166 -------------------------------YKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+ M +G PN TY++L+
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
E+ + + EM +KG++ +V Y L D G + EA E+ MK C P+ TF++
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK-KRGCVPNIQTFTA 347
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
+I+ S GK A ++++ML G P +LI
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+A ++ LI + G + +++ M G+ PN +TY ++D +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ +M ++G P+ TY ++ + + + + +M ++G+ +V Y + +
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN---EMLEAGF 280
G T AF+IF +M+ N P+ +T+SS+I G+ +AE M+N + G
Sbjct: 598 CRNGRTGLAFKIFHEME-KRNYFPNLYTYSSLIYGLCQEGRAEDAE-MYNLLARLTHYGC 655
Query: 281 EPNLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
EPN+ T+L++ G+ D +V ++ + G+ P + LL
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK---KGLQPSEEIYRALL 701
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
++ EM+ PN+ TY++L+ + GRA+ ++ + +T G PN +TY +L++
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVK 667
Query: 187 AY-GRAR-YGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSE 243
G R Y D L V M++KG+Q S +Y LL C ++ + A IF M +
Sbjct: 668 GLCGEGRCYEADQLVV--SMQKKGLQPSEEIYRALLIGECKNLK-VESALNIFYSM-DTL 723
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
Q + ++I + EA+ +F MLE + + T L+ K TD
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLC 783
Query: 304 VRALNRL 310
++ L+ +
Sbjct: 784 LKLLHVM 790
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
N+ + G +PN+ TY L+ + R ++ + M GL P+ Y +LL
Sbjct: 645 NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE 704
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE-NCQP 247
+ E L+++ M G QL ++ Y L+ + +EA IF+ M N
Sbjct: 705 CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDE 764
Query: 248 DSWT 251
+WT
Sbjct: 765 VAWT 768
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 4/267 (1%)
Query: 69 KTGSSPKSYIWVNP-KSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFD 125
+ G P Y + P S + ++ + + +K PN F+ LI G F+
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ +Y +M A G+ P +TYN L++ + R TI+K M +G P+ TY ++
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
+ + + + ++ +M + G +V YNTL+ G + A + E MK +
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN-GL 478
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+PD+WT++ +I+ S GK+ A ++F M+E G PN T++I Y + DD +
Sbjct: 479 KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALA 538
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQT 332
++ E G P + +++ ++T
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKT 565
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 3/214 (1%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DPN+ +STLI + G + +++ EEM G++P + TY L ++ A +
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +M G PN T+ +L+ R E + +Y +M G+ + YN L+
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + AF IF+ M S P + T++ +I G + +A +F++ML+AG PN+
Sbjct: 389 VEGRFETAFTIFKWML-SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI Y K ++ +R L + G+ PD
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TLI Y GN + + + E MK G+KP+ TY L+ R + ++
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M ++G+SPN TY +++ Y +D L+++ +M E G S YN +++ +
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
EA E F + P+ T++S I G+ A +F+EM + + PNL+
Sbjct: 565 TNSISEA-ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623
Query: 286 VLTSLIQCYGKAQRTDD--VVRALNRLPELGITPD 318
+SLI + R +D + L RL G P+
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI---- 165
+F+TL+ G D ++Y +M G++P+++T+N +++ + + R + K I
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 166 -------------------------------YKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+ M +G PN TY++L+
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
E+ + + EM +KG++ +V Y L D G + EA E+ MK C P+ TF++
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK-KRGCVPNIQTFTA 347
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
+I+ S GK A ++++ML G P +LI
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+A ++ LI + G + +++ M G+ PN +TY ++D +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ +M ++G P+ TY ++ + + + + +M ++G+ +V Y + +
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN---EMLEAGF 280
G T AF+IF +M+ N P+ +T+SS+I G+ +AE M+N + G
Sbjct: 598 CRNGRTGLAFKIFHEME-KRNYFPNLYTYSSLIYGLCQEGRAEDAE-MYNLLARLTHYGC 655
Query: 281 EPNLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
EPN+ T+L++ G+ D +V ++ + G+ P + LL
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK---KGLQPSEEIYRALL 701
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 11/187 (5%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
++ EM+ PN+ TY++L+ + GRA+ ++ + +T G PN +TY +L++
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVK 667
Query: 187 AY-GRAR-YGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSE 243
G R Y D L V M++KG+Q S +Y LL C ++ + A IF M +
Sbjct: 668 GLCGEGRCYEADQLVV--SMQKKGLQPSEEIYRALLIGECKNLK-VESALNIFYSM-DTL 723
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
Q + ++I + EA+ +F MLE + + V T L+ K TD
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLC 783
Query: 304 VRALNRL 310
++ L+ +
Sbjct: 784 LKLLHVM 790
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
N+ + G +PN+ TY L+ + R ++ + M GL P+ Y +LL
Sbjct: 645 NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGE 704
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
+ E L+++ M G QL ++ Y L+ + +EA IF+ M
Sbjct: 705 CKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTM 755
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 2/228 (0%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
K +D R E D +++TL+ Y G L V+ EM G+ P+++T+ +L+
Sbjct: 243 RKVFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+A Q + +M + GL N T+ +L+ + + + +D L EM++ G+Q
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
SV YN L+ +G D A E+ +M+ ++ +PD T+S++I+ G + A +
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREME-AKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ML+ G P+ +SLI+ + +R +D + +LG+ PD+
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R R++ F+ LI + G D L EEM+ G++P+++ YN L++ + R
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +EM + P+ TY++++ Y + + + ++M +KG+ Y++L
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + ++A E+FE+M QPD +T++++I G V +A ++ +EM+ G
Sbjct: 440 IRGLCEEKRLNDACELFENMLQL-GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ + LI K+ RT + R L +L PD+
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 538
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY-GRARYGED 196
G P++ YN +L + A P + M +G++PN TY L+RA R R E+
Sbjct: 113 GYAPSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRL-EE 170
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ V +M+ G + YNTL+A G D A + M+ N +P+ TF+SM+
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G++ A +F+EM+ G P++ +L+ Y K + + + + + G+
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 317 PD 318
PD
Sbjct: 291 PD 292
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E R+ P+ +ST+I Y GN D + ++M GV P+ ITY++L+ + KR
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+++ M G+ P+ TY +L+ + + E LS++ EM KG+ V Y+ L
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGK 264
+ + T EA + + E+ PD+ + +++ CS +G
Sbjct: 510 INGLSKSARTKEAHRLLFKL-YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 568
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EA+ ++ ML+ ++ + V + LI + + + ++ G +P+
Sbjct: 569 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
++++ ++ ++ L+ L G D +Y EM V ++ T+N +++ +
Sbjct: 148 SKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGF 207
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ K +M GLSP++ T S + Y R++ + V+ EM + ++S YN
Sbjct: 208 VKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN-EVS---YNQ 263
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ + G DEA +F MK + C P+ +T++++I CR V +A + +EMLE
Sbjct: 264 LIHGLCEAGRIDEAVSLFVRMKD-DCCYPNVYTYTALIK-GLCRKNVHKAMGLLDEMLER 321
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
P+L SLI +A D R L+ + E G+ PD R GC ++ + ++ + E
Sbjct: 322 NLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVE 379
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 2/214 (0%)
Query: 108 PNAFSTLIKLYGTA-GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
PN ++ + G N + + +EM + P++ITYN+L+ RA +
Sbjct: 291 PNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLL 350
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M + GL P+ TY + ++ E+ ++ + E+G+ +V +Y+ L+ V
Sbjct: 351 SLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKV 410
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA +FE M S+NC P+++TF+++I G + EA ++F++M++ G +P ++
Sbjct: 411 GKVDEAGCLFEKML-SKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYT 469
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
LI K DD + L ++ G P R
Sbjct: 470 FNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVAR 503
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + I + + +++ + GV N+I Y+ L+D + + + ++
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLF 420
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M SPN T+ +L+ A ++ LS++ +M + G++ +V +N L+
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A + + M SS +P + T+++ I + GKV EAE M +M E G P+ F
Sbjct: 481 GDFDDAHKCLQKMMSSGE-KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFT 539
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
TSLI+ YGK T L + + P
Sbjct: 540 YTSLIKAYGKLGLTYSAFDVLKSMFDADCEP 570
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 35/309 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ LI G+FD ++M + G KP TYN ++ A + + + + +M
Sbjct: 470 FNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMK 529
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT- 229
+ G+ P+ TY SL++AYG+ V + M + + S + +L+ D Y
Sbjct: 530 EEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVV 589
Query: 230 ----------------------------DEAFEIFEDMKSSENCQPDSWTFSSMIT-ICS 260
D E+FE+M+ C PDS + +I+ IC
Sbjct: 590 EKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEK-HGCTPDSKCYEKLISGICK 648
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ A + ++M + G P+ V ++I C K Q+ + + + G +P
Sbjct: 649 VEN-LGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLE 707
Query: 321 FCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSIS 380
C L+ + + + E G V K GY + + I+G K+ E F+ +
Sbjct: 708 HCKTLICGLYEEGETERGN---SVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLF 764
Query: 381 KDVKKAYCN 389
++++K CN
Sbjct: 765 EEMEKNGCN 773
>gi|255661214|gb|ACU25776.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 426
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 117/236 (49%), Gaps = 7/236 (2%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ + N++TYN ++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K N D + I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPNNIPRD-----TAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
++ V +I + K ++ +VV ++ LG PD +LN + K E
Sbjct: 352 VKDITVFERMISLFSKYKKYTNVVEVFEKMRGLGYFPDSNVIAVVLNAYGKLHKFE 407
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FDG L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ +G++P+ Y S++ +G+AR + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + EA+ +F M + G EPN+
Sbjct: 128 KRFREALSVFAEMREIK-CLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 112 PNTVSYSTLLTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKL 171
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K + +V YNT++ +
Sbjct: 172 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGK 231
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 232 TLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQV 290
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 291 LYQTMIVAYERAGLVAHAKRLLHELKRPNNIPRD 324
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ ++K G+ P+++ YN++++ G+A+ + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRVAGVMPNTVSYSTLLTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ + Q + T
Sbjct: 163 DMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQ-NVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++M+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
GI D
Sbjct: 282 VSGIEID 288
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 DRALSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD ++SMI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSKLKRS-GITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + +R + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T I + AG + V+ + G ++ + ++ + K+ V ++++M
Sbjct: 325 TAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMISLFSKYKKYTNVVEVFEKMRGL 384
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
G P+ N A +L AYG+ E+ VY EM+++G
Sbjct: 385 GYFPDSNVIAVVLNAYGKLHKFENANGVYMEMQDEG 420
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 242
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMI 302
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 303 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 357
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +V+ +++ LG PD +LN
Sbjct: 358 VKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLN 404
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 118 PNTTSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 237
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 238 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQI 296
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 330
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 14 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKXCDYSKAISIF 73
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 74 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXEN 133
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 134 KKFLEALSVFSEMREIK-CXLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 192
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 193 YNTLLRVYGDAE 204
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 49 DLVLYSNLIELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 108
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 109 SEMKTAGVMPNTTSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQL 168
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 169 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 227
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 228 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLR 287
Query: 312 ELGITPD 318
G+ D
Sbjct: 288 SSGVEID 294
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 61
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 62 KXCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 TSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQ 167
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
++ EM+++ + Y+TL+ G D A + M+ + D +S++I +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQ-VPGDLVLYSNLIELS 60
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
S+A ++F+ + +GF P+L ++I +GKA+ + ++ + G+ P+
Sbjct: 61 RKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 320 RFCGCLLNVMTQTPK 334
LL + + K
Sbjct: 121 TSYSTLLTMYXENKK 135
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 312 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 371
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E G
Sbjct: 372 SKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 426
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E+ + ++S+ K G + + L VY +K +K ++ N++L + + R
Sbjct: 108 EREMTNAASYSSYFKYLGLSRDPARALQVYGAIKDQTMKVHVSVCNSVLGCLVKNGRLDS 167
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTLL 220
+Y EM GLSP+ TY++LL + + G + + +MK +G+Q+ + +Y TLL
Sbjct: 168 SFKLYDEMIREGLSPDPFTYSTLLSGCMKLKQGYTKAMELINDMKSRGLQMDIVIYGTLL 227
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
A+CA Y +EA F+ MK +C P+ + +SS++ S +AE + ++ +G
Sbjct: 228 AICASHNYCEEAEVYFQKMKDEGHC-PNLFHYSSLLNAYSENSDYEKAELLMKDLRSSGL 286
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
PN +LT+L++ Y K + L L G D+ L++ + + K + K+
Sbjct: 287 TPNKVILTTLLKVYSKGGLFEKAKELLTELEASGFAQDEMPYCILIDGLVKGGKIQEAKI 346
Query: 341 V--ECVEKSNSKLGYVVKLLL 359
+ E EK GY +++
Sbjct: 347 LFNEMKEKGVKSDGYAFSIMI 367
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 6/271 (2%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ +++ G +D V+E M+ + N +Y++ +G ++ P + +Y + D
Sbjct: 84 NIILRHCGDTRRWDDLSKVFEWMQEREM-TNAASYSSYFKYLGLSRDPARALQVYGAIKD 142
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV--GYT 229
+ + + S+L + + + +Y EM +G+ Y+TLL+ C + GYT
Sbjct: 143 QTMKVHVSVCNSVLGCLVKNGRLDSSFKLYDEMIREGLSPDPFTYSTLLSGCMKLKQGYT 202
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A E+ DMKS Q D + +++ IC+ EAE F +M + G PNLF +S
Sbjct: 203 -KAMELINDMKS-RGLQMDIVIYGTLLAICASHNYCEEAEVYFQKMKDEGHCPNLFHYSS 260
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVECVEKSN 348
L+ Y + + + L G+TP+ LL V ++ E K L+ +E S
Sbjct: 261 LLNAYSENSDYEKAELLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKAKELLTELEASG 320
Query: 349 SKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
+ +L + ++G +EA LFN +
Sbjct: 321 FAQDEMPYCILIDGLVKGGKIQEAKILFNEM 351
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 146/352 (41%), Gaps = 42/352 (11%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIK-LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
K YD R E DP +STL+ + + + +MK+ G++ +++ Y LL
Sbjct: 170 KLYDEMIR-EGLSPDPFTYSTLLSGCMKLKQGYTKAMELINDMKSRGLQMDIVIYGTLLA 228
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + +++M D G PN Y+SLL AY E + ++++ G+
Sbjct: 229 ICASHNYCEEAEVYFQKMKDEGHCPNLFHYSSLLNAYSENSDYEKAELLMKDLRSSGLTP 288
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ + TLL + + G ++A E+ ++++S Q D + +I GK+ EA+ +
Sbjct: 289 NKVILTTLLKVYSKGGLFEKAKELLTELEASGFAQ-DEMPYCILIDGLVKGGKIQEAKIL 347
Query: 272 FNEMLEAG------------------------------FEP-----NLFVLTSLIQCYGK 296
FNEM E G FE +L +L + ++ Y
Sbjct: 348 FNEMKEKGVKSDGYAFSIMISALHRGGHHEESKQLAKEFESENASYDLVMLNTSLRTYCS 407
Query: 297 AQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLVECVEKSNSKLGYVV 355
+ V+R L ++ EL I+PD+ L+ + L K VE + +L +
Sbjct: 408 TNDMESVMRMLKKMDELNISPDNITFNTLIRYFCNSKVYHLAYKTVEDMHTKGHQLNEEL 467
Query: 356 KLLLEEQDIEGDFKKEATELFNSI---SKDVKKAYCNCLIDLCVNLNLLENA 404
+ Q +G F EA L+N + + V K+ + + V LL+ A
Sbjct: 468 CSHVMVQLGKGGFPSEAFSLYNMLRYSKRTVHKSLHEKALGILVAAELLKEA 519
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 84/203 (41%), Gaps = 1/203 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D AFS +I G+ + + +E ++ +++ N L T V +
Sbjct: 359 DGYAFSIMISALHRGGHHEESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRML 418
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K+M + +SP+ T+ +L+R + ++ +M KG QL+ L + ++
Sbjct: 419 KKMDELNISPDNITFNTLIRYFCNSKVYHLAYKTVEDMHTKGHQLNEELCSHVMVQLGKG 478
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ EAF ++ ++ S+ S ++ + + + EA + + + +L
Sbjct: 479 GFPSEAFSLYNMLRYSKRTVHKSLHEKALGILVAAE-LLKEAYIVVKDNADLISPASLEK 537
Query: 287 LTSLIQCYGKAQRTDDVVRALNR 309
G +DV++ALNR
Sbjct: 538 FAKSFMVSGNINLINDVMKALNR 560
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
GV+PN TYN +++ +A I ++ G P+ TY+SL+
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++V+ E EKG + S+ LYNTL+ + G +A ++ +DM C PD WT++ ++
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM-MEHGCSPDIWTYNLVVN 434
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G +S+A + N+ + G P++F +LI Y K + D + L+ + GITP
Sbjct: 435 GLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITP 494
Query: 318 DDRFCGCLLNVMTQTPK 334
D LLN + + K
Sbjct: 495 DVITYNTLLNGLCKARK 511
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI Y N D + + + M + G+ P++ITYN LL+ + +A++ V +
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTF 519
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + G +PN TY L+ ++ + R + + +++EMK +G+ + TL+
Sbjct: 520 KAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSN 579
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A+E+F ++ + F+ MI + VS AE +F++M + P+ +
Sbjct: 580 GELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYT 639
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+I Y K D L G+ P CG +LN + T +
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N ++ + +++ YG G +NV+E M +P++ +YN +++ +
Sbjct: 68 KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYF 127
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q +Y M D G+ P+ T+ ++++ L + M +G + + Y +
Sbjct: 128 SQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAV 187
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++ EA+ +F++M C PD TF+ +I + +G V E+E +F+++++ G
Sbjct: 188 ISGFYKENCQIEAYHLFDEMLKQGIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PNLF IQ + D+ R L + G+TPD
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPD 285
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S+LI G+ + + V+ E G K ++I YN L+ + + Q +
Sbjct: 355 DEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM 414
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K+M ++G SP+ TY ++ + D + + KG + +NTL+
Sbjct: 415 KDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQ 474
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D+A EI + M S PD T+++++ +C R K+ F MLE G PN+
Sbjct: 475 RNMDKAIEILDTM-LSHGITPDVITYNTLLNGLCKAR-KLDNVVDTFKAMLEKGCTPNII 532
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI+ + K ++ + + + G+TPD
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ A D ++ ++ M G PN+ITYN L+++ + ++ + ++
Sbjct: 495 DVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLL-AMCA 224
KEM GL+P+ T +L+ + ++ + KE S ++N ++ A C
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCX 614
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ + A ++F M S+ C PD++T+ MI G + A E + G P+
Sbjct: 615 KLNVS-MAEKLFHKMGGSD-CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSF 672
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++ C R + V +N + + GI P++
Sbjct: 673 TTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 109/245 (44%), Gaps = 4/245 (1%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEM 134
YI + R K++E + + R + + +P+ +++ ++ + G F VY M
Sbjct: 79 YIGIMRDYGRKGKVQE-AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K IG+ P++ T+ + + RP + M G N +Y +++ + +
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ ++ EM ++G+ + +N L+ + G E+ ++F + C P+ +TF+
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVC-PNLFTFNI 256
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
I +G + EA + ++ G P++ +LI + K + + L+++ G
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316
Query: 315 ITPDD 319
+ P++
Sbjct: 317 VEPNE 321
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 126 GCLN----VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
GCL+ + + A G P++ T+N L+D + + + I M +G++P+ TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMK 240
+LL +AR ++ + ++ M EKG ++ YN L+ + C D + EA E+F++MK
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS-EAMELFKEMK 558
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ PD T ++I G++ +A +F
Sbjct: 559 -TRGLTPDIVTLCTLICGLCSNGELDKAYELF 589
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW-NTYASLLRAYGRARYGED 196
G K + TY +++ +G + ++ + EM N S Y ++R YGR ++
Sbjct: 35 GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQE 94
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++V+ M + SV YN ++ + + GY +A +++ MK PD +T + +
Sbjct: 95 AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI-GIYPDVYTHTIRM 153
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G+ + A + N M G E N ++I + K + + + + GI
Sbjct: 154 KSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGIC 213
Query: 317 PD 318
PD
Sbjct: 214 PD 215
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 116/226 (51%), Gaps = 1/226 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D + Y EM + P+++TY++++ + + + + +
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ PN TY S+L Y + ++ + ++M+ G++ V YN+L+
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + EA +IF+ M + +PD T+ +++ + +G + E A+ + M+ G P+ V
Sbjct: 315 GRSTEARKIFDSM-TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI Y K ++ D+ + +++ + G+ P+ G ++ ++ ++
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKS 419
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
++M++ GV+P+++TYN+L+D + + R + + I+ MT GL P+ TY +LL+ Y
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ ++ M G+ ++N L+ A DEA +F M+ P+ T
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQ-HGLNPNVVT 408
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
+ ++I I G V +A F +M++ G PN+ V TSLI
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 449
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK +D R + PN +STLI Y AG D + M ++G+KP+ +TYN L
Sbjct: 496 EKLFDLMVR---IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R R ++KEM +G+SPN TY +L+ R +Y + + G
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
QL ++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G+ EA+
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAK 671
Query: 270 AMFNEMLEAGFEPNL 284
+F + G P++
Sbjct: 672 DLFAALSANGLVPDV 686
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 36/224 (16%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++ M G++P++ TY LL ++ + M NG+ P+ + + L+ AY
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ + V+ +M++ G+ +V Y ++ + G D+A FE M E P+
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM-IDEGLTPNI 441
Query: 250 WTFSSMI----------------------TIC------------SCR-GKVSEAEAMFNE 274
++S+I IC C+ G+V E+E +F+
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M+ G +PN+ ++LI Y A + D+ + L+ + +G+ PD
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 6/239 (2%)
Query: 108 PNAFSTLIKLYGTAGNFDG-----CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
P+ FS I L G L++ + + G P++++Y +++ + +
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ Y EM D +SP+ TY+S++ A + + + + V M + G+ + YN++L
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
EA + M+S + +PD T++S++ G+ +EA +F+ M + G EP
Sbjct: 276 YCSSEQPKEAIGFLKKMRS-DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
++ +L+Q Y ++ L+ + GI PD L+ + K + LV
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 101/198 (51%), Gaps = 5/198 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN + +I + +G+ D + +E+M G+ PN+I Y +L+ ++ + + +
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM D G+ N + S++ ++ + ++ ++ M G++ +V Y+TL+
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGY 521
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEP 282
G DEA ++ M S +PD T++++I CR ++ +A A+F EM+ +G P
Sbjct: 522 CLAGKMDEATKLLSSMFSV-GMKPDCVTYNTLIN-GYCRVSRMDDALALFKEMVSSGVSP 579
Query: 283 NLFVLTSLIQCYGKAQRT 300
N+ ++Q +RT
Sbjct: 580 NIITYNIILQGLFHTRRT 597
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 3/211 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+++I + G +++ M IGVKPN+ITY+ L+D A + + + M
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ TY +L+ Y R +D L++++EM G+ ++ YN +L T
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS-EAEAMFNEMLEAGFEPNLFVLTS 289
A E++ + S Q + T+ ++I C+ ++ EA MF + +
Sbjct: 599 AAKELYVGITKS-GTQLELSTY-NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 656
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+I K R D+ L G+ PD R
Sbjct: 657 MIGALLKVGRNDEAKDLFAALSANGLVPDVR 687
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM G+ N I +N+++ + + R + + ++ M G+ PN TY++L+ Y A
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ + M GM+ YNTL+ V D+A +F++M SS P+ T+
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS-GVSPNIITY 584
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ ++ + + A+ ++ + ++G + L ++ K TD+ +R L
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 97/255 (38%), Gaps = 44/255 (17%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG---LSPNWNTYASLL 185
+V+EE+ G ++ N L + R P + Y M G ++P +TY L+
Sbjct: 36 HVFEELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYGILI 94
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTD-------------- 230
RA + + + +KG ++ + LL +CAD +D
Sbjct: 95 GCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSC 154
Query: 231 ---------------------EAFEIFEDMKSSE--NCQPDSWTFSSMITICSCRGKVSE 267
EA E+ M PD +++++I G +
Sbjct: 155 MPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDK 214
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
A + ++EML+ P++ +S+I K Q D + L + + G+ P+ +L+
Sbjct: 215 AYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274
Query: 328 --VMTQTPKEELGKL 340
++ PKE +G L
Sbjct: 275 GYCSSEQPKEAIGFL 289
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ I I + G+ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDIAIHILAGAGRXEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV +++ LG PD +LN
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLN 398
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|255661200|gb|ACU25769.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 426
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 125/248 (50%), Gaps = 16/248 (6%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN ++ G+
Sbjct: 177 KXGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ P+ TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
++ V +I + K ++ +VV ++ LG PD +LN GKL
Sbjct: 352 VKDITVFERMINLFSKYKKYSNVVEVFEKMRGLGYFPDSNVIALVLNA--------YGKL 403
Query: 341 VECVEKSN 348
E EK+N
Sbjct: 404 RE-FEKAN 410
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y F L+V+ EM+ I N+IT N ++D G+ + ++
Sbjct: 113 DTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 173 WGMRKXGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M + +PD+ T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 233 LEHEKANNLIQEM-HNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L +F ++++ +K G+ P+++ YN++++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDFSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ P+ +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMRMAGIMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 DMAKEADKLFWGMRKXGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++M+ I + +A + EM G EP+ +++I +GK + D +L
Sbjct: 222 YNTMMMIYGKTLEHEKANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G++P+ Y S++ +G+A+ + S+ EM+ G+ Y+TLL M +
Sbjct: 68 SRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C + T + MI + EA+ +F M + G EPN+
Sbjct: 128 QKFLEALSVFAEMREIK-CLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
LSP+ TY++L+ +G+ +D LS ++M++ + + LY+ L+ + + +A
Sbjct: 4 ALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSKA 63
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
IF +K S PD ++SMI + EA ++ +EM AG P+ ++L+
Sbjct: 64 ISIFSRLKRS-GITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLT 122
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
Y + Q+ L L + + R CLLN++T
Sbjct: 123 MYVENQKF---------LEALSVFAEMREIKCLLNLIT 151
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + +++
Sbjct: 306 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMINLF 365
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ K+ V ++++M G P+ N A +L AYG+ R E Y EM+++G S
Sbjct: 366 SKYKKYSNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLREFEKANDAYTEMQDEGCXFS 424
>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
fucata]
Length = 382
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 138 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 197
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 198 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 258 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 312
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 313 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 359
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 73 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 132
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 133 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 192
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 193 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQI 251
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 285
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 64 GEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 182
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 183 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 242
Query: 312 ELGITPD 318
GI D
Sbjct: 243 SSGIEID 249
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 326
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G
Sbjct: 327 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 122/242 (50%), Gaps = 3/242 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ +I + A D + +M+ GV PN++T+N L++ + + + + + +
Sbjct: 431 SYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESL 490
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+NGL P+ T++S++ + + E+ L + EM E G+ + +YN L+ +G
Sbjct: 491 LENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDV 550
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ ++ M+ E PD+++++++I I KV +A+ +F+ M +G P+ + ++
Sbjct: 551 ARSVKLLRRMQ-KEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSA 609
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP-KEELGKLVE-CVEKS 347
I+ ++ R ++ + + G +PD C ++ ++ Q EE ++E C +K
Sbjct: 610 FIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKG 669
Query: 348 NS 349
S
Sbjct: 670 IS 671
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 140/288 (48%), Gaps = 11/288 (3%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
+V+E ++ GVK + Y L++ + + + + +Y ++ +GL N +Y ++ +
Sbjct: 380 DVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCF 439
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQP 247
RA+ ++ +R+M+ +G+ ++ +NTL+ C D G D+A ++ E + + +P
Sbjct: 440 CRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKD-GAIDKARKLLESLLEN-GLKP 497
Query: 248 DSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
D +TFSS++ +C + + EA F EM+E G PN + LI+ V+
Sbjct: 498 DIFTFSSIVDGLCQIK-RTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKL 556
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN-SKLGYVVKLLLEEQDI 364
L R+ + GI+PD L+ + + K E+ KL + + +S + Y +E
Sbjct: 557 LRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSE 616
Query: 365 EGDFKKEATELFNSISKD---VKKAYCNCLIDLCVNLNLLENACKLLE 409
G +EA ++F S+ + CN +I + V +E A ++E
Sbjct: 617 SGRL-EEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIE 663
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Query: 139 VKPNMITYNN----LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
V P + +N+ L +T+ R + +E+ + G + +LL ++GR
Sbjct: 101 VNPTLAAHNSVHRALRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLA 160
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ V+ ++ G+ + LYN L+ D A+ F+ M +++NC D +T+++
Sbjct: 161 NYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQM-AADNCVADRFTYNT 219
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I G V EA + +M + G PN+F T LI+ + A R D+ + + G
Sbjct: 220 LIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSG 279
Query: 315 ITPDD 319
+ P++
Sbjct: 280 VYPNE 284
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G P +N ++ + + + +++ + G+ Y +L+ + + E+
Sbjct: 354 GYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEG 413
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
VY ++ G+ +V YN ++ D A E F DM+ P+ TF+++I
Sbjct: 414 DRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQ-VRGVVPNLVTFNTLIN 472
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G + +A + +LE G +P++F +S++ + +RT++ + + E GI P
Sbjct: 473 GHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINP 532
Query: 318 D 318
+
Sbjct: 533 N 533
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 140/334 (41%), Gaps = 21/334 (6%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN +R+ + L+ +G G + +V+ ++ +G+ P YN L+D + ++
Sbjct: 136 RNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSI 195
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+++M + + TY +L+ + ++ L + R+MK+KG +V Y L
Sbjct: 196 DLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTML 255
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEA 278
+ DEAF +FE MK S P+ T +++ + C S+A + +E L+
Sbjct: 256 IEGFCIASRVDEAFGVFETMKDS-GVYPNEATVRALVHGVFRCVDP-SKALELLSEFLDR 313
Query: 279 GFEPN----LFVLTSLIQCYGKAQRTDDVVRALNR-LPELGITPDDRFCGCLLNVMTQTP 333
E + +++ C ++V L R L G P + ++ + +
Sbjct: 314 EQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGA 373
Query: 334 K-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD--VKKAYC-N 389
+ E + E + K K G L L E + ++++E ++ + D + + N
Sbjct: 374 ELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYN 433
Query: 390 CLIDLCVNLNLLENACKLLELGLTLEVYTDIQSR 423
+I+ L++NA E + D+Q R
Sbjct: 434 MIINCFCRAKLMDNAS---------EAFRDMQVR 458
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FS+++ + L + EM G+ PN + YN L+ ++ + +
Sbjct: 498 DIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLL 557
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M G+SP+ +Y +L++ + R E ++ M G+ Y+ + ++
Sbjct: 558 RRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSES 617
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +EA ++F M+++ C PDS+ + +I I + V EA+ + + G N
Sbjct: 618 GRLEEAKKMFYSMEAN-GCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLN 673
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+W I+PNA ++ LI+ T G+ + + M+ G+ P+ +YN L+ R +
Sbjct: 527 EWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVE 586
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ K ++ M+ +GL+P+ TY++ + A + E+ ++ M+ G + N ++
Sbjct: 587 KAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLII 646
Query: 221 AMCADVGYTDEAFEIFE 237
+ Y +EA I E
Sbjct: 647 KILVQQEYVEEAQNIIE 663
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 93 KSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
+S R +K I P+ +S LI+++ + +++ M G+ P+ TY+ +
Sbjct: 552 RSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFI 611
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ + + R + K ++ M NG SP+ +++ + Y E+ ++ ++KG+
Sbjct: 612 EALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGIS 671
Query: 211 LS 212
L+
Sbjct: 672 LN 673
>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
aristata]
Length = 382
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 138 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 197
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 198 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 258 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 312
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 313 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 359
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 73 PNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 132
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 133 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 192
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 193 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQI 251
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 285
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 64 GEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 182
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 183 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 242
Query: 312 ELGITPD 318
GI D
Sbjct: 243 SSGIEID 249
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 326
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G
Sbjct: 327 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 6/235 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW-QVKTI 165
D + LI + G + + + +++EMK + PN++TYN ++ ++ AK P + +
Sbjct: 328 DVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSW 387
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M +G+ P+ TY+ L+ Y + E L + EM EKG Y +L+
Sbjct: 388 FERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGV 447
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSW-TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D A E+F+++K ENC S ++ MI G+++EA +FNEM + G P++
Sbjct: 448 AKRYDVANELFQELK--ENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDV 505
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT--PKEEL 337
+ +L+ +A+R D+ + E G TPD +LN + +T PK L
Sbjct: 506 YAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGAL 560
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + D + +++EMK G++P Y L+ + + + +
Sbjct: 223 DTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLV 282
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM TY L+R G++ ED Y+ M + G + V L N L+ +
Sbjct: 283 KEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRS 342
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ +A ++F++MK NC P+ T++++I ++ + +SEA + F M + G P+ F
Sbjct: 343 NHLRDAIKLFDEMKLL-NCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSF 401
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ LI Y K R + + L + E G P
Sbjct: 402 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 433
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ +IK +G G + +N++ EMK +G P++ YN L+ M RA+R + ++++ M
Sbjct: 472 VYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTM 531
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+NG +P+ N++ +L R + L ++ +MK ++ V +NT+L + G
Sbjct: 532 EENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLF 591
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMI 256
+EA ++ ++M SS+ Q D T+SS++
Sbjct: 592 EEAAKLMQEM-SSKGFQYDLITYSSIL 617
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P A+ +LI G A +D +++E+K + Y ++ G+ R + ++
Sbjct: 435 PAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFN 494
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G +P+ Y +L+ RA ++ S++R M+E G + +N +L A G
Sbjct: 495 EMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTG 554
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
A E+F MK+S +PD +F++++ S G EA + EM GF+ +L
Sbjct: 555 GPKGALEMFTKMKNS-TIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITY 613
Query: 288 TSLIQCYGKA 297
+S+++ GK
Sbjct: 614 SSILEAVGKV 623
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 100 RNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +K I P++F S LI Y + L + EEM G P Y +L++T+G AK
Sbjct: 390 RMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAK 449
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R +++E+ +N + YA +++ +G+ + ++++ EMK+ G V YN
Sbjct: 450 RYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYN 509
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ DEAF +F M+ + C PD + + ++ + G A MF +M
Sbjct: 510 ALMTGMVRAERMDEAFSLFRTMEEN-GCTPDINSHNIILNGLARTGGPKGALEMFTKMKN 568
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +P++ +++ C +A ++ + + + G D
Sbjct: 569 STIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYD 609
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 12/222 (5%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P A ++TL+ +Y G + L + +EM+A + TY L+ +G++ R
Sbjct: 255 LQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAY 314
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
YK M +G P+ +L+ GR+ + D + ++ EMK +V YNT++ ++
Sbjct: 315 MTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSL 374
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
EA FE MK + P S+T+S +I +V +A + EM E GF P
Sbjct: 375 FEAKAPLSEASSWFERMK-KDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 433
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
SLI G A+R D L E CGC
Sbjct: 434 CPAAYCSLINTLGVAKRYDVANELFQELKE--------NCGC 467
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 23/258 (8%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
K + W P + +A ++ + D R E +ID S I+ + AG
Sbjct: 64 KIFKW-GPDAEKALEVLKLKVDPRLVREILKIDVEV-SVKIQFFKWAG------------ 109
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K + + TY L+ + + +V ++M + + ++R G+A+
Sbjct: 110 KRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMV 169
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
LSV+ ++K + + + + YN+++ M G+ ++ E++ +M S +C PD+ T+S+
Sbjct: 170 NRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSA 229
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I+ + + A +F+EM E G +P + T+L+ Y K + ++ LG
Sbjct: 230 LISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEA---------LG 280
Query: 315 ITPDDRFCGCLLNVMTQT 332
+ + R CLL V T T
Sbjct: 281 LVKEMRARRCLLTVFTYT 298
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 69 KTGSSPKSYIW--VNPKSPRASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFD 125
K G +P Y + + RA ++ E R E D N+ + ++ G
Sbjct: 498 KLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPK 557
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
G L ++ +MK +KP+++++N +L + RA + + +EM+ G + TY+S+L
Sbjct: 558 GALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSIL 617
Query: 186 RAYGRA 191
A G+
Sbjct: 618 EAVGKV 623
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 3/216 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P+A ++ LI Y N +++EM A G+KP TY +LL + + R +
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++K++T G+ P+ + +L+ + + + ++M + +NT++
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +EA E+F++MK +PD +F+++I+ S RG + +A + NEML+ GF P
Sbjct: 512 CREGKVEEARELFDEMK-RRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ +L+Q K Q D L + G+TPDD
Sbjct: 571 VLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 36/242 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI + GN D +EM G+ P M TYN+L+ + +R + + + KE+
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+SP+ TY L+ Y R + ++ EM G++ + Y +LL + +
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMIT-ICS----------------------------- 260
EA ++F+ + +SE PD F+++I CS
Sbjct: 449 EADDLFKKI-TSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507
Query: 261 ----CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
CR GKV EA +F+EM G +P+ +LI Y + D R N + + G
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567
Query: 316 TP 317
P
Sbjct: 568 NP 569
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 110/221 (49%), Gaps = 5/221 (2%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ +I+P++F+ +LI G + ++EEM G++P+ + YN L+D K
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN-KGN 341
Query: 160 WQVKTIYK-EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + YK EM G+SP +TY SL+ A + ++ + +E++EKG+ YN
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ +AF + ++M +S +P T++S++ + S + ++ EA+ +F ++
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLAS-GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
G P++ + +LI + L + + + PD+
Sbjct: 461 GVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDE 501
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ +I + G + M+ GVKPN++TYN ++ + R I M
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ P+ TY SL+ + E+ ++ EM +KG++ S +YNTL+ + G D
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A ++D + P T++S+I + EAE M E+ E G P+ L
Sbjct: 344 MA-SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I Y + + + GI P + LL+V+++
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
++L+ L+ + +Y EM + +K ++ T+N +++ + + + + K M
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
+G+ PN TY +++ Y + E ++ MK + ++ Y +L++ G +E
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A +IFE+M + +P + ++++I +G + A A +EML+ G P + SLI
Sbjct: 310 ASKIFEEM-VQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
QRTD+ + + E GI+PD L+N
Sbjct: 369 HALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ ++ P+ F+T+++ + G + +++EMK G+KP+ I++N L+ R
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ EM D G +P TY +L++ + + G+ + +EM KGM T Y TL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 220 LAMCADVGYTDE 231
+ A V DE
Sbjct: 613 IEGIAKVNIPDE 624
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI + + N G + ++M + V P+ +T+N ++ R + + + ++
Sbjct: 465 DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ P+ ++ +L+ Y R +D V EM + G +V YN L+
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
D A E+ ++M S+ PD T+ ++I
Sbjct: 585 QEGDLAEELLKEM-VSKGMTPDDTTYFTLI 613
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 93/221 (42%), Gaps = 14/221 (6%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKA----IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
L+K G + ++E + A +G K + I ++ L+ + R + + M
Sbjct: 119 LLKQALGGGTTNSIREIFEFLAASRDRLGFKSS-IVFDYLIKSCCDMNRADEAFECFYTM 177
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G+ P T SLL + + E +Y EM ++ SV +N ++ + G
Sbjct: 178 KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKL 237
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A + M++S +P+ T+++++ G+V A+A+ M EP+ F S
Sbjct: 238 KKAKDFVGHMETS-GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
LI K R ++ + + + G+ P D FC
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC 337
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K R +P+ +++L+ + AGN V+ EMK G++PN+ TY+ ++D + R+ +
Sbjct: 208 KDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQIT 267
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ EM D G PN T+ +L+R + +A E L VY +MK G YN L+
Sbjct: 268 RAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLI 327
Query: 221 -AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ C D +EA +I +K + C ++ +F+ + S G V+ A MF +M +
Sbjct: 328 ESHCRD-DNLEEAVKILNSVK--KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLK 384
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
PN L++ + + TD V++ + E I P+ FCG
Sbjct: 385 CRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCG 436
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DPNA F+ L++++ AG + L VY +MK +G P+ ITYN L+++ R +
Sbjct: 282 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVK 341
Query: 165 I----------------------------------YKEMTDNGLSPNWNTYASLLRAYGR 190
I + +M D PN TY L+R +
Sbjct: 342 ILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFAD 401
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ + L + +EM E ++ + Y L++ +G+ + A+ F++M + +P
Sbjct: 402 KKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLP 461
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ ++ G++ + E + +M+ GF
Sbjct: 462 VYEMVLQQLRKAGQLKKHEELVEKMVNRGF 491
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ ++F+ + G+ + ++ +MK + +PN +TYN L+ K V +
Sbjct: 352 LNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKL 411
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLLAMCA 224
KEM +N + PN NTY L+ + + + S ++EM +EK ++ S+ +Y +L
Sbjct: 412 RKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLR 471
Query: 225 DVGYTDEAFEIFEDM 239
G + E+ E M
Sbjct: 472 KAGQLKKHEELVEKM 486
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G SP Y ++ G+A + + + M++ G + ++ +++ + EA
Sbjct: 143 GHSPE--PYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEA 200
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
F+ +K + +PD ++S++ G +SEAE +F EM AG +PN++ + +I
Sbjct: 201 QSFFDSLK--DRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVID 258
Query: 293 CY---GKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
G+ R DV + + ++G P+ L+ V + + E K+++ V
Sbjct: 259 ALCRSGQITRAHDV---FSEMIDVGCDPNAITFNNLMRVHVKAGRTE--KVLQ-VYNQMK 312
Query: 350 KLG----YVVKLLLEEQDIEGDFKKEATELFNSISK 381
+LG + L E D +EA ++ NS+ K
Sbjct: 313 RLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK 348
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 118/238 (49%), Gaps = 3/238 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K ++ F+ + + Y A ++ + +M+ G+K N LLDT+ ++++ +
Sbjct: 67 QKGLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVER 126
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL- 220
+ ++ +M G + +Y LL +G+ + + VY EMK++G + V Y L+
Sbjct: 127 AQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILIN 186
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
A C Y D+A E+F +M+ ++NC+P + ++I ++SEA F +GF
Sbjct: 187 AHCKSRRY-DDAIELFHEME-AKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGF 244
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
P +++ Y ++R DDV R ++ + + G+ P R +L+ + + K ++
Sbjct: 245 VPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIA 302
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 1/218 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++E + D + LI + + +D + ++ EM+A KP+ Y L++ +G KR
Sbjct: 170 KDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRL 229
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +G P TY +++ AY + +D EM++ G+ S Y+ +
Sbjct: 230 SEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDII 289
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L G T A+ +F+ M S E CQP T+ ++ + +V A ++++M G
Sbjct: 290 LHHLIRAGKTKIAYSVFQKM-SCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKG 348
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P + + ++LI + D+ + ++GI P
Sbjct: 349 ILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRP 386
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 3/235 (1%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN 142
KS R E ++ A+N K P+ + TLI G L +E KA G P
Sbjct: 190 KSRRYDDAIELFHEMEAKNCK--PSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPE 247
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
TYN ++ ++R V+ EM G+ P+ TY +L RA + SV++
Sbjct: 248 APTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQ 307
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+M +G Q SV+ Y ++ M + D A ++++ MK+ + P FS++I
Sbjct: 308 KMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKA-KGILPVMHMFSTLINSLCHE 366
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
K+ EA F EML+ G P + ++L Q + D VV +L +L P
Sbjct: 367 SKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDKLRKAP 421
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G + +Y +L+ + G+ + ++ +MK+KG+ L+ + + A EA
Sbjct: 34 GFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGL-LNKETFALISRRYARARKVKEA 92
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
+ F M+ S + T+C R +V A+ +F++M + GF ++ T L++
Sbjct: 93 VDAFMKMEKFGLKIESSDVNRLLDTLCKSR-QVERAQLVFDKMNKRGFVADIKSYTILLE 151
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+G+ + ++ N + + G PD G L+N ++ +
Sbjct: 152 GWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRR 193
>gi|410110097|gb|AFV61128.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
rugosa]
Length = 348
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 120 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 179
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 180 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 239
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 240 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 294
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 295 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 341
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 55 PNTXSYSTLLTMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 114
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 115 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 174
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 175 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 233
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 267
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ ++++ +K G P+++ YN +++ G+AK + +++ EM G+ PN +Y+
Sbjct: 2 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYS 61
Query: 183 SLLRAYGRARYGEDTLSVYREMKE-----------------------------------K 207
+LL Y + + LSV+ EM+E
Sbjct: 62 TLLTMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++ +V YNTLL + D EA +F M+ +N + + T++SM+ I + +
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEK 180
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A + EM G EPN +++I +GK + D +L G+ D
Sbjct: 181 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 231
>gi|410110131|gb|AFV61145.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rehmannii]
Length = 379
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 138 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 197
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 198 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 258 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 312
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 313 VKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLN 359
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 73 PNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 132
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 133 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 192
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 193 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 251
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 285
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ + ++ +K G P+++ YN +++ G+AK + +++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN ++Y++LL Y + + LSV+ EM+E
Sbjct: 64 GEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 182
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 183 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 242
Query: 312 ELGITPD 318
G+ D
Sbjct: 243 SSGVEID 249
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 50/113 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 326
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E
Sbjct: 327 SKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQXFDKANDVYMEMQE 379
>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
pusilla]
Length = 381
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 138 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 197
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 198 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 258 VXYERAGLIAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 312
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 313 VKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLN 359
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 73 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 132
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 133 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 192
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ G E +
Sbjct: 193 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQI 251
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 252 LFQTMIVXYERAGLIAHAKRLLHELKRPDNIPRD 285
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 182
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 183 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 242
Query: 312 ELGITPD 318
G+ D
Sbjct: 243 STGVEID 249
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 326
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E G
Sbjct: 327 SKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 381
>gi|410110115|gb|AFV61137.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hederifolia]
Length = 364
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 120 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHE 179
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 180 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 239
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 240 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 294
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 295 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 341
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 55 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 114
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 115 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGK 174
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 175 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 233
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 267
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ ++++ +K G P+++ YN +++ G+AK + +++ EM G+ PN +Y+
Sbjct: 2 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 61
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+LL Y + + LSV+ EM+E L +T N ++ + +G EA ++F M+
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+P+ ++++++ + EA +F M E N+ S++ YGK +
Sbjct: 122 -GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEK 180
Query: 303 VVRALNRLPELGITPD 318
+ + GI P+
Sbjct: 181 ANNLIQEMQSRGIEPN 196
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 249 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 308
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G
Sbjct: 309 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 363
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 179 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 238
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 239 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 298
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 299 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 353
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 354 VKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSDVIALVLN 400
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ + ++ T N ++D G+ + +
Sbjct: 114 PNTASYSTLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKL 173
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 174 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 233
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 234 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 292
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 293 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 326
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 45 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 104
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM +G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 105 SEMKXSGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQL 164
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 165 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 223
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 224 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 283
Query: 312 ELGITPD 318
G+ D
Sbjct: 284 SSGVEID 290
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 10 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 69
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + Y+TLL M +
Sbjct: 70 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVEN 129
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 130 KKFLEALSVFSEMREVK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 188
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 189 YNTLLRVYGDAE 200
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 60
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A IF +K S PD +++MI + EA ++ +EM +G PN
Sbjct: 61 DYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASY 119
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 120 STLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQ 163
>gi|255557995|ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540790|gb|EEF42350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1040
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 78 IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI 137
I V S R + ++ ++ E +D A++ IK AG ++YE M ++
Sbjct: 692 IIVKALSNRGKHQEAENIVRKSIRENMDLDTVAYNIFIKAMLEAGRLHFAASIYEHMLSL 751
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
GV P++ TYN ++ GR ++ + I+ +G+S + Y +++ YG+A +
Sbjct: 752 GVTPSIQTYNTMISVYGRGEKLDKAVEIFNTACSSGVSLDEKAYMNMVSYYGKAGKRNEA 811
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++ +M+E+G++ YN ++ + A G EA E+F M+ + PDS+T+ S++
Sbjct: 812 SLLFTKMQEEGIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQ-RDGWPPDSFTYLSLVQ 870
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ K SEAE + M + G P+ L+ Y KA + R +L G++P
Sbjct: 871 AYTESLKYSEAEETIDGMPKKGVLPSCSHFNHLLSAYAKAGLMVEAERVYKKLLTSGLSP 930
Query: 318 D 318
D
Sbjct: 931 D 931
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 141/305 (46%), Gaps = 12/305 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A T++ Y G + Y ++ G+ ++ YN +L ++ + +V ++
Sbjct: 221 DEVACGTMLCSYARWGRHKAMFSFYSAIRERGITLSVSVYNFMLSSLQKKSLHGRVIELW 280
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D ++PN TY ++ + + E+ V+ EMK G Y+ L+ +
Sbjct: 281 RQMVDKAVAPNTFTYTVVISSLVKEGLHEEAFKVFNEMKNTGHVPEEVTYSLLITVNTKK 340
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA ++ED+ S P ++T +S++T+ G S+A ++F EM + +
Sbjct: 341 GNWDEAGRLYEDL-ISHGLVPSNFTCASLLTMYYKNGDFSKALSLFMEMQSKKIAADEVI 399
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLVECVE 345
LI+ YGK DD + +LG+ D++ + V + E ++E ++
Sbjct: 400 YGLLIRIYGKLGLYDDAQKTFEETEQLGLLSDEKTYLAMAQVHLNSGNSEKALSVIEVMK 459
Query: 346 KSN---SKLGYVVKLLLEEQDIEGDFK-KEATELFNSISKD--VKKAYCNCLIDLCVNLN 399
N S+ Y+V LL+ ++ D EAT + ++SK CN +++L + L+
Sbjct: 460 SRNIWLSRFAYIV--LLQCYVMKEDLDCAEAT--YQALSKTGLPDAGSCNDMLNLYLRLD 515
Query: 400 LLENA 404
L E A
Sbjct: 516 LTEKA 520
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
S ++K G N+ + + + + YN + M A R +IY+ M
Sbjct: 689 GVSIIVKALSNRGKHQEAENIVRKSIRENMDLDTVAYNIFIKAMLEAGRLHFAASIYEHM 748
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G++P+ TY +++ YGR + + ++ G+ L Y +++ G
Sbjct: 749 LSLGVTPSIQTYNTMISVYGRGEKLDKAVEIFNTACSSGVSLDEKAYMNMVSYYGKAGKR 808
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+EA +F M+ E +P +++ MI + + G EA+ +F+ M G+ P+ F S
Sbjct: 809 NEASLLFTKMQ-EEGIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQRDGWPPDSFTYLS 867
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITP 317
L+Q Y ++ + + ++ +P+ G+ P
Sbjct: 868 LVQAYTESLKYSEAEETIDGMPKKGVLP 895
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ +++ YG G + EM G +P+ + +L + R R + + Y +
Sbjct: 189 VYTIVLRTYGQVGKIKLAEQTFLEMLEAGCEPDEVACGTMLCSYARWGRHKAMFSFYSAI 248
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G++ + + Y +L + + + ++R+M +K + + Y +++ G
Sbjct: 249 RERGITLSVSVYNFMLSSLQKKSLHGRVIELWRQMVDKAVAPNTFTYTVVISSLVKEGLH 308
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+EAF++F +MK++ + P+ T+S +IT+ + +G EA ++ +++ G P+ F S
Sbjct: 309 EEAFKVFNEMKNTGHV-PEEVTYSLLITVNTKKGNWDEAGRLYEDLISHGLVPSNFTCAS 367
Query: 290 LIQCYGKAQRTDDVVRALNRLPEL---GITPDDRFCGCLLNV 328
L+ Y K D +AL+ E+ I D+ G L+ +
Sbjct: 368 LLTMYYK---NGDFSKALSLFMEMQSKKIAADEVIYGLLIRI 406
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++I Y +L T G+ + + + EM + G P+ ++L +Y R + S
Sbjct: 185 PSVIVYTIVLRTYGQVGKIKLAEQTFLEMLEAGCEPDEVACGTMLCSYARWGRHKAMFSF 244
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
Y ++E+G+ LSV++YN +L+ E++ M + P+++T++ +I+
Sbjct: 245 YSAIRERGITLSVSVYNFMLSSLQKKSLHGRVIELWRQM-VDKAVAPNTFTYTVVISSLV 303
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
G EA +FNEM G P + LI K D+ R L G+ P +
Sbjct: 304 KEGLHEEAFKVFNEMKNTGHVPEEVTYSLLITVNTKKGNWDEAGRLYEDLISHGLVPSNF 363
Query: 321 FCGCLLNV 328
C LL +
Sbjct: 364 TCASLLTM 371
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 5/224 (2%)
Query: 75 KSYIWVNPKSPRASKLKEKSY-DTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
K+Y+ + +A K E S T+ + E + +++ +IK++ AG + ++
Sbjct: 793 KAYMNMVSYYGKAGKRNEASLLFTKMQEEGIKPGKVSYNIMIKVFAIAGLYHEAKELFHA 852
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ G P+ TY +L+ + + + + M G+ P+ + + LL AY +A
Sbjct: 853 MQRDGWPPDSFTYLSLVQAYTESLKYSEAEETIDGMPKKGVLPSCSHFNHLLSAYAKAGL 912
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ VY+++ G+ + Y +L D G ++ FE +K + + D + S
Sbjct: 913 MVEAERVYKKLLTSGLSPDLACYRAMLRGYLDYGQVEKGINFFEQIK--KYAESDRFIMS 970
Query: 254 SMITICSCRGKVSEAEAMFNEM--LEAGFEPNLFVLTSLIQCYG 295
+ + + GK AE + M L+ F NL V + ++ Y
Sbjct: 971 AAVHLYKFAGKEPMAEVLLGSMNNLKISFLHNLQVGSKIVSKYA 1014
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 3/216 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P+A ++ LI Y N +++EM A G+KP TY +LL + + R +
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++K++T G+ P+ + +L+ + + + ++M + +NT++
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +EA E+F++MK +PD +F+++I+ S RG + +A + NEML+ GF P
Sbjct: 512 CREGKVEEARELFDEMK-RRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ +L+Q K Q D L + G+TPDD
Sbjct: 571 VLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDD 606
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI + GN D +EM G+ P M TYN+L+ + +R + + + KE+
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+SP+ TY L+ Y R + ++ EM G++ + Y +LL + +
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMIT-ICS----------------------------- 260
EA ++F+ + +SE PD+ F+++I CS
Sbjct: 449 EADDLFKKI-TSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507
Query: 261 ----CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
CR GKV EA +F+EM G +P+ +LI Y + D R N + + G
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567
Query: 316 TP 317
P
Sbjct: 568 NP 569
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 5/221 (2%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ +I+P++F+ +LI G + ++EEM G++P+ + YN L+D K
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN-KGN 341
Query: 160 WQVKTIYK-EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + YK EM G+SP +TY SL+ A + ++ + +E++EKG+ YN
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ +AF + ++M +S +P T++S++ + S + ++ EA+ +F ++
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLAS-GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
G P+ + +LI + L + + + PD+
Sbjct: 461 GVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDE 501
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 1/221 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ +I + G + M+ GVKPN++TYN ++ + R I M
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ P+ TY SL+ + E+ ++ EM +KG++ S +YNTL+ + G D
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A ++D + P T++S+I + EAE M E+ E G P+ L
Sbjct: 344 MA-SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
I Y + + + GI P + LL+V+++
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
++L+ L+ + +Y EM + +K ++ T+N +++ + + + + K M
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
+G+ PN TY +++ Y + E ++ MK + ++ Y +L++ G +E
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEE 309
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A +IFE+M + +P + ++++I +G + A A +EML+ G P + SLI
Sbjct: 310 ASKIFEEM-VQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
QRTD+ + + E GI+PD L+N
Sbjct: 369 HALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI + + N G + ++M + V P+ +T+N ++ R + + + ++
Sbjct: 465 DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ P+ ++ +L+ Y R +D V EM + G +V YN L+
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
D A E+ ++M S+ PD T+ ++I
Sbjct: 585 QEGDLAEELLKEM-VSKGMTPDDTTYFTLI 613
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ ++ P+ F+T+++ + G + +++EMK G+KP+ I++N L+ R
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ EM D G +P TY +L++ + + G+ + +EM KGM T Y TL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612
Query: 220 LAMCADVGYTDE 231
+ A V DE
Sbjct: 613 IEGIAKVNIPDE 624
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 79/187 (42%), Gaps = 9/187 (4%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
I ++ L+ + R + + M + G+ P T SLL + + E +Y E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M ++ SV +N ++ + G +A + M++S +P+ T+++++ G
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS-GVKPNIVTYNTIVHGYCSSG 270
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----- 318
+V A+A+ M EP+ F SLI K R ++ + + + G+ P
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330
Query: 319 ---DRFC 322
D FC
Sbjct: 331 TLIDGFC 337
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
GV+PN TYN +++ +A I ++ G P+ TY+SL+
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++V+ E EKG + S+ LYNTL+ + G +A ++ +DM C PD WT++ ++
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM-MEHGCSPDIWTYNLVVN 434
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G +S+A + N+ + G P++F +LI Y K + D + L+ + GITP
Sbjct: 435 GLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITP 494
Query: 318 DDRFCGCLLNVMTQTPK 334
D LLN + + K
Sbjct: 495 DVITYNTLLNGLCKARK 511
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI Y N D + + + M + G+ P++ITYN LL+ + +A++ V +
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTF 519
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + G +PN TY L+ ++ + R + + +++EMK +G+ + TL+
Sbjct: 520 KAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSN 579
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A+E+F ++ + F+ MI + VS AE +F++M + P+ +
Sbjct: 580 GELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYT 639
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+I Y K D L G+ P CG +LN + T +
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+N ++ + +++ YG G +NV+E M +P++ +YN +++ +
Sbjct: 68 KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYF 127
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q +Y M D G+ P+ T+ ++++ L + M +G + + Y +
Sbjct: 128 SQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAV 187
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++ EA+ +F++M C PD TF+ +I + +G V E+E +F+++++ G
Sbjct: 188 ISGFYKENCQIEAYHLFDEMLKQGIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PNLF IQ + D+ R L + G+TPD
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPD 285
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S+LI G+ + + V+ E G K ++I YN L+ + + Q +
Sbjct: 355 DEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM 414
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K+M ++G SP+ TY ++ + D + + KG + +NTL+
Sbjct: 415 KDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQ 474
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D+A EI + M S PD T+++++ +C R K+ F MLE G PN+
Sbjct: 475 RNMDKAIEILDTM-LSHGITPDVITYNTLLNGLCKAR-KLDNVVDTFKAMLEKGCTPNII 532
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI+ + K ++ + + + G+TPD
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ A D ++ ++ M G PN+ITYN L+++ + ++ + ++
Sbjct: 495 DVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLL-AMCA 224
KEM GL+P+ T +L+ + ++ + KE S ++N ++ A C
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCE 614
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ + A ++F M S+ C PD++T+ MI G + A E + G P+
Sbjct: 615 KLNVS-MAEKLFHKMGGSD-CAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSF 672
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++ C R + V +N + + GI P++
Sbjct: 673 TTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 109/245 (44%), Gaps = 4/245 (1%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEM 134
YI + R K++E + + R + + +P+ +++ ++ + G F VY M
Sbjct: 79 YIGIMRDYGRKGKVQE-AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K IG+ P++ T+ + + RP + M G N +Y +++ + +
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ ++ EM ++G+ + +N L+ + G E+ ++F + C P+ +TF+
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVC-PNLFTFNI 256
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
I +G + EA + ++ G P++ +LI + K + + L+++ G
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316
Query: 315 ITPDD 319
+ P++
Sbjct: 317 VEPNE 321
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 126 GCLN----VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
GCL+ + + A G P++ T+N L+D + + + I M +G++P+ TY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMK 240
+LL +AR ++ + ++ M EKG ++ YN L+ + C D + EA E+F++MK
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS-EAMELFKEMK 558
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ PD T ++I G++ +A +F
Sbjct: 559 -TRGLTPDIVTLCTLICGLCSNGELDKAYELF 589
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW-NTYASLLRAYGRARYGED 196
G K + TY +++ +G + ++ + EM N S Y ++R YGR ++
Sbjct: 35 GFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQE 94
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
++V+ M + SV YN ++ + + GY +A +++ MK PD +T + +
Sbjct: 95 AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI-GIYPDVYTHTIRM 153
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G+ + A + N M G E N ++I + K + + + + GI
Sbjct: 154 KSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGIC 213
Query: 317 PD 318
PD
Sbjct: 214 PD 215
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 137 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 196
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 197 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 256
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 257 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 311
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 312 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLN 358
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 70 VXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 129
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 130 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIY 189
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 190 GKTLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 248
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 249 QILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 284
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 63 SEMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 181
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 182 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 241
Query: 312 ELGITPD 318
G+ D
Sbjct: 242 SSGVEID 248
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 266 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 325
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ N +L AYG+ + + VY EM+E G
Sbjct: 326 SKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLNAYGKLQEFDKANDVYMEMQEVG 380
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 120/226 (53%), Gaps = 1/226 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T++ + G+ D + Y EM G+ P+++TY++++ + +A+ + +
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVL 259
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ P+ TY S+L Y + ++ + ++M+ G++ +V Y++L+
Sbjct: 260 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + EA +IF+ M + +PD T+ +++ + +G + E A+ + M+ G +P+ V
Sbjct: 320 GRSTEARKIFDSM-TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI Y K ++ D + +++ + G+ P+ G +++V+ ++
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 129/289 (44%), Gaps = 12/289 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ LI Y D + V+ +M+ G+ PN++ Y ++D + ++ +
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D GL+PN Y SL+ + + EM ++G+ L+ +N+++
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E+ ++F D+ +PD T++++I C GK+ EA + M+ G +P++
Sbjct: 495 GRVIESEKLF-DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVECVE 345
+LI Y + R DD + + G++P+ +L + T + K L +
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
KS ++L ++ + + EA +F ++ CL DL
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL----------CLTDL 652
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 153/338 (45%), Gaps = 13/338 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+Y T I P+ +S++I A D + V M GV P+ +TYN++
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L + +P + K+M +G+ PN TY+SL+ + + ++ M ++G+
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ + Y TLL A G E + D+ QPD F+ +I + + KV +A
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALL-DLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+F++M + G PN+ ++I K+ DD + ++ + G+TP+ L++ +
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Query: 330 TQTPK----EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK-DVK 384
K EEL ++E +++ +++ EG E+ +LF+ + + VK
Sbjct: 457 CTCDKWDKAEEL--ILEMLDRGICLNTIFFNSIIDSHCKEGRVI-ESEKLFDLMVRIGVK 513
Query: 385 KAYC--NCLIDLCVNLNLLENACKLLELGLTLEVYTDI 420
N LID C ++ A KLL +++ V DI
Sbjct: 514 PDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
EK +D R + D ++TLI AG D + M ++GVKP+++TY L++
Sbjct: 501 EKLFDLMVR-IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
R R ++KEM +G+SPN TY +L+ R +Y + + G QL
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G++ EA+ +
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKCGRMDEAKDL 678
Query: 272 FNEMLEAGFEPNL----FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
F G P++ + +LI+ G + DD+ ++ E G + D R ++
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIE-QGSLEELDDLFLSME---ENGCSADSRMLNSIVR 734
Query: 328 VMTQ 331
+ Q
Sbjct: 735 KLLQ 738
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L++ + + G P++++YN +L+ + + + Y EM D G+ P+ TY+S++ A
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 245
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+A+ + + V M + G+ YN++L G EA + M+ S+ +P
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR-SDGVEP 304
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+SS++ G+ +EA +F+ M + G EP++ +L+Q Y ++ L
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ + GI PD L+ + K + LV
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 398
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 11/272 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+++I + G +++ M IGVKP++ITYN L+D A + + + M
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ TY +L+ Y R +D L++++EM G+ ++ YN +L T
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E++ + S Q + T++ ++ EA MF + + +
Sbjct: 604 AAKELYVSITKS-GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 662
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECVEKSNS 349
I K R D+ G+ PD R + N++ Q EEL L +E++
Sbjct: 663 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722
Query: 350 K-----LGYVVKLLLEEQDIEGDFKKEATELF 376
L +V+ LL+ GD + T LF
Sbjct: 723 SADSRMLNSIVRKLLQ----RGDITRAGTYLF 750
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 99/256 (38%), Gaps = 46/256 (17%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG---LSPNWNTYASLL 185
+V++E+ G ++ N L + R P + Y M G ++P +TYA L+
Sbjct: 41 HVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILI 99
Query: 186 ----RAYGRARYGEDTLS---------------------------------VYREMKEKG 208
RA GR G L V R M E G
Sbjct: 100 GCCCRA-GRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELG 158
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE--NCQPDSWTFSSMITICSCRGKVS 266
V YN LL D + EA E+ M PD ++++++ G
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSD 218
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+A + ++EML+ G P++ +S+I KAQ D + LN + + G+ PD +L
Sbjct: 219 KAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Query: 327 N--VMTQTPKEELGKL 340
+ + PKE +G L
Sbjct: 279 HGYCSSGQPKEAIGTL 294
>gi|410110133|gb|AFV61146.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rhodocnemis]
Length = 345
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 120 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 179
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 180 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 239
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 240 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 294
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 295 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 341
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 55 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 114
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 115 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 174
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 175 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 233
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 267
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ ++++ +K +G P+++ YN +++ G+AK + +++ EM G+ PN +Y+
Sbjct: 2 DYSKAISIFSRLKRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 61
Query: 183 SLLRAYGRARYGEDTLSVYREMKE-----------------------------------K 207
+LL Y + + LSV+ EM+E
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++ +V YNTLL + D EA +F M+ +N + + T++SMI I + +
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMIMIYGKTLEHEK 180
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A + EM G EPN +++I +GK + D +L G+ D
Sbjct: 181 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 231
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 124/251 (49%), Gaps = 8/251 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++T+I + G N++ EM GV P+++TY++ +D + +A+ + + +
Sbjct: 225 PNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELV 284
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M NG P+ TY ++ Y ++T ++REM +G+ + N+ ++
Sbjct: 285 LRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCK 344
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + EA E F+ M +++ +PD T+S ++ + G V + +FN M G +
Sbjct: 345 HGKSKEAAEFFDSM-AAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHS 403
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
V LI YGK D+ + ++ E G+ PD G ++ ++ +G+L + ++
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSR-----MGRLADAMD 458
Query: 346 KSNSKLGYVVK 356
K N + +K
Sbjct: 459 KFNQMIAMGLK 469
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I Y G + ++ EM G+ P++ T N+ + ++ + + + +
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G P+ TY+ LL Y Y D L+++ M+ G+ ++YN L+
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKR 415
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA IF M+ PD+WT+ ++I S G++++A FN+M+ G +P+ V
Sbjct: 416 GMMDEAMLIFTQMQ-ERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIV 474
Query: 287 LTSLIQCY 294
SLIQ +
Sbjct: 475 YNSLIQGF 482
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S L+ Y G LN++ M+ G+ + YN L+D G+ + I+
Sbjct: 366 DLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIF 425
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + G+ P+ TY +++ A+ R D + + +M G++ +YN+L+
Sbjct: 426 TQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMH 485
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E+ +M S +P++ F+S+I G+V EA+ +F+ ++ G P++
Sbjct: 486 GNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVIT 545
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI YG + + L+ + +GI PD
Sbjct: 546 FNSLIDGYGLVGKMEKAFGVLDAMISVGIEPD 577
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++ LI YG G D + ++ +M+ GV P+ TY ++ R R +
Sbjct: 401 DHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKF 460
Query: 167 KEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGM-QLSVTLYNTLLAM 222
+M GL P+ Y SL++ + G ++ +S EM +G+ + + +N+++
Sbjct: 461 NQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELIS---EMMSRGIPRPNTVFFNSIINS 517
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G EA +IF D+ +PD TF+S+I GK+ +A + + M+ G EP
Sbjct: 518 LCKEGRVVEAQDIF-DLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEP 576
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ ++L+ Y + R DD + + G+ P G +L+
Sbjct: 577 DVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILH 621
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 11/266 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+++I G ++++ + IG +P++IT+N+L+D G + + +
Sbjct: 506 PNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGV 565
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M G+ P+ TY++LL Y R +D L ++REM KG++ + Y +L +
Sbjct: 566 LDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFN 625
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV-SEAEAMFNEMLEAGFEPNL 284
G T A ++ +M S S +I CR EA A+F ++ + N+
Sbjct: 626 DGRTVGAKKMCHEMIESGTTMDIST--CGIILGGLCRNNCDDEAIALFKKLGAMNVKFNI 683
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVEC 343
++ ++I K ++ ++ + + G+ P+ G ++ N++ + EE +
Sbjct: 684 AIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSL 743
Query: 344 VEKSNSK-----LGYVVKLLLEEQDI 364
+EKS L ++++LLE+ +I
Sbjct: 744 MEKSGCAPSSRLLNNIIRVLLEKGEI 769
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 103/203 (50%), Gaps = 3/203 (1%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK++ I+P+ +S L+ Y G D L ++ EM + GVKP ITY +
Sbjct: 560 EKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGII 619
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L + R K + EM ++G + + +T +L R ++ +++++++ +
Sbjct: 620 LHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNV 679
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ ++ + NT++ V +EA E+F+ + S+ P++ T+ MIT G V EA+
Sbjct: 680 KFNIAIINTMIDAMYKVRKREEANELFDSI-SATGLVPNASTYGVMITNLLKEGSVEEAD 738
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQ 292
MF+ M ++G P+ +L ++I+
Sbjct: 739 NMFSLMEKSGCAPSSRLLNNIIR 761
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 4/199 (2%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
EE + P + TYN L+D RA RP ++ GL + LL+ A
Sbjct: 108 EEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHA 167
Query: 192 RYGEDTLSV-YREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDM-KSSENCQPD 248
+ +D ++V M E G++ Y+T+L ++C D + A ++ M K S C P+
Sbjct: 168 KRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCED-SRSQRALDLLHTMVKKSGGCSPN 226
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+++++I G+VS+A +F+EM++ G P++ +S I KA+ D L
Sbjct: 227 VVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLR 286
Query: 309 RLPELGITPDDRFCGCLLN 327
++ G PD C+++
Sbjct: 287 QMISNGFEPDKVTYNCMIH 305
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 2/228 (0%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
K +D R E D +++TL+ Y G L V+ EM G+ P+++T+ +L+
Sbjct: 243 RKVFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+A Q + +M + GL N T+ +L+ + + + +D L EM++ G+Q
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
SV YN L+ +G D A E+ +M+ ++ +PD T+S++I+ G + A +
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREME-AKRVKPDVVTYSTIISGYCKVGNLDSAFQL 420
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ML+ G P+ +SLI+ + +R +D + +LG+ PD+
Sbjct: 421 NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 126/264 (47%), Gaps = 10/264 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R R++ F+ LI + G D L EEM+ G++P+++ YN L++ + R
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +EM + P+ TY++++ Y + + + ++M +KG+ Y++L
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + ++A E+FE+M QPD +T++++I G V +A ++ +EM+ G
Sbjct: 440 IRGLCEEKRLNDACELFENMLQL-GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
P++ + LI K+ RT + R L +L PD+ L M K E
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL---MLCCSKAEFKS 555
Query: 340 LVECVEKSNSKLGYVVKLLLEEQD 363
+V ++ G+ +K L++E D
Sbjct: 556 VVALLK------GFCMKGLMKEAD 573
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY-GRARYGED 196
G P++ YN +L + A P + M +G++PN TY L+RA R R E+
Sbjct: 113 GYAPSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRL-EE 170
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ V +M+ G + YNTL+A G D A + M+ N +P+ TF+SM+
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G++ A +F+EM+ G P++ +L+ Y K + + + + + G+
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 317 PD 318
PD
Sbjct: 291 PD 292
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E R+ P+ +ST+I Y GN D + ++M GV P+ ITY++L+ + KR
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+++ M G+ P+ TY +L+ + + E LS++ EM KG+ V Y+ L
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGK 264
+ + T EA + + E+ PD+ + +++ CS +G
Sbjct: 510 INGLSKSARTKEAHRLLFKL-YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 568
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EA+ ++ ML+ ++ + V + LI + + + ++ G +P+
Sbjct: 569 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622
>gi|410110121|gb|AFV61140.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
lupulina]
Length = 257
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 13 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 72
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 73 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMI 132
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 133 VAYERAGLIAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 187
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 188 VKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLN 234
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 142 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 201
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E G
Sbjct: 202 SKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 256
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 88 SKLKEKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
++ EK+ + R + E+ R + ++ +I +YG + + V++EM++IG K N+ T
Sbjct: 62 ARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICT 121
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L++ R + + +++EM G P+ Y +L+ AY RA + + ++ M+
Sbjct: 122 YTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQ 181
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
G + YN L+ G EA +FE +K + P + ++ + G V
Sbjct: 182 HMGCEPDRASYNILVDAYGRAGLHREAEAVFESLK-RQGMAPTMKSHMLLLAAHARSGNV 240
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+ E + ++ ++G P+ L +++ YG+A R DD+ R L + G
Sbjct: 241 ARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRG 289
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 2/224 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ VY+ MK + N TY +++ G++K+P ++KEM G N TY +L+ A
Sbjct: 69 VEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNA 128
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R E V+ EM++ G + V YN L+ + G+ A EIF M+ C+P
Sbjct: 129 FAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHM-GCEP 187
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D +++ ++ G EAEA+F + G P + L+ + ++ +
Sbjct: 188 DRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVM 247
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSK 350
+L + G+ PD +LN + + +++ +L+ +E+ ++
Sbjct: 248 AQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTR 291
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L++ Y TAG+ V EM+ G+ P+ YN LD + +A+ + +Y+
Sbjct: 15 DTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQR 74
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M N TY ++ YG+++ + V++EM+ G + ++ Y L+ A G
Sbjct: 75 MKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGL 134
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+FE+M+ + + +PD + +++++ S G A +F+ M G EP+
Sbjct: 135 CEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYN 193
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ YG+A + L G+ P
Sbjct: 194 ILVDAYGRAGLHREAEAVFESLKRQGMAP 222
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
L+ + +GN C V ++ G+ P+ I N +L+ GRA R ++ + M G
Sbjct: 230 LLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRG 289
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
+ + TY + AYGRA Y E + + ++ +G+ V + + + A
Sbjct: 290 -TRDVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCL 348
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
EIFE+M + C PD+ T ++ CS +V + A+ M
Sbjct: 349 EIFEEMVDA-GCYPDAGTAKVLVAACSDERQVEQVTAIVRSM 389
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y + + P +TYA LLRAY A V EM+E G+ S T+YN L
Sbjct: 1 MYAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLL 60
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI-------------------CSCRGKV 265
++A E+++ MK E C+ ++ T++ MI + C+ +
Sbjct: 61 KARCAEKAVEVYQRMK-RERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANI 119
Query: 266 ----------------SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+AE +F EM +AG EP+++ +L++ Y +A +
Sbjct: 120 CTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSL 179
Query: 310 LPELGITPD 318
+ +G PD
Sbjct: 180 MQHMGCEPD 188
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A + ++ YG AG D + M+ G + ++ TYN ++ GRA +++ +
Sbjct: 258 DTIALNAMLNAYGRAGRLDDMERLLAAMERRGTR-DVGTYNVAVNAYGRAGYLERMEAAF 316
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ GL+ + T+ S + AY R + L ++ EM + G L+A C+D
Sbjct: 317 ASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVDAGCYPDAGTAKVLVAACSDE 376
Query: 227 GYTDEAFEIFEDM 239
++ I M
Sbjct: 377 RQVEQVTAIVRSM 389
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
ID + ++ ++ + + + E++ A G P + TYN LL+ + + R + +
Sbjct: 265 IDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDL 324
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++ DNG +P+ TY SL+ G+ + + +++EM +G+ L Y L+
Sbjct: 325 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQ 384
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A +++ M +S C PD T S+MI S G++ A +F M G PN
Sbjct: 385 TGKIPQASSVYKTM-TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEV 443
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V ++LI KA++ D + L ++ + TPD
Sbjct: 444 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 476
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ E++ A G P + TYN LL+ + + R + + +++ DNG +P+ TY SL+ G
Sbjct: 8 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 67
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ + + +++EM +G+ L Y L+ G +A +++ M +S C PD
Sbjct: 68 KEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM-TSHGCVPDV 126
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T S+MI S G++ A +F M G PN V ++LI KA++ D + L +
Sbjct: 127 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 186
Query: 310 LPELGITPD 318
+ + TPD
Sbjct: 187 MKKAFCTPD 195
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 9/203 (4%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++EM G+ + + Y L+ + + + Q ++YK MT +G P+ T ++++
Sbjct: 78 LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 137
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+A + +++ M+ +G+ + +Y+ L+ D A E+ MK + C PD+
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA-FCTPDT 196
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ +I G V A A F+EMLEAG +P+++ LI + KA TD +L +
Sbjct: 197 ITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQ 256
Query: 310 LPELGITPDDRFCGCLLNVMTQT 332
+ GC +++ T T
Sbjct: 257 ETTIN--------GCTIDIHTYT 271
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 112/241 (46%), Gaps = 7/241 (2%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LI+ G +VY+ M + G P+++T + ++D + +A R I
Sbjct: 89 LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 148
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+K M GL+PN Y++L+ +AR + L + +MK+ YN L+
Sbjct: 149 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCK 208
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G + A F++M + C+PD +T++ +I+ C + + ++ E G ++
Sbjct: 209 SGDVEAARAFFDEMLEA-GCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDI 267
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
T+++ K ++ ++ V + ++ G TP LLN + + +G+L E +
Sbjct: 268 HTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCK-----MGRLEEAI 322
Query: 345 E 345
+
Sbjct: 323 D 323
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ST+I AG + +++ M+A G+ PN + Y+ L+ + +A++ +
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 184
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +P+ TY L+ ++ E + + EM E G + V YN L++
Sbjct: 185 AQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKA 244
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G TD A + C D T+++++ + K+ EA A+ ++ G P +
Sbjct: 245 GNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIAT 304
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ K R ++ + L ++ + G TPD
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 336
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 38/180 (21%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S LI A D L + +MK P+ ITYN L+D + ++
Sbjct: 434 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 493
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM + G P+ TY L+ + +A
Sbjct: 494 EAARAFFDEMLEAGCKPDVYTYNILISGFCKA---------------------------- 525
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
G TD A +F+DM SS C + T+ ++I+ R ++++A F M E G
Sbjct: 526 -------GNTDAACGVFDDM-SSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
E+ +++ ++ G ++ YN LL +G +EA ++ + + C PD T++S
Sbjct: 3 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN-GCTPDVVTYTS 61
Query: 255 MI---------------------------TICSCR--------GKVSEAEAMFNEMLEAG 279
+I T+C GK+ +A +++ M G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
P++ L+++I KA R VR + G+ P++ L++ + + K
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176
>gi|297794571|ref|XP_002865170.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311005|gb|EFH41429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 468
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 119/232 (51%), Gaps = 5/232 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLIK Y D V M+ G++P++ TYN+L+ + +V ++
Sbjct: 47 DVITYNTLIKGYSRFIGIDEAYAVTRRMREAGIEPDVATYNSLISGAAKNLMLNRVLQLF 106
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR-ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM +GLSP+ +Y +L+ Y R ++GE ++ +++ G+ V YN LL
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFRLGKHGEAFRILHEDIRLAGLVPGVDTYNILLDALCK 166
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G+TD A E+F+ +KS +P+ T++ +I +C R +V M E+ +AG+ PN
Sbjct: 167 SGHTDNAIELFKHLKS--RVKPELMTYNILINGLCKSR-RVGSVNWMLRELRKAGYTPNA 223
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
T++++ Y K +R + + ++ + G T D +++ + +T + E
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLELFLKMKKEGYTFDGYANCAVVSALIKTGRAE 275
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L+ +G+ D + +++ +K+ VKP ++TYN L++ + +++R V + +E
Sbjct: 155 DTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVNWMLRE 213
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ G +PN TY ++L+ Y + + E L ++ +MK++G +++ G
Sbjct: 214 LRKAGYTPNAVTYTTMLKMYFKTKRIEKGLELFLKMKKEGYTFDGYANCAVVSALIKTGR 273
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+EA+ ++ S D ++++++ + G + + + E+ G +P+ + T
Sbjct: 274 AEEAYGCMNELVRSGTRSQDIVSYNTLLNMYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ K T + L R+ E+G+ P C CL++
Sbjct: 334 IIVNGLLKIGHTGGAEKHLARIGEMGMQPSIATCNCLID 372
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK G+ ++ N +D++ + + + +T+ + G+ P+ TY +L++ Y R
Sbjct: 6 MKFPGISTKLL--NISVDSLCKFRNLEKAETLLIDGIRLGVLPDVITYNTLIKGYSRFIG 63
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ +V R M+E G++ V YN+L++ A + ++F++M S PD W+++
Sbjct: 64 IDEAYAVTRRMREAGIEPDVATYNSLISGAAKNLMLNRVLQLFDEMLHS-GLSPDMWSYN 122
Query: 254 SMITICSCRGKVSEAEAMFNEMLE-AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL-- 310
++++ GK EA + +E + AG P + L+ K+ TD+ + L
Sbjct: 123 TLMSCYFRLGKHGEAFRILHEDIRLAGLVPGVDTYNILLDALCKSGHTDNAIELFKHLKS 182
Query: 311 ---PEL 313
PEL
Sbjct: 183 RVKPEL 188
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + TL+ Y G D L+++ EM G+KP+ I YN ++D + A R K
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EMT++G++ N TY +LR + R ++ + +++E++ +++++ NT++A
Sbjct: 625 VKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGM 684
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++F + S P T+S MIT G V EAE MF+ M AG EP+
Sbjct: 685 FQTRRVEEAKDLFASI-SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
Query: 284 LFVLTSLIQCYGKAQRTDDVVRA 306
+L +++ + + +++VRA
Sbjct: 744 SRLLNHVVR---ELLKKNEIVRA 763
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 144/308 (46%), Gaps = 20/308 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+ST+I + G+ + ++++EM G+ P+ +TY++++ + +A+ + +
Sbjct: 218 DVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFL 277
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G+ PN TY +L+ Y ++ + V++EM+ + V + L+
Sbjct: 278 RQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 337
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F+ M + + P+ ++++ M+ + +G + + +F+ ML G P+++
Sbjct: 338 GKIKEARDVFDTM-AMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 396
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
LI+ Y D + N + + G+ PD ++ + + +GK+ + +EK
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR-----IGKMDDAMEK 451
Query: 347 SNSKLG-------YVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLN 399
N + Y L++ G K A EL + I + +D+ +
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK-AKELISEIMNN------GMHLDIVFFSS 504
Query: 400 LLENACKL 407
++ N CKL
Sbjct: 505 IINNLCKL 512
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 18/307 (5%)
Query: 71 GSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G +P Y + + S LK K + N +D FS++I G
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
N+++ +G+ P + Y+ L+D + + ++ M G+ PN Y +L+
Sbjct: 519 QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNG 578
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + ++ LS++REM +KG++ S LYN ++ + G T A F +M S
Sbjct: 579 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES-GIAM 637
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T++ ++ EA +F E+ + N+ L ++I + +R ++
Sbjct: 638 NKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLF 697
Query: 308 NRLPELGITPDDRFCGCLLNVM-TQTPKEELGKLVECV---------EKSNSKLGYVVKL 357
+ G+ P C ++M T KE L + E + E + L +VV+
Sbjct: 698 ASISRSGLVP----CVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRE 753
Query: 358 LLEEQDI 364
LL++ +I
Sbjct: 754 LLKKNEI 760
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P TY L+D RA RP + ++ GL N LL+ + A+ ++ L
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166
Query: 199 SVY-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMI 256
+ E G V Y+ LL D G + +A ++ M + C PD +S++I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G V++A +F EM++ G P+ +S++ KA+ D L ++ G+
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286
Query: 317 PDD 319
P++
Sbjct: 287 PNN 289
>gi|302797282|ref|XP_002980402.1| hypothetical protein SELMODRAFT_32257 [Selaginella moellendorffii]
gi|300152018|gb|EFJ18662.1| hypothetical protein SELMODRAFT_32257 [Selaginella moellendorffii]
Length = 457
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 4/243 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ L Y AG+ D + + ++ A N+ TY ++ + R KR +
Sbjct: 32 DASSYGILANAYVQAGDLDAAVKLLRDLPA-STTANLATYLCVMMGLCRGKRSIDAIGVL 90
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + P TY L+ GR ++ +++E+ +G + Y+ ++ A
Sbjct: 91 REMQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIVCGLAKY 150
Query: 227 GYTDE-AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
GY DE A ++F M+ C P+++ ++ ++T + V E MF EM E G EPNL
Sbjct: 151 GYFDEAAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKKDGVEEMREMFLEMKEKGCEPNLV 210
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK--LVEC 343
+ I KA R DD + + + +PD+ L+N + K G+ L E
Sbjct: 211 TYCTYILGLCKAGRVDDAMVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEM 270
Query: 344 VEK 346
+EK
Sbjct: 271 LEK 273
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 148/341 (43%), Gaps = 66/341 (19%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ V EM+ V P + TY L++ +GR R + +++E+ G + ++Y+ ++
Sbjct: 87 IGVLREMQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIV-- 144
Query: 188 YGRARYG---------------------------------------EDTLSVYREMKEKG 208
G A+YG E+ ++ EMKEKG
Sbjct: 145 CGLAKYGYFDEAAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKKDGVEEMREMFLEMKEKG 204
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ ++ Y T + G D+A + ++M ++C PD+ +S +I GK+ E
Sbjct: 205 CEPNLVTYCTYILGLCKAGRVDDAMVVKKEM-IQKSCSPDNVVYSILINAFCKVGKIYEG 263
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
E + EMLE +P++ +SL+ C KA R D R R+ E G PD +L+
Sbjct: 264 EKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRYGDAYRLFRRMMEQGCKPDAVIASVMLDS 323
Query: 329 MTQTPKEELGKLVECVEK---------SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
T+ + E+ + +E V++ S + +VK + + GD ++ L ++
Sbjct: 324 FTK--RGEVAQALELVDEFVDRDLPLPSAGSINQLVKRI-----VVGDKVEDGVRLLKTM 376
Query: 380 ----SKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEV 416
S+ ++ +Y L +LC +NA + LEL L E+
Sbjct: 377 ASRGSRPLQCSYATLLRELCRR----KNAVEALELDLFQEM 413
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 4/185 (2%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K + D FS+L+ AG + ++ M G KP+ + + +LD+ + Q
Sbjct: 273 KKLQPDVVCFSSLVDCLDKAGRYGDAYRLFRRMMEQGCKPDAVIASVMLDSFTKRGEVAQ 332
Query: 162 VKTIYKEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ E D L P+ + L++ ED + + + M +G + Y TLL
Sbjct: 333 ALELVDEFVDRDLPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRPLQCSYATLL 392
Query: 221 AMCADVGYTDEAFE--IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
EA E +F++M S PD ++ ++ GK+ + +F +++
Sbjct: 393 RELCRRKNAVEALELDLFQEMIESGRI-PDVNSYEILVEALCKAGKIFQGHELFKQLISL 451
Query: 279 GFEPN 283
GF P+
Sbjct: 452 GFIPS 456
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 101/251 (40%), Gaps = 41/251 (16%)
Query: 107 DPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN + + G AG D + V +EM P+ + Y+ L++ + + ++ +
Sbjct: 206 EPNLVTYCTYILGLCKAGRVDDAMVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEK 265
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRA-RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM + L P+ ++SL+ +A RYG D ++R M E+G + + + +L
Sbjct: 266 LLAEMLEKKLQPDVVCFSSLVDCLDKAGRYG-DAYRLFRRMMEQGCKPDAVIASVMLDSF 324
Query: 224 ADVGYTDEAFEIFEDM-----------------------------------KSSENCQPD 248
G +A E+ ++ +S +P
Sbjct: 325 TKRGEVAQALELVDEFVDRDLPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRPL 384
Query: 249 SWTFSSMIT-ICSCRGKVSEAEA-MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
++++++ +C + V E +F EM+E+G P++ L++ KA +
Sbjct: 385 QCSYATLLRELCRRKNAVEALELDLFQEMIESGRIPDVNSYEILVEALCKAGKIFQGHEL 444
Query: 307 LNRLPELGITP 317
+L LG P
Sbjct: 445 FKQLISLGFIP 455
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 184 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 243
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 244 KANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 303
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 304 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 358
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +V+ +++ LG PD +LN
Sbjct: 359 VKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLN 405
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 119 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 238
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 239 TLEHEKANNLIQEMQ-SRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 297
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 298 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 331
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 15 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIF 74
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 75 SRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN 134
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 135 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 193
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 194 YNTLLRVYGDAE 205
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 50 DLVLYSNLIELSRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLI 109
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 110 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 169
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 170 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 228
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 229 YNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 288
Query: 312 ELGITPD 318
G+ D
Sbjct: 289 SSGVEID 295
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 62
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 63 KLCDYSKAISIFSRLKXS-GFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 121
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 122 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 168
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 58/129 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 313 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 372
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G S
Sbjct: 373 SKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 432
Query: 214 TLYNTLLAM 222
++ +L++
Sbjct: 433 QVHFQMLSL 441
>gi|412985631|emb|CCO19077.1| pentatricopeptide repeat-containing protein [Bathycoccus prasinos]
Length = 1001
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 10/213 (4%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
A++TLIK G +GN L V+E M ++ GV+PN T + LL+ +GR + + +Y+
Sbjct: 231 AYTTLIKWVGKSGNCSKALEVFECMGSVHGVEPNTYTCSALLNALGRHRMGQEAWEVYEM 290
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC--ADV 226
M + + N TY +L+ A+ ++R + VY E+KE G+Q+ Y +LA C +
Sbjct: 291 MKEKNIECNIFTYTALITAFQKSREQDRVYQVYDELKESGIQIDSITYAAMLAACEKGET 350
Query: 227 GY---TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G T++A +F DMK S P+ + ++T C G+V + + EM++ +
Sbjct: 351 GTGECTEKALRVFADMKKS-GVDPNQQCYQFLMTCCEKGGRVDKCFELHGEMVKHKHVVD 409
Query: 284 LFVLTSLIQCYGKA---QRTDDVVRALNRLPEL 313
+ SLI GK Q+ +V ++L E+
Sbjct: 410 KNIYQSLIAVCGKKGMWQKAIEVYKSLKTKKEV 442
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
T V R +KE + Y TL+ G +A E+FE M S +P+++T S+++
Sbjct: 213 TGEVKRALKESIFKPLAPAYTTLIKWVGKSGNCSKALEVFECMGSVHGVEPNTYTCSALL 272
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
EA ++ M E E N+F T+LI + K++ D V + + L E GI
Sbjct: 273 NALGRHRMGQEAWEVYEMMKEKNIECNIFTYTALITAFQKSREQDRVYQVYDELKESGIQ 332
Query: 317 PDDRFCGCLLNVMTQTPKEELGKLVECVEKS 347
D +L K E G EC EK+
Sbjct: 333 IDSITYAAML---AACEKGETG-TGECTEKA 359
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 113/212 (53%), Gaps = 4/212 (1%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P ++ ++ L G FD +V + MK+ GV+ + T++ L+ RA + +
Sbjct: 178 PEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFN 237
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M D G +P+ ++ ++ + + R + S + +K + + V +Y +L+ G
Sbjct: 238 RMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVYTSLVHGWCRAG 296
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+A E+F DMK + +P+ +T+S +I ++C C G+++ A +F+EM++AG +PN
Sbjct: 297 DISKAEEVFSDMKMA-GIKPNVYTYSIVIDSLCRC-GQITRAHDVFSEMIDAGCDPNAVT 354
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL++ + KA RT+ V++ N++ LG D
Sbjct: 355 FNSLMRVHVKAGRTEKVLKVYNQMKRLGCPAD 386
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 5/219 (2%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K R +P+ +++L+ + AG+ V+ +MK G+KPN+ TY+ ++D++ R +
Sbjct: 275 KHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQIT 334
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ EM D G PN T+ SL+R + +A E L VY +MK G YN ++
Sbjct: 335 RAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFII 394
Query: 221 -AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ C D +EA +I ++ + P++ TF+ + + V+ A M+ M E
Sbjct: 395 ESHCRDENL-EEAAKIL-NLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELN 452
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+PN L++ + +++ TD V++ + E + P+
Sbjct: 453 CQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPN 491
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-------------------------- 138
DPNA F++L++++ AG + L VY +MK +G
Sbjct: 349 DPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAK 408
Query: 139 ---------VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V PN T+N + + + +Y M + PN TY L+R +
Sbjct: 409 ILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFA 468
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+R + L + +EM E ++ +V Y L++M D+ + + A+++ +M + +P+
Sbjct: 469 ESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNL 528
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ +++ + G++ + E + ++M+ GF
Sbjct: 529 SVYETVLELLRKAGQLKKHEELVDKMVARGF 559
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 146 YNNLLDTMGRAKR---PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
YN +LD G+ ++ W V + M G+ +T+++L+R Y RA + + +
Sbjct: 181 YNEMLDLAGKLRQFDLAWHVIDL---MKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFN 237
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
M++ G + ++ +++ +EA F+ +K +PD ++S++
Sbjct: 238 RMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLK--HRFEPDVVVYTSLVHGWCRA 295
Query: 263 GKVSEAEAMFNEMLEAGFEPNLF----VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +S+AE +F++M AG +PN++ V+ SL +C G+ R DV + + + G P+
Sbjct: 296 GDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRC-GQITRAHDV---FSEMIDAGCDPN 351
Query: 319 DRFCGCLLNVMTQTPKEE 336
L+ V + + E
Sbjct: 352 AVTFNSLMRVHVKAGRTE 369
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 116/225 (51%), Gaps = 6/225 (2%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+ + R ++ R P+ ++ LI LYG A L V+ EM++ KPN+ T+ L
Sbjct: 293 QKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTAL 352
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + + I++++ + GL P+ Y +L+ AY RA + ++ M+ G
Sbjct: 353 VNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 412
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ YN ++ G ++A +FE MK P + +++ S GKV++ E
Sbjct: 413 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRL-GITPTMKSHMLLLSAYSRAGKVAKCE 471
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKA---QRTDDVVRALNRLP 311
+ N+M ++G +P+ FVL S++ YG+ ++ ++V+ A+ + P
Sbjct: 472 EIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP 516
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
S L EK+ A K+ P+A ++ I G+ + ++E MK +P+ T
Sbjct: 254 SGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTAT 313
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L++ G+A + + ++ EM PN T+ +L+ A+ R E ++ +++
Sbjct: 314 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 373
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
E G++ V YN L+ + G+ A EIF M+ C+PD +++ M+ G
Sbjct: 374 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLH 432
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+A+A+F M G P + L+ Y +A + +N++ + GI PD +
Sbjct: 433 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSM 492
Query: 326 LNVMTQTPK-EELGKLVECVEKS 347
LN+ + + E++ +++ +EK
Sbjct: 493 LNLYGRLGQFEKMEEVLTAMEKG 515
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L+K Y T+G + V+ EM+ G P+ + YN +D + + + I++
Sbjct: 242 DTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFER 301
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + P+ TY L+ YG+A L V+ EM+ + + ++ + L+ A G
Sbjct: 302 MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGL 361
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A EIFE ++ + +PD + +++++ S G A +F+ M G EP+
Sbjct: 362 CEKAEEIFEQLQEA-GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYN 420
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
++ YG+A +D + LGITP + LL+ ++ GK+ +C E N
Sbjct: 421 IMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA-----GKVAKCEEIVN 475
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 7/222 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R++K + + F+ L+ + G + ++E+++ G++P++ YN L++ RA P
Sbjct: 338 RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFP 397
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I+ M G P+ +Y ++ AYGRA ED +V+ MK G+ ++ + L
Sbjct: 398 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLL 457
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L+ + G + EI M S +PD++ +SM+ + G+ + E + M +
Sbjct: 458 LSAYSRAGKVAKCEEIVNQMHKS-GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP 516
Query: 280 FEPNLFVLTSLIQCYGKA---QRTDDVVRALNRLPELGITPD 318
+ ++ LI YG+A R +++ R+ LP + PD
Sbjct: 517 YPADISTYNILINIYGRAGFFARMEELFRS---LPARNLIPD 555
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++I YN L+D G+ + ++ Y E+ + P +TYA LL+AY + E +V
Sbjct: 204 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 263
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ EM++ G S +YN + G T +A EIFE MK + CQP + T++ +I +
Sbjct: 264 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK-RDRCQPSTATYTMLINLYG 322
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
K A +F+EM +PN+ T+L+ + + + +L E G+ PD
Sbjct: 323 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 380
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ ++ YG AG + V+E MK +G+ P M ++ LL RA + + + I
Sbjct: 415 DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIV 474
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +G+ P+ S+L YGR E V M++ ++ YN L+ +
Sbjct: 475 NQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRA 534
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN--- 283
G+ E+F + + N PD T++S I S R + + +F EM++AG P+
Sbjct: 535 GFFARMEELFRSL-PARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGT 593
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNR 309
VL S + Q V+R +++
Sbjct: 594 AKVLLSACSNGDQIQEVTTVIRTMHK 619
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 167 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 226
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G ++ L+ T++
Sbjct: 227 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMI 286
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 287 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 341
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 342 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 388
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 102 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 161
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 162 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 221
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 222 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQI 280
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 281 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 314
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+ +
Sbjct: 2 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLK 61
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G +P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 62 RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFL 121
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+ +L
Sbjct: 122 EALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180
Query: 291 IQCYGKAQ 298
++ YG A+
Sbjct: 181 LRVYGDAE 188
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 33 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 92
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN +Y++LL Y + + LSV+ EM+E L +T N ++ + +
Sbjct: 93 GEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 152
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F M+ +P+ ++++++ + EA +F M E N+
Sbjct: 153 GMAKEADKLFWGMRKM-GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 211
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S++ YGK + + + GI P+
Sbjct: 212 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 243
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
TY++L+ +G+ + LS ++M++ + + LY+ L+ + + +A IF +
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
K S PD +++MI + EA ++ EM AG PN ++L+ Y + ++
Sbjct: 61 KRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKK 119
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ + + + E+ D C +++V Q
Sbjct: 120 FLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 151
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 296 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 355
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G
Sbjct: 356 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 410
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 6/292 (2%)
Query: 99 ARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
AR +K PN ++ LI G + + +Y +M G+ PN +TYN L++ +
Sbjct: 369 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 428
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R I+ M +G N TY +++ E + ++ +M + G +V Y
Sbjct: 429 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 488
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NTL+ G + A + + MK + C+PD WT++ +++ S GK+ A F EM+
Sbjct: 489 NTLINGYLTKGNVNNAARLLDLMKEN-GCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
E G PN T+LI + K + D + L R+ E+G P+ ++N ++ KE
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS---KEN 604
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYC 388
E + ++ G + ++ I+G + T+ I D++K C
Sbjct: 605 RFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 656
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ + G + ++EM G+ PN ++Y L+D + + ++
Sbjct: 519 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLL 578
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + G +PN +Y +++ + + + +M E+G+ +V Y TL+
Sbjct: 579 ERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRN 638
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T AF+IF DM+ + C P+ +T+SS+I GK EAE + EM G P+
Sbjct: 639 GRTQFAFKIFHDMEKRK-CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVT 697
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
TSLI + R D L R+ ++G P+ R LL
Sbjct: 698 FTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLL 737
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+G N+Y++M G++P+++T+N L++ + + + + + I ++ LSP+ TY SL
Sbjct: 222 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 281
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ + R R + V+ M ++G + Y+TL+ + G DEA ++ E+M +
Sbjct: 282 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM-IEKG 340
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+P +T++ IT EA + M + G PN+ T+LI + + + +
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 400
Query: 305 RALNRLPELGITPDDRFCGCLLN 327
+++ + G+ P+ L+N
Sbjct: 401 GLYHKMLKEGLVPNTVTYNALIN 423
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
NF+ N+ M IG +P + TY+ L+ + R R ++ + + K+M + G P+ Y
Sbjct: 769 NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY 828
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
SLL A+ + + L ++ ++ KG QL +++Y L+ G +EA +F++M
Sbjct: 829 SLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK 888
Query: 243 E-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
E N WT ++ G++ + + M F PN+
Sbjct: 889 EWNADEIVWTV--LVDGLLKEGELDLCMKLLHIMESKNFTPNI 929
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 38/254 (14%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
++ + P+ F+ +LI + N D V++ M G PN +TY+ L++ + R
Sbjct: 268 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 327
Query: 161 QVKTIYKEMTDNGLS-----------------------------------PNWNTYASLL 185
+ + +EM + G+ PN TY +L+
Sbjct: 328 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 387
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
R E + +Y +M ++G+ + YN L+ G A +IF M+
Sbjct: 388 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGS 446
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
++ T++ +I G + +A +F +ML+ G P + +LI Y ++ R
Sbjct: 447 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 506
Query: 306 ALNRLPELGITPDD 319
L+ + E G PD+
Sbjct: 507 LLDLMKENGCEPDE 520
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 32/224 (14%)
Query: 102 EKWRIDPNAFSTLIKLYGTA--GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EK + PN ++ +YG G D + +EM+ G+ P+ +T+ +L+D R
Sbjct: 652 EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRI 711
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + M D G PN+ TY+ LL KG+Q L
Sbjct: 712 DHAFLLLRRMVDVGCKPNYRTYSVLL---------------------KGLQKECLLLEEK 750
Query: 220 LAMCADVGYT------DEAFEIFEDM---KSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+A+ + Y+ D FEI ++ S C+P T+S++++ +G+ EAE
Sbjct: 751 VAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 810
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+ +M E GF P+ + SL+ + K D ++ + + G
Sbjct: 811 LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 854
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI + G + ++ + P++ TY +L+ R + ++ M
Sbjct: 243 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 302
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G PN TY++L+ ++ L + EM EKG++ +V Y + + + +
Sbjct: 303 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 362
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E+ MK C+P+ T++++I+ S GK+ A ++++ML+ G PN +L
Sbjct: 363 EAIELVARMK-KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 421
Query: 291 IQ--CYG 295
I C G
Sbjct: 422 INELCVG 428
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+V E++ G + + +LL + E ++Y++M G+Q S+ +NTL+
Sbjct: 188 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 247
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAG 279
+ + G EA E+ + PD +T++S+I + CR + + A +F+ M++ G
Sbjct: 248 NILSKKGKVREA-ELILSQIFQYDLSPDVFTYTSLI-LGHCRNRNLDLAFGVFDRMVKEG 305
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+PN ++LI R D+ + L + E GI P
Sbjct: 306 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 343
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K R +P+ +++L+ + AGN V+ EMK G++PN+ TY+ ++D + R+ +
Sbjct: 243 KDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQIT 302
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ EM D G PN T+ +L+R + +A E L VY +MK G YN L+
Sbjct: 303 RAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLI 362
Query: 221 -AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ C D +EA +I +K + C ++ +F+ + S G V+ A MF +M +
Sbjct: 363 ESHCRD-DNLEEAVKILNSVK--KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLK 419
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
PN L++ + + TD V++ + E I P+ FCG
Sbjct: 420 CRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCG 471
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DPNA F+ L++++ AG + L VY +MK +G P+ ITYN L+++ R +
Sbjct: 317 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVK 376
Query: 165 I----------------------------------YKEMTDNGLSPNWNTYASLLRAYGR 190
I + +M D PN TY L+R +
Sbjct: 377 ILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFAD 436
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ + L + +EM E ++ + Y L++ +G+ + A+ F++M + +P
Sbjct: 437 KKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLP 496
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ ++ G++ + E + +M+ GF
Sbjct: 497 VYEMVLQQLRKAGQLKKHEELVEKMVNRGF 526
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 21/246 (8%)
Query: 146 YNNLLDTMGRAKR---PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
Y ++D G+ ++ WQ+ + K T N P T+ L+R Y +A + + +
Sbjct: 149 YMEMIDLAGKVRQFDLAWQLIDLMK--TRNVEIP-VETFTILVRRYVKAGLAAEAVHAFN 205
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
M++ G + ++ +++ + EA F+ +K + +PD ++S++
Sbjct: 206 RMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLK--DRFEPDVVVYTSLVHGWCRA 263
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDD 319
G +SEAE +F EM AG +PN++ + +I G+ R DV + + ++G P+
Sbjct: 264 GNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDV---FSEMIDVGCDPNA 320
Query: 320 RFCGCLLNVMTQTPKEELGKLVECVEKSNSKLG----YVVKLLLEEQDIEGDFKKEATEL 375
L+ V + + E K+++ V +LG + L E D +EA ++
Sbjct: 321 ITFNNLMRVHVKAGRTE--KVLQ-VYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 377
Query: 376 FNSISK 381
NS+ K
Sbjct: 378 LNSVKK 383
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ ++F+ + G+ + ++ +MK + +PN +TYN L+ K V +
Sbjct: 387 LNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKL 446
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLLAMCA 224
KEM +N + PN NTY L+ + + + S ++EM +EK ++ S+ +Y +L
Sbjct: 447 RKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLR 506
Query: 225 DVGYTDEAFEIFEDM 239
G + E+ E M
Sbjct: 507 KAGQLKKHEELVEKM 521
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PNA ++TL+ + G + + E M+ G+ P++ YN+L+ +AKR + +
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T EM + L PN +TY + + Y +A E + EM G+ +V +Y L+
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 575
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EAF +F + S Q D T+S +I S GK+ EA +F+E+ E G PN
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 634
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F SLI K D + L + GI PD
Sbjct: 635 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 669
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNAF+ +LI GN D + EEM G+ P+++TYN L+D + +A + K +
Sbjct: 633 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL 692
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ GL+PN TYA+++ Y +++ + EM +G+ +YN +L C
Sbjct: 693 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK 752
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A ++F++M E + +F+++I GK+ EA + EM+E F PN
Sbjct: 753 EEKFEKALDLFQEM--LEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 810
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
TSLI KA + R + E + P
Sbjct: 811 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP 842
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P ++ LI + G+ + + +EM A G++ N+I +N LL+ + +A + + I
Sbjct: 319 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 378
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + G+ P+ TY+ L+ + R + + EMK++ + +V Y+ ++
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 438
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G I +M + +P++ +++++T + G+V E+ + M E G P++F
Sbjct: 439 GNLQGTNAILREMVMN-GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 497
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
SLI + KA+R ++ L + E + P+ G ++ ++ + E+
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 549
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 10/322 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+ + N + +EMK + P ++TY+ +++ + R I
Sbjct: 389 DSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAIL 448
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM NGL PN Y +L+ A+ + E++ + M+E+G+ V YN+L+
Sbjct: 449 REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKA 508
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA +M +P++ T+ + I S G++ A+ FNEML G PN+ +
Sbjct: 509 KRMEEARTYLMEM-LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 567
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVECV 344
T+LI+ + K + + + D + L++ +++ K E G E
Sbjct: 568 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 627
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENA 404
EK + L+ +G+ K + L K + D+ L++
Sbjct: 628 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP-------DIVTYNILIDGL 680
Query: 405 CKLLELGLTLEVYTDIQSRSPT 426
CK E+ ++ DI+ R T
Sbjct: 681 CKAGEIERAKNLFDDIEGRGLT 702
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 110/287 (38%), Gaps = 74/287 (25%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA---------- 156
D ++ +I + GN V EM G PN++TYN ++ + RA
Sbjct: 214 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELK 273
Query: 157 -------------------------KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
KR + K + EM D GL P TY +L+ + R
Sbjct: 274 RSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQ 333
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
E + EM G++ ++ ++NTLL G ++A EI ++M + +PDS T
Sbjct: 334 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM-EKGVEPDSQT 392
Query: 252 FSSMIT------------------------------------ICSCRGKVSEAEAMFNEM 275
+S +I +C C G + A+ EM
Sbjct: 393 YSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC-GNLQGTNAILREM 451
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
+ G +PN V T+L+ + K R ++ L R+ E GI P D FC
Sbjct: 452 VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP-DVFC 497
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 114/252 (45%), Gaps = 2/252 (0%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A +++E ++Y + R + + + I Y AG + + EM + GV PN+
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 566
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
Y L++ + + ++++ + + + TY+ L+ R + ++ E+
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+EKG+ + YN+L++ G D+A ++ E+M + PD T++ +I G+
Sbjct: 627 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGE 685
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ A+ +F+++ G PN +++ Y K++ + L + G+ PD
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745
Query: 325 LLNVMTQTPKEE 336
+LN + K E
Sbjct: 746 ILNFCCKEEKFE 757
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V++ M A V P++ TY N++ + K + EM + G SPN TY ++
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPD 248
RAR ++ + + R M +KG+ + Y+ L+ C + + + E + +P+
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG--LKPE 319
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T++++I +G + +A + +EM+ G E NL + +L+ KA + + + +
Sbjct: 320 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379
Query: 309 RLPELGITPDDR 320
+ E G+ PD +
Sbjct: 380 EMMEKGVEPDSQ 391
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 4/251 (1%)
Query: 71 GSSPKSYIWVNPKSPRASKLK-EKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGC 127
G P + ++ + A + + E+S R + I P+ F ++LI + A +
Sbjct: 455 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 514
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
EM ++PN TY +D +A + EM G+ PN Y +L+
Sbjct: 515 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 574
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ + + SV+R + + + V Y+ L+ + G EAF IF +++ + P
Sbjct: 575 HCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ-EKGLLP 633
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+++T++S+I+ +G V +A + EM G P++ LI KA +
Sbjct: 634 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 693
Query: 308 NRLPELGITPD 318
+ + G+TP+
Sbjct: 694 DDIEGRGLTPN 704
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 6/278 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ F L+ Y G +NV+ K +P++++ N+LL + + + +
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M + + P+ TY +++ A+ + +D V EM EKG ++ YN ++
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA E+ M + PD +T+ +I + EA+ M EM++ G +P
Sbjct: 263 ARLLDEAIELKRSM-VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE--LGKLVEC 343
+LI + + + R + + GI + LLN + + K E L + E
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+EK LL+E G A EL + + K
Sbjct: 382 MEKGVEPDSQTYSLLIEGH-CRGQNMARAFELLDEMKK 418
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 36/205 (17%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+F+TLI+ Y +G ++ EEM PN +TY +L+D +A + K ++ EM
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + P TY SLL Y + +++ EM KG+
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI-------------------- 875
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+PD T+ MI G V EA + +E+L G ++ +
Sbjct: 876 ----------------EPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDA 919
Query: 290 LIQCYGKAQRTDDVVRALNRLPELG 314
LIQ K + +V++ LN + E G
Sbjct: 920 LIQALCKKEEFFEVLKLLNEIGESG 944
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
ID + ++ ++ + + E++ A G P + TYN LL+ + + R + +
Sbjct: 163 IDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDL 222
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++ DNG +P+ TY SL+ G+ + + +++EM +G+ L Y L+
Sbjct: 223 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQ 282
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A +++ M +S+ C PD T S+MI G++ A +F M G PN
Sbjct: 283 AGKIPQASSVYKTM-TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEV 341
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V ++LI KA++ D + L ++ + TPD
Sbjct: 342 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 374
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 13/283 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LI+ AG +VY+ M + G P+++T + ++D + +A R I
Sbjct: 268 LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRI 327
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+K M GL+PN Y++L+ +AR + L + +MK+ YN L+
Sbjct: 328 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 387
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A F++M + C+PD +T++ +++ G A +F++M + PN+
Sbjct: 388 SGDVEAARAFFDEMLEA-GCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVV 446
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV---- 341
+LI K ++ + E G PD L++ + ++ K E G ++
Sbjct: 447 TYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 506
Query: 342 --ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
V S ++ + L + + EA LFN+I K+
Sbjct: 507 ERSGVANSQTRTRLIFHL------CKANRVDEAVSLFNAIRKE 543
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++EM G+ + + Y L+ + +A + Q ++YK MT G P+ T ++++
Sbjct: 257 LFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLC 316
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+A + +++ M+ +G+ + +Y+ L+ D A E+ MK + C PD+
Sbjct: 317 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA-FCTPDT 375
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ +I G V A A F+EMLEAG +P+++ L+ + KA TD +
Sbjct: 376 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDD 435
Query: 310 LPELGITPD 318
+ +P+
Sbjct: 436 MSSSHCSPN 444
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 4/216 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S LI A D L + +MK P+ ITYN L+D + ++
Sbjct: 332 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 391
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM + G P+ TY L+ + +A + V+ +M +V Y TL
Sbjct: 392 EAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTL 451
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++ +A F+ MK C PDS+ +SS++ GK+ +F+EM +G
Sbjct: 452 ISGLCKRRQLTKASLYFQHMK-ERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 510
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
N T LI KA R D+ V N + + G+
Sbjct: 511 V-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI +G+ + ++EM G KP++ TYN L+ +A ++
Sbjct: 374 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVF 433
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M+ + SPN TY +L+ + R ++ MKE+G +Y++L+
Sbjct: 434 DDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKS 493
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + +F++M+ S +S T + +I +V EA ++FN + + G P+ +
Sbjct: 494 GKLEGGCMLFDEMERSG--VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYA 550
Query: 287 LTSLIQCYGKAQRTDDVVR 305
S+I K+ + + R
Sbjct: 551 YNSIISTLIKSAKVNPCTR 569
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 5/250 (2%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK+ + R E P +++TLI Y G + + + M+ GV+P+ +T+N L
Sbjct: 331 EKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTL 390
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + + I+ EM N + PN TY +L+ Y + E ++ EM G+
Sbjct: 391 INGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGI 450
Query: 210 QLSVTLYNTL-LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ + YN L L +C + G T +A + +++ EN P+S TFS++IT R A
Sbjct: 451 KADILTYNALILGLCME-GRTKKAAYLVKEL-DRENLVPNSSTFSALITGQCVRKNSERA 508
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
++ M+ +G PN LI + K + D V + + E I PD L
Sbjct: 509 FQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRG 568
Query: 329 MTQTPKEELG 338
+ + KEEL
Sbjct: 569 LWLSGKEELA 578
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 141/363 (38%), Gaps = 22/363 (6%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P F +L K Y ++V+ +MK G P + + N + +R T Y+
Sbjct: 244 PCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYR 303
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM +SPN T ++ A+ + E + V++ M+ G ++T YNTL+A + G
Sbjct: 304 EMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKG 363
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+ ++ + + +PD TF+++I GK+ EA +F+EM PN
Sbjct: 364 LLNSGMKL-KILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITY 422
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKS 347
+LI Y + ++ R + + GI D L+ L C+E
Sbjct: 423 NTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALI-------------LGLCMEGR 469
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAY--------CNCLIDLCVNLN 399
K Y+VK L E + A + K+ ++A+ C +
Sbjct: 470 TKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKM 529
Query: 400 LLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGE 459
L+ CK + +EV ++ RS S L L G L+ L K +E
Sbjct: 530 LISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKH 589
Query: 460 EFP 462
P
Sbjct: 590 LMP 592
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 112/210 (53%), Gaps = 6/210 (2%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
+L KS+ + R+ + PN F+ LI Y AG+ + +++Y+EM+ + + N++TY
Sbjct: 180 QLALKSFHSMKRDA---LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
L+D + + + +Y M ++ + PN Y +++ + + ++ + +M
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+GM+L +T Y +++ G EA EI EDM+ S+ PD F++M+ G++
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD-LVPDMVIFTTMMNAYFKSGRMK 355
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
A M+++++E GFEP++ L+++I K
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 147/318 (46%), Gaps = 14/318 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +ST I + +G L + MK + PN++T+ L+D +A ++
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
YKEM +S N TY +L+ + + + +Y M E ++ + +Y T++
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +D A + M ++ + D + +I+ GK+ EA + +M ++ P++
Sbjct: 281 RGDSDNAMKFLAKML-NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ T+++ Y K+ R V ++L E G PD +++ + + + + C+E
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDV----KKAYCNCLIDLCVNLNLL 401
K+N + Y V L++ EGDF E LF+ IS+ K Y + + LC NL+
Sbjct: 400 KANDVM-YTV--LIDALCKEGDF-IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455
Query: 402 EN---ACKLLELGLTLEV 416
+ ++++ GL L++
Sbjct: 456 DAFKLKTRMVQEGLLLDL 473
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 120/278 (43%), Gaps = 39/278 (14%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD----------------- 151
++F++++ G ++ M G +P++I+YN+L+D
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 152 ---TMGRAKRPWQVK-----------------TIYKEMTDNGLSPNWNTYASLLRAYGRA 191
+ G +P V +Y + SPN TY++ + + ++
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ L + MK + +V + L+ G + A ++++M+ + T
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR-MSLNVVT 235
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I +G++ AE M++ M+E EPN V T++I + + +D+ ++ L ++
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 312 ELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
G+ D G +++ + K +E ++VE +EKS+
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 34/224 (15%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT- 145
KLKE + + EK + P+ F+T++ Y +G +N+Y ++ G +P+++
Sbjct: 318 KLKEAT-EIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 146 -----------------------------YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSP 176
Y L+D + + +V+ ++ ++++ GL P
Sbjct: 377 STMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 177 NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF 236
+ Y S + + D + M ++G+ L + Y TL+ A G EA ++F
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
++M +S PDS F +I G ++ A + +M G
Sbjct: 497 DEMLNS-GISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 114/228 (50%), Gaps = 7/228 (3%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
K I PN S TL+++YG A F ++++ M++ V+ N++TYN +++ G+
Sbjct: 346 RKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEH 405
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +EM G+ PN TY++++ + +A + ++++++ G+++ LY T+
Sbjct: 406 EKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTM 465
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G A + ++K +PD+ + I I + G++ EA +F + +A
Sbjct: 466 IVAYERTGLVAHAKRLLHELK-----RPDNIPRDTAIAILARAGRIEEATWVFRQAFDAR 520
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV ++ E+G PD +LN
Sbjct: 521 EVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLN 568
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S LI L ++ ++++ +KA + P++I YN++++ G+AK + + + +EM
Sbjct: 217 YSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMR 276
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK----------------------- 207
DN + P+ +Y++LL Y + + LS++ EM E
Sbjct: 277 DNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPK 336
Query: 208 ------------GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
G+Q +V YNTLL + + EA +F M+ S++ Q + T+++M
Sbjct: 337 EADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQ-SKDVQQNVVTYNTM 395
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I I + +A + EM + G EPN +++I + KA + D +L G+
Sbjct: 396 INIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGV 455
Query: 316 TPDD 319
D+
Sbjct: 456 RIDE 459
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 117/244 (47%), Gaps = 3/244 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L ++M+ V +++ Y+NL+D + + +I+
Sbjct: 178 DRYTYSTLITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIF 237
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + ++P+ Y S++ +G+A+ + + +EM++ +Q Y+TLLA+ D
Sbjct: 238 SRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDN 297
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M ++ C D T + MI + EA+ +F M + G +PN+
Sbjct: 298 QKFVEALSLFSEMNEAK-CPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVIS 356
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+L++ YG+A + + + + + ++N+ +T + E K +++
Sbjct: 357 YNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHE--KATNLIQE 414
Query: 347 SNSK 350
N +
Sbjct: 415 MNKR 418
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P++ YN LL + RAK+ ++ EM GLSP+ TY++L+ +G+ + +L
Sbjct: 141 RPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLF 200
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
++M++ + + LY+ L+ + + +A IF +K+S PD ++SMI +
Sbjct: 201 WLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKAS-TITPDLIAYNSMINVF 259
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
EA + EM + +P+ ++L+ Y Q+ + + + + E D
Sbjct: 260 GKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDL 319
Query: 320 RFCGCLLNVMTQ--TPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFN 377
C +++V Q PKE +L + K + + L E D EA LF
Sbjct: 320 TTCNIMIDVYGQLHMPKEA-DRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFR 378
Query: 378 SI-SKDVKK 385
+ SKDV++
Sbjct: 379 LMQSKDVQQ 387
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 2/215 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+ D ++ LIK G D L ++ +M KP++ITY L+D + + K+
Sbjct: 549 KADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLC 608
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I+ M N ++P+ Y L+ + R + E L ++ + E+G + V +NT++
Sbjct: 609 IFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYC 668
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ D+A ++F M +SE +P++ TF+ +I G++ +A MF++MLE G EPNL
Sbjct: 669 NFKRLDDAVQLFAKM-TSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNL 727
Query: 285 FVLTSLIQCYGKAQ-RTDDVVRALNRLPELGITPD 318
+ LI Y K+Q + ++ N + E I P+
Sbjct: 728 VTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPN 762
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 40/257 (15%)
Query: 101 NEKWRIDPN----AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
N RI P FSTLI Y GN D +++ M GV P++I Y+ L+D + +A
Sbjct: 296 NMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKA 355
Query: 157 KR-----------------------------------PWQVKTIYKEMTDNGLSPNWNTY 181
R +V IYK M + G+SPN +
Sbjct: 356 GRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSC 415
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ L++ + + + ++ ++ + G + S+ Y+ L+A G + F ++EDM
Sbjct: 416 SILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM-I 474
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ C+PD+ +S +I +G V +A F + + G PN+F L +L+ + + +
Sbjct: 475 KKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIV 534
Query: 302 DVVRALNRLPELGITPD 318
++ + L I D
Sbjct: 535 GAMKVYYLMGMLNIKAD 551
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+ TL+ + G + VY M + +K + +TY L+ + R +
Sbjct: 513 LSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEAL 572
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ +M P+ TY +L+ + + L ++ M + + + +YN L+ M
Sbjct: 573 MLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMH 632
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEP 282
+ G+ + A +F + +PD +TF++MI C C K + +A +F +M P
Sbjct: 633 SREGHLEAALGLFVHV-VERGPKPDVFTFNTMIC-CYCNFKRLDDAVQLFAKMTSEQLRP 690
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
N T LI + + R DD + +++ E G P+ CL++
Sbjct: 691 NAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIH 735
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 15/232 (6%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K R +P+ +S LI G L + + G+ PN+ T N LLD+ R K
Sbjct: 475 KKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIV 534
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNT 218
+Y M + + TY L++ G A++G ++ L ++ +M +K + V Y T
Sbjct: 535 GAMKVYYLMGMLNIKADTVTYTILIK--GAAQFGRVDEALMLFFQMLKKDFKPDVITYCT 592
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ + + IF D PD ++ +I + S G + A +F ++E
Sbjct: 593 LIDGLCKLKKSSAGLCIF-DFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVER 651
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
G +P++F ++I CY +R DD V+ ++ + P+ D FC
Sbjct: 652 GPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFC 703
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/285 (18%), Positives = 118/285 (41%), Gaps = 36/285 (12%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A ++ ++D FS+ + Y G+ + +Y+ M G+ PN+++ + L+ + R
Sbjct: 368 ALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGR 427
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ ++ G P+ TY++L+ + ++ D +Y +M +K + +Y+
Sbjct: 428 ILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSV 487
Query: 219 LLAMCADVGYTDEAFEIFED----------------------------------MKSSEN 244
L+ G +A F + N
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN 547
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+ D+ T++ +I + G+V EA +F +ML+ F+P++ +LI K +++ +
Sbjct: 548 IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGL 607
Query: 305 RALNRLPELGITPDDRFCGCLLNVMTQTPKEE--LGKLVECVEKS 347
+ + + + PD L+N+ ++ E LG V VE+
Sbjct: 608 CIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERG 652
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
+ +E+ R + F+ LI + G D + ++ +M G +PN++TY+ L+ ++
Sbjct: 681 AKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKS 740
Query: 157 KRPWQVKT-IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ + +Y EM +N ++PN +Y+ L+ + ++ +R +K + V
Sbjct: 741 QSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIA 800
Query: 216 YNTLLAMCADVGYTDEAFEIFEDM 239
Y L+ VG EA ++++M
Sbjct: 801 YTILIRGYCKVGRLTEAMMLYDNM 824
>gi|410110109|gb|AFV61134.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
diamantinensis]
Length = 363
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 119 KMGIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 178
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 179 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMI 238
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 239 VAYERAGLIAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 293
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 294 VKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLN 340
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L V+ EM+ I ++ T N ++D G+ + +
Sbjct: 54 PNTTSYSTLLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 113
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A +++ ++R M+ K ++ +V YN+++ +
Sbjct: 114 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGK 173
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ G E +
Sbjct: 174 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQI 232
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 233 LFQTMIVAYERAGLIAHAKRLLHELKRPDNIPRD 266
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 36/231 (15%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ ++++ +K G P+++ YN +++ G+AK + +++ EM G+ PN +Y+
Sbjct: 1 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 60
Query: 183 SLLRAYGRARYGEDTLSVYREMKE-----------------------------------K 207
+LL Y + + L V+ EM+E
Sbjct: 61 TLLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 120
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++ +V YNTLL + D E+ +F M+ +N + + T++SM+ I + +
Sbjct: 121 GIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEK 179
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A + EM G EPN +++I +GK + D +L G+ D
Sbjct: 180 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEID 230
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 248 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 307
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E G
Sbjct: 308 SKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 362
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+P +++TL+++YG A F ++++ M+ ++ N++TYN ++ G++
Sbjct: 358 KMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHE 417
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ + +A + ++++++ G+++ LY T++
Sbjct: 418 KATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMI 477
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + ITI + G++ EA +F + +AG
Sbjct: 478 VAYERAGLVAHAKRLLHELK-----RPDNIPRETAITILAGAGRIEEATWVFRQAFDAGE 532
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + + ++ +V+ +++ G PD +LN
Sbjct: 533 VKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLN 579
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 105/204 (51%), Gaps = 1/204 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y G + L+V+ EM + ++ T N ++D G+ + ++
Sbjct: 294 DTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLF 353
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ P +Y +LLR YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 354 WSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKS 413
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M+ + +P++ T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 414 LEHEKATNLVQEMQ-NRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVL 472
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
++I Y +A R L+ L
Sbjct: 473 YQTMIVAYERAGLVAHAKRLLHEL 496
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 189 DRYTYSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIF 248
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G+SP+ Y S++ +G+A+ + + EM+ G+ Y+TLL+M +
Sbjct: 249 SRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVEN 308
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +F +M C D T + MI + EA+ +F M + G EP +
Sbjct: 309 GKYVEALSVFSEMNEVR-CPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVS 367
Query: 287 LTSLIQCYGKAQ 298
+L++ YG+A+
Sbjct: 368 YNTLLRVYGEAE 379
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+ P+++ YN++++ G+AK + + +
Sbjct: 224 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLL 283
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ P+ +Y++LL Y + LSV+ EM E L +T N ++ + +
Sbjct: 284 PEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQL 343
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F M+ +P ++++++ + EA +F M E N+
Sbjct: 344 DMAKEADRLFWSMRKM-GIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVT 402
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I+ YGK+ + + + GI P+
Sbjct: 403 YNTMIKIYGKSLEHEKATNLVQEMQNRGIEPN 434
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 3/247 (1%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++ YN ++ + RAK+ +++EM L+P+ TY++L+ +G+ + LS
Sbjct: 153 PSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSW 212
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
++M++ + + LY+ L+ + + +A IF +K S PD ++SMI +
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRS-GISPDLVAYNSMINVFG 271
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EA + EM G P+ ++L+ Y + + + + + + E+ D
Sbjct: 272 KAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLT 331
Query: 321 FCGCLLNVMTQTP-KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
C +++V Q +E +L + K + G V L E + EA LF +
Sbjct: 332 TCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLM 391
Query: 380 S-KDVKK 385
KD+++
Sbjct: 392 QRKDIEQ 398
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 115/276 (41%), Gaps = 75/276 (27%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+IK+YG + + N+ +EM+ G++PN ITY+ ++ +A + + +++++
Sbjct: 403 YNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLR 462
Query: 171 DNGLSPNWNTYASLLRAYGRA--------------------------------RYGEDTL 198
+G+ + Y +++ AY RA R E T
Sbjct: 463 SSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATW 522
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
V+R+ + G +T++ ++ + + E+F+ M+ + PDS + ++
Sbjct: 523 -VFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGA-GYFPDSNVIALVLNA 580
Query: 259 CSCRGKVSEAEAMFNEMLEAG---------------------------FE-----PNL-- 284
C + +A+A++ EM E G FE PN+
Sbjct: 581 CGKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPNINK 640
Query: 285 ----FVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
V+ S+ Y +A R +D + +NR+ E GI+
Sbjct: 641 KELHLVVASI---YERANRLNDASQIMNRMRERGIS 673
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
SP+ Y ++R RA+ E ++ EM+++ + Y+TL+ G D A
Sbjct: 152 SPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALS 211
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+ M+ + D +S++I + S+A ++F+ + +G P+L S+I +
Sbjct: 212 WLQKME-QDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVF 270
Query: 295 GKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
GKA+ + L + G+ PD LL++ + GK VE +
Sbjct: 271 GKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVEN-----GKYVEAL 315
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++D
Sbjct: 487 AHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLF 546
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
R ++ V ++ +M G P+ N A +L A G+ R E ++Y+EM+E+G S
Sbjct: 547 SRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEMEEEGCVFSD 606
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
++ +L++ G +FE + S N + +I ++++A + N
Sbjct: 607 EVHFQMLSLYGARGDFQMVDSLFERLDSDPNINKKELHL-VVASIYERANRLNDASQIMN 665
Query: 274 EMLEAGF 280
M E G
Sbjct: 666 RMRERGI 672
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 14/284 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN ++T I D ++YEEM +GV P+++T + L+D + RA R +
Sbjct: 267 VEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAY 326
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM G +PN TY +L+ + +AR G ++ + E+ +G+ + + +Y +L+
Sbjct: 327 ALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWL 386
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G DE ++F S+N P+ T++ +I G V AE M EM + PN
Sbjct: 387 GKQGKIDEVKDMFH-CALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPN 445
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG----- 338
+ +S+I K + ++ E GI P+ G +++ + ++E
Sbjct: 446 VVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYH 505
Query: 339 -KLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
L E VE + ++V LL+ G +EA LF ++K
Sbjct: 506 EMLCEGVEVNK----FIVDLLVNGLRKNGKM-EEAEALFRDMNK 544
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
R R E R+D ++ L+ Y +G+ + L + M+ GV +++ YN L+ + RA
Sbjct: 191 VRGR-EIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRA 249
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + + M +G+ PN TY + + R +D S+Y EM G+ V
Sbjct: 250 GEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTL 309
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+ L+ G EA+ +F +M+ P+ T+ ++I + SE+ + E++
Sbjct: 310 SALVDGLCRAGRFSEAYALFREMEKI-GAAPNHVTYCTLIDSLWKARRGSESHGLLGEVV 368
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDV 303
G +L + TSL+ GK + D+V
Sbjct: 369 SRGVVMDLVMYTSLMDWLGKQGKIDEV 395
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 5/224 (2%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++L+ G G D +++ + PN +TY L+D + RA + +
Sbjct: 374 MDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQM 433
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM D + PN T++S++ + R+MKE+G+ +V Y T++
Sbjct: 434 LLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFK 493
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ A +++ +M E + + + ++ GK+ EAEA+F +M + G +
Sbjct: 494 CQEQESALDLYHEMLC-EGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHV 552
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----DRFCGCL 325
T+LI K + L E ++PD + F CL
Sbjct: 553 NYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCL 596
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN FS++I G + +MK G+ PN++TY ++D + +
Sbjct: 438 EDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQ 497
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+Y EM G+ N L+ + E+ +++R+M ++GM L Y TL
Sbjct: 498 ESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTL 557
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ +G AF++ +++ + N PD+ ++ + GK EAE++
Sbjct: 558 IDGLFKMGNMPAAFKVGQEL-TERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 5/202 (2%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD----NGLSP 176
A D L V+ EM+ V P+++TYN LL RA R Q T+ +EM + + + P
Sbjct: 154 ADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVP 213
Query: 177 NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF 236
+ +Y +++ + +AR V R M + G +V +NTLL G DEA +F
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMF 273
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
E M NC+P + T++ +IT + ++ +A F +ML G EPN++ T+LI
Sbjct: 274 EYM-VERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCD 332
Query: 297 AQRTDDVVRALNRLPELGITPD 318
A + +D + L R+ G P+
Sbjct: 333 ANKVEDALEILKRMSSTGREPN 354
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 102/247 (41%), Gaps = 9/247 (3%)
Query: 68 GKTGSS--PKSYIW--VNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTA 121
GK GS P Y + V +A +L Y R R K PN F+TL+
Sbjct: 205 GKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLR-RMIKSGCSPNVVTFNTLLDGLCLT 263
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G D ++E M +P +TY L+ RA R + + +M G+ PN TY
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+L+ A ED L + + M G + +V Y ++ G + A ++F D
Sbjct: 324 TALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMG 383
Query: 242 SEN--CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
S C+PDS+ +S+++ + K EA F M+E+ + ++ Q
Sbjct: 384 SRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQE 443
Query: 300 TDDVVRA 306
T+ V R
Sbjct: 444 TEKVERV 450
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+ TYN L+ + + + + I+ +M PN TY +LR + L + +
Sbjct: 37 VFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQ 96
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+M+ K + + + N L++ G D A+E+++ + S+ C D ++ +M+T C+
Sbjct: 97 DMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL--SDECSLDRISY-NMLTYGLCK 153
Query: 263 G-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++ A A+F EM E P+L L+ Y +A R + + L + E
Sbjct: 154 ADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIE 204
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 113/314 (35%), Gaps = 75/314 (23%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKA 136
++ N KSP KL + + AR E ++ ++ + G+ ++++M
Sbjct: 9 HVLENIKSP---KLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLY 65
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPN------------------- 177
PN+ TY +L + + + ++M L+P
Sbjct: 66 KECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDA 125
Query: 178 -WNTYASL------------LRAYG--RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ Y L + YG +A + L+V+ EM+E + S+ YN LL
Sbjct: 126 AYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYG 185
Query: 223 CADVGYTDEAFEIFEDM---KSSENCQPDSWTFSSMIT-ICSCR---------------- 262
G ++A + E+M K + PD ++++++I+ C R
Sbjct: 186 YCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSG 245
Query: 263 ------------------GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
GK+ EA AMF M+E EP T LI + +A R D
Sbjct: 246 CSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKAN 305
Query: 305 RALNRLPELGITPD 318
+ G+ P+
Sbjct: 306 DYFVDMLRRGVEPN 319
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 141/331 (42%), Gaps = 12/331 (3%)
Query: 95 YDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+ A+ K + P F+TLI AG F L ++++M A G +P++ TY +++
Sbjct: 146 FSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIING 205
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ + + K+M + G P+ TY++L+ + + R + L ++ MK KG+ +
Sbjct: 206 LCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPT 265
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V Y +L+ EA + +M +S N PD TFS +I I G V EA+ +
Sbjct: 266 VVSYTSLIQGLCSFSRWKEASAMLNEM-TSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVL 324
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN--VMT 330
M E G EPN+ SL+ Y + + + + G PD L+N M
Sbjct: 325 KTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMV 384
Query: 331 QTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNC 390
+ E E + + + L+ G +EA ELF + +
Sbjct: 385 KRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL-REARELFKDMHTN------GY 437
Query: 391 LIDLCVNLNLLENACKLLELGLTLEVYTDIQ 421
L DLC LLE CK LG ++ +Q
Sbjct: 438 LPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQ 468
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FS LI ++ GN V + M +GV+PN+ITYN+L+ + + ++
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G P+ +Y+ L+ Y + ++ ++ EM +G+ + Y TL+ +
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA E+F+DM ++ PD T+S ++ +G + +A +F M +PNL +
Sbjct: 420 GKLREARELFKDMHTN-GYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVM 478
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
T LI K+ + + + L G+ PD + ++N
Sbjct: 479 YTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIIN 519
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTIYKEMTDNGLSPNWNTY 181
N D L + M P +I +N LL + R ++ + V ++ K+M GLSPN T
Sbjct: 70 NIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTL 129
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
L+ + ++ + SV ++ + G+Q ++ + TL+ G +A E+F+DM
Sbjct: 130 NILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDM-V 188
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ CQPD +T++++I G+ + A + +M E G +P++ ++LI K + +
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVN 248
Query: 302 DVVRALNRLPELGITP 317
+ + + + GI+P
Sbjct: 249 EALDIFSYMKAKGISP 264
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S LI Y D ++ EM G+ PN ++Y L+ + + + + ++
Sbjct: 370 DVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELF 429
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K+M NG P+ TY+ LL + + Y ++R M+ ++ ++ +Y L+
Sbjct: 430 KDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKS 489
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A ++F ++ QPD ++++I G + EA F +M E G PN F
Sbjct: 490 GNLNHARKLFSEL-FVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFS 548
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+I+ + + + V+ + + + G D+
Sbjct: 549 YNVIIRGFLQHKDESRAVQLIGEMRDKGFVADE 581
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 5/202 (2%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD----NGLSP 176
A D L V+ EM+ V P+++TYN LL RA R Q T+ +EM + + + P
Sbjct: 154 ADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVP 213
Query: 177 NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF 236
+ +Y +++ + +AR V R M + G +V +NTLL G DEA +F
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMF 273
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
E M NC+P + T++ +IT + ++ +A F +ML G EPN++ T+LI
Sbjct: 274 EYM-VERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCD 332
Query: 297 AQRTDDVVRALNRLPELGITPD 318
A + +D + L R+ G P+
Sbjct: 333 ANKVEDALEILKRMSSTGREPN 354
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 9/247 (3%)
Query: 68 GKTGSS--PKSYIW--VNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTA 121
GK GS P Y + V +A +L Y R R K PN F+TL+
Sbjct: 205 GKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLR-RMIKSGCSPNVVTFNTLLDGLCLT 263
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G D ++E M +P +TY L+ RA R + + +M G+ PN TY
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+L+ A ED L + + M G + +V Y ++ G + A ++F D
Sbjct: 324 TALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMG 383
Query: 242 SEN--CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
S C+PDS+ +S++I + K EA F M+E+ + ++ Q
Sbjct: 384 SRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQE 443
Query: 300 TDDVVRA 306
T+ V R
Sbjct: 444 TEKVERV 450
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+ TYN L+ + + + + I+ +M PN TY +LR + L + +
Sbjct: 37 VFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQ 96
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+M+ K + + + N L++ G D A+E+++ + S+ C D ++ +M+T C+
Sbjct: 97 DMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL--SDECSLDRISY-NMLTYGLCK 153
Query: 263 G-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++ A A+F EM E P+L L+ Y +A R + + L + E
Sbjct: 154 ADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIE 204
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 112/314 (35%), Gaps = 75/314 (23%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKA 136
++ N KSP KL + + AR E + ++ + G+ ++++M
Sbjct: 9 HVLENIKSP---KLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLY 65
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPN------------------- 177
PN+ TY +L + + + ++M L+P
Sbjct: 66 KECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDA 125
Query: 178 -WNTYASL------------LRAYG--RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ Y L + YG +A + L+V+ EM+E + S+ YN LL
Sbjct: 126 AYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYG 185
Query: 223 CADVGYTDEAFEIFEDM---KSSENCQPDSWTFSSMIT-ICSCR---------------- 262
G ++A + E+M K + PD ++++++I+ C R
Sbjct: 186 YCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSG 245
Query: 263 ------------------GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
GK+ EA AMF M+E EP T LI + +A R D
Sbjct: 246 CSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKAN 305
Query: 305 RALNRLPELGITPD 318
+ G+ P+
Sbjct: 306 DYFVDMLRRGVEPN 319
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K +D R E D +++TL+ Y G L V+ EM G+ P+++T+ +L+
Sbjct: 102 KVFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 160
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+A Q + +M + GL N T+ +L+ + + + +D L EM++ G+Q S
Sbjct: 161 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 220
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V YN L+ +G D A E+ +M+ ++ +PD T+S++I+ G + A +
Sbjct: 221 VVCYNALINGYCKLGRMDLARELIREME-AKRVKPDVVTYSTIISGYCKVGNLDSAFQLN 279
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ML+ G P+ +SLI+ + +R +D + +LG+ PD+
Sbjct: 280 QKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 4/215 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L++ G + + V +M+ G PN +TYN L+ RA +
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65
Query: 164 TIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ M + G PN T+ S++ +A E V+ EM +G+ V YNTLL+
Sbjct: 66 RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
VG E+ +F +M + PD TF+S+I G + +A A+ +M E G
Sbjct: 126 YCKVGCLHESLAVFSEM-TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
N T+LI + K DD + A+ + + GI P
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 219
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 4/214 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKT 164
PNA ++TL+ + AG DG V M+ G KPN++T+N++++ + +A R +
Sbjct: 43 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK 102
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM GL+P+ +Y +LL Y + ++L+V+ EM ++G+ V + +L+
Sbjct: 103 VFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATC 162
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++A + M+ + + TF+++I +G + +A EM + G +P++
Sbjct: 163 KAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 221
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI Y K R D + + + PD
Sbjct: 222 VCYNALINGYCKLGRMDLARELIREMEAKRVKPD 255
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R R++ F+ LI + G D L EEM+ G++P+++ YN L++ + R
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +EM + P+ TY++++ Y + + + ++M +KG+ Y++L
Sbjct: 238 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 297
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + ++A E+FE+M QPD +T++++I G V +A ++ +EM+ G
Sbjct: 298 IRGLCEEKRLNDACELFENMLQL-GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
P++ + LI K+ RT + R L +L PD+
Sbjct: 357 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 396
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 169 MTDNGLSPNWNTYASLLRAY-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M +G++PN TY L+RA R R E+ + V +M+ G + YNTL+A G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRL-EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 59
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A + M+ N +P+ TF+SM+ G++ A +F+EM+ G P++
Sbjct: 60 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ Y K + + + + + G+ PD
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 150
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E R+ P+ +ST+I Y GN D + ++M GV P+ ITY++L+ + KR
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+++ M G+ P+ TY +L+ + + E LS++ EM KG+ V Y+ L
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGK 264
+ + T EA + + E+ PD+ + +++ CS +G
Sbjct: 368 INGLSKSARTKEAHRLLFKL-YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 426
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLI--QCYGKAQR 299
+ EA+ ++ ML+ ++ + V + LI C G R
Sbjct: 427 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 463
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 3/228 (1%)
Query: 94 SYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+Y +K P+ F+ LI Y GN L V+EEM GV+ +TY +L+
Sbjct: 273 AYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIY 332
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
R + + ++ G+ P+ Y +L+ ++ E + EM++K +
Sbjct: 333 VFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP 392
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
YNTL+ +G DEA + ++M + QPD +++++I+ S +G + +A +
Sbjct: 393 DDMTYNTLMRGFCLLGRLDEARTLIDEM-TKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+EM++ GF P L +LIQ K ++ DD + + GITPDD
Sbjct: 452 RDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDD 499
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 38/252 (15%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + P+A ++ LI Y G D L E+M G+ + TYN L+ + R
Sbjct: 212 KGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARAS 271
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS-------- 212
+ +EM NG SP+ TY L+ Y + + L V+ EM +KG++ +
Sbjct: 272 DAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLI 331
Query: 213 ---------------------------VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
V +YN L+ G + A+EI +M+ +
Sbjct: 332 YVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEME-KKRI 390
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD T+++++ G++ EA + +EM + G +P+L +LI Y D +R
Sbjct: 391 PPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALR 450
Query: 306 ALNRLPELGITP 317
+ + + G P
Sbjct: 451 VRDEMMDKGFNP 462
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 98 RARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLD--- 151
R E+ I P+ ++TLI + G + + V++EM G V P+ + YN L+
Sbjct: 171 REMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYC 230
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+G+ Q + ++M G++ TY L+ A D +V EM++ G
Sbjct: 231 DVGKLDVALQYR---EDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSP 287
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
V YN L+ G +A E+FE+M S + + + T++S+I + S +G+V E + +
Sbjct: 288 DVFTYNILINGYCKEGNEKKALEVFEEM-SQKGVRATAVTYTSLIYVFSRKGQVQETDRL 346
Query: 272 FNEMLEAGFEPNLFVLTSLI--QCYGKAQRTDDVVRALNRLPEL---GITPDD 319
FN ++ G P++ + +LI C G D+ RA + E+ I PDD
Sbjct: 347 FNVAVKKGIRPDVVMYNALINSHCTG-----GDMERAYEIMAEMEKKRIPPDD 394
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 7/225 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKT 164
PNA ++T+I + G L V EM+ G + P+ TY L+ + R
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVK 204
Query: 165 IYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
++ EM G ++P+ Y +L+ Y + L +M ++G+ ++V YN L+ A+
Sbjct: 205 VFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL 264
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
D +D A+ + E+M+ + PD +T++ +I G +A +F EM + G
Sbjct: 265 FMDARASD-AYAVLEEMQKN-GFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRA 322
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
TSLI + + + + R N + GI PD L+N
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALIN 367
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A + R D ++ LI + T G+ + + EM+ + P+ +TYN L+ R
Sbjct: 350 AVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGR 409
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ +T+ EMT G+ P+ +Y +L+ Y +D L V EM +KG ++ YN
Sbjct: 410 LDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNA 469
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
L+ + D+A + ++M ++ PD T+ S+I
Sbjct: 470 LIQGLCKIRQGDDAENLMKEM-VAKGITPDDSTYISLI 506
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L +Y ++K++ V + + + LL ++ A IY+ L T+ +LR
Sbjct: 70 LRLYAQLKSLSVPIPVASLHPLLSSLPSAPAFALFADIYRLR----LPLCTTTFNIMLRH 125
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
L + R+M +VT YNT++A G A E+ +M+ P
Sbjct: 126 LCATGKPVRALELLRQMPRPN---AVT-YNTVIAGFCARGRVQAALEVMREMRERGGIAP 181
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQCYGKAQRTDDVVRA 306
D +T++++I+ G++ +A +F+EML G P+ + +LI Y + D ++
Sbjct: 182 DKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQY 241
Query: 307 LNRLPELGI 315
+ + GI
Sbjct: 242 REDMVQRGI 250
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 99 ARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
AR +K PN ++ LI G + + +Y +M G+ PN +TYN L++ +
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 386
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R I+ M +G N TY +++ E + ++ +M + G +V Y
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NTL+ G + A + + MK + C+PD WT++ +++ S GK+ A F EM+
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKEN-GCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
E G PN T+LI + K + D + L R+ E+G P+
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P +++ LI + G D L++ + M+ +G PN+ +YN +++ + + R + + I
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + GL PN TY +L+ R + ++ +M+++ ++ Y++L+
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA + S C+P T+S++++ +G+ EAE + +M E GF P+ +
Sbjct: 632 GKADEA-----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 686
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELG 314
SL+ + K D ++ + + G
Sbjct: 687 YYSLLIAHCKNLEVDHALKIFHSIEAKG 714
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+G N+Y++M G++P+++T+N L++ + + + + + I ++ LSP+ TY SL
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ + R R + V+ M ++G + Y+TL+ + G DEA ++ E+M +
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM-IEKG 298
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+P +T++ IT EA + M + G PN+ T+LI + + + +
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358
Query: 305 RALNRLPELGITPDDRFCGCLLN 327
+++ + G+ P+ L+N
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALIN 381
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
EK + PN ++ +YG +G + E M IG +P + TY+ L+ + R R ++
Sbjct: 610 EKRKCLPNLYTYSSLIYGLCQ--EGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYE 667
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ + K+M + G P+ Y SLL A+ + + L ++ ++ KG QL +++Y L+
Sbjct: 668 AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALIC 727
Query: 222 MCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +EA +F++M E N WT ++ G++ + + M F
Sbjct: 728 ALCKAGQVEEAQALFDNMLEKEWNADEIVWTV--LVDGLLKEGELDLCMKLLHIMESKNF 785
Query: 281 EPNL 284
PN+
Sbjct: 786 TPNI 789
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 38/254 (14%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
++ + P+ F+ +LI + N D V++ M G PN +TY+ L++ + R
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285
Query: 161 QVKTIYKEMTDNGLS-----------------------------------PNWNTYASLL 185
+ + +EM + G+ PN TY +L+
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
R E + +Y +M ++G+ + YN L+ G A +IF M+
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGS 404
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
++ T++ +I G + +A +F +ML+ G P + +LI Y ++ R
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 306 ALNRLPELGITPDD 319
L+ + E G PD+
Sbjct: 465 LLDLMKENGCEPDE 478
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI + G + ++ + P++ TY +L+ R + ++ M
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G PN TY++L+ ++ L + EM EKG++ +V Y + + + +
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E+ MK C+P+ T++++I+ S GK+ A ++++ML+ G PN +L
Sbjct: 321 EAIELVARMK-KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379
Query: 291 IQ--CYG 295
I C G
Sbjct: 380 INELCVG 386
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+V E++ G + + +LL + E ++Y++M G+Q S+ +NTL+
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAG 279
+ + G EA E+ + PD +T++S+I + CR + + A +F+ M++ G
Sbjct: 206 NILSKKGKVREA-ELILSQIFQYDLSPDVFTYTSLI-LGHCRNRNLDLAFGVFDRMVKEG 263
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+PN ++LI R D+ + L + E GI P
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 4/212 (1%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P ++ +I L G NFD V + MKA V+ ++ T++ L+ RA + +
Sbjct: 142 PEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFN 201
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M D P+ ++ L+ R R + S + +K+K + V +Y L+ G
Sbjct: 202 RMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAG 260
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +MK + C P+ +T++ +I +C C G+++ A +F EML+ G EPN
Sbjct: 261 NIPEAERVFTEMKVA-GCMPNVYTYTIVIDALCRC-GQITRAHDVFAEMLDVGCEPNSIT 318
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L++ + KA RT+ V++ N++ +G PD
Sbjct: 319 FNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPD 350
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 3/218 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K+ D ++ L++ + AGN V+ EMK G PN+ TY ++D + R + +
Sbjct: 240 DKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITR 299
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL- 220
++ EM D G PN T+ +LLR + +A E L VY +MK G YN L+
Sbjct: 300 AHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIE 359
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ C D G DEA ++ M + C P++ TF+ + + V+ A ++ +M E
Sbjct: 360 SHCKD-GNLDEALKVLNSM-VKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKC 417
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ N L++ + + TD V++ + E + P+
Sbjct: 418 KANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPN 455
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R E + P+ AFS LI + + ++ +K +P++I Y NL+ RA
Sbjct: 202 RMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAG 260
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + ++ EM G PN TY ++ A R V+ EM + G + + +N
Sbjct: 261 NIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFN 320
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
LL + G T++ +++ MK C PD+ T++ +I G + EA + N M++
Sbjct: 321 NLLRVHVKAGRTEKVLQVYNQMKRM-GCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVK 379
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
G PN L K + + R ++ EL
Sbjct: 380 KGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKEL 415
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 80/174 (45%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+ + GN D L V M G PN T+N L ++ + + +Y
Sbjct: 350 DTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLY 409
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + N TY L+R + + + L + +EM E ++ +V Y L+AM +
Sbjct: 410 AKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGM 469
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G+ + A++ F +M + +P + ++ G++ + E + M++ GF
Sbjct: 470 GHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGF 523
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 112/248 (45%), Gaps = 25/248 (10%)
Query: 146 YNNLLDTMGRAKR---PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
YN ++D G+ + WQV + M + + T++ L+R Y RA + + +
Sbjct: 145 YNEMIDLAGKVRNFDLGWQVIDL---MKARNVEISIETFSILIRRYVRAGLASEAVHAFN 201
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
M++ + ++ L+++ EA F+ +K + +PD +++++
Sbjct: 202 RMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLK--DKFEPDVIVYTNLVRGWCRA 259
Query: 263 GKVSEAEAMFNEMLEAGFEPNLF----VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + EAE +F EM AG PN++ V+ +L +C G+ R DV + ++G P+
Sbjct: 260 GNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRC-GQITRAHDV---FAEMLDVGCEPN 315
Query: 319 DRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLG-----YVVKLLLEEQDIEGDFKKEAT 373
LL V + + E K+++ V ++G L+E +G+ EA
Sbjct: 316 SITFNNLLRVHVKAGRTE--KVLQ-VYNQMKRMGCPPDTVTYNFLIESHCKDGNL-DEAL 371
Query: 374 ELFNSISK 381
++ NS+ K
Sbjct: 372 KVLNSMVK 379
>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
macropoda]
Length = 427
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN++ G+
Sbjct: 184 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKTLEHE 243
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 244 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMI 303
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 304 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 358
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 359 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 405
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 119 PNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN++ +
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGK 238
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 239 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQI 297
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 298 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 331
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 15 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 74
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + Y+TLL M +
Sbjct: 75 SRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVEN 134
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 135 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 193
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 194 YNTLLRVYGDAE 205
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 50 DLVLYSNLIELSRKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLI 109
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 110 GEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 169
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 170 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 228
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM I + +A + EM G EPN +++I +GK + D +L
Sbjct: 229 YNSMXMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 288
Query: 312 ELGITPD 318
GI D
Sbjct: 289 SSGIEID 295
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA ++ EM AG PN
Sbjct: 63 KLCDYSKAISIFSRLKKS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNT 121
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 122 XSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 168
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 313 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 372
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G
Sbjct: 373 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 427
>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 426
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN ++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 297 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +V ++ LG PD +LN
Sbjct: 352 VKDITVFERMIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLN 398
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST++ +Y F L+V+ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTVSYSTILTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 173 WSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M+ + +P++ T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 233 LEHEKANNLIQEMQ-NRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G++P+ Y S++ +G+A+ ++ S+ EM+ G+ Y+T+L M +
Sbjct: 68 SRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ NC D T + MI + EA+ +F M + G EPN+
Sbjct: 128 HKFLEALSVFREMREI-NCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+ P+++ YN++++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ P+ +Y+++L Y + LSV+REM+E
Sbjct: 103 SEMRVAGVMPDTVSYSTILTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 DMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++M+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ +D LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD ++SMI + EA ++ +EM AG P+ +++
Sbjct: 62 KAISIFSRLKRS-GITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTI 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + + + + + E+ D C +++V Q
Sbjct: 121 LTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQ 161
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 52/115 (45%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++D
Sbjct: 306 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLF 365
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ ++ V ++++M G P+ N A +L AYG+ + VY EM+++G
Sbjct: 366 SKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANEVYMEMQDEG 420
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+E+ + Y+TL+ G D+A + M+ + D +S++I +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQ-DRVPGDLVLYSNLIELSRKLCD 59
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
S+A ++F+ + +G P+L S+I +GKA+ + ++ + G+ PD
Sbjct: 60 YSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYST 119
Query: 325 LLNVMTQTPK--EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+L + + K E L E E N L ++ + + D KEA LF S+ K
Sbjct: 120 ILTMYVENHKFLEALSVFREMRE-INCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRK 177
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAK 157
+ +I PN F+ +I G + +V E+MK G PN+++YN L+D +G
Sbjct: 216 RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNG 275
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ + KEM +N +SPN T+ L+ + + +L V++EM ++ + +V YN
Sbjct: 276 KMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYN 335
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L+ + G +EA + + M S+ QP+ T+ S+I G + EA MF+ +
Sbjct: 336 SLINGLCNGGKINEAIGMRDKMVSA-GVQPNLITYHSLINGFCKNGMMKEALDMFDSVKG 394
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
G P + LI Y K + DD + GI PD CL+
Sbjct: 395 QGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+ LI + N G L V++EM V PN+ITYN+L++ + + +
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAI 351
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +M G+ PN TY SL+ + + ++ L ++ +K +G + + +YN L+
Sbjct: 352 GMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAY 411
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G D+ F + E+M+ E PD T++ +I G + A+ +F+++ G P+
Sbjct: 412 CKLGKIDDGFALKEEME-REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PD 469
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
L L++ Y + L + ++G+ P
Sbjct: 470 LVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKP 503
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI Y G D + EEM+ G+ P++ TYN L+ + R K ++ ++T
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ GL P+ T+ L+ Y + +EM + G++ YN ++ G
Sbjct: 464 NKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLK 522
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A + M+ + + +++ ++ S +GK+ +A + NEMLE G PN
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 130/335 (38%), Gaps = 72/335 (21%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
L+ Y F+ ++ G K + ++ L+ + + R V+ +YKEM
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRK 218
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG-----Y 228
+ PN T+ ++ A + V +MK G +V YNTL+ +G Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 229 TDEA---------------------------------FEIFEDMKSSENCQPDSWTFSSM 255
+A ++F++M ++ P+ T++S+
Sbjct: 279 KADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEM-LDQDVIPNVITYNSL 337
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I GK++EA M ++M+ AG +PNL SLI + K + + + + G
Sbjct: 338 INGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGT 397
Query: 316 TPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATEL 375
P R L++ + LGK+ + G+ +K EE + EG
Sbjct: 398 RPTTRMYNMLIDAYCK-----LGKIDD---------GFALK---EEMEREG--------- 431
Query: 376 FNSISKDVKKAYCNCLI-DLCVNLNLLENACKLLE 409
I DV NCLI LC N N +E A KL +
Sbjct: 432 ---IVPDV--GTYNCLIAGLCRNGN-IEAAKKLFD 460
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PNA ++TL+ + G + + E M+ G+ P++ YN+L+ +AKR + +
Sbjct: 447 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 506
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T EM + L PN +TY + + Y +A E + EM G+ +V +Y L+
Sbjct: 507 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 566
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EAF +F + S Q D T+S +I S GK+ EA +F+E+ E G PN
Sbjct: 567 CKEGNVTEAFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 625
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F SLI K D + L + GI PD
Sbjct: 626 AFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 660
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNAF+ +LI GN D + EEM G+ P+++TYN L+D + +A + K +
Sbjct: 624 PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL 683
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ ++ GL+PN TYA+++ Y +++ + EM +G+ +YN +L C
Sbjct: 684 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK 743
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A ++F++M E + +F+++I GK+ EA + EM+E F PN
Sbjct: 744 EEKFEKALDLFQEM--LEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 801
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
TSLI KA + R + E + P
Sbjct: 802 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP 833
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P ++ LI + G+ + + +EM A G++ N+I +N LL+ + +A + + I
Sbjct: 310 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 369
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + G+ P+ TY+ L+ + R + + EMK++ + +V Y+ ++
Sbjct: 370 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 429
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G I +M + +P++ +++++T + G+V E+ + M E G P++F
Sbjct: 430 GNLQGTNAILREMVMN-GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 488
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
SLI + KA+R ++ L + E + P+ G ++ ++ + E+
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 108/250 (43%), Gaps = 39/250 (15%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+A L+++ A D + + M G+ P++ TY+ L++ KR + K + E
Sbjct: 242 DAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLE 301
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M D GL P TY +L+ + R E + EM G++ ++ ++NTLL G
Sbjct: 302 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 361
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMIT------------------------------- 257
++A EI ++M + +PDS T+S +I
Sbjct: 362 MEKALEIMQEMM-EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 420
Query: 258 -----ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+C C G + A+ EM+ G +PN V T+L+ + K R ++ L R+ E
Sbjct: 421 VIINGLCRC-GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 479
Query: 313 LGITPDDRFC 322
GI P D FC
Sbjct: 480 QGILP-DVFC 488
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 10/322 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+ + N + +EMK + P ++TY+ +++ + R I
Sbjct: 380 DSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAIL 439
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM NGL PN Y +L+ A+ + E++ + M+E+G+ V YN+L+
Sbjct: 440 REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKA 499
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA +M +P++ T+ + I S G++ A+ FNEML G PN+ +
Sbjct: 500 KRMEEARTYLMEM-LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 558
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVECV 344
T+LI+ + K + + + D + L++ +++ K E G E
Sbjct: 559 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 618
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENA 404
EK + L+ +G+ K + L K + D+ L++
Sbjct: 619 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP-------DIVTYNILIDGL 671
Query: 405 CKLLELGLTLEVYTDIQSRSPT 426
CK E+ ++ DI+ R T
Sbjct: 672 CKAGEIERAKNLFDDIEGRGLT 693
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 114/252 (45%), Gaps = 2/252 (0%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A +++E ++Y + R + + + I Y AG + + EM + GV PN+
Sbjct: 498 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 557
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
Y L++ + + ++++ + + + TY+ L+ R + ++ E+
Sbjct: 558 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+EKG+ + YN+L++ G D+A ++ E+M + PD T++ +I G+
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGE 676
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ A+ +F+++ G PN +++ Y K++ + L + G+ PD
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736
Query: 325 LLNVMTQTPKEE 336
+LN + K E
Sbjct: 737 ILNFCCKEEKFE 748
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 4/251 (1%)
Query: 71 GSSPKSYIWVNPKSPRASKLK-EKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGC 127
G P + ++ + A + + E+S R + I P+ F ++LI + A +
Sbjct: 446 GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 505
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
EM ++PN TY +D +A + EM G+ PN Y +L+
Sbjct: 506 RTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEG 565
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ + + SV+R + + + V Y+ L+ + G EAF IF +++ + P
Sbjct: 566 HCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ-EKGLLP 624
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+++T++S+I+ +G V +A + EM G P++ LI KA +
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 684
Query: 308 NRLPELGITPD 318
+ + G+TP+
Sbjct: 685 DDIEGRGLTPN 695
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ F L+ Y G +NV+ K +P++++ N+LL + + + +
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211
Query: 166 YKEMTDNGLSPNWNTYASLLRAY-----------------GRARYGEDTLSVYREMKEKG 208
+ M + + P+ TY +++ A+ +AR ++ + + R M +KG
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271
Query: 209 MQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
+ + Y+ L+ C + + + E + +P+ T++++I +G + +
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG--LKPEPITYNALIDGFMRQGDIEQ 329
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
A + +EM+ G E NL + +L+ KA + + + + + E G+ PD +
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 382
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 45/207 (21%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+F+TLI+ Y +G ++ EEM PN +TY +L+D +A + K ++ EM
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + P TY SLL Y ++G
Sbjct: 827 QERNVMPTAKTYTSLLHGY-----------------------------------HNIGNM 851
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML------EAGFE-- 281
E +FE+M ++ +PD T+ MI G V EA + +E+L ++GF
Sbjct: 852 SEVSALFEEM-VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLG 910
Query: 282 -PNLFVLTSLIQCYGKAQRTDDVVRAL 307
P V+ Q G +V+R++
Sbjct: 911 LPTCSVIARGFQIAGNMDEAAEVLRSM 937
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 135/276 (48%), Gaps = 23/276 (8%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN ++ LI Y D ++YE M GV P+++T + L+D + R + +
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAY 312
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM G++PN TY +L+ + +AR G ++L + EM +G+ + + +Y L+
Sbjct: 313 ALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRL 372
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEP 282
G +EA ++ + S+N P+ T++ ++ CR G + AE + +M E P
Sbjct: 373 GKEGKIEEAKDVLRHAQ-SDNITPNFVTYTVLVD-AHCRAGNIDGAEQVLLQMEEKSVIP 430
Query: 283 NLFVLTSLIQ------CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
N+ +S+I C GKA D +R ++ + GI P+ G L++ + +E
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAA---DYMR---KMKDSGIAPNVVTYGTLIDGFFKFQGQE 484
Query: 337 LG------KLVECVEKSNSKLGYVVKLLLEEQDIEG 366
L E VE +N + +V L + +IEG
Sbjct: 485 AALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEG 520
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 3/228 (1%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
KS+ RN D ++T+I G L + +EMK +KPN+ITY L+
Sbjct: 592 KSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVG 651
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ A + K + EM G +P T+ +L+A +R + L ++ M G+
Sbjct: 652 LLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHAD 711
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAM 271
+T+YNTL+ + G A + ++M + PD+ TF+++I + C+ + A A+
Sbjct: 712 ITVYNTLVHVLCCHGMARNATVVLDEML-TRGIAPDTITFNALI-LGHCKSSHLDNAFAI 769
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ +ML G PN+ +L+ A R + L+ + ++G+ P++
Sbjct: 770 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNN 817
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI + + + D +Y +M G+ PN+ T+N LL + A R + T+
Sbjct: 746 DTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVL 805
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M GL PN TY L+ Y + + L +Y EM KG + YN+L++ A
Sbjct: 806 SDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKA 865
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A E+F +MK S T+ ++ S E + +M E GF+P+
Sbjct: 866 GMMNQAKELFSEMK-RRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGT 924
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
++S+ + + + T + R L L
Sbjct: 925 ISSMSRAFSRPGMTGEARRLLKTL 948
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 38/264 (14%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ D + I PN ++ L+ + AGN DG V +M+ V PN++T++++
Sbjct: 379 EEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSI 438
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR------- 202
++ + + + ++M D+G++PN TY +L+ + + + E L VYR
Sbjct: 439 INGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGV 498
Query: 203 ----------------------------EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+M E+G+ L Y TL+ G AF+
Sbjct: 499 EANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFK 558
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+ +++ +N PD+ ++ I GK SEA++ EM G EP+ ++I
Sbjct: 559 VGQELM-EKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAAR 617
Query: 295 GKAQRTDDVVRALNRLPELGITPD 318
+ +T ++ L + I P+
Sbjct: 618 CREGKTSKALKLLKEMKRNSIKPN 641
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 1/203 (0%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D L ++E M G+ ++ YN L+ + + EM G++P+ T+ +L
Sbjct: 694 DVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNAL 753
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ + ++ + ++ ++Y +M +G+ ++ +NTLL G EA + DMK
Sbjct: 754 ILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKV-G 812
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+P++ T+ ++T + + EA ++ EM+ GF P SL+ + KA +
Sbjct: 813 LEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAK 872
Query: 305 RALNRLPELGITPDDRFCGCLLN 327
+ + G+ LLN
Sbjct: 873 ELFSEMKRRGVLHTSSTYDILLN 895
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 7/216 (3%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++TL+ GN V +E+ + P+ + YN ++ + + + K+
Sbjct: 535 LDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSF 594
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM + GL P+ TY +++ A R L + +EMK ++ ++ Y TL+ +
Sbjct: 595 LKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLE 654
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A + +M S+ P S T ++ CS + + M+ AG ++
Sbjct: 655 AGVVKKAKFLLNEMASA-GFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADIT 713
Query: 286 VLTSLIQ---CYGKAQRTDDVVRALNRLPELGITPD 318
V +L+ C+G A+ V L+ + GI PD
Sbjct: 714 VYNTLVHVLCCHGMARNATVV---LDEMLTRGIAPD 746
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 102/211 (48%), Gaps = 7/211 (3%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPN---W 178
GN +G ++++M G+ + + Y L+D + + + +E+ + LSP+ +
Sbjct: 516 GNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVY 575
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
N + + L G+ + S +EM+ G++ YNT++A G T +A ++ ++
Sbjct: 576 NVFINCLCTLGKF---SEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKE 632
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
MK + + +P+ T+++++ G V +A+ + NEM AGF P ++Q ++
Sbjct: 633 MKRN-SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSR 691
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
R D ++ + G+ D L++V+
Sbjct: 692 RPDVILEIHELMMGAGLHADITVYNTLVHVL 722
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 177 NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF 236
WN +L+ Y + + L+V M +G+ L V YN+L+A G D A E+
Sbjct: 189 GWN---ALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
E MK ++ +P+ T++++I C+GK + EA +++ M+ +G P++ L++L+
Sbjct: 246 ERMK-ADGVEPNVVTYTALIGE-YCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLC 303
Query: 296 KAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVECVEKSNSKLGY 353
+ + + + ++G+ P+ L++ + + + E LG L E V + G
Sbjct: 304 RDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSR-----GV 358
Query: 354 VVKLLL 359
V+ L++
Sbjct: 359 VMDLVM 364
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++++I Y AG + ++VY +M G +PN +TYN L++ G+A +
Sbjct: 284 PNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRM 343
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y+++ P+ T++SL+ Y R +D +++EM +Q +V ++ ++
Sbjct: 344 YRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCK 403
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ EA +I ++ + P ++ ++ +I I GKV EA + +M E G P+ +
Sbjct: 404 QNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKY 463
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----DRFCGCLL 326
T LI + R + + +++ E G PD + F C+L
Sbjct: 464 TYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVL 508
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 102/194 (52%), Gaps = 2/194 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI YG A + + + +Y ++ P+++T+++L+D R + K I+KEM
Sbjct: 324 YNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMG 383
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK-GMQLSVTLYNTLLAMCADVGYT 229
+ + PN T++ ++ + + + L + RE+ + + +YN ++ + G
Sbjct: 384 LHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKV 443
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
DEA I DMK + C PD +T++ +I +G++ EA +F++M+EAG P+ + S
Sbjct: 444 DEANLIVTDMKE-KGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNS 502
Query: 290 LIQCYGKAQRTDDV 303
+ C KA ++V
Sbjct: 503 FVSCVLKAGMPNEV 516
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 11/263 (4%)
Query: 73 SPKSYIWVNPKSPRASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNV 130
S +SYI V R+ + ++ K +D + + FS + AG D +
Sbjct: 107 SEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTL 166
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGL-SPNWNTYASLLRAYG 189
+ +G YN LL+++ R +++ +GL SP+ ++ +++
Sbjct: 167 LTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVC 226
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
R + L + M E G +N L+ ++ E+ ++ C P++
Sbjct: 227 RMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNA 286
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++S+I+ GK+ +A +++N+MLE+G PN LI YGKA + VR +
Sbjct: 287 VTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQ 346
Query: 310 LPELGITPD--------DRFCGC 324
L PD D +C C
Sbjct: 347 LILRHCPPDVVTFSSLIDGYCRC 369
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 7/233 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP-WQVKT 164
PNA F+TLI + AG + + ++ EM+ IG K ++TYN L+D++ + + +
Sbjct: 276 PNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD 335
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ ++ GL+P TY SL++ + AR + + + EM+ K +V Y+ L+
Sbjct: 336 LFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP-NVITYSILIDGLC 394
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPN 283
V EA + EDMK+ P T+ +I C C G++ A F +M AG PN
Sbjct: 395 KVRRMKEAAKTLEDMKA-HGYTPTVVTYGGLINGFCKC-GELKSALLFFEKMKLAGCAPN 452
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ +LI KA+R +D +R L + G PD CL++ + + E
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVE 505
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 45/252 (17%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++ LI+ + G ++V+ +MK+ G+ PN T N LL + + +
Sbjct: 30 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89
Query: 166 YKEMTDNGLSPNWNTYASLLRAY---GRARYG---------------------------- 194
++EM P ++ LLR + GR R
Sbjct: 90 FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149
Query: 195 --------EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
E + ++EMK G++ + Y+ LL+ +D G EA +F M C
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM----TCS 205
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD T++ ++ G+ EA+++ E+L+AG+EPN+F + +I CY K + ++
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265
Query: 307 LNRLPELGITPD 318
++ E P+
Sbjct: 266 FMKMIESNCVPN 277
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
A+ P+++TYN L+D + + ++ +++ KE+ G PN TY+ ++ Y + E
Sbjct: 201 AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVE 260
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ V+ +M E + +NTL+A G ++A ++F +M+ C+ T++++
Sbjct: 261 EAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI-GCKATIVTYNTL 319
Query: 256 I-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
I ++C RG V A +FN++ AG P + SLIQ + A+R + ++ + +
Sbjct: 320 IDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM 375
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++LI+ + A + ++EM+ PN+ITY+ L+D + + +R + ++M
Sbjct: 352 YNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMK 410
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G +P TY L+ + + + L + +MK G + ++NTL+ +
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ + M +E C+PD T++ +I+ +V +A+ +F+ M A PN+ L
Sbjct: 471 DGLRLLCHMH-AEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA---PNVTTFNFL 526
Query: 291 IQ 292
I+
Sbjct: 527 IR 528
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
E+MKA G P ++TY L++ + +++M G +PN + +L+ +A
Sbjct: 407 EDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKA 466
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
D L + M +G + V YN L++ ++A +F+ M C P+ T
Sbjct: 467 ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA----CAPNVTT 522
Query: 252 FSSMITICSCRGKVSEAEAMFN 273
F+ +I + KV EA + +
Sbjct: 523 FNFLIRGLCAQKKVEEARNILD 544
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N LL + A++ Q ++KE+ +PN +TY L+R + + +SV+ +MK
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ + + NTLL ++G A ++F +M++ P S + + ++ G+V
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPF-LPTSASHNILLRGFFMAGRVR 119
Query: 267 EAEAMFNEM 275
+A A +M
Sbjct: 120 DALAHLQDM 128
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 9/221 (4%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ L+++ +G D Y +M A G PN TY LL ++ +A+R + +++++ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G SPN +Y+ L+ R + ++ + EM + G Q +V Y +LL+ +G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA ++F M C PD ++ +I S +G + EA +F EMLE G P +F S
Sbjct: 139 KEAVDLFSRM-VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
L+ + + V + G P+ D FC
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + +L+ G ++++ M G P+ + YN L+D + + +
Sbjct: 120 PNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM + G P TY SLL + R S++++M +G ++ +N LL
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G EA +F +M+S C PD +++++I +GK EA+ + EM+ +G P++
Sbjct: 240 MGDMVEAHRLFLEMRSL-GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI Y K+ D ++ +P+ G+ PD
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 111/214 (51%), Gaps = 5/214 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ L+ + G+ ++ EM+++G P++++YN L+ M +P + + +
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRL 284
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ +Y L+ Y ++ + + ++ E+ + G++ Y+T++
Sbjct: 285 LREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCR 344
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNL 284
G AF +F+DM ++ + PD+ ++ I CRG +++E+ +F M++ P +
Sbjct: 345 AGKVGAAFVVFKDMIANGS-APDAAVVIPLV-IGLCRGERLTESCELFQAMVKFECVPLI 402
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ KA+R+DDV + L E G +PD
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 6/236 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+ KLKE + D +R P+ ++ LI + G+ ++EEM G P +
Sbjct: 134 KMGKLKE-AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
TYN+LL R +V++++K+M G PN T+ +LL + + + ++ E
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252
Query: 204 MKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
M+ G V YNTL+ MC+ G EA + +M S PD +++ +I S
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSK-GKPHEAQRLLREMIRS-GVGPDIVSYNILIDGYSKS 310
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + A +F E+ ++G EP+ F +++I C +A + + G PD
Sbjct: 311 GALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPD 366
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
++YN LL+ + ++ R V Y +M G PN TY LLR+ +A+ E+ SV+R
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M +G +V Y+ L+A DEA E+ +M + QP+ T+ S+++ G
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLSGLCKMG 136
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
K+ EA +F+ M+ G P+ V LI + K + R + E G P
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 99 ARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
AR +K PN ++ LI G + + +Y +M G+ PN +TYN L++ +
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG 386
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R I+ M +G N TY +++ E + ++ +M + G +V Y
Sbjct: 387 GRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTY 446
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NTL+ G + A + + MK + C+PD WT++ +++ S GK+ A F EM+
Sbjct: 447 NTLINGYLTKGNVNNAARLLDLMKEN-GCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
E G PN T+LI + K + D + L R+ E+G P+
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ + G + ++EM G+ PN ++Y L+D + + ++
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + G +PN +Y +++ + + + +M E+G+ +V Y TL+
Sbjct: 537 KRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRN 596
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T AF+IF DM+ + C P+ +T+SS+I GK EAE + EM G P+
Sbjct: 597 GRTQFAFKIFHDMEKRK-CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVT 655
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
TSLI + R D L R+ ++G P+ R LL
Sbjct: 656 FTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLL 695
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+G N+Y++M G++P+++T+N L++ + + + + + I ++ LSP+ TY SL
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ + R R + V+ M ++G + Y+TL+ + G DEA ++ E+M +
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM-IEKG 298
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+P +T++ IT EA + M + G PN+ T+LI + + + +
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358
Query: 305 RALNRLPELGITPDDRFCGCLLN 327
+++ + G+ P+ L+N
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALIN 381
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 38/254 (14%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
++ + P+ F+ +LI + N D V++ M G PN +TY+ L++ + R
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285
Query: 161 QVKTIYKEMTDNGLS-----------------------------------PNWNTYASLL 185
+ + +EM + G+ PN TY +L+
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
R E + +Y +M ++G+ + YN L+ G A +IF M+
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME-GHGS 404
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
++ T++ +I G + +A +F +ML+ G P + +LI Y ++ R
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 306 ALNRLPELGITPDD 319
L+ + E G PD+
Sbjct: 465 LLDLMKENGCEPDE 478
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI + G + ++ + P++ TY +L+ R + ++ M
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G PN TY++L+ ++ L + EM EKG++ +V Y + + + +
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E+ MK C+P+ T++++I+ S GK+ A ++++ML+ G PN +L
Sbjct: 321 EAIELVARMK-KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379
Query: 291 IQ--CYG 295
I C G
Sbjct: 380 INELCVG 386
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+V E++ G + + +LL + E ++Y++M G+Q S+ +NTL+
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAG 279
+ + G EA E+ + PD +T++S+I + CR + + A +F+ M++ G
Sbjct: 206 NILSKKGKVREA-ELILSQIFQYDLSPDVFTYTSLI-LGHCRNRNLDLAFGVFDRMVKEG 263
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+PN ++LI R D+ + L + E GI P
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G ++ L+ T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMI 302
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 303 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 357
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 358 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLN 404
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 118 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 238 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQI 296
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 297 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 330
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 14 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKXCDYSKAISIF 73
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + Y+TLL M +
Sbjct: 74 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVEN 133
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 134 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 192
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 193 YNTLLRVYGDAE 204
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 49 DLVLYSNLIELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 108
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN +Y++LL Y + + LSV+ EM+E L +T N ++ + +
Sbjct: 109 GEMKXAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 168
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F M+ +P+ ++++++ + EA +F M E N+
Sbjct: 169 GMAKEADKLFWGMRKM-GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 227
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S++ YGK + + + GI P+
Sbjct: 228 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 259
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+A IF +K S PD +++MI + EA ++ EM AG PN
Sbjct: 62 KXCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNT 120
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 167
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 58/129 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 312 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 371
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G S
Sbjct: 372 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 431
Query: 214 TLYNTLLAM 222
++ +L++
Sbjct: 432 EVHFQMLSL 440
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K+ D +++L+ + AG+ V+ +MK GVKPN+ TY+ ++D++ R + +
Sbjct: 241 HKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITR 300
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL- 220
++ EM D G PN T+ SL+R + +A E L VY +MK G YN L+
Sbjct: 301 AHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIE 360
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ C D DEA ++ + M + P++ TF+S+ + V+ A M+ +M E
Sbjct: 361 SHCKDENL-DEAVKVLDTM-VKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKC 418
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN L++ + ++ D V++ + E + P+
Sbjct: 419 MPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPN 456
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 113/212 (53%), Gaps = 4/212 (1%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P ++ +I L G +FD ++ + MK+ GV+ + T++ L+ RA + +
Sbjct: 143 PEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFN 202
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M D G P+ +++ ++ + + R + + +K K + V +Y +L+ G
Sbjct: 203 RMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-FEPDVIVYTSLVHGWCRAG 261
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+A E+F DMK + +P+ +T+S +I ++C C G+++ A +F+EM++AG +PN
Sbjct: 262 DIAKAEEVFSDMKEA-GVKPNVYTYSIVIDSLCRC-GQITRAHDVFSEMIDAGCDPNAVT 319
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL++ + KA RT+ V++ N++ LG D
Sbjct: 320 FNSLMRVHVKAGRTEKVLQVYNQMKRLGCAAD 351
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 84/174 (48%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI+ + N D + V + M GV PN T+N++ + +Y
Sbjct: 351 DTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMY 410
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + PN TY L+R + ++ + L + +EM E ++ +V Y L+ M +
Sbjct: 411 AKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEK 470
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G+ + A+ + ++M + +P+ + +++ + G++ + E + +M+ GF
Sbjct: 471 GHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGF 524
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 146 YNNLLDTMGRAKR---PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
YN ++D G+ + W + + M G+ +T++ L+R Y RA + + +
Sbjct: 146 YNEMIDLAGKLRHFDLAWHLIDL---MKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFN 202
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
M++ G + ++ +++ EA F+ +K +PD ++S++
Sbjct: 203 RMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLK--HKFEPDVIVYTSLVHGWCRA 260
Query: 263 GKVSEAEAMFNEMLEAGFEPNLF----VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +++AE +F++M EAG +PN++ V+ SL +C G+ R DV + + + G P+
Sbjct: 261 GDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRC-GQITRAHDV---FSEMIDAGCDPN 316
Query: 319 DRFCGCLLNVMTQTPKEE 336
L+ V + + E
Sbjct: 317 AVTFNSLMRVHVKAGRTE 334
>gi|297839237|ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333341|gb|EFH63759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 989
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 2/185 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI Y G +++YE MK GVKPN + Y +L++ + + +K M
Sbjct: 585 YAALIASYVRLGLLSDAVDLYEAMKKTGVKPNEVVYGSLINGFAESGMVEEAIQYFKLME 644
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G+ N SL++AY + E+ VY +MK+ G V N++L++CAD+G
Sbjct: 645 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSGGGPDVAASNSMLSLCADLGIVS 704
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA IF D++ C D +F++M+ + G + EA + EM E+G + +
Sbjct: 705 EAESIFNDLREKGTC--DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLRDCTSFNQV 762
Query: 291 IQCYG 295
+ CY
Sbjct: 763 LACYA 767
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 40/275 (14%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++ +IK YG A + L++++ MK G P+ TYN+L+ + +
Sbjct: 509 RNDVLEYNVMIKAYGKAKLHEKALSIFKGMKNQGTWPDECTYNSLIQMLAGVDLVDDAQR 568
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I EM D+G P TYA+L+ +Y R D + +Y MK+ G++ + +Y +L+ A
Sbjct: 569 ILAEMLDSGCKPGCKTYAALIASYVRLGLLSDAVDLYEAMKKTGVKPNEVVYGSLINGFA 628
Query: 225 DVGYTDEAFEIFEDMK------------------SSENC----------------QPDSW 250
+ G +EA + F+ M+ S C PD
Sbjct: 629 ESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSGGGPDVA 688
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+SM+++C+ G VSEAE++FN++ E G ++ +++ Y D+ + +
Sbjct: 689 ASNSMLSLCADLGIVSEAESIFNDLREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEM 747
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
E G+ D C V+ + G+L EC E
Sbjct: 748 RESGLLRD---CTSFNQVLACYAAD--GQLRECCE 777
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
Y + G + +++ YN ++ G+AK + +I+K M + G P+ TY SL++
Sbjct: 500 YGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSIFKGMKNQGTWPDECTYNSLIQMLAG 559
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+D + EM + G + Y L+A +G +A +++E MK + +P+
Sbjct: 560 VDLVDDAQRILAEMLDSGCKPGCKTYAALIASYVRLGLLSDAVDLYEAMKKT-GVKPNEV 618
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ S+I + G V EA F M E G + N VLTSLI+ Y K ++ R +++
Sbjct: 619 VYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 678
Query: 311 PELGITPD 318
+ G PD
Sbjct: 679 KDSGGGPD 686
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 146/339 (43%), Gaps = 44/339 (12%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ L+ AG+ + L Y ++ +G+ P+ +T+ +L + + K + + +
Sbjct: 371 DTKTYNILLSLHADAGDIEAALKYYRNIRKVGLFPDTVTHRAVLHILCQRKMVAEAEAVM 430
Query: 167 KEMTDNGLSPNWNTYASLLRAY------GRAR-----------------------YGEDT 197
EM N + + ++ +++ Y G+A+ Y E
Sbjct: 431 AEMDRNSIRIDEHSVPVIMQMYVNEGLVGQAKALFERFQLDCVLSSTTLAAVMDVYAEKG 490
Query: 198 LSV------YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
L V Y + G + V YN ++ ++A IF+ MK+ + PD T
Sbjct: 491 LWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSIFKGMKN-QGTWPDECT 549
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++S+I + + V +A+ + EML++G +P +LI Y + D V +
Sbjct: 550 YNSLIQMLAGVDLVDDAQRILAEMLDSGCKPGCKTYAALIASYVRLGLLSDAVDLYEAMK 609
Query: 312 ELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKK 370
+ G+ P++ G L+N ++ EE + + +E+ + ++V L + + +
Sbjct: 610 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYSKVGCLE 669
Query: 371 EATELFNSISK-----DVKKAYCNCLIDLCVNLNLLENA 404
EA +++ + DV A N ++ LC +L ++ A
Sbjct: 670 EARRVYDKMKDSGGGPDV--AASNSMLSLCADLGIVSEA 706
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 129/333 (38%), Gaps = 65/333 (19%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI LYG AG + N++ EM GV + +T+N ++ T G + +++ K+M
Sbjct: 305 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 364
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+SP+ TY LL + A E L YR +++ G+ + +L +
Sbjct: 365 EKGISPDTKTYNILLSLHADAGDIEAALKYYRNIRKVGLFPDTVTHRAVLHILCQRKMVA 424
Query: 231 EAFEIFEDMKSSE---------------------------------NCQPDSWTFSSMIT 257
EA + +M + +C S T ++++
Sbjct: 425 EAEAVMAEMDRNSIRIDEHSVPVIMQMYVNEGLVGQAKALFERFQLDCVLSSTTLAAVMD 484
Query: 258 ICSCRGKVSEAEAMF-NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ + +G EAE +F + G ++ +I+ YGKA+ + + + G
Sbjct: 485 VYAEKGLWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSIFKGMKNQGTW 544
Query: 317 PDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELF 376
PD+ C N + Q +L D+ D ++ E+
Sbjct: 545 PDE----CTYNSLIQ--------------------------MLAGVDLVDDAQRILAEML 574
Query: 377 NSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
+S K K Y LI V L LL +A L E
Sbjct: 575 DSGCKPGCKTYA-ALIASYVRLGLLSDAVDLYE 606
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 14/247 (5%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
EK D +F+T++ LY G D + V EEM+ G+ + ++N +L + +
Sbjct: 715 EKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLRDCTSFNQVLACYAADGQLRE 774
Query: 162 VKTIYKEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLS----VYREMKEKGM-QLSVTL 215
++ EM + L +W T+ +L + + ++ Y E K ++ TL
Sbjct: 775 CCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVAQLQTAYNEAKPLATPAITATL 834
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
++ + G A E +++ E + + ++++I S G + A + M
Sbjct: 835 FSAM-------GLYAYALESCQELTRDE-IPREHYAYNAVIYTYSASGDIDMALKTYMRM 886
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
E G EP++ L+ YGKA + V R +RL + P+ + + ++
Sbjct: 887 QEKGLEPDVVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPNQSLFKAVRDAYVSANRQ 946
Query: 336 ELGKLVE 342
+L +V+
Sbjct: 947 DLADVVK 953
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 4/205 (1%)
Query: 69 KTGSSPKSYIWVNPKSPRA-SKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFD 125
KTG P ++ + + A S + E++ E+ + N ++LIK Y G +
Sbjct: 610 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYSKVGCLE 669
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
VY++MK G P++ N++L + ++I+ ++ + G + + ++A+++
Sbjct: 670 EARRVYDKMKDSGGGPDVAASNSMLSLCADLGIVSEAESIFNDLREKG-TCDVISFATMM 728
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y ++ + V EM+E G+ T +N +LA A G E E+F +M
Sbjct: 729 YLYKGMGMLDEAIEVAEEMRESGLLRDCTSFNQVLACYAADGQLRECCELFHEMLVERKL 788
Query: 246 QPDSWTFSSMITICSCRGKVSEAEA 270
D TF ++ T+ G SEA A
Sbjct: 789 LLDWGTFKTLFTLLKKGGVPSEAVA 813
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN+I YN +L +GRA + +++ + EM NG+ P NTY L+ YG+A ++ L
Sbjct: 137 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 196
Query: 201 YREMKEK 207
+ M ++
Sbjct: 197 IKHMGQR 203
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ +I Y +G+ D L Y M+ G++P+++T L+ G+A VK ++ +
Sbjct: 862 AYNAVIYTYSASGDIDMALKTYMRMQEKGLEPDVVTQAYLVGIYGKAGMVEGVKRVHSRL 921
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T L PN + + ++ AY A + V +EM
Sbjct: 922 TFGELEPNQSLFKAVRDAYVSANRQDLADVVKKEM 956
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 24/245 (9%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ +++ G AG +D + EM GV P TY L+D G+A +
Sbjct: 137 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 196
Query: 166 YKEMTDNGLSPNWNTYASLLRAY------------------GRARYGEDTLSVYREMKEK 207
K M P+ T A+++R + G+ + L + +
Sbjct: 197 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVNLDDLDLDSIDDFPKN 256
Query: 208 G-MQLSVTLYNTLLAMCADVGY---TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
G Q V L L VG +++ SS + TF+++I + G
Sbjct: 257 GSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAG 316
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
++++A +F+EML++G + ++I G + L ++ E GI+PD +
Sbjct: 317 RLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 376
Query: 324 CLLNV 328
LL++
Sbjct: 377 ILLSL 381
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 116/225 (51%), Gaps = 6/225 (2%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+ + R ++ R P+ ++ LI LYG A L V+ EM++ KPN+ T+ L
Sbjct: 255 QKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTAL 314
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + + I++++ + GL P+ Y +L+ AY RA + ++ M+ G
Sbjct: 315 VNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGC 374
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ YN ++ G ++A +FE MK P + +++ S GKV++ E
Sbjct: 375 EPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRL-GITPTMKSHMLLLSAYSRAGKVAKCE 433
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKA---QRTDDVVRALNRLP 311
+ N+M ++G +P+ FVL S++ YG+ ++ ++V+ A+ + P
Sbjct: 434 EIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP 478
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
S L EK+ A K+ P+A ++ I G+ + ++E MK +P+ T
Sbjct: 216 SGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTAT 275
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L++ G+A + + ++ EM PN T+ +L+ A+ R E ++ +++
Sbjct: 276 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 335
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
E G++ V YN L+ + G+ A EIF M+ C+PD +++ M+ G
Sbjct: 336 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLH 394
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+A+A+F M G P + L+ Y +A + +N++ + GI PD +
Sbjct: 395 EDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSM 454
Query: 326 LNVMTQTPK-EELGKLVECVEKS 347
LN+ + + E++ +++ +EK
Sbjct: 455 LNLYGRLGQFEKMEEVLTAMEKG 477
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L+K Y T+G + V+ EM+ G P+ + YN +D + + + I++
Sbjct: 204 DTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFER 263
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + P+ TY L+ YG+A L V+ EM+ + + ++ + L+ A G
Sbjct: 264 MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGL 323
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A EIFE ++ + +PD + +++++ S G A +F+ M G EP+
Sbjct: 324 CEKAEEIFEQLQEA-GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYN 382
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
++ YG+A +D + LGITP + LL+ ++ GK+ +C E N
Sbjct: 383 IMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA-----GKVAKCEEIVN 437
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 7/222 (3%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R++K + + F+ L+ + G + ++E+++ G++P++ YN L++ RA P
Sbjct: 300 RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFP 359
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I+ M G P+ +Y ++ AYGRA ED +V+ MK G+ ++ + L
Sbjct: 360 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLL 419
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L+ + G + EI M S +PD++ +SM+ + G+ + E + M +
Sbjct: 420 LSAYSRAGKVAKCEEIVNQMHKS-GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP 478
Query: 280 FEPNLFVLTSLIQCYGKA---QRTDDVVRALNRLPELGITPD 318
+ ++ LI YG+A R +++ R+ LP + PD
Sbjct: 479 YPADISTYNILINIYGRAGFFARMEELFRS---LPARNLIPD 517
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++I YN L+D G+ + ++ Y E+ + P +TYA LL+AY + E +V
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 225
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ EM++ G S +YN + G T +A EIFE MK + CQP + T++ +I +
Sbjct: 226 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMK-RDRCQPSTATYTMLINLYG 284
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
K A +F+EM +PN+ T+L+ + + + +L E G+ PD
Sbjct: 285 KASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPD 342
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ ++ YG AG + V+E MK +G+ P M ++ LL RA + + + I
Sbjct: 377 DRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIV 436
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +G+ P+ S+L YGR E V M++ ++ YN L+ +
Sbjct: 437 NQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRA 496
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN--- 283
G+ E+F + + N PD T++S I S R + + +F EM++AG P+
Sbjct: 497 GFFARMEELFRSL-PARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGT 555
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNR 309
VL S + Q V+R +++
Sbjct: 556 AKVLLSACSNGDQIQEVTTVIRTMHK 581
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 14/197 (7%)
Query: 173 GLSPNWN------TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
GL W+ TY LL+A+ R+R + +VY EM G QL + YN LL A
Sbjct: 223 GLIKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKD 282
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D ++++F+DMK ++C PD +T++ MI + G+ E+ A+F EML G PNL
Sbjct: 283 EQLDRSYKVFKDMKL-KHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIA 341
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
++IQ K+ D + + + P++ +LNV+ + +LG+L E +E
Sbjct: 342 YNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVL--VAEGQLGRLDEVLEV 399
Query: 347 SN-----SKLGYVVKLL 358
SN S Y+V+ L
Sbjct: 400 SNKFINKSIYAYLVRTL 416
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +A+ ++++ G + + ++ G+ + + YN +L T+G+ K+ + +Y
Sbjct: 440 DRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLY 499
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M +G P+ TY L+ + GR ++ + V+ E++ + + YN+L+
Sbjct: 500 EKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKN 559
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA F +M+ + PD T+S++I KV A ++F+ M+ G PN+
Sbjct: 560 GDVDEAHMRFLEMQ-DKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVT 618
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C +A RT + V +L E G+TPD
Sbjct: 619 YNILLDCLERAGRTAETVDLYAKLREQGLTPD 650
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW + NA++ L++ + + + D NVY EM + G + ++ YN LLD + + ++
Sbjct: 226 KKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQL 285
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++K+M +P+ TY ++R G+ E++L+++ EM KG ++ YNT+
Sbjct: 286 DRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTM 345
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + G D+A +F +M + NC+P+ +T+S ++ + G++ +E+LE
Sbjct: 346 IQALSKSGMVDKAILLFCNMIKN-NCRPNEFTYSIILNVLVAEGQLGR----LDEVLEV 399
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI G G + V+EE+++ KP++I+YN+L++ +G+ + +
Sbjct: 510 DIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRF 569
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM D GL+P+ TY++L+ +G+ E S++ M +G ++ YN LL
Sbjct: 570 LEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERA 629
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFS 253
G T E +++ ++ + PDS T++
Sbjct: 630 GRTAETVDLYAKLR-EQGLTPDSITYA 655
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 22/298 (7%)
Query: 30 DDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNP----QYPHGKTGSSPK----SYIWVN 81
DD S S + Q SVSL ++S K +P Q+ H + PK ++ +
Sbjct: 111 DDRFSDLS-SYFQSLSVSLTPAEASEILKSLNSPDLALQFFHRCSSLCPKFRHDAFTYSR 169
Query: 82 PKSPRASKLKEKSYD------TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK 135
+ K D ++ ++ R + + LIK++ + + + C + +K
Sbjct: 170 ILLMLSHSSSSKRIDQVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGL---IK 226
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
++ N TY LL R++ + +Y EM NG + Y LL A + +
Sbjct: 227 KWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLD 286
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ V+++MK K Y ++ M +G +E+ +FE+M ++ C P+ +++M
Sbjct: 287 RSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEML-TKGCTPNLIAYNTM 345
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLF---VLTSLIQCYGKAQRTDDVVRALNRL 310
I S G V +A +F M++ PN F ++ +++ G+ R D+V+ N+
Sbjct: 346 IQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKF 403
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 116/266 (43%), Gaps = 35/266 (13%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM------GRAKRP 159
PN A++T+I+ +G D + ++ M +PN TY+ +L+ + GR
Sbjct: 337 PNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEV 396
Query: 160 WQV------KTIY----KEMTDNGLSPN--------W--------NTYASLLRAYGRARY 193
+V K+IY + ++ G S W + Y S+L + R
Sbjct: 397 LEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGK 456
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ + + ++ EKG+ +YNT+L+ + +++E MK + PD +T++
Sbjct: 457 TVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQ-DGPFPDIFTYN 515
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I+ GKV EA +F E+ + +P++ SLI C GK D+ + +
Sbjct: 516 ILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDK 575
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGK 339
G+ PD L+ +T K E+ +
Sbjct: 576 GLNPDVVTYSTLIECFGKTDKVEMAR 601
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI+ +G + ++++ M G PN++TYN LLD + RA R + +Y
Sbjct: 580 DVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLY 639
Query: 167 KEMTDNGLSPNWNTYASLLR 186
++ + GL+P+ TYA L R
Sbjct: 640 AKLREQGLTPDSITYAILDR 659
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EK + P+ A++ LI+ + G + +MK GV P++ TYN L+ GR
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I KEM DNG PN +Y +L+ + + V R+M+++G+ V +YN L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ C G ++AF ++M + + + T++++I S GK+SEAE + E+ G
Sbjct: 536 IDGCCSKGKIEDAFRFSKEM-LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+P++F SLI YG A + + GI P
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 3/208 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y AGN + V E MKA ++P++IT+N LL + +A + + KEM
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT 229
D G P+ T++ L Y E L VY + G++++ + LL A+C + G
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE-GKI 370
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
++A EI + ++ P+ +++MI +G + A M + G +P+
Sbjct: 371 EKAEEIL-GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITP 317
LI+ + + ++ + +N++ G++P
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSP 457
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 96 DTRARNEKWRIDPNAFSTLIK--------LYGTA-------GNFDGCLNVYEEMKAIGVK 140
D + +++R+ N F +++ +YG A + L ++ MK +
Sbjct: 152 DHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIY 211
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++ YN L+D + + KR + ++ EM L P+ TY +L+ Y +A E + V
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
MK ++ S+ +NTLL G ++A + ++MK PD++TFS + S
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL-GFVPDAFTFSILFDGYS 330
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
K A ++ +++G + N + + L+ K + + L R G+ P++
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ F+ +LI YG AGN C+ +YEEMK G+KP + TY+ LL ++ + +
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTE 653
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM+ L P+ Y +L Y E ++ ++M EK + L T YN+L+
Sbjct: 654 RLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGF 280
VG E + ++M + E +P++ T++ ++ C + +S A + EM E GF
Sbjct: 711 LKVGKLCEVRSLIDEMNARE-MEPEADTYNIIVKGHCEVKDYMS-AYVWYREMQEKGF 766
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 101/237 (42%), Gaps = 1/237 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RNE ++ + L+ F +NV+ + +P+ Y + +
Sbjct: 136 RNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDV 195
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ M + + P+ Y L+ + + D ++ EM + + S+ YNTL
Sbjct: 196 GKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G +++F++ E MK +++ +P TF++++ G V +AE + EM + G
Sbjct: 256 IDGYCKAGNPEKSFKVRERMK-ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
F P+ F + L Y ++ + + + G+ + C LLN + + K E
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 56/115 (48%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ ++ Y G+ + N+ ++M + + TYN+L+ + + +V+++
Sbjct: 664 DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
EM + P +TY +++ + + YREM+EKG L V + N L++
Sbjct: 724 DEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 6/286 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++WR P+A +++LI + AG + +N+ ++M + P+ TYNN+++ G A
Sbjct: 182 QEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNW 241
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT NG+ P+ T+ +L A+ ++ + MK + N +
Sbjct: 242 KKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIV 301
Query: 220 LAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ G EA E+ M+ C PD T++S++ GKV + +A+F+ M+
Sbjct: 302 IHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAE 361
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G +PN+ +L+ Y D + L + G+ PD LLN ++ + E
Sbjct: 362 GVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKA 421
Query: 339 KLVECVEKSNSKLGYVVKL--LLEEQDIEGDFKKEATELFNSISKD 382
+ + NS +V L++ G F KEA L + + KD
Sbjct: 422 REAFKEMRKNSCRPNIVSYNALIDAYGSAGMF-KEAISLLHEMEKD 466
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 36/267 (13%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +++TL+ YG +G + ++EM+ +PN+++YN L+D G A + +
Sbjct: 399 RPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAIS 458
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ EM +G+ P+ + ++LL A GR R ++ K +G++L++ YN+ +
Sbjct: 459 LLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYL 518
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT--------------------------- 257
+ G +A E++ M +S N PD+ T++ +I+
Sbjct: 519 NFGDYGKALELYAVMMAS-NVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTK 577
Query: 258 ------ICSC--RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
ICS +GK++EAE+ F+ M E+G P++ T++I+ Y +
Sbjct: 578 EVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKE 637
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEE 336
+ + PD C L+ + + + E
Sbjct: 638 MEGNTVQPDAIICSSLMEALNRGSQHE 664
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 38/242 (15%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++ LI YG+AG F +++ EM+ G+ P++++ + LL GR ++ ++ TI
Sbjct: 435 PNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTI 494
Query: 166 YKEMTDNGLSPNWNTYASLLRAY-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ G+ N Y S + +Y YG+ L +Y M + YN L++
Sbjct: 495 LEAAKSRGIKLNIVCYNSGIGSYLNFGDYGK-ALELYAVMMASNVNPDAVTYNILISGLC 553
Query: 225 DVGYTDEAFEIFEDM----------------------------------KSSENCQPDSW 250
VG E+ + FEDM C PD
Sbjct: 554 KVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVL 613
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+++MI + G A +F EM +P+ + +SL++ + + + V++ + +
Sbjct: 614 TYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELM 673
Query: 311 PE 312
E
Sbjct: 674 KE 675
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A++ +++ +++ I Y G++ L +Y M A V P+ +TYN L+ + + +
Sbjct: 498 AKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGK 557
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ +++M D + Y+SL+ +Y + + S + MKE G V Y
Sbjct: 558 YAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTA 617
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
++ D G A+++F++M+ + QPD+ SS++ + RG E E+++
Sbjct: 618 MIEAYNDDGSWRNAWDLFKEMEGN-TVQPDAIICSSLMEALN-RGSQHERVLQLMELMK 674
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 83/185 (44%), Gaps = 1/185 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I+ Y G++ ++++EM+ V+P+ I ++L++ + R + +V +
Sbjct: 611 DVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLM 670
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + + N Y ++ + R + + + +SV N LL
Sbjct: 671 ELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKC 730
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T+ ++F M SS + S T++ ++ GK + + M +AG P L++
Sbjct: 731 GKTECMMKLFYKMMSSCSTVGVS-TYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYM 789
Query: 287 LTSLI 291
+++
Sbjct: 790 YQNVL 794
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +A ++++ +AG +++ ++ G+ + I YN + +GR K+ + +Y
Sbjct: 402 DKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLY 461
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M +G P+ TY L+ ++GRA + + + E++ + V YN+L+
Sbjct: 462 EKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKN 521
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA F++M+ + PD T+S++I KV A +F+EML PNL
Sbjct: 522 GDVDEAHMRFKEMQ-EKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLIT 580
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C ++ RT + V +L + G+TPD
Sbjct: 581 YNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 612
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 17/267 (6%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGN---FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
N +R + ++ L + + N FD ++ +M V+ ++ T N L+ G +
Sbjct: 120 NPSFRHESFTYNRLFLILSKSTNPARFDQARSLLHDMDRRAVRGSISTVNILVGFFGAGE 179
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ K+ L N TY LL+AY RA VY +M G +L + YN
Sbjct: 180 DLERCVSLVKKW---DLRLNAYTYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYN 236
Query: 218 TLLAMCADVGYTDE---AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LL D DE ++++FEDMK +C+PD +T++ MI + K EA A+F
Sbjct: 237 MLL----DALAKDEKVCSYKVFEDMKR-RHCEPDVFTYTIMIRMTGKSSKTDEALALFQA 291
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
ML G PNL ++I+ K + D V +++ E I P++ +LN++ K
Sbjct: 292 MLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGK 351
Query: 335 -EELGKLVECVEKSNSK--LGYVVKLL 358
+L +V+ +K +K Y V+ L
Sbjct: 352 LNKLDNIVDISKKYINKQIYAYFVRTL 378
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI +G AG D + +EE++ KP++I+YN+L++ +G+ + +
Sbjct: 472 DIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRF 531
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + GL+P+ TY++L+ +G+ E ++ EM + ++ YN LL
Sbjct: 532 KEMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERS 591
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
G T EA +++ +K + PDS T++ +
Sbjct: 592 GRTAEAVDLYAKLK-QQGLTPDSITYAVL 619
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 35/265 (13%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN------------NLLDTM 153
PN ++T+I+ D + ++ +M ++PN TY+ N LD +
Sbjct: 299 PNLIGYNTMIEALAKGRMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGKLNKLDNI 358
Query: 154 GRAKRPWQVKTIY----KEMTDNGLSPN--------WNTY--------ASLLRAYGRARY 193
+ + K IY + ++ G + WN + S+L + A
Sbjct: 359 VDISKKYINKQIYAYFVRTLSKVGHASEAHRLFCNMWNFHDKGDKDACMSMLESLCSAGK 418
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ + + ++ EKG+ +YNT+ + +++E MK + PD +T++
Sbjct: 419 MTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQ-DGPPPDIFTYN 477
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I+ G+V A F E+ + +P++ SLI C GK D+ + E
Sbjct: 478 ILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEK 537
Query: 314 GITPDDRFCGCLLNVMTQTPKEELG 338
G+ PD L+ +T K E+
Sbjct: 538 GLNPDVVTYSTLIECFGKTDKVEMA 562
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI+ +G + +++EM A PN+ITYN LLD + R+ R + +Y
Sbjct: 542 DVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAVDLY 601
Query: 167 KEMTDNGLSPNWNTYASLLR----AYGRARY 193
++ GL+P+ TYA L R +G+ R+
Sbjct: 602 AKLKQQGLTPDSITYAVLERLQSGGHGKLRF 632
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N + D ++++LI G G+ D ++EM+ G+ P+++TY+ L++ G+ +
Sbjct: 501 NSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVE 560
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ EM +PN TY LL R+ + + +Y ++K++G+ Y L
Sbjct: 561 MACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 619
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ +D ++TLI G + + EM G++P+ TYN L+ M R + +
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ E L PN TY ++ Y +A E+ ++ E+ + ++L+ +YNTL+
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G T EAF++ +DM+ S+ P + T+SS+I G++ +A+ + +EM + G PN
Sbjct: 642 CRNGNTVEAFKLHDDMR-SKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPN 700
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ T+LI Y K + D VV L + I P+
Sbjct: 701 VVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 735
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 111/234 (47%), Gaps = 1/234 (0%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
+A++L++ + + D FST I + G + + ++ +M+ +GV PN++T
Sbjct: 224 KANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVT 283
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YNNL+ + + + ++M +G++ TY+ L+ + + SV +E
Sbjct: 284 YNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL 343
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
EKG + +YNTL+ +G +A I DM S+ P+S T +S+I G++
Sbjct: 344 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM-VSKGINPNSVTLNSIIQGFCKIGQM 402
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+AE + EML GF N T++I R + +R L + + P+D
Sbjct: 403 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPND 456
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ I+P AF+T+I F+ L EM ++PN L+ + + +
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + + G N T +L+ + ++ + + ++M E+G L YNTL++ C
Sbjct: 477 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 536
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +E F++ +M + +PD++T++ +I GK+ EA ++NE PN
Sbjct: 537 CKEGKVEEGFKLRGEM-VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 595
Query: 284 LFVLTSLIQCYGKAQRTDD 302
++ +I Y KA + ++
Sbjct: 596 VYTYGVMIDGYCKADKIEE 614
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 114/287 (39%), Gaps = 37/287 (12%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLK-EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFD 125
+ G SP Y++ + K E + EK + PN ++ LI GN D
Sbjct: 239 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 298
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
E+M GV +ITY+ L++ + + ++ + ++ KE + G +PN Y +L+
Sbjct: 299 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 358
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS--- 242
Y + D L + +M KG+ + N+++ +G ++A I E+M S
Sbjct: 359 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 418
Query: 243 -------------------------------ENCQPDSWTFSSMITICSCRGKVSEAEAM 271
N +P+ ++++ GK S+A +
Sbjct: 419 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 478
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +LE GF NL +LI K + VR L ++ E G D
Sbjct: 479 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 525
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TLI Y GN L + +M + G+ PN +T N+++ + + Q + I
Sbjct: 349 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECI 408
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCA 224
+EM G S N + +++ E L REM + M+ + L TL+ +C
Sbjct: 409 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 468
Query: 225 DVGYTDEA---FEIFE---------------DMKSSENCQP---------------DSWT 251
+ ++D F + E + + N Q D T
Sbjct: 469 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKIT 528
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I+ C GKV E + EM++ G EP+ F LI + + D+ V N
Sbjct: 529 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 588
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEELG-KLVECVEKSNSKLGYVV 355
+ P+ G +++ + K E G KL + N +L VV
Sbjct: 589 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 633
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A K++E + T + ++ ++TLI+ Y GN ++++M++ G+ P
Sbjct: 608 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 667
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY++L+ M R K + EM GL PN Y +L+ Y + + ++V +EM
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 727
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ + Y ++ + G A ++ +M + PD+ T++ + GK
Sbjct: 728 SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM-VGKGIVPDTVTYNVLTNGFCKEGK 786
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
+ E + + M + G + T+L+
Sbjct: 787 IEEGFKICDYMSQEGLPLDEITYTTLVH 814
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ + V+R + KG+ +V LL+ ++++ +FE M+ + PD + FS+
Sbjct: 194 RNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR--QGVSPDVYLFST 251
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
I GKV +A +F +M + G PN+ +LI K D+ R ++ + G
Sbjct: 252 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 311
Query: 315 I 315
+
Sbjct: 312 V 312
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 141/310 (45%), Gaps = 21/310 (6%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +S L++ Y +G + V+E+M G+KP++I + L+D + + + +
Sbjct: 189 VQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAA 248
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M GL PN TY L+ + + + L++ +EM +KG+ V YNTL+A
Sbjct: 249 KVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGL 308
Query: 224 ADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ V DEA E+M + +PD TF+S+I G++++A + M E G
Sbjct: 309 SGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMC 368
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPEL---GITPDDRFCGCLLNVMTQTPKEELGK 339
NL LI G R V A+N + EL G+ PD L+N ++ + + +
Sbjct: 369 NLVTYNYLI---GGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAE 425
Query: 340 LVECVEKSN---SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCV 396
C + ++L + + LL + + A LFN + K NC +D
Sbjct: 426 KFLCTMRQRGIKAELFHYIPLLAAM--CQQGMMERAMGLFNEMDK-------NCGLDAIA 476
Query: 397 NLNLLENACK 406
++ ACK
Sbjct: 477 YSTMIHGACK 486
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 33/260 (12%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+++I G + V E M G N++TYN L+ R + +
Sbjct: 334 DVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLM 393
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ +GL P+ TY+ L+ + + + M+++G++ + Y LLA
Sbjct: 394 DELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQ 453
Query: 227 GYTDEAFEIFE------------------------DMKS---------SENCQPDSWTFS 253
G + A +F DMK+ E PD+ T+S
Sbjct: 454 GMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYS 513
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I + + G + EAE + +M +GF P++ V SLI+ Y +TD V++ ++ +
Sbjct: 514 MLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAK 573
Query: 314 GITPDDRFCGCLLNVMTQTP 333
+ D + ++ + QTP
Sbjct: 574 NVAFDPKIISTIIRLPQQTP 593
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 3/186 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++T+++ + + + M+A GV+ +++TY L+ + A +
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM +G+ PN Y+ LLR Y R+ +D V+ +M +G++ V ++ L+
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G T +A ++ +DM +P+ T++ +I G V EA + EM + G P++
Sbjct: 241 EGKTGKAAKV-KDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299
Query: 286 VLTSLI 291
+LI
Sbjct: 300 TYNTLI 305
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 1/179 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+PN ++Y ++ + ++R + + + M +G+ + TY +L+R A + L
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
+ EM G+Q +V +Y+ LL G + ++FEDM S +PD F+ +I
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDM-SRRGIKPDVIMFTGLIDDL 238
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GK +A + + M++ G EPN+ LI K + + + + G+ PD
Sbjct: 239 CKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPD 297
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 57/115 (49%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D A+ST+I +G+ + ++M G+ P+ +TY+ L++ + + + +
Sbjct: 472 LDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERV 531
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
K+MT +G P+ + SL++ Y + L + EM+ K + + +T++
Sbjct: 532 LKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586
>gi|410110117|gb|AFV61138.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hermannioides]
Length = 382
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 138 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 197
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 198 KANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 258 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 312
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ V +I K ++ +VV +++ LG PD +LN
Sbjct: 313 VKXITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 359
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 73 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 132
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 133 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 192
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 193 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQI 251
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 285
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 182
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 183 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLR 242
Query: 312 ELGITPD 318
G+ D
Sbjct: 243 SSGVEID 249
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+S++ +K G + YN ++ + EA + +MK++ P++ ++S+++
Sbjct: 24 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTA-GVMPNTTSYSTLL 82
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
T+ K EA ++F+EM E +L +I YG+ + + + ++GI
Sbjct: 83 TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 142
Query: 317 PDDRFCGCLLNV 328
P+ LL V
Sbjct: 143 PNVVSYNTLLRV 154
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+ LY+ L+ + + +A IF +K S PD +++MI + EA ++
Sbjct: 5 LVLYSNLIELSRKLCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+EM AG PN ++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 122
>gi|410110143|gb|AFV61151.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
velutina]
Length = 382
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 138 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 197
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 198 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 257
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 258 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGE 312
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V ++ K ++ +VV +++ LG PD +LN
Sbjct: 313 VKDITVFERMVHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLN 359
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 73 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 132
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 133 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 192
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 193 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 251
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 252 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 285
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 182
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 183 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 242
Query: 312 ELGITPD 318
G+ D
Sbjct: 243 SSGVEID 249
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMVHLL 326
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G
Sbjct: 327 SKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 4/238 (1%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
+SP S L + S D + R+ PN F+ L+ + + G L M+ G+
Sbjct: 183 RSP--STLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLS 240
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+ +TYN LL+ R + + + M +G++P TY +L+ A+ R + + V
Sbjct: 241 PDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKV 300
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
M G + + YN L G DEAF + ++M+ PD T+++++ C
Sbjct: 301 VESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACF 360
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+A + EM + G +P L +++ K + ++ + L ++ E G+ PD
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 140/298 (46%), Gaps = 14/298 (4%)
Query: 121 AGNFDGCLNVYEEMKAIGVK-PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
AG D + +EM+ + P+++TYN L+D + + + +EM D G+ P
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
T+ ++++ + E+ L ++ E+G+ V YNTL+ G +AF + ++M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Query: 240 KSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+ + D++T ++++ +C + + +AE + + + GF P+ +++ Y K
Sbjct: 446 -VGKGLKMDTFTLNTVLYNLCKMK-RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELGKLVECVEKS----NSKLG 352
+ +R +++ E + P L+ + + KE + KL E VEK +
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYN 563
Query: 353 YVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID-LCVNLNLLENACKLLE 409
++ +E D+E F+ + NS DV CN L++ LC++ L+ A KL E
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDV--VTCNTLMNGLCLH-GKLDKALKLFE 618
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ T++ Y N + L ++++M + P++ TYN L+ + R +R +
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ + GL P+ TY ++ AY + E+ + +M E + V NTL+
Sbjct: 548 NELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A ++FE + + D T++++I G V A F++M G +P+ F
Sbjct: 608 GKLDKALKLFESW-VEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELG 314
++ +A R+++ L++L + G
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y AGN + +EM G+K + T N +L + + KR + +
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ +Y +++ AY + E L ++ +M E+ + S++ YNTL+ +
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + ++ + PD T++ +I G + A N+M+E F+P++ +L
Sbjct: 542 EAIDKLNEL-VEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600
Query: 291 I 291
+
Sbjct: 601 M 601
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 4/184 (2%)
Query: 138 GVKPNMITYNNLLDTMGRAKR--PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
GV+P++ N +L + R+ P +++ + + L PN T+ L+ +
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
D L+ M+ G+ YNTLL G EA + MK + P T++++
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKR-DGIAPTQPTYNTL 284
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
++ + G + +A + M GFEP+L L +A + D+ R + + L
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLST 344
Query: 316 T-PD 318
PD
Sbjct: 345 ALPD 348
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 39/69 (56%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D ++TLI+ G+ D L+ +++M+ G++P+ TYN +L + A R +
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685
Query: 165 IYKEMTDNG 173
+ ++ D+G
Sbjct: 686 MLHKLADSG 694
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 119/230 (51%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I + G+ D + Y EM + PN++TYN+++ + +A+ + +
Sbjct: 87 DVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVL 146
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M +G+ P+ TY S++ + + ++ + ++M+ G++ V YN+L+
Sbjct: 147 TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKN 206
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +IF+ M + +P+ T+ +++ + +G + E + + M+ G PN +V
Sbjct: 207 GRCTEARKIFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 265
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ L+ Y K ++ ++ + +++ + G+ P+ G ++ ++ ++ + E
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 315
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 7/259 (2%)
Query: 96 DTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
D RN I PN FS L+ Y + + V+ +M+ G+ PN +TY ++ +
Sbjct: 252 DLMVRNG---IHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGIL 308
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
++ R +++M D GLSP Y SL+ E + EM ++G+ L+
Sbjct: 309 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 368
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+N+++ G E+ ++F D+ +PD T+S++I GK+ EA +
Sbjct: 369 IFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 427
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
M+ G +P+ ++LI Y K R D + + G++PD +L + QT
Sbjct: 428 SMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTR 487
Query: 334 KEELGK-LVECVEKSNSKL 351
+ K L + KS +L
Sbjct: 488 RTAAAKELYVGITKSGRQL 506
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 119/253 (47%), Gaps = 6/253 (2%)
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
P T +S Y+ N + A K+ +D+ + + + + TL++ Y T G
Sbjct: 191 PDVVTYNSLMDYLCKNGRCTEARKI----FDSMTK-RGLKPEITTYGTLLQGYATKGALV 245
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + M G+ PN ++ L+ + ++ + ++ +M GL+PN TY +++
Sbjct: 246 EMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVI 305
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
++ ED + + +M ++G+ +YN+L+ + A E+ +M C
Sbjct: 306 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 365
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
++ F+S+I G+V E+E +F+ M+ G +P++ ++LI Y A + D+ +
Sbjct: 366 L-NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 424
Query: 306 ALNRLPELGITPD 318
L + +G+ PD
Sbjct: 425 LLASMVSVGMKPD 437
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
EK +D R + D +STLI Y AG D + M ++G+KP+ +TY+ L++
Sbjct: 388 EKLFDLMVRI-GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R +++EM +G+SP+ TY +L+ + R +Y + + G QL
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL 506
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ YN +L TD+A +F+++ + + ++ TF+ MI G+ EA+ +
Sbjct: 507 ELSTYNIILHGLCKNKLTDDALRMFQNL-CLMDLKLEARTFNIMIDALLKVGRNDEAKDL 565
Query: 272 FNEMLEAGFEPN 283
F G PN
Sbjct: 566 FVAFSSNGLVPN 577
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG--LSPNWNTYASLLR 186
+V++E+ G+ P++ +YN LL+ + R + + M D+G P+ +Y++++
Sbjct: 38 HVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN 96
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
+ + + T S Y EM ++ + +V YN+++A D+A E+ M S
Sbjct: 97 GFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVM 155
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD T++S++ G+ EA +M G EP++ SL+ K R + +
Sbjct: 156 PDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKI 215
Query: 307 LNRLPELGITPDDRFCGCLL 326
+ + + G+ P+ G LL
Sbjct: 216 FDSMTKRGLKPEITTYGTLL 235
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 11/262 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+++I + G +++ M IGVKP++ITY+ L+D A + + + M
Sbjct: 371 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 430
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ TY++L+ Y + +D L ++REM+ G+ + YN +L T
Sbjct: 431 SVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 490
Query: 231 EAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVS-EAEAMFNEMLEAGFEPNLFVLT 288
A E++ + KS + ++ ++I C+ K++ +A MF + +
Sbjct: 491 AAKELYVGITKSGRQLELSTY---NIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFN 547
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFCGCLLNVMTQTPKEELGKLVECVEKS 347
+I K R D+ G+ P+ + N++ Q EEL +L +E +
Sbjct: 548 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 607
Query: 348 -----NSKLGYVVKLLLEEQDI 364
+ L ++V+ LL+ +I
Sbjct: 608 GCTVDSGMLNFIVRELLQRGEI 629
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS-SENCQPDSWTFS 253
ED V+ E+ +G+ V YN LL D + EA E+ M +C PD ++S
Sbjct: 34 EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I G + + + +NEML+ PN+ S+I KAQ D + L + +
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 314 GITPD 318
G+ PD
Sbjct: 153 GVMPD 157
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 105/198 (53%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++ + G +P +ITY LL + R KR + ++ ++ NGL P+ + +++ A+
Sbjct: 93 IFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFS 152
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ + ++R+MK++G + + + +NTL+ + G +E ++ + M EN +P+
Sbjct: 153 ESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPND 212
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
TF+S+I + +++EA + +M +G +P++ +L + Y + T +
Sbjct: 213 RTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILE 272
Query: 310 LPELGITPDDRFCGCLLN 327
+ + P++R CG ++N
Sbjct: 273 MQNNRVMPNERTCGIIIN 290
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 111/229 (48%), Gaps = 7/229 (3%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K D ++ E + + F++LI+ + NV +M A G++P+++TYN L
Sbjct: 197 KLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARA 256
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ + + + EM +N + PN T ++ Y + +D L M+ G+ +
Sbjct: 257 YAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPN 316
Query: 213 VTLYNTLLAMCADVGYT---DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ ++N+L+ D+ T DEA + E+ +PD TFS+++ S G + + +
Sbjct: 317 LVIFNSLIKGFLDITDTDGVDEALTLMEEF----GVKPDVVTFSTIMNAWSSVGLMDKCQ 372
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F++M++AG EP++ + L + Y +A + L + + G+ P+
Sbjct: 373 EIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPN 421
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ F ++ +++ G+KP+ + +N +++ + + I+++M
Sbjct: 109 YTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMK 168
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLLAMCADVGYT 229
D G P +T+ +L++ YG A E+ L + M +E+ ++ + +N+L+ +
Sbjct: 169 DRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRI 228
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA+ + M +S QPD T++++ + G+ S AE M EM PN
Sbjct: 229 TEAWNVVYKMAAS-GLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGI 287
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
+I Y K + D +R L R+ G+ P+
Sbjct: 288 IINGYCKEGKMKDALRFLYRMRNYGVHPN 316
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Query: 105 RIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R+ PN + +I Y G L M+ GV PN++ +N+L+ V
Sbjct: 277 RVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGV 336
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
M + G+ P+ T+++++ A+ + ++ +M + G++ + ++ L
Sbjct: 337 DEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKG 396
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G ++A + M S QP+ F+++I+ GK+ A ++ +M E G P
Sbjct: 397 YVRAGEPEKAESLLTAMGKS-GVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICP 455
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
NL +LI YG+A+ L + + G+ P
Sbjct: 456 NLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAP 490
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 98 RARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
R RN + + PN F++LIK + + DG M+ GVKP+++T++ +++
Sbjct: 307 RMRN--YGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSS 364
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ + I+ +M G+ P+ + ++ L + Y RA E S+ M + G+Q +V +
Sbjct: 365 VGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVI 424
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+ T+++ G + A ++E M C P+ TF ++I + +AE + M
Sbjct: 425 FTTIISGWCSAGKMEYASRVYEKMCEMGIC-PNLKTFETLIWGYGEAKEPQKAEELLQIM 483
Query: 276 LEAGFEP 282
+ G P
Sbjct: 484 EQKGVAP 490
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 42/80 (52%)
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ ++ I +GK EA+ +FN + E G P L T+L+ + +R + +++L +
Sbjct: 75 TKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEK 134
Query: 313 LGITPDDRFCGCLLNVMTQT 332
G+ PD F ++N +++
Sbjct: 135 NGLKPDSVFFNAMINAFSES 154
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++TLI G + + EM G++P+ TYN L+ M R + + +
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E L PN TY ++ Y +A E+ ++ E+ + ++L+ +YNTL+
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 710
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G T EAF++ +DM+ S+ P + T+SS+I G++ +A+ + +EM + G PN+
Sbjct: 711 NGNTVEAFKLHDDMR-SKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVV 769
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+LI Y K + D VV L + I P+
Sbjct: 770 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 802
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 6/260 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
+A++L++ + + D FST I + G + + ++ +M+ +GV PN++T
Sbjct: 291 KANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVT 350
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YNNL+ + + + ++M +G++ TY+ L+ + + SV +E
Sbjct: 351 YNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL 410
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
EKG + +YNTL+ +G +A I DM S+ P+S T +S+I G++
Sbjct: 411 EKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM-VSKGINPNSVTLNSIIQGFCKIGQM 469
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+AE + EML GF N T++I R + +R L + + P+D G L
Sbjct: 470 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPND---GLL 526
Query: 326 LNVMTQTPKEELGKLVECVE 345
++ KE GK + VE
Sbjct: 527 TTLVGGLCKE--GKHSDAVE 544
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ I+P AF+T+I F+ L EM ++PN L+ + + +
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + + G N T +L+ + ++ + + ++M E+G L YNTL++ C
Sbjct: 544 ELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGC 603
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +E F++ +M + +PD++T++ +I GK+ EA ++NE PN
Sbjct: 604 CKEGKVEEGFKLRGEM-VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 662
Query: 284 LFVLTSLIQCYGKAQRTDD 302
++ +I Y KA + ++
Sbjct: 663 VYTYGVMIDGYCKADKIEE 681
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 114/287 (39%), Gaps = 37/287 (12%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLK-EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFD 125
+ G SP Y++ + K E + EK + PN ++ LI GN D
Sbjct: 306 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 365
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
E+M GV +ITY+ L++ + + ++ + ++ KE + G +PN Y +L+
Sbjct: 366 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 425
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS--- 242
Y + D L + +M KG+ + N+++ +G ++A I E+M S
Sbjct: 426 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 485
Query: 243 -------------------------------ENCQPDSWTFSSMITICSCRGKVSEAEAM 271
N +P+ ++++ GK S+A +
Sbjct: 486 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 545
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +LE GF NL +LI K + VR L ++ E G D
Sbjct: 546 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 592
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TLI Y GN L + +M + G+ PN +T N+++ + + Q + I
Sbjct: 416 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECI 475
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCA 224
+EM G S N + +++ E L REM + M+ + L TL+ +C
Sbjct: 476 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 535
Query: 225 DVGYTDEA---FEIFED---------------MKSSENCQP---------------DSWT 251
+ ++D F + E + + N Q D T
Sbjct: 536 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKIT 595
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I+ C GKV E + EM++ G EP+ F LI + + D+ V N
Sbjct: 596 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 655
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEELG-KLVECVEKSNSKLGYVV 355
+ P+ G +++ + K E G KL + N +L VV
Sbjct: 656 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 700
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + +TL+ G + ++ + G N++T N L+ + + +
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ K+M + G + TY +L+ + E+ + EM ++G++ YN L+
Sbjct: 580 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMC 639
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G DEA ++ + K S + P+ +T+ MI K+ E E +F E+L E N
Sbjct: 640 RIGKLDEAVNLWNECK-SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 698
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
V +LI+ Y + T + + + + GI P L++ M + E K
Sbjct: 699 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 753
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 92/203 (45%), Gaps = 4/203 (1%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A K++E + T + ++ ++TLI+ Y GN ++++M++ G+ P
Sbjct: 675 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 734
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY++L+ M R K + EM GL PN Y +L+ Y + + ++V +EM
Sbjct: 735 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 794
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ + Y ++ + G A ++ +M + PD+ T++ + GK
Sbjct: 795 SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM-VGKGIVPDTVTYNVLTNGFCKEGK 853
Query: 265 VSEAEAMFNEMLEAGFEPNLFVL 287
+ E + + + GF LF++
Sbjct: 854 IEEGKLLAED--GVGFNSPLFLI 874
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ + V+R + KG+ +V LL+ ++++ +FE M+ + PD + FS+
Sbjct: 261 RNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR--QGVSPDVYLFST 318
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
I GKV +A +F +M + G PN+ +LI K D+ R ++ + G
Sbjct: 319 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 378
Query: 315 I 315
+
Sbjct: 379 V 379
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 122/254 (48%), Gaps = 4/254 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ +I + D N ++EM+ G+ PN++T+N L+D + + + + +
Sbjct: 464 SYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVML 523
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
++G P+ T++S++ RA+ ED L + EM G+ + YN L+ +G
Sbjct: 524 LEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDV 583
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ ++ M+ ++ PD ++F+++I GKV +A+ +F+ ML G P+ + +
Sbjct: 584 PRSMKLLRKMQ-TDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVA 642
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
I+ + ++ R ++ + G PD C +L+ + + + E + + K+ S
Sbjct: 643 FIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQK---IAKTCS 699
Query: 350 KLGYVVKLLLEEQD 363
+ G +V +D
Sbjct: 700 EWGILVNFAAISED 713
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
IG KP+ T+N ++ + + +V I + G+ ++TY +L++A A +
Sbjct: 386 IGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTE 445
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ +M + G+ +V YN ++ D+A F++M+ + P+ TF+++I
Sbjct: 446 GNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQ-YKGIPPNLVTFNTLI 504
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G++ ++ + +LE GF+P++F +S+I +A++ +D + + + G++
Sbjct: 505 DGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLS 564
Query: 317 PD 318
P+
Sbjct: 565 PN 566
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ K++ +G N L+ ++GR + ++ ++ G+ S LYN ++
Sbjct: 169 LLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALV 228
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D A+ F+ M S++NC+PD +T++ +I G V EA + +M G+ PN+
Sbjct: 229 KSNSLDLAYLKFQQM-SADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNV 287
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
F T LI + A++ D+ R L + ++P +
Sbjct: 288 FTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSE 322
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
N+ + G+K TY L+ + A + + + +M +GL N +Y ++ +
Sbjct: 413 NILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCF 472
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ + + ++EM+ KG+ ++ +NTL+ G ++ ++ M +PD
Sbjct: 473 CKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLV-MLLEHGFKPD 531
Query: 249 SWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+TFSS+I CR K + +A F+EM+ G PN LI ++ L
Sbjct: 532 IFTFSSIID-GLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLL 590
Query: 308 NRLPELGITPD 318
++ GI PD
Sbjct: 591 RKMQTDGINPD 601
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 92/248 (37%), Gaps = 38/248 (15%)
Query: 108 PNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ F+ I ++G +G D L + ++M+ +G PN+ TY L+D AK+ + +
Sbjct: 250 PDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRV 309
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +SP+ T S + R + E E+ L +TLL +
Sbjct: 310 LETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSS 369
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFS-------------------------------- 253
EA + + + +PDS TF+
Sbjct: 370 KNMAREAGALLKKFGKIGH-KPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFS 428
Query: 254 ---SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
++I GKV+E FN+M++ G N+ +I C+ K D +
Sbjct: 429 TYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEM 488
Query: 311 PELGITPD 318
GI P+
Sbjct: 489 QYKGIPPN 496
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+++M A KP+ TYN L+ + R+ + + K+M G SPN TY L+ +
Sbjct: 240 FQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFN 299
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
A+ ++ V MK + + S + + ++AFE+ + E
Sbjct: 300 AKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVL-QRL 358
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+++ S + EA A+ + + G +P+ + C K ++V L+R
Sbjct: 359 ACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRF 418
Query: 311 PELGI 315
E G+
Sbjct: 419 VEQGM 423
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LIK YG AG ++ +V E MK P ++TYN +++T GRA + +
Sbjct: 304 DIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYF 363
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M G+ PN TY SL+ AY +A S+ R+++ + L T +N ++
Sbjct: 364 KTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAYGQA 423
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
G D+ E+F +M+ E C PD+ TF++MI +G A+A+ ML A
Sbjct: 424 GDVDKMAELFLEMRERE-CMPDNVTFATMIQAYRGQGMTEAAQALEKMMLAA 474
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%)
Query: 176 PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI 235
P TY LL G+ R E+ ++ M+ +G++ ++ +Y L++ + G +AF
Sbjct: 126 PRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAFST 185
Query: 236 FEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
++MKS +C+PD +T+S +I IC+ + + +EM G E + ++I YG
Sbjct: 186 VDEMKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGYG 245
Query: 296 KAQRTDDVVRALNRLPELGITPDDRF 321
KA+ ++ +L + E+G + D F
Sbjct: 246 KAKMFREMENSLTNMIEIGNSVPDLF 271
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 2/210 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVK-PNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F+T+I YG A F N M IG P++ T+N+++ G + R +++ Y E
Sbjct: 237 FNTIINGYGKAKMFREMENSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEF 296
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+SP+ T+ L+++YG+A E SV MK++ +V YN ++ G
Sbjct: 297 QLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDI 356
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ E F+ MK +P++ T+ S+++ S G + + ++ ++ + +
Sbjct: 357 ENMDEYFKTMKHL-GMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNC 415
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+I YG+A D + + E PD+
Sbjct: 416 IINAYGQAGDVDKMAELFLEMRERECMPDN 445
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 2/226 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + FD + EM +GV+ + +T+N +++ G+AK +++
Sbjct: 198 DVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGYGKAKMFREMENSL 257
Query: 167 KEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + G S P+ T+ S++ AYG + E Y E + G+ + +N L+
Sbjct: 258 TNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIKSYGK 317
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++ + E MK P T++ +I G + + F M G +PN
Sbjct: 318 AGMYEKINSVIEFMKK-RFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAI 376
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
SL+ Y KA V L ++ + D F C++N Q
Sbjct: 377 TYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAYGQ 422
>gi|410110147|gb|AFV61153.1| pentatricopeptide repeat-containing protein 123, partial [Phyla
nodiflora]
Length = 419
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 117/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 162 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 221
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 222 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 281
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + +++G
Sbjct: 282 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDSGE 336
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 337 VKDITVFERMIHLLSKYKKYMNVVEVFDKMRGLGYFPDSNVIAVVLN 383
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++STL+ +Y F L+V+ EM+ ++ T N ++D G+ + ++ M
Sbjct: 101 SYSTLLTMYVENXKFLEALSVFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGM 160
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 161 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEH 220
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E + + +
Sbjct: 221 EKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQT 279
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+I Y +A R L+ L P D
Sbjct: 280 MIVAYERAGLVAHAKRLLHELKRPDNIPRD 309
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 36/242 (14%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
S LI+L ++ ++++ +K G P++ YN +++ G+AK + +++ EM
Sbjct: 33 SNLIELSRKLCDYSKAISIFSRLKXSGXXPDLXAYNAMINVFGKAKLFREARSLIXEMKT 92
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK------------------------ 207
G+ P +Y++LL Y + LSV+ EM+E
Sbjct: 93 AGVMPXTTSYSTLLTMYVENXKFLEALSVFSEMREXKCLXDLXTCNIMIDVYGQLGMAKE 152
Query: 208 -----------GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G++ +V YNTLL + D EA +F M+ +N + + T++SMI
Sbjct: 153 ADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMI 211
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
I + +A + EM G EPN +++I +GK + D +L G+
Sbjct: 212 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 271
Query: 317 PD 318
D
Sbjct: 272 ID 273
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 115 IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGL 174
I +G G FD L+ ++M+ V +++ +NL++ + + +I+ + +G
Sbjct: 1 ITHFGKEGLFDXALSWLQKMEXDXVPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXSGX 60
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
P+ Y +++ +G+A+ + S+ EMK G+ T Y+TLL M + EA
Sbjct: 61 XPDLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALS 120
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+F +M+ + C D T + MI + G EA+ +F M + G EPN+ +L++ Y
Sbjct: 121 VFSEMREXK-CLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY 179
Query: 295 GKAQ 298
G A+
Sbjct: 180 GDAE 183
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 57/129 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 291 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDSGEVKDITVFERMIHLL 350
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ N A +L AYG+ + +Y EM+E G S
Sbjct: 351 SKYKKYMNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLHEFDKASDIYMEMQEVGCVFSD 410
Query: 214 TLYNTLLAM 222
++ +L++
Sbjct: 411 EVHFQMLSL 419
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 5/228 (2%)
Query: 94 SYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
++ A+ K + P F+TLI G F + ++++M A G +P++ TY +++
Sbjct: 152 AFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIIN 211
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + + K+M + G PN TY++++ ++ + R + L ++ MK KG+
Sbjct: 212 GLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISP 271
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEA 270
+ YN+L+ + EA + +M+S N PD TF+ ++ TIC GKVSEA+
Sbjct: 272 DIFTYNSLIQGLCNFSQWKEASALLNEMRSL-NIMPDIVTFNVLVDTICK-EGKVSEAQG 329
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ M E G EP++ +SL+ Y + + + + G PD
Sbjct: 330 VLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 1/215 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++T+I G + ++M+ G +PN++TY+ ++D+ + +R +
Sbjct: 200 RPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALD 259
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I+ M G+SP+ TY SL++ ++ ++ EM+ + + +N L+
Sbjct: 260 IFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTIC 319
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA + + M + +PD T+SS++ S R +V EA +F+ M+ G +P++
Sbjct: 320 KEGKVSEAQGVLKTM-TEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDV 378
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
F LI Y K +R D+ + N + G+TP++
Sbjct: 379 FSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNN 413
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTIYKEMTDNGLSPNWNTY 181
N D L + M P +I + LL + + + + V ++ K+M GLSPN T
Sbjct: 77 NIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTL 136
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ L+ + + + SV ++ + G+Q ++ + TL+ VG +A E+F+DM
Sbjct: 137 SILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDM-V 195
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ C+PD +T++++I G+ + A + +M EAG +PN+ +++I + K +R +
Sbjct: 196 ARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVN 255
Query: 302 DVVRALNRLPELGITPD 318
+ + + + GI+PD
Sbjct: 256 EALDIFSYMKVKGISPD 272
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S+L+ Y +++ M G KP++ +YN L++ + KR + K ++
Sbjct: 342 DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLF 401
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM GL+PN +Y +L+ + + ++++ M G ++ Y+ LL
Sbjct: 402 NEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQ 461
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY +AF +F M+S+ + +P+ ++ +I G + +A +F+E+ G +PN +
Sbjct: 462 GYFGKAFRLFRAMQSTYS-KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQI 520
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
T++I K D+ + A + E G PD+
Sbjct: 521 YTTIINGLCKEGLLDEALEAFRNMEEDGCPPDE 553
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN + S LI + D +V ++ +G++P ++T+ L++ + + + Q
Sbjct: 129 LSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAM 188
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYREMKEKGMQLSVTLYNTLLA 221
++ +M G P+ TY +++ G + GE + + ++M+E G Q +V Y+T++
Sbjct: 189 ELFDDMVARGCRPDVYTYTTIIN--GLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIID 246
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+EA +IF MK + PD +T++S+I + EA A+ NEM
Sbjct: 247 SHRKDRRVNEALDIFSYMK-VKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIM 305
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ L+ K + + L + E+G+ PD
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPD 342
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 7/173 (4%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM+++ + P+++T+N L+DT+ + + + + + K MT+ G+ P+ TY+SL+ Y
Sbjct: 298 EMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRS 357
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
+ ++ M KG + V YN L+ V DEA ++F +M + P++ ++
Sbjct: 358 EVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEM-IHQGLTPNNVSY 416
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ--C----YGKAQR 299
+++I G + EA +F M G PNLF + L+ C +GKA R
Sbjct: 417 NTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFR 469
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 108 PNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ I L G G F ++ M++ KPN++ YN L+D M ++ + +
Sbjct: 446 PNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKL 505
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ E+ GL PN Y +++ + ++ L +R M+E G YN ++
Sbjct: 506 FSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVII 560
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 23/295 (7%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
++LIK +G G + L V+ +MK G++P + TYN L++ + A + +++ M
Sbjct: 191 NSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
+ P+ TY ++++ Y +A + L R M+ KG++ Y T++ C Y D
Sbjct: 251 GRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQAC----YADS 306
Query: 232 AFE----IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
F ++++M + Q FS +I GK++E A+F M+ G +PN+ +
Sbjct: 307 DFSSCVALYQEM-DEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIY 365
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE-- 345
T LI Y K +D +R L+R+ + G PD ++N + + G++ E ++
Sbjct: 366 TVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKN-----GRVEEAMDYF 420
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKK----EATELFNSISKD--VKKAYC-NCLID 393
++ G + + I+G K EA LF +S+ + +YC N LID
Sbjct: 421 QTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++ P+AFS +I G + V+E M G KPN+ Y L+D +
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIR 383
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ M D G +P+ TY+ ++ + E+ + ++ + G+ ++ Y++L+
Sbjct: 384 LLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLG 443
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM-LEAGFEPN 283
G DEA +FE+M S + C DS+ ++++I + GKV EA A+F M E G +
Sbjct: 444 KAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQT 502
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++ T LI K R ++ ++ + + + GITP
Sbjct: 503 VYTYTILISGMFKEHRNEEALKLWDMMIDKGITP 536
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI Y G+ + + + M G P+++TY+ +++ + + R +
Sbjct: 360 PNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDY 419
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ NGL+ N Y+SL+ G+A ++ ++ EM EKG YN L+
Sbjct: 420 FQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA +F+ M+ E C +T++ +I+ + EA +++ M++ G P
Sbjct: 480 HGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAA 539
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L +L + + + L+ L +G+ D
Sbjct: 540 CLRALSTGLCLSGKVARACKILDELAPMGVILD 572
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E + D +S ++ G + ++ ++ + G+ N + Y++L+D +G+A
Sbjct: 387 RMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAG 446
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLY 216
R + + +++EM++ G + + Y +L+ A+ + ++ L++++ M +E+G +V Y
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTY 506
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
L++ +EA +++ DM + P + ++ T GKV+ A + +E+
Sbjct: 507 TILISGMFKEHRNEEALKLW-DMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELA 565
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
G + +I KA R + + + + E G R ++N + + K +
Sbjct: 566 PMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKAD 624
Query: 337 LG 338
L
Sbjct: 625 LA 626
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 3/215 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN +++LI + D L + EEM A G P++ITYN L+D + + R +
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 461
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ +M +P+ TY+ L+ + + + +++ +M ++ + V ++TL+
Sbjct: 462 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 521
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G D+A + E+M +S+ C PD +T++S++ G++ EA + M + G +PN
Sbjct: 522 CNAGLVDDAERLLEEMVASD-CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN 580
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ T+LI + +A + R L + G+ P+
Sbjct: 581 VVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPN 615
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+STLI AG D ++E+M+ +P+++T+ L+D + + R + + +
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
+ M D +PN TY+SL+ + D V++ M +G++ +V YN+L+ C
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A + E+M ++ C PD T++++I G+ EA +F +M P++
Sbjct: 420 NG-VDSALLLMEEMTAT-GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 477
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI + K +R D + + + + PD
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 510
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 7/216 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FSTL++ Y AG D + EEM A P++ TY +L+D + R + + +
Sbjct: 510 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 569
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M G PN TY +L+ A+ RA + EM G+Q +V Y +L+
Sbjct: 570 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGT 629
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA +I E ++ ENC+ D + + M+ G++S A + + ++G P +
Sbjct: 630 GDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 689
Query: 287 LTSLIQ--CYGKAQRTDDVVRALNRLPELGITPDDR 320
+LI+ C GK ++ +A+ L E+ ++ R
Sbjct: 690 YVALIRGLCQGK-----ELGKAMEVLEEMTLSRKSR 720
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 96/188 (51%), Gaps = 1/188 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ +MK G PN TYN L++ + + + + KEM ++GL+PN TY++++ + R
Sbjct: 149 FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCR 208
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ ++R+M E G ++ YNTLL+ G DEA+E+ ++M+ QPD +
Sbjct: 209 QTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR-ERGLQPDKF 267
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
++ +++ GK+ A +F + P++ ++LI KA R D+ + ++
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327
Query: 311 PELGITPD 318
E PD
Sbjct: 328 RENSCEPD 335
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 152/352 (43%), Gaps = 13/352 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +ST+I + D ++ +M G PN++TYN LL + R + +
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM + GL P+ +Y +L+ + + L V+ + V Y+TL+A
Sbjct: 254 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 313
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNL 284
G DEA ++FE M+ + +C+PD TF++++ C+G ++ EA+ + M + PN+
Sbjct: 314 AGRLDEACKLFEKMREN-SCEPDVVTFTALMD-GLCKGDRLQEAQQVLETMEDRNCTPNV 371
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+SLI K + D R+ GI P+ L++ T + L +
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL---L 428
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENA 404
+ + G + ++ I+G K N + D+K +CN D+ L+
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN--PDVITYSCLIGGF 486
Query: 405 CKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALE 456
CKL + + ++ D+ ++ + +L G L ++D + LE
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL---VDDAERLLE 535
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 153/372 (41%), Gaps = 42/372 (11%)
Query: 106 IDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKP---------------------- 141
I PN F+ + + G +G+ D + EEM+ G P
Sbjct: 55 ITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKAL 114
Query: 142 ----------NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
N+IT+ ++D + +A R + T + +M G PN TY L+ + +
Sbjct: 115 DYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKV 174
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ +EMKE G+ +V Y+T++ D A+++F M + C P+ T
Sbjct: 175 HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVT 233
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++++ G + EA + +EM E G +P+ F +L+ K + D ++
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293
Query: 312 ELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKK 370
PD L+ + + + +E KL E + +++ + V L + +GD +
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 353
Query: 371 EATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSL 430
EA ++ ++ NC ++ +L++ CK ++ EV+ + R +
Sbjct: 354 EAQQVLETMEDR------NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 407
Query: 431 HLKSLSLGAALT 442
SL G +T
Sbjct: 408 TYNSLIHGFCMT 419
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 31/215 (14%)
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G N+ TYN L + + RA+R + I K G++PN TYA +++ ++
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN---------- 244
+ + EM+E G +YN ++ T +A + F M+ +N
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135
Query: 245 -CQ--------------------PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
C+ P+ WT++ +I KV A + EM E+G PN
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +++I + + + D + ++ E G P+
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPN 230
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 36/206 (17%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+ + G V + M G +PN++TY L+D RA +P +
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLL 604
Query: 167 KEMTDNGLSPNWNTYASLLRAY----------------------------------GRAR 192
+EM NG+ PN TY SL+ + G R
Sbjct: 605 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCR 664
Query: 193 YGE--DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
G L + +K+ G +Y L+ +A E+ E+M S +P++
Sbjct: 665 TGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAE 724
Query: 251 TFSSMITICSCRGKVSEAEAMFNEML 276
+ ++I + G+ EA A+ +E+L
Sbjct: 725 AYEAVIQELAREGRHEEANALADELL 750
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 118/222 (53%), Gaps = 6/222 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ +I + G D +++ EM GV P+++TYN ++D + +A+ + + ++
Sbjct: 192 DVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVF 248
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G+ PN TY +++ +A+ + V+++M +KG++ S YNT++
Sbjct: 249 QQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKA 308
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D A +F+ M +PD T++++I +C + + +AE +F +M++ G +P+
Sbjct: 309 QAVDRAEGVFQQM-IDRGVKPDHVTYNTIIDGLCKAQA-IDKAEGVFQQMIDKGVKPDNL 366
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
T +I KAQ D ++ + G+ P++ CL++
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIH 408
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 119/229 (51%), Gaps = 3/229 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I A D +V+++M GVKPN +TYN ++D + +A+ + ++
Sbjct: 224 DVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVF 283
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D G+ P+ TY +++ +A+ + V+++M ++G++ YNT++
Sbjct: 284 QKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKA 343
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D+A +F+ M + +PD+ T++ +I +C + V AE +F +M++ G +PN
Sbjct: 344 QAIDKAEGVFQQM-IDKGVKPDNLTYTIIIDGLCKAQ-SVDRAEGVFQQMIDKGVKPNNG 401
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
LI Y + ++VV+ + + + PD G LL+ + + K
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 3/214 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN F+T+I Y D ++++ +MK G+ PN++TY L+D + + R
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +M + G++PN + SL+ E ++ EM +G++ + +NT+L
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + + M +PD +++++I ++ EA + + M+ AG +PN
Sbjct: 621 CKEGRVMEARRLIDSM-VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ +L+ Y KA R D+ + G+TP
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTP 713
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 6/245 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I A D V+++M GVKP+ +TY ++D + +A+ + + ++
Sbjct: 329 DHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVF 388
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D G+ PN TY L+ Y E+ + +EM ++ V Y LL
Sbjct: 389 QQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKN 448
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA +F+ M + +P + M+ +G +SE + N M+ G PN +
Sbjct: 449 GKCNEARSLFDSM-IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRI 507
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
++I Y K D+V+ ++ + G++P+ G L++ + + LG++ + V +
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK-----LGRVDDAVLQ 562
Query: 347 SNSKL 351
N +
Sbjct: 563 FNQMI 567
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEM 134
Y+ N K A L +D+ R I P+ + ++ YG G ++ M
Sbjct: 444 YLCKNGKCNEARSL----FDSMIRKG---IKPSVTIYGIMLHGYGKKGALSEMHDLLNLM 496
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
A G+ PN +N ++ + +V I+ +M GLSPN TY +L+ A +
Sbjct: 497 VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRV 556
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+D + + +M +G+ + ++N+L+ V ++ E+F +M ++ +PD F++
Sbjct: 557 DDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM-LNQGIRPDIVFFNT 615
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
++ G+V EA + + M+ G +P++ +LI + A R D+ V+ L+ + G
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675
Query: 315 ITPD 318
+ P+
Sbjct: 676 LKPN 679
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N+ R D F+T++ G + + M +G+KP++I+YN L+D A R
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + M GL PN +Y +LL Y +A ++ ++REM KG+ V YNT+L
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS--SMITICSCRGK-VSEAEAMFNEMLE 277
G EA E++ +M S W+ S+I C+ EA +F +
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKL----WSICTYSIILDGFCKNNCFDEAFKIFQSLCS 778
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEE 336
+ ++ +I K R +D + +P G+ P + N++ + EE
Sbjct: 779 MDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE 838
Query: 337 LGKLVECVEKSNSK-----LGYVVKLLLEEQDI 364
L L +EKS + L +++ LL+ +I
Sbjct: 839 LDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEI 871
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 108/244 (44%), Gaps = 12/244 (4%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
K +SKL ++ R+ ++ P+ +S +I + G + + + G +
Sbjct: 57 KCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWR 116
Query: 141 PNMITYNNLLDTMGRAKRPWQ-VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+ I N LL + KR + + + ++M + G +Y +LL+ R E+
Sbjct: 117 VDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARE 176
Query: 200 VYREM---KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ M ++ V YN ++ + G D+A+ +F +M S PD T++++I
Sbjct: 177 LLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVS----PDVVTYNTII 232
Query: 257 T-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+C + +V AE +F +M+E G +PN ++I KAQ D ++ + G+
Sbjct: 233 DGLCKAQ-EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGV 291
Query: 316 TPDD 319
P +
Sbjct: 292 KPSN 295
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 95/229 (41%), Gaps = 36/229 (15%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++TL+ Y AG D ++ EM GV P + TYN +L+ + R+ R + +
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAR 735
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+Y M + + TY+ +L + + ++ +++ + +QL + +N ++
Sbjct: 736 ELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGL 795
Query: 224 ADVGYTDEAFEIFEDMKS-------------SENC---------------------QPDS 249
G ++A ++F + + +EN P+S
Sbjct: 796 FKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNS 855
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+++I RG++ A A +++ E F + LI + + +
Sbjct: 856 HMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREE 904
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 88 SKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K KE KS+ T RN + D + ++T+I + G L + EMK +KPN+ITY
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+ + + K + EM G SP+ T+ +L+A ++R + L ++ M
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ +T+YNTLL + G T +A + E+M S PD+ TF+++I +
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS-GIAPDTITFNALILGHCKSSHLD 746
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
A A + +ML PN+ +L+ R + L + + G+ P++
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+DPN ++ I Y + ++YE M GV +++T + L+ + R R +
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM G +PN TY +L+ + +A G++ LS+ EM +G+ + + Y L+
Sbjct: 295 ALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G TDE + S+N P+ T++ +I V EAE + EM E PN
Sbjct: 355 GKQGKTDEVKDTLR-FALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ +S+I + K D + E GI P+ G L++
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLID 457
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI + + + D Y +M + PN+ T+N LL + R + T+
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +GL PN TY L +G+ + + +Y EM KG V+ YN L++
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E+F+DM+ P S T+ +++ S +E + +M E GF P+
Sbjct: 848 GMMTQAKELFKDMQ-KRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
L+ + + + K T R L L
Sbjct: 907 LSFICRAFSKPGMTWQAQRLLKNL 930
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 3/183 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G+ L+V + M A G+ +++ YN L+ RA + + + M + G+ PN TY
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCADVGYTDEAFEIFEDMK 240
+ Y R + E+ +Y M G+ L V + L+A +C D G EA+ +F +M
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD-GRFSEAYALFREMD 301
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
P+ T+ ++I + G+ E ++ EM+ G +L T+L+ GK +T
Sbjct: 302 KV-GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360
Query: 301 DDV 303
D+V
Sbjct: 361 DEV 363
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 10/305 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y+ RN +D S L+ G F ++ EM +G PN +TY L+D++
Sbjct: 262 YEGMVRNGVL-LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+A R ++ ++ EM G+ + TY +L+ G+ ++ R + +
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
Y L+ DEA ++ +M+ ++ P+ TFSS+I RG + +A
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEE-KSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M E G PN+ +LI + K Q D + + + G+ + L+N + Q K
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499
Query: 335 -EELGKLVECVEKSNSKLGYV-----VKLLLEEQDIEGDFKKEATELFNSISKD--VKKA 386
EE L + S L +V + L + D+ FK + ++ D V
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559
Query: 387 YCNCL 391
+ NCL
Sbjct: 560 FINCL 564
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 124/277 (44%), Gaps = 38/277 (13%)
Query: 90 LKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L +K+ + + ++ I+PN + TLI + D L VY +M GVK N +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA-------RYGEDTL-- 198
+L++ + + + + ++K+ + +GLS + Y +L+ +A ++G++ +
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 199 --------------------------SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
S EM+ G++ + YNT++ G T +A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
++ +MK S + +P+ T+++++ G V +A+ + NEM+ AGF P+ ++Q
Sbjct: 609 LKLLHEMKMS-SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+++R D ++ + G+ D LL V+
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A +D ++TLI AG+ +E+ + P+ + YN ++ + +
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGK 569
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ K+ EM + GL P+ +TY +++ ++ R L + EMK ++ ++ YNT
Sbjct: 570 FKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNT 629
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+A G ++A + +M S+ P S T ++ CS ++ + M+ A
Sbjct: 630 LVAGLFGTGAVEKAKYLLNEMVSA-GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688
Query: 279 GFEPNLFVLTSLIQ--CYGKAQRTDDVVRALNRLPELGITPD 318
G ++ V +L+Q CY R VV L + GI PD
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVV--LEEMLGSGIAPD 728
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E+ I PN FS++I + G D MK G+ PN++TY L+D + +
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+Y +M G+ N SL+ + E+ ++++++ G+ L Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G AF+ +++ N PD+ ++ I GK EA++ EM G
Sbjct: 526 IDGLFKAGDMPTAFKFGQELM-DRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG 584
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P+ ++I + + T ++ L+ + I P+
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPN 623
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 117/226 (51%), Gaps = 1/226 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D + Y EM + PN++TY++++ + +A+ + +
Sbjct: 203 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVL 262
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ P+ TY S+L Y + ++ + ++M+ G++ +V Y +L+
Sbjct: 263 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKN 322
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +IF+ M + +PD T+ +++ + +G + E A+ + M+ G +P+ V
Sbjct: 323 GRCTEARKIFDSM-TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 381
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI Y K ++ D + +++ + G+ P+ G +++V+ ++
Sbjct: 382 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 427
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+Y T RI PN +S++I A D + V M GV P+ +TYN++
Sbjct: 221 DKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 280
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L + +P + K+M +G+ PN TY SL+ + + ++ M ++G+
Sbjct: 281 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGL 340
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ + Y TLL A G E + D+ QPD F+ +I + + KV +A
Sbjct: 341 EPDIATYRTLLQGYATKGALVEMHALL-DLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 399
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+F++M + G PN+ ++I K+ DD +
Sbjct: 400 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 434
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L++ + + G P++++Y +++ + + + Y EM D +SPN TY+S++ A
Sbjct: 189 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAA 248
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+A+ + + V M + G+ YN++L G EA + M+ S+ +P
Sbjct: 249 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR-SDGVEP 307
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+ S++ G+ +EA +F+ M + G EP++ +L+Q Y ++ L
Sbjct: 308 NVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ + GI PD L+ + K + LV
Sbjct: 368 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 401
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN + +L+ G +++ M G++P++ TY LL ++
Sbjct: 305 VEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 364
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M NG+ P+ + + L+ AY + + + V+ +M++ G+ +V Y T++ +
Sbjct: 365 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 424
Query: 224 ADVGYTDEAFEIFE 237
G D+A FE
Sbjct: 425 CKSGSVDDAMLYFE 438
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 16/261 (6%)
Query: 96 DTRARNEKWRI---------DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
D + WR+ +PN ++ LI +G + ++ M GV PN +
Sbjct: 502 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 561
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TYN L++ + +R + M NGL N TY +++ Y + + V M
Sbjct: 562 TYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM 621
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++G ++ YNT++ D G T A I + M+ C+PD W+++ +I K
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG-GCKPDEWSYTELICGFCKISK 680
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ A +FNEM++ G PN T+LI Y K ++ D L + G P+ +
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740
Query: 325 LLNVMTQ----TPKEELGKLV 341
L++ +T+ + EEL K++
Sbjct: 741 LIHGLTKQNNFSGAEELCKVM 761
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+IK Y +GN L + + M+ G KP+ +Y L+ + + ++ EM
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 692
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D+GL PN TY +L+ Y + + S+ MK G + +V YN L+
Sbjct: 693 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 752
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ + M E P+ T+++MI G S A MFN+M+E G PNL +SL
Sbjct: 753 GAEELCKVM-IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 811
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
I+ G+ + ++ L G+ PD+
Sbjct: 812 IRALGQEGKVEEAENLFAELERHGLIPDE 840
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+ A+S L+ G ++ Y M + GV+PN++ YN +++ + + +T
Sbjct: 347 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 406
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I K++ ++ +SP+ TY S++ + R + L V+ +M ++G + + Y+TL+
Sbjct: 407 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 466
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D G +EAF++ +M P + T + I G +A +F +M G EPN+
Sbjct: 467 DSGRVNEAFDLIREM-ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNV 525
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ T+LI + + +R+ G+ P+ L+N++ + + + +V +
Sbjct: 526 YTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNL 585
Query: 345 EKSNSKLGYVVKL--LLEEQDIEGDFKKEATELFNSISKD----------VKKAYCN 389
N +V +++ I GD KK + N + + + K YC+
Sbjct: 586 MGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCD 642
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R+ + D +++ LI + + ++ EM G+ PN +TY L+D + ++
Sbjct: 657 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 716
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ + M +G PN TY L+ + + + M E+G+ +V Y +
Sbjct: 717 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 776
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G T A E+F M + C P+ T+SS+I GKV EAE +F E+ G
Sbjct: 777 IDGLCKNGSTSLALEMFNKM-IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 835
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P+ +I+ Y + + + L R+ + G P
Sbjct: 836 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 873
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + ++ LI NF G + + M G+ PN++TY ++D + +
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M + G PN TY+SL+RA G+ E+ +++ E++ G+ Y ++
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
G + AF M + CQP WT+ +I
Sbjct: 852 MSGKVEHAFNFLGRMIKA-GCQPTLWTYGVLI 882
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 8/218 (3%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVG 227
++ +GL Y++LL R + Y M +G+Q ++ +YN ++ A+C D G
Sbjct: 341 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKD-G 399
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFV 286
+A I + + SE PD++T++SMI + CR + A +FN+M + G EPN
Sbjct: 400 NVADAETIMKKVFESEM-SPDTFTYTSMI-LGHCRKHDLDSALQVFNQMAKEGCEPNTVT 457
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC-GCLLNVMTQTPKEELGKL-VECV 344
++LI + R ++ + + GI P C G ++ + E+ +L V+
Sbjct: 458 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 517
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
K Y L+ + G K A LF+ +S+D
Sbjct: 518 NKGCEPNVYTYTALISGLCVSG-LLKVAIGLFHRMSRD 554
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 43/286 (15%)
Query: 94 SYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+ A+ K + P F+TLI G F + ++++M A G +P++ TYN +++
Sbjct: 147 GFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIIN 206
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + + K+M + G PN TY++L+ + R R + L ++ MK KG+
Sbjct: 207 GLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISP 266
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ Y +L+ EA + +M +S N PD TF+ ++ GKVSEA +
Sbjct: 267 DIFTYTSLIQGLCKFSRWKEASALLNEM-TSLNIMPDIVTFNVLVDTFCKEGKVSEALGV 325
Query: 272 FNEMLEAGFEPNLFVLTS-----------------------------------LIQCYGK 296
M E G EPN+ +S LI Y K
Sbjct: 326 LKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCK 385
Query: 297 AQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
A+R D+ ++ N + G+TP++ L++ Q LGKL E
Sbjct: 386 AKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ-----LGKLRE 426
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+D +++ ++M+ +G+ PN+ T + ++ + +R ++ ++ GL P T+ +
Sbjct: 109 YDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTT 168
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ + + ++ +M KG Q V YNT++ +G T A + + M+ +
Sbjct: 169 LINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA- 227
Query: 244 NCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
CQP+ T+S++I CR + V+EA +F+ M G P++F TSLIQ K R +
Sbjct: 228 GCQPNMVTYSTLID-SLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKE 286
Query: 303 VVRALNRLPELGITPD--------DRFC 322
LN + L I PD D FC
Sbjct: 287 ASALLNEMTSLNIMPDIVTFNVLVDTFC 314
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN +S+L+ Y + ++ M G KPN+ +YN L++ +AKR +
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ EM GL+PN +Y +L+ + G+ R +D ++R M G + Y+ LL
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD---LFRNMCTNGNLPDLFTYSILL 450
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
GY +AF +F M+S+ +P+ ++ ++ G +A +F+E+ G
Sbjct: 451 DGFCKQGYLGKAFRLFRAMQSTY-LKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 509
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+P++ + T++I K D+ + A + G PD+
Sbjct: 510 QPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDE 548
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN + S + + D +V ++ +G++P ++T+ L++ + + Q
Sbjct: 124 LSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAV 183
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYREMKEKGMQLSVTLYNTLL- 220
++ +M G P+ TY +++ G + GE + + ++M+E G Q ++ Y+TL+
Sbjct: 184 ELFDDMVAKGCQPDVYTYNTIIN--GLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLID 241
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
++C D +EA +IF MK ++ PD +T++S+I + EA A+ NEM
Sbjct: 242 SLCRD-RLVNEALDIFSYMK-AKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNI 299
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ L+ + K + + + L + E+G+ P+
Sbjct: 300 MPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPN 337
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM ++ + P+++T+N L+DT + + + + K MT+ G+ PN TY+SL+ Y
Sbjct: 293 EMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWT 352
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
+ ++ M KG + ++ YN L+ DEA ++F +M + P++ ++
Sbjct: 353 DVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM-IHQGLTPNNVSY 411
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+++I GK+ EA+ +F M G P+LF + L+ + K R +
Sbjct: 412 NTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQS 471
Query: 313 LGITPDDRFCGCLLNVMTQT 332
+ P+ L++ M ++
Sbjct: 472 TYLKPNLVMYTILVHAMCKS 491
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I G D +++EM G+ PN ITYN LL + +P + I+
Sbjct: 205 DVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIF 264
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M +G+ P+ TY +L+ + + V+ M +KG + ++Y TLL A
Sbjct: 265 RKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATE 324
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY + ++ D+ QPD + F+ +I + G V EA F++M + G PN+
Sbjct: 325 GYLVQMHQLL-DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVT 383
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ + + DD + +RL G+TP+
Sbjct: 384 YGTVMDALCRVGKVDDAMSQFDRLISEGLTPN 415
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 116/235 (49%), Gaps = 7/235 (2%)
Query: 108 PNAFSTLIKLYGTA--GNFDGCLNVYEEMKAI----GVKPNMITYNNLLDTMGRAKRPWQ 161
PNAFS I L G L++ M A G P++++Y +++ + R + +
Sbjct: 165 PNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDK 224
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ EM D G+SPN TY LL Y + ++ + ++R+M G++ V YNTL+
Sbjct: 225 AYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMV 284
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G + EA ++F+ M + +PDS + +++ + G + + + + M+ G +
Sbjct: 285 YLCKNGRSMEARKVFDSMVKKGH-KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQ 343
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
P+ ++ LI Y K D+ + A +++ + G+ P+ G +++ + + K +
Sbjct: 344 PDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVD 398
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 97 TRARNE---KWRIDPNA----FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
TRA+N R+D ++TLI Y G D + E M GVKPN +TYN +
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ + R +++++M G++P Y+++L + R +Y M + G+
Sbjct: 528 INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGI 587
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD----SWTFSSMITICSCRGKV 265
+L + YN +L TD+A +F ++ C D + TF+ MI G+
Sbjct: 588 KLPIGTYNIILQGLCQNNCTDDALRMFHNL-----CLIDFHLQNRTFNIMIDALLKGGRH 642
Query: 266 SEAEAMFNEMLEAGFEPNL----FVLTSLIQ 292
EA+ +F +L G PN+ ++ SLI+
Sbjct: 643 DEAKDLFASLLARGLVPNVVTYWLMMKSLIE 673
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 41/293 (13%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKA 136
Y+ N +S A K+ +D+ + + + D + + TL+ Y T G + + M
Sbjct: 285 YLCKNGRSMEARKV----FDSMVK-KGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVR 339
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
G +P+ +N L+ + + + +M GL PN TY +++ A R +D
Sbjct: 340 NGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDD 399
Query: 197 TLS---------------VYR--------------------EMKEKGMQLSVTLYNTLLA 221
+S V+R EM +G+ + +NTLL
Sbjct: 400 AMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLN 459
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G A IF D+ + Q D T++++I GKV EA + M+ G +
Sbjct: 460 HLCKEGMVTRAKNIF-DLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVK 518
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
PN ++I Y K R +D ++ G+ P +L+ + QT +
Sbjct: 519 PNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRR 571
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F TLI +D + EM G+ PN I +N LL+ + + + K
Sbjct: 412 LTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAK 471
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I+ M + + TY +L+ Y ++ + M G++ + YNT++
Sbjct: 472 NIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGY 531
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++A +F M +S+ P +S+++ +++ A+ ++ M++ G +
Sbjct: 532 CKNGRIEDACSLFRQM-ASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLP 590
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRL 310
+ ++Q + TDD +R + L
Sbjct: 591 IGTYNIILQGLCQNNCTDDALRMFHNL 617
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 40/246 (16%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+ +TYN L D R K + I ++M ++G++P TY +L+ + R+ +
Sbjct: 208 PDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDF 267
Query: 201 YREMKEKG-----MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ +MK++G + V Y T+L G D+A ++F++M S E C P T++++
Sbjct: 268 FLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEM-SREGCTPSIATYNAL 326
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I + +G V +A A+F++M+ G+ PN+ T LI+ A + D ++ L+++ G
Sbjct: 327 IQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGC 386
Query: 316 TPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATEL 375
P+ V+ N +GY L EE DIE +A L
Sbjct: 387 EPN-------------------------VQTYNVLIGY----LFEEGDIE-----KALHL 412
Query: 376 FNSISK 381
F ++SK
Sbjct: 413 FETMSK 418
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+E + D +++T++ G AG D V++EM G P++ TYN L+ +
Sbjct: 278 DENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVE 337
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ +M G PN TY L+R A + + + +MK +G + +V YN L+
Sbjct: 338 DAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLI 397
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE---AEAMFNEMLE 277
+ G ++A +FE M E C P+ T++ +I+ R + + A M EM++
Sbjct: 398 GYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVD 457
Query: 278 AGFEPNLFVLTSLI 291
G+ P F+ ++
Sbjct: 458 RGYLPRRFMFNRVL 471
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 39/301 (12%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
N F+ LI Y + N + L + +M G P+ +TYN +L + + + QV+ + +
Sbjct: 212 NTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQ 271
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M ++GL PN NTY L+ Y + ++ ++ V M KGM V YNT++ D G
Sbjct: 272 MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGK 331
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITIC----------------------------- 259
DEA + + M+S + PD T++++I C
Sbjct: 332 IDEAVRLRDKMESFK-LVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHN 390
Query: 260 ------SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
GK+ EA + +M+E+GF P+ F ++I Y KA + + + ++ +
Sbjct: 391 IMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK 450
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT 373
G+ D LL+ M +++L K+ K GY++ + I G FK E
Sbjct: 451 GLKLDTFTLNTLLHTMCL--EKQLDDAYTLTMKAR-KRGYILDEVTYGTLIMGYFKDEQA 507
Query: 374 E 374
+
Sbjct: 508 D 508
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 38/266 (14%)
Query: 98 RARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
R + E +++ P+ ++TLI D + EEMKA GVK N +T+N ++
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ + + +M ++G SP+ TY +++ Y +A + + EM KG++L
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458
Query: 216 YNTLL-AMCAD-----------------------------VGY-----TDEAFEIFEDMK 240
NTLL MC + +GY D A +++E+MK
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK 518
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+ T++++I GK +A NE+LE G P+ +I Y
Sbjct: 519 ET-GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAV 577
Query: 301 DDVVRALNRLPELGITPDDRFCGCLL 326
+ + N++ E + PD C LL
Sbjct: 578 EKAFQFHNKMVEHSLKPDIFTCNILL 603
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I Y AG + +EM G+K + T N LL TM K+ T+
Sbjct: 420 DCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLT 479
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G + TY +L+ Y + + L ++ EMKE G+ ++ YNT++
Sbjct: 480 MKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLS 539
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G TD+A + ++ + PD T + +I G V +A N+M+E +P++F
Sbjct: 540 GKTDQAVDKLNEL-LEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFT 598
Query: 287 LTSLIQ 292
L++
Sbjct: 599 CNILLR 604
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 114/267 (42%), Gaps = 15/267 (5%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+AR + +D + TLI Y D L ++EEMK G+ +ITYN ++ + +
Sbjct: 481 KARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSG 540
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ Q E+ + GL P+ +T ++ Y E + +M E ++ + N
Sbjct: 541 KTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCN 600
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
LL G ++ +F + S+ D+ T++ +I+ ++ +A + EM
Sbjct: 601 ILLRGLCREGMLEKGLTLF-NTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEG 659
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDV-------------VRALNRLPELGITPDDRFCGC 324
EP+ + +++ KA RT++ V+ + PELG T D +
Sbjct: 660 KNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELG-TSDMMYSEQ 718
Query: 325 LLNVMTQTPKEELGKLVECVEKSNSKL 351
+ ++ TQ ++ KL + E+ L
Sbjct: 719 ISSLCTQGKYKDAMKLFQQAEQKGVSL 745
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV---KTIYKEMTDNGLSPNWNTYASLLR 186
++ +MK + +PN++T N LL+ + R+ + + ++++ G+ PN NT+ L+
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
Y E+ L + +M E G YNT+L + ++ MK+S
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNS-GLF 278
Query: 247 PDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
P+ T++ ++ C+ K + EA + M G P+++ ++++ + D+ VR
Sbjct: 279 PNRNTYNILVH-GYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR 337
Query: 306 ALNRLPELGITPD 318
+++ + PD
Sbjct: 338 LRDKMESFKLVPD 350
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/253 (17%), Positives = 104/253 (41%), Gaps = 4/253 (1%)
Query: 86 RASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+A K+ E K D R + ++D +TL+ D + + + G +
Sbjct: 433 KAGKMAEAYKMMDEMGR-KGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDE 491
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TY L+ + ++ + +++EM + G+ TY +++R + + + E
Sbjct: 492 VTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNE 551
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+ EKG+ + N ++ G ++AF+ F + + +PD +T + ++ G
Sbjct: 552 LLEKGLVPDESTSNIIIHGYCWEGAVEKAFQ-FHNKMVEHSLKPDIFTCNILLRGLCREG 610
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
+ + +FN + G + +I + K +R +D + + + PD
Sbjct: 611 MLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYN 670
Query: 324 CLLNVMTQTPKEE 336
++ +T+ + E
Sbjct: 671 AIVTGLTKAGRTE 683
>gi|449445824|ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
gi|449487417|ref|XP_004157616.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
Length = 486
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 3/235 (1%)
Query: 86 RASKLKEK--SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RA K E ++D+ + R ++ LI + +G FD L Y M + VKP++
Sbjct: 160 RARKFDEAVFAFDSMRKLIDGRPSVVVYNILINGFVKSGRFDKALGFYSRMLSDRVKPDV 219
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
T+N L+ R + Q ++KEM + G SPN ++ +L++ + R R ED +++ E
Sbjct: 220 YTFNILISGYCRNSQFVQALELFKEMREKGCSPNVISFNTLIKGFFRERKFEDGIALAYE 279
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M E G + S L+ + G EA EI D S + P + + ++ + +G
Sbjct: 280 MIELGCKFSSVTCEILMDGLSREGKIFEACEILLDF-SRKQVLPKDYDYYGVVEMLCGKG 338
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A + +E+ G P+ T+LI K R +D + R+ E+G+ PD
Sbjct: 339 NAGKAMEVVDELWMEGNVPSFITSTTLIDGLRKEGRVNDAMNVTERMLEVGMIPD 393
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 38/214 (17%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +F+TLIK + F+ + + EM +G K + +T L+D + R + ++ I
Sbjct: 252 PNVISFNTLIKGFFRERKFEDGIALAYEMIELGCKFSSVTCEILMDGLSREGKIFEACEI 311
Query: 166 YKEMTDNGLSP-NWNTYASLLRAYGRARYGE----------------------------- 195
+ + + P +++ Y + G+ G+
Sbjct: 312 LLDFSRKQVLPKDYDYYGVVEMLCGKGNAGKAMEVVDELWMEGNVPSFITSTTLIDGLRK 371
Query: 196 -----DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
D ++V M E GM +N+LL +V T EA ++ + SS+ +PD+
Sbjct: 372 EGRVNDAMNVTERMLEVGMIPDSVTFNSLLQDLCNVRKTVEANKL-RLLASSKGFEPDNK 430
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
T+ ++++ + G E + + EML+ F P++
Sbjct: 431 TYYTLVSGYTMEGNKVEGQRLVEEMLDKEFIPDI 464
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+TLI G + +NV E M +G+ P+ +T+N+LL + ++ + + +
Sbjct: 363 TTLIDGLRKEGRVNDAMNVTERMLEVGMIPDSVTFNSLLQDLCNVRKTVEANKLRLLASS 422
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
G P+ TY +L+ Y + + EM +K + YN L+
Sbjct: 423 KGFEPDNKTYYTLVSGYTMEGNKVEGQRLVEEMLDKEFIPDIATYNRLM 471
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +AF +++++ +G +++ M G+ ++ YN + +G+ K+ + T++
Sbjct: 392 DRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLF 451
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +G++P+ TY ++ +YGR + ++ EM+ + V YNTL+
Sbjct: 452 DKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKN 511
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA +F++M+ + PD +T+S++I KV A ++F+EM+ G PN+
Sbjct: 512 GDLDEAHILFKEMQ-EKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVT 570
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C + +T + + + + G+TPD
Sbjct: 571 YNILLDCLERRGKTAEAHKHYETMKQQGLTPD 602
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 14/319 (4%)
Query: 109 NAFS---TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+AFS L L+ + + L + +M+ GV N+ T N L+ G + +
Sbjct: 117 DAFSYNRILALLFRSKADPGEALRLVAQMERDGVAGNISTVNLLVGMGGGGVEVARCLEL 176
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K+ GL N TY +++A+ R+R VY EM KG +L + YN LL A
Sbjct: 177 AKKW---GLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAK 233
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A+++FEDMK + C PD++T++ +I + G+ + + F+EM+ G NL
Sbjct: 234 AGMVDQAYQVFEDMKQ-KYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLI 292
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
++I+ GK + D V+ L+++ E P+ L+++ + +L +L E ++
Sbjct: 293 AYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILAT--EGQLHRLNEVLD 350
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELF----NSISKDVKKAYCNCLIDLCVNLNLL 401
+ L + L + + EA +F NS + A+ + L LC + L
Sbjct: 351 ICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTL 410
Query: 402 ENACKLLELGLTLEVYTDI 420
E A LL + + TDI
Sbjct: 411 E-AIDLLHMMPEKGIDTDI 428
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ + +S L+K +G+ NV+ M + + ++L+ + + + + +
Sbjct: 356 LNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDL 415
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + G+ + Y + A G+ + +++ +MK G+ + YN +++
Sbjct: 416 LHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGR 475
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG D+A +FE+M++S +C+PD T++++I G + EA +F EM E G++P++F
Sbjct: 476 VGLVDKASGLFEEMEAS-SCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVF 534
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
++LI+C+GK+ + D + + G P+ LL+ + + K
Sbjct: 535 TYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGK 583
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P+ F+ +I YG G D ++EEM+A KP++ITYN L++ +G+ +
Sbjct: 459 IAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAH 518
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++KEM + G P+ TY++L+ +G++ + S++ EM +G ++ YN LL
Sbjct: 519 ILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCL 578
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
G T EA + +E MK + PDS T+S
Sbjct: 579 ERRGKTAEAHKHYETMK-QQGLTPDSITYS 607
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 98/188 (52%), Gaps = 2/188 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++++MKA G+ P++ TYN ++ + GR + +++EM + P+ TY +L+ G
Sbjct: 450 LFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLG 509
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ +++EM+EKG V Y+TL+ D A +F++M +E C P+
Sbjct: 510 KNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEM-IAEGCIPNI 568
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ ++ RGK +EA + M + G P+ + L + ++QRT +R +R
Sbjct: 569 VTYNILLDCLERRGKTAEAHKHYETMKQQGLTPDSITYSILERLESRSQRTAR-IRKPSR 627
Query: 310 LPELGITP 317
+ ++P
Sbjct: 628 VTSWVVSP 635
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 35/251 (13%)
Query: 102 EKW--RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW R++ + +++ + + VYEEM G K ++ YN LLD + +A
Sbjct: 178 KKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMV 237
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q ++++M P+ TY L+R G+ LS + EM +G L++ YNT+
Sbjct: 238 DQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTV 297
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS----------------SMITICS--- 260
+ D+ + M S+ CQP+ +T+S ++ IC
Sbjct: 298 IEALGKNKMVDKVIFVLSKMIESD-CQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYL 356
Query: 261 ------------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
C+ G SEA +F M + + S+++ + +T + + L
Sbjct: 357 NKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLL 416
Query: 308 NRLPELGITPD 318
+ +PE GI D
Sbjct: 417 HMMPEKGIDTD 427
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 68 GKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
GK G +++I +++EK YD D +STLI+ +G + D
Sbjct: 509 GKNGDLDEAHILFK-------EMQEKGYDP---------DVFTYSTLIECFGKSNKVDMA 552
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
++++EM A G PN++TYN LLD + R + + Y+ M GL+P+ TY+ L R
Sbjct: 553 CSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETMKQQGLTPDSITYSILERL 612
Query: 188 YGRAR 192
R++
Sbjct: 613 ESRSQ 617
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI G G+ D +++EM+ G P++ TY+ L++ G++ + +++
Sbjct: 497 DVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLF 556
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
EM G PN TY LL R + Y MK++G+ Y+ L
Sbjct: 557 DEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYETMKQQGLTPDSITYSIL 609
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
DP F L+K Y G + ++ +G P++I+ N LL+ + + R Q +Y
Sbjct: 178 DPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVY 237
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM G+ PN T+ L + + + M+E+G + + YNTL++
Sbjct: 238 KEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRK 297
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+AF ++ M N PD ++++++ GKV EA +F+ M+ G P++
Sbjct: 298 GRLDDAFYLYRIM-YRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVS 356
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+LI Y K + + L+ + GI PD C L+
Sbjct: 357 FNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLI 396
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 177 NWN--TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
NW+ + L++AY R ++ + +R++ E G SV N LL + D+ ++
Sbjct: 176 NWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQ 235
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
++++M + P+S+TF+ + + G V + M E GFEP++ +LI CY
Sbjct: 236 VYKEM-ARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCY 294
Query: 295 GKAQRTDDVVRALNRLPELGITPD 318
+ R DD + + PD
Sbjct: 295 CRKGRLDDAFYLYRIMYRRNVLPD 318
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN+ F+ L ++ G+ D + E M+ G +P+++TYN L+ R R
Sbjct: 245 IHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAF 304
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+Y+ M + P+ +Y +L+ + + ++ M +G+ + +NTL+
Sbjct: 305 YLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLIC-- 362
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
GY E GK+ E+ ++ +EM+ +G P+
Sbjct: 363 ---GYCKE-------------------------------GKMRESRSLLHEMIGSGICPD 388
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
LI+ Y K R +V ALN + EL
Sbjct: 389 KVTCQVLIEGYRKEAR---IVSALNLVVEL 415
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/310 (18%), Positives = 119/310 (38%), Gaps = 41/310 (13%)
Query: 68 GKTGSSPKSY---IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNF 124
+ G P SY I + K + R E + D ++TLI Y G
Sbjct: 241 ARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRL 300
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D +Y M V P++++Y L++ + + + + ++ M GL+P+ ++ +L
Sbjct: 301 DDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTL 360
Query: 185 LRAY---GRARYGE--------------------------------DTLSVYREMKEKGM 209
+ Y G+ R L++ E++ G+
Sbjct: 361 ICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGV 420
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+S +Y+ L+ + G A + + + S P ++ +I +++A
Sbjct: 421 PISTDIYDYLMVSICEEGRPFAAKSLLQRI-SQRGYVPGVEIYNKLIESLCKSDSIADAL 479
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+ +EM +P+ +LI C + R+ + + + + G+ PD C L++V
Sbjct: 480 LVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVY 539
Query: 330 TQTPKEELGK 339
+ + ++GK
Sbjct: 540 CK--ERDIGK 547
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 36/191 (18%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI+ + + L V EM +KP+ ITY L+ + R R + +++ +EM
Sbjct: 462 YNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEML 521
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ + +L+ Y KE+ + + TL T
Sbjct: 522 QSGMLPDPDICRALMHVY---------------CKERDIGKAETLLQTF----------A 556
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ F+IF DS ++++++ + + + ML+ GF PN+ +
Sbjct: 557 KEFQIF-----------DSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQM 605
Query: 291 IQCYGKAQRTD 301
I KA +
Sbjct: 606 IHGLWKAMAVE 616
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 88 SKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K KE KS+ T RN + D + ++T+I + G L + EMK +KPN+ITY
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+ + + K + EM G SP+ T+ +L+A ++R + L ++ M
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ +T+YNTLL + G T +A + E+M S PD+ TF+++I +
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS-GIAPDTITFNALILGHCKSSHLD 746
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
A A + +ML PN+ +L+ R + L + + G+ P++
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+DPN ++ I Y + ++YE M GV +++T + L+ + R R +
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM G +PN TY +L+ + +A G++ LS+ EM +G+ + + Y L+
Sbjct: 295 ALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G TDE + S+N P+ T++ +I V EAE + EM E PN
Sbjct: 355 GKQGKTDEVKDTLR-FALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ +S+I + K D + E GI P+ G L++
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLID 457
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 3/199 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++TLI Y G+ L+V + M A G+ +++ YN L+ RA + + +
Sbjct: 167 LDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGV 226
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCA 224
M + G+ PN TY + Y R + E+ +Y M G+ L V + L+A +C
Sbjct: 227 LDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR 286
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D G EA+ +F +M P+ T+ ++I + G+ E ++ EM+ G +L
Sbjct: 287 D-GRFSEAYALFREMDKV-GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDL 344
Query: 285 FVLTSLIQCYGKAQRTDDV 303
T+L+ GK +TD+V
Sbjct: 345 VTYTALMDWLGKQGKTDEV 363
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 10/305 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y+ RN +D S L+ G F ++ EM +G PN +TY L+D++
Sbjct: 262 YEGMVRNGVL-LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+A R ++ ++ EM G+ + TY +L+ G+ ++ R + +
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
Y L+ DEA ++ +M+ ++ P+ TFSS+I RG + +A
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEE-KSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M E G PN+ +LI + K Q D + + + G+ + L+N + Q K
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499
Query: 335 -EELGKLVECVEKSNSKLGYV-----VKLLLEEQDIEGDFKKEATELFNSISKD--VKKA 386
EE L + S L +V + L + D+ FK + ++ D V
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559
Query: 387 YCNCL 391
+ NCL
Sbjct: 560 FINCL 564
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI + + + D Y +M + PN+ T+N LL + R + T+
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +GL PN TY L +G+ + + +Y EM KG V+ YN L++
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
G +A E+F+DM+ P S T+ +++
Sbjct: 848 GMMTQAKELFKDMQ-KRGVHPTSCTYDILVS 877
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 124/277 (44%), Gaps = 38/277 (13%)
Query: 90 LKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L +K+ + + ++ I+PN + TLI + D L VY +M GVK N +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA-------RYGEDTL-- 198
+L++ + + + + ++K+ + +GLS + Y +L+ +A ++G++ +
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 199 --------------------------SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
S EM+ G++ + YNT++ G T +A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
++ +MK S + +P+ T+++++ G V +A+ + NEM+ AGF P+ ++Q
Sbjct: 609 LKLLHEMKMS-SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+++R D ++ + G+ D LL V+
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A +D ++TLI AG+ +E+ + P+ + YN ++ + +
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGK 569
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ K+ EM + GL P+ +TY +++ ++ R L + EMK ++ ++ YNT
Sbjct: 570 FKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNT 629
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+A G ++A + +M S+ P S T ++ CS ++ + M+ A
Sbjct: 630 LVAGLFGTGAVEKAKYLLNEMVSA-GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688
Query: 279 GFEPNLFVLTSLIQ--CYGKAQRTDDVVRALNRLPELGITPD 318
G ++ V +L+Q CY R VV L + GI PD
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVV--LEEMLGSGIAPD 728
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EK ++PN + L +G N + +Y EM G P + TYN L+ +A
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRA-YGRAR 192
Q K ++K+M G+ P TY L+ Y AR
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAR 884
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y G +G + + +MK+ +KP+ ITYN L++ + +A+R + + EM
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
DNG++P T+ +L+ AYGR E V EM+E G++ +V Y +++ G
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA I +DM ++ P++ ++++I G +A + +M G P++ L
Sbjct: 494 EAVAILDDM-FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 552
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I+ + + +N L + PD
Sbjct: 553 IKGLCNQSQISEAEEIINSLSNHRLIPD 580
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 103/222 (46%), Gaps = 5/222 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI YG G + C V EM+ G+KPN+++Y ++++ + + + I +M
Sbjct: 444 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 503
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ PN Y +++ AY + + +MK G+ S+ YN L+ +
Sbjct: 504 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 563
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA EI + S+ PD+ +++++I+ C RG + +A + M + G + + L
Sbjct: 564 EAEEIINSL-SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 622
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
I G A R ++ ++ + + P + + N+M +
Sbjct: 623 ISGLGGAGRLIEMEYLYQKMMQNNVVPSN----AIHNIMVEA 660
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 41/269 (15%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I + G+ + ++ ++M G+KPN ITYN LL + RA R + + EM
Sbjct: 234 YNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 293
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVY----------------------------- 201
+ P+ TY+ L R + LS++
Sbjct: 294 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVS 353
Query: 202 ------REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ + G+ + +YNTL+ G + AF F MK S + +PD T++++
Sbjct: 354 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK-SRHIKPDHITYNAL 412
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I +++ A+ + EM + G P + +LI YG+ + + L+ + E G+
Sbjct: 413 INGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 472
Query: 316 TPDDRFCGCLLNVMTQTPKEELGKLVECV 344
P+ G ++N + GK+ E V
Sbjct: 473 KPNVVSYGSIVNAFCKN-----GKIPEAV 496
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E ++ T + + I P+ ++ LI A ++ EM+ GV P + T+N L
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D GR + + + EM +NGL PN +Y S++ A+ + + +++ +M K +
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +YN ++ + G D+AF + E MKS+ P T++ +I + ++SEAE
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN-GISPSIVTYNLLIKGLCNQSQISEAE 566
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ N + P+ +LI D + R+ + GI
Sbjct: 567 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 37/266 (13%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP-NMITYNNLLDTMGRAKRPWQVK 163
R D A++ ++ AG+ + + M G P N +YN ++ M RA R
Sbjct: 157 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 216
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EMT+ + PN TY +++ + + E S+ +M G++ + YN LL+
Sbjct: 217 EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGL 276
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM------------------------ITI- 258
G E + ++M +S+ PD +T+S + +TI
Sbjct: 277 CRAGRMGETSALLDEM-ASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIG 335
Query: 259 ---CS------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
CS C+ GKVS AE + ++ AG P + +LI Y + +
Sbjct: 336 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 395
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPK 334
++ I PD L+N + + +
Sbjct: 396 QMKSRHIKPDHITYNALINGLCKAER 421
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N + D +++TLI GN D L++ + M G+K + TY+ L+ +G A R
Sbjct: 574 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLI 633
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYREMKEK 207
+++ +Y++M N + P+ + ++ AY ++YG + + + +EM +K
Sbjct: 634 EMEYLYQKMMQNNVVPSNAIHNIMVEAY--SKYGNEIKAEDLRKEMLQK 680
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 6/268 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+ASK+ E + R K P+ F+ + Y G + L++ ++MK+ G+KP++
Sbjct: 504 KASKMDE-AIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDI 562
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TY ++D +AK + E+ NGL PN Y +L+ YGR D + +
Sbjct: 563 VTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDT 622
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
MK G+Q + YN+L+ G +E +F ++ + ++ +I G
Sbjct: 623 MKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQC-IVKDIELGVIGYTIIIQGFCKIG 681
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
K+ EA F EM G PN T+L+ Y K+ ++ + + + LGI PD
Sbjct: 682 KIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYN 741
Query: 324 CLLNVMTQTPKEELGKLVECVEKSNSKL 351
L++ + + L K+VE + +S++
Sbjct: 742 TLISGFCEV--DSLDKMVESPAEMSSQV 767
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 139/306 (45%), Gaps = 6/306 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++ +IK AG D + E++ G++P ++TYN L+D + ++ R + +
Sbjct: 210 DVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLK 269
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M + + P+ T+ L+ R + + +V +EM+ G+ + +YN ++
Sbjct: 270 GRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRK 329
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ EA ++F++M S+ + T++ + G++ AE + +EML AG + +
Sbjct: 330 GHCSEALKLFDEM-VSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSL 388
Query: 287 LTSLIQCYGKAQ-RTDDVVRALNRLPELGITPDDRF-CGCLLNVMTQTPKEELGKLVECV 344
S++ + + R D V+R + + + P+D C+ + EE ++ V
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQV 448
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI---SKDVKKAYCNCLIDLCVNLNLL 401
+ L +G+ KEAT++ ++ ++ + N +I C + +
Sbjct: 449 LGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508
Query: 402 ENACKL 407
+ A +L
Sbjct: 509 DEAIQL 514
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 117/259 (45%), Gaps = 3/259 (1%)
Query: 86 RASKLKEKSYDTRAR-NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+ + +KE + +A N +D ++ +I+ A D + + ++M G KP++
Sbjct: 469 QGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLF 528
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T+N L T + ++ + +M GL P+ TY +++ Y +A+ E+
Sbjct: 529 TFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL 588
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ G++ + +YN L+ G +A I + MK + QP T++S++ G
Sbjct: 589 MKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYN-GIQPTPVTYNSLMYWMCHAGL 647
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
V E +A+F + + E + T +IQ + K + D+ V + GI P+
Sbjct: 648 VEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTT 707
Query: 325 LLNVMTQTP-KEELGKLVE 342
L+ +++ KEE KL +
Sbjct: 708 LMFAYSKSGNKEEASKLFD 726
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 2/202 (0%)
Query: 117 LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSP 176
L GT G D L + EM A +KPN + + ++ + + I+ ++ GL
Sbjct: 397 LRGT-GRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGV 455
Query: 177 NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF 236
N T +L+ + ++ V + M G++L YN ++ C DEA ++
Sbjct: 456 NVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLR 515
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
+DM +PD +TF+ + GKV E + ++M G +P++ ++I Y K
Sbjct: 516 DDM-IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCK 574
Query: 297 AQRTDDVVRALNRLPELGITPD 318
A+ L L + G+ P+
Sbjct: 575 AKDMHKANEYLTELMKNGLRPN 596
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG-LSPNWNT 180
G+ + + E+ A G P++ T + L++ +G + + ++ EM D ++P+ +T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y ++++A RA + ++ E++ G+Q +V YN L+ G +EAF + M
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+P TF +I+ + + E A+ EM G PN + +I + +
Sbjct: 274 EGR-VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332
Query: 301 DDVVRALNRLPELGI 315
+ ++ + + GI
Sbjct: 333 SEALKLFDEMVSKGI 347
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 44/207 (21%)
Query: 93 KSYDTRARNE------KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
K+ D NE K + PNA ++ LI YG GN + + + MK G++P +
Sbjct: 574 KAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPV 633
Query: 145 TYNNLLDTMGRAKRPWQVKTIY-----------------------------------KEM 169
TYN+L+ M A +VK ++ KEM
Sbjct: 634 TYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 693
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+ PN TY +L+ AY ++ E+ ++ EM G+ YNTL++ +V
Sbjct: 694 HSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSL 753
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMI 256
D+ E +M SS+ + D ++++ +
Sbjct: 754 DKMVESPAEM-SSQVLKQDGCSYNAFV 779
>gi|449530158|ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 3/264 (1%)
Query: 89 KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
KL E Y+ A+ +K DP F LI +Y G+ + L + E MK + + +
Sbjct: 312 KLAEDLYN-EAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCA 370
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+++ + +Y+++ ++G P TYAS + AY R ++ EM+EKG
Sbjct: 371 IVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKG 430
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
V Y++L++M G +A + MK + CQP+ W ++ ++ + + +
Sbjct: 431 FDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE-KGCQPNVWIYNILMEMHGKAKNLKQV 489
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
E ++ EM P+ TS+I Y KA + + G T D F G ++ V
Sbjct: 490 EKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGV 549
Query: 329 MTQTPK-EELGKLVECVEKSNSKL 351
++T + +EL KL+ ++ ++L
Sbjct: 550 FSKTSRVDELVKLLRDMKLEGTRL 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F ++ Y T ++ + VYE++ G +P +TY + ++ R + + I+ EM
Sbjct: 368 FCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEME 427
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G Y+SL+ YG+ +D + + +MKEKG Q +V +YN L+ M
Sbjct: 428 EKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLK 487
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ +++++MK + PD +++S+I+ + + E + E G + +
Sbjct: 488 QVEKLWKEMK-RKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIM 546
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+ + K R D++V+ L + G D+R LN +
Sbjct: 547 VGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNAL 585
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 35/158 (22%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A+S+LI +YG G + + +MK G +PN+ YN L++ G+AK QV+ ++KEM
Sbjct: 437 AYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEM 496
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE-------------------------- 203
++P+ +Y S++ AY +A E YRE
Sbjct: 497 KRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRV 556
Query: 204 ---------MKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
MK +G +L LY T L D G +A
Sbjct: 557 DELVKLLRDMKLEGTRLDERLYRTALNALMDAGLQVQA 594
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 104/281 (37%), Gaps = 72/281 (25%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT---MGRAKRPWQVKTIY 166
AF ++ Y + V++ +K+ ++ + Y +++ +G ++R ++
Sbjct: 189 AFEAAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEV 248
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + + Y L + ++ ++L +R+M++KG+ T+Y+ L+ A +
Sbjct: 249 ESRISDSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASI 308
Query: 227 -----------------------------------GYTDEAFEIFEDMKS---------- 241
G ++A EI E MK
Sbjct: 309 QEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIF 368
Query: 242 ------------------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+ C+P T++S I G S+AE +F EM E
Sbjct: 369 CAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEE 428
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GF+ + +SLI YGK R D +R L ++ E G P+
Sbjct: 429 KGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPN 469
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I P+A F+TLI G + ++ EM G +PN+I+YN +++ + +
Sbjct: 159 KLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTI 218
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++++M N PN TY +++ + + R + + EM ++G+ V YNT+L
Sbjct: 219 MAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTIL 278
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+G +EA +F++M N PD+ TF+ ++ G VSEA + M E G
Sbjct: 279 HGFCSLGQLNEATRLFKEM-VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGA 337
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EPN + +L+ Y + D+ ++ L + G P+
Sbjct: 338 EPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T++ + + G + +++EM V P+ +T+N L+D + + + + +
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ MT+ G PN TY +L+ Y ++ + V M KG +++ YN L+
Sbjct: 330 ETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS 389
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA + +M S +N PD+ T+S+++ G+ EA +F EM +G P+L
Sbjct: 390 KRMNEAKRLLSEM-SEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMA 448
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+ L+ + K D+ ++ L + E I P+ L+ M K E+ K
Sbjct: 449 YSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAK 501
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++ LI Y + + + EM + P+ +TY+ L+ + + RP + +
Sbjct: 374 PNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNL 433
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+KEM +GL P+ Y+ LL + + + ++ L + +EM E+ ++ ++ LY L+
Sbjct: 434 FKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFI 493
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A E+F + S++ +PD WT++ MI G EA F +M + GF P+
Sbjct: 494 AGKLEVAKELFSKL-SADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSC 552
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRL 310
+IQ + + Q + ++ ++ +
Sbjct: 553 SYNVIIQGFLQNQDSSTAIQLIDEM 577
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 1/189 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V E M G +PN TYN L+D + + + M G +PN ++Y L+ Y
Sbjct: 328 VSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYC 387
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+++ + + EM EK + Y+TL+ VG EA +F++M SS PD
Sbjct: 388 KSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSS-GLLPDL 446
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+S ++ G + EA + EM E +PN+ + T LI+ A + + ++
Sbjct: 447 MAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSK 506
Query: 310 LPELGITPD 318
L GI PD
Sbjct: 507 LSADGIRPD 515
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STL++ G LN+++EM + G+ P+++ Y+ LLD + + +
Sbjct: 410 DTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLL 469
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + + PN Y L+R A E ++ ++ G++ + YN ++
Sbjct: 470 KEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKE 529
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +DEA+E F M+ + PDS +++ +I S A + +EM+ F +
Sbjct: 530 GLSDEAYEFFRKME-DDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD--- 585
Query: 287 LTSLIQCYGKAQRTDDVVRALNR 309
+S Q + D+++ R
Sbjct: 586 -SSTFQMLLDLESHDEIISRFMR 607
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 103/227 (45%), Gaps = 10/227 (4%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
D L + M + +P+++ + L ++ + K+ ++ +M G++ N +
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ R + + +SV +M + G+Q +NTL+ + G EA +F +M S
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+ +P+ +++++I G A +F +M + +PN+ ++I K + ++
Sbjct: 197 H-EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 304 VRALNRLPELGITPD--------DRFCGC-LLNVMTQTPKEELGKLV 341
V L+ + + GI PD FC LN T+ KE +G+ V
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNV 302
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
RI PN ++ LI+ AG + ++ ++ A G++P++ TYN ++ + + +
Sbjct: 476 RIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEA 535
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+++M D+G P+ +Y +++ + + + + + EM K + + LL
Sbjct: 536 YEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 117/230 (50%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D + Y EM G+ P+++TYN+++ + +A+ + +
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ P+ TY S+L Y + ++ + ++M+ G++ V Y+ L+
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +IF+ M + +P+ T+ +++ + +G + E + + M+ G P+ +V
Sbjct: 315 GRCMEARKIFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y K + D + +++ + G+ P+ G ++ ++ ++ + E
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 1/233 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FS LI Y G D + V+ +M+ G+ PN +TY ++ + ++ R +
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D GLSP Y SL+ E + EM ++G+ L+ +N+++
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E+ ++FE M +P+ T++++I GK+ EA + + M+ G +PN
Sbjct: 490 GRVIESEKLFELMVRI-GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
++LI Y K R +D + + G++PD +L + QT + K
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++TLI Y AG D + + M ++G+KPN +TY+ L++ + R
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++KEM +G+SP+ TY +L+ + R +Y + E G Q+ ++ YN +L
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
TD+A ++F+++ + + ++ TF+ MI G+ EA+ +F G PN
Sbjct: 627 CKNKLTDDALQMFQNL-CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 123/271 (45%), Gaps = 6/271 (2%)
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
P T S Y+ N + A K+ +D+ + + + + TL++ Y T G
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKI----FDSMTK-RGLKPEITTYGTLLQGYATKGALV 353
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + M G+ P+ ++ L+ + + Q ++ +M GL+PN TY +++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
++ ED + + +M ++G+ +YN+L+ + A E+ +M C
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
++ F+S+I G+V E+E +F M+ G +PN+ +LI Y A + D+ ++
Sbjct: 474 L-NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
L+ + +G+ P+ L+N + + E
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 5/227 (2%)
Query: 104 WRIDPNAFSTLIK-LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+R+D AF+ L+K L D V M +G PN+ +YN LL + R +
Sbjct: 118 FRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEA 177
Query: 163 KTIYKEMTDN---GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ M D+ G P+ +Y +++ + + + S Y EM ++G+ V YN++
Sbjct: 178 LELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSI 237
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+A D+A E+ M + PD T++S++ G+ EA +M G
Sbjct: 238 IAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
EP++ + L+ K R + + + + + G+ P+ G LL
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 6/239 (2%)
Query: 108 PNAFSTLIKLYGTAGNFDG-----CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
PN FS I L G L++ + + G P++++Y +++ + +
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ Y EM D G+ P+ TY S++ A +A+ + + V M + G+ YN++L
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G EA + M+ S+ +PD T+S ++ G+ EA +F+ M + G +P
Sbjct: 276 YCSSGQPKEAIGFLKKMR-SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ +L+Q Y ++ L+ + GI PD L+ + K + LV
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 13/263 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+++I + G ++E M IGVKPN+ITYN L++ A + + + M
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL PN TY++L+ Y + ED L +++EM+ G+ + YN +L T
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS-EAEAMFNEMLEAGFEPNLFVLTS 289
A E++ ++ +E+ + ++I C+ K++ +A MF + +
Sbjct: 599 AAKELY--VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD---DRFCGCLLNVMTQTPKEELGKLVECVEK 346
+I K R D+ G+ P+ R N++ Q EEL +L +E
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA--ENIIGQGLLEELDQLFLSMED 714
Query: 347 S-----NSKLGYVVKLLLEEQDI 364
+ + L ++V+ LL+ +I
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEI 737
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI--FEDMK--SSENCQPDSW 250
ED V+ E+ +G S+ N LA DV A + + M ++ PD
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALA---DVARDSPAAAVSRYNRMARAGADEVTPDLC 88
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR-ALNR 309
T+ +I C G++ A +++ GF + T L++ +RT D + L R
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 310 LPELGITPD 318
+ ELG P+
Sbjct: 149 MTELGCIPN 157
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 2/234 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ ++ G D L V++EMK G+ P +YN+L+ +A + ++ M
Sbjct: 348 SYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHM 407
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G SPN T+ + YG++ + Y MK KG+ V N +L A G
Sbjct: 408 NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRL 467
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A +F ++K+ PD+ T++ MI CS K EA F++M+E+G P++ L S
Sbjct: 468 GMAKRVFYELKAM-GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNS 526
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
LI K + ++ + ++L E+ I P + LL+ + + K +E+ +L+E
Sbjct: 527 LIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLE 580
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ ++ G + + L V +EM G + +TYN ++ + ++KR Q +Y
Sbjct: 800 DEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLY 859
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G SP TY LL ++ D +++ EM E G + + T+YN LL
Sbjct: 860 YNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIA 919
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T+ ++FE M + PD +++ +I G++++ F ++ E G EP+L V
Sbjct: 920 GNTENVCQLFEKM-VEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIV 978
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI GK++R ++ V N + + GI P+
Sbjct: 979 YNLLIDGLGKSERIEEAVSLFNEMKKKGIIPN 1010
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 8/256 (3%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++ + K +GV +YN+L+ + + ++ EM G P+ TY +L A G
Sbjct: 753 LFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMG 812
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++ E+ L V +EM KG + + YNT+++ ++A +++ ++ S E P
Sbjct: 813 KSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS-EGFSPTP 871
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T+ ++ GK+ +AE +FNEMLE G EPN + L+ + A T++V + +
Sbjct: 872 CTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEK 931
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFK 369
+ E GI PD + L++ + + G C + +LG L++ I+G K
Sbjct: 932 MVEQGINPDIKSYTILIDTLCTAGRLNDGL---CYFRQLHELGLEPDLIVYNLLIDGLGK 988
Query: 370 ----KEATELFNSISK 381
+EA LFN + K
Sbjct: 989 SERIEEAVSLFNEMKK 1004
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 176/417 (42%), Gaps = 25/417 (5%)
Query: 108 PNAFSTL--IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ + I YG +G + YE MK+ G+ P++ N +L ++ + R K +
Sbjct: 414 PNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRV 473
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ G+SP+ TY +++ +A ++ ++ + +M E G V N+L+
Sbjct: 474 FYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYK 533
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA+++F +K + +P + T++++++ GKV E + EM + PNL
Sbjct: 534 GGKGNEAWQLFHKLKEMK-IEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLI 592
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+++ C K + + L + E G PD ++ + + + E + C
Sbjct: 593 TYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM 652
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENAC 405
K Y + ++ KEA +++ + + KA CN +D +L+E
Sbjct: 653 KKILAPDYATLCTILPSFVKNGLMKEA---LHTVKEYILKAGCN--VDKSSFHSLMEGIL 707
Query: 406 KLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLL 465
K + ++E +I SR L L H+ + KALE+ + F
Sbjct: 708 KKAGVEKSIEFAENIASRGILLNDFFLCPL-------IRHLCKH--KKALEAHQLFNKFK 758
Query: 466 GINTGHGKHKYS-------DKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKS 515
G+ Y+ D+ L + E E+ PD+ + L +A KS
Sbjct: 759 GLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKR-LGCGPDEFTYNLILDAMGKS 814
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 4/272 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+T+ G G M+ G+ N TYN L+ + ++ + +YK M
Sbjct: 139 FATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMV 198
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G+SP+ TY+ L+ A+G+ R + L + EM+ +G++ +V Y + + D
Sbjct: 199 EDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFD 258
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+ I M+ S C+PD T + +I + G++S+A+A+F +M + +P+ +L
Sbjct: 259 EAYHILGKMEDS-GCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITL 317
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVECVEKSN 348
+ G + + VV N + G + +++ + Q + E L E EK
Sbjct: 318 LDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGM 377
Query: 349 SKLGYVVKLLLEEQDIEGDFKKEATELFNSIS 380
S Y L+ ++ D A ELFN ++
Sbjct: 378 SPEQYSYNSLI-SGFLKADMFDRALELFNHMN 408
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S I++ G A FD ++ +M+ G KP+++T+ ++ + A R
Sbjct: 233 EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRL 292
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M + P+ TY +LL G + + + V+ M G ++ Y +
Sbjct: 293 SDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAV 352
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ VG DEA +F++MK + P+ ++++S+I+ A +FN M G
Sbjct: 353 VDALCQVGRVDEALAVFDEMK-EKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACG 411
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN + I YGK+ ++ ++ + GI PD
Sbjct: 412 PSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPD 450
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+E + P + L+ +G N++ EM G +PN YN LL+ A
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTE 923
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
V ++++M + G++P+ +Y L+ A D L +R++ E G++ + +YN L+
Sbjct: 924 NVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLI 983
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+EA +F +MK + P+ +T++S+I GK +EA M+ E+L G+
Sbjct: 984 DGLGKSERIEEAVSLFNEMKK-KGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGW 1042
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P++F +LI+ Y + TD+ A ++ G P+
Sbjct: 1043 KPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPN 1080
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 36/263 (13%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+++Y + E P+ + +I++ AG V+ +MKA KP+ +TY L
Sbjct: 258 DEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITL 317
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
LD G + V ++ M +G + N +Y +++ A + ++ L+V+ EMKEKGM
Sbjct: 318 LDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGM 377
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS---------------------------- 241
YN+L++ D A E+F M +
Sbjct: 378 SPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQ 437
Query: 242 ------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
S+ PD ++++ + G++ A+ +F E+ G P+ T +I+C
Sbjct: 438 RYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCS 497
Query: 296 KAQRTDDVVRALNRLPELGITPD 318
KA + D+ + + + E G PD
Sbjct: 498 KASKADEAMNFFSDMVESGCVPD 520
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI TAG + L + ++ +G++P++I YN L+D +G+++R + +++
Sbjct: 940 DIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLF 999
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN TY SL+ G+A + +Y E+ KG + SV YN L+ +
Sbjct: 1000 NEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVS 1059
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
G TD A+ + M CQP+S T+ +
Sbjct: 1060 GSTDNAYAAYGQMIVG-GCQPNSSTYMQL 1087
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 71 GSSPKSY---IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G SP Y +++N LK +++ D A + ++ +G
Sbjct: 411 GPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMA 470
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
V+ E+KA+GV P+ ITY ++ +A + + + +M ++G P+ SL+
Sbjct: 471 KRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDT 530
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ G + ++ ++KE ++ + YNTLL+ G E ++ E+M + P
Sbjct: 531 LYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIY-PP 589
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+++++ S G+V+ A M M E G P+L +++ K +R ++ R
Sbjct: 590 NLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMF 649
Query: 308 NRLPELGITPD 318
++ ++ + PD
Sbjct: 650 CQMKKI-LAPD 659
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 23/244 (9%)
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+R + + + ++ + K G+ L YN+L+ D D A ++F +MK
Sbjct: 737 LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL- 795
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
C PD +T++ ++ +V E + EM G+E ++I K++R +
Sbjct: 796 GCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQA 855
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGY-------VVK 356
+ L G +P G LL+ + ++ GK+V+ N L Y +
Sbjct: 856 IDLYYNLMSEGFSPTPCTYGPLLDGLLKS-----GKMVDAENLFNEMLEYGCEPNCTIYN 910
Query: 357 LLLEEQDIEGDFKKEATELF-----NSISKDVKKAYCNCLIDLCVNLNLLENAC---KLL 408
+LL I G+ + +LF I+ D+ K+Y + LC L + C +L
Sbjct: 911 ILLNGHRIAGN-TENVCQLFEKMVEQGINPDI-KSYTILIDTLCTAGRLNDGLCYFRQLH 968
Query: 409 ELGL 412
ELGL
Sbjct: 969 ELGL 972
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 119/232 (51%), Gaps = 13/232 (5%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K R +P+ ++ L++ + AG V+++MK G++PN+ TY+ ++D + R +
Sbjct: 248 KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ +M D+G +PN T+ +L+R + +A E L VY +MK+ G + YN L+
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 221 -AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
C D + A ++ M + C+ ++ TF+++ + V+ A M+++M+EA
Sbjct: 368 ETHCRDENL-ENAVKVLNTM-IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
EPN L++ + ++ TD V++ + + + P+ FCG
Sbjct: 426 CEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCG 477
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 115/221 (52%), Gaps = 4/221 (1%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
+R++ + P+ ++ +I L G FD ++ + MK+ V+ ++ T+ L+ RA
Sbjct: 142 SRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGL 201
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + M D G P+ ++ ++ R R + S + +K++ + V +Y
Sbjct: 202 ASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTN 260
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLE 277
L+ G EA ++F+DMK + +P+ +T+S +I +C C G++S A +F +ML+
Sbjct: 261 LVRGWCRAGEISEAEKVFKDMKLA-GIEPNVYTYSIVIDALCRC-GQISRAHDVFADMLD 318
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+G PN +L++ + KA R + V++ N++ +LG PD
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPD 359
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 39/211 (18%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR---------- 155
PNA F+ L++++ AG + L VY +MK +G +P+ ITYN L++T R
Sbjct: 323 PNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKV 382
Query: 156 ----AKRPWQVKT---------------------IYKEMTDNGLSPNWNTYASLLRAYGR 190
K+ +V +Y +M + PN TY L+R +
Sbjct: 383 LNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAG 442
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
++ + L + ++M +K ++ +V Y L+ M +G+ + A+++F++M E C S
Sbjct: 443 SKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM-VEEKCLTPSL 501
Query: 251 TFSSMITICSCR-GKVSEAEAMFNEMLEAGF 280
+ M+ R G++ + E + +M++ G
Sbjct: 502 SLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K ++ + F+T+ + + +G +Y +M +PN +TYN L+ +K
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDM 448
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLL 220
V + K+M D + PN NTY L+ + + + +++EM +EK + S++LY +L
Sbjct: 449 VLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508
Query: 221 AMCADVGYTDEAFEIFEDM 239
A G + E+ E M
Sbjct: 509 AQLRRAGQLKKHEELVEKM 527
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 3/264 (1%)
Query: 89 KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
KL E Y+ A+ +K DP F LI +Y G+ + L + E MK + + +
Sbjct: 312 KLAEDLYN-EAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCA 370
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+++ + +Y+++ ++G P TYAS + AY R ++ EM+EKG
Sbjct: 371 IVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKG 430
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
V Y++L++M G +A + MK + CQP+ W ++ ++ + + +
Sbjct: 431 FDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE-KGCQPNVWIYNILMEMHGKAKNLKQV 489
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
E ++ EM P+ TS+I Y KA + + G T D F G ++ V
Sbjct: 490 EKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGV 549
Query: 329 MTQTPK-EELGKLVECVEKSNSKL 351
++T + +EL KL+ ++ ++L
Sbjct: 550 FSKTSRVDELVKLLRDMKLEGTRL 573
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F ++ Y T ++ + VYE++ G +P +TY + ++ R + + I+ EM
Sbjct: 368 FCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEME 427
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G Y+SL+ YG+ +D + + +MKEKG Q +V +YN L+ M
Sbjct: 428 EKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLK 487
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ +++++MK + PD +++S+I+ + + E + E G + +
Sbjct: 488 QVEKLWKEMK-RKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIM 546
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+ + K R D++V+ L + G D+R LN +
Sbjct: 547 VGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNAL 585
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 35/158 (22%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A+S+LI +YG G + + +MK G +PN+ YN L++ G+AK QV+ ++KEM
Sbjct: 437 AYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEM 496
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE-------------------------- 203
++P+ +Y S++ AY +A E YRE
Sbjct: 497 KRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRV 556
Query: 204 ---------MKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
MK +G +L LY T L D G +A
Sbjct: 557 DELVKLLRDMKLEGTRLDERLYRTALNALMDAGLQVQA 594
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 106/281 (37%), Gaps = 72/281 (25%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
AF ++ Y + V++ +K+ ++ + Y +++ + +V ++ E+
Sbjct: 189 AFEAAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEV 248
Query: 170 TDN-GLSPNWNT--YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+S ++T Y L + ++ ++L +R+M++KG+ T+Y+ L+ A +
Sbjct: 249 ESRISVSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASI 308
Query: 227 -----------------------------------GYTDEAFEIFEDMKS---------- 241
G ++A EI E MK
Sbjct: 309 QEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIF 368
Query: 242 ------------------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+ C+P T++S I G S+AE +F EM E
Sbjct: 369 CAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEE 428
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GF+ + +SLI YGK R D +R L ++ E G P+
Sbjct: 429 KGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPN 469
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+ Y G +N+ EM G +++TYN +L + + K + ++
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EMT+ L P+ T L+ + + ++ + ++++MKEK ++L V YNTLL V
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A EI+ DM S E P ++S ++ +G ++EA +++EM+ +P + +
Sbjct: 529 GDIDTAKEIWADMVSKE-ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+I+ Y ++ D L ++ G PD
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 181/414 (43%), Gaps = 51/414 (12%)
Query: 86 RASKLKEKSYD-TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A KL+E T R++ + + +A + LI G + VY+E+ GV N+
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVY 236
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T N +++ + + + +V T ++ + G+ P+ TY +L+ AY E+ + M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
KG V YNT++ G + A E+F +M S PDS T+ S++ +G
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGD 355
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD----- 319
V E E +F++M P+L +S++ + ++ D + N + E G+ PD+
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 320 ---RFC------------------GCLLNVMTQT-------PKEELGK----LVECVEKS 347
+C GC ++V+T ++ LG+ E E++
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKL 407
Y + +L++ G+ + A ELF + + + +D+ LL+ K+
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQN-AMELFQKMKEKRIR------LDVVTYNTLLDGFGKV 528
Query: 408 LELGLTLEVYTDIQSR----SPTQWSLHLKSL-SLGAALTALHIWINDLSKALE 456
++ E++ D+ S+ +P +S+ + +L S G A +W +SK ++
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ + ++ R+D ++TL+ +G G+ D ++ +M + + P I+Y+ L++ +
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ EM + P S+++ Y R+ D S +M +G YN
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
TL+ +AF + + M+ + PD +T++S++ + ++ EAE + +M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
E G P+ T +I + + R + + + G +PDD+F
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 102/223 (45%), Gaps = 3/223 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + LI + GN + ++++MK ++ +++TYN LLD G+ K I+
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + P +Y+ L+ A + + V+ EM K ++ +V + N+++
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE--AGFEPNL 284
G + E M SE PD +++++I +S+A + +M E G P++
Sbjct: 599 GNASDGESFLEKM-ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
F S++ + + + + L ++ E G+ PD C++N
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 74/165 (44%), Gaps = 1/165 (0%)
Query: 177 NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF 236
N + + L+R Y +AR + + ++ KG +S+ N L+ +G+ + A+ ++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 237 EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
+++ S + +T + M+ GK+ + +++ E G P++ +LI Y
Sbjct: 224 QEI-SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 297 AQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
++ +N +P G +P ++N + + K E K V
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
>gi|410110063|gb|AFV61111.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
barbata]
Length = 364
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 120 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 179
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 180 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 239
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 240 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 294
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +V +++ LG PD +LN
Sbjct: 295 VKDITVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLN 341
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 55 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 114
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 115 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 174
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 175 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 233
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 267
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ ++++ +K G P+++ YN +++ G+AK + +++ EM G+ PN +Y+
Sbjct: 2 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYS 61
Query: 183 SLLRAYGRARYGEDTLSVYREMKE-----------------------------------K 207
+LL Y + + LSV+ EM+E
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++ +V YNTLL + D EA +F M+ +N + + T++SM+ I + +
Sbjct: 122 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEK 180
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A + EM G EPN +++I +GK + D +L G+ D
Sbjct: 181 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 231
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 50/115 (43%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 249 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 308
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ K+ V ++ +M G P+ N A +L AYG+ + VY EM+E G
Sbjct: 309 SKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLNAYGKLXEFDKANDVYMEMQEVG 363
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 110/220 (50%), Gaps = 3/220 (1%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + PN FSTL+ + + +++EM +G +P++ITY+ +++ + +
Sbjct: 40 KLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTT 99
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ K+M + G PN Y++++ + + + + + EM +G+ +V Y+++L
Sbjct: 100 MAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSIL 159
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
++G ++EA +F+ M N PD+ TF+ ++ S G + EA+ +F M+E G
Sbjct: 160 HGFCNLGRSNEATSLFKQM-VERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV 218
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EPN+ +L+ Y + D+ + N + G P R
Sbjct: 219 EPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVR 258
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 108/215 (50%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ D +ST+I G+ + + ++M+ G KPN++ Y+ ++D++ + K +
Sbjct: 78 YEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAM 137
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
EM + G+SPN TY+S+L + + S++++M E+ + +N L+
Sbjct: 138 EFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGL 197
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G EA +FE M + +P+ T+++++ + ++ EA+ +FN M+ G P+
Sbjct: 198 SKEGMILEAQCVFETM-IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPS 256
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI+ + K+ R D+ L + +TPD
Sbjct: 257 VRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPD 291
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 108/228 (47%), Gaps = 7/228 (3%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN ++ L+ Y + D ++ M G P++ +YN L+ ++ R + K
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAK 277
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM+ L+P+ TY++L++ + + +D + EM+ G+ + Y+ +L
Sbjct: 278 GLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGL 337
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G+ DEAFE+ + M+ S+ +P+ + ++ +I GK+ A +F+ + G +P+
Sbjct: 338 CKQGHLDEAFELLKAMQESK-IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPD 396
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ T +I K +++ + G P+ C NV+ Q
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNS----CTYNVIIQ 440
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 3/190 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+E M GV+PN+ TYN L+D + + + ++ M G +P+ +Y L++ +
Sbjct: 209 VFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHC 268
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPD 248
++ ++ + EM K + Y+TL+ C D G +A ++ E+M+S PD
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD-GRPQDAQKLLEEMRSY-GLLPD 326
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T+S ++ +G + EA + M E+ EPN+F+ T LIQ + + +
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFS 386
Query: 309 RLPELGITPD 318
L GI PD
Sbjct: 387 NLFVKGIQPD 396
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ LIK + +G D + EM + P+ +TY+ L+ + RP + + +EM
Sbjct: 259 SYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM 318
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
GL P+ TY+ +L + + ++ + + M+E ++ ++ +Y L+ + G
Sbjct: 319 RSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKL 378
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ A E+F ++ + QPD T++ MI+ G +EA +F +M G PN
Sbjct: 379 EAARELFSNL-FVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNV 437
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
+IQ + + T + R + + G + D
Sbjct: 438 IIQGFLRNGDTSNAGRLIEEMVGRGFSAD 466
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STL+K + G + EEM++ G+ P+++TY+ +LD + + + +
Sbjct: 291 DTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELL 350
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
K M ++ + PN Y L++ G +G E ++ + KG+Q V Y +++
Sbjct: 351 KAMQESKIEPNIFIYTILIQ--GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL 408
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++EA E+F DM + C P+S T++ +I G S A + EM+ GF +
Sbjct: 409 KGGLSNEACELFRDM-AVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSAD- 466
Query: 285 FVLTSLIQCYGKAQRTDDVV 304
+S Q + D+++
Sbjct: 467 ---SSTFQMLSDLESRDEII 483
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y G +G + + +MK+ +KP+ ITYN L++ + +A+R + + EM
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
DNG++P T+ +L+ AYGR E V EM+E G++ +V Y +++ G
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA I +DM ++ P++ ++++I G +A + +M G P++ L
Sbjct: 498 EAVAILDDM-FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 556
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I+ + + +N L + PD
Sbjct: 557 IKGLCNQSQISEAEEIINSLSNHRLIPD 584
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI YG G + C V EM+ G+KPN+++Y ++++ + + + I +M
Sbjct: 448 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ PN Y +++ AY + + +MK G+ S+ YN L+ +
Sbjct: 508 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 567
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA EI + S+ PD+ +++++I+ C RG + +A + M + G + + L
Sbjct: 568 EAEEIINSL-SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 626
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
I G A R +++ ++ + + P + + N+M +
Sbjct: 627 ISGLGGAGRLNEMEYLYQKMMQNNVVPSN----AIHNIMVEA 664
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 41/269 (15%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I + G+ + + ++M G+KPN ITYN LL + RA R + + EM
Sbjct: 238 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 297
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL------------------- 211
+ P+ TY+ L R + LS++ + + G+ +
Sbjct: 298 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVS 357
Query: 212 ----------------SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ +YNTL+ G + AF F MK S + +PD T++++
Sbjct: 358 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK-SRHIKPDHITYNAL 416
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I +++ A+ + EM + G P + +LI YG+ + + L+ + E G+
Sbjct: 417 INGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 476
Query: 316 TPDDRFCGCLLNVMTQTPKEELGKLVECV 344
P+ G ++N + GK+ E V
Sbjct: 477 KPNVVSYGSIVNAFCKN-----GKIPEAV 500
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E ++ T + + I P+ ++ LI A ++ EM+ GV P + T+N L
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D GR + + + EM +NGL PN +Y S++ A+ + + +++ +M K +
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +YN ++ + G D+AF + E MKS+ P T++ +I + ++SEAE
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN-GISPSIVTYNLLIKGLCNQSQISEAE 570
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ N + P+ +LI D + R+ + GI
Sbjct: 571 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 37/266 (13%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP-NMITYNNLLDTMGRAKRPWQVK 163
R D A++ ++ AG+ + + M G P N +YN ++ M RA R
Sbjct: 161 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 220
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EMT+ + PN TY +++ + + E + +M G++ + YN LL+
Sbjct: 221 EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGL 280
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM------------------------ITI- 258
G E + ++M +S+ PD +T+S + +TI
Sbjct: 281 CRAGRMGETSALLDEM-ASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 339
Query: 259 ---CS------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
CS C+ GKVS AE + ++ AG P + +LI Y + +
Sbjct: 340 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 399
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPK 334
++ I PD L+N + + +
Sbjct: 400 QMKSRHIKPDHITYNALINGLCKAER 425
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N + D +++TLI GN D L++ + M G+K + TY+ L+ +G A R
Sbjct: 578 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 637
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYREMKEK 207
+++ +Y++M N + P+ + ++ AY ++YG + + + +EM +K
Sbjct: 638 EMEYLYQKMMQNNVVPSNAIHNIMVEAY--SKYGNEIKAEDLRKEMLQK 684
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA ++ P L+ Y +G V M+ G+ P++ N LL + RA
Sbjct: 164 RALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRAD 223
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + + M G+SP+ TY++L+ AY + R + V EM+E+G L+ YN
Sbjct: 224 AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYN 283
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEML 276
L+A G +EAF +DM+ PD +T+ ++I +C R + +EA+A+ +EM
Sbjct: 284 VLIAGLCRSGAVEEAFGFKKDMEDY-GLVPDGFTYGALINGLCKSR-RSNEAKALLDEMS 341
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A +PN+ V +LI + + D+ + + + G+ P+
Sbjct: 342 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN 383
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 136/277 (49%), Gaps = 4/277 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI + GN D + +EM A GV+PN ITY+NL+ + + + +
Sbjct: 345 LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRAS 404
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ K+M + P+ TY ++ + R +D + EM+ G+ +V Y+ ++
Sbjct: 405 LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 464
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++A ++ E+M +++ +P+++ ++ +I+ G VS A +F++M + P+
Sbjct: 465 CQSGEPEKASDLLEEM-TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 523
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFCGCLLNVMTQTPKEELGKLVE 342
L+ SLI K R ++ + ++ E G+ P++ + G + + E +LV+
Sbjct: 524 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 583
Query: 343 CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
+ + K V+ + L E + D ++ + F S+
Sbjct: 584 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 2/218 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM+ G+ PN+ TY+ ++ + ++ P + + +EMT GL PN YA L+ Y R
Sbjct: 444 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREG 503
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
++ +M + + + YN+L+ + VG +E+ + F M+ P+ +T+
Sbjct: 504 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE-RGLLPNEFTY 562
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
S +I G + AE + ML+ G +PN + L++ Y K+ + V + +
Sbjct: 563 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 622
Query: 313 LGITPDDRFCGCLLNVMTQTPKEELG-KLVECVEKSNS 349
G+ D+R G L++ ++ + E +++ +EK+ S
Sbjct: 623 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS 660
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+S A+ ++ + PN F S LI Y G+ + + + M G+KPN + Y +L
Sbjct: 541 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 600
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L++ ++ +V + +K M D G+ + Y L+ + E V +++ G
Sbjct: 601 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS 660
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
V +Y++L++ ++AF I ++M S + P+ ++++I G +S A
Sbjct: 661 VPDVHVYSSLISGLCKTADREKAFGILDEM-SKKGVDPNIVCYNALIDGLCKSGDISYAR 719
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+FN +L G PN TSLI K + N + GITPD
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 768
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + +S+LI + + + +EM GV PN++ YN L+D + ++ + ++
Sbjct: 663 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 722
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ GL PN TY SL+ + + +Y EM G+ +Y+ L C+
Sbjct: 723 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 782
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A + E+M + S F++++ RGK+ E + + ++ G PN
Sbjct: 783 GDLEQAMFLIEEMFLRGHASISS--FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 840
Query: 287 LTSLIQCYGKAQRTDDV 303
+ ++I +A + +V
Sbjct: 841 IENIISGLSEAGKLSEV 857
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 115/290 (39%), Gaps = 45/290 (15%)
Query: 70 TGSSPKSYIWVNPKSPRASKLKEKSYDT------RARNEKWRIDPNAFSTLIKLYGTAGN 123
G SP Y + + + K + +DT R ++ ++ LI +G
Sbjct: 238 AGISPDVYTY---STLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 294
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+ ++M+ G+ P+ TY L++ + +++R + K + EM+ L PN YA+
Sbjct: 295 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 354
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD------------- 230
L+ + R ++ + +EM G+Q + Y+ L+ +G D
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414
Query: 231 ----------------------EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+AF + +M+++ P+ +T+S MI G+ +A
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA-GISPNVYTYSIMIHGLCQSGEPEKA 473
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EM G +PN FV LI Y + +++ ++ + PD
Sbjct: 474 SDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 523
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 8/197 (4%)
Query: 147 NNLLDTMGRA--KRPWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
N LL M RA P + +I++ ++D+G SP L+ Y ++ +D V
Sbjct: 142 NGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPA--VLDVLVDTYKKSGRVQDAAEVVLM 199
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCR 262
M+++GM S+ N LL +++ E M + PD +T+S++I C R
Sbjct: 200 MRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA-GISPDVYTYSTLIEAYCKVR 258
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
+ A+ + EM E G N LI ++ ++ + + G+ PD
Sbjct: 259 -EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTY 317
Query: 323 GCLLNVMTQTPKEELGK 339
G L+N + ++ + K
Sbjct: 318 GALINGLCKSRRSNEAK 334
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K ++PNA F+TLI + A F ++ EM GV P + YN+L+D R+
Sbjct: 284 KSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQ 343
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +Y+EMT GL P+ T + ++R + ++E G+ L+ YN L+
Sbjct: 344 EALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALI 403
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+G +EA M + +P+ ++SS+I S RGK+ A A++ EM+ G
Sbjct: 404 DEYCRIGNLEEALATCTRM-TEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGI 462
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EPN+ T+LI + K D R + E GI+P+
Sbjct: 463 EPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPN 500
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A L+ G D L V+ ++ + P + N +LD + +A+RP ++ EM
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFRRLRTL---PALPACNAVLDGLVKARRPGCAWELFDEM 177
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
GL P+ TY +L+ A V+ +M + + +V Y T++ + G
Sbjct: 178 LRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCI 237
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A +F+ MK + QP+ +T++ +++ R V+ A ++ E+L++G PN + T+
Sbjct: 238 GDAERLFDAMKEA-GMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTT 296
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITP 317
LI + KA+R + +P G+ P
Sbjct: 297 LIDGFCKAKRFSEAKGMFLEMPRFGVAP 324
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ A++ LI Y GN + L M +G++PN+++Y++L+D + + I
Sbjct: 394 LNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAI 453
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
Y EM G+ PN TY +L+ + + + +++EM E G+ + + L+ +C
Sbjct: 454 YTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCR 513
Query: 225 D------VGYTDE--------AFEIFEDMKSSENCQ-PDSWTFSSMITICSCRGKVSEAE 269
+ V + E +F + E C P+S + ++I G+ EA
Sbjct: 514 ENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAG 573
Query: 270 AMFNEMLEAGFEPNLFVLTSLI--QC 293
+F+ M ++G P+ F T LI QC
Sbjct: 574 KLFSYMRKSGMIPDSFTYTLLIRGQC 599
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 6/204 (2%)
Query: 126 GCL-NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
GC +++EM G+ P+++TYN L++ + + ++ +M + PN TY ++
Sbjct: 168 GCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTM 227
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSE 243
+ A D ++ MKE GMQ + YN L++ + A +++++ KS
Sbjct: 228 ICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGL 287
Query: 244 NCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
N P++ F+++I C + + SEA+ MF EM G P + V SL+ ++ +
Sbjct: 288 N--PNAVIFTTLIDGFCKAK-RFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQE 344
Query: 303 VVRALNRLPELGITPDDRFCGCLL 326
+ + LG+ PD+ C ++
Sbjct: 345 ALALYQEMTRLGLCPDEFTCSIVV 368
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
GV N YN L+D R + MT+ G+ PN +Y+SL+ + + +
Sbjct: 391 GVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIA 450
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+++Y EM KG++ +V Y L+ A G D AF + ++M + P++ T S ++
Sbjct: 451 MAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIEN-GISPNAITVSVLVD 509
Query: 258 ICSCRGKVSEA 268
+V EA
Sbjct: 510 GLCRENRVQEA 520
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 88 SKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K KE KS+ T RN + D + ++T+I + G L + EMK +KPN+ITY
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+ + + K + EM G SP+ T+ +L+A ++R + L ++ M
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ +T+YNTLL + G T +A + E+M S PD+ TF+++I +
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS-GIAPDTITFNALILGHCKSSHLD 746
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
A A + +ML PN+ +L+ R + L + + G+ P++
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+DPN ++ I Y + ++YE M GV +++T + L+ + R R +
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM G +PN TY +L+ + +A G++ LS+ EM +G+ + + Y L+
Sbjct: 295 ALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G TDE + S+N P+ T++ +I V EAE + EM E PN
Sbjct: 355 GKQGKTDEVKDTLR-FALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ +S+I + K D + E GI P+ G L++
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLID 457
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 3/199 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++TLI Y G+ L+V + M A G+ +++ YN L+ RA + + +
Sbjct: 167 LDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGV 226
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCA 224
M + G+ PN TY + Y R + E+ +Y M G+ L V + L+A +C
Sbjct: 227 LDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR 286
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D G EA+ +F +M P+ T+ ++I + G+ E ++ EM+ G +L
Sbjct: 287 D-GRFSEAYALFREMDKV-GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDL 344
Query: 285 FVLTSLIQCYGKAQRTDDV 303
T+L+ GK +TD+V
Sbjct: 345 VTYTALMDWLGKQGKTDEV 363
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI + + + D Y +M + PN+ T+N LL + R + T+
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +GL PN TY L +G+ + + +Y EM KG V+ YN L++
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E+F+DM+ P S T+ +++ S +E + +M E GF P+
Sbjct: 848 GMMTQAKELFKDMQ-KRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
L+ + + + K T R L L
Sbjct: 907 LSFICRAFSKPGMTWQAQRLLKNL 930
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 10/305 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y+ RN +D S L+ G F ++ EM +G PN +TY L+D++
Sbjct: 262 YEGMVRNGVL-LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+A R ++ ++ EM G+ + TY +L+ G+ ++ R + +
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGV 380
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
Y L+ DEA ++ +M+ ++ P+ TFSS+I RG + +A
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEE-KSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M E G PN+ +LI + K Q D + + + G+ + L+N + Q K
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499
Query: 335 -EELGKLVECVEKSNSKLGYV-----VKLLLEEQDIEGDFKKEATELFNSISKD--VKKA 386
EE L + S L +V + L + D+ FK + ++ D V
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559
Query: 387 YCNCL 391
+ NCL
Sbjct: 560 FINCL 564
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 124/277 (44%), Gaps = 38/277 (13%)
Query: 90 LKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L +K+ + + ++ I+PN + TLI + D L VY +M GVK N +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA-------RYGEDTL-- 198
+L++ + + + + ++K+ + +GLS + Y +L+ +A ++G++ +
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 199 --------------------------SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
S EM+ G++ + YNT++ G T +A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
++ +MK S + +P+ T+++++ G V +A+ + NEM+ AGF P+ ++Q
Sbjct: 609 LKLLHEMKMS-SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+++R D ++ + G+ D LL V+
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A +D ++TLI AG+ +E+ + P+ + YN ++ + +
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGK 569
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ K+ EM + GL P+ +TY +++ ++ R L + EMK ++ ++ YNT
Sbjct: 570 FKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNT 629
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+A G ++A + +M S+ P S T ++ CS ++ + M+ A
Sbjct: 630 LVAGLFGTGAVEKAKYLLNEMVSA-GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688
Query: 279 GFEPNLFVLTSLIQ--CYGKAQRTDDVVRALNRLPELGITPD 318
G ++ V +L+Q CY R VV L + GI PD
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVV--LEEMLGSGIAPD 728
>gi|328768990|gb|EGF79035.1| hypothetical protein BATDEDRAFT_90007 [Batrachochytrium
dendrobatidis JAM81]
Length = 761
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ LI + A L + ++ +G+ P+++ YN+LLD+ RA ++ M
Sbjct: 138 LTQLIHINAIAKRPKQALESFNHIEKVGLTPDVVAYNHLLDSYSRAGDLNGAVAVFSRMQ 197
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ ++++L+ A R +Y EMK K +Q + +Y TL+ CA
Sbjct: 198 TAGIFPDLVSFSTLINACVAKRDLNGAFKLYHEMKSKNIQPNQIIYTTLINGCAKTKDFA 257
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A++ F M+ +E PD+ F+ MI ICS A +F EM E G E + + LTSL
Sbjct: 258 RAWKTFNFMR-TEISLPDAVAFNLMIHICSKTEDAERAIDLFKEMSERGLEISQYTLTSL 316
Query: 291 IQ-CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
IQ C + ++ L ++ G P R +L+
Sbjct: 317 IQACSSRHDYYNESFVLLEQMAASGFVPSIRTYNVILS 354
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 7/234 (2%)
Query: 91 KEKSYDT------RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
K+ +DT +N +I P FS LI Y +G + + + +MK G KP++
Sbjct: 108 KDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVF 167
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TYN++L M + + +Y +M +PN T+ LL + +D L ++ EM
Sbjct: 168 TYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEM 227
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+KG+ + +Y +L+ TD+ + MK S C PDS T ++++ G+
Sbjct: 228 TQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVS-GCCPDSITCNALLDGFCKLGQ 286
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EA A+ + G+ + +SLI +A+R D+V ++ + GI PD
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+T+N ++D + + I +E+ ++ + T++ L+ AY ++ E + + +
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
MK+ G + V YN++L + A ++ M N P+ TF ++ G
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL-NYNPNRATFVILLNGLCKNG 215
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
K +A MF+EM + G PN + T ++ +A+RTDDV R LN + G PD C
Sbjct: 216 KTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCN 275
Query: 324 CLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFK 369
LL+ + + +E L++ EK GYV+ + I+G F+
Sbjct: 276 ALLDGFCKLGQIDEAFALLQLFEKE----GYVLGIKGYSSLIDGLFR 318
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 128 LNVYE-EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
L ++E E +G+K Y++L+D + RAKR +V+ ++M G+ P+ Y L+R
Sbjct: 294 LQLFEKEGYVLGIK----GYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIR 349
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
+ + L++ +M ++G+ YN L+ DVG D+A + ++ S +C
Sbjct: 350 GFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI-SKNDCF 408
Query: 247 PDSWTFSSMITICS-CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
P S T++ I IC CR G + EA +FN+M G P++ +LI KA ++
Sbjct: 409 PTSCTYT--ILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEE-A 465
Query: 305 RALNRLPELGITP 317
R L E+G P
Sbjct: 466 RHLFYKMEIGKNP 478
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 14/248 (5%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+P+ ++ LI+ + G D LN+ +M G+ P+ YN L+
Sbjct: 334 KAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLD 393
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ +++ E++ N P TY L+ R ++ ++ +M+ G S+ +N L+
Sbjct: 394 KARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALI 453
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQ------------PDSWTFSSMITICSCRGKVSEA 268
G +EA +F M+ +N D+ + +M+ G + +A
Sbjct: 454 DGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKA 513
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+ ++ ++G P++ LI + KA+ + + L G +PD G L++
Sbjct: 514 YKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDG 573
Query: 329 MTQTPKEE 336
+ +EE
Sbjct: 574 FHRVDREE 581
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 18/235 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LIK + G D ++ E+ P TY L+ M R + + I+
Sbjct: 375 DTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIF 434
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL----------- 215
+M + G SP+ T+ +L+ +A E+ ++ +M E G S+ L
Sbjct: 435 NQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMD 493
Query: 216 ---YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAM 271
T++ + G +A+++ + S PD T++ +I C+ K ++ A +
Sbjct: 494 TASLQTMVERLCESGLILKAYKLLMQLADS-GVVPDIMTYNVLIN-GFCKAKNINGAFKL 551
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
F E+ G P+ +LI + + R +D R L+++ + G TP CL+
Sbjct: 552 FRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 606
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 117/280 (41%), Gaps = 11/280 (3%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + T+++ +G + ++ GV P+++TYN L++ +AK +
Sbjct: 492 MDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKL 551
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E+ G SP+ TY +L+ + R ED V +M + G S +Y L+
Sbjct: 552 FRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCR 611
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G AF ++ S Q D + + + E E +LE F+ N F
Sbjct: 612 KGKLSVAFSLWLKYLRSLPSQED-----ETLKLAEEHFEKGELEKAVRCLLEMNFKLNNF 666
Query: 286 VL---TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK--L 340
+ T + +A+R+++ ++ L E + + C L+N + + E+
Sbjct: 667 EIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIF 726
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSIS 380
+ +EK + + LL ++ D K A +L N ++
Sbjct: 727 LYTLEKGFMLMPRICNQLLRSLILQ-DKMKHALDLLNRMN 765
>gi|307110337|gb|EFN58573.1| hypothetical protein CHLNCDRAFT_140730 [Chlorella variabilis]
Length = 926
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 4/204 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ L+ L G+ G L VY M+ G P+++TYN L+ + +M
Sbjct: 374 AYNALLHLLGSIGQLQRSLGVYRGMRRRGPAPDVVTYNTLIAAAAHGGNVQAAMRTFSDM 433
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG-- 227
D + P T +LL Y +AR V+ M + G++ ++ +Y +L+ C G
Sbjct: 434 VDADIEPTERTAGALLHCYAKARDAASARRVFEGMAQLGVRPNLEIYTSLIDACVQAGGK 493
Query: 228 -YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+T AF++ E+M+ E P + T+ ++ C G V+ A A++ + + G P+ +
Sbjct: 494 QWTQFAFQLVEEMR-REGLAPSAVTYGCLLAACEKAGDVTRAFALYKQACDEGVAPSDQM 552
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
LI +A+R ++ V + RL
Sbjct: 553 HDMLISMCTEAERLEEAVDLVKRL 576
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI GN + + +M ++P T LL +A+ + ++
Sbjct: 406 DVVTYNTLIAAAAHGGNVQAAMRTFSDMVDADIEPTERTAGALLHCYAKARDAASARRVF 465
Query: 167 KEMTDNGLSPNWNTYASLLRA---YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M G+ PN Y SL+ A G ++ + + EM+ +G+ S Y LLA C
Sbjct: 466 EGMAQLGVRPNLEIYTSLIDACVQAGGKQWTQFAFQLVEEMRREGLAPSAVTYGCLLAAC 525
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
G AF +++ E P +I++C+ ++ EA
Sbjct: 526 EKAGDVTRAFALYKQ-ACDEGVAPSDQMHDMLISMCTEAERLEEA 569
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 127/349 (36%), Gaps = 62/349 (17%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-RPWQVKTIYKEMT--DNGLSPNW 178
G+ L ++EM+A GV PN + L A P Q+ ++ + + PN
Sbjct: 227 GDAAWLLRTWDEMEAAGVAPNNYVVSALFSAASHAPCTPAQLDRLFAALALLRSFGPPND 286
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA-------------- 224
Y SLL R E + V+ +K+ G++ + LY++L A CA
Sbjct: 287 TVYTSLLTLIQRQAIQERAVDVWTAVKQDGVRQTPHLYSSLFAACAPGASPALVEVALEA 346
Query: 225 -------------------------------------DVGYTDEAFEIFEDMKSSENCQP 247
+G + ++ M+ P
Sbjct: 347 ADAMQDSWQECVARSQPRPHYERDMLVAYNALLHLLGSIGQLQRSLGVYRGMRR-RGPAP 405
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T++++I + G V A F++M++A EP +L+ CY KA+ R
Sbjct: 406 DVVTYNTLIAAAAHGGNVQAAMRTFSDMVDADIEPTERTAGALLHCYAKARDAASARRVF 465
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPKEELG----KLVECVEKSNSKLGYVV-KLLLEEQ 362
+ +LG+ P+ L++ Q ++ +LVE + + V LL
Sbjct: 466 EGMAQLGVRPNLEIYTSLIDACVQAGGKQWTQFAFQLVEEMRREGLAPSAVTYGCLLAAC 525
Query: 363 DIEGDFKKEATELFNSISKDVKKA--YCNCLIDLCVNLNLLENACKLLE 409
+ GD + + + V + + LI +C LE A L++
Sbjct: 526 EKAGDVTRAFALYKQACDEGVAPSDQMHDMLISMCTEAERLEEAVDLVK 574
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-RPWQ--VKTIYKEM 169
L+ Y A + V+E M +GV+PN+ Y +L+D +A + W + +EM
Sbjct: 447 ALLHCYAKARDAASARRVFEGMAQLGVRPNLEIYTSLIDACVQAGGKQWTQFAFQLVEEM 506
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
GL+P+ TY LL A +A ++Y++ ++G+ S +++ L++MC +
Sbjct: 507 RREGLAPSAVTYGCLLAACEKAGDVTRAFALYKQACDEGVAPSDQMHDMLISMCTEAERL 566
Query: 230 DEAFEIFEDM-KSSENCQP 247
+EA ++ + + +SS QP
Sbjct: 567 EEAVDLVKRLARSSPGAQP 585
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-RPWQVKTIYKEMTDNGLSPNWNT 180
GN++ V M+ G++ ++ITYN+L+ A P V+T Y+E+ GL P T
Sbjct: 155 GNWEAAQEVVSIMEREGIQRDVITYNSLIKAAAAAGLLPHAVRT-YRELAAAGLRPTTFT 213
Query: 181 YASLLRAYGRARYGEDT--LSVYREMKEKGMQLSVTLYNTLLAMCADVGYT----DEAFE 234
YA+L A +AR+G+ L + EM+ G+ + + + L + + T D F
Sbjct: 214 YAALFTAAAKARHGDAAWLLRTWDEMEAAGVAPNNYVVSALFSAASHAPCTPAQLDRLFA 273
Query: 235 IFEDMKSSENCQPDSWTFSSMITI 258
++S P+ ++S++T+
Sbjct: 274 ALALLRSFGP--PNDTVYTSLLTL 295
>gi|168038568|ref|XP_001771772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676903|gb|EDQ63380.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 614
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 59/287 (20%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDG----------CLNVYEEMK 135
+K E +Y +A E + P+ ++ L+ L G + G L +Y+EM+
Sbjct: 232 AKRLEDAYRIKAEMEASGVKPDVVTYTALMALVVKTGPYRGRSSPAQRLEKALQLYQEMQ 291
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
++P+ ITYN L+ +AK P +V IY+ M G+ P+ T++ +L + +
Sbjct: 292 DRNIRPDSITYNTLMFAGAQAKVPEKVLEIYRTMVAAGVPPDQFTFSFILESAAAGGRLK 351
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD--EAFEIFEDMKSSENCQPDSWTFS 253
L V+ EM+ G+ +N L+ CA Y D +A+ +FE+MK+ E P++ T++
Sbjct: 352 VALEVFEEMRAAGVAPKTNTFNFLIEACASAPYPDAEKAWALFEEMKTIEGVVPNAQTYN 411
Query: 254 SMITICSCRG--------------------------------KVSEAEA------MFNEM 275
+IT SC+G S+ E M+ +M
Sbjct: 412 HLIT-ASCKGGDNARALKAYELMWNSGYQRAVTTATFNKLIQSASQTEGLESALKMYRKM 470
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN---RLPELGITPDD 319
L+AG++P+ ++L+ R DD+ +AL+ + LG+ P+
Sbjct: 471 LDAGYKPDAITYSTLVVA---CNRADDLEQALSISQEMEGLGVKPNQ 514
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 6/211 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT-- 164
D FS +++ G L V+EEM+A GV P T+N L++ A P K
Sbjct: 333 DQFTFSFILESAAAGGRLKVALEVFEEMRAAGVAPKTNTFNFLIEACASAPYPDAEKAWA 392
Query: 165 IYKEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL--YNTLLA 221
+++EM T G+ PN TY L+ A + L Y M G Q +VT +N L+
Sbjct: 393 LFEEMKTIEGVVPNAQTYNHLITASCKGGDNARALKAYELMWNSGYQRAVTTATFNKLIQ 452
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ + A +++ M + +PD+ T+S+++ C+ + +A ++ EM G +
Sbjct: 453 SASQTEGLESALKMYRKMLDA-GYKPDAITYSTLVVACNRADDLEQALSISQEMEGLGVK 511
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
PN V SLI YG+A + +D V L E
Sbjct: 512 PNQVVQHSLIAAYGQAGQWEDAVATFRVLQE 542
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 26/243 (10%)
Query: 78 IW-VNPKSPRASKLKE--------KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCL 128
IW +N R S L E K+ A NE + LI + D L
Sbjct: 151 IWRINRSISRCSSLSEALEVVNEMKAAGVNAANE------GTYLALITVCRRQQEGDRAL 204
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++YE MK GV P+++TYN L+ +AKR I EM +G+ P+ TY +L+
Sbjct: 205 SIYEAMKDAGVIPSVLTYNTLISCCQQAKRLEDAYRIKAEMEASGVKPDVVTYTALMALV 264
Query: 189 -------GR---ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
GR A+ E L +Y+EM+++ ++ YNTL+ A ++ EI+
Sbjct: 265 VKTGPYRGRSSPAQRLEKALQLYQEMQDRNIRPDSITYNTLMFAGAQAKVPEKVLEIYRT 324
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
M ++ PD +TFS ++ + G++ A +F EM AG P LI+ A
Sbjct: 325 MVAA-GVPPDQFTFSFILESAAAGGRLKVALEVFEEMRAAGVAPKTNTFNFLIEACASAP 383
Query: 299 RTD 301
D
Sbjct: 384 YPD 386
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 165 IYKEMTDNGL-SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM G+ + N TY +L+ R + G+ LS+Y MK+ G+ SV YNTL++ C
Sbjct: 170 VVNEMKAAGVNAANEGTYLALITVCRRQQEGDRALSIYEAMKDAGVIPSVLTYNTLISCC 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC----SCRGKVSEAE------AMFN 273
++A+ I +M++S +PD T+++++ + RG+ S A+ ++
Sbjct: 230 QQAKRLEDAYRIKAEMEAS-GVKPDVVTYTALMALVVKTGPYRGRSSPAQRLEKALQLYQ 288
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
EM + P+ +L+ +A+ + V+ + G+ PD
Sbjct: 289 EMQDRNIRPDSITYNTLMFAGAQAKVPEKVLEIYRTMVAAGVPPDQ 334
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ LI+ + L +Y +M G KP+ ITY+ L+ RA Q +I +EM
Sbjct: 447 FNKLIQSASQTEGLESALKMYRKMLDAGYKPDAITYSTLVVACNRADDLEQALSISQEME 506
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
G+ PN SL+ AYG+A ED ++ +R ++E QL+ Y+ + C G
Sbjct: 507 GLGVKPNQVVQHSLIAAYGQAGQWEDAVATFRVLQEGEEQLTSVSYSIIFDACFGKG 563
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT--YNNLLDTMGRAKRPWQ 161
+ PNA ++ LI G+ L YE M G + + T +N L+ + + +
Sbjct: 403 VVPNAQTYNHLITASCKGGDNARALKAYELMWNSGYQRAVTTATFNKLIQSASQTEGLES 462
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+Y++M D G P+ TY++L+ A RA E LS+ +EM+ G++ + + ++L+A
Sbjct: 463 ALKMYRKMLDAGYKPDAITYSTLVVACNRADDLEQALSISQEMEGLGVKPNQVVQHSLIA 522
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG------------------ 263
G ++A F ++ E Q S ++S + C +G
Sbjct: 523 AYGQAGQWEDAVATFRVLQEGEE-QLTSVSYSIIFDACFGKGGAEAVLKRTKPGKLEIHP 581
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLT 288
V A ++NE E GF L LT
Sbjct: 582 GVEAAIGLYNEASEFGFSQILHKLT 606
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+Q ++ N ++ C+ + EA E+ +MK++ + T+ ++IT+C + + A
Sbjct: 147 LQQTIWRINRSISRCSSL---SEALEVVNEMKAAGVNAANEGTYLALITVCRRQQEGDRA 203
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+++ M +AG P++ +LI C +A+R +D R + G+ PD L+ +
Sbjct: 204 LSIYEAMKDAGVIPSVLTYNTLISCCQQAKRLEDAYRIKAEMEASGVKPDVVTYTALMAL 263
Query: 329 MTQT 332
+ +T
Sbjct: 264 VVKT 267
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I +G D + ++ M + G++P+ +T+N L+D + R + ++
Sbjct: 445 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 504
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M G P TY ++ +YG +D + +MK +G+ +V + TL+ +
Sbjct: 505 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 564
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A E E+MKS +P S ++++I + RG +A F M G +P+L
Sbjct: 565 GRFNDAIECLEEMKSV-GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 623
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L SLI +G+ +R + L + E G+ PD L+ + + K
Sbjct: 624 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 671
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 129/286 (45%), Gaps = 12/286 (4%)
Query: 70 TGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWR---IDPN--AFSTLIKLYGTAGNF 124
TG S K+ V+ S A+ ++ + A E+ R I P A++ L+K Y G
Sbjct: 300 TGLSAKTATLVSIISALANS--GRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPL 357
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+ EM+ GV P+ TY+ L+D A R + + KEM + PN ++ L
Sbjct: 358 KDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRL 417
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
L Y + T V +EMK G++ YN ++ D A F+ M SE
Sbjct: 418 LAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML-SEG 476
Query: 245 CQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+PD T++++I C C+ G+ AE MF M G P +I YG +R DD+
Sbjct: 477 IEPDRVTWNTLID-CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 535
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
R L ++ GI P+ L++V ++ + +EC+E+ S
Sbjct: 536 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGR--FNDAIECLEEMKS 579
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 5/227 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT-- 164
D + +S LI Y AG ++ V +EM+ V+PN ++ LL R + WQ KT
Sbjct: 375 DEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGY-RDRGEWQ-KTFQ 432
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ KEM G+ P+ Y ++ +G+ + ++ + M +G++ +NTL+
Sbjct: 433 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 492
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G A E+FE M+ C P + T++ MI + + + + + +M G PN+
Sbjct: 493 KHGRHIVAEEMFEAME-RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 551
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YGK+ R +D + L + +G+ P L+N Q
Sbjct: 552 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ 598
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN + TL+ +YG +G F+ + EEMK++G+KP+ YN L++ + Q
Sbjct: 547 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 606
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ MT +GL P+ SL+ A+G R + +V + MKE G++ V Y TL+
Sbjct: 607 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 666
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPD 248
V + ++E+M S C+PD
Sbjct: 667 IRVDKFQKVPGVYEEMIMS-GCKPD 690
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 4/238 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E D ++TLI + G ++E M+ G P TYN ++++ G +
Sbjct: 471 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 530
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R +K + +M G+ PN T+ +L+ YG++ D + EMK G++ S T+YN
Sbjct: 531 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 590
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G +++A F M +S+ +P +S+I + +EA A+ M E
Sbjct: 591 ALINAYAQRGLSEQAVNAFRVM-TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 649
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL---LNVMTQT 332
G +P++ T+L++ + + V + G PD + L L M QT
Sbjct: 650 NGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKPDRKARSMLRSALRYMKQT 707
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 9/235 (3%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN+F S L+ Y G + V +EMK+IGVKP+ YN ++DT G+
Sbjct: 407 VQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 466
Query: 164 TIYKEMTDNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
T + M G+ P+ WNT +GR E+ ++ M+ +G T YN ++
Sbjct: 467 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE---MFEAMERRGCLPCATTYNIMI 523
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
D D+ + MKS + P+ T ++++ + G+ ++A EM G
Sbjct: 524 NSYGDQERWDDMKRLLGKMKS-QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 582
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
+P+ + +LI Y + ++ V A + G+ P L+N + ++
Sbjct: 583 KPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 637
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 94 SYDTRARNEKWR-IDPNAFSTLIKLYGTA-------GNFDGCLNVYEEMKAIGVKPNMIT 145
S D+R+ +E W + + ++ + Y A G D L+V++EMK G+ P +
Sbjct: 324 SGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYS 383
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN+L+ +A R + ++ M +G +PN T+ + +G++ L Y MK
Sbjct: 384 YNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK 443
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
KG+ V N +L A G A +F ++K+ PD+ T++ MI CS
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAM-GISPDNITYTMMIKCCSKASNA 502
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
EA +F EM+E P++ + SLI KA R ++ + L E+ + P D C
Sbjct: 503 DEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD----CT 558
Query: 326 LNVMTQTPKEELGKLVECVE 345
N + E GK+ E ++
Sbjct: 559 YNTLLAGLGRE-GKVKEVMQ 577
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+E + P + L+ GN + +++EM G +PN YN LL+ A
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+V +++ M + G++P+ +Y ++ D LS ++++ + G++ + YN L+
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +EA ++ DM+ + P+ +T++S+I GK +EA M+ E+L G+
Sbjct: 984 HGLGKSGRLEEALSLYNDMEK-KGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGW 1042
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+PN+F +LI+ Y + ++ A R+ G P+
Sbjct: 1043 KPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPN 1080
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 107 DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ F+ ++ G + + L + EEM G K +TYN ++ + ++K +
Sbjct: 798 DPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAIN 857
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y ++ G SP TY LL + ED +++ EM E G + + +YN LL
Sbjct: 858 LYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYR 917
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G T++ E+FE M + PD +++ +I G++++ + F ++ + G EP+L
Sbjct: 918 IAGDTEKVCELFESM-VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 976
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI GK+ R ++ + N + + GI P+
Sbjct: 977 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPN 1010
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI +G ++VY+ M A GV P + TY+ L+ G+ + V + EM
Sbjct: 174 YNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEME 233
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN +Y +R G+A E+ + R+M+E+G + V L+ + D G
Sbjct: 234 ARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLA 293
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A ++F MK+S+ +PD T+ +++ C G ++N + G+ N+ T+
Sbjct: 294 DAKDVFWKMKASDQ-KPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAA 352
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
+ + R D+ + + + + GI P
Sbjct: 353 VDALCQVGRVDEALDVFDEMKQKGIIP 379
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 108 PNAFSTL--IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ + I +G +G L YE MK+ G+ P+++ N +L + + R K +
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ G+SP+ TY +++ +A ++ + ++ EM E V N+L+ M
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA++IF ++K N +P T+++++ GKV E + M F PN+
Sbjct: 534 AGRGNEAWKIFYELKEM-NLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNII 592
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ C K + + L + G PD
Sbjct: 593 TYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F T+ G G MK G+ N TYN L+ + ++ + +YK M
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA 198
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P TY+ L+ A+G+ R E + + EM+ +G++ +V Y + + G +
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+ I M+ E C+PD T + +I I G++++A+ +F +M + +P+ +L
Sbjct: 259 EAYRILRKME-EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITL 317
Query: 291 IQCYGKAQRTDDVVRALNRL 310
+ G + + V N L
Sbjct: 318 LDKCGDSGDSRSVSEIWNAL 337
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S I++ G AG + + +M+ G KP+++T L+ + A R
Sbjct: 233 EARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRL 292
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M + P+ TY +LL G + ++ +K G +V Y
Sbjct: 293 ADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAA 352
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ VG DEA ++F++MK + P ++++S+I+ + + A +FN M G
Sbjct: 353 VDALCQVGRVDEALDVFDEMK-QKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
PN + I +GK+ + ++ + GI PD +L + +T + + K
Sbjct: 412 PTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAK 471
Query: 340 LV 341
V
Sbjct: 472 RV 473
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI G +G + L++Y +M+ G+ PN+ TYN+L+ +G+A + + +Y+E+
Sbjct: 979 YNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELL 1038
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
G PN TY +L+R Y + E+ + Y M G + + + Y L
Sbjct: 1039 AKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +IK A N D + ++ EM P+++ N+L+D + +A R + I+
Sbjct: 485 DNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIF 544
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ + L P TY +LL GR ++ + + M ++ YNT+L
Sbjct: 545 YELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKN 604
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A ++ M + C PD ++++++ ++ EA MF +M + P+
Sbjct: 605 GEVNYALDMLYSM-TMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYAT 662
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ +++ + R+ + AL+ + E + PD +
Sbjct: 663 VCTILPSF---VRSGLMKEALHTVREYILQPDSK 693
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 19/224 (8%)
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G+ L YN L+ D D A E+F +MK C PD +T+ ++ ++ +
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL-GCDPDEFTYHLILDAMGKSMRIED 819
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ EM G++ ++I K++ D+ + +L G +P G LL+
Sbjct: 820 MLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLD 879
Query: 328 VMTQTPKEE-----LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK- 381
+ + E +++EC + N + +LL I GD +K ELF S+ +
Sbjct: 880 GLLKDGNIEDAEALFDEMLECGCEPNCA---IYNILLNGYRIAGDTEK-VCELFESMVEQ 935
Query: 382 ----DVKKAYCNCLIDLCVNLNL---LENACKLLELGLTLEVYT 418
D+ K+Y + LC + L L +L ++GL ++ T
Sbjct: 936 GMNPDI-KSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLIT 978
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I +G D + ++ M + G++P+ +T+N L+D + R + ++
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M G P TY ++ +YG +D + +MK +G+ +V + TL+ +
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A E E+MKS +P S ++++I + RG +A F M G +P+L
Sbjct: 563 GRFNDAIECLEEMKSV-GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L SLI +G+ +R + L + E G+ PD L+ + + K
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 136/305 (44%), Gaps = 13/305 (4%)
Query: 51 TQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWR---ID 107
+S +P+K Q TG S K+ V+ S A ++ + A E+ R I
Sbjct: 280 AKSGDPSKALQLLGMAQA-TGLSAKTATLVSIISALADS--GRTLEAEALFEELRQSGIK 336
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P A++ L+K Y G ++ EM+ GV P+ TY+ L+D A R + +
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM + PN ++ LL + + T V +EMK G++ YN ++
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNL 284
D A F+ M SE +PD T++++I C C+ G+ AE MF M G P
Sbjct: 457 FNCLDHAMTTFDRM-LSEGIEPDRVTWNTLID-CHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+I YG +R DD+ R L ++ GI P+ L++V ++ + +EC+
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR--FNDAIECL 572
Query: 345 EKSNS 349
E+ S
Sbjct: 573 EEMKS 577
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 5/227 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT-- 164
D + +S LI Y AG ++ V +EM+A V+PN ++ LL R + WQ KT
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF-RDRGEWQ-KTFQ 430
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ KEM G+ P+ Y ++ +G+ + ++ + M +G++ +NTL+
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G A E+FE M+ C P + T++ MI + + + + + +M G PN+
Sbjct: 491 KHGRHIVAEEMFEAME-RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YGK+ R +D + L + +G+ P L+N Q
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ 596
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN + TL+ +YG +G F+ + EEMK++G+KP+ YN L++ + Q
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 604
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ MT +GL P+ SL+ A+G R + +V + MKE G++ V Y TL+
Sbjct: 605 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPD 248
V + ++E+M S C+PD
Sbjct: 665 IRVDKFQKVPVVYEEMIMS-GCKPD 688
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P+ ++TLI + G ++E M+ G P TYN ++++ G +R +K
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +M G+ PN T+ +L+ YG++ D + EMK G++ S T+YN L+
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A G +++A F M +S+ +P +S+I + +EA A+ M E G +P+
Sbjct: 595 AQRGLSEQAVNAFRVM-TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 653
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL---LNVMTQT 332
+ T+L++ + + V + G PD + L L M QT
Sbjct: 654 VVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQT 705
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 9/239 (3%)
Query: 102 EKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN+F S L+ + G + V +EMK+IGVKP+ YN ++DT G+
Sbjct: 401 EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCL 460
Query: 160 WQVKTIYKEMTDNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
T + M G+ P+ WNT +GR E+ ++ M+ +G T Y
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE---MFEAMERRGCLPCATTY 517
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N ++ D D+ + MKS + P+ T ++++ + G+ ++A EM
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKS-QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
G +P+ + +LI Y + ++ V A + G+ P L+N + ++
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 635
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 119/267 (44%), Gaps = 7/267 (2%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT--LSVY 201
+TYN L+ R + + +M +G ++ Y+ ++++ R+ + L +Y
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+E++ ++L V L N ++ A G +A ++ M + + T S+I+ +
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLL-GMAQATGLSAKTATLVSIISALAD 316
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ EAEA+F E+ ++G +P +L++ Y K D ++ + + G++PD+
Sbjct: 317 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 322 CGCLLNVMTQTPKEELGKLV--ECVEKSNSKLGYVVKLLLEEQDIEGDFKK--EATELFN 377
L++ + E ++V E +V LL G+++K + +
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 378 SISKDVKKAYCNCLIDLCVNLNLLENA 404
SI + + N +ID N L++A
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHA 463
>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rubella]
Length = 440
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+P+ +F+TL+++YG A F ++++ M+ ++ ++TYN+++ G+
Sbjct: 183 KMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEHE 242
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 302
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 303 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 357
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV +++ LG PD +LN
Sbjct: 358 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLN 404
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 49 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 108
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 109 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 168
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ SV +NTLL + D EA +F M+ +N + T
Sbjct: 169 SMAKEADKLFWGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQTVVT 227
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SMI I + +A + EM G EPN +++I +GK + D +L
Sbjct: 228 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 287
Query: 312 ELGITPD 318
G+ D
Sbjct: 288 SSGVEID 294
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 14 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 73
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 74 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN 133
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + EA+ +F M + G EP++
Sbjct: 134 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLSMAKEADKLFWGMRKMGIEPSVVS 192
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 193 FNTLLRVYGDAE 204
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ +
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 62 KLCDYSKAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 167
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 58/129 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 312 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLL 371
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ N A +L AYG+ + + VY EM+E G S
Sbjct: 372 SKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 431
Query: 214 TLYNTLLAM 222
++ +L++
Sbjct: 432 EVHFQMLSL 440
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 3/218 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EK + P+ A++ LI+ + G+ + +MK GV P++ TYN L+ GR
Sbjct: 789 EKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEF 848
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + KEM DNG PN +Y +L+ + + V R+M+++G+ +V +YN L
Sbjct: 849 DKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNML 908
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ C G ++AF E+M + + + T++++I S GK++EAE M E+ G
Sbjct: 909 IDGCCSKGKIEDAFRFSEEM-FKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG 967
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+P++F SLI Y A + + GI P
Sbjct: 968 LKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP 1005
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 3/208 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y GN + V E MKA ++P++IT+N LL + +A + + EM
Sbjct: 625 YNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMK 684
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT 229
D G P+ T++ L Y + L VY + G++++ + LL A+C + G
Sbjct: 685 DQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKE-GQI 743
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
++A EI + ++ P+ +++MI S +G + A + M + G +P+
Sbjct: 744 EKAEEIL-GREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNC 802
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITP 317
LI+ + + ++ + +N++ G++P
Sbjct: 803 LIRTFCELGDMENAEQEVNKMKLKGVSP 830
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+ SKL E R ++ + PN ++ LI + G + EEM G++ N+
Sbjct: 879 KGSKLLEAQIVKRDMEDRG-VSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNL 937
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TYN L+D + + + + + E++ GL P+ TY SL+ Y A + +++Y E
Sbjct: 938 VTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
MK G++ ++ Y+ L+++C T E E+ + + + QPD ++ ++ + G
Sbjct: 998 MKTSGIKPTLKTYHLLISLC-----TKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHG 1052
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
+ +A + +M+E + SLI
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDKTTYNSLI 1080
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 105/239 (43%), Gaps = 16/239 (6%)
Query: 96 DTRARNEKWRIDPNAFSTLIK--------LYGTA-------GNFDGCLNVYEEMKAIGVK 140
D + +++R+ N F +++ +YG A + L ++ MK +
Sbjct: 525 DHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIS 584
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P + YN L+D + + ++ + ++ EM L P+ TY +L+ Y + E + V
Sbjct: 585 PTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKV 644
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
MK ++ S+ +NTLL G ++A + +MK + PD++TFS + S
Sbjct: 645 RERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMK-DQGFVPDAFTFSILFDGYS 703
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
K A ++ +++G + N + + L+ K + + L R G+ P++
Sbjct: 704 SNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNE 762
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 135/314 (42%), Gaps = 15/314 (4%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RNE ++ + L+ F +NV+ + +P+ Y + +
Sbjct: 509 RNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDV 568
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ M + +SP Y L+ + R +D ++ EM + + S+ YNTL
Sbjct: 569 GKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTL 628
Query: 220 L-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ C D G +++F++ E MK ++N +P TF++++ G V +AE + EM +
Sbjct: 629 IDGYCKD-GNPEKSFKVRERMK-ADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQ 686
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
GF P+ F + L Y + D + + G+ + C LLN + + + E
Sbjct: 687 GFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIE-- 744
Query: 339 KLVECVEKSNSKLGYVVKLLLEEQDIEGDFKK----EATELFNSISKDVKK----AYCNC 390
K E + + +K G V +L I+G +K A +++ K K AY NC
Sbjct: 745 KAEEILGREMAK-GLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAY-NC 802
Query: 391 LIDLCVNLNLLENA 404
LI L +ENA
Sbjct: 803 LIRTFCELGDMENA 816
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ F+ +LI Y AGN C+ +YEEMK G+KP + TY+ LL ++ + K
Sbjct: 968 LKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH-LLISLCTKEGIELTK 1026
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I+ EM+ L P+ Y +L Y + ++ ++M EK + L T YN+L+
Sbjct: 1027 KIFGEMS---LQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQ 1083
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEP 282
VG E + ++MK+ E +P++ T+ +I C K A + EM E G
Sbjct: 1084 LKVGKLCEVRSLIDEMKARE-MEPEADTY-DIIVKGHCEMKDYMGAYVWYREMQEKGLLL 1141
Query: 283 NLFV---LTSLIQCYGKAQRTDDVVRALN 308
++ + L S ++ +++ ++V+ +N
Sbjct: 1142 DVCIGDELVSGLKEEWRSKEAENVISEMN 1170
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 40/256 (15%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYE------------------------ 132
T +++ + D FS L Y + D L VYE
Sbjct: 681 TEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKE 740
Query: 133 ------------EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
EM A G+ PN + YN ++D R + M G+ P+
Sbjct: 741 GQIEKAEEILGREM-AKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLA 799
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y L+R + E+ +MK KG+ SV YN L+ D+ F++ ++M+
Sbjct: 800 YNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEME 859
Query: 241 SSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ P+ ++ ++I C C+G K+ EA+ + +M + G PN+ + LI +
Sbjct: 860 DN-GTMPNVVSYGTLIN-CLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGK 917
Query: 300 TDDVVRALNRLPELGI 315
+D R + + GI
Sbjct: 918 IEDAFRFSEEMFKKGI 933
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 148/323 (45%), Gaps = 16/323 (4%)
Query: 96 DTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
D RN + PN F TLIK Y ++ + + + M A GV P++ YN L+ +
Sbjct: 475 DQMIRN---GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
RAK+ + K + +M + G+ PN +TY + + Y ++ + +++M G+ +
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+Y L+ DVG T EA F+ M + PD +S++I S GK EA +F
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCM-LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
+ L+ G P++F+ SLI + K + + + + GI P+ L+N + +
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLG 710
Query: 334 KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKK----EATELFNS-ISKDVK-KAY 387
E+ K E ++ K V ++ I+G K EA +LF+ ISK + Y
Sbjct: 711 --EVTKARELFDEIEEK-DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767
Query: 388 CNC-LIDLCVNLNLLENACKLLE 409
C LID C LE A L
Sbjct: 768 IYCILIDGCGKEGNLEKALSLFH 790
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 40/272 (14%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ I G D L V + M G+ P+ TY L+D + KR + K I
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M +GL+PN TY +L+ + + E+ L + EM +G++L+V YN ++ A
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSW----------------------------------- 250
G +A +F +M + +PD+W
Sbjct: 394 AGEMAKAMSLFNEMLMA-GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+S +I+ + +A + ++M+ G +PN+F+ +LI+ Y + R + + L +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 311 PELGITPDDRFC-GCLLNVMTQTPKEELGKLV 341
G+ P D FC CL+ + + K E K++
Sbjct: 513 IANGVLP-DLFCYNCLIIGLCRAKKVEEAKML 543
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Query: 103 KWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + P+ F ++LI + G+ + +Y+EM G+ PN++ YN L++ + +
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + ++ E+ + L P+ TY++++ Y ++ + ++ EM KG+ +Y L+
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
C G ++A +F + + + F+S+I GKV EA +F++M++
Sbjct: 774 DGCGKEGNLEKALSLFHE--AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKL 831
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ T LI YGKA+ ++ + + I P+
Sbjct: 832 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 869
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEE--MKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
D + LI G GN + L+++ E K++G ++ +N+L+D+ + + + +
Sbjct: 765 DGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG---SLSAFNSLIDSFCKHGKVIEARE 821
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M D L+PN TY L+ AYG+A E+ ++ +M+ + + + Y +LL
Sbjct: 822 LFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYN 881
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G + +F+DM+ + D+ + M + GK EA + N+ L G +
Sbjct: 882 QIGNRFKMISLFKDME-ARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED 940
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
V +LI K ++ V+ L+ + + ++ + C LL
Sbjct: 941 DVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 982
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F I + G + +V+ + G P +I NNL+ + +A +Y M
Sbjct: 174 VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSM 233
Query: 170 TDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + P+ TY ++++A+ G G+ LS EM EK + ++ YN +
Sbjct: 234 VEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLS---EM-EKECKPNLFTYNAFIGGLCQT 289
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA E+ + + + PD T++ ++ + + EA+ +F M +G PN F
Sbjct: 290 GAVDEALEV-KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGI 315
T+LI + K ++ +R + + G+
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGL 377
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+AF++LI + G ++++M + PN++TY L+D G+A+ + + ++ +
Sbjct: 801 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 860
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + PN TY SLL +Y + +S++++M+ +G+ Y + + G
Sbjct: 861 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 920
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ EA ++ + E + + F ++I ++S + +EM + +
Sbjct: 921 SLEALKLL-NKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 979
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
+L+ + K+ D+ + L + LG P
Sbjct: 980 TLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 113/229 (49%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+Y T RI PN +S++I D + V++ M GV PN TY +L
Sbjct: 215 DKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSL 274
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ + + + ++M NG+ PN TY+S + + + ++ M ++G+
Sbjct: 275 VHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGL 334
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +T Y++LL A G E +F+ M S+ QPD + F+++I + +GKV EA
Sbjct: 335 KPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSD-MQPDHYVFNTLIYASAKQGKVDEAM 393
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F++M + G +PN ++LI Y K R ++ + + G++P+
Sbjct: 394 LVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPN 442
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ST+I G+ D Y EM + PN++ Y++++ + + + + +
Sbjct: 196 PNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEV 255
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M NG++PN TY SL+ + + + + +M G++ +V Y++ +
Sbjct: 256 HDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCK 315
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA +IF+ M +PD T+SS++ + G + E +F+ M+++ +P+ +
Sbjct: 316 NGRCTEARKIFDSM-VKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHY 374
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V +LI K + D+ + +++ + G+ P+
Sbjct: 375 VFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPN 407
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G PN+++Y+ ++D + + P + Y+EM D + PN Y+S++ A + + +
Sbjct: 193 GCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKA 252
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ V+ M + G+ + Y +L+ G EA + E M S +P+ T+SS +
Sbjct: 253 MEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKM-CSNGVEPNVVTYSSFMD 311
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
G+ +EA +F+ M++ G +P++ +SL+ Y
Sbjct: 312 YLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGY 348
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI G D + V+ +M+ G+KPN +TY+ L++ + R ++
Sbjct: 372 DHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALF 431
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR 190
+EM NG+SPN+ TY +L+ R
Sbjct: 432 QEMVSNGVSPNFITYNIMLQGLFR 455
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 43/239 (17%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG---LSPN 177
+G + L+V++E+ G+ + + N L + R P + + M G ++P
Sbjct: 31 SGGAEDALDVFDELLRRGIGAPIRSLNGALADVAR-DNPAAAVSRFNRMARAGASMVTPT 89
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIF 236
+TY L+ A + + + +KG ++ ++N LL +CAD TD+A +I
Sbjct: 90 VHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCAD-KRTDDAMDIV 148
Query: 237 ------------------------EDMKSSE-------------NCQPDSWTFSSMITIC 259
+ +S E C P+ ++S++I
Sbjct: 149 LRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGL 208
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +A A + EML+ PN+ + +S+I K Q D + +R+ + G+TP+
Sbjct: 209 LKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPN 267
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 7/234 (2%)
Query: 91 KEKSYDT------RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
K+ +DT +N +I P FS LI Y +G + + + +MK G KP++
Sbjct: 108 KDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVF 167
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TYN++L M + + +Y +M +PN T+ LL + +D L ++ EM
Sbjct: 168 TYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEM 227
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+KG+ + +Y +L+ TD+ + MK S C PDS T ++++ G+
Sbjct: 228 TQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVS-GCCPDSITCNALLDGFCKLGQ 286
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EA A+ + G+ + +SLI +A+R D+V ++ + GI PD
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+T+N ++D + + I +E+ ++ + T++ L+ AY ++ E + + +
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
MK+ G + V YN++L + A ++ M N P+ TF ++ G
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL-NYNPNRATFVILLNGLCKNG 215
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
K +A MF+EM + G PN + T ++ +A+RTDDV R LN + G PD C
Sbjct: 216 KTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCN 275
Query: 324 CLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFK 369
LL+ + + +E L++ EK GYV+ + I+G F+
Sbjct: 276 ALLDGFCKLGQIDEAFALLQLFEKE----GYVLGIKGYSSLIDGLFR 318
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 128 LNVYE-EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
L ++E E +G+K Y++L+D + RAKR +V+ ++M G+ P+ Y L+R
Sbjct: 294 LQLFEKEGYVLGIK----GYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIR 349
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
+ + L++ +M ++G+ YN L+ DVG D+A + ++ S +C
Sbjct: 350 GFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI-SKNDCF 408
Query: 247 PDSWTFSSMITICS-CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
P S T++ I IC CR G + EA +FN+M G P++ +LI KA ++
Sbjct: 409 PTSCTYT--ILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEE-A 465
Query: 305 RALNRLPELGITP 317
R L E+G P
Sbjct: 466 RHLFYKMEIGKNP 478
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P+ ++ LI+ + G D LN+ +M G+ P+ YN L+ + +
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ E++ N P TY L+ R ++ ++ +M+ G S+ +N L+
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456
Query: 224 ADVGYTDEAFEIFEDMKSSEN 244
G +EA +F M+ +N
Sbjct: 457 CKAGELEEARHLFYKMEIGKN 477
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LIK + G D ++ E+ P TY L+ M R + + I+
Sbjct: 375 DTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIF 434
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD- 225
+M + G SP+ T+ +L+ +A E+ ++ +M E G S+ L L+ AD
Sbjct: 435 NQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLR---LSQGADR 490
Query: 226 ----------VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
V ++AF + + M + C P S + ++T +GK+S A +++ +
Sbjct: 491 VMDTANGFHRVDREEDAFRVLDQMVKN-GCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKY 549
Query: 276 LEA 278
L +
Sbjct: 550 LRS 552
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 94 SYDTRARNEKWR-IDPNAFSTLIKLYGTA-------GNFDGCLNVYEEMKAIGVKPNMIT 145
S D+R+ +E W + + ++ + Y A G D L+V++EMK G+ P +
Sbjct: 324 SGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYS 383
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN+L+ +A R + ++ M +G +PN T+ + +G++ L Y MK
Sbjct: 384 YNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK 443
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
KG+ V N +L A G A +F ++K+ PD+ T++ MI CS
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAM-GISPDNITYTMMIKCCSKASNA 502
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
EA +F EM+E P++ + SLI KA R ++ + L E+ + P D C
Sbjct: 503 DEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD----CT 558
Query: 326 LNVMTQTPKEELGKLVECVE 345
N + E GK+ E ++
Sbjct: 559 YNTLLAGLGRE-GKVKEVMQ 577
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+E + P + L+ GN + +++EM G +PN YN LL+ A
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+V +++ M + G++P+ +Y ++ D LS ++++ + G++ + YN L+
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +EA ++ DM+ + P+ +T++S+I GK +EA M+ E+L G+
Sbjct: 984 HGLGKSGRLEEALSLYNDMEK-KGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGW 1042
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+PN+F +LI+ Y + ++ A R+ G P+
Sbjct: 1043 KPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPN 1080
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 107 DPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP+ F+ ++ G + + L + EEM G K +TYN ++ + ++K +
Sbjct: 798 DPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAIN 857
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y ++ G SP TY LL + ED +++ EM E G + + +YN LL
Sbjct: 858 LYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYR 917
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G T++ E+FE M + PD +++ +I G++++ + F ++ + G EP+L
Sbjct: 918 IAGDTEKVCELFESM-VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDL 976
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI GK+ R ++ + N + + GI P+
Sbjct: 977 ITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPN 1010
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI +G ++VY+ M A GV P + TY+ L+ G+ + V + EM
Sbjct: 174 YNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEME 233
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN +Y +R G+A E+ + R+M+E+G + V L+ + D G
Sbjct: 234 ARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLA 293
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A ++F MK+S+ +PD T+ +++ C G ++N + G+ N+ T+
Sbjct: 294 DAKDVFWKMKASDQ-KPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAA 352
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
+ + R D+ + + + + GI P
Sbjct: 353 VDALCQVGRVDEALDVFDEMKQKGIIP 379
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 108 PNAFSTL--IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ + I +G +G L YE MK+ G+ P+++ N +L + + R K +
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ E+ G+SP+ TY +++ +A ++ + ++ EM E V N+L+ M
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA++IF ++K N +P T+++++ GKV E + M F PN+
Sbjct: 534 AGRGNEAWKIFYELKEM-NLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNII 592
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ C K + + L + G PD
Sbjct: 593 TYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD 625
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F T+ G G MK G+ N TYN L+ + ++ + +YK M
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA 198
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P TY+ L+ A+G+ R E + + EM+ +G++ +V Y + + G +
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+ I M+ E C+PD T + +I I G++++A+ +F +M + +P+ +L
Sbjct: 259 EAYRILRKME-EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITL 317
Query: 291 IQCYGKAQRTDDVVRALNRL 310
+ G + + V N L
Sbjct: 318 LDKCGDSGDSRSVSEIWNAL 337
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN +S I++ G AG + + +M+ G KP+++T L+ + A R
Sbjct: 233 EARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRL 292
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
K ++ +M + P+ TY +LL G + ++ +K G +V Y
Sbjct: 293 ADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAA 352
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ VG DEA ++F++MK + P ++++S+I+ + + A +FN M G
Sbjct: 353 VDALCQVGRVDEALDVFDEMK-QKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
PN + I +GK+ + ++ + GI PD +L + +T + + K
Sbjct: 412 PTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAK 471
Query: 340 LV 341
V
Sbjct: 472 RV 473
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 5/214 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +IK A N D + ++ EM P+++ N+L+D + +A R + I+
Sbjct: 485 DNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIF 544
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E+ + L P TY +LL GR ++ + + M ++ YNT+L
Sbjct: 545 YELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKN 604
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A ++ M + C PD ++++++ G++ EA MF +M + P+
Sbjct: 605 GEVNYALDMLYSM-TMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYAT 662
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ +++ + R+ + AL+ + E + PD +
Sbjct: 663 VCTILPSF---VRSGLMKEALHTVREYILQPDSK 693
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI G +G + L++Y +M+ G+ PN+ TYN+L+ +G+A + + +Y+E+
Sbjct: 979 YNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELL 1038
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
G PN TY +L+R Y + E+ + Y M G + + + Y L
Sbjct: 1039 AKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 19/248 (7%)
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
++R + + + + ++ + G+ L YN L+ D D A E+F +MK
Sbjct: 737 IIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL- 795
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
C PD +T+ ++ ++ + + EM G++ ++I K++ D+
Sbjct: 796 GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 855
Query: 304 VRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LGKLVECVEKSNSKLGYVVKLL 358
+ +L G +P G LL+ + + E +++EC + N + +L
Sbjct: 856 INLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCA---IYNIL 912
Query: 359 LEEQDIEGDFKKEATELFNSISK-----DVKKAYCNCLIDLCVNLNL---LENACKLLEL 410
L I GD +K ELF S+ + D+ K+Y + LC + L L +L ++
Sbjct: 913 LNGYRIAGDTEK-VCELFESMVEQGMNPDI-KSYTVVIDTLCADGRLNDGLSYFKQLTDM 970
Query: 411 GLTLEVYT 418
GL ++ T
Sbjct: 971 GLEPDLIT 978
>gi|410110145|gb|AFV61152.1| pentatricopeptide repeat-containing protein 123, partial [Nashia
inaguensis]
Length = 433
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+P+ +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 180 KMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 239
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 240 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 299
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 300 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGX 354
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +VV ++ LG PD +LN
Sbjct: 355 VKDITVFERMIHLLSKYKKYSNVVEVFDKXRGLGYFPDSDVIAIVLN 401
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 46 DLILYSNLIELSXKLCDYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLI 105
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ EM+E
Sbjct: 106 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 165
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ SV YNTLL + D EA +F M+ +N + + T
Sbjct: 166 GMAKEADKLFWGMRKMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 224
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 225 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 284
Query: 312 ELGITPD 318
G+ D
Sbjct: 285 SSGVEID 291
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD + ++M+ V ++I Y+NL++ + + +I+
Sbjct: 11 DRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCDYSKAISIF 70
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G P+ Y +++ +G+A+ + S+ EMK G+ + T Y+TLL M +
Sbjct: 71 SRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN 130
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EP++
Sbjct: 131 KKFLEALSVFSEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPSVVS 189
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 190 YNTLLRVYGDAE 201
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM LSP+ TY++L+ +G+ + S ++M++ + + LY+ L+ + +
Sbjct: 2 EMRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLC 61
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A IF +K S PD +++MI + EA ++ +EM AG PN
Sbjct: 62 DYSKAISIFSRLKRS-GFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSY 120
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + + E+ D C +++V Q
Sbjct: 121 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 164
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 14/230 (6%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R +P+ +++L+ + AGN V+ EMK G+ PN+ TY+ ++D + R+ + +
Sbjct: 1277 RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRA 1336
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-A 221
++ EM D G PN T+ +L+R + +A E L VY +MK G YN L+ +
Sbjct: 1337 HDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIES 1396
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
C D +EA +I +K + C ++ +F+ + S G V+ A MF +M +
Sbjct: 1397 HCRD-DNLEEAVKILNSVK--KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCR 1453
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
PN L++ + + TD V++ + E I P+ FCG
Sbjct: 1454 PNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCG 1503
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DPNA F+ L++++ AG + L VY +MK +G P+ ITYN L+++ R +
Sbjct: 1349 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVK 1408
Query: 165 I----------------------------------YKEMTDNGLSPNWNTYASLLRAYGR 190
I + +M D PN TY L+R +
Sbjct: 1409 ILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFAD 1468
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ + L + +EM E ++ + Y L++ +G+ + A+ F++M + +P
Sbjct: 1469 KKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLP 1528
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ ++ G++ + E + +M+ GF
Sbjct: 1529 VYEMVLQQLRKAGQLKKHEELVEKMVNRGF 1558
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 21/246 (8%)
Query: 146 YNNLLDTMGRAKR---PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
Y ++D G+ ++ WQ+ + K T N P T+ L+R Y +A + + +
Sbjct: 1181 YMEMIDLAGKVRQFDLAWQLIDLMK--TRNVEIPV-ETFTILVRRYVKAGLAAEAVHAFN 1237
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
M++ G + ++ +++ + EA F+ +K + +PD ++S++
Sbjct: 1238 RMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLK--DRFEPDVVVYTSLVHGWCRA 1295
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDD 319
G +SEAE +F EM AG PN++ + +I G+ R DV + + ++G P+
Sbjct: 1296 GNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDV---FSEMIDVGCDPNA 1352
Query: 320 RFCGCLLNVMTQTPKEELGKLVECVEKSNSKLG----YVVKLLLEEQDIEGDFKKEATEL 375
L+ V + + E K+++ V +LG + L E D +EA ++
Sbjct: 1353 ITFNNLMRVHVKAGRTE--KVLQ-VYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKI 1409
Query: 376 FNSISK 381
NS+ K
Sbjct: 1410 LNSVKK 1415
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ ++F+ + G+ + ++ +MK + +PN +TYN L+ K V +
Sbjct: 1419 LNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKL 1478
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLLAMCA 224
KEM +N + PN NTY L+ + + + S ++EM +EK ++ S+ +Y +L
Sbjct: 1479 RKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLR 1538
Query: 225 DVGYTDEAFEIFEDM 239
G + E+ E M
Sbjct: 1539 KAGQLKKHEELVEKM 1553
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ L+ YG AG D + E MKA GV+ + YN L++ +A+ P + + +
Sbjct: 282 VDDRPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAV 341
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M +G + TY S++ AY R + S+ EMK G+Q Y L++
Sbjct: 342 LQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCR 401
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A I M++++ C+P ++ MI+ + S+AE MF M + G P+
Sbjct: 402 AGRLGDAERILRAMQNAK-CKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAV 460
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI Y K+++ R+ +LG P+
Sbjct: 461 TFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPN 493
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI ++ A + V + M+A G + + ITY ++++ R K+P +++ EM
Sbjct: 322 YNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMK 381
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P +Y L+ AY RA D + R M+ + +V +YN +++ A
Sbjct: 382 RAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRS 441
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A +F+ M+ +PD+ TF+++I++ K +AE + M + G +PN L
Sbjct: 442 QAERMFQTMQDC-GLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKIL 500
Query: 291 IQCYGKAQRTDDVVRALNRLPELGIT 316
++ Y + D R + + GI+
Sbjct: 501 LKAYTDYNNSIDAERIRLDMRKAGIS 526
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 43/269 (15%)
Query: 91 KEKSY----DTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
K KSY D +R ++ R P+ + LI YG G + + +A G++P+ I
Sbjct: 192 KLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAI 251
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
Y L+ + + + +M D G+ + YA+L+ AYG+A ++ + M
Sbjct: 252 AYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD-RPYAALVAAYGKAGLTDNVNKILETM 310
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
K G++ S TLYNTL+ + + ++A + + M++ + CQ D T++S++ S +
Sbjct: 311 KASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQA-DGCQCDEITYTSVMEAYSRNKQ 369
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD---VVRALNR------------ 309
AE+M EM AG +P LI Y +A R D ++RA+
Sbjct: 370 PLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNM 429
Query: 310 --------------------LPELGITPD 318
+ + G+ PD
Sbjct: 430 MISGYASAKMRSQAERMFQTMQDCGLRPD 458
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 35/238 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI+ +G +++ +V+ M+ P++ L+ T G P ++
Sbjct: 179 DVVSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAM 238
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR-----------------------------ARYGEDT 197
+ GL P+ Y +L+ AY + A YG+
Sbjct: 239 QYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDDRPYAALVAAYGKAG 298
Query: 198 LS-----VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
L+ + MK G++ S TLYNTL+ + + ++A + + M+ ++ CQ D T+
Sbjct: 299 LTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQ-ADGCQCDEITY 357
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+S++ S + AE+M EM AG +P LI Y +A R D R L +
Sbjct: 358 TSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAM 415
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN+ L + R TI+K GL P+ +Y +L++ +G+ + V+ M+
Sbjct: 148 YNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQ 207
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+ L L++ + G A E ++ QPD+ +++++ + G
Sbjct: 208 RNRCPPDLKLCTVLISTYGNGGLPVLA-ESAMQYAQAQGLQPDAIAYTALVHAYAQEGLW 266
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
EAE ++ML+ G + +L+ YGKA TD+V + L + G+ L
Sbjct: 267 EEAEKTLSDMLDVGIVDD-RPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTL 325
Query: 326 LNVMTQTPKEELGKLV 341
+N+ ++ E + V
Sbjct: 326 INIHSKAEAPEKARAV 341
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P ++ LI Y AG + M+ KP + YN ++ AK Q + +++
Sbjct: 389 PVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQ 448
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M D GL P+ T+ +L+ Y ++R + Y M++ G + + Y LL D
Sbjct: 449 TMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAYTDYN 508
Query: 228 YTDEAFEIFEDMKSS 242
+ +A I DM+ +
Sbjct: 509 NSIDAERIRLDMRKA 523
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 74 PKSYIWVNPKSPRASKLKEKSYDTRA-RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYE 132
P SY + RA +L + RA +N K + ++ +I Y +A +++
Sbjct: 389 PVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQ 448
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
M+ G++P+ +T+N L+ ++++ Q + Y M G PN TY LL+AY
Sbjct: 449 TMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAYTDYN 508
Query: 193 YGEDTLSVYREMKEKGMQL 211
D + +M++ G+ L
Sbjct: 509 NSIDAERIRLDMRKAGISL 527
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 232 AFEIFEDMKSSENCQPDSW-----TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
AF I + SS+ + DS ++S + C G++ +A +F AG +P++
Sbjct: 123 AFTIVQATSSSDYLEDDSQLNSVKDYNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVS 182
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
T+LIQ +GK + + V +R+ PD + C L++
Sbjct: 183 YTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLIS 223
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 3/228 (1%)
Query: 102 EKWRIDP--NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K R P F +I + G L+V++ M+ G P + TYN L+ + ++
Sbjct: 583 QKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM 642
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + I EMT G+SPN +TY +++ Y + + +++++G+QL V Y L
Sbjct: 643 EKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEAL 702
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L C G A + ++M S++N +++ ++ +I + RG + EA + +M G
Sbjct: 703 LKACCKSGRMQSALAVTKEM-SAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREG 761
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+P++ TS I KA + + + +G+ P+ + L+N
Sbjct: 762 VQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIN 809
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 108/211 (51%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + T++ Y G+ D CL V+E K G+ P++ITY L++ + + + + KE
Sbjct: 452 DIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKE 511
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY+ L+ + + + + +++ ++ + G++ V LYN ++ +G
Sbjct: 512 MEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGK 571
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A ++M+ + +P + TF +I + +G++ +A +F+ M +G P +
Sbjct: 572 MDRAVCTVKEMQKQRH-KPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYN 630
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + ++ + + L+ + G++P++
Sbjct: 631 ALILGLVEKRKMEKAEQILDEMTLAGVSPNE 661
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 10/225 (4%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
N+ ++ +E +K KP+ Y +++ R + + +++M G+ P+ + Y
Sbjct: 295 NWQAVVSAFERIK----KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYT 350
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+L+ AY R E+ LS R+MKE+G+++S+ Y+ L++ A G + A F++ K
Sbjct: 351 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAK-E 409
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
++ ++ + ++I R + +AEA+ EM E G + + + +++ Y D
Sbjct: 410 KHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDK 469
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKS 347
+ R E G+ P GCL+N+ + LGK+ + +E S
Sbjct: 470 CLLVFERFKECGLNPSVITYGCLINLYAK-----LGKVSKALEVS 509
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 11/249 (4%)
Query: 71 GSSPKSYIWVNPKSPRAS---KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G SP + + AS K +Y T+ R+E ++D + L+K +G
Sbjct: 656 GVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSA 715
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L V +EM A + N YN L+D R W+ + ++M G+ P+ +TY S + A
Sbjct: 716 LAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINA 775
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+A + EMK G++ +V Y TL+ A ++A FE+MK S +P
Sbjct: 776 CSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLS-GLKP 834
Query: 248 DSWTFSSMITICSCRGKVSEA------EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT- 300
D + ++T R V+ ++ EM++ ++ +C K +RT
Sbjct: 835 DRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTG 894
Query: 301 DDVVRALNR 309
++ AL +
Sbjct: 895 GEITEALQK 903
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 16/241 (6%)
Query: 98 RARN--EKWR---IDP--NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
RAR EK R I+P + ++ LI Y + + L+ +MK G++ +++TY+ L+
Sbjct: 329 RARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILV 388
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ ++E + S N Y +++ AY + + ++ REM+E+G+
Sbjct: 389 SGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGID 448
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+ +Y+T++ VG D+ +FE K P T+ +I + + GKVS+A
Sbjct: 449 APIDIYHTMMDGYTMVGDEDKCLLVFERFKEC-GLNPSVITYGCLINLYAKLGKVSKALE 507
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
+ EM AG + N+ + LI + K + + L + GI PD FC
Sbjct: 508 VSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFC 567
Query: 323 G 323
G
Sbjct: 568 G 568
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 10/220 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ +I Y N D + EM+ G+ + Y+ ++D + +++
Sbjct: 419 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFK 478
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ GL+P+ TY L+ Y + L V +EM+ G++ ++ Y+ L+ +
Sbjct: 479 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWA 538
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
AF IFED+ + +PD ++++IT GK+ A EM + +P +
Sbjct: 539 NAFAIFEDL-IKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPI 597
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
I + R ++ +AL+ + R GC+ V T
Sbjct: 598 IHGFA---RKGEMKKALDVFDMM------RMSGCIPTVHT 628
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R+ PN F+ L+ + + G L+ +M+ G+ P+ +TYN LL+ R +
Sbjct: 204 RLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEA 263
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+T+ M G+ P TY +L+ AY R + + V M G + + YN L A
Sbjct: 264 RTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAG 323
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G DEAF++ ++M+ PD T+++++ C + S+A + EM E G +
Sbjct: 324 LCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKS 383
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L +++ + + ++ + L + E G+TPD
Sbjct: 384 SLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPD 419
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 121 AGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
AG D + +EM+ +G V P+++TYN L+D + +R + +EM + G+ +
Sbjct: 327 AGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLV 386
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
T+ +++ R E+ L M E+G+ V YNTL+ G +AF + ++M
Sbjct: 387 THNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEM 446
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
S + D++T ++++ + EAE + + GF P+ +++ Y K +
Sbjct: 447 VRS-GLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS--KLGYV--- 354
+ + + + + +TP L+ ++ +GKL E ++K N ++G V
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLST-----MGKLTEAIDKLNELMEMGLVPDD 560
Query: 355 ------VKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLL 408
+ +E D+E F+ + NS DV CN L++ LE A KL
Sbjct: 561 TTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDV--VTCNTLMNGLCLYGRLEKAMKLF 618
Query: 409 E 409
E
Sbjct: 619 E 619
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L+ + + A+ + PN T+N L+ T + +M GLSP+ TY +LL A
Sbjct: 194 LDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNA 253
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R + ++ MK++G+ + YNTL++ A +G+ +A ++ E M ++ +P
Sbjct: 254 HCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAM-TAFGFEP 312
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF-EPNLFVLTSLIQCYGKAQRTDDVVRA 306
D WT++ + GKV EA + +EM + G P++ +L+ K QR+ D +
Sbjct: 313 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNL 372
Query: 307 LNRLPELGI 315
L + E G+
Sbjct: 373 LEEMREKGV 381
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 4/196 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI AGN + +EM G+K + T N LL + + KR + + +
Sbjct: 419 DVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 478
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G P+ +Y +++ AY + E L ++ EM ++ + S++ YNTL+ + +
Sbjct: 479 RAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTM 538
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA + ++ PD T++ +I G + +A N+M+E F+P++
Sbjct: 539 GKLTEAIDKLNELMEM-GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVT 597
Query: 287 LTSLIQ---CYGKAQR 299
+L+ YG+ ++
Sbjct: 598 CNTLMNGLCLYGRLEK 613
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRA--KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
V+P++ N +L + R+ P + + L PN T+ L+ + D
Sbjct: 168 VRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLAD 227
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
LS +M+ G+ YNTLL G EA + MK E P T+++++
Sbjct: 228 ALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKK-EGIVPTRATYNTLV 286
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ + G + +A + M GFEP+L+ L +A + D+ + + + +LGI
Sbjct: 287 SAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIV 346
Query: 317 PDD 319
D
Sbjct: 347 SPD 349
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 38/174 (21%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I Y G+ + + +M KP+++T N L+
Sbjct: 559 DDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLM---------------- 602
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
NGL YGR E + ++ EKG ++ V YNTL+ A+C D
Sbjct: 603 -----NGLC-----------LYGRL---EKAMKLFESWVEKGKKVDVITYNTLIQALCKD 643
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
D A F DM+ QPD +T++ +++ S G+ EA+ M +++ E+G
Sbjct: 644 -NDVDTALRFFADME-VRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 2/179 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G + + ++E G K ++ITYN L+ + + + +M GL P+ TY
Sbjct: 609 GRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTY 668
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
LL A A + + ++ E G Y ++ + V T + E+ D++S
Sbjct: 669 NVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVE-TGKDPEVKSDIES 727
Query: 242 SENCQPDSW-TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
N Q D +++ I G++ EA+A+ +EM++ G + +L++ K Q+
Sbjct: 728 VGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786
>gi|156070758|gb|ABU45173.1| unknown [Solanum melongena]
Length = 427
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 8/290 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM- 169
S++I+ YG A FD L +Y +M +G + I++N LL +K +V ++ E+
Sbjct: 103 LSSIIRSYGVARMFDHALKIYHQMDDLGTPRSAISFNVLLSACMHSKLYDRVAQLFDEIP 162
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P+ +Y L+R+Y E + ++EM+EKG++++ + T+L G +
Sbjct: 163 VKYGFLPDKVSYGVLIRSYCEMGLPEMAMERFKEMEEKGVEITAVAFTTILHSFYKKGKS 222
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA-EAMFNEMLEAGFEPNLFVLT 288
DEA ++ +M S C PD ++ + I + +G E +A+ EM AG +P+
Sbjct: 223 DEAERVWNEM-VSRGCGPDVGAYN--VKIMNIQGSKPEGVKALIEEMSNAGLKPDTISYN 279
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
L+ CY K Q D+ + L G P+ L+ + + + E G V S
Sbjct: 280 YLMTCYCKNQLMDEAQKVYEDLKTNGCNPNAATFRTLIFYLCKKGRFETGYKVFRESVSV 339
Query: 349 SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNL 398
K+ + L + +EG KK +S+ VKK + L+ + L
Sbjct: 340 HKIPDFITL---KYLVEGLVKKSRWRDAKGMSRTVKKKFPPNLVKAWIKL 386
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 4/197 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+ Y G + + ++EM+ GV+ + + +L + + + + + ++
Sbjct: 170 DKVSYGVLIRSYCEMGLPEMAMERFKEMEEKGVEITAVAFTTILHSFYKKGKSDEAERVW 229
Query: 167 KEMTDNGLSPNWNTY-ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM G P+ Y ++ G G L EM G++ YN L+
Sbjct: 230 NEMVSRGCGPDVGAYNVKIMNIQGSKPEGVKAL--IEEMSNAGLKPDTISYNYLMTCYCK 287
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA +++ED+K++ C P++ TF ++I +G+ +F E + P+
Sbjct: 288 NQLMDEAQKVYEDLKTN-GCNPNAATFRTLIFYLCKKGRFETGYKVFRESVSVHKIPDFI 346
Query: 286 VLTSLIQCYGKAQRTDD 302
L L++ K R D
Sbjct: 347 TLKYLVEGLVKKSRWRD 363
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN-NLLDTMGRAKRPWQVKTIYKE 168
AF+T++ + G D V+ EM + G P++ YN +++ G +P VK + +E
Sbjct: 208 AFTTILHSFYKKGKSDEAERVWNEMVSRGCGPDVGAYNVKIMNIQG--SKPEGVKALIEE 265
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M++ GL P+ +Y L+ Y + + ++ VY ++K G + + TL+ G
Sbjct: 266 MSNAGLKPDTISYNYLMTCYCKNQLMDEAQKVYEDLKTNGCNPNAATFRTLIFYLCKKGR 325
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ +++F + S PD T ++ + + +A+ M + ++ F PNL
Sbjct: 326 FETGYKVFRESVSVHKI-PDFITLKYLVEGLVKKSRWRDAKGM-SRTVKKKFPPNL 379
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ +I + AG D + +EM+ GV PN++T+N L+ + K + K +
Sbjct: 423 SYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKML 482
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
++GL P+ T+ SL+ +D + EM E G++ + YN L+ G+
Sbjct: 483 MEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHV 542
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSS-MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A ++ MK + PD+++F++ +++ C + KV +A +FN ML G P+ +
Sbjct: 543 NKAIDLLNKMK-KDGITPDAYSFNAPILSFCRMK-KVDKARNIFNAMLRLGVVPDNYTYN 600
Query: 289 SLIQCYGKAQRTDD 302
SLI+ +R D+
Sbjct: 601 SLIKALCDERRIDE 614
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+L+ ++GR + V+ +M G++ S +YN L+ G D A+ F+ M +
Sbjct: 146 ALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQM-PA 204
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ CQPD +T+++++ RG + EA + +M AG PN+F T L+ + A R +D
Sbjct: 205 DGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPED 264
Query: 303 VVRALNRLPELGITPDD 319
V + + E G++P++
Sbjct: 265 AVHVFDTMKEKGVSPNE 281
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G+ + +YN ++D +A + I KEM + G+ PN T+ +L+ Y + +
Sbjct: 416 GLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNA 475
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+V + + E G+ + + +L+ D+AF+ F +M + +P++ T++ ++
Sbjct: 476 KAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNEM-AEWGVRPNAHTYNVLMH 534
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G V++A + N+M + G P+ + + I + + ++ D N + LG+ P
Sbjct: 535 ALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVP 594
Query: 318 DD 319
D+
Sbjct: 595 DN 596
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G P Y ++ ++ K + K M +GL +Y ++ + +A +
Sbjct: 381 GGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKA 440
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ +EM+EKG+ ++ +NTL++ + +G A + + M PD TF+S+I
Sbjct: 441 AEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLK-MLMEHGLIPDIITFTSLIN 499
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++ +A FNEM E G PN L+ A + + LN++ + GITP
Sbjct: 500 GLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITP 559
Query: 318 D 318
D
Sbjct: 560 D 560
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 129/345 (37%), Gaps = 76/345 (22%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ G D L + +M+ G++PN+ TY L+D A RP ++ M
Sbjct: 214 YNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMK 273
Query: 171 DNGLSPNWNTYASLL----RAYGRAR-------------------------------YGE 195
+ G+SPN +Y +L+ R GR + +
Sbjct: 274 EKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAK 333
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAM---CADV----GYTDE--------AFEIF-EDM 239
+ + V ++M +G L ++ +++ C ++ G D+ F+++ +
Sbjct: 334 EVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVI 393
Query: 240 KSSENCQPDS-----------------WTFSSMITICSCR-GKVSEAEAMFNEMLEAGFE 281
KS C+ S T +M+ C + G V +A + EM E G
Sbjct: 394 KSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVL 453
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
PNL +LI Y K + L L E G+ PD L+N + T +L
Sbjct: 454 PNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHT--HQLDDAF 511
Query: 342 EC----VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
+C E + +L+ G K A +L N + KD
Sbjct: 512 DCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNK-AIDLLNKMKKD 555
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
E++ G + + L+ + GR ++ +M GL P+ Y +L+ A RA
Sbjct: 131 EVRGCGCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAG 190
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
+ +++M G Q YNTL+ G DEA + M+ + +P+ +T+
Sbjct: 191 AVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGA-GIRPNVFTY 249
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI----QCYGKAQRTDDVVRALN 308
+ ++ G+ +A +F+ M E G PN +L+ +C G+ + + L
Sbjct: 250 TMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLG 309
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVECVEKSNSKLGYVV 355
R P P C+L ++ K E+ K +VE +K NS+ GY++
Sbjct: 310 REPP----PHHSAWQCMLYCLS---KNEMAKEVVEVTKKMNSR-GYLL 349
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+ ++D +W + PNA ++ L+ +AG+ + +++ +MK G+ P+ ++N
Sbjct: 508 DDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAP 567
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ + R K+ + + I+ M G+ P+ TY SL++A R ++ + M+ G
Sbjct: 568 ILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGS 627
Query: 210 QLSVTLYNTLLAMCADVGYTDE 231
S T ++T L + + + T +
Sbjct: 628 --SATTHHTHLPIVSALTKTGQ 647
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ L+++ +G D Y +M G PN TY LL ++ +A+R + +++++ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G SPN +Y+ L+ R + ++ + EM + G Q +V Y +LL+ +G
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA ++F M C PD ++ +I S +G + EA +F EMLE G P +F S
Sbjct: 139 KEAVDLFSRM-VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
L+ + + V + G P+ D FC
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + +L+ G ++++ M G P+ + YN L+D + + +
Sbjct: 120 PNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM + G P TY SLL + R S++++M +G ++ +N LL
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G EA +F +M+S C PD ++++++ +GK EA+ + EM+ +G P++
Sbjct: 240 MGDMVEAHRLFLEMRSL-GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI Y K+ D ++ +P+ G+ PD
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 118/232 (50%), Gaps = 5/232 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ L+ + G+ ++ EM+++G P++++YN L+ M +P + + +
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRL 284
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM +G+ P+ +Y L+ Y ++ + + ++ E+ + G++ Y+T++
Sbjct: 285 LREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCR 344
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNL 284
G AF +F+DM ++ + PD+ ++ I CRG +++E+ +F M++ P +
Sbjct: 345 AGKVGAAFVVFKDMIANGS-APDAAVVIPLV-IGLCRGERLTESCELFQAMVKFECVPLI 402
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
L+ KA+R+DDV + L E G +PD +L + ++ +E
Sbjct: 403 PEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKE 454
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 6/236 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+ KLKE + D +R P+ ++ LI + G+ ++EEM G P +
Sbjct: 134 KMGKLKE-AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
TYN+LL R +V++++K+M G PN T+ +LL + + + ++ E
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252
Query: 204 MKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
M+ G V YNTL+ MC+ G EA + +M S PD +++ +I S
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSK-GKPHEAQRLLREMIRS-GVGPDIVSYNILIDGYSKS 310
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + A +F E+ ++G EP+ F +++I C +A + + G PD
Sbjct: 311 GALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPD 366
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
++YN LL+ + ++ R V Y +M G PN TY LLR+ +A+ E+ SV+R
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M +G +V Y+ L+A DEA E+ +M + QP+ T+ S+++ G
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLSGLCKMG 136
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
K+ EA +F+ M+ G P+ V LI + K + R + E G P
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN +S+L++ Y +G ++ V+ EM G++P+++ Y L+D++ + + +
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M GL PN TY L+ + ++ + V ++M EKG+ V YNTL+
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 224 ADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+DV DEA + E+M +N +P+ TF+S+I G++ +A + M E G
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
NL LI + + + ++ + LG+ PD
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPD 396
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 5/200 (2%)
Query: 108 PNAFSTLIKLYGTAGN--FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA S + + + D + + M++ GV+ +++TY L+ + A + +
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM ++G+ PN Y+SLL+ Y ++ ED V+ EM EKG++ V +Y L+
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNL 284
VG +A + DM +P+ T++ +I C C+ G V EA + +M E G P++
Sbjct: 233 VGKAKKAHGVM-DMMVRRGLEPNVVTYNVLIN-CMCKEGSVKEAIGVLKKMSEKGVAPDV 290
Query: 285 FVLTSLIQCYGKAQRTDDVV 304
+LI+ D+ +
Sbjct: 291 VTYNTLIKGLSDVLEMDEAM 310
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+PN ++Y L+ + + Q + + M G+ + TY +L+R A + +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
+ EM E G++ +V +Y++LL G ++ ++F +M S + +PD ++ +I
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM-SEKGIEPDVVMYTGLIDSL 230
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GK +A + + M+ G EPN+ LI C K + + L ++ E G+ PD
Sbjct: 231 CKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 37/256 (14%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+++I+ G V M+ G N++TYN L+ + R + +
Sbjct: 323 VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAM 382
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGR---ARYGEDTLSVYRE----------------M 204
+ EMT GL P+ TY+ L++ + + ED LS R+ M
Sbjct: 383 ELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442
Query: 205 KEKGMQ---------------LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
E+GM L V Y+T++ G A E+ + + E PD+
Sbjct: 443 CEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI-VDEGLTPDA 501
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T+S +I + + G + A + +M +GF P++ V SLIQ Y + V+ +
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIRE 561
Query: 310 LPELGITPDDRFCGCL 325
+ I D + L
Sbjct: 562 MITKNIALDSKIISTL 577
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEKSYDTRARN------EKWRIDPNAFSTLIKLYGTAGNF 124
G P+ + ++ P + E+ RARN + +D A+ST+I AG+
Sbjct: 427 GIEPELFHYI----PLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDL 482
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+ + + G+ P+ +TY+ +++ ++ + K+MT +G P+ + SL
Sbjct: 483 KTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSL 542
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ Y L + REM K + L + +TL
Sbjct: 543 IQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577
>gi|410110139|gb|AFV61149.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
salviifolia]
Length = 378
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 121 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 180
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 181 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 240
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 241 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGE 295
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I K ++ +V +++ LG PD +LN
Sbjct: 296 VKDITVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLN 342
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 56 PNTTSYSTLLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 115
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 116 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 175
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 176 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 234
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 235 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 268
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ ++++ +K G P+++ YN +++ G+AK + +++ EM G+ PN +Y+
Sbjct: 3 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 62
Query: 183 SLLRAYGRARYGEDTLSVYREMKE-----------------------------------K 207
+LL Y + + LSV+ EM+E
Sbjct: 63 TLLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 122
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++ +V YNTLL + D EA +F M+ +N + + T++SM+ I + +
Sbjct: 123 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEK 181
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A + EM G EPN +++I +GK + D +L G+ D
Sbjct: 182 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEID 232
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 58/129 (44%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
++ R +E R D T I + AG + V+ + G ++ + ++ +
Sbjct: 250 AHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMIHLL 309
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ K+ V ++ +M G P+ + A +L AYG+ + + VY EM+E G S
Sbjct: 310 SKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCVFSD 369
Query: 214 TLYNTLLAM 222
++ +L++
Sbjct: 370 EVHFQMLSL 378
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G + ++ TYN LD + +A +++M G P+ TY+ +LR +A +
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ +++E G++L+V Y+ ++ C D+A EIF+ M S C PD TF+S++
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152
Query: 258 -ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+CS ++SEA +F M +AG EPN+ ++L+ KA R D+ R + E
Sbjct: 153 GLCSGE-RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 317 PD 318
PD
Sbjct: 212 PD 213
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 12/281 (4%)
Query: 27 FQRDDSL-SFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPK--SYIWVNPK 83
FQR S+ FY +L+ ++ + + +Q G SP +Y +
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383
Query: 84 SPRASKLKEKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
+ KL +++ D K + P++F ++++ AG D L+ E MKA G P
Sbjct: 384 LCKLGKL-DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++TYN LLD + +A R + T +M +P+ +Y ++ A R+ +++
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+EM ++G+ LY++LL A G D A E+ + + C+PD + M+ C
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK----TSLCKPD-FVMHKMVLDGLC 557
Query: 262 R-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ GK +A + M +AGF + F S++ K + D
Sbjct: 558 KAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVD 598
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+Y+ + ++ P+ F+ I L G AG D + +++ GVK N+ITY+ ++D
Sbjct: 57 AYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVID 116
Query: 152 TMGRAKRPWQVKTIYKEMTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+A R I+K M+ G P+ T+ SLL+ + ++ M + G +
Sbjct: 117 GCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE 176
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+V Y+TLL G DEA ++E+M ++C PD ++S +T +V+EA
Sbjct: 177 PNVISYSTLLDGLCKAGRLDEACRLWEEM-VEKSCVPDLVAYTSFVTGLCKANRVAEACD 235
Query: 271 MFNEMLEAGFEPNLFVLTSLI 291
+M+ G + + +++I
Sbjct: 236 CCRKMVTKGSKADAVAFSTVI 256
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 42/304 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+K + ++E M G +PN+I+Y+ LLD + +A R + ++
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + P+ Y S + +A + R+M KG + ++T++ +
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262
Query: 227 GYT-----------------DEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEA 268
G+ DEA + FE+M S N P + F+++I +C + ++ +
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEM-ISRNHPPSAELFNTLIHAVCKSK-RLPDG 320
Query: 269 EAMFNE---MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+F M E PNL ++ KA++ D+ +N + G++PD L
Sbjct: 321 VLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSAL 380
Query: 326 LNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATE--LFNSISKDV 383
++ + + LGKL + LLEE EG F T+ + N++SK
Sbjct: 381 VDGLCK-----LGKLDRACD------------LLEEMSKEGVFPDSFTDASILNALSKAG 423
Query: 384 KKAY 387
K Y
Sbjct: 424 KVDY 427
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY--- 166
A + +I+ +G D +EEM + P+ +N L+ + ++KR ++
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + PN TY ++ +A+ ++ + EM G+ V Y+ L+ +
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A ++ E+M S E PDS+T +S++ S GKV A + M G P+L
Sbjct: 388 GKLDRACDLLEEM-SKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ KA R D+ + L ++ TPD
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 111 FSTLIKLYGTAGNF-DGCLNVYEEMKAIG---VKPNMITYNNLLDTMGRAKRPWQVKTIY 166
F+TLI + DG L +++ MK++ PN+ TYN ++D + +AK+ + + +
Sbjct: 304 FNTLIHAVCKSKRLPDGVL-LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + GLSP+ TY++L+ + + + EM ++G+ ++L +
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A E MK+ + PD T+++++ G++ EA +M+ A P++F
Sbjct: 423 GKVDYALSHLETMKARGS-TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
T +I ++ + + + G+ PD LL+ + + E+L
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA 533
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 19/241 (7%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNL 149
K K + R +++ +S +I A D L +++ M + G P+++T+N+L
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L + +R + +++ M G PN +Y++LL +A ++ ++ EM EK
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI-CS-------- 260
+ Y + + EA + M ++ + D+ FS++I I C
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKM-VTKGSKADAVAFSTVIGILCKKGHAEEAQ 269
Query: 261 -------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
CR G + EA F EM+ P+ + +LI K++R D V R+
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 313 L 313
+
Sbjct: 330 M 330
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++KG Q SV YN L A A+E F+ M+ PD +T+S ++ G+
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQ-RRGYPPDDFTYSIVLRGLCKAGE 88
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ +A+ + ++ E+G + N+ + +I KA R DD + + G GC
Sbjct: 89 LDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGG--------GC 140
Query: 325 LLNVMT 330
+ +V+T
Sbjct: 141 VPDVVT 146
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ Y G D ++++ +M+ G+ PN++ Y L+D + + R + +
Sbjct: 373 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKF 432
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + G++PN + SL+ E + EM ++G+ + +NTL+ +V
Sbjct: 433 NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 492
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E + D+ +PD+++++ +I+ G+ EAE +F+ M+ G P
Sbjct: 493 GRVMEGRRLI-DLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVT 551
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+L+ Y A R DD + G+TP +L+ + QT +
Sbjct: 552 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 599
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 113/238 (47%), Gaps = 3/238 (1%)
Query: 99 ARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
A + R PN ++S +I + T G D N++ EM G+ P+++TY ++D + +A
Sbjct: 188 ADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKA 247
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + + ++++M DNG PN TY L+ Y ++ + + EM +G++ Y
Sbjct: 248 QLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTY 307
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
+LL G EA F+ M + +P T+ +I + +G +SE + + M+
Sbjct: 308 GSLLNYLCKNGRCREARFFFDSM-IRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMV 366
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
E G P+ + Y K D + N++ + G++P+ G L++ + + +
Sbjct: 367 ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 9/267 (3%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PNA F+TLI G + + M+ +GV+P+ +Y L+ R + +
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M GLSP TY +LL Y A +D ++REM KG+ V YNT+L
Sbjct: 535 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
EA E++ +M +S + D +T++ ++ V EA MF + G + N
Sbjct: 595 FQTKRFSEAKELYLNMINS-GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 653
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVE 342
+ T +I K R +D + +P G+ P+ + N++ + EE L
Sbjct: 654 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 713
Query: 343 CVEKSNSK-----LGYVVKLLLEEQDI 364
+EK+ + L +V+ LL DI
Sbjct: 714 AMEKNGTAPNSQMLNALVRRLLHRGDI 740
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ LI Y T G + + M G+ P+ +N + + I+ +M
Sbjct: 342 YGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR 401
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+GLSPN Y +L+ A + +D + +M +G+ ++ ++N+L+ V +
Sbjct: 402 QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWE 461
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ +M C P++ F+++I G+V E + + M G P+ F T L
Sbjct: 462 RAEELVYEMLDQGIC-PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 520
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
I Y RTD+ + + + +G++P +
Sbjct: 521 ISGYCLTGRTDEAEKVFDGMVSIGLSPTE 549
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVY-EEMKAIGVKPNMITYNNLL------------ 150
WR+D A + L+K ++V + M +G P+ ++Y LL
Sbjct: 121 WRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEA 180
Query: 151 --------DTMGRAKRPWQVK------------------TIYKEMTDNGLSPNWNTYASL 184
D GR P V ++ EM D G+ P+ TY ++
Sbjct: 181 LELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTV 240
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ +A+ + V+++M + G + + YN L+ +G E ++ E+M S+
Sbjct: 241 IDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM-SARG 299
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+PD +T+ S++ G+ EA F+ M+ G +P + LI Y ++
Sbjct: 300 LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMH 359
Query: 305 RALNRLPELGITPD 318
L+ + E G++PD
Sbjct: 360 SFLDLMVENGLSPD 373
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-----AMCADVGYTDEAFEIFEDM- 239
RA R+ +D L ++ E+ SV +N LL A C+ ++ A F M
Sbjct: 22 RARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSA--SELAVSHFNRMV 79
Query: 240 -KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ--CYGK 296
+ S+ P+ T+S +I G + A F +L+ G+ + + L++ C+GK
Sbjct: 80 RECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGK 139
Query: 297 -AQRTDDVVRALNRLPELGITPD 318
DV+ L R+PELG PD
Sbjct: 140 RVGEAMDVL--LQRMPELGCMPD 160
>gi|21618238|gb|AAM67288.1| unknown [Arabidopsis thaliana]
Length = 463
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 122/233 (52%), Gaps = 7/233 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLIK Y D V M+ G++P++ TYN+L+ + +V ++
Sbjct: 42 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 101
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR-ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM +GLSP+ +Y +L+ Y + R+GE ++ ++ G+ + YN LL
Sbjct: 102 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 161
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G+TD A E+F+ +KS +P+ T++ +I +C R +V + M E+ ++G+ PN
Sbjct: 162 SGHTDNAIELFKHLKS--RVKPELMTYNILINGLCKSR-RVGSVDWMMRELKKSGYTPNA 218
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC-LLNVMTQTPKEE 336
T++++ Y K +R + ++ ++ + G T D F C +++ + +T + E
Sbjct: 219 VTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG-FANCAVVSALIKTGRAE 270
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L+ +G+ D + +++ +K+ VKP ++TYN L++ + +++R V + +E
Sbjct: 150 DTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRE 208
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ +G +PN TY ++L+ Y + + E L ++ +MK++G +++ G
Sbjct: 209 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 268
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+EA+E ++ S D ++++++ + G + + + E+ G +P+ + T
Sbjct: 269 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 328
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ T + L + E+G+ P C CL++
Sbjct: 329 IIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLID 367
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 106/213 (49%), Gaps = 2/213 (0%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN FS T++ + A + L + E+M G P++++Y +++ + + + + +
Sbjct: 77 PNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRV 136
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+M G PN TY +L+ + R + + + R+M E+G + + YN ++
Sbjct: 137 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCS 196
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D A ++F++M+ S +C PD +T+S+++ GKV +A + M+ G PN+
Sbjct: 197 GRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVV 256
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+SL+ KA + D+ L R+ G +P+
Sbjct: 257 TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 289
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
PN +++L+ + FD + EM + G P++ITYN ++D + ++KR +
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M +GL+P+ TY+ ++ + + R+ ++ +V M + G Y TL+
Sbjct: 523 LFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFC 582
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G D+A EI + + S+ PD TFS I S RG++ +A + ML AG P+
Sbjct: 583 KTGNLDKALEILQ-LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDT 641
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+L++ + A RT+D V + + G PD+
Sbjct: 642 VTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDN 676
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +S+L+ AG D + + M G PN++TYN ++D + R + +
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM D G PN TY LL A+ + ED + + M EKG ++ YN+LL M
Sbjct: 313 LEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 372
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ A ++ M + C P+ +++++I KV E + +ML P++
Sbjct: 373 KDEVERACQLLSSM-IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 431
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I K R D N + E G TP+
Sbjct: 432 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN 464
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +ST++ +G D + E M + G PN++TY++LL + +A + + +
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ MT +G SPN TY +++ + + ++ + EM + G Q +V Y LL
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 338
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A + E M + P+ +T++S++ + + +V A + + M++ G PN+
Sbjct: 339 GKAEDAIGLVEVM-VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 397
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
++I KA + + V L ++ PD +++ M +T + ++
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA 449
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+ +TYN +++ + ++ R + +EM DNG +PN +Y ++L + +A E+ L +
Sbjct: 42 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+M +G V Y T++ + DEA + + M CQP+ T+ +++
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM-IQRGCQPNVITYGTLVDGFC 160
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
G + A + +M E G+ PN +++ ++ D ++ + E G P D
Sbjct: 161 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDV 220
Query: 321 F 321
F
Sbjct: 221 F 221
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 100/227 (44%), Gaps = 2/227 (0%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ +L+ ++ + + M G PN+++YN ++ + +A + + +
Sbjct: 358 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLL 417
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M N P+ T+ +++ A + + ++ ++E G ++ YN+L+
Sbjct: 418 LEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCK 477
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D+A + +M + C PD T++++I +V A +F +ML G P+
Sbjct: 478 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 537
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ +I K + D+ L + + G P G L++ +T
Sbjct: 538 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKT 584
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M KG++ ++ ++L D G +A F +M S+ C PDS T+++MI S
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM--SKTCPPDSVTYNTMINGLSKSD 58
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ +A + EM++ GF PN+F +++ + KA R ++ + L ++ G PD
Sbjct: 59 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPD 113
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP A + TLI + GN D L + + + + G P+++T++ +D + + R Q
Sbjct: 568 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 627
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ + M GL P+ TY +LL+ + A ED + ++ M++ G + Y TL+
Sbjct: 628 LLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 687
Query: 225 D-VGYTDEAFEIFEDM 239
D Y D E+ + M
Sbjct: 688 DKKSYKDLLAEVSKSM 703
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M GL + + S+LR A D + +REM + SVT YNT++ +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVT-YNTMINGLSKSDR 59
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D+A + E+M + P+ +++++++ +V A + +M+ G P++ T
Sbjct: 60 LDDAIRLLEEMVDN-GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
++I K + D+ R ++++ + G P+ D FC
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 160
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ ++ +++R+ P S L+ + G DG +++M G KP + TYN +
Sbjct: 80 EEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIM 139
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D M + + +++EM GL P+ TY S++ YG+ +DT+ + EMK
Sbjct: 140 IDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSC 199
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ V YN+L+ G + E + +MK S +P+ ++S+++ + +A
Sbjct: 200 EPDVITYNSLINCFCKSGKLPKGLEFYREMKQS-GLKPNVVSYSTLVDAFCKEDMMQQAI 258
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ +M G PN F TSL+ K D R N + E+G+
Sbjct: 259 KFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 7/210 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
FS LI L G + + +MK V P + N LL + + VK +K+M
Sbjct: 70 FSVLIDL----GMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 125
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P TY ++ + E ++ EMK +G+ YN+++ VG D
Sbjct: 126 GAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ FE+MKS +C+PD T++S+I C C+ GK+ + + EM ++G +PN+ ++
Sbjct: 186 DTVYFFEEMKSM-SCEPDVITYNSLIN-CFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDD 319
L+ + K ++ + +G P++
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNE 273
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 96/235 (40%), Gaps = 36/235 (15%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI + +G L Y EMK G+KPN+++Y+ L+D + Q Y
Sbjct: 202 DVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFY 261
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M G PN TY SL+ A + D + EM E G++ +V Y L+ D
Sbjct: 262 VDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDA 321
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
E MK EAE +F +M+ AG PNL
Sbjct: 322 ----------ERMK--------------------------EAEKLFGKMVTAGVIPNLAS 345
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+LI + KA+ D + LN L GI PD G + + K E K+V
Sbjct: 346 YNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVV 400
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ LI + A N D L + E+K G++P+++ Y + + ++ K
Sbjct: 339 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAK 398
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM +NG+ N Y +L+ AY ++ + L + EM+E +++V + L+
Sbjct: 399 VVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGL 458
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+A + F M + QP++ +++MI +V A +F +M + G P+
Sbjct: 459 CKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPD 518
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
TSL+ K + + +++ E+G+ D
Sbjct: 519 RTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLD 553
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 4/238 (1%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
+SP S L + S D + R+ PN F+ L+ + + G L M+ G+
Sbjct: 183 RSP--STLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLS 240
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+ +TYN LL+ R + + + M +G++P TY +L+ A+ R + + V
Sbjct: 241 PDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKV 300
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
M G + + YN L G DEAF + ++M+ PD T+++++ C
Sbjct: 301 VESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACF 360
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+A + EM + G +P L +++ K + ++ + L ++ E G+ PD
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 141/298 (47%), Gaps = 14/298 (4%)
Query: 121 AGNFDGCLNVYEEMKAIGVK-PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
AG D + +EM+ +G P+++TYN L+D + + + +EM D G+ P
Sbjct: 326 AGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
T+ ++++ + E+ L ++ E+G+ V YNTL+ G +AF + ++M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Query: 240 KSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
+ + D++T ++++ +C + + +AE + + + GF P+ +++ Y K
Sbjct: 446 -VGKGLKMDTFTLNTVLYNLCKMK-RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELGKLVECVEKS----NSKLG 352
+ +R +++ E + P L+ + + KE + KL E VEK +
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYN 563
Query: 353 YVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID-LCVNLNLLENACKLLE 409
++ +E D+E F+ + NS DV CN L++ LC++ L+ A KL E
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDV--VTCNTLMNGLCLH-GKLDKALKLFE 618
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ T++ Y N + L ++++M + P++ TYN L+ + R +R +
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E + GL P+ TY ++ AY + E+ + +M E + V NTL+
Sbjct: 548 NEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D+A ++FE + + D T++++I G V A F++M G +P+ F
Sbjct: 608 GKLDKALKLFESW-VEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELG 314
++ +A R+++ L++L + G
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y AGN + +EM G+K + T N +L + + KR + +
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ +Y +++ AY + E L ++ +M E+ + S++ YNTL+ +
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + + + PD T++ +I G + A N+M+E F+P++ +L
Sbjct: 542 EAIDKLNEF-VEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600
Query: 291 I 291
+
Sbjct: 601 M 601
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 4/184 (2%)
Query: 138 GVKPNMITYNNLLDTMGRAKR--PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
GV+P++ N +L + R+ P +++ + + L PN T+ L+ +
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
D L+ M+ G+ YNTLL G EA + MK + P T++++
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKR-DGIAPTQPTYNTL 284
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
++ + G + +A + M GFEP+L L +A + D+ R + + LG
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGT 344
Query: 316 T-PD 318
PD
Sbjct: 345 ALPD 348
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 39/69 (56%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D ++TLI+ G+ D L+ +++M+ G++P+ TYN +L + A R +
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685
Query: 165 IYKEMTDNG 173
+ ++ D+G
Sbjct: 686 MLHKLADSG 694
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 3/251 (1%)
Query: 71 GSSPKSYIWVNPKSPRASKLK-EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGC 127
G P +I+ + S SK + E++Y P+ +++LI L + G
Sbjct: 278 GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEA 337
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+V++ M G P+ +TY ++ + I + M +G+ P+ Y SL+
Sbjct: 338 RHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 397
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + + VY M G++ + +N L+ G TD AF +F++M E P
Sbjct: 398 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPP 457
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+++ +I G+VSEA F EM++ G P TSLI KA R + + +
Sbjct: 458 TLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV 517
Query: 308 NRLPELGITPD 318
+ +LG+ PD
Sbjct: 518 EDMVKLGVNPD 528
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA K +D +++T+IK + D ++EE+K G PN++ Y ++D + +A
Sbjct: 98 RAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAG 157
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R ++EM+ + P TY ++ +A+ D V+ +M +KG Y
Sbjct: 158 RIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYT 217
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TL+ + DEA ++ D+ ++ +P + T+ S++ ++EA+ + +M E
Sbjct: 218 TLIDGFSKASKMDEARKLL-DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 276
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
G EP LF+ TSL+ Y R ++ + L + G PD L++++ T +
Sbjct: 277 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 333
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + A D + + M G +P +TY +++ + + K +
Sbjct: 212 DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVI 271
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + G P + SLL Y E+ V EM +G V LY +L+ +
Sbjct: 272 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 331
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +F+ M + C PD+ T+ ++I S G V A + M ++G P+ F
Sbjct: 332 GRVPEARHVFDSM-IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 390
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ Y K +R D +R+ GI P+
Sbjct: 391 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 422
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+++L+ Y D VY+ M A G+KPN +T+N L+ + + + + +++
Sbjct: 387 DCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLF 446
Query: 167 KEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM + + P +Y L+ G+A + ++EM ++G+ Y +L+ A
Sbjct: 447 KEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAK 506
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++ EDM PD +S++IT V A +F EM++ G PN
Sbjct: 507 AGRIPEAKKLVEDM-VKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEV 565
Query: 286 VLTSLIQCYGKAQRTDDV 303
L + + A R D+
Sbjct: 566 TYKVLRRGFRAAGRALDL 583
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 7/208 (3%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLK--EKSYDTRARNEKWRIDPNAFSTLIKLYG--TAGNF 124
K+G P + + N KL+ ++++ R I PNA + + ++G G
Sbjct: 381 KSGVGPDCFAY-NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKT 439
Query: 125 DGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
D ++++EM + V P +++Y L+D +G+A R + ++EM D G+ P +TY S
Sbjct: 440 DRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTS 499
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ + +A + + +M + G+ V Y+ L+ D D A+++F++M
Sbjct: 500 LIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM-KR 558
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAM 271
C P+ T+ + G+ + EA+
Sbjct: 559 GCAPNEVTYKVLRRGFRAAGRALDLEAV 586
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 34/214 (15%)
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY-------- 188
+G +P +++YN ++ + + + + M DNG P+ + +L+ +
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 189 ------------------------GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
G + G+ +R + K L V Y T++ A
Sbjct: 61 GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKA-SLDVISYTTVIKGLA 119
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D DEA E+FE++K++ C P+ ++++I G++ + F EM + P
Sbjct: 120 DSKRIDEACELFEELKTA-GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTR 178
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T +I KAQ D + ++ + G PD
Sbjct: 179 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD 212
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 4/253 (1%)
Query: 69 KTGSSPKSYIW-VNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFD 125
+ G SP Y + V + + EK + EK I PN ++TLI
Sbjct: 200 RNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVK 259
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + M GV N+I+YN++++ + R +V + +EM GL P+ TY +L+
Sbjct: 260 EAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLV 319
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
+ + L + EM KG+ +V Y TL+ G A EIF+ M+
Sbjct: 320 NGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR-VRGL 378
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+P+ T++++I +G ++EA + +EM+ +GF P++ +L+ Y R + V
Sbjct: 379 RPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVG 438
Query: 306 ALNRLPELGITPD 318
L + E G+ PD
Sbjct: 439 ILRGMVERGLPPD 451
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 106/267 (39%), Gaps = 34/267 (12%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ + GN L + EM G+ PN++TY L++ M +A + I+
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M GL PN TY +L+ + + + V EM G SV YN L+ +
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430
Query: 227 GYTDEAFEIFEDMKS----------------------------------SENCQPDSWTF 252
G EA I M + PD+ T+
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
SS+I + K+ EA +F EM+ G P+ TSLI Y +R + + +
Sbjct: 491 SSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQ 550
Query: 313 LGITPDDRFCGCLLNVMTQTPKEELGK 339
G PD+ L+N + + + ++ K
Sbjct: 551 RGFLPDNVTYSVLINGLNKKARTKVAK 577
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 12/265 (4%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R R + ++TLI + G + V EM G P+++TYN L+ R
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I + M + GL P+ +Y++++ + R R + EM EKG+ Y++L
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493
Query: 220 L-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +C EAF++F +M PD T++S+I G++S+A + +EM++
Sbjct: 494 IQGLCLQQKLV-EAFDLFREMM-RRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
GF P+ + LI K RT R L +L PDD N + +
Sbjct: 552 GFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDD----VTYNTLIENCSNNEF 607
Query: 339 KLVECVEKSNSKLGYVVKLLLEEQD 363
K VE + K G+ +K L+ E D
Sbjct: 608 KSVEGLVK-----GFCMKGLMNEAD 627
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++D V+ +M GV PN+ TYN ++ + + ++M G+SPN TY
Sbjct: 187 DYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYN 246
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+L+ A + + ++ +++ R M G+ ++ YN+++ G E E+ E+M+
Sbjct: 247 TLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRG- 305
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ PD T+++++ G + + + +EM+ G PN+ T+LI C KA
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365
Query: 303 VVRALNRLPELGITPDDR 320
V +++ G+ P++R
Sbjct: 366 AVEIFDQMRVRGLRPNER 383
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
EEM+ G+ P+ +TYN L++ + Q + EM GLSPN TY +L+ +A
Sbjct: 301 EEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKA 360
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ ++ +M+ +G++ + Y TL+ G +EA+++ +M S P T
Sbjct: 361 GNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVS-GFSPSVVT 419
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++++ G+V EA + M+E G P++ +++I + + + + +
Sbjct: 420 YNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMV 479
Query: 312 ELGITPD 318
E G+ PD
Sbjct: 480 EKGVLPD 486
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 19/222 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I + + EEM GV P+ +TY++L+ + ++ + ++
Sbjct: 451 DVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLF 510
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM GL P+ TY SL+ AY L ++ EM ++G Y+ L+
Sbjct: 511 REMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKK 570
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGKVSEAEAM 271
T A + + E+ PD T++++I CS +G ++EA+ +
Sbjct: 571 ARTKVAKRLLLKLFYEESV-PDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRV 629
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
F ML+ +PN + +I + R +V +A N EL
Sbjct: 630 FKTMLQRNHKPNAAIYNLMIHGH---SRGGNVHKAYNLYMEL 668
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 6/161 (3%)
Query: 172 NGLSPNWNTYASLLRAYGR-----ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+G +P +Y ++L A R R +D V+R+M G+ +V YN ++
Sbjct: 161 HGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQ 220
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++ M+ E P+ T++++I + KV EA A+ M G NL
Sbjct: 221 GDLEKGLGFMRKME-KEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS 279
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
S+I R +V + + G+ PD+ L+N
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVN 320
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 37/307 (12%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++LI Y AGN L ++ ++K G+ P+++TYN LLD R + + +EM
Sbjct: 375 YNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMV 434
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G P+ +TY L+ + R + EM KG+Q YNT ++ +G T
Sbjct: 435 EQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTS 494
Query: 231 EAFEIFEDMKS----------------------------------SENCQPDSWTFSSMI 256
EAF++ E M S S+ QPD T++ +I
Sbjct: 495 EAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLI 554
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
RG++ EA +F+ ML +G P+ T I Y + ++ E G+
Sbjct: 555 HAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVR 614
Query: 317 PDDRFCGCLLNVMTQTPKEELG--KLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATE 374
P++ L++ + + + L E +E+ S Y LL++ EG++ +EA
Sbjct: 615 PNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNW-EEAIR 673
Query: 375 LFNSISK 381
L++ + +
Sbjct: 674 LYSEMHQ 680
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ LI Y G+ + + EM+ G+ P ++TYN ++ M R+ + + EM
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR 364
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL P+ TY SL+ Y +A ++ L ++ ++K G+ SV YN LL +G +
Sbjct: 365 AMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLE 424
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA ++M + CQPD T++ ++ ++ F+EML G +P+ F +
Sbjct: 425 EARRFKQEM-VEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483
Query: 291 I 291
I
Sbjct: 484 I 484
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 7/215 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++T I G+ + E M + G+ + +TYN LD + ++ ++
Sbjct: 476 DCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLW 535
Query: 167 KEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+M +GL P+ TY L+ A+ GR R D ++ M G+ S Y +
Sbjct: 536 MKMVSDGLQPDCITYTCLIHAHCERGRLREARD---IFDGMLVSGLPPSAVTYTVFIHAY 592
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G A+ F+ M E +P+ T++ +I G+ + A F+EMLE G PN
Sbjct: 593 CRRGNLYSAYGWFQKMLE-EGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPN 651
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ T LI K ++ +R + + + GI PD
Sbjct: 652 KYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
++TRARN P+ STL CL + EM GV P + N +L +
Sbjct: 164 FNTRARNPA----PSTCSTL------------CLAAFREMAHHGVPPFIKECNLVLRALR 207
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK--GMQLS 212
R ++++Y EM G+ P+ TY +LL ++ R + + REM+ + G S
Sbjct: 208 DEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPS 267
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
YN ++ A G ++A ++ + M+ S+ + ++TF+ +IT RG V +A A+
Sbjct: 268 DVTYNVVINGLARKGELEKAAQLVDRMRMSK--KASAFTFNPLITGYFARGSVEKAGALQ 325
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EM G P + ++I ++ + + +G+ PD
Sbjct: 326 LEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPD 371
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
+GN ++ +M + G++P+ ITY L+ R + + I+ M +GL P+ T
Sbjct: 525 SGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVT 584
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y + AY R +++M E+G++ + YN L+ +G T+ A++ F +M
Sbjct: 585 YTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEML 644
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
P+ +T++ +I G EA +++EM + G P+ +L + + + Q
Sbjct: 645 -ERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQ 701
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 4/198 (2%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM--TDNGLSPNWN 179
+D +VY EM +G++P+++TYN LLD+ R R Q + +EM G P+
Sbjct: 210 ARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDV 269
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
TY ++ R E + M+ + S +N L+ G ++A + +M
Sbjct: 270 TYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSVEKAGALQLEM 328
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ +E P T++++I G V A F EM G P+L SLI Y KA
Sbjct: 329 E-NEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387
Query: 300 TDDVVRALNRLPELGITP 317
+ + L G+ P
Sbjct: 388 LKEALWLFGDLKRAGLAP 405
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ I Y GN +++M GV+PN +TYN L+ + R R + EM
Sbjct: 585 YTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEML 644
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ GLSPN TY L+ + E+ + +Y EM + G+ +N L D G +
Sbjct: 645 ERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFK-GFDEGQSK 703
Query: 231 EAFEIFEDM 239
A + E++
Sbjct: 704 HAIQYMENV 712
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI + G ++++ M G+ P+ +TY + R + +++M
Sbjct: 550 YTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKML 609
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ PN TY L+ A R + EM E+G+ + Y L+ G +
Sbjct: 610 EEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWE 669
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMI 256
EA ++ +M PD T +++
Sbjct: 670 EAIRLYSEMH-QHGIHPDHCTHNALF 694
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 117/231 (50%), Gaps = 10/231 (4%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAK 157
+ RI+P +F+ +I G + ++ E+MK GV N+ITYN L+D MG+
Sbjct: 156 RRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIG 215
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ I KEM +G+ PN T+ L+ + + + + V+ EM +G++ +V YN
Sbjct: 216 KMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYN 275
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENC-QPDSWTFSSMITICSCRGK-VSEAEAMFNEM 275
+L+ + G +EA + + M +S C +P+ T ++++ C+ K V +A +F++M
Sbjct: 276 SLINGLCNNGKVNEATALRDQMVNS--CLKPNIITHNALLN-GFCKNKMVKQAGELFDDM 332
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+ G PN+ LI Y K + +D + G+ PD CL+
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLI 383
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 8/231 (3%)
Query: 93 KSYDTRARNEKWRID---PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
K Y A ++ R D PN F+ LI + N + V+ EM GVKPN++TYN
Sbjct: 216 KMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYN 275
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
+L++ + + + + +M ++ L PN T+ +LL + + + + ++ +M ++
Sbjct: 276 SLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQ 335
Query: 208 GMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ +VT YN L+ A C D D AF ++ M C PD T++ +I +G +
Sbjct: 336 GITPNVTTYNILIDAYCKDENMED-AFALYRIMLGKGVC-PDVSTYNCLIAGLCRKGDLE 393
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
A + +EM + +L LI +R L+ + G+ P
Sbjct: 394 AARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 99 ARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
A + + PN +++LI G + + ++M +KPN+IT+N LL+ +
Sbjct: 260 AEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKN 319
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
K Q ++ +M G++PN TY L+ AY + ED ++YR M KG+ V+ Y
Sbjct: 320 KMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTY 379
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N L+A G + A + +M +++ + D T++ +I +G++ +A + +EM
Sbjct: 380 NCLIAGLCRKGDLEAARNLVSEM-DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMC 438
Query: 277 EAGFEPNLFVLTSLIQCYGK 296
G +P+ ++I Y K
Sbjct: 439 RKGLKPSQLTYNTMIDGYCK 458
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY- 188
VY+EM ++P +I++N +++ + + + + I ++M G+S N TY +L+ Y
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209
Query: 189 --GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENC 245
G+ ++ +EM+ G+ + +N L+ C D + A ++F +M + +
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS-AAMKVFAEM-NRQGV 267
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+P+ T++S+I GKV+EA A+ ++M+ + +PN+ +L+ + K +
Sbjct: 268 KPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGE 327
Query: 306 ALNRLPELGITPD 318
+ +P+ GITP+
Sbjct: 328 LFDDMPKQGITPN 340
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R LK+ + + EK + P+ +S LI +Y AG ++ V +EM+A V+PN
Sbjct: 323 RTGSLKDAEF-VVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNS 381
Query: 144 ITYNNLLDTMGRAKRPWQVK-TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
++ +L R K WQ + K+M +G+ P+ + Y ++ +G+ + ++ +
Sbjct: 382 YVFSRILANY-RDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFE 440
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
M +G+ + +NTL+ G D A E+F +M+ P T++ MI +
Sbjct: 441 RMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQ-RGYSPCITTYNIMINSMGEQ 499
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
+ + A ++M G +PN T+L+ YGK+ R D + L L G P
Sbjct: 500 QRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMY 559
Query: 323 GCLLNVMTQTPKEELG 338
L+N Q EL
Sbjct: 560 NALINAYAQRGLSELA 575
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++ +I +G D + +E M + G+ P+++T+N L+D ++ R + ++
Sbjct: 415 DRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELF 474
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G SP TY ++ + G + E + +M+ +G+Q + Y TL+ +
Sbjct: 475 SEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKS 534
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E E +KS+ +P S ++++I + RG A F M G P+L
Sbjct: 535 GRFSDAIECLEVLKST-GFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLA 593
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L SLI +G+ +R + L + E I PD L+ + + K
Sbjct: 594 LNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEK 641
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + +G D ++ EM+ G P + TYN ++++MG +R QV
Sbjct: 450 DIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFL 509
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M GL PN TY +L+ YG++ D + +K G + + T+YN L+ A
Sbjct: 510 SKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQR 569
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++ A F M ++E P +S+I + +EA A+ M E EP++
Sbjct: 570 GLSELAVNAFRLM-TTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVT 628
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL---LNVMTQTPK 334
T+L++ + ++ V + G TPD + L L M QT K
Sbjct: 629 YTTLMKALIRVEKFQKVPAVYEEMVASGCTPDRKARAMLRSALRYMKQTLK 679
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 5/229 (2%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ +I G +G ++EE++ G++P YN LL R + +
Sbjct: 276 PSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVS 335
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G+ P+ TY+ L+ Y A E V +EM+ +Q + +++ +LA D G
Sbjct: 336 EMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKG 395
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
++F++ +DMKSS QPD ++ MI + A A F ML G P++
Sbjct: 396 EWQKSFQVLKDMKSS-GVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTW 454
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+LI C+ K+ R D + + + G +P C N+M + E+
Sbjct: 455 NTLIDCHCKSGRHDMAEELFSEMQQRGYSP----CITTYNIMINSMGEQ 499
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+K ID + + +I + AG+ + ++ G+ P T ++ +G + R +
Sbjct: 235 DKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHE 294
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +++E+ +NGL P Y +LL+ Y R +D V EM++ G++ Y+ L+
Sbjct: 295 AEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLID 354
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ A G + A + ++M++S N QP+S+ FS ++ +G+ ++ + +M +G +
Sbjct: 355 VYAHAGRWESARIVLKEMEAS-NVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQ 413
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+ +I +GK D + R+ GI PD
Sbjct: 414 PDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPD 450
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 107/228 (46%), Gaps = 3/228 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN+ FS ++ Y G + V ++MK+ GV+P+ YN ++DT G+
Sbjct: 373 EASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCL 432
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ M G+ P+ T+ +L+ + ++ + ++ EM+++G +T YN +
Sbjct: 433 DHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIM 492
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ + ++ M+S + QP+S T+++++ + G+ S+A + G
Sbjct: 493 INSMGEQQRWEQVTAFLSKMQS-QGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG 551
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
F+P + +LI Y + ++ V A + G+TP L+N
Sbjct: 552 FKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLIN 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 7/283 (2%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL--SVY 201
+TYN L+ R + + +M +G P++ Y+S+++ R+ + + +Y
Sbjct: 170 LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLY 229
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
E++ +++ L N ++ + G A F M S P T ++I
Sbjct: 230 AEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMR-FLAMAQSNGLNPKPSTLVAVILALGN 288
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ EAEA+F E+ E G EP +L++ Y + D ++ + + G+ PD++
Sbjct: 289 SGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQT 348
Query: 322 CGCLLNVMTQTPKEELGKLV-ECVEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSI 379
L++V + E ++V + +E SN + YV +L +G+++K L +
Sbjct: 349 YSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMK 408
Query: 380 SKDVK--KAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDI 420
S V+ + + N +ID N L++A E L+ + DI
Sbjct: 409 SSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDI 451
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 123/251 (49%), Gaps = 8/251 (3%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T+I G N++ EM GV P+++TY +++D + +A+ + + +
Sbjct: 225 PNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELV 284
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M NG PN TY ++ Y + ++T ++REM +G+ ++ N+ ++
Sbjct: 285 LRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCK 344
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + EA E F+ M +++ +P+ T+S ++ + G + +FN M G +
Sbjct: 345 HGKSKEAAEFFDSM-AAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQR 403
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
V +I YGK D+ + ++ E G+ PD G ++ ++ +G+L + ++
Sbjct: 404 VFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSR-----MGRLADAMD 458
Query: 346 KSNSKLGYVVK 356
K N + +K
Sbjct: 459 KFNQMIAMGLK 469
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 2/213 (0%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +S L+ Y T G F LN++ M+ G+ + +N ++D G+ + I
Sbjct: 365 PNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLI 424
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + G+ P+ TY ++ A+ R D + + +M G++ +Y++L+
Sbjct: 425 FTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCM 484
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A E+ +M S +P+ F+S+I G+V EA +F+ ++ G P++
Sbjct: 485 HGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVI 544
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI YG + + L+ + GI PD
Sbjct: 545 TFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPD 577
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 2/222 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I YG G D + ++ +M+ GV P+ TY ++ R R +
Sbjct: 401 DQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKF 460
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM-QLSVTLYNTLLAMCAD 225
+M GL P Y SL++ + + EM +G+ + ++ +N+++
Sbjct: 461 NQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCK 520
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA +IF D +PD TF+S+I GK+ +A + + M+ AG EP++
Sbjct: 521 EGRVVEAHDIF-DFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVV 579
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+LI Y + R DD + + G+ P G +L+
Sbjct: 580 SYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILH 621
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K+ G PN++TYN ++ + R + ++ EM G+ P+ TY S++ A +AR
Sbjct: 219 KSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAM 278
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ V R+M G Q + YN ++ + G E +F +M +S+ P+ T +S
Sbjct: 279 DKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREM-TSQGLMPNIVTCNS 337
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
++ GK EA F+ M G +PNL + L+ Y D++ N + G
Sbjct: 338 YMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNG 397
Query: 315 ITPDDR 320
I D R
Sbjct: 398 IVADQR 403
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 122/261 (46%), Gaps = 9/261 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+++I G ++++ + IG +P++IT+N+L+D G + + + M
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMI 570
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ +Y +L+ Y R +D L ++ EM KG++ + Y +L + G T
Sbjct: 571 SAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTV 630
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV-SEAEAMFNEMLEAGFEPNLFVLTS 289
A ++ +M S S +I CR EA AMF ++ + N+ ++ +
Sbjct: 631 GAKKMCHEMIESGTTMDIST--CGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINT 688
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECVEKSN 348
+I K ++ ++ + + G+ P+ G ++ N++ + EE + +EKS
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748
Query: 349 SK-----LGYVVKLLLEEQDI 364
L Y++++LLE+ +I
Sbjct: 749 CAPSSRLLNYIIRVLLEKGEI 769
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 103/203 (50%), Gaps = 3/203 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK++ I+P+ +++TLI Y G D L ++ EM + GVKP ITY +
Sbjct: 560 EKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGII 619
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L + R K + EM ++G + + +T +L R ++ +++++++ +
Sbjct: 620 LHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNV 679
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ ++ + NT++ V +EA E+F+ + S+ P++ T+ MI G V EA+
Sbjct: 680 KFNIAIINTMIDAMYKVRKREEAKELFDSI-SATGLVPNASTYGVMIKNLLKEGSVEEAD 738
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQ 292
MF+ M ++G P+ +L +I+
Sbjct: 739 NMFSLMEKSGCAPSSRLLNYIIR 761
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
EE + P + TYN L+D R +RP ++ GL + + LL+ A
Sbjct: 108 EEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHA 167
Query: 192 RYGEDTLSVY-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDS 249
+ +D +++ M E G++ YNT++ + + A ++ M K S C P+
Sbjct: 168 KRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNV 227
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++++I G+VS+A +F+EM++ G P++ TS+I KA+ D L +
Sbjct: 228 VTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQ 287
Query: 310 LPELGITPDDRFCGCLLN 327
+ G P+ C+++
Sbjct: 288 MISNGFQPNKVTYNCMIH 305
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA ++ P L+ Y +G V M+ G+ P++ N LL + RA
Sbjct: 37 RALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRAD 96
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + + M G+SP+ TY++L+ AY + R + V EM+E+G L+ YN
Sbjct: 97 AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYN 156
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEML 276
L+A G +EAF +DM+ PD +T+ ++I +C R + +EA+A+ +EM
Sbjct: 157 VLIAGLCRSGAVEEAFGFKKDMEDY-GLVPDGFTYGALINGLCKSR-RSNEAKALLDEMS 214
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A +PN+ V +LI + + D+ + + + G+ P+
Sbjct: 215 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN 256
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 136/277 (49%), Gaps = 4/277 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI + GN D + +EM A GV+PN ITY+NL+ + + + +
Sbjct: 218 LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRAS 277
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ K+M + P+ TY ++ + R +D + EM+ G+ +V Y+ ++
Sbjct: 278 LLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGL 337
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++A ++ E+M +++ +P+++ ++ +I+ G VS A +F++M + P+
Sbjct: 338 CQSGEPEKASDLLEEM-TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 396
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFCGCLLNVMTQTPKEELGKLVE 342
L+ SLI K R ++ + ++ E G+ P++ + G + + E +LV+
Sbjct: 397 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 456
Query: 343 CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
+ + K V+ + L E + D ++ + F S+
Sbjct: 457 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 118/249 (47%), Gaps = 2/249 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+ R D ++ +I+ + N + EM+ G+ PN+ TY+ ++ + ++ P +
Sbjct: 286 DSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEK 345
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +EMT GL PN YA L+ Y R ++ +M + + + YN+L+
Sbjct: 346 ASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIF 405
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ VG +E+ + F M+ P+ +T+S +I G + AE + ML+ G +
Sbjct: 406 GLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 464
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KL 340
PN + L++ Y K+ + V + + G+ D+R G L++ ++ + E ++
Sbjct: 465 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 524
Query: 341 VECVEKSNS 349
+ +EK+ S
Sbjct: 525 LSEIEKNGS 533
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E+S A+ ++ + PN F S LI Y G+ + + + M G+KPN + Y +L
Sbjct: 414 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 473
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L++ ++ +V + +K M D G+ + Y L+ + E V E+++ G
Sbjct: 474 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGS 533
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
V +Y++L++ ++AF I ++M S + P+ ++++I G +S A
Sbjct: 534 VPDVHVYSSLISGLCKTADREKAFGILDEM-SKKGVDPNIVCYNALIDGLCKSGDISYAR 592
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+FN +L G PN TSLI K + N + GITPD
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 641
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + +S+LI + + + +EM GV PN++ YN L+D + ++ + ++
Sbjct: 536 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 595
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ GL PN TY SL+ + + +Y EM G+ +Y+ L C+
Sbjct: 596 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 655
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A + E+M + S F++++ RGK+ E + + ++ G PN
Sbjct: 656 GDLEQAMFLIEEMFLRGHASISS--FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 713
Query: 287 LTSLIQCYGKAQRTDDV 303
+ ++I +A + +V
Sbjct: 714 IENIISGLSEAGKLSEV 730
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 115/290 (39%), Gaps = 45/290 (15%)
Query: 70 TGSSPKSYIWVNPKSPRASKLKEKSYDT------RARNEKWRIDPNAFSTLIKLYGTAGN 123
G SP Y + + + K + +DT R ++ ++ LI +G
Sbjct: 111 AGISPDVYTY---STLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
+ ++M+ G+ P+ TY L++ + +++R + K + EM+ L PN YA+
Sbjct: 168 VEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYAN 227
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD------------- 230
L+ + R ++ + +EM G+Q + Y+ L+ +G D
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287
Query: 231 ----------------------EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+AF + +M+++ P+ +T+S MI G+ +A
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENA-GISPNVYTYSIMIHGLCQSGEPEKA 346
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EM G +PN FV LI Y + +++ ++ + PD
Sbjct: 347 SDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 396
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 147 NNLLDTMGRA--KRPWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
N LL M RA P + +I++ ++D+G SP L+ Y ++ +D V
Sbjct: 15 NGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPA--VLDVLVDTYKKSGRVQDAAEVVLM 72
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCR 262
M+++G+ S+ N LL +++ E M + PD +T+S++I C R
Sbjct: 73 MRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA-GISPDVYTYSTLIEAYCKVR 131
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
+ A+ + EM E G N LI ++ ++ + + G+ PD
Sbjct: 132 -EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTY 190
Query: 323 GCLLNVMTQTPK 334
G L+N + ++ +
Sbjct: 191 GALINGLCKSRR 202
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 121/261 (46%), Gaps = 8/261 (3%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN FS +I + G D V++ M A G+KPN++ Y+ ++D + R + + + +
Sbjct: 451 PNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELL 510
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM + PN TY+S++R Y + LS + +M G + Y+ L+ +
Sbjct: 511 FREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCN 570
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG-FEPNL 284
VG + +A +++ M C PD+ ++SMI G V +F +ML G P++
Sbjct: 571 VGRSKDAMMVWKHML-GRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDV 629
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT--QTPKEELGKLVE 342
L+ +A+ + LN++ + PD C L + Q +E L LV
Sbjct: 630 ICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQKGQEFLEGLVV 689
Query: 343 --CVEKSNSKLGYVVKLLLEE 361
C K N G V+ ++L +
Sbjct: 690 RLCNRKRNKAAGEVLMVMLAK 710
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 7/221 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIY 166
AF+ ++ G+ G ++ M+ G P+ TYN LL + GRAK +
Sbjct: 350 AFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAK---AAMGVM 406
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M + P TY +++ R ED V EM+ KG+ + +++ ++ +
Sbjct: 407 RRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKL 466
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A +++ M ++ +P+ +S+MI + GK++EAE +F EM+EA PN+
Sbjct: 467 GEVDRASRVWDTMVAA-GIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMT 525
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+S+++ Y + + + + +G TP+ L+N
Sbjct: 526 YSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLIN 566
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 108 PNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+A + + L+G G + V M+ V P ++TY ++D + R R +
Sbjct: 381 PSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKV 440
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM GL PN ++ ++ + + + V+ M G++ +V LY+ ++ A
Sbjct: 441 IEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLAR 500
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA +F +M ++ C P+ T+SSM+ G S+A + + +ML G PN
Sbjct: 501 CGKMTEAELLFREMIEAK-CVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAV 559
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI R+ D + + G PD
Sbjct: 560 TYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPD 592
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTI 165
D A++++IK + +G D L ++ +M A G P++I YN LLD + RAK + +
Sbjct: 592 DTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDL 651
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+M D P+ T + LR + G++ L
Sbjct: 652 LNQMLDQACDPDTVTCNTFLREIEVGQKGQEFL 684
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R PN +S LI A + + E MKA G P++ITY L+D + +
Sbjct: 103 RKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKES 162
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + +EM D G PN TY SLL RAR D L++ R+M +G +V Y
Sbjct: 163 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 222
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
TL+ VG +A + DM PD ++ +I +V E+ A+ +
Sbjct: 223 TLIDGLCKVGRVKDACAMLADMIDKGG-TPDLMIYNMLINGLCKADQVDESIALLRRAVS 281
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +P++ +S+I ++ R D+ R L + G PD
Sbjct: 282 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 322
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 9/284 (3%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++E MK++ P+M+TYN LLD + R + + +++EM D S + ++ L+
Sbjct: 32 LFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR-SHDVISFNILVTGLC 90
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
RA E L +R+M ++ +V Y+ L+ +A E+ E MK + C PD
Sbjct: 91 RAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMK-ARGCSPDV 148
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ ++ KV+ A + EML+AG PNL SL+ +A+R D + +
Sbjct: 149 ITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 208
Query: 310 LPELGITPDDRFCGCLLNVMTQT--PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGD 367
+ G TP+ G L++ + + K+ L + ++K + + +L+
Sbjct: 209 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 268
Query: 368 FKKEATELFNSISKDVKK---AYCNCLIDLCVNLNLLENACKLL 408
+ L ++S +K Y + + LC + N L+ AC+LL
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS-NRLDEACRLL 311
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + TLI G + +M G P+++ YN L++ + +A + + +
Sbjct: 216 PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIAL 275
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ G+ P+ TY+S++ R+ ++ + +K +G V LY+TL+
Sbjct: 276 LRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCK 335
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEAF+++E M + + C D T+S++I G+V EA + M+ G P+
Sbjct: 336 AGKVDEAFDLYEVM-TGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 394
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
SLI+ D+ + + + P
Sbjct: 395 TYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 426
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RA + + D +S++I + D + +K+ G P++I Y+ L+D + +A
Sbjct: 278 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 337
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + +Y+ MT +G + TY++L+ +A ++ + M G S YN
Sbjct: 338 KVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYN 397
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEML 276
+L+ D+ + DEA E+ E+M+ S NC P + T++ +I +C S A F EM+
Sbjct: 398 SLIKGLCDLNHLDEAIELVEEMERS-NCAPSAVTYNILIHGMCRMERVDSAALDYFQEMI 456
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVR-ALNRLPELG 314
+ G P+ + L++ K++ ++ L+++ +LG
Sbjct: 457 DNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 101 NEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
N K + +P+ +++L+ + AG+ +V+ EMK G+ PN+ TY+ ++D + R+ +
Sbjct: 243 NLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQ 302
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ EM D G +PN T+ +L+R + RA E L VY +MK + YN
Sbjct: 303 ITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNF 362
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ EA ++ M + +C P++ +F+ + + V+ A MF M E
Sbjct: 363 LIETHCKDDNLGEAIKVLNSM-AKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEV 421
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +PN L++ + + D + + + E + P+
Sbjct: 422 GCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPN 461
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E + P ++ +I L G F + + MKA V+ ++T++ L+ RA +
Sbjct: 142 EGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAE 201
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ M D G + + +++++ + R + S + +K K + V +Y +L+
Sbjct: 202 AVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVH 260
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G EA +F +MK + P+ +T+S +I G+++ A +F EML+AG
Sbjct: 261 GWCRAGDISEAESVFREMKMA-GISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCN 319
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
PN +LI+ + +A RT+ V++ N++ L D L+ T + LG+ +
Sbjct: 320 PNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIE--THCKDDNLGEAI 377
Query: 342 ECVEK--------SNSKLGYVVKLLLEEQDIEG 366
+ + + S + + + + QD+ G
Sbjct: 378 KVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNG 410
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN ++D G+ K+ + M + T++ L+R Y RA + + + M+
Sbjct: 151 YNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRME 210
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+ G + ++ ++++ EA F+++K +PD ++S++ G +
Sbjct: 211 DYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLK--HKFEPDVIVYTSLVHGWCRAGDI 268
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDRFC 322
SEAE++F EM AG PN++ + +I G+ R DV + + G P+
Sbjct: 269 SEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDV---FAEMLDAGCNPNSVTF 325
Query: 323 GCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
L+ V + + E++ ++ +++ + L E + D EA ++ NS++K
Sbjct: 326 NNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAK 385
Query: 382 D 382
+
Sbjct: 386 N 386
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 93 KSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
+++D A +PN+ F+ LI+++ AG + L VY +MK + ++ITYN L+
Sbjct: 305 RAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLI 364
Query: 151 DT------MGRAKRPWQ-----------------------------VKTIYKEMTDNGLS 175
+T +G A + ++ M + G
Sbjct: 365 ETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCK 424
Query: 176 PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI 235
PN TY L+R + + + + +EM E+ ++ + Y L+A+ +G+ + A+
Sbjct: 425 PNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMF 484
Query: 236 FEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
F +M + +P + ++ G++ + E + ++M+E GF
Sbjct: 485 FREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGF 529
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +A ++++ +AG +++ ++ GV + + YN + +G+ K+ +
Sbjct: 415 RGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHD 474
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y++M +G P+ TY L+ ++GRA ++ + ++ E+++ + YN+L+
Sbjct: 475 LYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLG 534
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G+ DEA F++M + PD T+S++I KV A +F+EML G PN+
Sbjct: 535 KNGHLDEAHMKFKEM-CEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNI 593
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C ++ RT + V +L + G+ PD
Sbjct: 594 VTYNILLDCLERSGRTAEAVDLYAKLKQQGLIPD 627
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++T+ G ++YE+MK G P+ TYN L+ + GRA + + I
Sbjct: 451 VDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKI 510
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E+ D+ P+ +Y SL+ G+ + ++ ++EM EKG+ V Y+TL+
Sbjct: 511 FEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGK 570
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ A +F++M +E C P+ T++ ++ G+ +EA ++ ++ + G P+
Sbjct: 571 TDKVEMACRLFDEM-LAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLIPDSI 629
Query: 286 VLTSLIQCYGKAQR 299
+ L + + R
Sbjct: 630 TYSVLARLQSGSHR 643
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 43/273 (15%)
Query: 102 EKW--RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+KW R+ + L++ Y + N + VY EMK G ++ +N LLD + +
Sbjct: 203 KKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEV 262
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++++M P+ TY ++R G+ +++L ++ EM KG +V YNT+
Sbjct: 263 DHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTM 322
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR----------------- 262
+ A+ D+A +F M E C+P +T+S ++ + +
Sbjct: 323 IQALANARMVDKAILLFLKMVEKE-CRPSEFTYSVILHLLATERKLHKLDEVVEVSKKYM 381
Query: 263 ---------------GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
G SEA +F M + S+++C A +T + + L
Sbjct: 382 SRSIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLL 441
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
++ E G++ D VM T LGKL
Sbjct: 442 GKIHEKGVSVD--------TVMYNTVFSALGKL 466
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ LI Y + + C+ + +K G++ TY L+ R++ + +Y EM
Sbjct: 183 NILIGFYENSEDLQKCIGL---IKKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKK 239
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
G + + LL A + + V+ +MK K + Y ++ M +G DE
Sbjct: 240 KGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDE 299
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF---VLT 288
+ E+FE+M ++ P+ +++MI + V +A +F +M+E P+ F V+
Sbjct: 300 SLELFEEM-LNKGYSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVIL 358
Query: 289 SLIQCYGKAQRTDDVV 304
L+ K + D+VV
Sbjct: 359 HLLATERKLHKLDEVV 374
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D ++++LI G G+ D ++EM G+ P+++TY+ L++ G+ +
Sbjct: 519 YKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMAC 578
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ EM G PN TY LL R+ + + +Y ++K++G+ Y+ L
Sbjct: 579 RLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSVL 634
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 113/232 (48%), Gaps = 2/232 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ + F +++ Y A + +E+M G+K + YN L+DT+ ++K+ + + I
Sbjct: 197 LSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAI 256
Query: 166 YKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
YKEM G P+ TY L+ +G + ++Y+EM + G++ V Y L++
Sbjct: 257 YKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFC 316
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G DEA ++F +M++S C P + +I ++ EA F + ++GF +
Sbjct: 317 KSGKCDEAIKVFYEMEAS-GCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEV 375
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+++ Y +A + + + ++ + E I P+ R +L+ + ++ K E
Sbjct: 376 PTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFE 427
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 110/253 (43%), Gaps = 3/253 (1%)
Query: 77 YIWVNPKSPRASKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
Y W+ ++ ++K+ Y R K+ D ++ L++ +G + +Y+EM
Sbjct: 237 YNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEM 296
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
G++P+++ Y L+ ++ + + ++ EM +G P+ + Y L+ G
Sbjct: 297 IDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERL 356
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ L + + K+ G + V N ++ + AF++ ++M+ + P+S T+
Sbjct: 357 DEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECK-IGPNSRTYDV 415
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
++ K EA +F M G EP L T ++ + R D + ++ E G
Sbjct: 416 ILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERG 475
Query: 315 ITPDDRFCGCLLN 327
+ P L+N
Sbjct: 476 VLPCMHMFSALIN 488
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D A+ LI + +G D + V+ EM+A G P+ Y L++ +G +R +
Sbjct: 302 RPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALK 361
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++ +G T +++ AY RA E + EM+E + + Y+ +L
Sbjct: 362 YFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLI 421
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+EA+ +F+ M + C+P T++ M+ + G+V A ++ +M E G P +
Sbjct: 422 KSQKFEEAYNVFQRM-GMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCM 480
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ ++LI R ++ + + GI P
Sbjct: 481 HMFSALINGLCFENRLEEACVYFQEMLDKGIRP 513
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ + LI G+ D L +E+ K G + T N ++ RA + +
Sbjct: 340 PHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVD 399
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM + + PN TY +L +++ E+ +V++ M G + + Y ++ M G
Sbjct: 400 EMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNG 459
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A +++ M P FS++I ++ EA F EML+ G P +
Sbjct: 460 RVDMALNVWKQM-GERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLF 518
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++L + + R ++L + TP
Sbjct: 519 SNLKEALVEGGRISLAQEMASKLDAIRKTP 548
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 147/311 (47%), Gaps = 26/311 (8%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++T+I + G+ + +++ EM G+ P++ TYN +++ + +A+ + + I
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273
Query: 166 YKEMTDNGLSP-NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++M D G+ P NW TY SL+ Y ++ + V ++M +G+ V N+L+A
Sbjct: 274 LRQMVDKGVLPDNW-TYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLC 332
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +A ++F+ M + + + D +++ M+ + +G + + +FN ML G P+
Sbjct: 333 KHGKIKDARDVFDSM-AMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDS 391
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ LI+ Y K D N + E G+ PD ++ + + +GK+ + V
Sbjct: 392 HIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCR-----IGKMDDAV 446
Query: 345 EKSNSKLGYVV-------KLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL-CV 396
EK N + V L++ GD K + ++K ++ D+ C
Sbjct: 447 EKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRP-------DIGCF 499
Query: 397 NLNLLENACKL 407
N ++ N CKL
Sbjct: 500 NF-IINNLCKL 509
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 7/231 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ LIK Y G D ++ EM+ GV+P+++TY+ ++ + R + +
Sbjct: 390 DSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKF 449
Query: 167 KEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+M D G++P+ +TY L++ + G +D + +M KGM+ + +N ++
Sbjct: 450 NQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKD---LVLQMMNKGMRPDIGCFNFIINNL 506
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G +A IF D S P+ +++++ GK+ A +F+ M+ AG +PN
Sbjct: 507 CKLGRVMDAQNIF-DFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ V +L+ Y K R D+ + + GI P +L+ + Q +
Sbjct: 566 VVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 126/282 (44%), Gaps = 8/282 (2%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
LK K + N+ R D F+ +I G N+++ +IG+ PN++ YN L
Sbjct: 478 LKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTL 537
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D + ++ M G+ PN Y +L+ Y + ++ LS++RE+ KG+
Sbjct: 538 MDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ S TLYN +L G T A F +M S D +T+S ++ EA
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTES-GIAMDRYTYSIVLGGLFKNSCSDEAI 656
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNV 328
+F E+ + ++ L +I + +R ++ + G+ P + + N+
Sbjct: 657 LLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNL 716
Query: 329 MTQTPKEELGKLVECVEKS-----NSK-LGYVVKLLLEEQDI 364
+ + EE + +E + NS+ L +VV+ LLE+++I
Sbjct: 717 IKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREI 758
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 6/185 (3%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P + TY L+D RA RP + ++ GL + ++LLR A+ + L
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163
Query: 199 SVY-REMKEKGMQLSVTLYNTLL-AMCAD--VGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
+ M G V Y +L ++C+D G DE + + C P++ +++
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE--GGAVCLPNAVAYNT 221
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I G V++A +FNEM++ G P+L ++ KA+ D L ++ + G
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281
Query: 315 ITPDD 319
+ PD+
Sbjct: 282 VLPDN 286
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I +G D + ++ M + G++P+ +T+N L+D + R + ++
Sbjct: 414 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 473
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M G P TY ++ +YG +D + +MK +G+ +V + TL+ +
Sbjct: 474 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 533
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A E E+MKS +P S ++++I + RG +A F M G +P+L
Sbjct: 534 GRFNDAIECLEEMKSV-GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 592
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L SLI +G+ +R + L + E G+ PD L+ + + K
Sbjct: 593 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 640
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 136/305 (44%), Gaps = 13/305 (4%)
Query: 51 TQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWR---ID 107
+S +P+K Q TG S K+ V+ S A ++ + A E+ R I
Sbjct: 251 AKSGDPSKALQLLGMAQA-TGLSAKTATLVSIISALADS--GRTLEAEALFEELRQSGIK 307
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P A++ L+K Y G ++ EM+ GV P+ TY+ L+D A R + +
Sbjct: 308 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 367
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM + PN ++ LL + + T V +EMK G++ YN ++
Sbjct: 368 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 427
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNL 284
D A F+ M SE +PD T++++I C C+ G+ AE MF M G P
Sbjct: 428 FNCLDHAMTTFDRM-LSEGIEPDRVTWNTLID-CHCKHGRHIVAEEMFEAMERRGCLPCA 485
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+I YG +R DD+ R L ++ GI P+ L++V ++ + +EC+
Sbjct: 486 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR--FNDAIECL 543
Query: 345 EKSNS 349
E+ S
Sbjct: 544 EEMKS 548
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 5/227 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT-- 164
D + +S LI Y AG ++ V +EM+A V+PN ++ LL R + WQ KT
Sbjct: 344 DEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF-RDRGEWQ-KTFQ 401
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ KEM G+ P+ Y ++ +G+ + ++ + M +G++ +NTL+
Sbjct: 402 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 461
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G A E+FE M+ C P + T++ MI + + + + + +M G PN+
Sbjct: 462 KHGRHIVAEEMFEAME-RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 520
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
T+L+ YGK+ R +D + L + +G+ P L+N Q
Sbjct: 521 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ 567
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN + TL+ +YG +G F+ + EEMK++G+KP+ YN L++ + Q
Sbjct: 516 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 575
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ MT +GL P+ SL+ A+G R + +V + MKE G++ V Y TL+
Sbjct: 576 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 635
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPD 248
V + ++E+M S C+PD
Sbjct: 636 IRVDKFQKVPVVYEEMIMS-GCKPD 659
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 4/238 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E D ++TLI + G ++E M+ G P TYN ++++ G +
Sbjct: 440 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 499
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R +K + +M G+ PN T+ +L+ YG++ D + EMK G++ S T+YN
Sbjct: 500 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 559
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G +++A F M +S+ +P +S+I + +EA A+ M E
Sbjct: 560 ALINAYAQRGLSEQAVNAFRVM-TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 618
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL---LNVMTQT 332
G +P++ T+L++ + + V + G PD + L L M QT
Sbjct: 619 NGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQT 676
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 9/239 (3%)
Query: 102 EKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E + PN+F S L+ + G + V +EMK+IGVKP+ YN ++DT G+
Sbjct: 372 EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCL 431
Query: 160 WQVKTIYKEMTDNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
T + M G+ P+ WNT +GR E+ ++ M+ +G T Y
Sbjct: 432 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE---MFEAMERRGCLPCATTY 488
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N ++ D D+ + MKS + P+ T ++++ + G+ ++A EM
Sbjct: 489 NIMINSYGDQERWDDMKRLLGKMKS-QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 547
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE 335
G +P+ + +LI Y + ++ V A + G+ P L+N + ++
Sbjct: 548 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 606
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 119/267 (44%), Gaps = 7/267 (2%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT--LSVY 201
+TYN L+ R + + +M +G ++ Y+ ++++ R+ + L +Y
Sbjct: 169 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 228
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+E++ ++L V L N ++ A G +A ++ M + + T S+I+ +
Sbjct: 229 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLL-GMAQATGLSAKTATLVSIISALAD 287
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ EAEA+F E+ ++G +P +L++ Y K D ++ + + G++PD+
Sbjct: 288 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 347
Query: 322 CGCLLNVMTQTPKEELGKLV--ECVEKSNSKLGYVVKLLLEEQDIEGDFKK--EATELFN 377
L++ + E ++V E +V LL G+++K + +
Sbjct: 348 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 407
Query: 378 SISKDVKKAYCNCLIDLCVNLNLLENA 404
SI + + N +ID N L++A
Sbjct: 408 SIGVKPDRQFYNVVIDTFGKFNCLDHA 434
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 10/288 (3%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++WR P+ +++LI + AG + +N+ ++M+ + P+ TYNN+++ G A
Sbjct: 180 QEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNW 239
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + K+MT+NG+ P+ T+ +L A+ ++ + MK + N +
Sbjct: 240 KKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIV 299
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ V EA E+F M+ C PD T++S++ S G+ +A+F+ M+
Sbjct: 300 IHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAE 359
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
G PN+ +L+ Y + + L + G PD LLN ++ E
Sbjct: 360 GVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKA 419
Query: 339 KLVECVEKSNS----KLGYVVKLLLEEQDIEGDFKKEATELFNSISKD 382
+ V + N+ K+ Y L++ G KEA L + + +D
Sbjct: 420 REVFNEMRKNACKPNKVSY--NALIDAYGSAGML-KEAISLLHEMEQD 464
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++++ Y G + C V++ M A GV+PN+++YN LL + +
Sbjct: 329 DVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETF 388
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K + NG P+ +Y SLL AYGR+ E V+ EM++ + + YN L+
Sbjct: 389 KLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSA 448
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CR 262
G EA + +M+ + QPD + S+++T C CR
Sbjct: 449 GMLKEAISLLHEME-QDGIQPDVISISTLLTACGRCR 484
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++L+ YG + + V+ EM+ KPN ++YN L+D G A + ++
Sbjct: 399 DIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLL 458
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +G+ P+ + ++LL A GR R + K +G+QL+ YN+ + +
Sbjct: 459 HEMEQDGIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSL 518
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
G +A E++ M++ N +PD+ T++ +I+
Sbjct: 519 GDYKKALELYTSMRTG-NVKPDAVTYNILIS 548
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 57/316 (18%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +I G AGN+ L + ++M GV P++IT+N +L + + ++ M
Sbjct: 226 YNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMK 285
Query: 171 DNGLSPN-----------------------WN--------------TYASLLRAYGRARY 193
+ ++P+ +N TY S++ +Y
Sbjct: 286 SSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQ 345
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
E+ +V+ M +G++ ++ YN LL A G EA E F+ +K + +PD +++
Sbjct: 346 AENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQN-GFKPDIVSYT 404
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
S++ +A +FNEM + +PN +LI YG A + + L+ + +
Sbjct: 405 SLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQD 464
Query: 314 GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKS----------NSKLGYVVKLLLEEQD 363
GI PD LL + + ++ KS NS +G + L
Sbjct: 465 GIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSL------ 518
Query: 364 IEGDFKKEATELFNSI 379
GD+KK A EL+ S+
Sbjct: 519 --GDYKK-ALELYTSM 531
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
S L EK+ + K PN +++ LI YG+AG +++ EM+ G++P++I+
Sbjct: 413 SALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVIS 472
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+ LL GR ++P ++ I G+ N Y S + +Y + L +Y M+
Sbjct: 473 ISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMR 532
Query: 206 EKGMQLSVTLYNTLLAMCADVG 227
++ YN L++ +G
Sbjct: 533 TGNVKPDAVTYNILISGSCKLG 554
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 4/241 (1%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K RI+P+ F+ LI + GN D +Y++M + PN +TYN+L++ + R +
Sbjct: 234 KRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLY 293
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
K + M G PN TY +L+ + ++R ED + +++ M +G+ YNTL+
Sbjct: 294 HAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLI 353
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
VG A +IF M S PD T ++ G++ A FN+M
Sbjct: 354 HGYCQVGKLRVAKDIFSWMVSC-GVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEK 412
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGK 339
+ +I KA + ++ RLP G+ PD R + +L + P+ E +
Sbjct: 413 YLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 472
Query: 340 L 340
L
Sbjct: 473 L 473
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 139/299 (46%), Gaps = 8/299 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN ++T+I + + L ++ M+ G+ + +TYN L+ + + R
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ ++M + PN + +L+ + + + ++Y+EM + + ++ YN+L+
Sbjct: 776 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +A +F D+ S+ C PD T++++IT +V + +F EM G +
Sbjct: 836 CIQGRLGDAKHMF-DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
F +LI Y +A + + + NR+ + G+ PD LL+ + K E+ +VE
Sbjct: 895 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954
Query: 343 CVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKK----AYCNCLIDLCVN 397
++K+ + + ++ + D KEA LF S+++ K AY + LC N
Sbjct: 955 DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRN 1013
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +F+ LI + F L + +M +G +P+++T +LL+ + R + ++
Sbjct: 649 DLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLV 708
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M + GL PN Y +++ + R + L ++ M++KG+ YNTL++ +
Sbjct: 709 DSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNS 768
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A + DM P+ F+++I G + EA+ ++ EM+ PN+
Sbjct: 769 GRWTDAARLLRDM-VKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILT 827
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI + R D + + G PD
Sbjct: 828 YNSLINGFCIQGRLGDAKHMFDLMVSKGCFPD 859
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K +IDPN F+ LI + GN N+Y+EM V PN++TYN+L++ R
Sbjct: 783 KRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLG 842
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
K ++ M G P+ TY +L+ + +++ ED + ++ EM +G+ YNTL+
Sbjct: 843 DAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLI 902
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G + A ++F M PD T++ ++ GK+ +A M ++ +
Sbjct: 903 HGYCQAGKLNVAQKVFNRMVDC-GVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQM 961
Query: 281 EPNLFVLTSLIQ 292
+ ++ +IQ
Sbjct: 962 DVDIITYNIIIQ 973
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 2/233 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +F+ LI + L++ +M +G P+++T+ +LL R ++
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG-MQLSVTLYNTLLAMCAD 225
M +G PN Y +L+ + L + EM++KG + + YNTLL
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A I DM + PD +TF+++I +G + EA+ ++ +ML++ PN
Sbjct: 219 SGEWRQAARILRDM-TKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTV 277
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
SLI R + + + G P+ L+N ++ + E G
Sbjct: 278 TYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDG 330
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 12/219 (5%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVK 163
+PN ++TLI G+ + L + EM+ G + +++TYN LL + + Q
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I ++MT ++P+ T+ +L+ A+ + ++ +Y++M + + + YN+L+
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEP 282
G A + F D+ +S+ C P+ T++++I C R +V + +F M G
Sbjct: 287 CMHGRLYHAKKTF-DLMASKGCFPNVVTYNTLINGFCKSR-RVEDGMKLFQRMYREGLVG 344
Query: 283 NLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPD 318
+ F +LI Y GK + D+ + + G+TPD
Sbjct: 345 DTFTYNTLIHGYCQVGKLRVAKDI---FSWMVSCGVTPD 380
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 125/286 (43%), Gaps = 23/286 (8%)
Query: 31 DSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKL 90
D +YS T+L V L SS+ K + G++P+S + + S
Sbjct: 520 DLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSF-SGASHHHHHH 578
Query: 91 KEKSYDTRARNE-----------------KWRIDPNA--FSTLIKLYGTAGNFDGCLNVY 131
Y R R+E + R P+ F+ ++ FD + ++
Sbjct: 579 HHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLF 638
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
+M+ +G+ ++ ++ L+ R R + +M G P+ T SLL + +
Sbjct: 639 HKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQG 698
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
++ +S+ M E G++ +V +YNT++ +C + + A EIF M+ + D+
Sbjct: 699 NRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRD-LNNALEIFYGME-KKGIVADAV 756
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
T++++I+ G+ ++A + +M++ +PN+ T+LI + K
Sbjct: 757 TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 802
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ L+ ++ + ++M+ G+ ++ ++ L+ R R +I +M
Sbjct: 68 FTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMM 127
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T+ SLL + D S+ M + G + +V +YNTL+ G +
Sbjct: 128 KLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVN 187
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ +M+ D T+++++T G+ +A + +M + P++F T+L
Sbjct: 188 IALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTAL 247
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I + K D+ ++ + I P+
Sbjct: 248 IDAFVKQGNLDEAQELYKQMLQSSIGPN 275
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K++D A + PN ++TLI + + + + +++ M G+ + TYN L
Sbjct: 296 KKTFDLMASKGCF---PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTL 352
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE--DTLSVYREMKEK 207
+ + + K I+ M G++P+ T+ LL +G GE + + +M+
Sbjct: 353 IHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL--HGLCVNGEIGSAMVKFNDMRSG 410
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
L + YN ++ +EA+E+F + E +PD+ T++ MI G E
Sbjct: 411 EKYLGIVAYNIMIHGLCKADKVEEAWELFCRL-PVEGVKPDARTYTIMILGLCKNGPRRE 469
Query: 268 AEAMFNEMLEAGF 280
A+ +F M E G
Sbjct: 470 ADELFRRMKEDGI 482
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI Y AG + V+ M GV P+++TYN LLD + + + +
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMV 953
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+++ N + + TY +++ R ++ ++R + KG++L Y T+++
Sbjct: 954 EDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRN 1013
Query: 227 GYTDEAFEIFEDMK 240
G EA ++ MK
Sbjct: 1014 GLRREADKLCTRMK 1027
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D+AF +F +M S P F+ ++T + K +F++M G +L+ T
Sbjct: 597 DDAFGLFCEMLQSRPI-PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI C+ + R + L ++ +LG P G LLN Q + +E LV+ S
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVD----SM 711
Query: 349 SKLGYVVKLLLEEQDIEGDFKKE----ATELFNSISK 381
++LG +++ I G K A E+F + K
Sbjct: 712 AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK 748
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
N F+ +I Y F + M P+ +TYN +LDT+ + R + + +
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMD 268
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M GL PN NTY L+ Y + + ++ +V M + + V YN L+ + G
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+EAF++ ++M++ + PD +++++I C K+SEA + EM E G +PN
Sbjct: 329 IEEAFKLRDEMENLK-LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ Y K + DD + ++ E G +PD
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPD 417
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 86 RASKLKEKSYD--TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R KL+E +Y + AR + ID ++ TLI Y GN D L +++EMK + P+
Sbjct: 465 REKKLEE-AYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPST 523
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TYN ++ + + + Q + E+ ++GL P+ TY ++L Y R E + +
Sbjct: 524 VTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK 583
Query: 204 MKE-----------------------------------KGMQLSVTLYNTLLAMCADVGY 228
M E KG + YNTL+ G
Sbjct: 584 MVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR 643
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D+AF + +M+ E PD +T++++IT + G++ EAE ++MLE G P+
Sbjct: 644 LDDAFNLLSEMEEKE-LGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 10/266 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW--QVKT 164
D ++T++ G ++ +MK+ G+ PN TYN L+ G K W +
Sbjct: 242 DNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV--YGYCKMGWLKEAAN 299
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ + MT N L P+ TY L+ E+ + EM+ + V YNTL+ C
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ EAF++ E+M S + +P++ T + M+ GK+ +A +M E+GF P+
Sbjct: 360 EWSKISEAFKLLEEM-SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVEC 343
+LI Y KA + R ++ + + D +L + + K EE KL+
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLS- 477
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFK 369
S K GY + + I G FK
Sbjct: 478 ---SARKRGYFIDEVSYGTLIVGYFK 500
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 5/224 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PNA + ++K Y G D N +M+ G P+ +TYN L++ +A +
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
EM + + T ++LR R + E+ + +++G + Y TL+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEP 282
G D A +++++MK E P + T++ +I +C C GK +A + NE+LE+G P
Sbjct: 499 FKDGNVDRALKLWDEMKEKE-IIPSTVTYNCIIGGLCQC-GKTEQAISKLNELLESGLLP 556
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+ +++ Y + + + N++ E PD C LL
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI Y AGN +EM +K + +T N +L T+ R K+ + +
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
G + +Y +L+ Y + + L ++ EMKEK + S YN ++
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T++A ++ S PD T+++++ G V +A N+M+E F+P++F
Sbjct: 537 GKTEQAISKLNELLES-GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFT 595
Query: 287 LTSLIQ 292
L++
Sbjct: 596 CNILLR 601
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 122/240 (50%), Gaps = 5/240 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++LI+ + + +Y+EM G P+++ N +D + +A + + +
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E+ G P+ +Y+ L+ + +A + +T +Y MK++G L YNT++
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++A+++ E+MK+ + P T+ S++ + ++ EA +F E G E N
Sbjct: 493 SGKVNKAYQLLEEMKTMGH-HPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQV 551
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ +SLI +GK R D+ + + + G+TP+ CLL+ + + EE+ + + C +
Sbjct: 552 IYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKA--EEINEALVCFQ 609
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ I +G G D + EMKA G+ P+ +TY +++ + +A R + I+
Sbjct: 130 DIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIF 189
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M N P Y +++ YG A ++ S+ + KG SV YN +L
Sbjct: 190 EQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKK 249
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G TD+A IFE+MK + P+ T++ +I + G V A + + M EAG PN+
Sbjct: 250 GKTDKALRIFEEMK--RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRT 307
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FC 322
+ +I KAQ+ D+ + +PD FC
Sbjct: 308 INIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFC 344
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+++ +D A++T+I + +G + + EEMK +G P ++TY +++D + + R
Sbjct: 472 KDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRL 531
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++E NG+ N Y+SL+ +G+ ++ V EM +KG+ +V +N L
Sbjct: 532 DEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCL 591
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEA 278
L +EA F+ MK + C P+ T+ +I +C R K ++A + EM +
Sbjct: 592 LDGLVKAEEINEALVCFQSMKDLK-CTPNQITYCILINGLCKVR-KFNKAFVFWQEMQKQ 649
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +PN T++I K+ R G PD
Sbjct: 650 GLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPD 689
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ ++ + +TLI+++ G D L++ +EMK+ +++ YN +D G+ +
Sbjct: 92 YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM NGL P+ TY S++ +A ++ + ++ +M++ YNT++
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGY 211
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G DEA+ + E + ++ C P ++ ++T +GK +A +F EM PN
Sbjct: 212 GSAGKFDEAYSLLERQR-AKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PN 269
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L +I KA + + + + E G+ P+ R +++ + + K
Sbjct: 270 LPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQK 320
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 124/292 (42%), Gaps = 18/292 (6%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
++ + M+ +P Y L+ + ++ ++ +M + G N + +L+R
Sbjct: 46 FDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRV 105
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R + LS+ EMK + LYN + VG D A++ F +MK++ P
Sbjct: 106 FSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKAN-GLVP 164
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T++SM+ + ++ EA +F +M + P + ++I YG A + D+ L
Sbjct: 165 DDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLL 224
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLVECVEKSNS----KLGYVVKLLLEEQ 362
R G P C+L + + K + ++ E +++ ++ +L +
Sbjct: 225 ERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAG 284
Query: 363 DIEGDFK-----KEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
++E FK KEA LF ++ N +ID L+ AC + E
Sbjct: 285 NVEAAFKVRDAMKEAG-LFPNVRT------INIMIDRLCKAQKLDEACSIFE 329
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 6/245 (2%)
Query: 70 TGSSPKSYIWVN--PKSPRASKLKEKSYD--TRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
G P +Y V ++ KL E ++D R+ K+R +A++TLI G D
Sbjct: 20 AGFGPTNYTCVELVASCVKSRKLIE-AFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESD 78
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
L ++ +M+ +G + N+ L+ R R ++ EM N + Y +
Sbjct: 79 RMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCI 138
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
+G+ + + EMK G+ Y +++ + DEA EIFE M+ +
Sbjct: 139 DCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQV 198
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
P ++ +++MI GK EA ++ G P++ ++ C GK +TD +R
Sbjct: 199 -PCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALR 257
Query: 306 ALNRL 310
+
Sbjct: 258 IFEEM 262
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A++ ++ +S+LI +G G D V EEM G+ PN+ T+N LLD + +A+
Sbjct: 541 AKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEE 600
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M D +PN TY L+ + R ++EM+++G++ + Y
Sbjct: 601 INEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTA 660
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+++ A G +A +FE ++S PDS ++++MI S + +A +F E
Sbjct: 661 MISGLAKSGNVAQASSLFERFRASGGI-PDSASYNAMIEGLSIANRALDAYQLFEETRLK 719
Query: 279 GFEPNLFVLTSLIQCYGKAQ 298
G + +L+ KA+
Sbjct: 720 GCSIHTKTCVALLDALHKAE 739
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ +I + AGN + V + MK G+ PN+ T N ++D + +A++ + +I
Sbjct: 268 PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSI 327
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++ M SP+ T+ SL+ G+ +D +Y M + +V +Y +L+
Sbjct: 328 FEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFK 387
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++ +++++M S C PD ++ + G+ + A+F E+ GF P+
Sbjct: 388 CDRKEDGHKMYKEMMRS-GCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ LI KA + + + G D R
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTR 481
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
NFD + EM G P T L+ + ++++ + + + M P ++ Y
Sbjct: 6 NFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+L+ A + L+++ +M+E G +++V L TL+ + + G D A + ++MKS+
Sbjct: 66 TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSN 125
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
D ++ I GKV A F+EM G P+ TS++ KA R D+
Sbjct: 126 -TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDE 184
Query: 303 VVRALNRLPE 312
V ++ +
Sbjct: 185 AVEIFEQMEQ 194
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 4/236 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +++ + G + C +EEM GV ++ +Y+ +D ++ +PW+ +Y
Sbjct: 317 DVKIYNIILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLY 376
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM G+ + Y +++RA G + + ++ V+REMKE G + +V YNT++ + +
Sbjct: 377 KEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCEN 436
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA+ +F+ M+ + P+ T+ C K + F+ M+ +G P +
Sbjct: 437 GRIREAYGVFDQMR-EKGYAPNVITYHCFF---GCIEKPKQILRTFDRMINSGVRPRMDT 492
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
L++ +G+ V ++ E G +PD L++ + Q +L + E
Sbjct: 493 YVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYE 548
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+D A++T+I+ G + D + V+ EMK +G +PN++TYN ++ + R +
Sbjct: 385 RLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYG 444
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M + G +PN TY +G + L + M G++ + Y L+
Sbjct: 445 VFDQMREKGYAPNVITYHCF---FGCIEKPKQILRTFDRMINSGVRPRMDTYVMLMKKFG 501
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G+ F +++ M+ + C PD+ ++++I +G V A EML G
Sbjct: 502 RWGFLRPVFIVWKKME-EQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGL 556
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK-PNMITYNNLLDTMGRAKRPWQVKTIYK 167
+ ++ +I + G FD + + MKA V PN +T+ + A + Y
Sbjct: 213 DTYNGMIDILGKFFEFDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAAAHLVEEAMNAYY 272
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY-REMKEKGMQLSVTLYNTLLAMCADV 226
+ L +Y++L+ A ++ + ++ +E K+ V +YN +L +
Sbjct: 273 RTEEFNLRDE-TSYSNLIDALCEYKHVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKM 331
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ + E +E+M C+ +++S + I GK A ++ EM + G ++
Sbjct: 332 GWWKKCREFWEEMDRRGVCK-SLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVA 390
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I+ G ++ D +R + E+G P+
Sbjct: 391 YNTVIRAIGLSEGVDFSIRVFREMKEVGCEPN 422
>gi|356508382|ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Glycine max]
Length = 854
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 4/248 (1%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
A+KL + Y E W D ++ ++ A D +++EM G P+ IT+
Sbjct: 595 ATKLADLYYKISKSREDW--DQELYNCVLNCCAQALPVDELSRLFDEMVQHGFAPSTITF 652
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N +LD G+AK +V +Y GL + TY +++ AYG+ + + S ++M+
Sbjct: 653 NVMLDVFGKAKLFNKVWRLYCMAKKQGLV-DVITYNTIIAAYGKNKDFNNMSSTVQKMEF 711
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G +S+ YN++L G + + + MK S NC D +T++++I I +G ++
Sbjct: 712 DGFSVSLEAYNSMLDAYGKDGQMETFRSVLQKMKDS-NCASDHYTYNTLINIYGEQGWIN 770
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
E + E+ E G P+L +LI+ YG A + V + + + GI PD + L+
Sbjct: 771 EVANVLTELKECGLRPDLCSYNTLIKAYGIAGMVAEAVGLIKEMRKNGIEPDKKSYTNLI 830
Query: 327 NVMTQTPK 334
+ + K
Sbjct: 831 TALRRNDK 838
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 101 NEKWR----------IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
N+ WR +D ++T+I YG +F+ + ++M+ G ++ YN++L
Sbjct: 666 NKVWRLYCMAKKQGLVDVITYNTIIAAYGKNKDFNNMSSTVQKMEFDGFSVSLEAYNSML 725
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
D G+ + +++ ++M D+ + + TY +L+ YG + + +V E+KE G++
Sbjct: 726 DAYGKDGQMETFRSVLQKMKDSNCASDHYTYNTLINIYGEQGWINEVANVLTELKECGLR 785
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ YNTL+ G EA + ++M+ + +PD +++++IT K EA
Sbjct: 786 PDLCSYNTLIKAYGIAGMVAEAVGLIKEMRKN-GIEPDKKSYTNLITALRRNDKFLEA 842
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 8/215 (3%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
TLIKL G+ +G + + ++M G I LL RA + +V + K
Sbjct: 374 TLIKLEANYGDDEGAVGILDDMVDCGCHYASII-GTLLHVYERAAKVHKVPRLLKGSFYQ 432
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
+ N ++ ++L+ AY + R ED L V + K + + LY+ L+ C + G ++A
Sbjct: 433 HVLVNQSSCSTLVMAYVKHRLVEDALKVLNDKKWQDPRYEDNLYHLLICSCKEAGLLEDA 492
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
+I+ M S++ P+ +MI I S G +AE ++ ++ +G ++ + +++
Sbjct: 493 VKIYSRMPKSDD-NPNMHIACTMIDIYSVMGLFKDAEVLYLKLKSSGVALDMIAFSIVVR 551
Query: 293 CYGKAQRTDD---VVRALNRLPELGITPDDRFCGC 324
Y KA D V+ A++ P+ I P D+F C
Sbjct: 552 MYVKAGALKDACAVLDAIDMRPD--IVP-DKFLLC 583
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 119/308 (38%), Gaps = 41/308 (13%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN L+ LY N + + M+ + Y++++ R + + +
Sbjct: 190 VVPNVATIGMLMGLYRKGWNLEEAEFAFSRMRGFRIVCES-AYSSMITIYTRLRLYEKAE 248
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ + M + + PN + +L AY + D V M+E G ++ +NT++
Sbjct: 249 GVIELMRKDEVVPNLENWLVMLNAYSQQGKLGDAERVLEAMQEAGFSDNIVAFNTMITGF 308
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP- 282
D A +F + PD T+ SMI A + E+ + GF+P
Sbjct: 309 GKARRMDAAQRLFMRITRCLEVDPDETTYRSMIEGWGRADNYEYATRYYKELKQMGFKPS 368
Query: 283 --NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
NLF L L YG + +GI D CGC + +G L
Sbjct: 369 SSNLFTLIKLEANYGDDEGA------------VGILDDMVDCGCHYASI-------IGTL 409
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNL 400
+ E++ +K+ V +LL +G F + V ++ C+ L+ V L
Sbjct: 410 LHVYERA-AKVHKVPRLL------KGSFYQHVL---------VNQSSCSTLVMAYVKHRL 453
Query: 401 LENACKLL 408
+E+A K+L
Sbjct: 454 VEDALKVL 461
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/176 (18%), Positives = 66/176 (37%), Gaps = 35/176 (19%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
IY M + +PN + +++ Y +D +Y ++K G+ L + ++ ++ M
Sbjct: 495 IYSRMPKSDDNPNMHIACTMIDIYSVMGLFKDAEVLYLKLKSSGVALDMIAFSIVVRMYV 554
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI-------------------------- 258
G +A + + + + PD + M+ I
Sbjct: 555 KAGALKDACAVLDAIDMRPDIVPDKFLLCDMLRIYQRCNMATKLADLYYKISKSREDWDQ 614
Query: 259 ---------CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
C+ V E +F+EM++ GF P+ ++ +GKA+ + V R
Sbjct: 615 ELYNCVLNCCAQALPVDELSRLFDEMVQHGFAPSTITFNVMLDVFGKAKLFNKVWR 670
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 6/158 (3%)
Query: 163 KTIYKEMTDNGLSPNWNTY---ASLLRAYGRARYGEDTLSVYREMKEKG-MQLSVTLYNT 218
K + D SP +T A L R A + TLS + M+ G ++ + YN
Sbjct: 71 KLFFSRDADVDFSPELSTEHCNAILKRLEASAAAADKTLSFFERMRATGKLERNAAAYNV 130
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+L + + A ++ +MK SE ++ F+++I C + V F ML+
Sbjct: 131 MLRFLSRRQDWEGAEKLIYEMKGSELISCNA--FNTLIYACCKQSLVQLGTKWFRMMLDC 188
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G PN+ + L+ Y K ++ A +R+ I
Sbjct: 189 GVVPNVATIGMLMGLYRKGWNLEEAEFAFSRMRGFRIV 226
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + + + ++ LI LYG G L V+ EM + KPN+ TY L++ R
Sbjct: 257 RMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREG 316
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + ++++M + GL P+ +Y +L+ AY RA + ++ M+ G + YN
Sbjct: 317 LCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYN 376
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G+ ++A +FEDMK P + +++ S G VS+ E + N+M +
Sbjct: 377 ILVDAYGRAGFLNDAEAVFEDMKRV-GITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 435
Query: 278 AGFEPNLFVLTSLIQCYGK 296
+G + + FVL S++ YG+
Sbjct: 436 SGLKLDTFVLNSMLNLYGR 454
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R PN ++ LIK Y +G + V+ EMK G+ + + YN+ ++ + + P +
Sbjct: 192 RCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKA 251
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ I+ M +G P+ TY L+ YG+ L V+ EM + ++ Y L+
Sbjct: 252 EEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNA 311
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
A G ++A E+FE M+ + +PD +++++++ S G A +F+ M G EP
Sbjct: 312 FAREGLCEKAEEVFEQMQEA-GLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP 370
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ L+ YG+A +D + +GITP + LL+ ++T
Sbjct: 371 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKT 420
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 9/227 (3%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
GN + ++ MK G KP+ TY L++ G+ + + ++ EM + PN T
Sbjct: 245 GGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICT 304
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y +L+ A+ R E V+ +M+E G++ V YN L+ + G+ A EIF M+
Sbjct: 305 YTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQ 364
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL---FVLTSLIQCYGKA 297
C+PD +++ ++ G +++AEA+F +M G P + VL S G
Sbjct: 365 HM-GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 423
Query: 298 QRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ +D+ LN++ + G+ D +LN+ + + GK+ E +
Sbjct: 424 SKCEDI---LNQMCKSGLKLDTFVLNSMLNLYGRLG--QFGKMEEVL 465
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
K ++I YN L+D G+ + ++ Y ++ + PN +TYA L++AY + E +
Sbjct: 159 KQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEA 218
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
V+ EMK G+ S +YN+ + G ++A EIF MK + C+P + T++ +I +
Sbjct: 219 VFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMK-RDGCKPSTETYTMLINLY 277
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GK A +FNEML +PN+ T+L+ + + + ++ E G+ PD
Sbjct: 278 GKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPD 336
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L EK+ + + ++ ++P+ +S L++ Y AG G ++ M+ +G +P+ +YN
Sbjct: 317 LCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYN 376
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
L+D GRA + ++++M G++P ++ LL A+ + + +M +
Sbjct: 377 ILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKS 436
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
G++L + N++L + +G + E+ M++ +C+ D T++ +I G + +
Sbjct: 437 GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENG-SCEADISTYNILINRYGQAGFIDK 495
Query: 268 AEAMF 272
E +F
Sbjct: 496 MEGLF 500
>gi|414591640|tpg|DAA42211.1| TPA: hypothetical protein ZEAMMB73_215753 [Zea mays]
Length = 299
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + TL+ Y G D L+++ EM G+KP+ I Y+ ++D + +A R K
Sbjct: 50 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 109
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EMT++G++ + TY +LR + R ++ + +++E++ +++++ NT++
Sbjct: 110 VKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 169
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++F + S P T+S MIT G V EAE MF+ M AG EPN
Sbjct: 170 FQTRRVEEAKDLFASISRSR-LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 228
Query: 284 LFVLTSLIQCYGKAQRTDDVVRA 306
+L +++ + + +++VRA
Sbjct: 229 SRLLNHVVR---ELLKKNEIVRA 248
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
N+++ +G+ P+ + Y+ L+D + + ++ M G+ PN Y +L+ Y
Sbjct: 5 NIFDLKVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 64
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ ++ LS++REM ++G++ S LY+ ++ G T A F +M S D
Sbjct: 65 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTES-GIAMD 123
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
T++ ++ EA +F E+ + N+ L ++I + +R ++
Sbjct: 124 ICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 177
>gi|18422700|ref|NP_568665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635755|sp|Q56XR6.2|PP421_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46680
gi|332008030|gb|AED95413.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 468
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 122/233 (52%), Gaps = 7/233 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLIK Y D V M+ G++P++ TYN+L+ + +V ++
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR-ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM +GLSP+ +Y +L+ Y + R+GE ++ ++ G+ + YN LL
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G+TD A E+F+ +KS +P+ T++ +I +C R +V + M E+ ++G+ PN
Sbjct: 167 SGHTDNAIELFKHLKS--RVKPELMTYNILINGLCKSR-RVGSVDWMMRELKKSGYTPNA 223
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC-LLNVMTQTPKEE 336
T++++ Y K +R + ++ ++ + G T D F C +++ + +T + E
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG-FANCAVVSALIKTGRAE 275
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L+ +G+ D + +++ +K+ VKP ++TYN L++ + +++R V + +E
Sbjct: 155 DTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRE 213
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ +G +PN TY ++L+ Y + + E L ++ +MK++G +++ G
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+EA+E ++ S D ++++++ + G + + + E+ G +P+ + T
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ T + L + E+G+ P C CL++
Sbjct: 334 IIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLID 372
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 126/259 (48%), Gaps = 8/259 (3%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
A K+ EK D+ R + +++LIK + G + +Y++M P++
Sbjct: 466 AYKIYEKMLDSDCRT-----NSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLL 520
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N +D M +A P + + +++E+ P+ +Y+ L+ +A + +T ++ MKE
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+G L YN ++ G ++A+++ E+MK ++ +P T+ S+I + ++
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK-TKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
EA +F E E N+ + +SLI +GK R D+ L L + G+TP+ LL
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLL 699
Query: 327 NVMTQTPKEELGKLVECVE 345
+ + + EE+ + + C +
Sbjct: 700 DALVKA--EEINEALVCFQ 716
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ I +G G D + E++A G+KP+ +TY +++ + +A R + ++
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + N P Y +++ YG A ++ S+ + KG SV YN +L +
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA +FE+MK ++ P+ T++ +I + GK+ A + + M +AG PN+
Sbjct: 357 GKVDEALRVFEEMK--KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRT 414
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFC 322
+ ++ K+Q+ D+ ++ TPD+ FC
Sbjct: 415 VNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFC 451
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 3/214 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D A++ +I + G + + EEMK G +P ++TY +++D + + R + +
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E + N Y+SL+ +G+ ++ + E+ +KG+ +V +N+LL
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVK 704
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+EA F+ MK + C P+ T+ +I +C R K ++A + EM + G +P+
Sbjct: 705 AEEINEALVCFQSMKELK-CTPNQVTYGILINGLCKVR-KFNKAFVFWQEMQKQGMKPST 762
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T++I KA + +R G PD
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A++++ ++ +S+LI +G G D + EE+ G+ PN+ T+N+LLD + +A+
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEE 707
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M + +PN TY L+ + R ++EM+++GM+ S Y T
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+++ A G EA +F+ K++ PDS +++MI S + +A ++F E
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 279 GFE 281
G
Sbjct: 827 GLH 829
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P ++++L+ + NFD + EM G P++ T ++ + +A + + + +
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQ 157
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M P ++ Y +L+ A+ + + L+++++M+E G + +V L+ TL+ A G
Sbjct: 158 NMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A + ++MKSS + D ++ I GKV A F+E+ G +P+
Sbjct: 218 RVDSALSLLDEMKSS-SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 288 TSLIQCYGKAQRTDDVVRALNRL 310
TS+I KA R D+ V L
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHL 299
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDP--NAFSTLIKLYGTAGNFDGCL 128
G S + I + +A+KL+E +D K++ P +A++TLI + + D L
Sbjct: 130 GPSVNTCIEMVLSCVKANKLRE-GFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++++M+ +G +P + + L+ + R ++ EM + L + Y + ++
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ + + E++ G++ Y +++ + DEA E+FE ++ + P
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PC 307
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
++ +++MI GK EA ++ G P++ ++ C K + D+ +R
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFE 367
Query: 309 RL 310
+
Sbjct: 368 EM 369
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ ++ G D L V+EEMK PN+ TYN L+D + RA + + M
Sbjct: 345 AYNCILTCLRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSM 403
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
GL PN T ++ +++ ++ +++ +M K + +L+ VG
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D+A++I+E M S+ C+ +S ++S+I G+ + ++ +M+ P+L +L +
Sbjct: 464 DDAYKIYEKMLDSD-CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNT 522
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ C KA + + PD R
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKSRRFVPDAR 553
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
+Y SLL R R + + EM G SV ++ C E F++ ++M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAM---FNEMLEAGFEPNLFVLTSLIQCYGK 296
+ + +P FS+ T+ V+ ++ M F +M E G+EP + + T+LI+ + K
Sbjct: 160 RKFK-FRP---AFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 297 AQRTDDVVRALNRLPELGITPD 318
R D + L+ + + D
Sbjct: 216 EGRVDSALSLLDEMKSSSLDAD 237
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 9/159 (5%)
Query: 69 KTGSSPKSYIW--VNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNF 124
+ G +P Y W + +A ++ E ++ E + PN + LI F
Sbjct: 685 QKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE-LKCTPNQVTYGILINGLCKVRKF 743
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+ ++EM+ G+KP+ I+Y ++ + +A + ++ NG P+ Y ++
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLS----VTLYNTL 219
+ D S++ E + +G+ + V L +TL
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842
>gi|255661208|gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 115/224 (51%), Gaps = 7/224 (3%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN +++TL+++YG A F ++++ M+ ++ N++TYN ++ G+ +
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKAN 239
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM + G+ PN TY++++ +G+ + ++++++ G+++ LY T++
Sbjct: 240 NLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAY 299
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G A + ++K +PD+ + I I + G++ EA +F + ++AG +
Sbjct: 300 ERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKD 354
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ V +I + K ++ +VV ++ LG D +LN
Sbjct: 355 ITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFSDSNVISLVLN 398
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YNT++ +
Sbjct: 173 WSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M + +P++ T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 233 LEHEKANNLIQEM-HNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G+KP+++ YN++++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM + G+ P+ +Y++LL Y + + LSV+ EM+E
Sbjct: 103 SEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ ++ + + T
Sbjct: 163 DMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKDIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++M+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVEID 288
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G+ P+ Y S++ +G+A+ + S+ EM+E G+ Y+TLL M +
Sbjct: 68 SRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + EA+ +F M + G EPN+
Sbjct: 128 QKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ +D LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K + +PD ++SMI + EA ++ +EM EAG P+ ++L
Sbjct: 62 KAISIFSRLKRA-GIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + Q+ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 117/226 (51%), Gaps = 1/226 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D + Y EM + PN++TY++++ + +A+ + +
Sbjct: 203 DVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVL 262
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ P+ TY+S+L Y + ++ + +M+ G++ +V Y +L+
Sbjct: 263 NTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKN 322
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A +IF+ M + +PD T+ +++ + +G + E A+ + M+ G +P+ V
Sbjct: 323 GRCTKARKIFDSM-TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 381
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI Y K ++ D + +++ + G+ P+ G +++V+ ++
Sbjct: 382 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 427
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+Y T RI PN +S++I A D + V M GV P+ +TY+++
Sbjct: 221 DKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSI 280
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L + +P + +M +G+ PN TY SL+ + ++ M ++G+
Sbjct: 281 LHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGL 340
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ + Y TLL A G E + D+ QPD F+ +I + + KV +A
Sbjct: 341 EPDIATYRTLLQGYATKGALVEMHALL-DLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 399
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F++M + G PN+ ++I K+ DD + ++ + G+TP+
Sbjct: 400 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPN 448
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L++ + + G P++++Y +++ + + + Y EM +SPN TY+S++ A
Sbjct: 189 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAA 248
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+A+ + + V M + G+ Y+++L G E M+S + +P
Sbjct: 249 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRS-DGVEP 307
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T+ S++ G+ ++A +F+ M + G EP++ +L+Q Y ++ L
Sbjct: 308 NVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ + GI PD L+ + K + LV
Sbjct: 368 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 401
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
P+ T S +Y+ N + +A K+ +D+ + D + TL++ Y T G
Sbjct: 307 PNVVTYRSLMNYLCKNGRCTKARKI----FDSMTK-RGLEPDIATYRTLLQGYATKGALV 361
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + M G++P+ +N L+ + ++ Q ++ +M +GL+PN Y +++
Sbjct: 362 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 421
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
++ +D + + +M ++G+ ++ L
Sbjct: 422 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIL 451
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y G +G + + +MK+ +KP+ ITYN L++ + +A+R + + EM
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT 229
DNG++P T+ +L+ AYGR E V EM+E G++ +V Y +++ A C + G
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN-GKI 311
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA I +DM ++ P++ ++++I G +A + +M G P++
Sbjct: 312 PEAVAILDDM-FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 370
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI+ + + +N L + PD
Sbjct: 371 LIKGLCNQSQISEAEEIINSLSNHRLIPD 399
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI YG G + C V EM+ G+KPN+++Y ++++ + + + I +M
Sbjct: 263 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 322
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ PN Y +++ AY + + +MK G+ S+ YN L+ +
Sbjct: 323 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 382
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA EI + S+ PD+ +++++I+ C RG + +A + M + G + + L
Sbjct: 383 EAEEIINSL-SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 441
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
I G A R +++ ++ + + P + + N+M +
Sbjct: 442 ISGLGGAGRLNEMEYLYQKMMQNNVVPSN----AIHNIMVEA 479
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 38/264 (14%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T+I + G+ + + ++M G+KPN ITYN LL + RA R + +
Sbjct: 48 PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 107
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL-------------- 211
EM + P+ TY+ L R + LS++ + + G+ +
Sbjct: 108 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 167
Query: 212 ---------------------SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ +YNTL+ G + AF F MK S + +PD
Sbjct: 168 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK-SRHIKPDHI 226
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++++I +++ A+ + EM + G P + +LI YG+ + + L+ +
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286
Query: 311 PELGITPDDRFCGCLLNVMTQTPK 334
E G+ P+ G ++N + K
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGK 310
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E ++ T + + I P+ ++ LI A ++ EM+ GV P + T+N L
Sbjct: 207 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 266
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D GR + + + EM +NGL PN +Y S++ A+ + + +++ +M K +
Sbjct: 267 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 326
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +YN ++ + G D+AF + E MKS+ P T++ +I + ++SEAE
Sbjct: 327 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN-GISPSIVTYNLLIKGLCNQSQISEAE 385
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ N + P+ +LI D + R+ + GI
Sbjct: 386 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 3/229 (1%)
Query: 108 PNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNAFS + + G AG + V++EM V PN ITYN ++D + +
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+M +GL PN TY LL RA +T ++ EM + M Y+ L +
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + +F + D +T S ++ GKVS AE + ++ AG P
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGD-YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ +LI Y + + ++ I PD L+N + + +
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N + D +++TLI GN D L++ + M G+K + TY+ L+ +G A R
Sbjct: 393 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 452
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYREMKEK 207
+++ +Y++M N + P+ + ++ AY ++YG + + + +EM +K
Sbjct: 453 EMEYLYQKMMQNNVVPSNAIHNIMVEAY--SKYGNEIKAEDLRKEMLQK 499
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 111/203 (54%), Gaps = 6/203 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + TL+ Y G D L+++ EM G+KP+ I Y+ ++D + +A R K
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EMT++G++ + TY +LR + R ++ + +++E++ +++++ NT++
Sbjct: 638 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++F + S P+ T+S MIT G V EAE MF+ M AG EPN
Sbjct: 698 FQTRRVEEAKDLFASISRSR-LVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 756
Query: 284 LFVLTSLIQCYGKAQRTDDVVRA 306
+L +++ + + +++VRA
Sbjct: 757 SRLLNHVVR---ELLKKNEIVRA 776
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 108/213 (50%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN A++T+I + G+ + ++++EM G+ P+++TYN+++ + +A+ + +
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M + + PN TY +L+ Y ++ + V++EM+ + V + L+
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++F+ M + + PD ++++ M+ + +G + + +F+ ML G P+ +
Sbjct: 350 YGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 408
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI+ Y D + N + + G+ PD
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 441
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 47/271 (17%)
Query: 88 SKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCL----NVYEEMKAIGVKP 141
K+KE +DT A + +P+ FS I L G A GCL ++++ M G+ P
Sbjct: 351 GKIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATK--GCLVDMTDLFDLMLGDGIAP 405
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+ T+N L+ + I+ EM D+G+ P+ TY +++ A R +D + +
Sbjct: 406 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 465
Query: 202 REMKEK-----------------------------------GMQLSVTLYNTLLAMCADV 226
+M ++ GM L + +++++ +
Sbjct: 466 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 525
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A IF D+ + PD+ +S ++ GK+ +A +F+ M+ AG EPN+ V
Sbjct: 526 GRVMDAQNIF-DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+L+ Y K R D+ + + + GI P
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 615
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 131/303 (43%), Gaps = 10/303 (3%)
Query: 71 GSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G +P Y + + S LK K + N +D FS++I G
Sbjct: 472 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 531
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
N+++ +G+ P+ + Y+ L+D + + ++ M G+ PN Y +L+
Sbjct: 532 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 591
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + ++ LS++REM ++G++ S LY+ ++ G T A F +M S
Sbjct: 592 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTES-GIAM 650
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T++ ++ EA +F E+ + N+ L ++I + +R ++
Sbjct: 651 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 710
Query: 308 NRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVECVEKS----NSK-LGYVVKLLLEE 361
+ + P+ + + N++ + EE + ++ + NS+ L +VV+ LL++
Sbjct: 711 ASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKK 770
Query: 362 QDI 364
+I
Sbjct: 771 NEI 773
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
LSP +TYA L+ RA E L+ + ++ G+++++ + N LL + TDEA
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF--EPNLFVLTSLI 291
+I C PD +++S ++ +GK +A+ + M E G PN+ ++I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
+ K + + + GI PD
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPD 266
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P TY L+D RA RP + ++ GL N LL + A+ ++ L
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 199 SVY-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMI 256
+ E G V Y+ LL D G + +A ++ M + C P+ ++++I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G V++A +F EM++ G P+L S++ KA+ D L ++ +
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299
Query: 317 PDD 319
P++
Sbjct: 300 PNN 302
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT-DNGLSPNWNTYASLLR 186
L + ++ G++ N+I N+LL+ AKR + I T + G P+ +Y+ LL+
Sbjct: 144 LAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLK 203
Query: 187 AY---GRARYGEDTLSVYREMKEKGMQLS--VTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ G++ +D L R M E G S V YNT++ G ++A ++F++M
Sbjct: 204 SLCDQGKSGQADDLL---RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM-V 259
Query: 242 SENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
PD T++S++ +C R + +AEA +M+ PN + +LI Y +
Sbjct: 260 QRGIPPDLVTYNSVVHALCKARA-MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 318
Query: 301 DDVVRALNRLPELGITPD 318
+ VR + I PD
Sbjct: 319 KEAVRVFKEMRRHSILPD 336
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 2/200 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V++EM+ +KP+ +TY L+ G A + ++K+M DN L PN TY L+ A
Sbjct: 723 VFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACV 782
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ E + V+ MK G+QL+ ++ TL+ A D+A E+++ MK + +P++
Sbjct: 783 KNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNN 842
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLE--AGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
TF+S+I C + +A +F EM + + +P+L +++I+ + + + + L
Sbjct: 843 VTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQALIML 902
Query: 308 NRLPELGITPDDRFCGCLLN 327
N + + I D+ LL+
Sbjct: 903 NDMEKNNIMADEVLYNSLLD 922
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 9/275 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+ LIK YG+A D V+++MK + PN +TY L+D + + + +++ M
Sbjct: 739 YGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMK 798
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK-EKGMQLSVTLYNTLLAMCADVGYT 229
+G+ N + +L++ + ++ + L VY+ MK + ++ + +N+L+ C
Sbjct: 799 RDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSI 858
Query: 230 DEAFEIFEDMKSS-ENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVL 287
+A EIFE+MK + +PD T+S+MI CR K + +A M N+M + + +
Sbjct: 859 KKAMEIFEEMKQPISHTKPDLITYSTMIK-GFCREKNIQQALIMLNDMEKNNIMADEVLY 917
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT---PKEELGKLVECV 344
SL+ KA + ++ + L I P + L+ + + PK LG L E +
Sbjct: 918 NSLLDGCCKANEIEMALKVYKNMEILKIKPSNVTYSILIKIYGKQRNLPK-ALGVLEE-M 975
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
+K + G +V L + I+ K A +LF+ +
Sbjct: 976 KKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDM 1010
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 110/223 (49%), Gaps = 9/223 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F+TLIK + + D L VY+ MK +KPN +T+N+L+D R + I++EM
Sbjct: 809 FTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEM 868
Query: 170 TD--NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
+ P+ TY+++++ + R + + L + +M++ + LYN+LL C
Sbjct: 869 KQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKAN 928
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+ A +++++M+ + +P + T+S +I I + + +A + EM + G P L V
Sbjct: 929 EIEMALKVYKNMEILK-IKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVY 987
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDD-----RFCGCL 325
T L+Q K+++ + + + GI D GCL
Sbjct: 988 TCLLQTCIKSRQLKTAEQLFHDMRIQGIRGDQLTYQTMINGCL 1030
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 153/365 (41%), Gaps = 52/365 (14%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR---PW 160
R D +F+T+IK ++ MK +KPN +TYN+L+D R R W
Sbjct: 580 MRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAW 639
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
Q + EM N + P+ TY++L++ ++ +S M L
Sbjct: 640 Q---LLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGIS-------NPMDL--------- 680
Query: 221 AMCADVGYTDEAFEIFEDMKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
++AF + E MK S +PD ++ +I C V+ A A+F EM +
Sbjct: 681 ---------EKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSN 731
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELG 338
+P+ LI+ YG A + D+ ++ + + P+ GCL++ + + E
Sbjct: 732 IKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAM 791
Query: 339 KLVECVEKSNSKLGYVVKLLLEEQDIEG---DFK-KEATELFNSISKDVK----KAYCNC 390
++ E +++ +L ++ L I+G FK +A E++ + D K N
Sbjct: 792 EVFETMKRDGVQLNTIIFTTL----IKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNS 847
Query: 391 LIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSP--TQWSLHLKSLSLGAALTALHIWI 448
LID C+ N ++ A ++ E E+ I P +S +K + I +
Sbjct: 848 LIDCCIRCNSIKKAMEIFE-----EMKQPISHTKPDLITYSTMIKGFCREKNIQQALIML 902
Query: 449 NDLSK 453
ND+ K
Sbjct: 903 NDMEK 907
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 110/291 (37%), Gaps = 77/291 (26%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D FS +IK Y A LNV MK G+KP+ + YN+++D + + + +
Sbjct: 364 MDMMTFSCMIKGYCRAQRLPQALNVLSIMKERGIKPDEVLYNSIIDGCSKNNQIAKAFLL 423
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM---------------- 209
Y EM G++P T+ SL+ R+ + V +MKEK +
Sbjct: 424 YDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKS 483
Query: 210 ---------------QLSVT--------LYNTLLAMCADVGYTDEAFEIFEDMK------ 240
QL + L+N LL C + D A E+F+ +K
Sbjct: 484 ENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELFKQLKPQSQPQ 543
Query: 241 --------------------SSENC------------QPDSWTFSSMITICSCRGKVSEA 268
S++N +PD +F+++I C+ K+ A
Sbjct: 544 IQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFNTIIKGCAQEKKLQLA 603
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
MFN M +PN SLI + R + + L+ + + I PD+
Sbjct: 604 FEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDN 654
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 123/317 (38%), Gaps = 76/317 (23%)
Query: 105 RIDPNAFSTL---IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY----NNLLDTMGRAK 157
R D A STL +K Y L + +++ N TY N +LD++ +A+
Sbjct: 282 RTDFLASSTLKIFVKYYSRLNQTQTALQYFHQLQQTSQAQNDPTYYQTVNQMLDSLLKAE 341
Query: 158 RPWQVKTIY-KEMTDNGLSPN---WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ + IY K T + PN T++ +++ Y RA+ L+V MKE+G++
Sbjct: 342 LFEEAEQIYNKVFTLSKDQPNCMDMMTFSCMIKGYCRAQRLPQALNVLSIMKERGIK--- 398
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
PD ++S+I CS ++++A +++
Sbjct: 399 ---------------------------------PDEVLYNSIIDGCSKNNQIAKAFLLYD 425
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN-VMTQT 332
EML G P SLI C ++ D R L ++ E + PD+ L + ++
Sbjct: 426 EMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSEN 485
Query: 333 PKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLI 392
+++L K +L + DF + LF N L+
Sbjct: 486 QRQDLEKAF---------------VLYNQLQNSNDFTPDEI-LF------------NVLL 517
Query: 393 DLCVNLNLLENACKLLE 409
D C+N L+ A +L +
Sbjct: 518 DACINCKQLDRAVELFK 534
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E +I P+ +S LIK+YG N L V EEMK G++P +I Y LL T ++++
Sbjct: 941 EILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQL 1000
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +M G+ + TY +++ ++ + L + ++ + +QL L +
Sbjct: 1001 KTAEQLFHDMRIQGIRGDQLTYQTMINGCLYSQKFDSILILLKDASDSKVQLPHELSQNI 1060
Query: 220 L 220
L
Sbjct: 1061 L 1061
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + TL+ Y G D L+++ EM G+KP+ I Y+ ++D + +A R K
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EMT++G++ + TY +LR + R ++ + +++E++ +++++ NT++
Sbjct: 625 VKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++F + S P T+S MIT G V EAE MF+ M AG EPN
Sbjct: 685 FQTRRVEEAKDLFASISRSR-LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 743
Query: 284 LFVLTSLIQCYGKAQRTDDVVRA 306
+L +++ + + +++VRA
Sbjct: 744 SRLLNHVVR---ELLKKNEIVRA 763
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 108/213 (50%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN A++T+I + G+ + ++++EM G+ P+++TYN+++ + +A+ + +
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M + + PN TY +L+ Y ++ + V++EM+ + V + L+
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++F+ M + + PD ++++ M+ + +G + + +F+ ML G P+ +
Sbjct: 337 YGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 395
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI+ Y D + N + + G+ PD
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 47/271 (17%)
Query: 88 SKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCL----NVYEEMKAIGVKP 141
K+KE +DT A + +P+ FS I L G A GCL ++++ M G+ P
Sbjct: 338 GKIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATK--GCLVDMTDLFDLMLGDGIAP 392
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+ T+N L+ + I+ EM D+G+ P+ TY +++ A R +D + +
Sbjct: 393 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452
Query: 202 REMKEK-----------------------------------GMQLSVTLYNTLLAMCADV 226
+M ++ GM L + +++++ +
Sbjct: 453 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 512
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A IF D+ + PD+ +S ++ GK+ +A +F+ M+ AG EPN+ V
Sbjct: 513 GRVMDAQNIF-DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+L+ Y K R D+ + + + GI P
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 602
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 4/235 (1%)
Query: 71 GSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G +P Y + + S LK K + N +D FS++I G
Sbjct: 459 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 518
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
N+++ +G+ P+ + Y+ L+D + + ++ M G+ PN Y +L+
Sbjct: 519 QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 578
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + ++ LS++REM ++G++ S LY+ ++ G T A F +M S
Sbjct: 579 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTES-GIAM 637
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
D T++ ++ EA +F E+ + N+ L ++I + +R ++
Sbjct: 638 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 692
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
LSP +TYA L+ RA E L+ + ++ G+++++ + N LL + TDEA
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF--EPNLFVLTSLI 291
+I C PD +++S ++ +GK +A+ + M E G PN+ ++I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
+ K + + + GI PD
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPD 253
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P TY L+D RA RP + ++ GL N LL + A+ ++ L
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 199 SVY-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMI 256
+ E G V Y+ LL D G + +A ++ M + C P+ ++++I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G V++A +F EM++ G P+L S++ KA+ D L ++ +
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286
Query: 317 PDD 319
P++
Sbjct: 287 PNN 289
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT-DNGLSPNWNTYASLLR 186
L + ++ G++ N+I N+LL+ AKR + I T + G P+ +Y+ LL+
Sbjct: 131 LAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLK 190
Query: 187 AY---GRARYGEDTLSVYREMKEKGMQLS--VTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ G++ +D L R M E G S V YNT++ G ++A ++F++M
Sbjct: 191 SLCDQGKSGQADDLL---RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM-V 246
Query: 242 SENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
PD T++S++ +C R + +AEA +M+ PN + +LI Y +
Sbjct: 247 QRGIPPDLVTYNSVVHALCKARA-MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 305
Query: 301 DDVVRALNRLPELGITPD 318
+ VR + I PD
Sbjct: 306 KEAVRVFKEMRRHSILPD 323
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y G +G + + +MK+ +KP+ ITYN L++ + +A+R + + EM
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT 229
DNG++P T+ +L+ AYGR E V EM+E G++ +V Y +++ A C + G
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN-GKI 359
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA I +DM ++ P++ ++++I G +A + +M G P++
Sbjct: 360 PEAVAILDDM-FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 418
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI+ + + +N L + PD
Sbjct: 419 LIKGLCNQSQISEAEEIINSLSNHRLIPD 447
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI YG G + C V EM+ G+KPN+++Y ++++ + + + I +M
Sbjct: 311 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 370
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ PN Y +++ AY + + +MK G+ S+ YN L+ +
Sbjct: 371 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 430
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA EI + S+ PD+ +++++I+ C RG + +A + M + G + + L
Sbjct: 431 EAEEIINSL-SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQL 489
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
I G A R +++ ++ + + P + + N+M +
Sbjct: 490 ISGLGGAGRLNEMEYLYQKMMQNNVVPSN----AIHNIMVEA 527
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 38/264 (14%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T+I + G+ + + ++M G+KPN ITYN LL + RA R + +
Sbjct: 96 PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 155
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL-------------- 211
EM + P+ TY+ L R + LS++ + + G+ +
Sbjct: 156 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 215
Query: 212 ---------------------SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ +YNTL+ G + AF F MK S + +PD
Sbjct: 216 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK-SRHIKPDHI 274
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++++I +++ A+ + EM + G P + +LI YG+ + + L+ +
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334
Query: 311 PELGITPDDRFCGCLLNVMTQTPK 334
E G+ P+ G ++N + K
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGK 358
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E ++ T + + I P+ ++ LI A ++ EM+ GV P + T+N L
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 314
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D GR + + + EM +NGL PN +Y S++ A+ + + +++ +M K +
Sbjct: 315 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 374
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +YN ++ + G D+AF + E MKS+ P T++ +I + ++SEAE
Sbjct: 375 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN-GISPSIVTYNLLIKGLCNQSQISEAE 433
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ N + P+ +LI D + R+ + GI
Sbjct: 434 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 37/266 (13%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP-NMITYNNLLDTMGRAKRPWQVK 163
R D A++ ++ AG+ + + M G P N +YN ++ M RA R
Sbjct: 24 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 83
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EMT+ + PN TY +++ + + E + +M G++ + YN LL+
Sbjct: 84 EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGL 143
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM------------------------ITI- 258
G E + ++M +S+ PD +T+S + +TI
Sbjct: 144 CRAGRMGETSALLDEM-ASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 202
Query: 259 ---CS------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
CS C+ GKVS AE + ++ AG P + +LI Y + +
Sbjct: 203 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 262
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPK 334
++ I PD L+N + + +
Sbjct: 263 QMKSRHIKPDHITYNALINGLCKAER 288
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N + D +++TLI GN D L++ + M G+K + TY+ L+ +G A R
Sbjct: 441 NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLN 500
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYREMKEK 207
+++ +Y++M N + P+ + ++ AY ++YG + + + +EM +K
Sbjct: 501 EMEYLYQKMMQNNVVPSNAIHNIMVEAY--SKYGNEIKAEDLRKEMLQK 547
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 10/320 (3%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ + ++ Y A FD V EM+ V P+++T+N ++D RA +
Sbjct: 93 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 152
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M GL P TY S+L+ R+ + V++EM + G+ V + L+
Sbjct: 153 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 212
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG +EA +I+++M+ +PD +FS +I + + RGK+ A A EM G P+
Sbjct: 213 VGEIEEALKIYKEMR-HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVEC 343
+ T +I + +A D +R + + G PD LLN + + + + G L E
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLEN 403
E+ L+ IEG K A +LF+++ + D+ L++
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDK-ALQLFDTMLNQRLRP------DIVTYNTLIDG 384
Query: 404 ACKLLELGLTLEVYTDIQSR 423
C+ +L +++ D+ SR
Sbjct: 385 MCRQGDLDKANDLWDDMHSR 404
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I + AG L V +EM G P+++TYN LL+ + + +R + +
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
EM + G+ P+ T+ +L+ Y + L ++ M + ++ + YNTL+ MC
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++++DM S E P+ T+S +I +G+V +A +EM+ G PN+
Sbjct: 389 -GDLDKANDLWDDMHSRE-IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+I+ Y ++ + L ++ ++PD
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N++ R D ++TLI G+ D +++++M + + PN +TY+ L+D+ +
Sbjct: 368 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 427
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
EM + G+ PN TY S+++ Y R+ ++M + + YNTL+
Sbjct: 428 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 487
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+AF++ +M E QPD T++ +I S G V EA +F +M G
Sbjct: 488 HGYIKEDKMHDAFKLL-NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 546
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
EP+ + S+I + A + + + + + + G R G + V Q E L ++
Sbjct: 547 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG-KEKRRAAGTVQFVNIQNSAESLKQM 605
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 14/322 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ + ++ Y + FD V EM+ V P+++T+N L+D RA +
Sbjct: 155 VNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIAL 214
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + GL P T+ S+L+ + R + V+R M + + V +N L+
Sbjct: 215 VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCR 274
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG +EA + +++M+ PD +FS +I + S RGK+ A A EM G P+
Sbjct: 275 VGEVEEAMKFYKEMQ-QRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGV 333
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK----EELGKLV 341
+ T +I + +A + +R + + LG PD LLN + + + EEL L
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEEL--LN 391
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLL 401
E E+ + L+ +G+F+K A +LF+++ + D+ +L+
Sbjct: 392 EMKERGVTPDLCTFTTLIHGYCRDGNFEK-ALQLFDTLLHQRLRP------DVVAYNSLI 444
Query: 402 ENACKLLELGLTLEVYTDIQSR 423
+ C+ +L E++ D+ +R
Sbjct: 445 DGMCRKGDLAKANELWDDMHAR 466
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I + AG+ L V +EM +G P+++TYN LL+ + + R + +
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + G++P+ T+ +L+ Y R E L ++ + + ++ V YN+L+
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRK 450
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E+++DM + E P+ T+S +I +G+V EA +EM+ G PN+
Sbjct: 451 GDLAKANELWDDMHARE-IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMT 509
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+I+ Y ++ + L ++ + I PD
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 11/226 (4%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+++ R D A+++LI G+ ++++M A + PN +TY+ L+D+ +
Sbjct: 430 HQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVE 489
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ EM G PN TY S+++ Y R+ + ++M + + + +NTL+
Sbjct: 490 EAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLI 549
Query: 221 AMCADVGYTDE-----AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
GY E AF +F M+ E QPD+ T++ +I S +G + EA +F +M
Sbjct: 550 H-----GYIKEENMHGAFNVFNIMEK-EMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKM 603
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
+G EP+ + SLI + A + + + + + G PDD+F
Sbjct: 604 GASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDKF 649
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 9/196 (4%)
Query: 96 DTRARNEKW------RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
D NE W I PN +S LI + G + +EM + G PN++TYN
Sbjct: 452 DLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYN 511
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
+++ R+ + + ++M + + P+ T+ +L+ Y + +V+ M+++
Sbjct: 512 SIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKE 571
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
+Q YN ++ ++ G +EA +F+ M +S +PD +T+ S+I G E
Sbjct: 572 MVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS-GIEPDRYTYMSLINGHVTAGNSKE 630
Query: 268 AEAMFNEMLEAGFEPN 283
A + +EM+ GF P+
Sbjct: 631 AFQLHDEMMHRGFAPD 646
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI Y GNF+ L +++ + ++P+++ YN+L+D M R + ++ +M
Sbjct: 405 FTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ PN TY+ L+ ++ E+ EM KG ++ YN+++ G
Sbjct: 465 AREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVK 524
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+ + + M +N PD TF+++I + A +FN M + +P+ +
Sbjct: 525 KGQQFLQKMMQ-DNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMI 583
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I + + ++ R ++ GI PD
Sbjct: 584 INGFSEQGNMEEAGRVFKKMGASGIEPD 611
>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Brachypodium distachyon]
Length = 620
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
RIDPN +ST+I + G ++ MK GV+PN+ TYN L+ + + +
Sbjct: 190 RIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRT 249
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
T+Y+E+ +GL PN +L+ + A D + + EM G+ +V +YN+L+
Sbjct: 250 LTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDG 309
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
GY EA +++DM C PD +T S ++ C G+V A M ++G
Sbjct: 310 AFRSGYAQEALTVYQDMTRVGLC-PDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINL 368
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE--LGKL 340
N +LI + K + + R+ E+GI P+ L++ ++ K E +G
Sbjct: 369 NAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIY 428
Query: 341 VECVEKS 347
+E V K
Sbjct: 429 MEMVAKG 435
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA +TLI + A N + EM G+ P + YN+L+D R+ + T+
Sbjct: 263 PNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTV 322
Query: 166 YKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-A 221
Y++MT GL P+ T + ++R G+ + L + M++ G+ L+ YN L+
Sbjct: 323 YQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLEL---MQQSGINLNAAAYNALIDE 379
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
C D G EA M +P+ T+SS+I S + K+ A ++ EM+ G E
Sbjct: 380 HCKD-GNLAEALATCTRMNEV-GIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVE 437
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ T++I + K D R + E GI+ +
Sbjct: 438 PNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSN 474
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
L+ G D L+V+ + + P + N +LD + +A+R +V ++ EM
Sbjct: 96 LGVLVIALSQMGLHDDALSVFCRLPTL---PALPACNAILDGLVKARRFDRVWKLFDEML 152
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ TY +L+ A V+ +M + + +V Y+T++ + + G
Sbjct: 153 SRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVI 212
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA +F MK + QP+ +T++++++ R V+ ++ E+L++G PN ++T+L
Sbjct: 213 EAERLFIMMKET-GVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTL 271
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITP 317
I + A R DV A + GI P
Sbjct: 272 IGGFFLANRISDVKNAFLEMHRYGIAP 298
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ A++ LI + GN L M +G++PN++TY++L+D + ++ I
Sbjct: 368 LNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGI 427
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
Y EM G+ PN TY +++ +G A++G + +++EM EKG+ + + L+ +
Sbjct: 428 YMEMVAKGVEPNVLTYTAMI--HGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGL 485
Query: 223 CADVGYTDEAFEIFE---------------DMKSSENCQP-DSWTFSSMITICSCRGKVS 266
C + D I + + + E+C +S T+ ++I G+
Sbjct: 486 CRESRVQDAVMFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYH 545
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLI--QC 293
EA F+ M E+ P+ F + LI QC
Sbjct: 546 EAGKFFSCMRESDMVPDSFTYSLLIRGQC 574
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
++L +AR + ++ EM +GM S+ YNTL+ C G +A+E++ M +
Sbjct: 130 AILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQM-VA 188
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
P+ T+S+MI + G V EAE +F M E G +PNL+ +L+ + K D
Sbjct: 189 RRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCK---RDG 245
Query: 303 VVRALNRLPEL---GITPD 318
V R L EL G+ P+
Sbjct: 246 VNRTLTLYQELLKSGLVPN 264
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 97 TRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
T R + I+PN +S+LI + + + +Y EM A GV+PN++TY ++
Sbjct: 392 TCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHA 451
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ---- 210
+ ++KEM + G+S N T + L+ R +D +V MK G +
Sbjct: 452 KFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQD--AVMFIMKYAGQKKPGD 509
Query: 211 ----------------LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
L+ Y TL+ G EA + F M+ S+ PDS+T+S
Sbjct: 510 INSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMV-PDSFTYSL 568
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+I G V A ++ +M++ G +P +
Sbjct: 569 LIRGQCMLGYVLNAMMLYADMVKIGVKPRRY 599
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ ++ ++ R+ P S L+ + G DG +++M G KP + TYN +
Sbjct: 80 EEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIM 139
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D M + +++EM GL P+ TY S++ YG+ +DT+ + EMK
Sbjct: 140 IDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSC 199
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ V YNTL+ G + E F +MK S +P+ ++S+++ + +A
Sbjct: 200 EPDVITYNTLINCFCKFGKLPKGLEFFREMKQS-GLKPNVVSYSTLVDAFCKEDMMQQAL 258
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ +M G PN TSL+ Y K D R + + ++G+
Sbjct: 259 KFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 97/235 (41%), Gaps = 36/235 (15%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + G L + EMK G+KPN+++Y+ L+D + Q Y
Sbjct: 202 DVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFY 261
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M GL PN +TY SL+ AY + D + EM + G++ +V Y L+ DV
Sbjct: 262 VDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDV 321
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA E +F +M+ AG PNL
Sbjct: 322 ERIKEA------------------------------------EELFGKMVTAGVIPNLAS 345
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
T+LI + KA+ D + L+ + GI PD G + + K E K+V
Sbjct: 346 YTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV 400
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 3/212 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F L + F+ L + +MK V P + N LL R + +K +K+M
Sbjct: 65 VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P TY ++ + E ++ EMK +G+ YN+++ VG
Sbjct: 125 IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLT 288
D+ FE+MKS +C+PD T++++I C C+ GK+ + F EM ++G +PN+ +
Sbjct: 185 DDTVYFFEEMKSM-SCEPDVITYNTLIN-CFCKFGKLPKGLEFFREMKQSGLKPNVVSYS 242
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+L+ + K ++ + LG+ P++
Sbjct: 243 TLVDAFCKEDMMQQALKFYVDMRRLGLVPNEH 274
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 108/221 (48%), Gaps = 8/221 (3%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++ LI + A N D L + +EMK G+KP+++ Y + ++ ++ K
Sbjct: 339 VIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAK 398
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM + G+ N Y +L+ AY ++ + L + EM E ++++ + L+
Sbjct: 399 VVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGL 458
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+A + F + + Q ++ +++MI +V A +F +M + G P+
Sbjct: 459 CKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPD 518
Query: 284 LFVLTSLIQCYGKAQRTDDVVRAL---NRLPELGITPDDRF 321
TSLI GK ++ +VV+AL +++ E+G+ RF
Sbjct: 519 RTAYTSLID--GKLKQ-GNVVQALALRDKMAEIGVESGARF 556
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 3/150 (2%)
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
T N P + + +L E+ L + +MK + N LL A +G T
Sbjct: 55 TRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKT 114
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLT 288
D F+DM + +P +T++ MI C C+ G + A +F EM G P+
Sbjct: 115 DGMKRFFKDMIGA-GSKPTVFTYNIMID-CMCKEGDIEAASGLFEEMKFRGLIPDTVTYN 172
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+I YGK R DD V + + PD
Sbjct: 173 SMIDGYGKVGRLDDTVYFFEEMKSMSCEPD 202
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + F+ Y G D ++++ +M+ G+ PN++ Y L+D + + R + +
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKF 367
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + G++PN + SL+ E + EM ++G+ + +NTL+ +V
Sbjct: 368 NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 427
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E + D+ +PD+++++ +I+ G+ EAE +F+ M+ G P
Sbjct: 428 GRVMEGRRLI-DLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVT 486
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+L+ Y A R DD + G+TP +L+ + QT +
Sbjct: 487 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 534
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 13/269 (4%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PNA F+TLI G + + M+ +GV+P+ +Y L+ A R + +
Sbjct: 410 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAE 469
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M GLSP TY +LL Y A +D ++REM KG+ V YNT+L
Sbjct: 470 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 529
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
EA E++ +M +S + D +T++ ++ V EA MF + G + N
Sbjct: 530 FQTKRFSEAKELYLNMINSGT-KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 588
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD---RFCGCLLNVMTQTPKEELGKL 340
+ T +I K R +D + +P G+ P+ R N++ + EE L
Sbjct: 589 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVA--ENLIEEGSLEEFDSL 646
Query: 341 VECVEKSNSK-----LGYVVKLLLEEQDI 364
+EK+ + L +V+ LL DI
Sbjct: 647 FSAMEKNGTAPNSQMLNALVRRLLHRGDI 675
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN++TY ++D + +A+ + + ++++M DNG+ PN +TY L+ Y ++ + +
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQM 264
Query: 201 YREMKEKGMQLSVTLYNTLLA-MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
+M +G++ Y +LL +CA F D+ PD F+ +
Sbjct: 265 LEKMSARGLKPDCYTYGSLLNYLCA-----LSEMHSFLDLMVENGLSPDHHIFNIFFSAY 319
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ G + +A +FN+M + G PN+ +LI K R DD N++ G+TP+
Sbjct: 320 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 378
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 110/236 (46%), Gaps = 10/236 (4%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVY-EEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
WR++ + L+K ++V + M +G P+ ++Y+ LL R +
Sbjct: 129 WRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEA 188
Query: 163 KTIYKEMT-DNGLS--PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + M D+G S PN TY +++ +A+ + V+++M + G++ + YN L
Sbjct: 189 LELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCL 248
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEA 278
+ +G E ++ E M S+ +PD +T+ S++ +C+ +SE + + M+E
Sbjct: 249 IHGYLSIGKWKEVVQMLEKM-SARGLKPDCYTYGSLLNYLCA----LSEMHSFLDLMVEN 303
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
G P+ + Y K D + N++ + G++P+ G L++ + + +
Sbjct: 304 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 359
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 35/246 (14%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---------- 153
+ PN ++ LI Y + G + + + E+M A G+KP+ TY +LL+ +
Sbjct: 238 VKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFL 297
Query: 154 ----------------------GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
+ + I+ +M +GLSPN Y +L+ A +
Sbjct: 298 DLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKL 357
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+D + +M +G+ ++ ++N+L+ V + A E+ +M C P++
Sbjct: 358 GRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC-PNAVF 416
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
F+++I G+V E + + M G P+ F T LI Y A RTD+ + + +
Sbjct: 417 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMV 476
Query: 312 ELGITP 317
+G++P
Sbjct: 477 SIGLSP 482
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA-RYG 194
+I V PN TY+ L+ + R R + + G N LL+ R G
Sbjct: 91 SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG 150
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS--SENCQPDSWTF 252
E + + M E G Y+ LL + +EA E+ M + +C P+ T+
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210
Query: 253 SSMITICSCRGKV-SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++I C+ ++ AE +F +M++ G +PN LI Y + +VV+ L ++
Sbjct: 211 TTVID-GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMS 269
Query: 312 ELGITPDDRFCGCLLNVM 329
G+ PD G LLN +
Sbjct: 270 ARGLKPDCYTYGSLLNYL 287
>gi|224080562|ref|XP_002306163.1| predicted protein [Populus trichocarpa]
gi|222849127|gb|EEE86674.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ L+ + T+ N G V + KA+G+K + Y L+ T ++ + + ++ EM
Sbjct: 45 FNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMV 104
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ PN +TY +L+ RA Y M+ K ++ ++N L+ C G D
Sbjct: 105 NAGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVD 164
Query: 231 EAFEIFEDMKS-SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
AF++ +M ++ PD T ++I C+ G+V A+ ++N + + + V T
Sbjct: 165 RAFDVLAEMTGEAQPIDPDHITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTI 224
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLVECVEKSN 348
I + + + + + G+ PD+ F L++V K + ++++ +
Sbjct: 225 AINSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAKAKG 284
Query: 349 SKLGYV 354
++LG +
Sbjct: 285 AQLGII 290
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 9/236 (3%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+ + D ++TLI +G D V+ EM GV+PN+ TY L+D RA +
Sbjct: 68 AKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQ 127
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS---VTL 215
+ Y M + P+ + +L+ A G++ + V EM + + +T+
Sbjct: 128 VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQPIDPDHITV 187
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
L+ C + G D A E++ +M N + ++ I CS G A +F++M
Sbjct: 188 -GALIKACTNAGQVDRAQEVY-NMVHKYNIKGTPEVYTIAINSCSQIGDWEFACKVFDDM 245
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDD----VVRALNRLPELGITPDDRFCGCLLN 327
G P+ L++LI G A + D + A + +LGI P G N
Sbjct: 246 TRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQEAKAKGAQLGIIPYSSLMGACCN 301
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+P +T+ L+ ++ V + K G++ LY TL++ CA G D FE
Sbjct: 39 NPTLSTFNMLMSVCATSQNSAGAFEVLQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFE 98
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+F +M ++ +P+ T+ ++I C+ G+V++A + M +P+ V +LI
Sbjct: 99 VFHEMVNA-GVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 157
Query: 295 GKAQRTDDVVRALNRLPELG-----ITPDDRFCGCLLNVMT 330
G++ D RA + L E+ I PD G L+ T
Sbjct: 158 GQSGAVD---RAFDVLAEMTGEAQPIDPDHITVGALIKACT 195
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P ++ I G+++ V+++M GV P+ + + L+D G A + I +
Sbjct: 219 PEVYTIAINSCSQIGDWEFACKVFDDMTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQ 278
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
E G Y+SL+ A A+ + L +Y ++K ++ +V N L+ D
Sbjct: 279 EAKAKGAQLGIIPYSSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATMNALITALCDGD 338
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+A E+ +MK + +P++ T+ S++++ S R EA M
Sbjct: 339 QLPKALEVLSEMK-AWGLRPNTITY-SILSVASERKDDLEAGLML 381
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 96 DTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
+ +A+ + I P +S+L+ A N+ L +YE++K++ +KP + T N L+ +
Sbjct: 279 EAKAKGAQLGIIP--YSSLMGACCNAKNWQKGLELYEDIKSMKIKPTVATMNALITALCD 336
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ + + EM GL PN TY+ L A R E L + + K+ + ++ +
Sbjct: 337 GDQLPKALEVLSEMKAWGLRPNTITYSILSVASERKDDLEAGLMLLSQAKKDCVAPTLIM 396
Query: 216 YNTLLAMC 223
+++MC
Sbjct: 397 SKCIISMC 404
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 12/238 (5%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +S+LI + AG + L ++EEM + P++ +N L+D G+ ++ +
Sbjct: 454 VKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAF 513
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-KGMQLSVTLYNTLLAM 222
IY M + P+ T+ +L+ A G+A+ L +M E G+ YN L+
Sbjct: 514 EIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDA 573
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C G +A+E+FE+M++ + +P + TF+++I S ++ + + + ML+ G P
Sbjct: 574 CGKSGDFTKAYEVFEEMRT-KGIRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEGLNP 632
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+ + + +LI + Q L + +LG+ PD NV T + +GKL
Sbjct: 633 DAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPD--------NVTFNTFIDAVGKL 682
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 8/243 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + + L +++EMK VKPN Y++L+ RA + I+
Sbjct: 422 DVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIF 481
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EMT + P+ + +L+ +G+ R + +Y M++ +Q +N L++
Sbjct: 482 EEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKA 541
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+ A E DM PD +++++I C G ++A +F EM G P
Sbjct: 542 KNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVT 601
Query: 287 LTSLIQCYGKAQRTDDVV---RALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC 343
+LI YG A R+ D+ + ++ + + G+ PD L++ + +++L E
Sbjct: 602 FNALI--YG-ASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACNR--RQDLSTAFEV 656
Query: 344 VEK 346
+EK
Sbjct: 657 LEK 659
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 9/220 (4%)
Query: 106 IDPNA--FSTLIKLYGTA-----GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
I PN ++ +IK+ G +++ EM G P+++TY L+D +
Sbjct: 379 IAPNTVTYNAVIKIVSRCKRNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRME 438
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
P + +++EM + + PN Y+SL+ A+ RA Y E L+++ EM + + V +N
Sbjct: 439 PERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNA 498
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRGKVSEAEAMFNEMLE 277
L+ + D+AFEI++ M+ + QPD TF+++I+ + + EAM +
Sbjct: 499 LIDGFGKLRQVDKAFEIYDRMRKLQ-IQPDRITFNALISASGKAKNSIRALEAMGDMTEI 557
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P+ +LI GK+ + GI P
Sbjct: 558 YGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRP 597
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 10/233 (4%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNN 148
+K+++ R K +I P+ F+ LI G A N L +M I G+ P+ +YN
Sbjct: 510 DKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNA 569
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L+D G++ + +++EM G+ P T+ +L+ R+ + + M ++G
Sbjct: 570 LIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEG 629
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ NTL++ C AFE+ E K PD+ TF++ I GK+ +
Sbjct: 630 LNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQL-GVHPDNVTFNTFIDAV---GKLDSS 685
Query: 269 EAMF---NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
E MF +EM G P+ L +++ C G+ + D + R + E + PD
Sbjct: 686 EKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEKRLEPD 738
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 1/235 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++ LI G +G+F V+EEM+ G++P +T+N L+ R+ I
Sbjct: 563 DRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIV 622
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M GL+P+ T +L+ A R + V + K+ G+ +NT + +
Sbjct: 623 DLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKL 682
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+++ FE+ +M+S P T ++++ C RGK+ E F+ E EP+
Sbjct: 683 DSSEKMFELLSEMES-RGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEKRLEPDSVT 741
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ LI+ Y D V A + + + LL + + + E+ KL+
Sbjct: 742 FSLLIENYVSHHLLDKAVIAYHNCKRQQLELNSNVVMHLLESLIRKDEIEVAKLI 796
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 17/232 (7%)
Query: 94 SYDTR-ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
SYD R RN + +D L+K G CL+++ M + VK ++ +++ +
Sbjct: 271 SYDDRQTRNWNYTMD-----ALLK----GGKARECLDMFLSMPSNEVKRDVASWSIYITA 321
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-KGMQL 211
+GR +R + + M + + PN TY++L+ G+ LS +R M +
Sbjct: 322 LGRLERYSEAERSLIWMREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAP 381
Query: 212 SVTLYNTLLAMCA-----DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+ YN ++ + + D G A + +M +++ C PD T++++I S R +
Sbjct: 382 NTVTYNAVIKIVSRCKRNDCGGITRAMSLLREM-ATKGCIPDVVTYATLIDAFSKRMEPE 440
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A +F EM EA +PN + +SLI + +A + + + I PD
Sbjct: 441 RALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPD 492
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 3/251 (1%)
Query: 71 GSSPKSYIWVNPKSPRASKLK-EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGC 127
G P +I+ + S SK + E++Y P+ +++LI L + G
Sbjct: 533 GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEA 592
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+V++ M G P+ +TY ++ + I + M +G+ P+ Y SL+
Sbjct: 593 RHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 652
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + + VY M G++ + +N L+ G TD AF +F++M + P
Sbjct: 653 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPP 712
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+++ +I G+VSEA + F EM++ G P TSLI KA R + + +
Sbjct: 713 TLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV 772
Query: 308 NRLPELGITPD 318
+ +LG+ PD
Sbjct: 773 EDMVKLGVNPD 783
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + A D + + M G +P +TY +++ + + K +
Sbjct: 467 DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVI 526
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + G P + SLL Y E+ V EM +G V LY +L+ +
Sbjct: 527 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +F+ M + C PD+ T+ ++I S G V A + M ++G P+ F
Sbjct: 587 GRVPEARHVFDSM-IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 645
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ Y K +R D +R+ GI P+
Sbjct: 646 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 677
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 119/258 (46%), Gaps = 6/258 (2%)
Query: 82 PKSPRASKLKEKSYDTRARNEK-----WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKA 136
P + + + + YD + E +D +++T+IK + D ++E++K
Sbjct: 332 PNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKT 391
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
G PN++ Y ++D + +A R +++M+ + P TY ++ +A+ D
Sbjct: 392 AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPD 451
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
V+ +M +KG Y TL+ + DEA ++ D+ ++ +P + T+ S++
Sbjct: 452 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL-DVMLTKGPEPTAVTYGSIV 510
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
++EA+ + +M E G EP LF+ TSL+ Y R ++ + L + G
Sbjct: 511 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 570
Query: 317 PDDRFCGCLLNVMTQTPK 334
PD L++++ T +
Sbjct: 571 PDVILYTSLIDLLFSTGR 588
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 37/247 (14%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ D + P+ + I L G A D + ++ EM ++G +P +++YN +
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA---------------RYG 194
+ + + + + M DNG P+ + +L+ + +A R+
Sbjct: 62 ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121
Query: 195 EDT-------------------LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI 235
D + EM G Y L+ +G DEA+E+
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181
Query: 236 FEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
FE M+ S C D TF ++I S GK+ EA ++ EM+E G+EP L V SLI
Sbjct: 182 FERMRKS-GCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240
Query: 296 KAQRTDD 302
KA + D+
Sbjct: 241 KAGKVDE 247
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+++R D ++++I Y AG+ D + EEM A G P+ Y L+D + + R +
Sbjct: 118 KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+++ M +G ++ T+ +L+ A ++ +YREM E+G + + + ++L+
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G DEA EI++ + + + S M C G+V + + +M+E
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKL-GRVDDGLKLLLQMVECDNF 296
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ L+ + +A R DD + L G P+
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPN 333
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+++L+ Y D VY+ M A G+KPN +T+N L+ + + + + +++
Sbjct: 642 DCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLF 701
Query: 167 KEMTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM + + + P +Y L+ G+A + S ++EM ++G+ Y +L+ A
Sbjct: 702 KEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAK 761
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++ EDM PD +S++IT V A +F EM++ G PN
Sbjct: 762 AGRIPEAKKLVEDM-VKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEV 820
Query: 286 VLTSLIQCYGKAQRTDDV 303
L + + A R D+
Sbjct: 821 TYKVLRRGFRAAGRALDL 838
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 9/273 (3%)
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM GL P+ +L +AR + + ++ EM G + ++ YNT+++ A +
Sbjct: 9 KEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASI 68
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA++ F M + C+PD F+++I G+ + N+ L+ F P++F+
Sbjct: 69 DKMDEAYKFFNSMIDN-GCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFL 126
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
TS+I Y KA D + L + G PD L++ + + + +E +L E +
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR 186
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENAC 405
KS YV + L E EA EL+ + + + Y L V +L+ C
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPY------LEVQDSLIFALC 240
Query: 406 KLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLG 438
K ++ E+Y + ++ + SL G
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDG 273
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 68 GKTGSSPKSYIWVNPKSPRASKLK--EKSYDTRARNEKWRIDPNAFSTLIKLYG--TAGN 123
K+G P + + N KL+ ++++ R I PNA + + ++G G
Sbjct: 635 AKSGVGPDCFAY-NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 693
Query: 124 FDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
D ++++EM + V P +++Y L+D +G+A R + + ++EM D G+ P +TY
Sbjct: 694 TDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYT 753
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
SL+ + +A + + +M + G+ V Y+ L+ D D A+++F++M
Sbjct: 754 SLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM-K 812
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAM 271
C P+ T+ + G+ + EA+
Sbjct: 813 RGCAPNEVTYKVLRRGFRAAGRALDLEAV 841
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 1/233 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FS LI Y G D + V+ +M+ G+ PN +TY ++ + ++ R +
Sbjct: 370 DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D GLSP Y SL+ E + EM ++G+ L+ +N+++
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E+ ++FE M +P+ T++++I GK+ EA + + M+ G +PN
Sbjct: 490 GRVIESEKLFELMVRI-GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
++LI Y K R +D + + G++PD +L + QT + K
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I + G+ D + Y EM G+ P+++TYN+++ + +A+ + +
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M NG+ P+ TY S+L Y + ++ + ++M+ G++ V Y+ L+
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +IF+ M + +P+ T+ +++ + +G + E + + M+ G P+ +V
Sbjct: 315 GRCMEARKIFDSM-TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ LI Y + D + +++ + G+ P+ G ++ ++ ++ + E
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++TLI Y AG D + + M ++G+KPN +TY+ L++ + R
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++KEM +G+SP+ TY +L+ + R +Y + E G Q+ ++ YN +L
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
TD+A ++F+++ + + ++ TF+ MI G+ EA+ +F G PN
Sbjct: 627 CKNKLTDDALQMFQNL-CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 6/271 (2%)
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
P T S Y+ N + A K+ +D+ + + + + TL++ Y T G
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKI----FDSMTK-RGLKPEITTYGTLLQGYATKGALV 353
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ + M G+ P+ ++ L+ + Q ++ +M GL+PN TY +++
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
++ ED + + +M ++G+ +YN+L+ + A E+ +M C
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
++ F+S+I G+V E+E +F M+ G +PN+ +LI Y A + D+ ++
Sbjct: 474 L-NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
L+ + +G+ P+ L+N + + E
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 5/227 (2%)
Query: 104 WRIDPNAFSTLIK-LYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+R+D AF+ L+K L D V M +G PN+ +YN LL + R +
Sbjct: 118 FRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEA 177
Query: 163 KTIYKEMTDN---GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ M D+ G P+ +Y +++ + + + S Y EM ++G+ V YN++
Sbjct: 178 LELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSI 237
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+A D+A E+ M + PD T++S++ G+ EA +M G
Sbjct: 238 IAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
EP++ + L+ K R + + + + + G+ P+ G LL
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 6/216 (2%)
Query: 108 PNAFSTLIKLYGTAGNFDG-----CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
PN FS I L G L++ + + G P++++Y +++ + +
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ Y EM D G+ P+ TY S++ A +A+ + + V M + G+ YN++L
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G EA + M+ S+ +PD T+S ++ G+ EA +F+ M + G +P
Sbjct: 276 YCSSGQPKEAIGFLKKMR-SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +L+Q Y ++ L+ + GI PD
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 13/263 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+++I + G ++E M IGVKPN+ITYN L++ A + + + M
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL PN TY++L+ Y + ED L +++EM+ G+ + YN +L T
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS-EAEAMFNEMLEAGFEPNLFVLTS 289
A E++ ++ +E+ + ++I C+ K++ +A MF + +
Sbjct: 599 AAKELY--VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD---DRFCGCLLNVMTQTPKEELGKLVECVEK 346
+I K R D+ G+ P+ R N++ Q EEL +L +E
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA--ENIIGQGLLEELDQLFLSMED 714
Query: 347 S-----NSKLGYVVKLLLEEQDI 364
+ + L ++V+ LL+ +I
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEI 737
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI--FEDMK--SSENCQPDSW 250
ED V+ E+ +G S+ N LA DV A + + M ++ PD
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALA---DVARDSPAAAVSRYNRMARAGADEVTPDLC 88
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR-ALNR 309
T+ +I C G++ A +++ GF + T L++ +RT D + L R
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 310 LPELGITPD 318
+ ELG P+
Sbjct: 149 MTELGCIPN 157
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+S T+ + + D +++LI +G G D C+ ++E+MK P++ITYN L++
Sbjct: 275 RSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINC 334
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ +R + EM NGL PN TY++ + A+ + ++ + + +M+ + +
Sbjct: 335 FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 394
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
Y +L+ G EA ++ E++ + + + T+++++ G++ EAE +F
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQA-GIKLNVVTYTALLDGLCEEGRMKEAEEVF 453
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
ML AG PN T+L+ + KA+ + L + E I PD G +L +
Sbjct: 454 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 513
Query: 333 PKEELGKLV 341
+ E KL+
Sbjct: 514 SRLEEAKLL 522
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 3/215 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+ +LI AGN L + EE+ G+K N++TY LLD + R + +
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 450
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ M + G++PN TY +L+ + +A+ E + +EMKEK ++ + LY T+L
Sbjct: 451 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 510
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ +EA + ++K S ++ +++++ G+ +EA + EML+ G
Sbjct: 511 CNESRLEEAKLLIGEIKES-GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIAT 569
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI K+ + + R+ E+G+ P+
Sbjct: 570 EVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPN 604
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 12/243 (4%)
Query: 92 EKSYDTRARNEKWRI--DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ + + K+R+ P + + L+ G D +++M A G+K ++ TYN +
Sbjct: 202 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 261
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D + + ++++ +M + G +P+ TY SL+ +G+ ++ + ++ +MK+
Sbjct: 262 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 321
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
V YN L+ +AFE +MK++ +P+ T+S+ I G + EA
Sbjct: 322 DPDVITYNALINCFCKFERMPKAFEFLHEMKAN-GLKPNVVTYSTFIDAFCKEGMLQEAI 380
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
F +M PN F TSLI KA + ++ + + + GI LNV+
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK---------LNVV 431
Query: 330 TQT 332
T T
Sbjct: 432 TYT 434
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 114/231 (49%), Gaps = 16/231 (6%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
E+K G+ N + Y L+D ++ + + T+ +EM D GL TY +L+ ++
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSG 584
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
++ + + M E G+Q +V +Y L+ +C + + + A ++F++M + PD
Sbjct: 585 LVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCF-EVAKKLFDEM-LDKGMMPDKIA 642
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I G + EA + + M+E G E +L T+LI +G + + V +A N L
Sbjct: 643 YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALI--WGLSH-SGQVQKARNLLD 699
Query: 312 EL---GITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN--SKLGYVVKL 357
E+ G+ PD+ CL+ LGK+ E +E N +K G + L
Sbjct: 700 EMIGKGVLPDEVVYMCLIK-----KYYALGKVDEALELQNEMAKRGMITGL 745
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+ NA ++TL+ Y +G L + EEM +G+ +TY L+D + ++ +
Sbjct: 531 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAM 590
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M++ GL PN Y +L+ + E ++ EM +KGM Y L+
Sbjct: 591 HHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGN 650
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + D + D ++++I S G+V +A + +EM+ G P+
Sbjct: 651 MKHGNLQEALNL-RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPD 709
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
V LI+ Y + D+ + N + + G+
Sbjct: 710 EVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI N + ++ ++M A GVK +++TYN L+D + +A R + + + + M
Sbjct: 155 FNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214
Query: 171 DNGLSPNWNTYASLLRAYGRARYGE--DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+G +P+ Y+S + YG + G+ D V +M++ +V YNT+L G
Sbjct: 215 ASGCAPDVVAYSSFV--YGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGK 272
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A E+ E M SS+ C + +S+++ G+ EA ++ M AG P++ +
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ KA + ++ V A+ + G P+
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+S+ + +G V E+M+ PN++TYN +LD + ++ + +
Sbjct: 221 DVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMM 280
Query: 167 KEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M + +G N Y++++ + ++ SV M G + V Y++L+
Sbjct: 281 EQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCK 340
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFE--- 281
G +EA E +M + E C+P++ T+ S++ +CSC G+++EAE M EM G
Sbjct: 341 AGKIEEAVEAVREM-AMEGCKPNAVTYCSLVHGLCSC-GRLAEAERMVEEMSSGGGGGHH 398
Query: 282 --PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ +LI KA R DD ++ R+ G PD
Sbjct: 399 CPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPD 437
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 9/239 (3%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
+E D +R + D +STL+ Y AG + + +E+ + G++P+ + Y ++
Sbjct: 65 EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
++ ++ R + + +EM G P T+ +L+ R + E S+ ++M G++
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
V YNTL+ G EA ++ E MK+S C PD +SS + GKV +A
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS-GCAPDVVAYSSFVYGLCKSGKVLDAHQ 243
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+ +M ++ +PN+ +++ K+ + D + + ++ + D GC LNV+
Sbjct: 244 VLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA----SSD----GCGLNVV 294
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 112/217 (51%), Gaps = 9/217 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ F+ L+ + G C + E M A ++PN+++YN LL+ + + +R + + +
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 166 YKEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-M 222
++M G +P+ TY++LL Y +A E++ + +E+ +G++ +Y ++A +
Sbjct: 68 VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE-AEAMFNEMLEAGFE 281
C + + E +++ C P TF+++I+ C CR K E A+++ +M +G +
Sbjct: 128 CKSARLGEALELLEEMIRA--GCCPTLITFNTLISGC-CREKNLEMADSLLQKMAASGVK 184
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ +L+ KA R + + L R+ G PD
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 7/201 (3%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVK 163
DPN ++T++ +G D L + E+M + G N++ Y+ ++D + + R + +
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + M G P+ TY+SL+ +A E+ + REM +G + + Y +L+
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373
Query: 224 ADVGYTDEAFEIFEDM----KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
G EA + E+M +C P T++++I G++ +A F M G
Sbjct: 374 CSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG 433
Query: 280 FEPNLFVLTSLIQCYGKAQRT 300
+P+ +++++ ++ R
Sbjct: 434 CDPDGVSYSTIVEGLARSGRA 454
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 6/171 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+ST++ G +V E M G +P+++TY++L++ + +A + + +EM
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL-----SVTLYNTLLAMCA 224
G PN TY SL+ + + EM G SV+ YN L+
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLC 414
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
G D+A + F+ M+S + C PD ++S+++ + G+ +AE + +E+
Sbjct: 415 KAGRIDDALKFFQRMRS-QGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +S+L+ AG + + EM G KPN +TY +L+ + R + +
Sbjct: 325 RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAER 384
Query: 165 IYKEMTDNGLS-----PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +EM+ G P+ +TY +L+ +A +D L ++ M+ +G Y+T+
Sbjct: 385 MVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTI 444
Query: 220 LAMCADVGYTDEAFEIFEDMK 240
+ A G +A I +++
Sbjct: 445 VEGLARSGRALQAEMILSEVR 465
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 109/225 (48%), Gaps = 3/225 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ + + Y A + +E+M+ G++P + +N LLD + +++ + + ++ +M
Sbjct: 182 FALISRRYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMK 241
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT 229
D P+ +Y LL +G+ + VYREMK++G + Y L+ A C Y
Sbjct: 242 DRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRY- 300
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D A E+F M++++ C P + ++I +++EA F +GF P +
Sbjct: 301 DAAVELFHKMEANK-CMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNA 359
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
++ Y ++ R DD R ++ + + G+ P R +L+ + + +
Sbjct: 360 VVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARR 404
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 101/218 (46%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++E + D + LI + A +D + ++ +M+A P Y L++ +G +R
Sbjct: 276 KDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRL 335
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ ++ +G +P TY +++ +Y ++ +D + EM++ G+ Y+ +
Sbjct: 336 TEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDII 395
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L T EA+ +F+ M S C+P T+ ++ + +V A +++EM G
Sbjct: 396 LHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKG 455
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P + + ++LI + D+ + + + ++GI P
Sbjct: 456 VLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRP 493
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 122/248 (49%), Gaps = 5/248 (2%)
Query: 73 SPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDP--NAFSTLIKLYGTAGNFDGCLNV 130
+ +++ ++ + RA K+KE + +T + EK+ + P + F+ L+ + + + V
Sbjct: 178 TQETFALISRRYARARKVKE-AVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEV 236
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+++MK +P++ +Y LL+ G+ + ++ +Y+EM D G P+ TY L+ A+ +
Sbjct: 237 FDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCK 296
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
AR + + ++ +M+ + +Y TL+ EA + FE K+S P++
Sbjct: 297 ARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKAS-GFTPEAP 355
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+++++ ++ +A + +EM + G P ++ KA+RT + R +
Sbjct: 356 TYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGM 415
Query: 311 -PELGITP 317
E G P
Sbjct: 416 SSEPGCEP 423
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ + TLI G+ L +E KA G P TYN ++ + ++ R I
Sbjct: 319 PHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVD 378
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK-EKGMQLSVTLYNTLLAMCADV 226
EM G+ P TY +L +AR ++ V++ M E G + SV+ Y ++ M +
Sbjct: 379 EMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNE 438
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D A ++++MK+ + P FS++I K+ EA F+EML+ G P +
Sbjct: 439 ERVDMALRVWDEMKA-KGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAM 497
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
++L Q + D V+ +L ++ T
Sbjct: 498 FSNLKQTLLDEGKQDMVLILAQKLDKIRTT 527
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 3/228 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K R P F +I + G L+V++ M+ G P + TYN L+ + ++
Sbjct: 185 QKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKM 244
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + I EMT G+SPN +TY +++ Y + + +++++G+QL V Y L
Sbjct: 245 EKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEAL 304
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L C G A + ++M S++N +++ ++ +I + RG V EA + +M G
Sbjct: 305 LKACCKSGRMQSALAVTKEM-SAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREG 363
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+P++ TS I KA + + + +G+ P+ + L+N
Sbjct: 364 VQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIN 411
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + T++ Y G+ D CL V+E K G+ P++ITY L++ + + + + KE
Sbjct: 54 DIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKE 113
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY+ L+ + + + + +++ ++ + G++ V LYN ++ +G
Sbjct: 114 MEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGK 173
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A ++M+ + +P + TF +I + +G++ +A +F+ M +G P +
Sbjct: 174 MDRAVCTVKEMQKQRH-KPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYN 232
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+LI + ++ + + L+ + G++P++
Sbjct: 233 ALILGLVEKRKMEKAEQILDEMTLAGVSPNEH 264
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 11/249 (4%)
Query: 71 GSSPKSYIWVNPKSPRAS---KLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G SP + + AS K +Y T+ R+E ++D + L+K +G
Sbjct: 258 GVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSA 317
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L V +EM A + N YN L+D R W+ + ++M G+ P+ +TY S + A
Sbjct: 318 LAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINA 377
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+A + EMK G++ +V Y TL+ A ++A FE+MK S +P
Sbjct: 378 CSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLS-GLKP 436
Query: 248 DSWTFSSMITICSCRGKVSEA------EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT- 300
D + ++T R V+ ++ EM++ ++ +C K +RT
Sbjct: 437 DRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTG 496
Query: 301 DDVVRALNR 309
++ AL +
Sbjct: 497 GEITEALQK 505
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 10/232 (4%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+ + ++ + +I Y N D + EM+ G+ + Y+ ++D
Sbjct: 9 AKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGD 68
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ +++ + GL+P+ TY L+ Y + L V +EM+ G++ ++ Y+
Sbjct: 69 EDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSM 128
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ + AF IFED+ + +PD ++++IT GK+ A EM +
Sbjct: 129 LINGFLKLKDWANAFAIFEDL-IKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQ 187
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+P +I + R ++ +AL+ + R GC+ V T
Sbjct: 188 RHKPTTRTFMPIIHGFA---RKGEMKKALDVFDMM------RMSGCIPTVHT 230
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E + S N Y +++ AY + + ++ REM+E+G+ + +Y+T++
Sbjct: 6 FQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTM 65
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG D+ +FE K P T+ +I + + GKVS+A + EM AG + N+
Sbjct: 66 VGDEDKCLLVFERFKEC-GLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMK 124
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
+ LI + K + + L + GI PD FCG
Sbjct: 125 TYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCG 170
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 135/280 (48%), Gaps = 29/280 (10%)
Query: 120 TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
+ G V+++M I PN+I+Y ++D + ++++ + T++K+M D + P+
Sbjct: 183 SGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVV 241
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
TY +L+ G+ R ++ ++ E + KG +V YNT++ G + A +++DM
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ +PD +T+S++I + + +A ++ EML+ G P++ +L+ K+
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGC 361
Query: 300 TDDVVRALNRLPELGI----TPD--------DRFCGC-LLNVMTQTPKEELGK--LVECV 344
D +A+ ++G+ P+ DRFC L + KE G+ L + V
Sbjct: 362 ED---KAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAV 418
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVK 384
+ V++ L +E I+ EA ELF SI K K
Sbjct: 419 TFTT-----VIQKLCKESRID-----EAHELFESIGKTCK 448
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
YD R + D +S LI + + +YEEM G P+++TYN LLD +
Sbjct: 298 YDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLC 357
Query: 155 RAKRPWQVKTIYKEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
++ + I+++M N PN TY L+ + + D + + +EM+ + +
Sbjct: 358 KSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDA 417
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+ T++ DEA E+FE + + C+PDS F++M+ ++ +A+ + +
Sbjct: 418 VTFTTVIQKLCKESRIDEAHELFESI--GKTCKPDSVLFNTMLAGYCKITRIDDAKKLHD 475
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
ML++G P L T+L+ + + R D + + + E+G P+
Sbjct: 476 RMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + LI G +++EE +A G P ++TYN ++D + + R T+Y
Sbjct: 239 DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLY 298
Query: 167 KEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+M + L P+ TY++L+ + GE +Y EM + G V YNTLL
Sbjct: 299 DDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCK 358
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A EIF M C P+ T++ +I ++ +A + EM P+
Sbjct: 359 SGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAV 418
Query: 286 VLTSLIQCYGKAQRTDD 302
T++IQ K R D+
Sbjct: 419 TFTTVIQKLCKESRIDE 435
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
N T NNLL +A+R ++ N P+ +Y +L+ + +A + L+++
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICS 260
EMK+ G+ + + L +C+ G A+E+F+DM S P+ +++ MI +C
Sbjct: 161 GEMKDSGIAVLRSHNIVLRGLCSG-GKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCK 217
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
R KV +A +F +M++ P++ +LI GK +R
Sbjct: 218 SR-KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRV 256
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 28/328 (8%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+A + LIK +G G + L V+ +MK G++P + TYN L++ + A + +++
Sbjct: 188 SAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEV 247
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + P+ TY ++++ Y +A + + R+M+ +G + Y T++ C Y
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC----Y 303
Query: 229 TDEAF----EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D F ++++M + Q FS +I GK++E +F M+ G +PN+
Sbjct: 304 ADSDFGSCVALYQEM-DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ T LI Y K+ +D +R L+R+ + G PD ++N + + G++ E +
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN-----GRVEEAL 417
Query: 345 EKSNSKL--GYVVKLLLEEQDIEGDFK----KEATELFNSISKD--VKKAYC-NCLIDLC 395
+ ++ G + + I+G K EA LF +S+ + +YC N LID
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 396 VNLNLLENACKLL-----ELGLTLEVYT 418
++ A L E G VYT
Sbjct: 478 TKHRKVDEAIALFKRMEEEEGCDQTVYT 505
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++ P+AFS +I G + V+E M G KPN+ Y L+D ++
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ M D G P+ TY+ ++ + E+ L + + G+ ++ Y++L+
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM-LEAGFEPN 283
G DEA +FE+M S + C DS+ ++++I + KV EA A+F M E G +
Sbjct: 444 KAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++ T L+ K R ++ ++ + + + GITP
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 3/229 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI Y +G+ + + + M G KP+++TY+ +++ + + R +
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY 419
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +GL+ N Y+SL+ G+A ++ ++ EM EKG YN L+
Sbjct: 420 FHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA +F+ M+ E C +T++ +++ + EA +++ M++ G P
Sbjct: 480 HRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAA 539
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+L + + + L+ L +G+ D C ++N + + +
Sbjct: 540 CFRALSTGLCLSGKVARACKILDELAPMGVILDAA-CEDMINTLCKAGR 587
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E ++ D +S ++ G + L+ + + G+ N + Y++L+D +G+A
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLY 216
R + + +++EM++ G + + Y +L+ A+ + R ++ +++++ M +E+G +V Y
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
LL+ +EA +++ DM + P + F ++ T GKV+ A + +E+
Sbjct: 507 TILLSGMFKEHRNEEALKLW-DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA 565
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
G + +I KA R + + + + E G R ++N + + K +
Sbjct: 566 PMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKAD 624
Query: 337 LG 338
L
Sbjct: 625 LA 626
>gi|62320562|dbj|BAD95174.1| hypothetical protein [Arabidopsis thaliana]
Length = 468
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 122/233 (52%), Gaps = 7/233 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLIK Y D V M+ G++P++ TYN+L+ + +V ++
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLVLNRVLQLF 106
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR-ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM +GLSP+ +Y +L+ Y + R+GE ++ ++ G+ + YN LL
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G+TD A E+F+ +KS +P+ T++ +I +C R +V + M E+ ++G+ PN
Sbjct: 167 SGHTDNAIELFKHLKS--RVKPELMTYNILINGLCKSR-RVGSVDWMMRELKKSGYTPNA 223
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC-LLNVMTQTPKEE 336
T++++ Y K +R + ++ ++ + G T D F C +++ + +T + E
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG-FANCAVVSALIKTGRAE 275
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L+ +G+ D + +++ +K+ VKP ++TYN L++ + +++R V + +E
Sbjct: 155 DTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRE 213
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ +G +PN TY ++L+ Y + + E L ++ +MK++G +++ G
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+EA+E ++ S D ++++++ + G + + + E+ G +P+ + T
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ T + L + E+G+ P C CL++
Sbjct: 334 IIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLID 372
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
KW + P+ +F+TL+ Y G+ D + M+A GV+P++ TY+ L++ + + R
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMD 223
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ EM DNGL PN T+ +L+ + + + + +YR+M +G V YNTL+
Sbjct: 224 EANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLI 283
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +A + ++M S + +PD T++++I G + A + M++
Sbjct: 284 YGLCKKGDLKQARYLLDEM-SRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESI 342
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ V T+LI + R D + L + +G+ PDD
Sbjct: 343 RLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDD 381
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D FS LI Y +G + + K + T N+L+ + + K V
Sbjct: 63 RSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWG 122
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL--SVYREMKEKGMQLSVTLYNTLLAM 222
YKE+ + G + + L+ + + GE L SV+ + + G++ SV +NTL+
Sbjct: 123 FYKEILECGYPASLYFFNILMHRF--CKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNG 180
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+G DE F + M++S QPD +T+S +I ++ EA +F EML+ G P
Sbjct: 181 YIKLGDLDEGFRLKNAMRAS-GVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVP 239
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N T+LI + K R D + ++ G +PD
Sbjct: 240 NGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPD 275
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 124 FDGCLNV----------------YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
FD C NV Y+E+ G ++ +N L+ + ++++
Sbjct: 101 FDTCRNVLEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFD 160
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
+T GL P+ ++ +L+ Y + ++ + M+ G+Q V Y+ L+
Sbjct: 161 AITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKES 220
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA +F +M + P+ TF+++I G++ A ++ +ML GF P++
Sbjct: 221 RMDEANGLFGEMLDN-GLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTY 279
Query: 288 TSLIQCYGKAQRTD--DVVRALNRLPELGITPD 318
+LI YG ++ D L+ + G+ PD
Sbjct: 280 NTLI--YGLCKKGDLKQARYLLDEMSRKGLKPD 310
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 75 KSY-IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
KSY I + S + + LK +++ ++ D + +I Y A +D + +Y +
Sbjct: 226 KSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHD 285
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M + V P+ Y + +G R + +++ +G P TY +++ AY +
Sbjct: 286 MLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMR 345
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+D + EMKE G+ + Y+ +L G T EA+ +F+ M S C+P T++
Sbjct: 346 IDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYA 405
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
M+ + ++ A ++NEM + G P + + ++LI + DD R ++ ++
Sbjct: 406 IMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDV 465
Query: 314 GITP 317
GI P
Sbjct: 466 GIRP 469
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK-RPWQVKT 164
++ + FS + + Y A L +E M+ G+KP + +N L+D + ++K + +
Sbjct: 152 LNGDTFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQE 211
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC 223
++ +M L PN +Y L+ + + + V REMK+ G Q V Y ++ A C
Sbjct: 212 LFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYC 271
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
Y DEA I+ DM S+N P + + IT ++ EA F + +GF P
Sbjct: 272 KAKKY-DEAIGIYHDM-LSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPE 329
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+++ Y + R DD R + + ELGI P+ R +L
Sbjct: 330 APTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIIL 372
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 116/236 (49%), Gaps = 6/236 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIK-LYGTAGNFDGCLNVYEEMKAIGVKPN 142
RA +KE + T R EK+ + P F+ LI L + + + ++++M+ ++PN
Sbjct: 166 RAKVIKE-ALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPN 224
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+ +Y L++ + + +V + +EM D+G P+ TY ++ AY +A+ ++ + +Y
Sbjct: 225 LKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYH 284
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+M K + S +Y T + + DEAFE FE K+S P++ T++++++
Sbjct: 285 DMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKAS-GFPPEAPTYNAVVSAYCWS 343
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL-PELGITP 317
++ +A + EM E G PN ++ K RT + R+ E G P
Sbjct: 344 MRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEP 399
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ + T I G D +E+ KA G P TYN ++ + R I
Sbjct: 295 PHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVG 354
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK-EKGMQLSVTLYNTLLAMCADV 226
EM + G+ PN TY +L + ++ SV++ M E G + SV+ Y ++ M +
Sbjct: 355 EMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNE 414
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D A ++ +MK + P FS++I K+ +A F +ML+ G P +
Sbjct: 415 NQLDMAMVVWNEMKD-KGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANM 473
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++ + A + V+ ++ +L TP
Sbjct: 474 FSAFKRALMAAGMENTVIHFAKKVDKLRNTP 504
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 138/304 (45%), Gaps = 20/304 (6%)
Query: 22 TFTFSFQRDDSLSFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVN 81
T + SF+R +L SK++ S ++Q Q NP++ + +P + +
Sbjct: 2 TLSRSFRRFPNLFPLSKSTSHFESPTVQFIQ--NPSRSLKFHIFPFHTS-------LLHK 52
Query: 82 PKSPRA-------SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
P +P A S E D RN + P ++ AG + E
Sbjct: 53 PNNPHAETICRILSTTPESPVDVSLRNFPVEVSPELVVAVLNKLSNAGILALSFFRWAE- 111
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
K G N ++ L++ +G+ ++ + + EM L N +T++ + R Y RA+
Sbjct: 112 KQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLL-NGDTFSLIARRYVRAKVI 170
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ L + M++ G++ ++ +N L+ +C + ++A E+F+ M+ N +P+ +++
Sbjct: 171 KEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQW-NLEPNLKSYT 229
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
+I S + + + + + EM + GF+P++ +I Y KA++ D+ + + +
Sbjct: 230 ILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSK 289
Query: 314 GITP 317
+ P
Sbjct: 290 NVNP 293
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 139/283 (49%), Gaps = 14/283 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPWQV 162
+D A + L+ G+ V++EM +G+ PN +TY L+ T G+ ++ +
Sbjct: 36 LDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGF-- 93
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+++EM G+ PN TY L+ + R E S++ EM +G+ +V YNTL+A
Sbjct: 94 -ALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAG 152
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G +A ++ DM +E +P TF+ ++ GK+S A FN+M AGF+P
Sbjct: 153 LCRHGKLWDAAKLL-DMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQP 211
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
+ LI + +A+ RAL+ + E G+ P L++ + + +GK E
Sbjct: 212 SAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR--ENHMGKAFE 269
Query: 343 CV---EKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+ EK+ ++ + +L+ +EG+ K+A +LF S+ +
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNM-KDARKLFQSMGE 311
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++TLI G + + M+ G +P++IT+N L+D G+A + + +M
Sbjct: 145 SYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM 204
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P+ TY L+ + RAR +MKE+G++ + Y L+ A +
Sbjct: 205 KAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHM 264
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+AFEI M+ + + D+ T+ ++ G + +A +F M E G EP+ +
Sbjct: 265 GKAFEILAGMEKA-GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
+I YG+ + ++ + + + G+ P+ G + V+ + K +E L++ +E
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIR 383
Query: 349 SKLGYVVKLLLEEQDIEGDFKKEATELF 376
S G+ + + D + + + TE F
Sbjct: 384 SFAGHHQNFIASKSDSQQKDEDKCTEHF 411
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R E R F+ L+ YG AG L + +MKA G +P+ +TYN L+ RA+
Sbjct: 170 RTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDM 229
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +M + GL P TY L+ ++ R + + M++ G+++ Y L
Sbjct: 230 TRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVL 289
Query: 220 L-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ A+C + G +A ++F+ M + +P + + MI G +A + EM +
Sbjct: 290 VRALCME-GNMKDARKLFQSM-GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347
Query: 279 GFEPN 283
G PN
Sbjct: 348 GLIPN 352
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 93 KSYDTRARNEK--WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K+++ A EK +D + + L++ GN +++ M GV+P+ + Y+ ++
Sbjct: 266 KAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMI 325
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
GR ++ + EM GL PN +Y +R
Sbjct: 326 YGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIR 361
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 5/250 (2%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK+ + + E P +++TLI Y G + + + M+ GV+P+ +T+N L
Sbjct: 198 EKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTL 257
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ R + + I+ EM N + PN TY +L+ Y + E ++ EM G+
Sbjct: 258 INGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGI 317
Query: 210 QLSVTLYNTL-LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ + YN L L +C + G T +A + +++ EN P+S TFS++IT R A
Sbjct: 318 KADILTYNALILGLCME-GRTKKAAYLVKEL-DRENLVPNSSTFSALITGQCVRKNSERA 375
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
++ M+ +G PN LI + K + D V + + E I PD L
Sbjct: 376 FQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRG 435
Query: 329 MTQTPKEELG 338
+ + KEEL
Sbjct: 436 LWLSGKEELA 445
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 22/363 (6%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P F +L K Y ++V+ +MK G P + + N + +R T Y+
Sbjct: 111 PCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYR 170
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM +SPN T ++ A+ + E + V+++M+ G ++T YNTL+A + G
Sbjct: 171 EMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKG 230
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+ ++ + + +PD TF+++I GK+ EA +F+EM PN
Sbjct: 231 LLNSGMKL-KILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITY 289
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKS 347
+LI Y + ++ R + + GI D L+ L C+E
Sbjct: 290 NTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALI-------------LGLCMEGR 336
Query: 348 NSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAY--------CNCLIDLCVNLN 399
K Y+VK L E + A + K+ ++A+ C +
Sbjct: 337 TKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKM 396
Query: 400 LLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGE 459
L+ CK + +EV ++ RS S L L G L+ L K +E
Sbjct: 397 LISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKH 456
Query: 460 EFP 462
P
Sbjct: 457 LMP 459
>gi|224140601|ref|XP_002323670.1| predicted protein [Populus trichocarpa]
gi|222868300|gb|EEF05431.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ ++ TA D L +Y + ++PN T++ ++ + K P + K + +M
Sbjct: 144 FNDVLMALVTANESDLVLKLYSGLSCYSLEPNSWTFSIMVRCHCKKKDPGEAKRVLDQMM 203
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G +PN T L+ ++ + ++T V+ M G + ++ YN LL VG D
Sbjct: 204 QKGFNPNVATLTILINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCYVGRID 263
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EAFE+ ED+K + +PD +T+++M+ G+ EA + NE +E G PN+ +L
Sbjct: 264 EAFELMEDIKKT-TVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTL 322
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ Y K R L + + PD
Sbjct: 323 LDGYAKEGRPLKGFGVLKLMKQRKCMPD 350
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 106/226 (46%), Gaps = 14/226 (6%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+++++ +K ++P+ ++ ++ + G D + + E +G+ PN++T+N L
Sbjct: 263 DEAFELMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTL 322
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA---YGRARYGEDTLSVYREMKE 206
LD + RP + + K M P++ +Y++LL +G+ G L ++ EM+
Sbjct: 323 LDGYAKEGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGLLLWGKVLAG---LRIFNEMEG 379
Query: 207 KGMQLSVTLYNTLL-AMC----ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
G++ L N+L+ +C + + A+E+FE MK S T++ +I
Sbjct: 380 SGLEADERLMNSLVRGLCRKSIKENDLVEVAYEVFEKMKKRGFVIEQS-TYALVIQALWV 438
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
KV +A ++M+ G+ P L + ++IQ + D L
Sbjct: 439 AKKVDDAFINLHQMVRLGYIPRLITINNVIQALCVGGKVDKAFYVL 484
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 99/253 (39%), Gaps = 43/253 (16%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN + LI + G V+E M IG KPN+ TYN LL M R +
Sbjct: 208 NPNVATLTILINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCYVGRIDEAFE 267
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +++ + P+ TY +++ + + ++ + + E E G+ +V +NTLL A
Sbjct: 268 LMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYA 327
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM--------- 275
G + F + + MK + C PD ++S+++ GKV +FNEM
Sbjct: 328 KEGRPLKGFGVLKLMKQRK-CMPDYISYSTLLHGLLLWGKVLAGLRIFNEMEGSGLEADE 386
Query: 276 -------------------------------LEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+ GF +IQ A++ DD
Sbjct: 387 RLMNSLVRGLCRKSIKENDLVEVAYEVFEKMKKRGFVIEQSTYALVIQALWVAKKVDDAF 446
Query: 305 RALNRLPELGITP 317
L+++ LG P
Sbjct: 447 INLHQMVRLGYIP 459
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
N+ +N++L + A V +Y ++ L PN T++ ++R + + + + V
Sbjct: 140 NISDFNDVLMALVTANESDLVLKLYSGLSCYSLEPNSWTFSIMVRCHCKKKDPGEAKRVL 199
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+M +KG +V L+ +G F++FE M C+P+ T++ ++
Sbjct: 200 DQMMQKGFNPNVATLTILINSFCKMGQLQNTFQVFEVMDRI-GCKPNIQTYNCLLKGMCY 258
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G++ EA + ++ + EP+++ T+++ + K R+D+ + LN E+G+ P+
Sbjct: 259 VGRIDEAFELMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPN 315
>gi|222618027|gb|EEE54159.1| hypothetical protein OsJ_00969 [Oryza sativa Japonica Group]
Length = 610
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L+K + AG + V M+A G P+++TYN L + W+ +
Sbjct: 221 VRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAE 280
Query: 164 TIYKEMTDN-GLSPNWNTYASLLRAYGR-ARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ EM GL + T+ ++ Y R R GE L R+MK+ G+ +V ++NTLL
Sbjct: 281 ELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGE-ALRCVRQMKDSGVLPNVIVFNTLLK 339
Query: 222 M---CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
D+ D+ + E +PD T+S + S G +++ +F++M+EA
Sbjct: 340 GFLDANDMAAVDDVLGLMEQF----GIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEA 395
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G EP+ V + L + Y +AQ+ + L ++ LG+ P+
Sbjct: 396 GIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPN 435
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 104/248 (41%), Gaps = 13/248 (5%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D F+ LI A N + M G +P T+N L+ G A RP + +
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQR 205
Query: 165 IYKEMTDNG------LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
++ M G + PN TY L++A+ A E+ V M+ G V YNT
Sbjct: 206 VFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNT 265
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLE 277
L + A T A E+ +M + T+ +I CR G++ EA +M +
Sbjct: 266 LASAYAKNDETWRAEELVVEMAQQAGLRTSERTW-GIIVGGYCREGRLGEALRCVRQMKD 324
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
+G PN+ V +L++ + A V L + + GI PD LN ++ +
Sbjct: 325 SGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALS-----SM 379
Query: 338 GKLVECVE 345
G + +C++
Sbjct: 380 GHMAKCMK 387
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+I + M A+RP Q + ++ + D+G P+ TY +LL A R + +
Sbjct: 79 VIARTRQMRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLA 138
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
E+++ G++ +N L+ + EA F M S C+P + TF+++I
Sbjct: 139 EVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHS-GCRPTASTFNTLIKGYGIA 197
Query: 263 GKVSEAEAMFNEM------LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G+ E++ +F+ M EA PNL L++ + A R ++ R + R+ G
Sbjct: 198 GRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGAD 257
Query: 317 PD 318
PD
Sbjct: 258 PD 259
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+TL+K + A + +V M+ G+KP+++TY++ L+ + + +
Sbjct: 329 PNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKV 388
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + G+ P+ Y+ L + Y RA+ E + R+M G++ +V + T+++
Sbjct: 389 FDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVIS---- 444
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
WTF ++I S + +AE + M +AG P
Sbjct: 445 -----------------------GWTFETLIWGYSELKQPWKAEEVLQMMQDAGVRP 478
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G +P+++TY LL + + + + E+ D GL P+ + +L+ A AR +
Sbjct: 109 GHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEA 168
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-----KSSENCQPDSWTF 252
+ + M G + + + +NTL+ G +E+ +F+ M +P+ T+
Sbjct: 169 TNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTY 228
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ ++ G++ EA + M +G +P++ +L Y K D+ RA + E
Sbjct: 229 NILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAK---NDETWRAEELVVE 285
Query: 313 L----GITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+ G+ +R G ++ + + LG+ + CV +
Sbjct: 286 MAQQAGLRTSERTWGIIVGGYCREGR--LGEALRCVRQ 321
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL-----DTM----GRAK 157
DP +S L K Y A + + +M +GV+PN++T+ ++ +T+ K
Sbjct: 400 DPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWTFETLIWGYSELK 459
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
+PW+ + + + M D G+ P TY + A+
Sbjct: 460 QPWKAEEVLQMMQDAGVRPKQTTYCLVADAW 490
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
+++ + G + C +++M GV ++ +Y+ +D M ++ +PW+ +YKEM
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
+ + Y +++RA G ++ E + V+REM+E+G + +V +NT++ + + G +A+
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
+ ++M CQPDS T+ + + K SE ++F M+ +G P + L++
Sbjct: 315 RMLDEM-PKRGCQPDSITYMCLFSRLE---KPSEILSLFGRMIRSGVRPKMDTYVMLMRK 370
Query: 294 YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ + V+ + E G TPD +++ + Q
Sbjct: 371 FERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQ 408
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ + ++D A++T+I+ G + + + V+ EM+ G +PN+ T+N ++ + R
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 310
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ EM G P+ TY L + R + LS++ M G++ + Y L
Sbjct: 311 RDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G+ +++ MK S + PDS ++++I +G + A EM+E G
Sbjct: 368 MRKFERWGFLQPVLYVWKTMKESGD-TPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
Query: 280 FEP 282
P
Sbjct: 427 LSP 429
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+T + Y G D L + M+ G+ ++ TYN L + + + R + K I M
Sbjct: 395 FNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMV 454
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ PN T+ + Y + + ++R+M++KG ++ YNTL+
Sbjct: 455 EKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVK 514
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A +I +M ++ PD +T+SS+I G+V EA +FNEM G N+ TS+
Sbjct: 515 QAHKIKSEM-INKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSM 573
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDR 320
I K R D+ + + + ++G+ PDDR
Sbjct: 574 ISGLSKEGRADEAFKLYDEMMKIGLIPDDR 603
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 133/283 (46%), Gaps = 7/283 (2%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDT-MGRAKRPW 160
K+ I + + +I + G + + +EM G VKPN+ TYN LL+ +GR R
Sbjct: 211 KFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRK- 269
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
V I K M + + TY+ L++ Y + E+ ++ EM+EK +++ V +Y++++
Sbjct: 270 GVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMI 329
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ +G AF +F++M S + P++ T+ ++I G++ AE + EM G
Sbjct: 330 SWSRRLGNMKRAFALFDEM-SQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGV 388
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+ NL + + + Y + + D+ +R + + GI D L N + + + + K
Sbjct: 389 DLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKC 448
Query: 341 V--ECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+ VEK + +E EG+ EA LF + K
Sbjct: 449 ILNSMVEKGVKPNVVTFTMFIEIYCKEGNL-AEAERLFRDMEK 490
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+ I++Y GN ++ +M+ G PN+ITYN L+D + ++ Q
Sbjct: 458 VKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAH 517
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I EM + GL P+ TY+SL+ ++ L ++ EM+ KG+ +V Y ++++
Sbjct: 518 KIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGL 577
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ G DEAF+++++M PD F+S++
Sbjct: 578 SKEGRADEAFKLYDEMMKI-GLIPDDRVFTSLV 609
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI-------G 138
R K+ E + +A EK I+ + F+ Y N L+ Y+E K I G
Sbjct: 404 RRGKMDE-ALRLQAIMEKKGINADVFT-----YNILANGLCKLHRYDEAKCILNSMVEKG 457
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
VKPN++T+ ++ + + + ++++M G PN TY +L+ AY + +
Sbjct: 458 VKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAH 517
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
+ EM KG+ + Y++L+ VG DEA ++F +M+ + + T++SMI+
Sbjct: 518 KIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMR-LKGITRNVATYTSMISG 576
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
S G+ EA +++EM++ G P+ V TSL+ + K
Sbjct: 577 LSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPWQVKTIYK 167
+S LI+ Y ++G+ + ++EEM+ ++ ++ Y++++ +G KR + ++
Sbjct: 290 YSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAF---ALFD 346
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM+ + PN +TY +L+ +A E + EM+ KG+ L++ ++NT + G
Sbjct: 347 EMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRG 406
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA + + + + D +T++ + + EA+ + N M+E G +PN+
Sbjct: 407 KMDEALRL-QAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTF 465
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T I+ Y K + R + + G P+
Sbjct: 466 TMFIEIYCKEGNLAEAERLFRDMEKKGEVPN 496
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + +D +S++I GN +++EM + PN TY L+ + +A +
Sbjct: 314 REKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQM 373
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM G+ N + + + Y R ++ L + M++KG+ V YN L
Sbjct: 374 EAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNIL 433
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ DEA I M + +P+ TF+ I I G ++EAE +F +M + G
Sbjct: 434 ANGLCKLHRYDEAKCILNSM-VEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ +LI Y K ++ + + + G+ PD
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPD 531
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L R R ++T+ VY ++EKG+ + LL G D F M S
Sbjct: 151 LFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESN 210
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF-EPNLFVLTSLIQCY-GKAQR-- 299
+ + + +I + RG+V +A+ + +EM+ G +PN+F +L+ Y G+ R
Sbjct: 211 KFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKG 270
Query: 300 TDDVVRALNR 309
D++++ + +
Sbjct: 271 VDEILKLMEK 280
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+T I + G + + ++ +M+ GV PN++TYN ++D +G + R +
Sbjct: 251 DVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFK 310
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G+ P TY+ L++ +A+ D V +EM EKG +V +YN L+ +
Sbjct: 311 EKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEA 370
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A EI +D+ S+ S T++++I G+ AE + EML GF N
Sbjct: 371 GSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGS 429
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
TS+I D +R + + ++P
Sbjct: 430 FTSVICLLCSHHMFDSALRFVGEMLLRNMSP 460
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+ + + + + K G+ P++ TY+ ++D +A+R + + ++
Sbjct: 566 DNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLF 625
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM N L PN Y L+ AY R+ L + +MK KG+ + Y +L+ + +
Sbjct: 626 DEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 685
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA + E+M+ E +P+ + ++++I G++ + E + EM PN
Sbjct: 686 SRVEEAKLLLEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 744
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T +I Y + + R L+ + E GI PD
Sbjct: 745 YTVMIGGYARDGNVTEASRLLHEMREKGIVPD 776
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 34/252 (13%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N+ + +D + L+ AG + + +E+ G + ++YN L+ K+
Sbjct: 490 NKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLD 549
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ EM GL P+ TY+ L+R E+ + + + K GM V Y+ ++
Sbjct: 550 EAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMI 609
Query: 221 AMCADVGYTDEAFEIFEDMKSS----------------------------------ENCQ 246
C T+E ++F++M S+ +
Sbjct: 610 DGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGIS 669
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P+S T++S+I S +V EA+ + EM G EPN+F T+LI YGK + V
Sbjct: 670 PNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 729
Query: 307 LNRLPELGITPD 318
L + + P+
Sbjct: 730 LREMHSKNVHPN 741
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++EM + ++PN + YN+L+ R+ R + ++M G+SPN TY SL++
Sbjct: 624 LFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 683
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
E+ + EM+ +G++ +V Y L+ +G + + +M S +N P+
Sbjct: 684 IISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS-KNVHPNK 742
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
T++ MI + G V+EA + +EM E G P+ I Y K
Sbjct: 743 ITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLK 789
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Query: 114 LIKLYGTAGNFDGC---LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
LI++Y T DGC L+V+ + G+ P+ T N LL ++ RA + + +
Sbjct: 186 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-HVV 244
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+SP+ + + + A+ + E+ + ++ +M+E G+ +V YNT++ G D
Sbjct: 245 CKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYD 304
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EAF +F++ +P T+S ++ + ++ +A + EM E GF PN+ V +L
Sbjct: 305 EAF-MFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNL 363
Query: 291 I 291
I
Sbjct: 364 I 364
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K +D N + PN ++ LI Y +G L + E+MK G+ PN TY +L
Sbjct: 622 QKLFDEMMSNN---LQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSL 678
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ M R + K + +EM GL PN Y +L+ YG+ + REM K +
Sbjct: 679 IKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 738
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ Y ++ A G EA + +M+ + PDS T+ I
Sbjct: 739 HPNKITYTVMIGGYARDGNVTEASRLLHEMR-EKGIVPDSITYKEFI 784
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 115/297 (38%), Gaps = 51/297 (17%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ ++ +F+++I L + FD L EM + P L+ + + + +
Sbjct: 423 FNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAV 482
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + + G + T +LL A E+ + +E+ +G + YNTL++ C
Sbjct: 483 ELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGC 542
Query: 224 ADVGYTDEAFEIFEDM-----------------------KSSENCQ-----------PDS 249
DEAF ++M K E Q PD
Sbjct: 543 CGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDV 602
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+T+S MI C + E + +F+EM+ +PN V LI Y ++ R +
Sbjct: 603 YTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELRED 662
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEG 366
+ GI+P+ L+ M+ ++ VE++ KLLLEE +EG
Sbjct: 663 MKHKGISPNSATYTSLIKGMS---------IISRVEEA--------KLLLEEMRMEG 702
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
L V+ + KGM S T N LL + E F + + PD + F++ I
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVV--CKGVSPDVYLFTTAI 259
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
GKV EA +F++M EAG PN+ ++I G + R D+ ++ E G+
Sbjct: 260 NAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVE 319
Query: 317 P 317
P
Sbjct: 320 P 320
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN F + LI YG G + EM + V PN ITY ++ R +
Sbjct: 703 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 762
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY 188
+ EM + G+ P+ TY + Y
Sbjct: 763 RLLHEMREKGIVPDSITYKEFIYGY 787
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 109/225 (48%), Gaps = 6/225 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++++I Y AG + L+VY +M G +PN +TYN L++ G+A +
Sbjct: 287 PNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRM 346
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y+++ P+ T++SL+ Y R +D + +++EM + +Q +V ++ ++
Sbjct: 347 YRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCK 406
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ EA ++ + P ++ ++ +I I G+V EA + +M E G P+ +
Sbjct: 407 QNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKY 466
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----DRFCGCLL 326
T LI + R + + +++ E G PD + F C+L
Sbjct: 467 TYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVL 511
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 9/241 (3%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
K +D + D FS + AG D + + + G + YNNLL+
Sbjct: 132 KLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNL 191
Query: 153 MGRAKRPWQVKTIYKEMTDNGL-SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ R +++ +GL SP+ ++ +++ R + L + M E G
Sbjct: 192 LIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSP 251
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+N L+ + ++ ++ C P+ T++S+I+ G++ +A ++
Sbjct: 252 DTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSV 311
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
+N+MLE+G PN LI YGKA + VR +L PD D +C
Sbjct: 312 YNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCR 371
Query: 324 C 324
C
Sbjct: 372 C 372
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 35/197 (17%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FS+LI Y G D + +++EM ++PN+ T++ ++ ++ + R +
Sbjct: 358 DVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFL 417
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+E+ RA T +YN ++ +
Sbjct: 418 RELN------------------MRADIAPQTF----------------IYNPVIDILCKG 443
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA I DM+ + C PD +T++ +I +G++ EA +F++M+E G P+
Sbjct: 444 GQVEEANLIVTDME-EKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKIT 502
Query: 287 LTSLIQCYGKAQRTDDV 303
+ S I C KA ++V
Sbjct: 503 VNSFISCVLKAGMPNEV 519
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R+ PN F+ L+ + + G L+ M+ G+ P+++TYN LL R +
Sbjct: 205 RLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEA 264
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+T+ M G++P TY +L+ AY R + + +V M G + + YN L A
Sbjct: 265 RTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAG 324
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G DEAF++ ++M+ PD T+++++ C + S+A + EM + G +
Sbjct: 325 LCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKS 384
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L +++ + + ++ + L + E G+ PD
Sbjct: 385 SLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPD 420
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 134/302 (44%), Gaps = 22/302 (7%)
Query: 121 AGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
AG D + +EM+ + V P+++TYN L+D + +R + +EM D G+ +
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
T+ +++ R E+ L + M E+G+ V YNTL+ +AF + ++M
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
S + D++T ++++ + EAE + + GF P+ +++ Y K +
Sbjct: 448 VRS-GLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENK 506
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKL-------- 351
+ + + + + +TP L+ + +GKL E ++K N +
Sbjct: 507 PEPALYLWDEMSKRKLTPSIYTYNTLIKGLCT-----IGKLTEAIDKLNELMKKGLVPDD 561
Query: 352 ---GYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID-LCVNLNLLENACKL 407
++ +E D+E F+ L N DV CN L++ LC++ LE A KL
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDV--VTCNTLMNGLCLH-GKLEKAIKL 618
Query: 408 LE 409
E
Sbjct: 619 FE 620
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 139/305 (45%), Gaps = 22/305 (7%)
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
LN+ EEM+ GVK +++T+N ++ + R + + K MT+ GL+P+ TY +L+
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLID 429
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENC 245
AY +AR + EM G+++ NTLL +C + Y +EA E+
Sbjct: 430 AYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRY-EEAEELLRS-PPQRGF 487
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD ++ +++ K A +++EM + P+++ +LI+ + + +
Sbjct: 488 VPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAID 547
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVK-------LL 358
LN L + G+ PDD +++ + G L + + N L K L
Sbjct: 548 KLNELMKKGLVPDDTTYNIIIHAYCKE-----GDLEKAFQFHNKMLENYFKPDVVTCNTL 602
Query: 359 LEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYT 418
+ + G +K A +LF S ++ KK +D+ L++ CK ++ L +
Sbjct: 603 MNGLCLHGKLEK-AIKLFESWAEKGKK------VDVITYNTLIQALCKDGDVDTALHFFA 655
Query: 419 DIQSR 423
D+++R
Sbjct: 656 DMEAR 660
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L+V+ + A+ + PN T+N L+ T + M GLSP+ TY +LL+A
Sbjct: 195 LDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKA 254
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R + ++ MK++G+ + YNTL++ A +G+ +A + E M ++ +P
Sbjct: 255 HCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAM-TAFGFEP 313
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF-EPNLFVLTSLIQCYGKAQRTDDVVRA 306
D WT++ + GKV EA + +EM P++ +L+ K QR+ D +
Sbjct: 314 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNL 373
Query: 307 LNRLPELGI 315
L + + G+
Sbjct: 374 LEEMRDKGV 382
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI Y A N + +EM G+K + T N LL + + KR + + +
Sbjct: 420 DVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 479
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G P+ +Y +++ AY + E L ++ EM ++ + S+ YNTL+ +
Sbjct: 480 RSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTI 539
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA + ++ + PD T++ +I G + +A N+MLE F+P++
Sbjct: 540 GKLTEAIDKLNELM-KKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVT 598
Query: 287 LTSLIQ---CYGKAQR 299
+L+ +GK ++
Sbjct: 599 CNTLMNGLCLHGKLEK 614
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRA--KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
V+P++ N +L + R+ P +++ + L PN T+ L+ + D
Sbjct: 169 VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLAD 228
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
LS M+ G+ V YNTLL G EA + MK E P T+++++
Sbjct: 229 ALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKK-EGIAPTRATYNTLV 287
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+ + G + +A + M GFEP+L+ L +A + D+ + + + L I
Sbjct: 288 SAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIV 347
Query: 317 PDD 319
D
Sbjct: 348 SPD 350
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/228 (16%), Positives = 94/228 (41%), Gaps = 35/228 (15%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I Y G+ + + +M KP+++T N L++ + + + ++
Sbjct: 560 DDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLF 619
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + G + TY +L++A + + L + +M+ +G+Q YN +L+ ++
Sbjct: 620 ESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEA 679
Query: 227 GYTDEAFEIFEDMKSS----------------------------ENCQP-------DSWT 251
G ++EA + + S +C+ D +
Sbjct: 680 GRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQES 739
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
++ + G++ EA+A+ +EM++ G + +L++ K Q+
Sbjct: 740 YNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 112/217 (51%), Gaps = 1/217 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y G D V M+ G + ++ T N + D + + +P + K M
Sbjct: 109 YNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMI 168
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+ PN +Y +L+ Y + + +++EMK+ G + + YN L+ + G
Sbjct: 169 EKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMK 228
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+E+ ++M++ + PD +T++S++ GK+ +A +FNE+ + G N+ T++
Sbjct: 229 EAYELRDEMRA-KGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAI 287
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
I K R+++ + + + E G+TPDDR L++
Sbjct: 288 ISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVS 324
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 90/154 (58%), Gaps = 7/154 (4%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +++TLI +Y GNF +++EMK G +PN +TYN L+D + R + +
Sbjct: 174 PNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYEL 233
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
EM G+ P+ TY SLL +G +G +D + ++ E+++KG+ L+V Y +++
Sbjct: 234 RDEMRAKGIFPDIYTYTSLL--HGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGL 291
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ G ++EAF+++++M + PD ++S+++
Sbjct: 292 SKEGRSEEAFKLYDEMTEA-GLTPDDRVYTSLVS 324
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 40/245 (16%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPWQVKTIYK 167
++ LI +G++G D ++EEM G+K ++ Y +++ +G KR + ++
Sbjct: 4 YTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAF---ALFD 60
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
E+T+ GL N +TY +L+ +A E + EM+ +G+ ++ +YNTL+ G
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120
Query: 228 YTDEAF--EIFEDMKSSEN--------------------------------CQPDSWTFS 253
DEAF ++ + K EN P+ +++
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I I G EA+ +F EM +AG EPN LI + K R + + +
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240
Query: 314 GITPD 318
GI PD
Sbjct: 241 GIFPD 245
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
GV PN+++Y L+D + + K +++EM G PN TY L+ + + ++
Sbjct: 171 GVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEA 230
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ EM+ KG+ + Y +LL G D+A E+F +++ + + T++++I+
Sbjct: 231 YELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVR-QKGLPLNVVTYTAIIS 289
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
S G+ EA +++EM EAG P+ V TSL+ KA
Sbjct: 290 GLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY L+D G + + +V+ +++EM + G+ + + Y ++ + + +++ E+
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
EKG+ +V Y L+ G EA EI + + + ++++I RG
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEM-EAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGL 121
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EA + M + GFE +++ L ++ K + ++ R L + E G+ P+
Sbjct: 122 IDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPN 175
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 69 KTGSSPKS--YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTA--GNF 124
K G P + Y + + ++KE +Y+ R I P+ ++ L+G G
Sbjct: 204 KAGGEPNAVTYNVLIDGHSKKGRMKE-AYELRDEMRAKGIFPDIYTYTSLLHGECIFGKL 262
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D + ++ E++ G+ N++TY ++ + + R + +Y EMT+ GL+P+ Y SL
Sbjct: 263 DDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSL 322
Query: 185 LRAYGRA 191
+ + +A
Sbjct: 323 VSSLHKA 329
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++ +I GK+ E E MF EM E G + ++ V T +I K T + L
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
E G+ + G L++ + + + E +++
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEIL 93
>gi|302765062|ref|XP_002965952.1| hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii]
gi|300166766|gb|EFJ33372.1| hypothetical protein SELMODRAFT_84012 [Selaginella moellendorffii]
Length = 533
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTM-GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
L +YEE+KA +K N+++Y L+ + G AK +V + +M G+ PN T+ SL+
Sbjct: 300 LRLYEELKAKEIKMNVLSYGTLIQVIFGEAKMLDRVFQMKHDMDSTGIVPNVVTWTSLVG 359
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS----- 241
A + E TL VY++M + G + YN LL+ C D G +D+A ++F + K+
Sbjct: 360 ACSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSACVDGGQSDKAHKLFREWKTSGRIL 419
Query: 242 ------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
SE +PDS +++M+ C K +AEA+ EM+ +G P+
Sbjct: 420 AGIEVQDESAIFSEWVRPDSVAYNTMMRACDKLPK--QAEAVMQEMVSSGLRPDKRSWCI 477
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI YG V+A R+ GI D
Sbjct: 478 LINSYGCNGDKQGAVQAFQRMGRSGIIAD 506
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 4/198 (2%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G+ V++ +++ GV+P+M +Y L+D GR + I++ + G N
Sbjct: 191 GDLQSVFQVFQALESTGVRPDMYSYCILIDACGRCGDAEKATAIFEGLLKAGTVLNVYVC 250
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
S++ A+ A + L +YR+M+ G+ VT YN + C A ++E++K+
Sbjct: 251 NSMMNAH--AGNIQHVLRLYRQMQGSGIAADVTTYNIVFKACRLSKNPVLALRLYEELKA 308
Query: 242 SENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
E + + ++ ++I + K + M ++M G PN+ TSL+ K
Sbjct: 309 KE-IKMNVLSYGTLIQVIFGEAKMLDRVFQMKHDMDSTGIVPNVVTWTSLVGACSKGALV 367
Query: 301 DDVVRALNRLPELGITPD 318
+ ++ + + G TP+
Sbjct: 368 EKTLQVYQDMVQAGCTPN 385
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N ++ D G F++F+ ++S+ +PD +++ +I C G +A A+F +L
Sbjct: 181 NMIMQKFRDQGDLQSVFQVFQALEST-GVRPDMYSYCILIDACGRCGDAEKATAIFEGLL 239
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+AG N++V S++ + A V+R ++ GI D
Sbjct: 240 KAGTVLNVYVCNSMMNAH--AGNIQHVLRLYRQMQGSGIAAD 279
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 91/243 (37%), Gaps = 38/243 (15%)
Query: 4 NLCYSTCSLFSTPKLGRRTFTFSFQRDDSLSFYSKTSLQKRSVSLQETQSSNPT---KHS 60
N+ + C L P L R + ++ ++ S +L + V E + + KH
Sbjct: 284 NIVFKACRLSKNPVLALRLYEELKAKEIKMNVLSYGTLIQ--VIFGEAKMLDRVFQMKHD 341
Query: 61 QNPQYPHGKTGSSPKSYIWVN-PKSPRASKLKEKSYDTRARNEKWRIDPNAFST--LIKL 117
+ TG P W + + L EK+ + PNAF+ L+
Sbjct: 342 MDS------TGIVPNVVTWTSLVGACSKGALVEKTLQVYQDMVQAGCTPNAFTYNFLLSA 395
Query: 118 YGTAGNFDGCLNVYEEMKAIG------------------VKPNMITYNNLLDTMGRA--K 157
G D ++ E K G V+P+ + YN TM RA K
Sbjct: 396 CVDGGQSDKAHKLFREWKTSGRILAGIEVQDESAIFSEWVRPDSVAYN----TMMRACDK 451
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
P Q + + +EM +GL P+ ++ L+ +YG + + ++ M G+ V Y
Sbjct: 452 LPKQAEAVMQEMVSSGLRPDKRSWCILINSYGCNGDKQGAVQAFQRMGRSGIIADVVAYT 511
Query: 218 TLL 220
++
Sbjct: 512 AII 514
>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
Length = 634
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L+K + AG + V M+A G P+++TYN L + W+ +
Sbjct: 221 VRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAE 280
Query: 164 TIYKEMTDN-GLSPNWNTYASLLRAYGR-ARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ EM GL + T+ ++ Y R R GE L R+MK+ G+ +V ++NTLL
Sbjct: 281 ELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGE-ALRCVRQMKDSGVLPNVIVFNTLLK 339
Query: 222 M---CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
D+ D+ + E +PD T+S + S G +++ +F++M+EA
Sbjct: 340 GFLDANDMAAVDDVLGLMEQF----GIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEA 395
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G EP+ V + L + Y +AQ+ + L ++ LG+ P+
Sbjct: 396 GIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPN 435
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 104/248 (41%), Gaps = 13/248 (5%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D F+ LI A N + M G +P T+N L+ G A RP + +
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQR 205
Query: 165 IYKEMTDNG------LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
++ M G + PN TY L++A+ A E+ V M+ G V YNT
Sbjct: 206 VFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNT 265
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLE 277
L + A T A E+ +M + T+ +I CR G++ EA +M +
Sbjct: 266 LASAYAKNDETWRAEELVVEMAQQAGLRTSERTW-GIIVGGYCREGRLGEALRCVRQMKD 324
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
+G PN+ V +L++ + A V L + + GI PD LN ++ +
Sbjct: 325 SGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALS-----SM 379
Query: 338 GKLVECVE 345
G + +C++
Sbjct: 380 GHMAKCMK 387
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+TL+K + A + +V M+ G+KP+++TY++ L+ + + +
Sbjct: 329 PNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKV 388
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + G+ P+ Y+ L + Y RA+ E + R+M G++ +V + T+++
Sbjct: 389 FDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCS 448
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
V A ++ M+ + +P+ TF ++I S + +AE + M +AG P
Sbjct: 449 VADMGNAVRVYAAMRDA-GVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRP 504
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+I + M A+RP Q + ++ + D+G P+ TY +LL A R + +
Sbjct: 79 VIARTRQMRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLA 138
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
E+++ G++ +N L+ + EA F M S C+P + TF+++I
Sbjct: 139 EVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHS-GCRPTASTFNTLIKGYGIA 197
Query: 263 GKVSEAEAMFNEM------LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G+ E++ +F+ M EA PNL L++ + A R ++ R + R+ G
Sbjct: 198 GRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGAD 257
Query: 317 PD 318
PD
Sbjct: 258 PD 259
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 1/219 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+ R + ++ Y G L +MK GV PN+I +N LL A
Sbjct: 287 AQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDAND 346
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
V + M G+ P+ TY+ L A + + V+ +M E G++ +Y+
Sbjct: 347 MAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSI 406
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L ++A E+ M +P+ TF+++I+ + A ++ M +A
Sbjct: 407 LAKGYVRAQQPEKAEELLRQM-GRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDA 465
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G PNL +LI Y + ++ L + + G+ P
Sbjct: 466 GVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRP 504
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G +P+++TY LL + + + + E+ D GL P+ + +L+ A AR +
Sbjct: 109 GHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEA 168
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-----KSSENCQPDSWTF 252
+ + M G + + + +NTL+ G +E+ +F+ M +P+ T+
Sbjct: 169 TNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTY 228
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ ++ G++ EA + M +G +P++ +L Y K D+ RA + E
Sbjct: 229 NILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAK---NDETWRAEELVVE 285
Query: 313 L----GITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+ G+ +R G ++ + + LG+ + CV +
Sbjct: 286 MAQQAGLRTSERTWGIIVGGYCREGR--LGEALRCVRQ 321
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+T+I + + + + VY M+ GV+PN+ T+ L+ K+PW+ +
Sbjct: 432 VRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAE 491
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY 188
+ + M D G+ P TY + A+
Sbjct: 492 EVLQMMQDAGVRPKQTTYCLVADAW 516
>gi|18491213|gb|AAL69509.1| unknown protein [Arabidopsis thaliana]
Length = 320
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
+++ + G + C +++M GV ++ +Y+ +D M ++ +PW+ +YKEM
Sbjct: 67 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 126
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
+ + Y +++RA G ++ E + V+REM+E+G + +V +NT++ + + G +A+
Sbjct: 127 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 186
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
+ ++M CQPDS T+ + + K SE ++F M+ +G P + L++
Sbjct: 187 RMLDEM-PKRGCQPDSITYMCLFSRLE---KPSEILSLFGRMIRSGVRPKMDTYVMLMRK 242
Query: 294 YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ + V+ + E G TPD +++ + Q
Sbjct: 243 FERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQ 280
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ + ++D A++T+I+ G + + + V+ EM+ G +PN+ T+N ++ + R
Sbjct: 123 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 182
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ EM G P+ TY L + R + LS++ M G++ + Y L
Sbjct: 183 RDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVML 239
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G+ +++ MK S + PDS ++++I +G + A EM+E G
Sbjct: 240 MRKFERWGFLQPVLYVWKTMKESGD-TPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 298
Query: 280 FEPN 283
P
Sbjct: 299 LSPR 302
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN +S+L++ Y +G ++ V+ EM G++P+++ Y L+D++ + + +
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M GL PN TY L+ + ++ + V ++M EKG+ V YNTL+
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 224 ADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+DV DEA + E+M +N +P+ TF+S+I G++ +A + M E G
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
NL LI + + + ++ + LG+ PD
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPD 396
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 108 PNAFSTLIKLYGTAGN--FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA S + + + D + + M++ GV+ +++TY L+ + A + +
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM ++G+ PN Y+SLL+ Y ++ ED V+ EM EKG++ V +Y L+
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNL 284
VG +A + DM +P+ T++ +I C C+ G V EA + +M E G P++
Sbjct: 233 VGKAKKAHGVM-DMMVRRGLEPNVVTYNVLIN-CMCKEGSVKEAIGVLKKMSEKGVAPDV 290
Query: 285 FVLTSLIQCYGKAQRTDD 302
+LI+ D+
Sbjct: 291 VTYNTLIKGLSDVLEMDE 308
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+PN ++Y L+ + + Q + + M G+ + TY +L+R A + +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
+ EM E G++ +V +Y++LL G ++ ++F +M S + +PD ++ +I
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM-SEKGIEPDVVMYTGLIDSL 230
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GK +A + + M+ G EPN+ LI C K + + L ++ E G+ PD
Sbjct: 231 CKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 37/256 (14%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+++I+ G V M+ G N++TYN L+ + R + +
Sbjct: 323 VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAM 382
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGR---ARYGEDTLSVYRE----------------M 204
+ EMT GL P+ TY+ L++ + + ED LS R+ M
Sbjct: 383 ELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM 442
Query: 205 KEKGMQ---------------LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
E+GM L V Y+T++ G A E+ + + E PD+
Sbjct: 443 CEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI-VDEGLTPDA 501
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T+S +I + + G + A + +M +GF P++ V SLIQ Y + V+ +
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIRE 561
Query: 310 LPELGITPDDRFCGCL 325
+ I D + L
Sbjct: 562 MITKNIALDSKIISTL 577
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEKSYDTRARN------EKWRIDPNAFSTLIKLYGTAGNF 124
G P+ + ++ P + E+ RARN + +D A+ST+I AG+
Sbjct: 427 GIEPELFHYI----PLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDL 482
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+ + + G+ P+ +TY+ +++ ++ + K+MT +G P+ + SL
Sbjct: 483 KTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSL 542
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ Y L + REM K + L + +TL
Sbjct: 543 IQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 2/228 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+T+I Y G + L + M+ +G++ ++ TYN L + R R K + M
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G++PN+ +Y +L+ + + + ++R+M+ KG + SV YN ++ G
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E F+ + PD +T++ ++ GKV A +F EM G +PN+ T+L
Sbjct: 446 EA-ERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTAL 504
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEEL 337
+ K R+++ + + + G+TPDD L+ + T + K+ L
Sbjct: 505 VSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKDPL 552
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 14/281 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ P + S ++ + +G+ D + +E+ GV N YN+LLD+ R + V +
Sbjct: 146 VTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGL 205
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM + G+ P TY L+ RA +VY EMK K + V Y+ ++
Sbjct: 206 LKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCR 265
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A E+F++ +P+ T+ ++I G++ AE + +M G N
Sbjct: 266 GGNVRRASEVFDEC-VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQI 324
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGI-----TPDDRFCG-CLLNVMTQTPKEELGK 339
V ++I Y + + + + ++GI T + CG C +N M E+ K
Sbjct: 325 VFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRM-----EDAKK 379
Query: 340 LVECVEKSNSKLGYV-VKLLLEEQDIEGDFKKEATELFNSI 379
L+ + + YV L+ EGD EA LF +
Sbjct: 380 LLHIMAEKGVAPNYVSYTTLISIHAKEGDM-VEARRLFRDM 419
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EK + P+ ++ L+ + G D L ++EEMK G KPN++ Y L+ + + R
Sbjct: 455 EKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRS 514
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLL 185
+ +Y +M GL+P+ Y+ L+
Sbjct: 515 EEAFQLYDDMLAAGLTPDDTLYSVLV 540
>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 636
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L+K + AG + V M+A G P+++TYN L + W+ +
Sbjct: 221 VRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAE 280
Query: 164 TIYKEMTDN-GLSPNWNTYASLLRAYGR-ARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ EM GL + T+ ++ Y R R GE L R+MK+ G+ +V ++NTLL
Sbjct: 281 ELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGE-ALRCVRQMKDSGVLPNVIVFNTLLK 339
Query: 222 M---CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
D+ D+ + E +PD T+S + S G +++ +F++M+EA
Sbjct: 340 GFLDANDMAAVDDVLGLMEQF----GIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEA 395
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G EP+ V + L + Y +AQ+ + L ++ LG+ P+
Sbjct: 396 GIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPN 435
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 104/248 (41%), Gaps = 13/248 (5%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D F+ LI A N + M G +P T+N L+ G A RP + +
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQR 205
Query: 165 IYKEMTDNG------LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
++ M G + PN TY L++A+ A E+ V M+ G V YNT
Sbjct: 206 VFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNT 265
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLE 277
L + A T A E+ +M + T+ +I CR G++ EA +M +
Sbjct: 266 LASAYAKNDETWRAEELVVEMAQQAGLRTSERTW-GIIVGGYCREGRLGEALRCVRQMKD 324
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
+G PN+ V +L++ + A V L + + GI PD LN ++ +
Sbjct: 325 SGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALS-----SM 379
Query: 338 GKLVECVE 345
G + +C++
Sbjct: 380 GHMAKCMK 387
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+TL+K + A + +V M+ G+KP+++TY++ L+ + + +
Sbjct: 329 PNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKV 388
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + G+ P+ Y+ L + Y RA+ E + R+M G++ +V + T+++
Sbjct: 389 FDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCS 448
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
V A ++ M+ + +P+ TF ++I S + +AE + M +AG P
Sbjct: 449 VADMGNAVRVYAAMRDA-GVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRP 504
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+I + M A+RP Q + ++ + D+G P+ TY +LL A R + +
Sbjct: 79 VIARTRQMRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLA 138
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
E+++ G++ +N L+ + EA F M S C+P + TF+++I
Sbjct: 139 EVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHS-GCRPTASTFNTLIKGYGIA 197
Query: 263 GKVSEAEAMFNEM------LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G+ E++ +F+ M EA PNL L++ + A R ++ R + R+ G
Sbjct: 198 GRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGAD 257
Query: 317 PD 318
PD
Sbjct: 258 PD 259
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 1/219 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+ R + ++ Y G L +MK GV PN+I +N LL A
Sbjct: 287 AQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDAND 346
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
V + M G+ P+ TY+ L A + + V+ +M E G++ +Y+
Sbjct: 347 MAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSI 406
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L ++A E+ M +P+ TF+++I+ + A ++ M +A
Sbjct: 407 LAKGYVRAQQPEKAEELLRQM-GRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDA 465
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G PNL +LI Y + ++ L + + G+ P
Sbjct: 466 GVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRP 504
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G +P+++TY LL + + + + E+ D GL P+ + +L+ A AR +
Sbjct: 109 GHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEA 168
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-----KSSENCQPDSWTF 252
+ + M G + + + +NTL+ G +E+ +F+ M +P+ T+
Sbjct: 169 TNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTY 228
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ ++ G++ EA + M +G +P++ +L Y K D+ RA + E
Sbjct: 229 NILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAK---NDETWRAEELVVE 285
Query: 313 L----GITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+ G+ +R G ++ + + LG+ + CV +
Sbjct: 286 MAQQAGLRTSERTWGIIVGGYCREGR--LGEALRCVRQ 321
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+T+I + + + + VY M+ GV+PN+ T+ L+ K+PW+ +
Sbjct: 432 VRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAE 491
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAY 188
+ + M D G+ P TY + A+
Sbjct: 492 EVLQMMQDAGVRPKQTTYCLVADAW 516
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD------TMGRAKRPW 160
DP +S L K Y A + + +M +GV+PN++T+ ++ MG A R
Sbjct: 400 DPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVR-- 457
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+Y M D G+ PN T+ +L+ Y + V + M++ G++ T Y +
Sbjct: 458 ----VYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQTTYCLVA 513
Query: 221 AMCADVGYTDEA 232
VG + A
Sbjct: 514 DAWKAVGLVENA 525
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+Y T RI PN +S++I D + V++ M GV PN TY +L
Sbjct: 215 DKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSL 274
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ + + + ++M NG+ PN TY+S + + + ++ M ++G+
Sbjct: 275 VHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGL 334
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +T Y++LL A G E +F+ M S+ QPD + F+++I + +GKV EA
Sbjct: 335 KPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSD-MQPDHYVFNTLIYASAKQGKVDEAM 393
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F++M G +PN +LI Y K R ++ + + G++P+
Sbjct: 394 LVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPN 442
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ST+ G+ D Y EM + PN++TY++++ + + + + +
Sbjct: 196 PNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEV 255
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M NG++PN TY SL+ + + + + +M G++ +V Y++ +
Sbjct: 256 HDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCK 315
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA +IF M +PD T+SS++ + G + E +F+ M+++ +P+ +
Sbjct: 316 NGRCTEARKIFYSM-VKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHY 374
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V +LI K + D+ + +++ G+ P+
Sbjct: 375 VFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPN 407
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G PN+++Y+ + D + + P + Y+EM D + PN TY+S++ A + + +
Sbjct: 193 GCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKA 252
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ V+ M + G+ + Y +L+ G EA + E M S +P+ T+SS +
Sbjct: 253 MEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKM-CSNGVEPNVVTYSSFMD 311
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
G+ +EA +F M++ G +P++ +SL+ Y
Sbjct: 312 YLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGY 348
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 137/314 (43%), Gaps = 10/314 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLN-VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+R++P F+ L+K D ++ V M +G PN+ ++ +L + R +
Sbjct: 121 FRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEA 180
Query: 163 KTIYKEMTDNGLS--PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ M D+G PN +Y+++ + + + YREM ++ + +V Y++++
Sbjct: 181 LELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSII 240
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
A D+A E+ + M + P+ +T++S++ G+++EA +M G
Sbjct: 241 AALCKGQAMDKAMEVHDRMVKN-GVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGV 299
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGK 339
EPN+ +S + K R + + + + G+ PD + L + E+
Sbjct: 300 EPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHG 359
Query: 340 LVECVEKSNSKLG-YVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYC---NCLIDLC 395
L + + +S+ + YV L+ +G EA +F+ + K C N LI+
Sbjct: 360 LFDLMVQSDMQPDHYVFNTLIYASAKQGKV-DEAMLVFSKMRHQGLKPNCVTYNTLINGY 418
Query: 396 VNLNLLENACKLLE 409
+ +ENA L +
Sbjct: 419 CKITRMENALALFQ 432
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI G D + V+ +M+ G+KPN +TYN L++ + R ++
Sbjct: 372 DHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALF 431
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR 190
+EM NG+SPN+ TY +L+ R
Sbjct: 432 QEMVSNGVSPNFITYNIMLQGLFR 455
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 5/179 (2%)
Query: 58 KHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKL 117
K N P+ T SS Y+ N + A K+ Y R K D +S+L+
Sbjct: 293 KMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI---FYSMVKRGLKP--DITTYSSLLHG 347
Query: 118 YGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPN 177
Y G +++ M ++P+ +N L+ + + + ++ +M GL PN
Sbjct: 348 YAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPN 407
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIF 236
TY +L+ Y + E+ L++++EM G+ + YN +L G T A E +
Sbjct: 408 CVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFY 466
>gi|125528270|gb|EAY76384.1| hypothetical protein OsI_04314 [Oryza sativa Indica Group]
Length = 665
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIG----------VKPNMITYNNLLDTMGRAKRPW 160
++T++++YG AG F ++++ M++ +KPN++TYN ++ G++
Sbjct: 344 YNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDE 403
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ ++M NG+ PN TY+++L + +A + ++ +++E G ++ LY T++
Sbjct: 404 KAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMV 463
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G ++ + D+K SE+ + + I I + G+V EA +F +AG
Sbjct: 464 VAYERAGLVSQSKRLLHDLKDSEDVPKE-----TAIKILANAGRVEEAAWLFRRAADAGD 518
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ V +I + K++R V+ + + + G PD +N
Sbjct: 519 VRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSETIAITMN 565
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 30/241 (12%)
Query: 108 PNAFSTLIKLYGTAG------NFDGCLNVY--------------EEMKAIGVKPNMITYN 147
P A + +L G AG ++ + Y +M + GV P+ +Y+
Sbjct: 215 PKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDAESYS 274
Query: 148 NLLDTMGRAKRPWQVKTIYKEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+L + R R +++ M T + P+ + + +L AYG+ + ++ M+
Sbjct: 275 PILAALARRGRHLAAVSLFTHMRTVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRR 334
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN---------CQPDSWTFSSMIT 257
G+ SV YNT+L + D G EA +F M+S+ + +P+ T+++MI
Sbjct: 335 AGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYNTMIA 394
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
I + +A ++ +M G +PN ++++ + KA + D + +L E G
Sbjct: 395 IYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEI 454
Query: 318 D 318
D
Sbjct: 455 D 455
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+AFS TL+ AG+ D L M+ V P+++ ++NL+ R +
Sbjct: 159 VAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLVLFSNLIHLALRGGDAPKAL 218
Query: 164 TIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDT-LSVYREMKEKGMQLSVTLYNTLLA 221
++ + G+ P+ Y + + AY ++ D + +M G+ Y+ +LA
Sbjct: 219 ALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDAESYSPILA 278
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A G A +F M++ +PD F+ ++ EA+ +F M AG
Sbjct: 279 ALARRGRHLAAVSLFTHMRTVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAGVA 338
Query: 282 PNLFVLTSLIQCYGKA 297
P++ ++++ YG A
Sbjct: 339 PSVVTYNTMLRVYGDA 354
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 117/264 (44%), Gaps = 25/264 (9%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMK-AIGVKPNMITYNNLL------DTMGRAKRPWQVK 163
FS LI L G+ L ++ ++ A G+KP++ YN + D + A R
Sbjct: 201 FSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANR----- 255
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG-MQLSVTLYNTLLAM 222
+ +M +G++P+ +Y+ +L A R +S++ M+ ++ ++++N +L
Sbjct: 256 LLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLSVFNIVLNA 315
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG--- 279
+ EA +F M+ + P T+++M+ + G EA +F M A
Sbjct: 316 YGQLDLAREADRLFWSMRRA-GVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDG 374
Query: 280 -------FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+PN+ ++I YGK+ + + + GI P+ +L++ +
Sbjct: 375 SDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKA 434
Query: 333 PK-EELGKLVECVEKSNSKLGYVV 355
K + GKL E + ++ +++ V+
Sbjct: 435 GKLDRAGKLFEKLREAGTEIDPVL 458
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 41/205 (20%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+I YN LL + RA + EM D G++P+ +Y++LL A RA + + L+
Sbjct: 128 LIPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLP 187
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFE----------DMKS----------- 241
M++ + + L++ L+ + G +A +F D+K+
Sbjct: 188 LMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKS 247
Query: 242 ---------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE-AGFEPNLF 285
S+ PD+ ++S ++ + RG+ A ++F M A +P+L
Sbjct: 248 DLLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLS 307
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRL 310
V ++ YG+ D+ R +RL
Sbjct: 308 VFNIVLNAYGQL----DLAREADRL 328
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 52/111 (46%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T IK+ AG + ++ G + Y ++D +++R V ++ EM
Sbjct: 492 TAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKA 551
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
G P+ T A + A+G+ + + ++YR M+E+G S ++ ++++
Sbjct: 552 GSLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLL 602
>gi|115440859|ref|NP_001044709.1| Os01g0833000 [Oryza sativa Japonica Group]
gi|20805252|dbj|BAB92918.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113534240|dbj|BAF06623.1| Os01g0833000 [Oryza sativa Japonica Group]
Length = 665
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIG----------VKPNMITYNNLLDTMGRAKRPW 160
++T++++YG AG F ++++ M++ +KPN++TYN ++ G++
Sbjct: 344 YNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDE 403
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ ++M NG+ PN TY+++L + +A + ++ +++E G ++ LY T++
Sbjct: 404 KAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMV 463
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G ++ + D+K SE+ + + I I + G+V EA +F +AG
Sbjct: 464 VAYERAGLVSQSKRLLHDLKDSEDVPKE-----TAIKILANAGRVEEAAWLFRRAADAGD 518
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ V +I + K++R V+ + + + G PD +N
Sbjct: 519 VRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSETIAITMN 565
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 30/241 (12%)
Query: 108 PNAFSTLIKLYGTAG------NFDGCLNVY--------------EEMKAIGVKPNMITYN 147
P A + +L G AG ++ + Y +M + GV P+ +Y+
Sbjct: 215 PKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDAESYS 274
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+L + R R +++ M + P+ + + +L AYG+ + ++ M+
Sbjct: 275 PILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRR 334
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN---------CQPDSWTFSSMIT 257
G+ SV YNT+L + D G EA +F M+S+ + +P+ T+++MI
Sbjct: 335 AGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYNTMIA 394
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
I + +A ++ +M G +PN ++++ + KA + D + +L E G
Sbjct: 395 IYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEI 454
Query: 318 D 318
D
Sbjct: 455 D 455
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+AFS TL+ AG+ D L M+ V P+++ ++NL+ R +
Sbjct: 159 VAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLVLFSNLIHLALRGGDAPKAL 218
Query: 164 TIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDT-LSVYREMKEKGMQLSVTLYNTLLA 221
++ + G+ P+ Y + + AY ++ D + +M G+ Y+ +LA
Sbjct: 219 ALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDAESYSPILA 278
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A G A +F M++ +PD F+ ++ EA+ +F M AG
Sbjct: 279 ALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAGVA 338
Query: 282 PNLFVLTSLIQCYGKA 297
P++ ++++ YG A
Sbjct: 339 PSVVTYNTMLRVYGDA 354
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 117/264 (44%), Gaps = 25/264 (9%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMK-AIGVKPNMITYNNLL------DTMGRAKRPWQVK 163
FS LI L G+ L ++ ++ A G+KP++ YN + D + A R
Sbjct: 201 FSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANR----- 255
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG-MQLSVTLYNTLLAM 222
+ +M +G++P+ +Y+ +L A R +S++ M+ ++ ++++N +L
Sbjct: 256 LLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNA 315
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG--- 279
+ EA +F M+ + P T+++M+ + G EA +F M A
Sbjct: 316 YGQLDLAREADRLFWSMRRA-GVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDG 374
Query: 280 -------FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+PN+ ++I YGK+ + + + GI P+ +L++ +
Sbjct: 375 SDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKA 434
Query: 333 PK-EELGKLVECVEKSNSKLGYVV 355
K + GKL E + ++ +++ V+
Sbjct: 435 GKLDRAGKLFEKLREAGTEIDPVL 458
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 41/205 (20%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+I YN LL + RA + EM D G++P+ +Y++LL A RA + + L+
Sbjct: 128 LIPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLP 187
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFE----------DMKS----------- 241
M++ + + L++ L+ + G +A +F D+K+
Sbjct: 188 LMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKS 247
Query: 242 ---------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE-AGFEPNLF 285
S+ PD+ ++S ++ + RG+ A ++F M A +P+L
Sbjct: 248 DLLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLS 307
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRL 310
V ++ YG+ D+ R +RL
Sbjct: 308 VFNIVLNAYGQL----DLAREADRL 328
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 52/111 (46%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T IK+ AG + ++ G + Y ++D +++R V ++ EM
Sbjct: 492 TAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKA 551
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
G P+ T A + A+G+ + + ++YR M+E+G S ++ ++++
Sbjct: 552 GSLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLL 602
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+I+PN F++LI + G +++EM + PN++TYN+L++ R +
Sbjct: 321 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 380
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ I+ M P+ TY +L++ + +A+ E+ + ++REM ++G+ + YNTL+
Sbjct: 381 QQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 440
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G D A +IF+ M S+ PD T+S ++ GK+ +A +F + ++ EP
Sbjct: 441 LFQAGDCDMAQKIFKKM-VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 499
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N++ +I+ KA + +D L G+ P+
Sbjct: 500 NIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 108/213 (50%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D S+L+ Y + + ++M +G KP+ +T+N L+ + + + +
Sbjct: 150 DIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALI 209
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G P+ TY +++ + + LS+ ++M++ ++ +V +YNT++
Sbjct: 210 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKY 269
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLF 285
+ D+AF++F M+ ++ +PD +T++S+I+ C C G+ S+A + ++M+E PN+
Sbjct: 270 KHMDDAFDLFNKME-TKGIKPDVFTYNSLIS-CLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI + K + + + + + + I P+
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 124/252 (49%), Gaps = 6/252 (2%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ EK +I+ N ++T+I + D +++ +M+ G+KP++ TYN+L+ +
Sbjct: 246 KMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYG 305
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + +M + ++PN T+ SL+ A+ + + ++ EM ++ + ++ YN
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEML 276
+L+ DEA +IF M S++C PD T++++I C + +V E +F EM
Sbjct: 366 SLINGFCMHDRLDEAQQIFTLM-VSKDCLPDVVTYNTLIKGFCKAK-RVEEGMELFREMS 423
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ G N +LIQ +A D + ++ G+ PD LL+ + + K E
Sbjct: 424 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 483
Query: 337 LGKLV-ECVEKS 347
+V E ++KS
Sbjct: 484 KALVVFEYLQKS 495
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
FS L+ FD +++ E+M+ +G+ N TY+ LL+ R + + +M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM 143
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T +SLL Y + + +++ +M E G + +NTL+
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + + M + CQPD +T+ +++ RG + A ++ +M + E N+ + ++
Sbjct: 204 EAVALIDRM-VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTI 262
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD----DRFCGCLLN 327
I K + DD N++ GI PD + CL N
Sbjct: 263 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCN 303
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLIK + A + + ++ EM G+ N +TYN L+ + +A + I+
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
K+M +G+ P+ TY+ LL G +YG E L V+ +++ M+ ++ YN ++
Sbjct: 455 KKMVSDGVPPDIITYSILLD--GLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMC 512
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++ +++F + S + +P+ +++MI+ +G EA+A+F EM E G P+
Sbjct: 513 KAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571
Query: 285 FVLTSLIQ 292
+LI+
Sbjct: 572 GCYNTLIR 579
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI+ AG+ D ++++M + GV P++ITY+ LLD + + + + +++ +
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 493
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ + PN TY ++ +A ED ++ + KG++ +V +Y T+++ G +
Sbjct: 494 KSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 553
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
EA +F +MK + PDS ++++I G + + + EM GF
Sbjct: 554 EADALFREMK-EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGF 602
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 102 EKWRIDPNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K +++PN ++ I + G AG + +++ + GVKPN+I Y ++ R
Sbjct: 493 QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 552
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS--VYREMKEKGMQLSVTLYN 217
+ +++EM ++G P+ Y +L+RA R R G+ S + +EM+ G + +
Sbjct: 553 EEADALFREMKEDGTLPDSGCYNTLIRA--RLRDGDKAASAELIKEMRSCGFVGDASTIS 610
Query: 218 TLLAMCAD 225
++ M D
Sbjct: 611 MVINMLHD 618
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G + ++ TYN LD + +A +++M G P+ TY+ +LR +A +
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ +++E G++L+V Y+ ++ C D+A EIF+ M + C PD TF+S++
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152
Query: 258 -ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
+CS ++SEA +F M +AG EPN+ ++L+ KA R D+ R + E
Sbjct: 153 GLCSGE-RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 317 PD 318
PD
Sbjct: 212 PD 213
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 129/281 (45%), Gaps = 12/281 (4%)
Query: 27 FQRDDSL-SFYSKTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPK--SYIWVNPK 83
FQR S+ FY +L+ ++ + + +Q G SP +Y +
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383
Query: 84 SPRASKLKEKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
+ KL +++ D K + P++F ++++ AG D L+ E MKA G P
Sbjct: 384 LCKLGKL-DRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++TYN LLD + +A R + T +M +P+ +Y ++ A R+ +++
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+EM ++G+ LY++LL A G D A E+ + + C+PD + M+ C
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK----TSLCKPD-FVMHKMVVDGLC 557
Query: 262 R-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ GK +A + M +AGF + F ++++ K + D
Sbjct: 558 KAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVD 598
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+Y+ + ++ P+ F+ I L G AG D + +++ GVK N+ITY+ ++D
Sbjct: 57 AYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVID 116
Query: 152 TMGRAKRPWQVKTIYKEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+A R I+K M+ G P+ T+ SLL+ + ++ M + G +
Sbjct: 117 GCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCE 176
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+V Y+TLL G DEA ++E+M ++C PD ++S +T +V+EA
Sbjct: 177 PNVISYSTLLDGLCKAGRLDEACRLWEEM-VEKSCVPDLVAYTSFVTGLCKANRVAEACD 235
Query: 271 MFNEMLEAGFEPNLFVLTSLI 291
+M+ G + + +++I
Sbjct: 236 CCRKMVTKGSKADAVAFSTVI 256
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 42/304 (13%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++L+K + ++E M G +PN+I+Y+ LLD + +A R + ++
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + P+ Y S + +A + R+M KG + ++T++ +
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262
Query: 227 GYT-----------------DEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEA 268
G+ DEA + FE+M S N P + F+++I +C + ++ +
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEM-ISRNHPPSAELFNTLIHAVCKSK-RLPDG 320
Query: 269 EAMFNE---MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
+F M E PNL ++ KA++ D+ +N + G++PD L
Sbjct: 321 VLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSAL 380
Query: 326 LNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATE--LFNSISKDV 383
++ + + LGKL + LLEE EG F T+ + N++SK
Sbjct: 381 VDGLCK-----LGKLDRACD------------LLEEMSKEGVFPDSFTDASILNALSKAG 423
Query: 384 KKAY 387
K Y
Sbjct: 424 KVDY 427
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY--- 166
A + +I+ +G D +EEM + P+ +N L+ + ++KR ++
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + PN TY ++ +A+ ++ + EM G+ V Y+ L+ +
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A ++ E+M S E PDS+T +S++ S GKV A + M G P+L
Sbjct: 388 GKLDRACDLLEEM-SKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ KA R D+ + L ++ TPD
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 111 FSTLIKLYGTAGNF-DGCLNVYEEMKAIG---VKPNMITYNNLLDTMGRAKRPWQVKTIY 166
F+TLI + DG L +++ MK++ PN+ TYN ++D + +AK+ + + +
Sbjct: 304 FNTLIHAVCKSKRLPDGVL-LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + GLSP+ TY++L+ + + + EM ++G+ ++L +
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A E MK+ + PD T+++++ G++ EA +M+ A P++F
Sbjct: 423 GKVDYALSHLETMKARGS-TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
T +I ++ + + + G+ PD LL+ + + E+L
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA 533
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 19/241 (7%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNL 149
K K + R +++ +S +I A D L +++ M A G P+++T+N+L
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L + +R + +++ M G PN +Y++LL +A ++ ++ EM EK
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI-CS-------- 260
+ Y + + EA + M ++ + D+ FS++I I C
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKM-VTKGSKADAVAFSTVIGILCKKGHAEEAQ 269
Query: 261 -------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
CR G + EA F EM+ P+ + +LI K++R D V R+
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 313 L 313
+
Sbjct: 330 M 330
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++KG Q SV YN L A A+E F+ M+ PD +T+S ++ G+
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQ-RRGYPPDDFTYSIVLRGLCKAGE 88
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGC 324
+ +A+ + ++ E+G + N+ + +I KA R DD + + G GC
Sbjct: 89 LDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGG--------GC 140
Query: 325 LLNVMT 330
+ +V+T
Sbjct: 141 VPDVVT 146
>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 114/229 (49%), Gaps = 4/229 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +++ + G + C +EEM V ++ +Y+ +D + ++ +PW+ +YKEM
Sbjct: 191 YNMILRGWFKMGWWGKCREFWEEMDRKEVCKDLHSYSIYMDILCKSGKPWKAVKLYKEMK 250
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ + Y +++ A G + + L VYREM+E G Q +V NT++ + + G
Sbjct: 251 SKGIKLDVVAYNTVINAIGLSEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCENGRIK 310
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+++ ++M S PD +T+ C K E +F++M+E G P + L
Sbjct: 311 EAYKMLDEMPQS-YIAPDVFTYHCFF---RCLEKPKEILCLFDQMIENGVCPRMDTYVML 366
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
++ +G+ V ++ +LG +PD+ L++ + Q ++ +
Sbjct: 367 MRKFGRWGFLRPVFLVWKKMEKLGCSPDEFAYNALIDALIQKGMVDMAR 415
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D A++T+I G + D L VY EM+ +G +PN++T N ++ + R +
Sbjct: 255 KLDVVAYNTVINAIGLSEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCENGRIKEAYK 314
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ EM + ++P+ TY R + + + L ++ +M E G+ + Y L+
Sbjct: 315 MLDEMPQSYIAPDVFTYHCFFRCLEKPK---EILCLFDQMIENGVCPRMDTYVMLMRKFG 371
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G+ F +++ M+ C PD + ++++I +G V A EM+ G
Sbjct: 372 RWGFLRPVFLVWKKMEKL-GCSPDEFAYNALIDALIQKGMVDMARKYDEEMMAKGL 426
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 39/225 (17%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYRE 203
TYN ++D +G+ + + M +N S PN T+ L Y A + +SVY +
Sbjct: 82 TYNRMIDILGKFFEFDLSWDLIQRMRNNPFSTPNHTTFRVLFHRYISAHLVNEAVSVYED 141
Query: 204 -MKEKGMQLSVT------------------------------------LYNTLLAMCADV 226
+KE G++ + +YN +L +
Sbjct: 142 RLKEFGLKDETSYCILVDALCEYKHVIEAHELCFGNNNNSINVRNITKIYNMILRGWFKM 201
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ + E +E+M E C+ D ++S + I GK +A ++ EM G + ++
Sbjct: 202 GWWGKCREFWEEMDRKEVCK-DLHSYSIYMDILCKSGKPWKAVKLYKEMKSKGIKLDVVA 260
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++I G ++ D V+R + ELG P+ C ++ ++ +
Sbjct: 261 YNTVINAIGLSEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCE 305
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 10/320 (3%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ + ++ Y A FD V EM+ V P+++T+N ++D RA +
Sbjct: 154 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M GL P TY S+L+ R+ + V++EM + G+ V + L+
Sbjct: 214 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
VG +EA +I+++M+ +PD +FS +I + + RGK+ A A EM G P+
Sbjct: 274 VGEIEEALKIYKEMR-HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVEC 343
+ T +I + +A D +R + + G PD LLN + + + + G L E
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLEN 403
E+ L+ IEG K A +LF+++ + D+ L++
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDK-ALQLFDTMLNQRLRP------DIVTYNTLIDG 445
Query: 404 ACKLLELGLTLEVYTDIQSR 423
C+ +L +++ D+ SR
Sbjct: 446 MCRQGDLDKANDLWDDMHSR 465
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N++ R D ++TLI G+ D +++++M + + PN +TY+ L+D+ +
Sbjct: 429 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 488
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
EM + G+ PN TY S+++ Y R+ ++M + + YNTL+
Sbjct: 489 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 548
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+AF++ +M E QPD T++ +I S G V EA +F +M G
Sbjct: 549 HGYIKEDKMHDAFKLL-NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 607
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
EP+ + S+I + A + + + + + + G PDD+F
Sbjct: 608 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 648
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I + AG L V +EM G P+++TYN LL+ + + +R + +
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
EM + G+ P+ T+ +L+ Y + L ++ M + ++ + YNTL+ MC
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 449
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A ++++DM S E P+ T+S +I +G+V +A +EM+ G PN+
Sbjct: 450 -GDLDKANDLWDDMHSRE-IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 507
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+I+ Y ++ + L ++ ++PD
Sbjct: 508 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 540
>gi|414591617|tpg|DAA42188.1| TPA: hypothetical protein ZEAMMB73_899186 [Zea mays]
Length = 265
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TL+ Y G D L+++ EM G+KP+ I YN ++D + + R K +
Sbjct: 19 DDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFQDGRTVPAKVKF 78
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EMT++G++ + TY +LR + R ++ + +++E++ +++++ NT++A
Sbjct: 79 HEMTESGIAMDKYTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQT 138
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA ++F + S P T+S MIT G V EAE MF+ M AG EPN +
Sbjct: 139 RRVEEAKDLFASISRS-GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 197
Query: 287 LTSLIQCYGKAQRTDDVVRA 306
L +++ + + +++VRA
Sbjct: 198 LNHVVR---ELLKKNEIVRA 214
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ M G+ P+ Y +L+ Y + ++ LS++REM +KG++ S LYN ++
Sbjct: 7 VFDAMVSAGIEPDDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 66
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G T A F +M S D +T++ ++ EA +F E+ + N+
Sbjct: 67 QDGRTVPAKVKFHEMTES-GIAMDKYTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 125
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-TQTPKEELGKLVEC 343
L ++I + +R ++ + G+ P C ++M T KE L + E
Sbjct: 126 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP----CVVTYSIMITNLIKEGLVEEAED 181
Query: 344 VEKS--------NSK-LGYVVKLLLEEQDI 364
+ S NS+ L +VV+ LL++ +I
Sbjct: 182 MFSSMQNAGCEPNSRLLNHVVRELLKKNEI 211
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
E L V+ M G++ +Y TL+ +G DE +F +M + +P + ++
Sbjct: 2 EKALRVFDAMVSAGIEPDDVVYGTLVNGYCKIGRIDEGLSLFREM-LQKGIKPSTILYNI 60
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I G+ A+ F+EM E+G + + +++ K + D+ + L +
Sbjct: 61 IIDGLFQDGRTVPAKVKFHEMTESGIAMDKYTYNIVLRGLFKNRCFDEAIFLFKELRAMN 120
Query: 315 ITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT 373
+ + ++ M QT + EE L + +S V ++ I+ +EA
Sbjct: 121 VKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 180
Query: 374 ELFNSI 379
++F+S+
Sbjct: 181 DMFSSM 186
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 5/198 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI AG D + + +EM GV N++TY L+D + + ++ + + + + M
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ N Y +L+ + + E L + EMK KG++L ++LY L+ +V D
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + M S +P+ +++M+ C GKV EA AM ++L++GF+PN L
Sbjct: 451 EAKSLLTKMDES-GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEA 509
Query: 291 IQCYG----KAQRTDDVV 304
+Q + K D VV
Sbjct: 510 VQLFNEMVHKGMSLDKVV 527
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 22/284 (7%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCL--NVYEEMKAIGVKPNMITYNNLLDTMGRA 156
AR + R+ PN + L A + G L ++E++ A PN+ T+N ++D + +
Sbjct: 146 ARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKE 201
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ ++++ M + G P+ T+ SL+ YG+ ++ + EM+ G + V Y
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTY 261
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N L+ G + A+ F MK E + TFS+ + G V EA +F +M
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMK-REGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMR 320
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--- 333
G N F T LI KA R DD + L+ + G+ LNV+T T
Sbjct: 321 VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP---------LNVVTYTVLVD 371
Query: 334 ---KEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATE 374
KE E V + K G LL I G F + +E
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 119/251 (47%), Gaps = 4/251 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++LI YG G D + EEM+ G K +++TYN L++ + R +
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYF 281
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ N T+++ + A+ + + + ++ +M+ +GM L+ Y L+
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D+A + ++M + + T++ ++ +C R KV+EAE + M +AG N
Sbjct: 342 GRLDDAIVLLDEM-VRQGVPLNVVTYTVLVDGLCKER-KVAEAEDVLRMMEKAGVRANEL 399
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
+ T+LI + + ++ + L+ + G+ D G L+ + K +E L+ +
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 345 EKSNSKLGYVV 355
++S + Y++
Sbjct: 460 DESGLEPNYII 470
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 113/240 (47%), Gaps = 7/240 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ +I G +++ MK +G P+++T+N+L+D G+ +V+ +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
+EM +G + TY +L+ + + E + MK +G+ +V ++T + A C
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G EA ++F M+ + +T++ +I G++ +A + +EM+ G N+
Sbjct: 306 E-GLVREAMKLFAQMR-VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL--NVMTQTPKEELGKLVE 342
T L+ K ++ + L + + G+ ++ L+ + M + ++ LG L E
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA-KR 158
+N+ +D + + LI+ D ++ +M G++PN I Y ++D ++ K
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 159 PWQVKTIYK---------------------EMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
P + + K EM G+S + Y +LL Y + D
Sbjct: 485 PEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 544
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++ +M + G+QL + Y ++ ++ EA E+F +M PD ++ +IT
Sbjct: 545 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM-IGHGIAPDRAVYNCLIT 603
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 109/203 (53%), Gaps = 6/203 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + TL+ Y G D L+++ EM G+KP+ I Y+ ++D + A R K
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EMT++G++ + TY +LR + R ++ + +++E++ +++++ NT++
Sbjct: 628 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 687
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++F + S P T+S MIT G V EAE MF+ M AG EPN
Sbjct: 688 FQTRRVEEAKDLFASISRSR-LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746
Query: 284 LFVLTSLIQCYGKAQRTDDVVRA 306
+L +++ + + +++VRA
Sbjct: 747 SRLLNHVVR---ELLKKNEIVRA 766
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 144/309 (46%), Gaps = 22/309 (7%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN A++T+I + G+ + ++++EM G+ P+++TYN+++ + +A+ + +
Sbjct: 220 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 279
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M + + PN TY +L+ Y ++ + V++EM+ + V + L+
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++F+ M + + PD ++++ M+ + +G + + +F+ ML G P+ +
Sbjct: 340 YGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 398
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
LI+ Y D + N + + G+ PD ++ + + +GK+ + +E
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR-----IGKMDDAME 453
Query: 346 KSNSKLG-------YVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNL 398
K N + Y L++ G K A EL + I + +D+
Sbjct: 454 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK-AKELISEIMNNGMH------LDIVFFS 506
Query: 399 NLLENACKL 407
+++ N CKL
Sbjct: 507 SIINNLCKL 515
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 47/271 (17%)
Query: 88 SKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCL----NVYEEMKAIGVKP 141
K+KE +DT A + +P+ FS I L G A GCL ++++ M G+ P
Sbjct: 341 GKIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATK--GCLVDMTDLFDLMLGDGIAP 395
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+ T+N L+ + I+ EM D+G+ P+ TY +++ A R +D + +
Sbjct: 396 DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 455
Query: 202 REMKEK-----------------------------------GMQLSVTLYNTLLAMCADV 226
+M ++ GM L + +++++ +
Sbjct: 456 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKL 515
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A IF D+ + PD+ ++ ++ GK+ +A +F+ M+ AG EPN+
Sbjct: 516 GRVMDAQNIF-DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+L+ Y K R D+ + + + GI P
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKP 605
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 4/235 (1%)
Query: 71 GSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G +P Y + + S LK K + N +D FS++I G
Sbjct: 462 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA 521
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
N+++ +G+ P+ + YN L+D + + ++ M G+ PN Y +L+
Sbjct: 522 QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 581
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + ++ LS++REM ++G++ S LY+ ++ + G T A F +M S
Sbjct: 582 YCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTES-GIAM 640
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
D T++ ++ EA +F E+ + N+ L ++I + +R ++
Sbjct: 641 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 695
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
LSP +TYA L+ RA E L+ + ++ G+++++ + N LL + TDEA
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF--EPNLFVLTSLI 291
+I C PD +++S ++ +GK +A+ + M E G PN+ ++I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
+ K + + + GI PD
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPD 256
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT-DNGLSPNWNTYASLLR 186
L + ++ G++ N+I N+LL+ AKR + I T + G P+ +Y+ LL+
Sbjct: 134 LAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLK 193
Query: 187 AY---GRARYGEDTLSVYREMKEKGMQLS--VTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ G++ +D L R M E G S V YNT++ G ++A ++F++M
Sbjct: 194 SLCDQGKSGQADDLL---RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM-V 249
Query: 242 SENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
PD T++S++ +C R + +AEA +M+ PN + +LI Y +
Sbjct: 250 QRGIPPDLVTYNSVVHALCKARA-MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 308
Query: 301 DDVVRALNRLPELGITPD 318
+ VR + I PD
Sbjct: 309 KEAVRVFKEMRRHSILPD 326
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P TY L+D RA RP + ++ GL N LL + A+ ++ L
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 199 SVY-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMI 256
+ E G V Y+ LL D G + +A ++ M + C P+ ++++I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G V++A +F EM++ G P+L S++ KA+ D L ++ +
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289
Query: 317 PDD 319
P++
Sbjct: 290 PNN 292
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 2/233 (0%)
Query: 88 SKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K KE KS T RN + D + ++T+I + G L + EMK +KPN+ITY
Sbjct: 568 GKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+ + + K + EM G SP+ T+ +L+A ++R + L ++ M
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ +T+YNTLL + G T +A + E+M S PD+ TF+++I +
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS-GIAPDTITFNALILGHCKSSHLD 746
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
A A + +ML PN+ +L+ R + L + + G+ P++
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 3/199 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++TLI Y G+ L+V + M A G+ +++ YN L+ RA + + +
Sbjct: 167 LDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGV 226
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCA 224
M + G+ PN TY + Y R + E+ +Y M G+ L V + L+A +C
Sbjct: 227 LDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR 286
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D G EA+ +F +M P+ T+ ++I + G+ E ++ EM+ G +L
Sbjct: 287 D-GRFSEAYALFREMDKV-GAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDL 344
Query: 285 FVLTSLIQCYGKAQRTDDV 303
T+L+ GK +TD+V
Sbjct: 345 VTYTALMDWLGKQGKTDEV 363
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI + + + D Y +M + PN+ T+N LL + R + T+
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +GL PN TY L+ +G+ + + +Y EM KG V+ YN L++
Sbjct: 788 IEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E+F+DM+ P S T+ +++ S +E + +M E GF P+
Sbjct: 848 GMMTQAKELFKDMQ-KRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
L+ + + + K T R L L
Sbjct: 907 LSFICRAFSKPGMTWQAQRLLKNL 930
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 10/305 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y+ RN +D S L+ G F ++ EM +G PN +TY L+D++
Sbjct: 262 YEGMVRNGVL-LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLA 320
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+A R ++ ++ EM G+ + TY +L+ G+ ++ R + L+
Sbjct: 321 KAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGV 380
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
Y L+ DEA ++ +M+ ++ P+ TFSS+I RG + +A
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEME-EKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
M E G PN+ +LI + K Q D + + + G+ + L+N + Q K
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGK 499
Query: 335 -EELGKLVECVEKSNSKLGYV-----VKLLLEEQDIEGDFKKEATELFNSISKD--VKKA 386
EE L + S L +V + L + D+ FK + ++ D V
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559
Query: 387 YCNCL 391
+ NCL
Sbjct: 560 FINCL 564
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A +D ++TLI AG+ +E+ + P+ + YN ++ + +
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGK 569
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ K+I EM + GL P+ +TY +++ ++ R L + EMK ++ ++ YNT
Sbjct: 570 FKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNT 629
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+A G ++A + +M S+ P S T ++ CS ++ + M+ A
Sbjct: 630 LVAGLFGTGAVEKAKYLLNEMVSA-GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNA 688
Query: 279 GFEPNLFVLTSLIQ--CYGKAQRTDDVVRALNRLPELGITPD 318
G ++ V +L+Q CY R VV L + GI PD
Sbjct: 689 GLHADITVYNTLLQVLCYHGMTRKATVV--LEEMLGSGIAPD 728
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 125/277 (45%), Gaps = 38/277 (13%)
Query: 90 LKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L +K+ + + ++ I+PN + TLI + D L VY +M GV+ N +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVD 488
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA-------RYGEDTL-- 198
+L++ + + + + ++K+ + +GLS + Y +L+ +A ++G++ +
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 199 --------------------------SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
S+ EM+ G++ + YNT++ G T +A
Sbjct: 549 NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
++ +MK S + +P+ T+++++ G V +A+ + NEM+ AGF P+ ++Q
Sbjct: 609 LKLLHEMKMS-SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+++R D ++ + G+ D LL V+
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 9/165 (5%)
Query: 140 KPNMITYNNLLDTMG-RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+P + YN LL + A P + EM G+ + T +LL G R G+
Sbjct: 100 RPTTVAYNILLAALSDHAHAP----AVLAEMCKRGVPFDGVTVNTLLA--GLCRNGQVDA 153
Query: 199 SVYREMKEKGMQ-LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ + G+ L V +NTL+A VG T A + + M +++ D +++++
Sbjct: 154 AAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRM-TAQGLPMDVVGYNTLVA 212
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
G+V A + + M EAG +PN+ T I Y + + ++
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257
>gi|125572530|gb|EAZ14045.1| hypothetical protein OsJ_03970 [Oryza sativa Japonica Group]
Length = 665
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIG----------VKPNMITYNNLLDTMGRAKRPW 160
++T++++YG AG F ++++ M++ +KPN++TYN ++ G++
Sbjct: 344 YNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDE 403
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ ++M NG+ PN TY+++L + +A + ++ +++E G ++ LY T++
Sbjct: 404 KAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMV 463
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G ++ + D+K SE+ + + I I + G+V EA +F +AG
Sbjct: 464 VAYERAGLVSQSKRLLHDLKDSEDVPKE-----TAIKILANAGRVEEAAWLFRRAADAGD 518
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ V +I + K++R V+ + + + G PD +N
Sbjct: 519 VRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGSLPDSETIAITMN 565
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 104/241 (43%), Gaps = 30/241 (12%)
Query: 108 PNAFSTLIKLYGTAG------NFDGCLNVY--------------EEMKAIGVKPNMITYN 147
P A + +L G AG ++ + Y +M + GV P+ +Y+
Sbjct: 215 PKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDAESYS 274
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+L + R R +++ M + P+ + + +L AYG+ + ++ M+
Sbjct: 275 PILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRR 334
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN---------CQPDSWTFSSMIT 257
G+ SV YNT+L + D G EA +F M+S+ + +P+ T+++MI
Sbjct: 335 AGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYNTMIA 394
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
I + +A ++ +M G +PN ++++ + KA + D + +L E G
Sbjct: 395 IYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEI 454
Query: 318 D 318
D
Sbjct: 455 D 455
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+AFS TL+ AG+ D L M+ V P+++ ++NL+ R +
Sbjct: 159 VAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLVLFSNLIHLALRGGDAPKAL 218
Query: 164 TIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDT-LSVYREMKEKGMQLSVTLYNTLLA 221
++ + G+ P+ Y + + AY ++ D + +M G+ Y+ +LA
Sbjct: 219 ALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDAESYSPILA 278
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A G A +F M++ +PD F+ ++ EA+ +F M AG
Sbjct: 279 ALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAGVA 338
Query: 282 PNLFVLTSLIQCYGKA 297
P++ ++++ YG A
Sbjct: 339 PSVVTYNTMLRVYGDA 354
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 117/264 (44%), Gaps = 25/264 (9%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMK-AIGVKPNMITYNNLL------DTMGRAKRPWQVK 163
FS LI L G+ L ++ ++ A G+KP++ YN + D + A R
Sbjct: 201 FSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANR----- 255
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG-MQLSVTLYNTLLAM 222
+ +M +G++P+ +Y+ +L A R +S++ M+ ++ ++++N +L
Sbjct: 256 LLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNA 315
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG--- 279
+ EA +F M+ + P T+++M+ + G EA +F M A
Sbjct: 316 YGQLDLAREADRLFWSMRRA-GVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDG 374
Query: 280 -------FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+PN+ ++I YGK+ + + + GI P+ +L++ +
Sbjct: 375 SDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKA 434
Query: 333 PK-EELGKLVECVEKSNSKLGYVV 355
K + GKL E + ++ +++ V+
Sbjct: 435 GKLDRAGKLFEKLREAGTEIDPVL 458
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+I YN LL + R + EM D G++P+ +Y++LL A RA + + L+
Sbjct: 128 LIPYNLLLRSACRPGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLP 187
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFE----------DMKS----------- 241
M++ + + L++ L+ + G +A +F D+K+
Sbjct: 188 LMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKS 247
Query: 242 ---------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE-AGFEPNLF 285
S+ PD+ ++S ++ + RG+ A ++F M A +P+L
Sbjct: 248 DLLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLS 307
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRL 310
V ++ YG+ D+ R +RL
Sbjct: 308 VFNIVLNAYGQL----DLAREADRL 328
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 52/111 (46%)
Query: 113 TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDN 172
T IK+ AG + ++ G + Y ++D +++R V ++ EM
Sbjct: 492 TAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKA 551
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
G P+ T A + A+G+ + + ++YR M+E+G S ++ ++++
Sbjct: 552 GSLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLL 602
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 139/283 (49%), Gaps = 14/283 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPWQV 162
+D A + L+ G+ V++EM +G+ PN +TY L+ T G+ ++ +
Sbjct: 36 LDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGF-- 93
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+++EM G+ PN TY L+ + R E S++ EM +G+ +V YNTL+A
Sbjct: 94 -ALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAG 152
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G +A ++ DM +E +P TF+ ++ GK+S A FN+M AGF+P
Sbjct: 153 LCRHGKLWDAAKLL-DMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQP 211
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
+ LI + +A+ RAL+ + E G+ P L++ + + +GK E
Sbjct: 212 SAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR--ENHMGKAFE 269
Query: 343 C---VEKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+EK+ ++ + +L+ +EG+ K+A +LF S+ +
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNM-KDARKLFQSMGE 311
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++TLI G + + M+ G +P++IT+N L+D G+A + + +M
Sbjct: 145 SYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM 204
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P+ TY L+ + RAR +MKE+G++ + Y L+ A +
Sbjct: 205 KAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHM 264
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+AFEI M+ + + D+ T+ ++ G + +A +F M E G EP+ +
Sbjct: 265 GKAFEILAGMEKA-GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
+I YG+ + ++ + + + G+ P+ G + V+ + K +E L++ +E
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIR 383
Query: 349 SKLGYVVKLLLEEQDIEGDFKKEATELF 376
S G+ + + D + + + TE F
Sbjct: 384 SFAGHHQNFIASKSDSQQKDEDKCTEHF 411
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R E R F+ L+ YG AG L + +MKA G +P+ +TYN L+ RA+
Sbjct: 170 RTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDM 229
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +M + GL P TY L+ ++ R + + M++ G+++ Y L
Sbjct: 230 TRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVL 289
Query: 220 L-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ A+C + G +A ++F+ M + +P + + MI G +A + EM +
Sbjct: 290 VRALCME-GNMKDARKLFQSM-GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347
Query: 279 GFEPN 283
G PN
Sbjct: 348 GLIPN 352
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 93 KSYDTRARNEK--WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K+++ A EK +D + + L++ GN +++ M GV+P+ + Y+ ++
Sbjct: 266 KAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMI 325
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
GR ++ + EM GL PN +Y +R
Sbjct: 326 YGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIR 361
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 111/215 (51%), Gaps = 3/215 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN +++LI + D L + EEM A G P++ITYN L+D + + R +
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 342
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ +M +P+ TY+ L+ + + + +++ +M ++ + V ++TL+
Sbjct: 343 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G D+A + E+M +S +C PD +T++S++ G++ EA + M + G +PN
Sbjct: 403 CNAGLVDDAERLLEEMVAS-DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPN 461
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ T+LI + +A + + L + G+ P+
Sbjct: 462 VVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPN 496
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+STLI G D ++E+M+ +P+++T+ L+D + + R + + +
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
+ M D +PN TY+SL+ + D V++ M +G++ +V YN+L+ C
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A + E+M ++ C PD T++++I G+ EA +F +M P++
Sbjct: 301 NG-VDSALLLMEEMTAT-GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 358
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI + K +R D + + + + PD
Sbjct: 359 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPD 391
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 7/216 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FSTL++ Y AG D + EEM A P++ TY +L+D + R + + +
Sbjct: 391 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 450
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M G PN TY +L+ A+ RA + EM G+Q +V Y +L+
Sbjct: 451 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGT 510
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA ++ E ++ ENC+ D + + M+ G++S A + + ++G P +
Sbjct: 511 GDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 570
Query: 287 LTSLIQ--CYGKAQRTDDVVRALNRLPELGITPDDR 320
+LI+ C GK ++ +A+ L E+ ++ R
Sbjct: 571 YVALIRGLCQGK-----ELGKAMEVLEEMTLSRKSR 601
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ +MK G PN TYN L++ + + + + KEM ++GL+PN TY++++ + R
Sbjct: 30 FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCR 89
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ ++R+M E G ++ YNTLL+ G DEA+E+ ++M+ QPD +
Sbjct: 90 QTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR-ERGLQPDKF 148
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
++ +++ GK+ A +F + P++ ++LI K R D+ + ++
Sbjct: 149 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM 208
Query: 311 PELGITPD 318
E PD
Sbjct: 209 RENSCEPD 216
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN +ST+I + D ++ +M G PN++TYN LL + R + +
Sbjct: 75 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 134
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM + GL P+ +Y +L+ + + L V+ + V Y+TL+A
Sbjct: 135 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 194
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNL 284
G DEA ++FE M+ + +C+PD TF++++ C+G ++ EA+ + M + PN+
Sbjct: 195 TGRLDEACKLFEKMREN-SCEPDVVTFTALMD-GLCKGDRLQEAQQVLETMEDRNCTPNV 252
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+SLI K + D R+ GI P+
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 286
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 135/302 (44%), Gaps = 8/302 (2%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
N+IT+ ++D + +A R + T + +M G PN TY L+ + + +
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+EMKE G+ +V Y+T++ D A+++F M + C P+ T++++++
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVTYNTLLSGLCR 124
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G + EA + +EM E G +P+ F +L+ K + D ++ PD
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184
Query: 322 CGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSIS 380
L+ + +T + +E KL E + +++ + V L + +GD +EA ++ ++
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244
Query: 381 KDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLSLGAA 440
NC ++ +L++ CK ++ EV+ + R + SL G
Sbjct: 245 DR------NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 298
Query: 441 LT 442
+T
Sbjct: 299 MT 300
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 36/206 (17%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++L+ + G V + M G +PN++TY L+D RA +P +
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLL 485
Query: 167 KEMTDNGLSPNWNTYASLLRAY----------------------------------GRAR 192
+EM NG+ PN TY SL+ + G R
Sbjct: 486 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCR 545
Query: 193 YGE--DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
G L + +K+ G +Y L+ +A E+ E+M S +P++
Sbjct: 546 TGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAE 605
Query: 251 TFSSMITICSCRGKVSEAEAMFNEML 276
+ ++I + G+ EA A+ +E+L
Sbjct: 606 AYEAVIQELAREGRHEEANALADELL 631
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%), Gaps = 6/256 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TLI + GN D + ++ +M P++ TYN L+D + +RP +
Sbjct: 269 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 328
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM G PN+ TY +L+ + ++ D ++ + M + + S +N ++ M
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNL 284
VG D A+E+F+ M + C PD +T++ MI+ +CR ++ +A + M EAG P++
Sbjct: 389 VGQLDLAYELFQLM-TDRGCLPDIYTYNIMIS-GACRANRIDDARQLLERMTEAGCPPDV 446
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVEC 343
S++ KA + D+ L G D C L++ + ++ + ++ KL+
Sbjct: 447 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 506
Query: 344 VEKSNSKLGYVVKLLL 359
+E++ S V +L
Sbjct: 507 MERNGSAPDVVAYTIL 522
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ E+M G PN++TYN L++ + + ++ +M +N SP+ TY L+ Y
Sbjct: 258 ILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYC 317
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ +D + +EM + G + + YNTL+ G +AF + + M +C+P
Sbjct: 318 KQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ-MMLRRDCKPSH 376
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+TF+ MI + G++ A +F M + G P+++ +I +A R DD + L R
Sbjct: 377 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 436
Query: 310 LPELGITPD 318
+ E G PD
Sbjct: 437 MTEAGCPPD 445
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 2/181 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G K + T N LL R K+ + ++K SP+ TY++L+ + +AR +
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ EM+++G+ +YNT++ D G D A + DM+ NC P T++ ++
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ--RNCAPSVITYTILVD 244
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++S+A + +M+EAG PN+ +LI + K D+ V N++ E +P
Sbjct: 245 ALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSP 304
Query: 318 D 318
D
Sbjct: 305 D 305
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++ LI + A D L + EM G P +ITY+ ++D + ++ R +
Sbjct: 515 DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLL 574
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + G++P+ Y S++ ++ ++ +Y+ MK+ G +V YN L+ V
Sbjct: 575 KTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKV 634
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DEA + E M+ S+ C PD+ T++S+ + +A +F M G P F+
Sbjct: 635 SRLDEAIHLLEVME-SDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFM 693
Query: 287 LTSLI 291
+ L+
Sbjct: 694 YSLLL 698
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 62 NPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYG 119
P Y H K + +V K +++YD + P++ +STLI +
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKK------AQEAYDLFKNHRCGLCSPDSITYSTLINGFC 178
Query: 120 TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
A +F + +EM+ G+ P+ YN ++ + R Y++M N +P+
Sbjct: 179 KARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVI 237
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
TY L+ A ++ D + +M E G +V YNTL+ +G DEA +F M
Sbjct: 238 TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 297
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ +C PD +T++ +I + + + + EM++ G EPN +L+ K+ +
Sbjct: 298 LEN-SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 356
Query: 300 TDD 302
D
Sbjct: 357 YID 359
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 3/212 (1%)
Query: 108 PNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ ++ I + G A D + E M G P+++TYN+++ + +A + + +
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y+ + + G + T ++L+ ++R +D + REM+ G V Y L+
Sbjct: 469 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 528
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D++ F +M + C P T+S +I +V + + MLE G P+
Sbjct: 529 ADQLDKSLAFFSEML-DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
V TS+I K+ D+ + + G P
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTGCAP 619
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN + +D STLI + D + EM+ G P+++ Y L+ +A +
Sbjct: 473 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 532
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM D G P TY+ ++ ++ D + + M E+G+ +Y ++
Sbjct: 533 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSV 592
Query: 220 L-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ +C Y DEA+E+++ MK + C P T++ ++ ++ EA + M
Sbjct: 593 IDGLCKSDSY-DEAYELYKLMKQT-GCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESD 650
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G P+ S+ + K+ D R + G +P
Sbjct: 651 GCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSP 689
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++++ A D VYE ++ G +++T + L+D + +++R + +
Sbjct: 445 DVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL 504
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM NG +P+ Y L+ + +A + +L+ + EM +KG +V Y+ ++
Sbjct: 505 REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKS 564
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+ + + M PD+ ++S+I EA ++ M + G P +
Sbjct: 565 ARVRDGCMLLKTML-ERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVT 623
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ K R D+ + L + G PD
Sbjct: 624 YNVLVDKLCKVSRLDEAIHLLEVMESDGCLPD 655
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 28/328 (8%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+A + LIK +G G + L V+ +MK G++P + TYN L++ + A + +++
Sbjct: 170 SAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEV 229
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + P+ TY ++++ Y +A + + R+M+ +G + Y T++ C Y
Sbjct: 230 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC----Y 285
Query: 229 TDEAF----EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
D F ++++M + Q FS +I GK++E +F M+ G +PN+
Sbjct: 286 ADSDFGSCVALYQEM-DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 344
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
+ T LI Y K+ +D +R L+R+ + G PD ++N + + G++ E +
Sbjct: 345 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKN-----GRVEEAL 399
Query: 345 EKSNSKL--GYVVKLLLEEQDIEGDFK----KEATELFNSISKD--VKKAYC-NCLIDLC 395
+ ++ G + + I+G K EA LF +S+ + +YC N LID
Sbjct: 400 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 459
Query: 396 VNLNLLENACKLL-----ELGLTLEVYT 418
++ A L E G VYT
Sbjct: 460 TKHRKVDEAIALFKRMEEEEGCDQTVYT 487
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++ P+AFS +I G + V+E M G KPN+ Y L+D ++
Sbjct: 306 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 365
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ M D G P+ TY+ ++ + E+ L + + G+ ++ Y++L+
Sbjct: 366 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 425
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM-LEAGFEPN 283
G DEA +FE+M S + C DS+ ++++I + KV EA A+F M E G +
Sbjct: 426 KAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 484
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++ T L+ K R ++ ++ + + + GITP
Sbjct: 485 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 518
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 3/229 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI Y +G+ + + + M G KP+++TY+ +++ + + R +
Sbjct: 342 PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY 401
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +GL+ N Y+SL+ G+A ++ ++ EM EKG YN L+
Sbjct: 402 FHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 461
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
DEA +F+ M+ E C +T++ +++ + EA +++ M++ G P
Sbjct: 462 HRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAA 521
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+L + + + L+ L +G+ D C ++N + + +
Sbjct: 522 CFRALSTGLCLSGKVARACKILDELAPMGVILDAA-CEDMINTLCKAGR 569
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R +E ++ D +S ++ G + L+ + + G+ N + Y++L+D +G+A
Sbjct: 369 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 428
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLY 216
R + + +++EM++ G + + Y +L+ A+ + R ++ +++++ M +E+G +V Y
Sbjct: 429 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 488
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
LL+ +EA +++ DM + P + F ++ T GKV+ A + +E+
Sbjct: 489 TILLSGMFKEHRNEEALKLW-DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA 547
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
G + +I KA R + + + + E G R ++N + + K +
Sbjct: 548 PMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKAD 606
Query: 337 LG 338
L
Sbjct: 607 LA 608
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 112/232 (48%), Gaps = 2/232 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ + F +++ Y A + +E+M + G+K ++ YN L+D + ++K+ + I
Sbjct: 193 LSKDTFRLIVRRYARARKVKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAI 252
Query: 166 YKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+KEM NG P+ TY L+ +G + SVY+EM + G++ V Y TL++
Sbjct: 253 FKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFC 312
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G DEA ++F +M+++ C P + +I ++ EA F +GF +
Sbjct: 313 KSGKCDEAIKVFREMEAN-GCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEV 371
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+++ Y ++ + + ++ + + GI P+ R +L + ++ K E
Sbjct: 372 PTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIE 423
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN ++ D ++ L++ +G + +VY+EM G+KP+++ Y L+ + ++ +
Sbjct: 258 RNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKC 317
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++EM NG P+ + Y L+ G ++ L + K G + V N +
Sbjct: 318 DEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAV 377
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ AF++ ++M+ + P++ T+ ++ K+ EA +F M G
Sbjct: 378 VGAYCRSSKFQHAFKMVDEMRKT-GIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEG 436
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
EP L T ++ + +R D ++ ++ E G+ P L+N
Sbjct: 437 CEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLIN 484
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 1/175 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ + LI G+ D L +E KA G + T N ++ R+ + +
Sbjct: 336 PHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVD 395
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G+ PN TY +L+ +++ E+ +V++ M +G + + Y ++ M
Sbjct: 396 EMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNE 455
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
D A ++++ MK + P FSS+I ++ EA F EML+ G P
Sbjct: 456 RVDMALKVWKQMKE-KGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRP 509
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ ++ Y + F + +EM+ G+ PN TY+ +L + ++++ + +++ M
Sbjct: 375 NAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGM 434
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
G P NTY ++ + + L V+++MKEKG+ + ++++L+ +E
Sbjct: 435 EGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEE 494
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
A F++M + +P FS++ G++S A+ M
Sbjct: 495 ACVYFQEM-LDKGIRPPGQLFSNLKEALIEGGRISLAQDM 533
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 69 KTGSSP--KSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDP--NAFSTLIKLYGTAGNF 124
KTG P ++Y + ++ K++E +Y+ R +P N ++ ++ ++ +
Sbjct: 399 KTGIGPNARTYDIILQYLIKSQKIEE-AYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERV 457
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D L V+++MK GV P M +++L++ + R + ++EM D G+ P +++L
Sbjct: 458 DMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNL 517
Query: 185 LRAY---GRARYGED 196
A GR +D
Sbjct: 518 KEALIEGGRISLAQD 532
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 154/344 (44%), Gaps = 17/344 (4%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
RAR E + ++FS +I +G G F ++++ M + GV PN+ITYN+++D + +
Sbjct: 238 RARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGE 297
Query: 158 RPWQVKT-IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ V Y EM NGL P+ TY SLL E + EM + + V Y
Sbjct: 298 VSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTY 357
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NT L G D A +FE+M SS+ P+ T+S+M+ + + +A ++ EM
Sbjct: 358 NTYLDTLCKAGQIDLARRVFEEM-SSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMK 416
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-E 335
+ +L+ Y K D+ + + GI D LL+ + +
Sbjct: 417 LRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYD 476
Query: 336 ELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK---DVKKAYCNCLI 392
E+ +L E ++ N + + + +G+ +EA +++ ++ + + +I
Sbjct: 477 EVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAII 536
Query: 393 D-LCVNLNLLENACKLL----ELGLTLEVYT-----DIQSRSPT 426
D LC N L+E++ LL E G+ V T D +SPT
Sbjct: 537 DTLCKN-GLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPT 579
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 12/259 (4%)
Query: 92 EKSYDTRARNEKWRIDPNAF-STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
+K +D + R+D S +I G G + L ++E + G + +++ ++
Sbjct: 196 KKCFDFIMSKQNGRVDKGKLVSAMIGTLGRLGEINLALGLFERARLEGYGSTVHSFSAMI 255
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED-TLSVYREMKEKGM 209
GR R +++ M+ G+ PN TY S++ A + D + Y EM G+
Sbjct: 256 SAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGL 315
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC-QPDSWTFSSMI-TICSCRGKVSE 267
YN+LL++CA G + A ++ +M C PD +T+++ + T+C G++
Sbjct: 316 MPDRLTYNSLLSVCASKGMWEMAQKLLSEM--DHRCIVPDVFTYNTYLDTLCKA-GQIDL 372
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
A +F EM PN+ ++++ Y KA +D + + + D L+
Sbjct: 373 ARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVG 432
Query: 328 VMTQTPKEELGKLVECVEK 346
+ E+LG L E +EK
Sbjct: 433 IY-----EKLGNLDEAIEK 446
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 3/229 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI AGN + + +++M G++PN +TY +L++ + + I+
Sbjct: 342 DVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIW 401
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM +G P TY +LL + + E+ + + R M+ KG+ V Y+T++A
Sbjct: 402 DEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRY 461
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D AF++ +M + PD+ T+SS+I +C R +++EA +F EML P+ F
Sbjct: 462 QELDRAFQMNAEM-VEKGVSPDAITYSSLIQGLCEQR-RLNEACDLFQEMLNKSLLPDEF 519
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
TSLI Y K ++ + + + + G PD L+N + + +
Sbjct: 520 TYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQAR 568
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 2/235 (0%)
Query: 86 RASKLKEKSYDTRARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
R +++E S + K + D ++TL+ Y GNF L ++ EM G+ P+++
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVV 344
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY +L++TM +A + + +M GL PN TY SL+ + + + ++ ++ EM
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
G ++ YN LL G +EA + M+ + PD ++S++I +
Sbjct: 405 IRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME-GKGLSPDVVSYSTIIAGFCRYQE 463
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ A M EM+E G P+ +SLIQ + +R ++ + + PD+
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDE 518
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ LI+ + AGN + L +EEM+ PN++TYN ++ + KR + + + M
Sbjct: 205 SYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM 264
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
GL PN TY ++ R E+T V EM KG YNTL+ VG
Sbjct: 265 GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNF 324
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A + +M + PD T++S+I G ++ A F++M G PN TS
Sbjct: 325 HQALVLHSEMLRN-GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
LI + + D+ R + + G P LLN
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLN 421
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTIYKEMTDNGLSPNWNTYASLLR 186
LN+ + K G P +++YN +LD++ R ++P + +Y+EM +G+S N +Y L+R
Sbjct: 152 LNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIR 211
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
+ A E L + EM+ +V YNT++ + DEAF++ M E +
Sbjct: 212 GFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM-GLEGLE 270
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P+ T++ +I G++ E + EM GF P+ +L+ Y K +
Sbjct: 271 PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVL 330
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQT 332
+ + G+ PD L+N M +
Sbjct: 331 HSEMLRNGLPPDVVTYTSLINTMCKA 356
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 16/226 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I + D + EM GV P+ ITY++L+ + +R + ++
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLF 506
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + L P+ TY SL+ Y + + L+++ EM +KG YN L+
Sbjct: 507 QEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQ 566
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS---------------CRGKVSEAEAM 271
T EA + + E+ P+ T+ ++I CS +G ++EA+ +
Sbjct: 567 ARTREAKRLLLKLFYDESI-PNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQV 625
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
F M++ +PN V +I + + + + + G P
Sbjct: 626 FESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIP 671
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 36/200 (18%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L+ + +G + + + M+ G+ P++++Y+ ++ R + + + EM
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G+SP+ TY+SL++ R + +++EM K +
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSL--------------------- 514
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
PD +T++S+I G ++EA + +EM++ GF P+ L
Sbjct: 515 ---------------LPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVL 559
Query: 291 IQCYGKAQRTDDVVRALNRL 310
I K RT + R L +L
Sbjct: 560 INGLNKQARTREAKRLLLKL 579
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
I+ + LIK + G + V+E M KPN YN ++ R + +
Sbjct: 601 IEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKL 660
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
YKEM D G P+ T +L++A E V R++ L L+ +
Sbjct: 661 YKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHK 720
Query: 226 VGYTDEAFEIFEDM 239
G D F + +M
Sbjct: 721 EGNIDAVFNLLTEM 734
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 4/212 (1%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P AF+ ++ G FD +V + MKA V+ + T++ L+ RA + +
Sbjct: 147 PEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFN 206
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M D P+ ++ L+ R R + + +K+K + V +Y L+ G
Sbjct: 207 RMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAG 265
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +MK + +P+ +T+S +I ++C C G+++ A +F EML+AG +PN
Sbjct: 266 NISEAERVFGEMKVA-GIKPNVYTYSIVIDSLCRC-GQITRAHDVFAEMLDAGCQPNSIT 323
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL++ + KA RT+ V++ N++ LG PD
Sbjct: 324 YNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPD 355
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+AR+ + ++ FS L++ Y AG ++ + M+ KP+ I ++ L+ + R +
Sbjct: 174 KARDVEITVE--TFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKR 231
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + + + + D P+ Y +L+R + RA + V+ EMK G++ +V Y+
Sbjct: 232 RASEAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYS 290
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
++ G A ++F +M + CQP+S T++S++ I G+ + ++N+M
Sbjct: 291 IVIDSLCRCGQITRAHDVFAEMLDA-GCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKR 349
Query: 278 AGFEPNLFVLTSLIQCYGKAQ 298
G EP+ LI+ + K +
Sbjct: 350 LGCEPDTVTYNFLIETHCKDE 370
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 111/217 (51%), Gaps = 3/217 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R++P+ ++TLI ++GN +G + EM+ + N+ TY++++ ++ + +P +
Sbjct: 76 RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ +EM G +P+ + +++ + R+ E VY+ M E G + Y+ L+
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195
Query: 223 CADVGYTDEAFEIFEDMK-SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A +G DE+ +I +M + P+ TFS++I G++ +A +F MLEAG +
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN + T+LI +A++ ++ + I PD
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPD 292
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 2/231 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM--KAIGVKPNMITYNNLLDTMGRAKRPWQ 161
++ D ++ LI G D L + EM +A G PN+IT++ L+ + R +
Sbjct: 182 YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEK 241
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ M + G PN TY +L+ RA ++ +M + + YN+L+A
Sbjct: 242 ALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 301
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G DEA +++ +M QP TF+++I GK+ A + EM G
Sbjct: 302 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLA 361
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ LI +A + D+ + ++ E D C + + +T
Sbjct: 362 ADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKT 412
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 111/229 (48%), Gaps = 9/229 (3%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
K I +A+ +++ AG L V+E MK+ P+++TYN L+++ A +
Sbjct: 5 KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKA 64
Query: 163 KTIYKEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+++ M + + P+ TY +L+ + E + EM++K + +V Y++++
Sbjct: 65 LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIK 124
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+E++++ E+M ++ C PD + F+ ++ + + +A ++ M+E+G++
Sbjct: 125 SLVKEAKPEESYKVLEEMMAA-GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYK 183
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
P+ LI K + D+ ++ L+ + R G + NV+T
Sbjct: 184 PDNVSYHILIHGLAKIGKLDESLKILSEMAM-------RAAGYVPNVIT 225
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKA-IGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D A+++LI Y G+ D +Y EM G++P ++T+N L+D + + + +
Sbjct: 292 DAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 351
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM GL+ + TY L+ RA ++ L VY++M+EK L + +
Sbjct: 352 VAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 411
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
G D+A+ +FE + S P+ TF + G+V +A+ +
Sbjct: 412 TGNIDQAYAVFEATRKS-GAVPNPETFRILSESLIKLGRVEDAQKLM 457
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN FSTLI G + L V+ M G KPN TY L+ + RA++ Q + +
Sbjct: 221 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQAREL 280
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-KGMQLSVTLYNTLL---- 220
+++MT + P+ Y SL+ Y + ++ +YREM G+Q ++ +NTL+
Sbjct: 281 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 340
Query: 221 ---------AMCADVGYT----------------------DEAFEIFEDMKSSENCQPDS 249
+ A++G DEA E+++ M+ +
Sbjct: 341 KLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 400
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
S + +C G + +A A+F ++G PN L + K R +D
Sbjct: 401 SCVSFVGGLCK-TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 452
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EK +DP+ F+TLI YG AG + C V +M+ G+K N+I++ +++ + +
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKI 491
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I +M + PN Y S++ AY + E + +MK G+ S+ YN L
Sbjct: 492 PEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL 551
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L DEA E+ ++ +++ +PD +++++I+ C +G A + EM +
Sbjct: 552 LKGLCKNSQIDEAEELIYNL-TNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDV 303
P L L+ G A R D+
Sbjct: 611 IRPTLRTYHPLLSALGSAGRVHDM 634
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 108/208 (51%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y + G +++E+MK+ ++P+ ITYN L++ + + + + + + EM
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+G+ P+ T+ +L+ AYGRA E +V +M++KG++ +V + +++ G
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA I +DM ++ P++ ++S+I G +A + +M +G ++F L
Sbjct: 493 EAVAILDDM-IHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLL 551
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
++ K + D+ + L G+ PD
Sbjct: 552 LKGLCKNSQIDEAEELIYNLTNQGLRPD 579
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 45/275 (16%)
Query: 78 IWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMK 135
+W + K A K+ ++ D + PN ++T+I + G+ + + ++M
Sbjct: 205 LWRSGKGSDALKVFDEMVD-------RGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
G KPN++TYN LL + RA R + + + EMT + P+ TY+ L R
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317
Query: 196 DTLSVYREMKEKGMQL-----------------------------------SVTLYNTLL 220
LS++ E +KG+ + + +YNTL+
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
V AF IFE MK S + +PD T++++I ++EAE + EM ++G
Sbjct: 378 NGYCQVRDLQGAFSIFEQMK-SRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGV 436
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+P++ +LI YG+A + + L+ + + GI
Sbjct: 437 DPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 3/230 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKP-NMITYNNLLDTMGRAKRPWQV 162
R D A++ ++ AG+ D L + M ++ G P + +YN ++ + R+ +
Sbjct: 155 RPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDA 214
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ EM D G++PN TY +++ + + E + +M + G + +V YN LL+
Sbjct: 215 LKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSG 274
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G DE + ++M +S + PD +T+S + + G ++F E L+ G
Sbjct: 275 LCRAGRMDETRALMDEM-TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII 333
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+ + L+ K + + L L G+ P L+N Q
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQV 383
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N+ R D +++T+I G+ D L + +EM ++P + TY+ LL +G A R
Sbjct: 573 NQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVH 632
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
++ +Y+ M + P+ + Y + R S+ +EM EKG+ T
Sbjct: 633 DMECLYQHMVHKNVEPSSSIYGT------RCENESKVASLKKEMSEKGIAFDDT 680
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G +PN TYN+++D + I K+ G P+ TY SL+ + + +
Sbjct: 395 GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQA 454
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++V+++ KG++ S+ +YNTL+ G A ++ +M + + C+PD WT++ +I
Sbjct: 455 MAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEM-AEKGCKPDIWTYNLIIN 513
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G +S+A + + + G P++F +L+ Y + + D + +NR+ G+TP
Sbjct: 514 GLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTP 573
Query: 318 DDRFCGCLLNVMTQTPKEE 336
D LLN + +T K E
Sbjct: 574 DVITYNTLLNGLCKTAKSE 592
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 2/242 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ Y D + + M + G+ P++ITYN LL+ + + + +V I+
Sbjct: 539 DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIF 598
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K MT+ G +PN TY +++ + ++ + + + EMK KG+ V + TL+ V
Sbjct: 599 KAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKV 658
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A+ +F M+ + + T++ +I+ S + + A +F+EM + G +P+ +
Sbjct: 659 GDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYT 718
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK--EELGKLVECV 344
LI + K + + L E G P G +LN + K E +G + V
Sbjct: 719 YRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMV 778
Query: 345 EK 346
+K
Sbjct: 779 QK 780
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 115 IKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGL 174
++ YG G ++ +E M P++ +YN +++ + Q +Y M D +
Sbjct: 162 MRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKV 221
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
+ TY ++++ R L + R M G + Y T++ + G D A E
Sbjct: 222 ESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 281
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+F++M C PD TF+ ++ +G V E+E +F+++L+ G PNLF IQ
Sbjct: 282 LFDEMLECCLC-PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340
Query: 295 GKAQRTDDVVRALNRLPELGITPD 318
K D VR L + G+ PD
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPD 364
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 101/213 (47%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ + + +++ M G PN+ITYN +++++ +K+ + +
Sbjct: 574 DVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLL 633
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLLAMCAD 225
EM GL+P+ ++ +L+ + + + ++R M K+ + + YN +++ ++
Sbjct: 634 GEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSE 693
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
A +F +MK + C PD++T+ +I G V++ E +E GF P+L
Sbjct: 694 QLNMKMALRLFSEMKKN-GCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLT 752
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ C + + V ++ + + I PD
Sbjct: 753 TFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 108/270 (40%), Gaps = 37/270 (13%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R K++E + DT R + + DP+ +S ++ + G F+ VY MK V+ ++
Sbjct: 167 RKGKIQE-AVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDV 225
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
TY + + R RP+ + + M G N Y +++ + + ++ E
Sbjct: 226 YTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDE 285
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM------------------------ 239
M E + VT +N L+ G+ E+ +F+ +
Sbjct: 286 MLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGS 345
Query: 240 ----------KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
S E +PD T++++I + +V EAE ++M+ GFEPN F S
Sbjct: 346 LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 405
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+I Y K D R L G PD+
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDE 435
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 10/236 (4%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G P++ TYN L+D R + + M G++P+ TY +LL + E+
Sbjct: 535 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ +++ M EKG ++ YNT++ + +EA ++ +MK S+ PD +F ++IT
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK-SKGLTPDVVSFGTLIT 653
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS--LIQCYGKAQRTDDVVRALNRLPELGI 315
G + A +F M E ++ + T +I + + +R + + + G
Sbjct: 654 GFCKVGDLDGAYGLFRGM-EKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGC 712
Query: 316 TPDDRFCGCLLNVMTQTPKEELGK--LVECVEK----SNSKLGYVVKLLLEEQDIE 365
PD+ L++ +T G L+E +EK S + G V+ L E ++
Sbjct: 713 DPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQ 768
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 85/219 (38%), Gaps = 41/219 (18%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT---DNGLSPNWNTYASLLRAYGRARYG 194
G K + TY ++L +G + +++ + EM DN L Y +R YGR
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEG--VYVEAMRFYGRKGKI 171
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT--- 251
++ + + M SV YN ++ + + GY ++A +++ MK + + D +T
Sbjct: 172 QEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKK-VESDVYTYTI 230
Query: 252 --------------------------FSSMITICSCR------GKVSEAEAMFNEMLEAG 279
FS+ + C+ G A +F+EMLE
Sbjct: 231 RIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC 290
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ L+ K + R +++ + G+ P+
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPN 329
>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
Length = 714
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+ R D +++L+ +Y G + ++ E++ V ++ITY+ L+ T + ++
Sbjct: 262 AKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFEIEDQHVITDVITYSTLISTFAKTRK 321
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+Y++M + + PN TY SL+ A RA + + +M+ +G+ +V Y+T
Sbjct: 322 YSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGISPNVVTYST 381
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++A C AF++F +M E PD TFS+++++C + +A + M +A
Sbjct: 382 MIASCRSKDNWVTAFDLFLEMIRKE-IPPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDA 440
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + N+ + ++++ G+A R DD R L+ GI P+
Sbjct: 441 GIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPN 480
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 3/229 (1%)
Query: 92 EKSYDTRARNEKWRI--DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
++SYD E + D +STLI + + + +YE+M V PN+ITYN+L
Sbjct: 288 KESYDILFEIEDQHVITDVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSL 347
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ RA Q + +M G+SPN TY++++ + ++ EM K +
Sbjct: 348 IFACLRANNFSQAFAFFDDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEI 407
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
++ LL++C ++A ++ E M+ + Q + +S+++ +C G++ +A
Sbjct: 408 PPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDA-GIQLNIRMYSAVVHVCGQAGRLDDAF 466
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +E G +PN+ + T+LI A+ D R L + E +TP+
Sbjct: 467 RILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELMKEDHVTPN 515
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 111/245 (45%), Gaps = 20/245 (8%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT---------MGRAK 157
D FSTLI L G +D + EEM A V PN+ T+N L+ M R +
Sbjct: 189 DVFTFSTLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCKNSLATSLMSRKR 248
Query: 158 RPWQ--VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ + ++ E GL P+ TY SLL Y +++ + E++++ + V
Sbjct: 249 QNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFEIEDQHVITDVIT 308
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
Y+TL++ A A E++E M + P+ T++S+I C S+A A F++M
Sbjct: 309 YSTLISTFAKTRKYSLAIEMYEKMMERQ-VMPNVITYNSLIFACLRANNFSQAFAFFDDM 367
Query: 276 LEAGFEPNLFVLTSLI-QCYGKAQRTDDVVRALNRLPEL---GITPDDRFCGCLLNVMTQ 331
G PN+ +++I C K D+ V A + E+ I PD LL+V
Sbjct: 368 QAQGISPNVVTYSTMIASCRSK----DNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQH 423
Query: 332 TPKEE 336
+ + E
Sbjct: 424 SKQWE 428
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 112/223 (50%), Gaps = 18/223 (8%)
Query: 98 RARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
R +E+ +I ++ F+ I+ G++ + + M+ GV+P++++YN +L +
Sbjct: 74 REESERRKIKLSSLPFNACIRALERMGDWREAVAILNIMEKDGVEPDIVSYNTVLSALRH 133
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ V + K M + +SP+ ++ + L A R E +++ M E ++ V
Sbjct: 134 SPDIQNVFVMLKRMREK-VSPDIVSFNTALAACQRQCDWESGVAILEMMSEDQIERDVFT 192
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC-----------RGK 264
++TL+++C G DEAF + E+M ++N P+ +TF+++I +C +
Sbjct: 193 FSTLISLCDRCGKYDEAFALKEEM-DAKNVSPNIYTFNALIAVCKNSLATSLMSRKRQNT 251
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVV 304
++ A+ +F E AG P++ SL+ Y GK + + D++
Sbjct: 252 LTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDIL 294
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
DP FS L+ + + ++ ++V E M+ G++ N+ Y+ ++ G+A R I
Sbjct: 410 DPMTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRIL 469
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
E +G+ PN + +L+ A AR + V MKE + ++ +N LL C V
Sbjct: 470 DECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVV 529
Query: 227 GYTDEAFEI---FEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G + AF++ ++ N Q TF+++I C + +A ++++M P+
Sbjct: 530 GNSTCAFQVVGLLQEYGFRANLQ----TFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPS 585
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
L +L A+ D RA++ + ++ I + L+ + TP + L+
Sbjct: 586 LSTFNALSMA---AEEGGDWRRAIDVMVDMRIKTE----KILIRMAGHTPSVQAYNSLIS 638
Query: 343 -CVEKSNSKLGYVV 355
CV+ SN + + V
Sbjct: 639 ACVKSSNYQKAFDV 652
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL---LDTMGRAKRPW 160
+R + F+TLIK + + VY +M+ ++P++ T+N L + G +R
Sbjct: 547 FRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAI 606
Query: 161 QVKTIYKEMTDN------GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
V + T+ G +P+ Y SL+ A ++ + VY+ MK G++ ++
Sbjct: 607 DVMVDMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIV 666
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
YN ++++ + E ++ +MK E PDS T + MI
Sbjct: 667 TYNLIISILSGQRKLSEVLKVINEMK-QEEVTPDSETIALMI 707
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 96 DTRARNEKWRI-------DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
D R + EK I A+++LI + N+ +VY+ MK GV+ N++TYN
Sbjct: 611 DMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNL 670
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
++ + ++ +V + EM ++P+ T A ++ A
Sbjct: 671 IISILSGQRKLSEVLKVINEMKQEEVTPDSETIALMIDA 709
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 8/219 (3%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT---MGRAKRPW 160
+R D F +I T F + E MK + M+T + L GR RP
Sbjct: 46 FRHDHETFGLIISRLVTVNQFRPAEGMLERMKQ---EKCMVTEDIFLSICRGYGRVHRPL 102
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ +M L P Y ++L + + + YREM+E G+ SV N L+
Sbjct: 103 DAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILI 162
Query: 221 -AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
A+C + D A IF++M + CQPDS+T+ ++I G +SEA+ +F EM + G
Sbjct: 163 KALCKNKETVDSALRIFQEM-PNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKG 221
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F ++ TSLI ++ D+ + L + I P+
Sbjct: 222 FSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPN 260
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 112/229 (48%), Gaps = 4/229 (1%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E +++ P A+ T++ + + + Y EM+ +G+ ++++ N L+ + + K
Sbjct: 112 EGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKET 171
Query: 160 WQ-VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
I++EM + G P+ TY +L+ R + +++EM++KG SV Y +
Sbjct: 172 VDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTS 231
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ DEA + E+MK ++ +P+ +T+SS++ G S+A + M +
Sbjct: 232 LIHGLCQSNNLDEAIGLLEEMKRND-IEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKK 290
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
PN+ ++LI K ++ + V L+R+ G+ P+ G +++
Sbjct: 291 HHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIIS 339
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D L +++EM G +P+ TY L++ + R + K ++KEM G S + TY SL
Sbjct: 173 DSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSL 232
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ ++ ++ + + EMK ++ +V Y++L+ G++ +A ++ E M +
Sbjct: 233 IHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHH 292
Query: 245 CQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
P+ T+S++I +C R K+ EA + + M G +PN + +I A +
Sbjct: 293 L-PNMVTYSTLINGLCKER-KLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEA 350
Query: 304 VRALNRLPELGITPD 318
++ + GI+P+
Sbjct: 351 ANFIDEMVLGGISPN 365
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI GN +++EM+ G +++TY +L+ + ++ + +
Sbjct: 190 DSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLL 249
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM N + PN TY+SL+ + + + + M +K ++ Y+TL+
Sbjct: 250 EEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKE 309
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
EA EI + M+ + +P++ + +I+ G EA +EM+ G PN
Sbjct: 310 RKLREAVEILDRMR-IQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPN 365
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 92/215 (42%), Gaps = 6/215 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++LI + N D + + EEMK ++PN+ TY++L+D + + Q + + M
Sbjct: 229 YTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMD 288
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCADVGYT 229
PN TY++L+ + R + + + M+ +G++ + LY +++ +CA Y
Sbjct: 289 KKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQ 348
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE-----AMFNEMLEAGFEPNL 284
+ A I E + + SW+ + +G + + ++ M +
Sbjct: 349 EAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEI 408
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
L++C+ K R L + G PD+
Sbjct: 409 DTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDE 443
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + E+ R + ++ +I +YG + + ++ EM++IG K N+ TY L++ R
Sbjct: 282 RMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREG 341
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + ++++M G P+ Y +L+ AY RA + + ++ M+ G + YN
Sbjct: 342 LCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYN 401
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ G EA FE +K + P + +++ + G V E + ++ +
Sbjct: 402 ILVDAYGRAGLHREAEATFESLK-QQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHK 460
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+G P+ F L +++ Y +A R DD+ R L
Sbjct: 461 SGLRPDTFALNAMLHAYARAGRLDDMERLL 490
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P++I YN L+D GR ++ + ++IY + + P +TYA LLRAY AR
Sbjct: 184 RPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEG 243
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
V EM+E G+ S T+YN L T +A E+++ MK E C+ ++ T++ MI +
Sbjct: 244 VISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMK-KERCRTNTETYTLMINVY 302
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ A +FNEM G + N+ T+L+ + + + ++ + G PD
Sbjct: 303 GKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPD 361
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 2/223 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ VY+ MK + N TY +++ G++K+P I+ EM G N TY +L+ A
Sbjct: 277 VEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNA 336
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ R E V+ +M++ G + V YN L+ + G+ A EIF M+ C+P
Sbjct: 337 FAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHM-GCEP 395
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D +++ ++ G EAEA F + + G P + L+ + ++ + +
Sbjct: 396 DRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVM 455
Query: 308 NRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNS 349
+L + G+ PD +L+ + + +++ +L+ ++ + S
Sbjct: 456 AQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAMDLAGS 498
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ ++ L++ Y A + V EM+ G+ P+ YN LD + +A+ + +Y+
Sbjct: 223 DTYALLLRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQR 282
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M N TY ++ YG+++ + ++ EM+ G + ++ Y L+ A G
Sbjct: 283 MKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGL 342
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
++A E+FE M+ + + +PD + +++++ S G A +F+ M G EP+
Sbjct: 343 CEKAEEVFEQMQQAGH-EPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYN 401
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITP 317
L+ YG+A + L + G+ P
Sbjct: 402 ILVDAYGRAGLHREAEATFESLKQQGMAP 430
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R D ++ LI YG + ++Y + P TY LL A+ + +
Sbjct: 183 FRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAE 242
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM ++G+ P+ Y + L +AR + VY+ MK++ + + Y ++ +
Sbjct: 243 GVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVY 302
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A +IF +M+S C+ + T+++++ + G +AE +F +M +AG EP+
Sbjct: 303 GKSKQPMSAMKIFNEMQSI-GCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPD 361
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ +L++ Y +A + + +G PD
Sbjct: 362 VYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPD 396
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 7/167 (4%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
L+ + +GN C V ++ G++P+ N +L RA R ++ + M G
Sbjct: 438 LLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAMDLAG 497
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVY-----REMKEKGMQLSVTLYNTLLAMCADVGY 228
S + ++ + AY RA Y + + R+ K+ G+ V + + + A
Sbjct: 498 -SADVGSHNVAVNAYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKE 556
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+ EIFE+M + C PD+ T ++ CS +V + A+ M
Sbjct: 557 YGKCLEIFEEMVDA-GCYPDAGTAKVLMAACSDERQVEQVAAIVRSM 602
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
+++ + G + C +++M GV ++ +Y+ +D M ++ +PW+ +YKEM
Sbjct: 155 ILRGWSKLGWWGKCKEYWDKMDTEGVPKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 214
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
+ + Y +++RA G ++ E + V+REM+E+G + +V +NT++ + + G +A+
Sbjct: 215 IKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 274
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
+ ++M + CQPDS ++ + + K SE ++F M+ +G P + L++
Sbjct: 275 RMLDEM-PKKGCQPDSISYMCLFSRLE---KPSEILSLFGRMIRSGVRPKMDTYVMLMRK 330
Query: 294 YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ + V+ + E G TPD +++ + Q
Sbjct: 331 FERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQ 368
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 32/172 (18%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN------------ 147
++ + ++D A++T+I+ G + + + V+ EM+ G +PN+ T+N
Sbjct: 211 KSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 270
Query: 148 ----NLLDTM----------------GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+LD M R ++P ++ +++ M +G+ P +TY L+R
Sbjct: 271 RDAYRMLDEMPKKGCQPDSISYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRK 330
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
+ R + + L V++ MKE G YN ++ G D A E E+M
Sbjct: 331 FERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 382
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 7/236 (2%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+TL+K Y G+ D L ++++M G+ PN +TY +++ + + IY +M +
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
+SP SL+R Y +AR E+ ++ E G+ +V YN+LL+ G E
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSE 451
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A I+E M + +P ++++MI +G + A +F EMLE G +PNL + L+
Sbjct: 452 ACSIWEKM-VRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLM 510
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM-----TQTPKEELGKLVE 342
Y K T+ +R+ I P D C ++N + T ++ L KLV+
Sbjct: 511 DGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQ 566
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + PN F+ LI + + N D L V +EMK G++ ++ Y L+D R
Sbjct: 601 KIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMV 660
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ E+ + GLSPN Y+S++ + + + E L +++ M +G+ + +Y TL+
Sbjct: 661 NASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLI 720
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G A E++ +M ++ PD T+S +I +G++ A+ + +M
Sbjct: 721 SGLLKEGKLLFASELYAEM-LAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCM 779
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
P +F+ +LI + K + R N + + G+ PDD L+N
Sbjct: 780 TPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVN 826
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+Y+ + + I P F+ +LI+ Y A + + +++E A G+ N+ TYN+L
Sbjct: 381 DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSL 439
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L + + + + +I+++M G+ P+ +Y +++ + + + V+ EM EKG+
Sbjct: 440 LSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL 499
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ ++ Y+ L+ G T+ AF +++ M+ EN P +T + +I G+ SE++
Sbjct: 500 KPNLITYSVLMDGYFKKGDTEYAFGLYDRMR-GENIAPSDFTCNIIINGLCKAGRTSESQ 558
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++++ GF P +I + K + + + ++G++P+
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPN 607
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 1/221 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
+R + D F+ L+ Y + ++ + + + P + N L + +
Sbjct: 145 SRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNM 204
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + +Y +M G+ + T + ++RA R E+ +RE K KG++L Y+
Sbjct: 205 IREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSI 264
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ + A + +M+ + P F+ +I +C +GK+ EA + EML
Sbjct: 265 VIEAVCKKPDSVAALGLLREMR-DKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSC 323
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
G N+ V T+L++ Y K D + +++ E GI P++
Sbjct: 324 GKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNN 364
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 3/215 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +S L+ Y G+ + +Y+ M+ + P+ T N +++ + +A R + +
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQ 558
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
K++ G P TY ++ + + L+VY EM + G+ +V Y L+
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGF 618
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D A ++ ++MK ++ + D + ++I +G + A + +E+ E G PN
Sbjct: 619 CKSNNMDLALKVMDEMK-NKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPN 677
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V +S+I + K Q + + R+ GI D
Sbjct: 678 KVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCD 712
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 6/226 (2%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
YD R R E I P+ F+ I + G AG + +++ G P +TYN ++D
Sbjct: 526 YD-RMRGEN--IAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDG 582
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ +Y EM G+SPN TY +L+ + ++ + L V EMK KG++L
Sbjct: 583 FVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELD 642
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
VT+Y L+ G A ++ +++ P+ +SSMI+ + A +
Sbjct: 643 VTVYCALIDGFCRKGDMVNASQLLSELQEV-GLSPNKVVYSSMISGFRKLQNMEAALHLH 701
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M+ G +L + T+LI K + + GI PD
Sbjct: 702 KRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 13/240 (5%)
Query: 84 SPRASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN 142
S R KL+E + + A+N+ +D A+S +I+ + L + EM+ G P+
Sbjct: 234 SMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPH 293
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+ + ++ + + + + EM G N +L++ Y + + L ++
Sbjct: 294 EVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFD 353
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+M E G+ + Y ++ C G D+A+EI+ MK +++ P + +S+I R
Sbjct: 354 KMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMK-NKDISPTVFNVNSLI-----R 407
Query: 263 GKV-----SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G + EA +F+E + G N+F SL+ K + + ++ G+ P
Sbjct: 408 GYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRP 466
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R NE D ++TLI G +Y EM A G+ P++ITY+ L+ +
Sbjct: 703 RMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKG 762
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + I ++M ++P Y +L+ + + ++ ++ EM +KG+ T Y+
Sbjct: 763 QLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYD 822
Query: 218 TLL 220
L+
Sbjct: 823 ILV 825
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 114/228 (50%), Gaps = 7/228 (3%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
K I PN +++TL+++YG A F ++++ M++ V+ N++TYN +++ G+
Sbjct: 337 RKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEH 396
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +EM G+ PN TY++++ + +A + ++++++ G+++ LY T+
Sbjct: 397 EKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTM 456
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G A + ++K +N D + I I + G++ EA +F + +A
Sbjct: 457 IVAYERAGLVAHAKRLLHELKRPDNIPRD-----TAIGILARAGRIEEATWVFRQAFDAR 511
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ V +I + K ++ +VV ++ +G PD +LN
Sbjct: 512 EVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDVIALVLN 559
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 1/219 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++STL+ +Y F L+++ EM ++ T N ++D G+ P + ++
Sbjct: 274 DTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLF 333
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K +Q +V YNT++ +
Sbjct: 334 WSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKT 393
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++MK +P++ T+S++I+I GK+ A +F ++ +G + +
Sbjct: 394 LEHEKATNLIQEMK-KRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVL 452
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
++I Y +A R L+ L P D G L
Sbjct: 453 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGIL 491
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S LI L ++ ++++ +KA + P++I YN++++ G+AK + + + +EM
Sbjct: 208 YSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEMR 267
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK----------------------- 207
DN + P+ +Y++LL Y + + LS++ EM E
Sbjct: 268 DNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPK 327
Query: 208 ------------GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
G+Q +V YNTLL + + EA +F M+ S++ Q + T+++M
Sbjct: 328 EADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQ-SKDVQQNVVTYNTM 386
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I I + +A + EM + G EPN +++I + KA + D +L G+
Sbjct: 387 INIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGV 446
Query: 316 TPDD 319
D+
Sbjct: 447 RIDE 450
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 111/230 (48%), Gaps = 1/230 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L ++M+ V +++ Y+NL+D + + +I+
Sbjct: 169 DRYTYSTLITSFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIF 228
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + +SP+ Y S++ +G+A+ + + +EM++ +Q Y+TLLA+ D
Sbjct: 229 SRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDN 288
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M ++ C D T + MI + EA+ +F M + G +PN+
Sbjct: 289 QKFVEALSLFFEMNEAK-CPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVS 347
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+L++ YG+A + + + + + ++N+ +T + E
Sbjct: 348 YNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHE 397
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 7/259 (2%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P++ YN LL + RAK+ ++ EM GLSP+ TY++L+ ++G+ + +L
Sbjct: 133 PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLFW 192
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
++M++ + + LY+ L+ + + +A IF +K+S PD ++SMI +
Sbjct: 193 LQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKAS-TISPDLIAYNSMINVFG 251
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
EA + EM + +P+ ++L+ Y Q+ + + + E D
Sbjct: 252 KAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLT 311
Query: 321 FCGCLLNVMTQ--TPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNS 378
C +++V Q PKE +L + K + V L E D EA LF
Sbjct: 312 TCNIMIDVYGQLHMPKEA-DRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRL 370
Query: 379 I-SKDVKKAYC--NCLIDL 394
+ SKDV++ N +I++
Sbjct: 371 MQSKDVQQNVVTYNTMINI 389
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
SP+ Y LLR RA+ ++ EM++KG+ Y+TL+ G D +
Sbjct: 132 SPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLF 191
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+ M+ +N D +S++I + S+A ++F+ + + P+L S+I +
Sbjct: 192 WLQQME-QDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVF 250
Query: 295 GKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
GKA+ + L + + + PD LL + K
Sbjct: 251 GKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQK 290
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R P+ A S+L++ G + LN+ + + GV PN+ YN L+D++ + ++ +
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ ++ M GL PN TY+ L+ + R + LS EM + G++LSV YN+L+
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G A +M ++ +P T++S++ +GK+++A +++EM G P
Sbjct: 447 HCKFGDISAAEGFMAEM-INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ T+L+ +A D V+ N + E + P+
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N+K +++L+ Y + G + L +Y EM G+ P++ T+ LL + RA
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ EM + + PN TY ++ Y +EM EKG+ Y L+
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G EA ++F D NC+ + ++ ++ GK+ EA ++ EM++ G
Sbjct: 585 HGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELG 338
+ +L LI K + L + + G+ PDD +++ ++T KE G
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 7/233 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+W + PN ++ +I+ Y G+ +EM G+ P+ +Y L+ + +
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ K + N Y LL + R E+ LSV +EM ++G+ L + Y L+
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 221 AMCADVGYTDEA--FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ + D F + ++M +PD ++SMI S G EA +++ M+
Sbjct: 655 D--GSLKHKDRKLFFGLLKEMHD-RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
G PN T++I KA ++ +++ + P+ GC L+++T+
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
+F + ++ +M ++G++P++ Y ++ ++ K + K + M G N Y
Sbjct: 207 HFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYN 266
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
L+ + + + + + +++ K ++ V Y TL+ V + FEI +M
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV----QEFEIGLEMMDE 322
Query: 243 ENC---QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
C P SS++ RGK+ EA + +++ G PNLFV +LI K ++
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LGKLVE 342
+ +R+ ++G+ P+D L+++ + K + LG++V+
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TL+ F+ L + +EM + P+ ++L++ + + + + +
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 355
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K + D G+SPN Y +L+ + + R + ++ M + G++ + Y+ L+ M
Sbjct: 356 KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 415
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A +M + + + ++S+I G +S AE EM+ EP +
Sbjct: 416 GKLDTALSFLGEMVDT-GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
TSL+ Y + + +R + + GI P
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 1/214 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++I G+F +++ M G PN +TY +++ + +A + + +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M PN TY L + KG+ + YN L+
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +EA E+ M + PD T+++MI R V +A ++N M E G P+
Sbjct: 801 GRIEEASELITRM-IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+LI A N + G+ P+++
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 116/228 (50%), Gaps = 5/228 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F++L+ T + + CL M+A +KP++ITY L++ +A+R + +++EM
Sbjct: 251 FNSLMAFQKTVADAEACLR---HMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREMV 307
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+GL P+ Y +LL AY + + E S+++ M + + + Y TLLA A+ G
Sbjct: 308 ASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMK 367
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A + + MK + +P+ T+ +++ + ++ F ++ +AG +PN + T L
Sbjct: 368 KAERLLKRMKQA-GLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLL 426
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV-MTQTPKEEL 337
++ +G+ + + + ++ + G D R L++ T K+E+
Sbjct: 427 VRTFGQQEDFESALSWFKKMLDSGCPADQRSRAALMDACQTSEQKQEV 474
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 40/265 (15%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
W + F+ +I YG G + EM+ +G++PN+ + +LL+ R + +
Sbjct: 103 WNFGIHDFNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAE 162
Query: 164 TIYKEMTDNGLSPNWNTYAS------------------------------------LLRA 187
+IY+EM G +P TY +L
Sbjct: 163 SIYQEMLKTGPAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHT 222
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
YG+A + +++R+MK G+ ++V +N+L+A V +A M++++ +P
Sbjct: 223 YGKAGKFSEQQALFRQMKGAGVPMTVVTFNSLMAFQKTVA---DAEACLRHMQAAK-IKP 278
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T++ +I S +V EA +F EM+ +G P+ +L+ Y K + +
Sbjct: 279 DVITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLF 338
Query: 308 NRLPELGITPDDRFCGCLLNVMTQT 332
+ + PD R LL T
Sbjct: 339 KSMGQDRCRPDIRSYTTLLAAYANT 363
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+I P+ ++ LI Y A + V+ EM A G++P+ I YN LLD + K
Sbjct: 275 KIKPDVITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGA 334
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++++K M + P+ +Y +LL AY + + + MK+ G++ +V Y TL+
Sbjct: 335 ESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQG 394
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
V + + FED++ + +P+S F+ ++ + A + F +ML++G
Sbjct: 395 YTSVHDINAMLQTFEDLQKA-GIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPA 453
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+ +L+ +++ +V+ LP
Sbjct: 454 DQRSRAALMDACQTSEQKQEVLEYFGSLP 482
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 59/136 (43%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
++ R D +++TL+ Y GN + + MK G++PN++TY L+
Sbjct: 343 QDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDIN 402
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++++ G+ PN + L+R +G+ E LS +++M + G L+
Sbjct: 403 AMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRAALM 462
Query: 221 AMCADVGYTDEAFEIF 236
C E E F
Sbjct: 463 DACQTSEQKQEVLEYF 478
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 2/229 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F +++ Y A + +E+M G+K ++ YN L+D + ++K+ + I+KE
Sbjct: 214 DTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKE 273
Query: 169 MTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M NG P+ TY L+ +G + SVY+EM + G+Q V Y L++ G
Sbjct: 274 MKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSG 333
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA ++F +M+++ C P + +I ++ EA F +GF +
Sbjct: 334 KCDEAIKVFREMETN-GCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTC 392
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+++ Y ++ + + ++ + + GI P+ R +L+ + ++ K E
Sbjct: 393 NAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIE 441
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN ++ D ++ L++ +G + +VY+EM G++P+++ Y L+ + ++ +
Sbjct: 276 RNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKC 335
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++EM NG P+ + Y L+ G ++ L + K G + V N +
Sbjct: 336 DEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAV 395
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ AF++ ++M+ S P+S T+ ++ K+ EA +F M + G
Sbjct: 396 VGAYCRSSKFQHAFKMVDEMRKS-GIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDG 454
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
EP L T ++ + +R D ++ N++ E G+ P L+N
Sbjct: 455 CEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALIN 502
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 1/213 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ + LI G+ D L +E KA G + T N ++ R+ + +
Sbjct: 354 PHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVD 413
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM +G+ PN TY +L +++ E+ +V++ M + G + + Y ++ M
Sbjct: 414 EMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNE 473
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A +++ MK + P FS++I ++ EA A F EML+ G P +
Sbjct: 474 RVDVALKVWNQMK-EKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLF 532
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
++L + + R +L EL TP R
Sbjct: 533 SNLKEALIEGGRISLAQEMALKLDELRKTPMRR 565
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 94 SYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
++D + I PN +S LI + G ++++ ++ +KP+ T+N L+D
Sbjct: 214 AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 273
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ ++ + KT++ M G+ P+ TY SL+ Y + S++ M + G+
Sbjct: 274 GFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNP 333
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ YN L+ + D+A +F +M +N P+ T++S+I S G++S A +
Sbjct: 334 DIRSYNILINGFCKIKKVDKAMNLFNEMH-CKNIIPNVVTYNSLIDGLSKSGRISYALQL 392
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++M + G PN+ S+I K + D + + + + GI P
Sbjct: 393 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP 438
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 21/194 (10%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI + D +N++ EM + PN++TYN+L+D + ++ R +
Sbjct: 334 DIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLV 393
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
+M D G+ PN TY S++ A + + +++ + K++G+Q S+ Y L+ +C
Sbjct: 394 DQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV 453
Query: 226 VGYT-------------------DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
GY DEA + MK S +C P++ T+ I +
Sbjct: 454 EGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDS-SCIPNAVTYEITIRSLLDNNEND 512
Query: 267 EAEAMFNEMLEAGF 280
+AE +F EM+ G
Sbjct: 513 KAEKLFREMITRGL 526
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 115/274 (41%), Gaps = 20/274 (7%)
Query: 81 NPKSPR-------ASKLKEKSYDT----RARNEKWRIDPNAFSTLIKLYG------TAGN 123
NP P S +K K Y T + E I PN F+ I +Y
Sbjct: 81 NPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQ 140
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
++++ A+G + ++Y L+ + + + + + + N Y +
Sbjct: 141 IHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNT 200
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
++ + ++ D +Y EM KG+ +V Y+ L++ VG +A ++F + E
Sbjct: 201 VIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKI-ILE 259
Query: 244 NCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
N +PD +TF+ ++ C R K+ E + +F M++ G P++ SL+ Y + +
Sbjct: 260 NIKPDGYTFNILVDGFCKDR-KMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNT 318
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
N + + G+ PD R L+N + K +
Sbjct: 319 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVD 352
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ +D ++ TLI G L++ + + V+ N + YN ++ M + K
Sbjct: 156 FHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAF 215
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
+Y EM G+SPN TY++L+ + +D + ++ ++ + ++ +N L+
Sbjct: 216 DLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGF 275
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C D E +F M + PD T++S++ +V+ A+++FN M + G P
Sbjct: 276 CKDRK-MKEGKTVFA-MMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNP 333
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ LI + K ++ D + N + I P+
Sbjct: 334 DIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPN 369
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + +++ ++T+I + + ++Y EM + G+ PN++TY+ L+
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ ++ + P+ T+ L+ + + R ++ +V+ M ++G+ V YN
Sbjct: 245 KLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYN 304
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEML 276
+L+ V + A IF M + PD +++ +I C + KV +A +FNEM
Sbjct: 305 SLMDGYCLVKEVNTAKSIFNTM-AQGGVNPDIRSYNILINGFCKIK-KVDKAMNLFNEMH 362
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ SLI K+ R ++ ++++ + G+ P+
Sbjct: 363 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 404
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
KW + P+ +F+TLI Y G+ D + M A G +P++ TY+ L++ + + +
Sbjct: 164 KWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLD 223
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ EM DNGL PN T+ +L+ + + + + +Y++M +G+ + YNTL+
Sbjct: 224 EANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLI 283
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G + ++ ++M + +PD +++++I G + A + N+M++
Sbjct: 284 YGLCKKGELKQVHDLIDEMIMN-GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESI 342
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ T+LI C + R D + L + +G+ PD+
Sbjct: 343 RLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDN 381
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 7/217 (3%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D FS L+ Y +G + + K ++ T +L+ + + V
Sbjct: 63 RSDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWD 122
Query: 165 IYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
YKE+ + G + + L++ + G R + SV+ + + G++ SV +NTL+
Sbjct: 123 FYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQ---SVFDAITKWGLRPSVVSFNTLIN 179
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+G DE F + M +S QPD +T+S +I GK+ EA +FNEML+ G
Sbjct: 180 GYIKLGDLDEGFRLKSAMHAS-GAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLV 238
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN T+LI + K ++ D + ++ G++PD
Sbjct: 239 PNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPD 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
+ Y+E+ G ++ +N L+ + ++++ +T GL P+ ++ +L+ Y
Sbjct: 122 DFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGY 181
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ ++ + M G Q V Y+ L+ G DEA E+F +M + P+
Sbjct: 182 IKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDN-GLVPN 240
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
TF+++I KV A ++ +ML G P+L +LI K V ++
Sbjct: 241 GVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLID 300
Query: 309 RLPELGITPD 318
+ G+ PD
Sbjct: 301 EMIMNGLKPD 310
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TLI G+ + L + +M ++ + + Y L+ + R R + +
Sbjct: 310 DKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKML 369
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+EM GL P+ TY ++ + + R + + REM+ G
Sbjct: 370 REMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 6/242 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+++I + +GN + ++ +MK G KP T+N L+ G A + + +
Sbjct: 82 DSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLL 141
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + D G+ PN TY L+RA+ E+ ++ +M GMQ YNTL A+
Sbjct: 142 EFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEK 201
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T A E+ +M + P+ T S ++ G + +A M E G PNLFV
Sbjct: 202 GETIRAEEMILEM-LNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFV 260
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
SLI+ + T+ V L + E G+ PD ++N + G++ +C E
Sbjct: 261 FNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSA-----GRMDKCKEI 315
Query: 347 SN 348
N
Sbjct: 316 FN 317
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G KP +ITY L+ + R K + + ++ +NG+ P+ + S++ A+ + ++
Sbjct: 43 GHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEA 102
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ ++R+MKE G + + + +NTL+ + G T+EA ++ E ++ +P+ T++ ++
Sbjct: 103 MKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDG-GVKPNQRTYNILVR 161
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDD-VVRALNRLPEL 313
+ + EA M +M+ +G +P+ +L + Y G+ R ++ ++ LNR
Sbjct: 162 AWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRR--- 218
Query: 314 GITPDDRFCGCLLN 327
+TP++R C ++N
Sbjct: 219 -VTPNERTCSIIVN 231
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ F L + +++ G+KP+ I +N++++ + + ++++M
Sbjct: 51 YTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMK 110
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++G P +T+ +L++ YG A E+ L + +++ G++ + YN L+ + +
Sbjct: 111 ESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENME 170
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA+ + M +S QPD+ T++++ + +G+ AE M EML PN + +
Sbjct: 171 EAWNMVYKMVAS-GMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSII 229
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ Y K D R + R+ ELG+ P+
Sbjct: 230 VNGYCKEGNMVDASRFVFRMKELGVLPN 257
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L++ + +P + +I+ + D G P TY +L+ A R + + L + +++E G
Sbjct: 19 LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
M+ L+N+++ ++ G EA ++F MK S C+P + TF+++I GK EA
Sbjct: 79 MKPDSILFNSIINAFSESGNMKEAMKLFRKMKES-GCKPTTSTFNTLIKGYGNAGKTEEA 137
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + + G +PN L++ + + ++ + ++ G+ PD
Sbjct: 138 LKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPD 187
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL----LDTMGRAKR 158
R+ PN S ++ Y GN MK +GV PN+ +N+L LDTM
Sbjct: 218 RVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTE-- 275
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
V + M +NG+ P+ T+++++ A+ A + ++ +M + ++ + ++
Sbjct: 276 --GVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSI 333
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L G ++A I M+ P+ +++I+ GK+ A ++ +M E
Sbjct: 334 LAKGYVRAGEPEKAESILTSMRKY-GVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEI 392
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G PNL +LI YG+A++ L + E G+ P
Sbjct: 393 GVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFP 431
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 44/80 (55%)
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ ++ + +GK EA ++FN +++ G +P L T+L+ + + ++R ++++ E
Sbjct: 17 TKLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEE 76
Query: 313 LGITPDDRFCGCLLNVMTQT 332
G+ PD ++N +++
Sbjct: 77 NGMKPDSILFNSIINAFSES 96
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI Y D + + + M GV P++ITYN++L+ + +A + V +
Sbjct: 459 DVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTF 518
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M + G PN TY L ++ +AR E+ L++ EM+ KG+ V + TL+ D
Sbjct: 519 KLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDN 578
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A+++F+ + T++ MI + + ++ AE +FN+M E GF P+ +
Sbjct: 579 GDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYT 638
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+I + K + L E G+ P G +LN +
Sbjct: 639 YRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 7/229 (3%)
Query: 118 YGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPN 177
YG G ++V+E M +P++ +YN +++ + + Q +Y M D G+ P+
Sbjct: 86 YGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPD 145
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFE 237
T+ ++++ R + M +G + S Y T++ + + EA E+FE
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
+M C PD F+ +I +G V E+E + N++L+ G PNLF + IQ + +
Sbjct: 206 EMLGLGIC-PDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQR 264
Query: 298 QRTDDVVRALNRLPELGITPD-----DRFCGCLLNVMTQTPKEELGKLV 341
++ +R L+ + G+TPD CG N + L K+V
Sbjct: 265 AMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMV 312
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G +P+ TYN+++D + I ++ G P+ +TY SL+ + +
Sbjct: 315 GYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRA 374
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++V+ E EKG++ ++ L NTL+ + G +A ++ +M S C PD WT++ +I
Sbjct: 375 INVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEM-SENGCSPDIWTYNLVIN 433
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G VS+A+ + + + G P++F +LI Y K + D+ + ++R+ G++P
Sbjct: 434 GLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSP 493
Query: 318 DDRFCGCLLNVMTQTPKEE 336
D +LN + + K E
Sbjct: 494 DVITYNSILNGLCKAGKYE 512
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + + +LI G+ D +NV+ E G+KPN++ N L+ + + Q +
Sbjct: 354 DESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLM 413
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM++NG SP+ TY ++ + D ++ + KG V +NTL+
Sbjct: 414 NEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKK 473
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D A EI + M + PD T++S++ GK + F M+E G PN+
Sbjct: 474 LKLDNAIEIVDRM-WNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIIT 532
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L + + KA++ ++ + + + G+TPD
Sbjct: 533 YNILTESFCKARKVEEALNLIEEMQNKGLTPD 564
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++EEM +G+ P+++ +N L+ T+ R + + + ++ G+SPN T ++ +
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFC 262
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ + + + + +G+ V YNTL+ +C + EA M +E +PD
Sbjct: 263 QRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVV-EAEHYLRKM-VNEGYEPD 319
Query: 249 SWTFSSMI-----------------------------TICS-----CR-GKVSEAEAMFN 273
+T++S+I T CS C+ G + A +FN
Sbjct: 320 GFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFN 379
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
E +E G +PNL + +L++ + ++ +N + E G +PD
Sbjct: 380 EAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPD 424
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 41/219 (18%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM---TDNGLSPNWNTYASLLRAYGRARYG 194
G K ++TY +++ +G ++ + E DNGL Y +R YGR
Sbjct: 35 GFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEG--VYIGAMRNYGRKGKI 92
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF-- 252
++ + V+ M + SV YN ++ + + Y D+A +++ M+ + PD +TF
Sbjct: 93 QEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMR-DKGIVPDVYTFTI 151
Query: 253 ---------------------------SSMITICSCRGKV------SEAEAMFNEMLEAG 279
SS + C+ G EA +F EML G
Sbjct: 152 RMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLG 211
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ LI + + R LN++ + G++P+
Sbjct: 212 ICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPN 250
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 114/295 (38%), Gaps = 46/295 (15%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEM 134
YI R K++E + D R + + +P+ +++ ++ + FD VY M
Sbjct: 79 YIGAMRNYGRKGKIQE-AVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRM 137
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
+ G+ P++ T+ + + R RP + + M G + Y +++ + +
Sbjct: 138 RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHR 197
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM---KSSEN------- 244
+ ++ EM G+ + +N L+ G+ E+ + + S N
Sbjct: 198 VEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF 257
Query: 245 ----CQ-------------------PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
CQ PD T++++I KV EAE +M+ G+E
Sbjct: 258 IQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE 317
Query: 282 PNLFVLTSLIQCY---GKAQRTDDVVR--ALNRLPELGITPDDRFCGCLLNVMTQ 331
P+ F S+I Y G Q D ++R A G PD+ L+N + Q
Sbjct: 318 PDGFTYNSIIDGYCKLGMMQNADQILRDGAFK-----GFVPDESTYCSLINGLCQ 367
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 6/213 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
+++E + D +++T+I G AG D +++EM G P + TYN L+ + +
Sbjct: 270 SKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGN 329
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
T++ +M PN TY L+R + + + MK +G + V YN
Sbjct: 330 VEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNV 389
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE---AEAMFNEM 275
L+ + G D+A +FE M E C P+ T++ +I+ R + + A M EM
Sbjct: 390 LIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEM 449
Query: 276 LEAGFEPNLFVLTSL---IQCYGKAQRTDDVVR 305
+E G+ P F+L + + G Q + D++R
Sbjct: 450 VERGYLPRRFMLNRVLNGLMLTGNQQLSRDLLR 482
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+++TYN L D R K + + ++M ++G++P TY +L+ + RA + +
Sbjct: 202 PDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNF 261
Query: 201 YREMKEKG-----MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ +MK++G + V Y T++ G D+A ++F++M S E C P T++++
Sbjct: 262 FLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEM-SKEGCPPTIATYNAL 320
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I + +G V +A +F++M+ + PN+ T LI+ + D ++ + R+ G
Sbjct: 321 IQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGC 380
Query: 316 TP 317
P
Sbjct: 381 EP 382
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 3/216 (1%)
Query: 106 IDPNAFSTLIKL--YGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+ + I++ Y GN L++++EM ++P + TY +L+D G+ R + +
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+K+ G+ P+ + +L+ + + + +EM + +NTL+
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGY 507
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+EA ++ ++MK +PD +++++I+ S RG + +A +F+EML GF+P
Sbjct: 508 CRERKVEEAKKLLDEMKE-RGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
L +LIQ Y K D L + GITPDD
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD 602
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 9/232 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+K+ D E + + PN ++T+I Y G F+ +++ MK +KP+ TYN+
Sbjct: 234 KKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSF 293
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE-DTLSVYR-EMKEK 207
+ + + +R + + ++ ++GL PN TY +L+ G G+ D YR EM +
Sbjct: 294 ISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALID--GCCNKGDLDKAFAYRDEMMNR 351
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVS 266
G+ SV YN L+ +EA ++ ++M+ + +PD T++ I C C G
Sbjct: 352 GIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR-EKGVEPDVVTYNIQINGYCRC-GNAK 409
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A ++F+EM+E P + TSLI +GK R + + + G+ PD
Sbjct: 410 KALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPD 461
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F+ +I + G + + M+ GVKPN++TYN +++ + I+K M
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
D L P+ TY S + + R E+ V ++ E G+ + YN L+ C + G
Sbjct: 279 KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDL 338
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D+AF + D + +T++ +I ++ EAE M EM E G EP++
Sbjct: 339 DKAFA-YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITP 317
I Y + + + + E I P
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRP 425
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 76 SYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK 135
S I V K R S+ +EK ++ E D F+ LI + GN D + +EM
Sbjct: 432 SLIDVFGKRNRMSEAEEKF--KKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMD 489
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
V P+ +T+N L+ R ++ + K + EM + G+ P+ +Y +L+ Y + +
Sbjct: 490 NAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMK 549
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
D L V+ EM G ++ YN L+ + +G D A E+ +M+ S+ PD T+ +
Sbjct: 550 DALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQ-SKGITPDDSTYLYV 608
Query: 256 I 256
I
Sbjct: 609 I 609
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
VYEEM + +K +++T+N +++ + R + + K M G+ PN TY +++ Y
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
E +++ MK+K ++ YN+ ++ +EA + + S P++
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES-GLVPNA 322
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++++I C +G + +A A +EM+ G ++F LI +R ++ +
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382
Query: 310 LPELGITPD 318
+ E G+ PD
Sbjct: 383 MREKGVEPD 391
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TLI Y G+ L V++EM ++G P ++TYN L+ + + +
Sbjct: 531 DHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELL 590
Query: 167 KEMTDNGLSPNWNTYASLLRA 187
+EM G++P+ +TY ++ A
Sbjct: 591 REMQSKGITPDDSTYLYVIEA 611
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 126/259 (48%), Gaps = 8/259 (3%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
A K+ EK D+ R + +++LIK + G + +Y++M P++
Sbjct: 466 AYKVYEKMLDSDCRT-----NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N +D M +A P + + +++E+ P+ +Y+ L+ +A + +T ++ MKE
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+G L YN ++ G ++A+++ E+MK ++ +P T+ S+I + ++
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK-TKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
EA +F E E N+ + +SLI +GK R D+ L L + G+TP+ LL
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 327 NVMTQTPKEELGKLVECVE 345
+ + + EE+ + + C +
Sbjct: 700 DALVKA--EEINEALVCFQ 716
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ I +G G D + E++A G+KP+ +TY +++ + +A R + ++
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ + N P Y +++ YG A ++ S+ + KG SV YN +L +
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA ++FE+MK ++ P+ T++ +I + GK+ A + + M +AG PN+
Sbjct: 357 GKVDEALKVFEEMK--KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-RFC 322
+ ++ K+Q+ D+ + TPD+ FC
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 3/214 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D A++ +I + G + + EEMK G +P ++TY +++D + + R + +
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++E + N Y+SL+ +G+ ++ + E+ +KG+ ++ +N+LL
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+EA F+ MK + C P+ T+ +I +C R K ++A + EM + G +P+
Sbjct: 705 AEEINEALVCFQSMKELK-CTPNQVTYGILINGLCKVR-KFNKAFVFWQEMQKQGMKPST 762
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T++I KA + +R G PD
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 124/286 (43%), Gaps = 8/286 (2%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
+V + M+ +P Y L+ + T++++M + G P + + +L+R +
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ + LS+ EMK + + LYN + VG D A++ F +++++ +PD
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPD 272
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T++SMI + ++ EA MF + + P + ++I YG A + D+ L
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN----SKLGYVVKLLLEEQD 363
R G P C+L + + K +E K+ E ++K S ++ +L
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 364 IEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
++ F+ + + +V+ N ++D L+ AC + E
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTV--NIMVDRLCKSQKLDEACAMFE 436
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 1/182 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A++++ ++ +S+LI +G G D + EE+ G+ PN+ T+N+LLD + +A+
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M + +PN TY L+ + R ++EM+++GM+ S Y T
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+++ A G EA +F+ K++ PDS +++MI S + +A ++F E
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 279 GF 280
G
Sbjct: 827 GL 828
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 11/227 (4%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI + AG D + + M+ G+ PN+ T N ++D + ++++ + +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++EM +P+ T+ SL+ G+ +D VY +M + + + +Y +L+ +
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++ +I++DM ++NC PD ++ + G+ + AMF E+ F P+
Sbjct: 495 HGRKEDGHKIYKDM-INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR--------FCGC 324
+ LI KA ++ + E G D R FC C
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 86 RASKLKEKSYDTRARNEKWRIDP--NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+A+KL+E YD K++ P +A++TLI + + D L ++++M+ +G +P +
Sbjct: 145 KANKLRE-GYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ L+ + R ++ EM + L + Y + ++G+ + + E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
++ G++ Y +++ + DEA E+FE ++ + P ++ +++MI G
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAG 322
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
K EA ++ G P++ ++ C K + D+ ++ +
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ ++ G D L V+EEMK PN+ TYN L+D + RA + + M
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
GL PN T ++ +++ ++ +++ EM K + +L+ VG
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D+A++++E M S+ C+ +S ++S+I G+ + ++ +M+ P+L +L +
Sbjct: 464 DDAYKVYEKMLDSD-CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ C KA + + PD R
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT------------------------ 180
+YN+LL M R + + I EM+ G P+ NT
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 181 -----------YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
Y +L+ A+ + + L+++++M+E G + +V L+ TL+ A G
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D A + ++MKSS + D ++ I GKV A F+E+ G +P+ TS
Sbjct: 220 DSALSLLDEMKSS-SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 290 LIQCYGKAQRTDDVVRALNRL 310
+I KA R D+ V L
Sbjct: 279 MIGVLCKANRLDEAVEMFEHL 299
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 9/159 (5%)
Query: 69 KTGSSPKSYIW--VNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNF 124
+ G +P Y W + +A ++ E ++ E + PN + LI F
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE-LKCTPNQVTYGILINGLCKVRKF 743
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+ ++EM+ G+KP+ I+Y ++ + +A + ++ NG P+ Y ++
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLS----VTLYNTL 219
+ D S++ E + +G+ + V L +TL
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGV-KPNMITYNNLLDTMGRAKRPWQV 162
++P+ F+TLI G + L++ EEMK + +PN +TYN L+D +A +
Sbjct: 353 VEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRA 412
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++++M + G+ PN T +L+ + + + EMK KG++ + Y L++
Sbjct: 413 HELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISA 472
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
V + A + FE+M SS C PD+ + S+I+ G++++A + +++ AGF
Sbjct: 473 FCGVNNINRAMQCFEEMLSS-GCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSL 531
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI + K ++ + V L + E G+ PD
Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPD 567
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N LL +GR + ++ + EM + P+ T+ L+ +AR ++ L V+ ++
Sbjct: 285 NALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRG 344
Query: 207 KG------MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
KG ++ V L+NTL+ VG ++ + E+MK +P++ T++ +I
Sbjct: 345 KGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFF 404
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
G A +F +M E G +PN+ L +L+ K R V N + G+
Sbjct: 405 KAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGL 459
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 114/254 (44%), Gaps = 28/254 (11%)
Query: 70 TGSSPKSYIW------------VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKL 117
+G SP + ++ +N S SKLK + +D + ++ LI
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFS---------LDRSCYNVLISG 542
Query: 118 YGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPN 177
+ + + EM+ GVKP+ ITYN L+ +G+ + ++M GL P+
Sbjct: 543 FCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPS 602
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTLYNTLL-AMCADVGYTDEAFEI 235
TY +++ AY + ++ + ++ EM + + +YN L+ A+C + D A +
Sbjct: 603 VVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRN-NDVDRAISL 661
Query: 236 FEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF---VLTSLIQ 292
EDMK + +P++ T+++++ + + +A + + M+E P+ VLT +
Sbjct: 662 MEDMK-VKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLS 720
Query: 293 CYGKAQRTDDVVRA 306
G+ ++ V
Sbjct: 721 AVGEIEKLKHFVEG 734
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 97/220 (44%), Gaps = 8/220 (3%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + + L+ G + + EM+ ++P+++T+ L++ + +A+R + +
Sbjct: 279 VDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQV 338
Query: 166 YKEMTDN------GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL-YNT 218
+ + G+ P+ + +L+ + ED LS+ EMK + T+ YN
Sbjct: 339 FDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNC 398
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ G D A E+F M + E QP+ T ++++ G+V A FNEM
Sbjct: 399 LIDGFFKAGNFDRAHELFRQM-NEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGK 457
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + N T+LI + + ++ + G +PD
Sbjct: 458 GLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPD 497
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 87/212 (41%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + +LI AG + V ++K G + YN L+ + K+ +V +
Sbjct: 497 DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELL 556
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + G+ P+ TY +L+ G+ V +M ++G++ SV Y ++
Sbjct: 557 TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSK 616
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
DE +IF +M S+ P++ ++ +I V A ++ +M PN
Sbjct: 617 KNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTT 676
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++++ + ++R+ E PD
Sbjct: 677 YNAILKGVRDKKMLHKAFELMDRMVEEACRPD 708
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+V +++KA G+ P++ TYN+L+D G A + V + KEM + G+SP T+ L+
Sbjct: 147 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 206
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y + + V+ EMK++G+ SV YN+L++ G +E ++ E+M+
Sbjct: 207 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL-GL 265
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
P+ TF ++ +G +++A + M E EP++ + LI Y + + +D +
Sbjct: 266 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 325
Query: 306 ALNRLPELGITPDDRFCGCLLNVMTQT 332
+ + GI+P+ CL+ +++
Sbjct: 326 VKEAMAKKGISPNVTTYNCLITGFSRS 352
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I P A F LI Y N + V+EEMK G+ +++TYN+L+ + + +
Sbjct: 195 ISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGV 254
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM D GLSPN T+ +L+ + + D M E+ ++ V +YN L+ +
Sbjct: 255 KLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVY 314
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G ++A + E M + + P+ T++ +IT S G A + +EM E G E +
Sbjct: 315 RRLGKMEDAMAVKEAM-AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 373
Query: 284 LF---VLTSLIQCYGKAQRT 300
+ VL + C G+ T
Sbjct: 374 VVTYNVLIGALCCKGEESMT 393
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P+ T+NNL++ G + + K+MTDNG+ P+ T+ +L AY L
Sbjct: 1 IPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKAL 60
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN-CQPDSWTFSSMIT 257
S + MK ++ T N ++ V +A EIF M+ + C+PD TF+S+I
Sbjct: 61 SYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIH 120
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ S RG++ + +A+F+ ML G +PN+ +LI Y + + + G P
Sbjct: 121 LYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCP 180
Query: 318 D 318
D
Sbjct: 181 D 181
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 133/325 (40%), Gaps = 72/325 (22%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN---------- 147
R + + R D F+++I LY G + C V+ M A G+KPN+++YN
Sbjct: 102 REKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHG 161
Query: 148 -------------------------NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
+L+ T GR+++P + + ++ M N PN +Y
Sbjct: 162 MDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYN 221
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA------------------ 224
+L+ AYG Y + + REM++ G+ +V TLLA C
Sbjct: 222 ALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELR 281
Query: 225 -----------------DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
++G ++A ++ M+ ++ +PDS TF+ +I+ C K E
Sbjct: 282 GIHLNTIACNSAIGSYMNIGEYEKAINLYRSME-NKTTKPDSVTFTILISGCCRMSKYEE 340
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
A F EML+ + + +S+I Y K + N L G PD ++N
Sbjct: 341 ALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMIN 400
Query: 328 VMTQTPK-EELGKLVECVEKSNSKL 351
+ + E++ L + +E +N +L
Sbjct: 401 AYSASEMWEKVCALYQEMEANNIQL 425
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 3/209 (1%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
+ ++ Y + + L+ +E MK ++P+ T N ++ + + K+ Q I+ M +
Sbjct: 44 NIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMRE 103
Query: 172 --NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ P+ T+ S++ Y ED +V+ M +G++ ++ YN L++ A G
Sbjct: 104 KRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMD 163
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EAF +F++MK S C PD +++S+I+ + + A +F+ M +PNL +
Sbjct: 164 KEAFSVFDEMKRSGFC-PDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNA 222
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ YG V L + + GI P+
Sbjct: 223 LMDAYGSNGYLPQAVDILREMEQDGIHPN 251
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 93/241 (38%), Gaps = 38/241 (15%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A ++ I Y G ++ +N+Y M+ KP+ +T+ L+ R + + +KEM
Sbjct: 289 ACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEM 348
Query: 170 TD-----------------------------------NGLSPNWNTYASLLRAYGRARYG 194
D +G P+ TY +++ AY +
Sbjct: 349 LDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMW 408
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP-DSWTFS 253
E ++Y+EM+ +QL + L+ + E MK E P + F
Sbjct: 409 EKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMK--EKGIPFNDANFF 466
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
M++ CS +A + N M + +L + L+Q GK+ +T+ +++ R L
Sbjct: 467 EMLSACSILRDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVAL 526
Query: 314 G 314
G
Sbjct: 527 G 527
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 12/281 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM- 169
S++I+ YG AG FD L +Y++M +G + I++N LL K+ +V+ ++ EM
Sbjct: 103 LSSIIRSYGIAGMFDHALKIYDQMDDLGTPRSAISFNVLLSACVNTKQYDRVRQLFDEMP 162
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P+ +Y L+R+Y E + +EM+EKG++++ + TLL G
Sbjct: 163 VKYGFLPDKVSYGILIRSYCEMGLPEKAMERLKEMEEKGVEITAITFTTLLHAFYKKGMG 222
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA-EAMFNEMLEAGFEPNLFVLT 288
DEA +++ +M ++ C PD ++ + I + +G E +A+ EM AG +P+
Sbjct: 223 DEAEKVWNEM-VNKGCGPDVGAYN--VKIRNIQGGDPEGVKALIEEMNNAGLKPDTISYN 279
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV--ECVEK 346
L+ CY + D+ + L G P+ L+ + + + E G V E V
Sbjct: 280 YLMTCYCENGLMDEAQKVYEDLETNGCNPNAATFRSLILYLCKKGRFETGYKVFKESVRV 339
Query: 347 SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAY 387
+ +K L +EG K+E + +S+ VKK +
Sbjct: 340 NKMPDFNTLKCL-----VEGLVKREKLKDAKGMSRTVKKKF 375
>gi|303280720|ref|XP_003059652.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458307|gb|EEH55604.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD 171
S LI G + + L V+EEM+A GV+ N+ TY+ L+ + K+ + I++
Sbjct: 31 SALINACGKSRQWKKALEVFEEMRAEGVEANIYTYSALISACAKGKQLDKALEIFELCKV 90
Query: 172 NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDE 231
NG+ P+ TY +++ A + R + L ++ +MK+ GM+ + YN LLA C G D+
Sbjct: 91 NGVEPDGITYGAMISACEKGRRVDKALEIFVQMKKAGMEANAITYNALLAACERAGKADD 150
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITIC 259
A E+F+DMK + +PD +++I C
Sbjct: 151 AREVFDDMK-RDGIKPDRVAHAALIGAC 177
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
GRA + ++ M G+ N T ++L+ A G++R + L V+ EM+ +G++ ++
Sbjct: 3 GRAGAWEKAVELHDHMKAKGMGANTITCSALINACGKSRQWKKALEVFEEMRAEGVEANI 62
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
Y+ L++ CA D+A EIFE K + +PD T+ +MI+ C +V +A +F
Sbjct: 63 YTYSALISACAKGKQLDKALEIFELCKVN-GVEPDGITYGAMISACEKGRRVDKALEIFV 121
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+M +AG E N +L+ +A + DD + + GI PD
Sbjct: 122 QMKKAGMEANAITYNALLAACERAGKADDAREVFDDMKRDGIKPD 166
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 95/179 (53%), Gaps = 2/179 (1%)
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW 178
G AG ++ + +++ MKA G+ N IT + L++ G++++ + +++EM G+ N
Sbjct: 3 GRAGAWEKAVELHDHMKAKGMGANTITCSALINACGKSRQWKKALEVFEEMRAEGVEANI 62
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
TY++L+ A + + + L ++ K G++ Y +++ C D+A EIF
Sbjct: 63 YTYSALISACAKGKQLDKALEIFELCKVNGVEPDGITYGAMISACEKGRRVDKALEIFVQ 122
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI-QCYGK 296
MK + + ++ T+++++ C GK +A +F++M G +P+ +LI C G+
Sbjct: 123 MKKA-GMEANAITYNALLAACERAGKADDAREVFDDMKRDGIKPDRVAHAALIGACVGE 180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S LI D L ++E K GV+P+ ITY ++ + +R + I+ +M
Sbjct: 65 YSALISACAKGKQLDKALEIFELCKVNGVEPDGITYGAMISACEKGRRVDKALEIFVQMK 124
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ N TY +LL A RA +D V+ +MK G++ + L+ C
Sbjct: 125 KAGMEANAITYNALLAACERAGKADDAREVFDDMKRDGIKPDRVAHAALIGACVGEERYQ 184
Query: 231 EAFEIFEDMK 240
A + ++ MK
Sbjct: 185 AAIDAYKAMK 194
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C G ++A E+ + MK+ + ++ T S++I C + +A +F EM G E
Sbjct: 2 CGRAGAWEKAVELHDHMKA-KGMGANTITCSALINACGKSRQWKKALEVFEEMRAEGVEA 60
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
N++ ++LI K ++ D + G+ PD G +++
Sbjct: 61 NIYTYSALISACAKGKQLDKALEIFELCKVNGVEPDGITYGAMISA 106
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 32/324 (9%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
K + P A F+TLI Y +GN + + M+ V P++ TY+ L+D + + +
Sbjct: 259 RKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQL 318
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++KEM D GL PN T+ +L+ + + L +Y++M KG++ + LYNTL
Sbjct: 319 EDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTL 378
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ GY EA + +M + PD +T+++++ G + A M EM++ G
Sbjct: 379 IDGLCKGGYFREARKFVGEM-TKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG 437
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+ + T++I + + D R L + G+ PDD G VM K
Sbjct: 438 IQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDD---GTYTMVMDGFCK----- 489
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEAT--ELFNSISKDVKKAYCNCLIDLCVN 397
K + K+G+ LL+E +G T L N + K + + L++ +N
Sbjct: 490 ------KGDVKMGFK---LLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLN 540
Query: 398 LN----------LLENACKLLELG 411
L LL+ CK +LG
Sbjct: 541 LGVVPDDITYNILLQGHCKHGKLG 564
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 17/226 (7%)
Query: 109 NAFSTLIKLYGTAGN---FDGCLNVYEEMKAIG---------VKPNM-ITYNN---LLDT 152
+ F+++++ GT + FD ++VY E + K N+ I +N LL+
Sbjct: 147 SVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLER 206
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
M + P Y E+ D+G PN T+ L+ + +D ++ E+++ G+Q +
Sbjct: 207 MIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPT 266
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
+NTL+ G +E F + M+ PD +T+S++I ++ +A +F
Sbjct: 267 AVSFNTLINGYCKSGNLEEGFRLKMVMEEFR-VFPDVFTYSALIDGLCKECQLEDANHLF 325
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EM + G PN T+LI K R D + ++ G+ D
Sbjct: 326 KEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKAD 371
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 110/251 (43%), Gaps = 19/251 (7%)
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
L Y E+ + G +V +N L+ G +A IF++++ + QP + +F+++I
Sbjct: 217 LEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKT-GLQPTAVSFNTLIN 275
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G + E + M E P++F ++LI K + +D + + G+ P
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335
Query: 318 DDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIE----GDFKKEAT 373
+D L+N + + +L +E ++ +K G L+L I+ G + +EA
Sbjct: 336 NDVTFTTLINGQCKNGRVDLA--LEIYQQMFTK-GLKADLVLYNTLIDGLCKGGYFREAR 392
Query: 374 ELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLK 433
+ ++K + D LL+ +CK +L L LE+ ++ + + L
Sbjct: 393 KFVGEMTKR------GLIPDKFTYTTLLDGSCKEGDLELALEMRKEM-----VKEGIQLD 441
Query: 434 SLSLGAALTAL 444
+++ A ++ L
Sbjct: 442 NVAFTAIISGL 452
>gi|359487102|ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 390
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 111/229 (48%), Gaps = 4/229 (1%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
+++ + G + C +EEM GV ++ +Y+ +D ++ +PW+ +YKEM G
Sbjct: 143 ILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKG 202
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
+ + Y +++RA G + + ++ V+REMKE G + +V YNT++ + + G EA+
Sbjct: 203 IRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAY 262
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC 293
+F+ M+ + P+ T+ C K + F+ M+ +G P + L++
Sbjct: 263 GVFDQMR-EKGYAPNVITYHCFF---GCIEKPKQILRTFDRMINSGVRPRMDTYVMLMKK 318
Query: 294 YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
+G+ V ++ E G +PD L++ + Q +L + E
Sbjct: 319 FGRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYE 367
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+D A++T+I+ G + D + V+ EMK +G +PN++TYN ++ + R +
Sbjct: 204 RLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYG 263
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M + G +PN TY +G + L + M G++ + Y L+
Sbjct: 264 VFDQMREKGYAPNVITYHCF---FGCIEKPKQILRTFDRMINSGVRPRMDTYVMLMKKFG 320
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
G+ F +++ M+ + C PD+ ++++I +G V A EML G
Sbjct: 321 RWGFLRPVFIVWKKME-EQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKG 374
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
++ F +++ Y + + + M+ V PN+ +N+LL + ++K + + I
Sbjct: 109 LNVETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEI 168
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M D + P+ TY+ LL +G+A ++REM + G + Y ++ +
Sbjct: 169 FNGMKDQFI-PDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCK 227
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA I ++M SS C+P S+ +S ++ ++ +A F +M E ++
Sbjct: 228 AGRVDEAVGIVKEMDSSV-CKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVA 286
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
V +LI + K + + R LN + GI P+ R C +LN
Sbjct: 287 VYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILN 328
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 120/293 (40%), Gaps = 43/293 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S L++ +G A N ++ EM +G P+++TY ++D + +A R + I
Sbjct: 179 DSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIV 238
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMC-- 223
KEM + P Y+ L+ YG ED + + +M+ ++ V +YN L+ A C
Sbjct: 239 KEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKV 298
Query: 224 --------------------------------ADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G TDEAF +F M C PD+ T
Sbjct: 299 NKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV--CDPDADT 356
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++ MI + K+ A ++ M F P++ + LI K L +
Sbjct: 357 YTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMI 416
Query: 312 ELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDI 364
E GI P G L ++ + +E++ + ++ K+ +VK L +Q+I
Sbjct: 417 EKGIRPSSVTFGKLKQLLIKEGREDVLEFLQ------EKMNLLVKEPLCDQEI 463
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ FS ++ + A + ++E MK K + T N+LLD++GRAK + + +++
Sbjct: 164 DTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFEN 223
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ +PN TY LL + + + + SV+ EM +KG + + +N +L
Sbjct: 224 LKGR-FTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQ 282
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+A ++F MK ++ PD +++ +I + K+ EA F EM+++G +P+ V T
Sbjct: 283 RSDAIKLFMVMK-AKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYT 341
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
LI +G +R D V L + E G PD L+ +MT+
Sbjct: 342 CLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTR 384
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN+ TY LL+ + K + +++ EM D G P+ + +L R++ D + +
Sbjct: 230 PNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKL 289
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ MK KG V Y L+ +EA E F++M S C+PD+ ++ +IT
Sbjct: 290 FMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDS-GCKPDAAVYTCLITGFG 348
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
R ++ + EM E G P+ +LI+ + + DD R ++ + GI P
Sbjct: 349 NRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIH 408
Query: 321 FCGCLLNVMTQTPKEELGKLV 341
++ QT E+G+ V
Sbjct: 409 TYNMIMKSYFQTRNYEMGRAV 429
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 101 NEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
N K R PN ++ L+ + N +V+ EM G KP+++ +N +L+ + R+K+
Sbjct: 223 NLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQ 282
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
++ M G SP+ +Y L+R R E+ + ++EM + G + +Y
Sbjct: 283 RSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTC 342
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ + D +++ ++MK E C PD T++++I + + +A ++ +M ++
Sbjct: 343 LITGFGNRKRMDMVYDLLKEMK-EEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQS 401
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRAL-NRLPELGITPDD 319
G EP + +++ Y + R ++ RA+ + + G PDD
Sbjct: 402 GIEPTIHTYNMIMKSYFQT-RNYEMGRAVWDEMSRKGFCPDD 442
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 71 GSSP--KSYIWVNPKSPRASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G SP +SY + R SK++E Y + + D ++ LI +G D
Sbjct: 297 GPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMV 356
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
++ +EMK G P+ +TYN L+ M R K P IYK+MT +G+ P +TY ++++
Sbjct: 357 YDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKS 416
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
Y + R E +V+ EM KG Y L+ G + EA + E+M
Sbjct: 417 YFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEM 468
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI+ + + ++EM G KP+ Y L+ G KR V +
Sbjct: 301 DVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLL 360
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + G P+ TY +L++ R + +D +Y++M + G++ ++ YN ++
Sbjct: 361 KEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQT 420
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE-PNL 284
+ ++++M C PD +++ +I +G+ EA EMLE G + P L
Sbjct: 421 RNYEMGRAVWDEMSRKGFC-PDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQL 478
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ ++ MKA G P++ +Y L+ + R + + ++EM D+G P+ Y L+
Sbjct: 287 IKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITG 346
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+G + + + +EMKE+G YN L+ + + D+A I++ M S +P
Sbjct: 347 FGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQS-GIEP 405
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
T++ ++ A+++EM GF P+ T LI R+ + + L
Sbjct: 406 TIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYL 465
Query: 308 NRLPELGI 315
+ E G+
Sbjct: 466 EEMLEKGM 473
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 110/277 (39%), Gaps = 48/277 (17%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM----------------------- 209
G + TY S++ + R E +S+ EM KG+
Sbjct: 124 GFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLTMDTFSIAMRAFAAAKERKKAV 183
Query: 210 -----------QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
++ V N LL EA +FE++K P+ T++ ++
Sbjct: 184 AMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKG--RFTPNLRTYTVLLNG 241
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EA +++NEM++ GF+P++ +++ ++++ D ++ + G +PD
Sbjct: 242 WCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPD 301
Query: 319 DRFCGCLLNVM-TQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFN 377
R L+ + Q+ EE + + + S K V L I G ++ ++
Sbjct: 302 VRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCL----ITGFGNRKRMDMVY 357
Query: 378 SISKDVKKAYC-------NCLIDLCVNLNLLENACKL 407
+ K++K+ C N LI L L + ++A ++
Sbjct: 358 DLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARI 394
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 6/239 (2%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
+SP S + S D R+ PN F+ L+ + + G L+ M+ G+
Sbjct: 179 RSPSTSP--QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLS 236
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+ +TYN LL+ R + + + M +G++P TY +L+ AY R + + V
Sbjct: 237 PDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKV 296
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC- 259
M G + + YN L A G DEAF + ++M+ PD T++++ C
Sbjct: 297 VEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACF 356
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
CR S+A + EM E G + L +I+ K + + LN++ + G+ PD
Sbjct: 357 KCRCS-SDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPD 414
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 135/297 (45%), Gaps = 12/297 (4%)
Query: 121 AGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
AG D + +EM+ +G + P+++TYN L D + + + +EM + G+
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
T+ +++ + E L +M + G+ V YNTL+ G +A+ + ++M
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ D++T ++++ + EA+ + + GF P+ +++ Y K
Sbjct: 442 -VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP--KEELGKLVECVEKS----NSKLGY 353
++ +R + + E +TP L+ +++ KE + KL E +EK ++
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560
Query: 354 VVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLID-LCVNLNLLENACKLLE 409
++ +E D+E F+ + NS DV CN L++ LC+N L+ A KL E
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDV--VTCNTLMNGLCLN-GKLDKALKLFE 614
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 22/270 (8%)
Query: 65 YPHGKTGSSPKSYIWVNPKSPRASKL-------------KEKSYD------TRARNEKWR 105
+ H K G+ K+Y ++ R KL KEK Y+ +
Sbjct: 423 HAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFM 482
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D ++ T++ Y N + L +++EM + P++ TYN L+ + R R +
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK 542
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
E+ + GL P+ TY ++ AY + E+ + +M E + V NTL+ +C
Sbjct: 543 LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCL 602
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G D+A ++FE + + D T++++I G V A F +M G +P+
Sbjct: 603 N-GKLDKALKLFESW-VEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDA 660
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
F ++ +A RT++ L++L E G
Sbjct: 661 FTYNVVLSALSEAGRTEEAQNMLHKLAESG 690
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + AGN + +EM G+K + T N +L + + KR + + +
Sbjct: 414 DVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLL 473
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G P+ +Y +++ AY + E L ++ EM EK + S++ YNTL+ + +
Sbjct: 474 QSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRM 533
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA + ++ + PD T++ +I G + A N+M+E F+P++
Sbjct: 534 GRLKEAIDKLNELM-EKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVT 592
Query: 287 LTSLI 291
+L+
Sbjct: 593 CNTLM 597
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D ++ +I + +GN + ++++MK G KP T+N L+ G A +P + +K +
Sbjct: 127 DSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKML 186
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ D + PN TY L+RA+ + E+ +V +M G+Q V YN L A
Sbjct: 187 HLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQ 246
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G T A ++ +M+ E P+ T ++ G + EA M E G PNL
Sbjct: 247 KGETLRAEDLILEMQ-YEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLV 305
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ SLI+ + TD V AL + E G+ PD
Sbjct: 306 IFNSLIKGFLDITDTDGVDEALTLMEEYGVKPD 338
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 9/241 (3%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ L++ + + N + NV +M A G++P+++TYN L + + +
Sbjct: 195 VKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAE 254
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM ++PN T ++ Y + + L MKE G+ ++ ++N+L+
Sbjct: 255 DLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGF 314
Query: 224 ADVGYTD---EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
D+ TD EA + E+ +PD TFS+++ S G + + + +FN+M +AG
Sbjct: 315 LDITDTDGVDEALTLMEEY----GVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGI 370
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
EP++ + L + Y +A T++ L + + G+ P+ C +++ K E K+
Sbjct: 371 EPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKM 430
Query: 341 V 341
V
Sbjct: 431 V 431
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 105/201 (52%), Gaps = 6/201 (2%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++ + G +P +ITY L+ + + K + + ++ +NG+ P+ Y +++ A+
Sbjct: 80 IFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFS 139
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ + ++++MK+ G + + + +NTL+ + G +E ++ M + +P+
Sbjct: 140 ESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPND 199
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++ ++ + + EA + ++M+ +G +P++ L + Y + T +RA +
Sbjct: 200 RTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGET---LRAEDL 256
Query: 310 LPEL---GITPDDRFCGCLLN 327
+ E+ + P++R CG ++N
Sbjct: 257 ILEMQYEKVAPNERTCGIIVN 277
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 85/171 (49%), Gaps = 2/171 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L++ + +P + I+ + ++G P TY +L+ A + ++ E + +++E G
Sbjct: 64 LMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENG 123
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
M+ LYN ++ ++ G EA +IF+ MK + C+P + TF+++I GK E
Sbjct: 124 MKPDSILYNAMINAFSESGNVKEAMKIFQKMKDT-GCKPTTSTFNTLIKGYGNAGKPEEG 182
Query: 269 EAMFNEM-LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M + M L+ +PN L++ + + ++ L+++ GI PD
Sbjct: 183 LKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPD 233
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R ++ + PN F++LIK + + DG M+ GVKP++IT++ +++ A
Sbjct: 294 RMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAG 353
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + I+ +M G+ P+ + ++ L + Y RA E+ SV M + G++ +V +
Sbjct: 354 LMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICT 413
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
T+++ W CS GK+ A+ ++ +M E
Sbjct: 414 TIIS---------------------------GW--------CSA-GKMENAKMVYEKMCE 437
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G PNL +LI Y +A++ L + E G+ P+
Sbjct: 438 IGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPE 478
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ ++ I +GK EA +F+ ++E G P L T+L+ K + + + ++++ E
Sbjct: 62 TKLMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEE 121
Query: 313 LGITPDDRFCGCLLNVMTQT 332
G+ PD ++N +++
Sbjct: 122 NGMKPDSILYNAMINAFSES 141
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 2/229 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
EK + + FS ++ + A + ++E MK + + T N LLD++GRAK +
Sbjct: 168 EKRLLTLDTFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKE 227
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ ++ ++ + +PN TY LL + R + + ++ EM ++G + + +N +L
Sbjct: 228 AQALFGKL-EGRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLE 286
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+A + FE MK+ + PD +++ +I + K+ EA F EM+++G
Sbjct: 287 GLLRSKKRSDAIKFFEVMKA-KGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCH 345
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
P+ V T L+ YG +R D V L + E G PD + L+ +MT
Sbjct: 346 PDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMT 394
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R PN ++ L+ + N ++ EM G KP+++T+N +L+ + R+K+
Sbjct: 238 RFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDA 297
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++ M G SP+ +Y L+R + ++ + + EM + G +Y L+
Sbjct: 298 IKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTG 357
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ D +E+ ++MK + C PD T++++I + + + +A ++ +M++ G EP
Sbjct: 358 YGNHKRMDMVYELLKEMKE-KGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEP 416
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR----FCGCLLNVMTQTPKEELG 338
++ +++ Y + + + + + + G PDD F G L+ +Q EE
Sbjct: 417 SIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLI---SQGRSEEAC 473
Query: 339 K-LVECVEK 346
K L E +EK
Sbjct: 474 KYLEEMIEK 482
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI+ + + EM G P+ Y L+ G KR V +
Sbjct: 312 DVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELL 371
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + G P+ TY +L++ R +D + +Y++M + G++ S+ YN ++ +
Sbjct: 372 KEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRI 431
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE-PNL 284
+ ++++M C PD +++ I +G+ EA EM+E G + P L
Sbjct: 432 RNYEMGHAVWDEMSKKGFC-PDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQL 489
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ +E MKA G P++ +Y L+ + + + + + EM D+G P+ Y L+
Sbjct: 297 AIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMT 356
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
YG + + + +EMKEKG YN L+ + D+A I++ M + +
Sbjct: 357 GYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQN-GIE 415
Query: 247 PDSWTFSSMITICSCRGKVSE-AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
P ++ +MI R + E A+++EM + GF P+ T I R+++ +
Sbjct: 416 PSIHSY-NMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACK 474
Query: 306 ALNRLPELGI 315
L + E G+
Sbjct: 475 YLEEMIEKGM 484
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LIKL + D + +Y++M G++P++ +YN ++ + R + ++
Sbjct: 382 DGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVW 441
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM+ G P+ N+Y + E+ EM EKGM+ YN A +
Sbjct: 442 DEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRA 501
Query: 227 GYTDEAFEIFEDMKSS 242
G D E+ + MK S
Sbjct: 502 GKPDILEELAQKMKFS 517
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
G + TY S++ +AR E +S+ EM EK + L++ ++ + A +A
Sbjct: 135 GFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRL-LTLDTFSIAMRAFAAAKERKKA 193
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS-EAEAMFNEMLEAGFEPNLFVLTSLI 291
IFE MK+ + + T ++++ R K+ EA+A+F + LE F PNL T L+
Sbjct: 194 VGIFELMKNHK-YRVGVETINALLDSLG-RAKLGKEAQALFGK-LEGRFTPNLRTYTVLL 250
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
+ + + + R N + + G PD
Sbjct: 251 NGWCRVKNLMEAGRIWNEMLDEGFKPD 277
>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
Length = 796
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 2/220 (0%)
Query: 100 RNEKWRIDPN-AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R +KW + +FS L+ YG +F V ++KA + YN L+ G+A +
Sbjct: 126 RRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLADLKADKCPMTTVAYNTLIKVYGKAHK 185
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ YKEM D+ P+ T+ +L+ Y A E L VY EM++ G L Y
Sbjct: 186 LDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEV 245
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ VG D A +FE MK +E QP++ +S++I G++ F EM
Sbjct: 246 VVPHAGKVGRLDLACMLFERMK-AEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSL 304
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P L SLI+ Y K+ R + ++ + P+
Sbjct: 305 EIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPN 344
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/452 (19%), Positives = 181/452 (40%), Gaps = 46/452 (10%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + E + + A+S LI +G + +EEM+++ ++P + T+ +L++ ++
Sbjct: 265 RMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIRPLLGTFASLIEAYCKSG 324
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R +K+M PN YA+L+ A+ +A + L Y M+ G+ L ++
Sbjct: 325 RLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWLPPLIFA 384
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G + A ++ +M+ +P +T ++ + GK + E + EM E
Sbjct: 385 VLIEQHAQAGKAETAVRLYREMRGV-GLRPSHFTCRIVVGAVAKGGKYDDVERILFEMQE 443
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN-VMTQTPKEE 336
G V S+++ +R D ++ G TP C +L+ ++ E
Sbjct: 444 MGLNVADAVNDSIVKLVDD-KRISDAWELFLKVTGHGFTPHVSLCREILHGFLSCGDMEH 502
Query: 337 LGKLVECVEKSNSKLG---YVVKL-------LLEEQDIEGDFKKEA-------------- 372
+++ +++ S + Y + L LE +++ F +E
Sbjct: 503 ARQMLSFMQRPGSAVDLRTYCMLLEFFLRGSRLEHEEVIISFMRETKHPAHSFLCGLMGS 562
Query: 373 -----------------TELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLE 415
+EL + ++ N L++ V + A ++ +
Sbjct: 563 SKHRKGQSLADYIKSFYSELEAEVDFKTRRYLTNVLLNYLVVMGQERKARSFWKVVYQIH 622
Query: 416 VYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKH 474
+Y + I + W L ++S+S+GAAL + + + + P + I TG K
Sbjct: 623 MYPNSIVLQGDLTWCLKVRSMSIGAALIGVLCTLEKFRERILKRRFVPQRIKILTG-SKA 681
Query: 475 KYSDKGLASVFESHLKELNAPFHDSPDKVGWF 506
+ E+ +K L++PF + +G F
Sbjct: 682 DSDAIAVRQAIEAMMKPLDSPFIFQDEDLGSF 713
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 12/228 (5%)
Query: 107 DPNAFSTLIKLYGTAG---NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
DP ++ +I + + FD ++ + M V N+ T N L+ G +
Sbjct: 132 DPFLYNRIILILSRSNLSDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGDTEDLQMCL 191
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
+ K+ GL N TY LL+AY R+R VY E++ G +L + YN LL A+
Sbjct: 192 RLVKKW---GLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDAL 248
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
D ++A ++FEDMK +C+ D ++++ MI GK EA +FNEM+ G
Sbjct: 249 AKD----EKACQVFEDMKK-RHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTL 303
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
N+ +L+Q K + D ++ +R+ E G P++ +LN++
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLV 351
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+++ ++++ AG + + ++ GV + + YN + +G+ K+ + ++++
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M +G SP+ TY L+ ++GR ++ ++++ E++ + + YN+L+ G
Sbjct: 468 MKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE---AMFNEMLEAGFEPNLF 285
DEA F++M+ + PD T+S T+ C GK E ++F EML G +PN+
Sbjct: 528 VDEAHVRFKEMQ-EKGLNPDVVTYS---TLMECFGKTERVEMAYSLFEEMLVKGCQPNIV 583
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C K+ RT + V ++ + G+TPD
Sbjct: 584 TYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPD 616
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 131/279 (46%), Gaps = 16/279 (5%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCL 128
+TG P Y + + ++ + D K + +S L++ G+
Sbjct: 333 ETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAH 392
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++ +M + VK +Y ++L+++ A + + + ++ + G+ + Y ++ A
Sbjct: 393 RLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSAL 452
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ + ++ +MK+ G + YN L++ VG DEA IFE+++ S+ C+PD
Sbjct: 453 GKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSD-CKPD 511
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+++S+I G V EA F EM E G P++ ++L++C+GK +R + A +
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE---MAYS 568
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKS 347
E+ + GC N++T L++C+EKS
Sbjct: 569 LFEEMLVK------GCQPNIVTYNI------LLDCLEKS 595
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 89 KLKEKSY--DTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
KLK+ S+ D + +K P+ F+ LI +G G D +N++EE++ KP++I
Sbjct: 454 KLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDII 513
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
+YN+L++ +G+ + +KEM + GL+P+ TY++L+ +G+ E S++ EM
Sbjct: 514 SYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
KG Q ++ YN LL G T EA +++ MK + PDS T++ +
Sbjct: 574 LVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMK-QQGLTPDSITYTVL 623
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+ G +++E+MK G P++ TYN L+ + GR + I+
Sbjct: 441 DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIF 500
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+E+ + P+ +Y SL+ G+ ++ ++EM+EKG+ V Y+TL+
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+ A+ +FE+M + CQP+ T++ ++ G+ +EA ++ +M + G P+
Sbjct: 561 ERVEMAYSLFEEM-LVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDSIT 619
Query: 287 LTSL 290
T L
Sbjct: 620 YTVL 623
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 101/217 (46%), Gaps = 10/217 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +++ +I+ G G +D + ++ EM G+ N++ YN L+ + + K +
Sbjct: 267 RRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 165 IYKEMTDNGLSPNWNTYA---SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ M + G PN TY+ +LL A G+ + + + + +G +Y+ L+
Sbjct: 327 VFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQG------IYSYLVR 380
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ +G+ EA +F DM S + + ++ SM+ GK EA M +++ E G
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFP-VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVV 439
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + ++ GK ++ + ++ + G +PD
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPD 476
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STL++ +G + +++EEM G +PN++TYN LLD + ++ R + +Y
Sbjct: 546 DVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLY 605
Query: 167 KEMTDNGLSPNWNTYASLLR----AYGRAR 192
+M GL+P+ TY L R ++G++R
Sbjct: 606 TKMKQQGLTPDSITYTVLERLQSGSHGKSR 635
>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
Length = 796
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 2/220 (0%)
Query: 100 RNEKWRIDPN-AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
R +KW + +FS L+ YG +F V ++KA + YN L+ G+A +
Sbjct: 126 RRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLSDLKADKCPMTTVAYNTLIKVYGKAHK 185
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ YKEM D+ P+ T+ +L+ Y A E L VY EM++ G L Y
Sbjct: 186 LDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEV 245
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
++ VG D A +FE MK +E QP++ +S++I G++ F EM
Sbjct: 246 VVPHAGKVGRLDLACMLFERMK-AEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSL 304
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P L SLI+ Y K+ R + ++ + P+
Sbjct: 305 EIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPN 344
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/452 (19%), Positives = 181/452 (40%), Gaps = 46/452 (10%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + E + + A+S LI +G + +EEM+++ ++P + T+ +L++ ++
Sbjct: 265 RMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIRPLLGTFASLIEAYCKSG 324
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R +K+M PN YA+L+ A+ +A + L Y M+ G+ L ++
Sbjct: 325 RLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWLPPLIFA 384
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G + A ++ +M+ +P +T ++ + GK + E + EM E
Sbjct: 385 VLIEQHAQAGKAETAVRLYREMRGV-GLRPSHFTCRIVVGAVAKGGKYDDVERILFEMQE 443
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN-VMTQTPKEE 336
G V S+++ +R D ++ G TP C +L+ ++ E
Sbjct: 444 MGLNVADAVNDSIVKLVDD-KRISDAWELFLKVTGHGFTPHVSLCREILHGFLSCGDMEH 502
Query: 337 LGKLVECVEKSNSKLG---YVVKL-------LLEEQDIEGDFKKEA-------------- 372
+++ +++ S + Y + L LE +++ F +E
Sbjct: 503 ARQMLSFMQRPGSAVDLRTYCMLLEFFLRGSRLEHEEVVMSFMRETKHPAHSFLCGLMGS 562
Query: 373 -----------------TELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLE 415
+EL + ++ N L++ V + A ++ +
Sbjct: 563 SKHRNGQSLADYIKSFYSELEAEVDFKTRRYLTNVLLNYLVVMGQERKARSFWKVVYQIH 622
Query: 416 VYTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKH 474
+Y + I + W L ++S+S+GAAL + + + + P + I TG K
Sbjct: 623 MYPNSIVLQGDLTWCLKVRSMSIGAALIGVLCTLEKFRERILKRRFVPQRIKILTG-SKA 681
Query: 475 KYSDKGLASVFESHLKELNAPFHDSPDKVGWF 506
+ E+ +K L++PF + +G F
Sbjct: 682 DSDAIAVRQAIEAMMKPLDSPFIFQDEDLGSF 713
>gi|410110101|gb|AFV61130.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
viburnoides]
Length = 337
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 113/218 (51%), Gaps = 7/218 (3%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 120 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 179
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G ++ L+ T++
Sbjct: 180 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMI 239
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G A + ++K +PD+ + I I + G++ EA +F + ++AG
Sbjct: 240 VAYERAGLVAHAKRLLHELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGE 294
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ V +I K ++ +VV +++ LG PD
Sbjct: 295 VKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPD 332
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ + +
Sbjct: 55 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 114
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 115 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 174
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ S +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 175 TLEHEKANNLIQEMQ-SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQI 233
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 234 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 267
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
++ ++++ +K G P+++ YN +++ G+AK + +++ EM G+ PN +Y+
Sbjct: 2 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYS 61
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+LL Y + + LSV+ EM+E L +T N ++ + +G EA ++F M+
Sbjct: 62 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 121
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+P+ ++++++ + EA +F M E N+ S++ YGK +
Sbjct: 122 -GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 180
Query: 303 VVRALNRLPELGITPD 318
+ + GI P+
Sbjct: 181 ANNLIQEMQSRGIEPN 196
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
KW + P+ +F+TLI Y G+ D + M A G +P++ TY+ L++ + + +
Sbjct: 164 KWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLD 223
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ EM DNGL PN T+ +L+ + + + + +Y++M +G+ + YNTL+
Sbjct: 224 EANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLI 283
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G + ++ ++M + +PD +++++I G + A + N+M++
Sbjct: 284 YGLCKKGELKQVHDLIDEMIMN-GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESI 342
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ T+LI C + R D + L + +G+ PD+
Sbjct: 343 RLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDN 381
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 7/215 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FS L+ Y +G + + K ++ T +L+ + + V Y
Sbjct: 65 DFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFY 124
Query: 167 KEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
KE+ + G + + L++ + G R + SV+ + + G++ SV +NTL+
Sbjct: 125 KEVLECGYPASLYFFNILMQRFCKEGEMRLAQ---SVFDAITKWGLRPSVVSFNTLINGY 181
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G DE F + M +S QPD +T+S +I GK+ EA +FNEML+ G PN
Sbjct: 182 IKLGDLDEGFRLKSAMHAS-GAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPN 240
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T+LI + K ++ D + ++ G++PD
Sbjct: 241 GVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPD 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
+ Y+E+ G ++ +N L+ + ++++ +T GL P+ ++ +L+ Y
Sbjct: 122 DFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGY 181
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ ++ + M G Q V Y+ L+ G DEA E+F +M + P+
Sbjct: 182 IKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDN-GLVPN 240
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
TF+++I KV A ++ +ML G P+L +LI K V ++
Sbjct: 241 GVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLID 300
Query: 309 RLPELGITPD 318
+ G+ PD
Sbjct: 301 EMIMNGLKPD 310
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TLI G+ + L + +M ++ + + Y L+ + R R + +
Sbjct: 310 DKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKML 369
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+EM GL P+ TY ++ + + R + + REM+ G
Sbjct: 370 REMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 5/216 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R + +++ LI G D +N++++M+ P + TY ++ + + R +
Sbjct: 36 RRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAIN 95
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ EM + G PN +TY ++ A + E+ + EM EKG+ SV YN L+
Sbjct: 96 LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYC 155
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRGK-VSEAEAMFNEMLEAGFEP 282
G + A EI D+ S +C P+ T++ + IC CR K V A A+ ++MLE+ P
Sbjct: 156 KEGMVEAAQEIL-DLMHSNSCNPNERTYNEL--ICGFCRKKNVHRAMALLSKMLESRLTP 212
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ SLI K D R LN + E G+ PD
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD 248
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 170/416 (40%), Gaps = 23/416 (5%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S I G + ++ +K G+K N + Y L+D +A + ++ M
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
PN +TY +L+ + R ++ L + M +KG++ +V Y L+ G D
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A I + M SS QPD + +++ I RG + EAE M + M E G P+ T +
Sbjct: 372 YAHRILDQMVSS-GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLV 430
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSK 350
I YG + L R+ + G P CL+ KEEL K + V +S
Sbjct: 431 IDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIK---HLLKEELTKKYKNVALCDSI 487
Query: 351 LGYVVKLLLEEQDIEGDFKKE-ATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
+ D+ K E A ELF + + N L + L CK+
Sbjct: 488 PNV---FFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGL------CKVGR 538
Query: 410 LGLTLEVYTDIQSR--SPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGI 467
LG+ +++ + R SP++ +++ L+ L + + +E G P L +
Sbjct: 539 LGVAQKLFDHMNERGVSPSE-AIYNSLLNCCCELGIYGDAVRLVGAMMEHG-HLPLLESL 596
Query: 468 NTGH-GKHKYSDKGLASVFESHLKELNAPFHDSPDKVGWFLTTEAAAKSWLESRSS 522
N G ++ K A V S+L L ++D D+V W + + K+ L S
Sbjct: 597 NVLFCGLYEEGSKEKAKVVFSNL--LQCGYND--DEVAWKILIDGLLKNGLSDGCS 648
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 105/201 (52%), Gaps = 2/201 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++ F++LI+ YG AG F +N+++ MK +G+ P+++T+N+LL + + R
Sbjct: 138 KLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHD 197
Query: 165 IYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM G++P+ T+ +L+ + + + ++++EM+ V YNT++
Sbjct: 198 MFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGL 257
Query: 224 ADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G A + M K + P+ ++++++ + ++ EA +F+EML G +P
Sbjct: 258 CRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKP 317
Query: 283 NLFVLTSLIQCYGKAQRTDDV 303
N +LI+ +A R D++
Sbjct: 318 NAVTYNTLIKGLSEAHRYDEI 338
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 2/191 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+D R D F+TLI + D +++EM+ P+++TYN ++D +
Sbjct: 199 FDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLC 258
Query: 155 RAKRPWQVKTIYKEMTD--NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
RA + + M + PN +Y +LLR Y + ++ L V+ EM +G++ +
Sbjct: 259 RAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPN 318
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
YNTL+ ++ DE + PD+ TF+ +I G + A +F
Sbjct: 319 AVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVF 378
Query: 273 NEMLEAGFEPN 283
EML P+
Sbjct: 379 QEMLNMKLHPD 389
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 40/210 (19%)
Query: 149 LLDTMGRAKRPWQVKTIY--KEMTDNGLSPNWNTYA-SLLRAYGRARYGEDTLSVYREMK 205
+L+ +GRA+ + E NG + Y SL+R+YG A ++++++++ MK
Sbjct: 109 MLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMK 168
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICS---- 260
+ G+ SV +N+LL++ G T A ++F++M+ + PDS+TF+++I+ C
Sbjct: 169 KMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMV 228
Query: 261 -----------------------------CR-GKVSEAEAMFNEMLE--AGFEPNLFVLT 288
CR GKV A + N ML+ PN+ T
Sbjct: 229 DQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYT 288
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L++ Y Q D+ + + + G+ P+
Sbjct: 289 TLLRGYCMKQEIDEALLVFHEMLTRGLKPN 318
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++TL++ Y D L V+ EM G+KPN +TYN L+ + A R ++K
Sbjct: 280 VHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIK 339
Query: 164 T-IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ SP+ T+ L++A+ A + + + V++EM + Y+ L+
Sbjct: 340 GFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRT 399
Query: 223 CADVGYTDEAFEIFEDMKSSE------NCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
D+A +F ++ E C+P + ++ M GK +AE +F +++
Sbjct: 400 LCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLM 459
Query: 277 EAG 279
+ G
Sbjct: 460 KRG 462
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+S T+ + + D +++LI +G G D C+ ++E+MK P++ITYN L++
Sbjct: 76 RSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINC 135
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ +R + EM NGL PN TY++ + A+ + ++ + + +M+ + +
Sbjct: 136 FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 195
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
Y +L+ G EA ++ E++ + + + T+++++ G++ EAE +F
Sbjct: 196 EFTYTSLIDANCKAGNLAEALKLVEEILQA-GIKLNVVTYTALLDGLCEEGRMKEAEEVF 254
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
ML AG PN T+L+ + KA+ + L + E I PD G +L +
Sbjct: 255 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 314
Query: 333 PKEELGKLV 341
+ E KL+
Sbjct: 315 SRLEEAKLL 323
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 12/243 (4%)
Query: 92 EKSYDTRARNEKWRI--DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
E++ + + K+R+ P + + L+ G D +++M A G+K ++ TYN +
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D + + ++++ +M + G +P+ TY SL+ +G+ ++ + ++ +MK+
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 122
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
V YN L+ +AFE +MK++ +P+ T+S+ I G + EA
Sbjct: 123 DPDVITYNALINCFCKFERMPKAFEFLHEMKAN-GLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
F +M PN F TSLI KA + ++ + + + GI LNV+
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK---------LNVV 232
Query: 330 TQT 332
T T
Sbjct: 233 TYT 235
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 24/237 (10%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+ +LI AGN L + EE+ G+K N++TY LLD + R + +
Sbjct: 192 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 251
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
+++ M + G++PN TY +L+ + +A+ E + +EMKEK ++ + LY T+L +
Sbjct: 252 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 311
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWT------------------FSSMITICS--CR 262
C + + I E +S N +T M+ + C+
Sbjct: 312 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCK 371
Query: 263 GKVSE-AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
E A+ +F+EML+ G P+ T+LI K + + +R+ E+G+ D
Sbjct: 372 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELD 428
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 19/183 (10%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+ NA ++TL+ Y +G L + EEM +L+D + + K
Sbjct: 332 INTNAVIYTTLMDAYFKSGQATEALTLLEEML------------DLVDGLCKNNCFEVAK 379
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ EM D G+ P+ Y +L+ G ++G ++ L++ M E GM+L + Y L+
Sbjct: 380 KLFDEMLDKGMMPDKIAYTALID--GNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 437
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ G +A + ++M + PD + +I GKV EA + NEM + G
Sbjct: 438 GLSHSGQVQKARNLLDEM-IGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496
Query: 282 PNL 284
L
Sbjct: 497 TGL 499
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
Query: 104 WRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+++ P+ ++ L+K G D L ++ ++ G P+ I Y L+D + + P
Sbjct: 514 YKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPAT 573
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
I+K M NG+ P+ Y L+ + R E+ L + RE+ + G++ + YNT++
Sbjct: 574 GLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMIC 633
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ +A ++FE +K QP++ TF+ +I G++ +A +F+ MLE G E
Sbjct: 634 GYCSLKIFSKAIKLFEVLKCGRT-QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE 692
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ + LI Y K + T+ ++ ++P+
Sbjct: 693 PNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPN 729
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 46/311 (14%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RA KL+E S + A ++D FS+++ Y G+ + VY M G+ PN++
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY--------GRARYG-- 194
TY+ L++ + R R + ++ ++ GL P+ TY+SL+ + G YG
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441
Query: 195 -------------------------EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
++ L + + ++G+ L+ L+N L+ C + T
Sbjct: 442 LRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRT 501
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ +++ M + PD T++ ++ + +G++ EA A+F ++L+ GF P+ + +
Sbjct: 502 RDGLKMYILMGMYK-VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
LI + K + ++ + GI PD C+ NV+ E CVE
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDI----CIYNVLINMFFRE-----GCVENVLE 611
Query: 350 KLGYVVKLLLE 360
L ++K LE
Sbjct: 612 LLREIIKYGLE 622
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 105/213 (49%), Gaps = 7/213 (3%)
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW 178
G A +F ++ M G PN++T++ L++ + R + ++Y M + G+ P+
Sbjct: 257 GVASDF------FDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL 310
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
Y+ L+ RA E+ S++ +G+++ V ++++++ VG +A E++
Sbjct: 311 VIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTR 370
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
M E P+ T+S +I G+V EA +F ++L+ G EP++ +SLI + K++
Sbjct: 371 ML-KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
D + G PD C L+N +++
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSR 462
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 14/223 (6%)
Query: 125 DGC---------LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLS 175
DGC L +Y M V P+++TY L+ + R + ++ ++ G S
Sbjct: 493 DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552
Query: 176 PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI 235
P+ Y +L+ + + R L +++ M+ G+ + +YN L+ M G + E+
Sbjct: 553 PDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLEL 612
Query: 236 FEDMKSSENCQPDSWTFSSMITICS-CRGKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQC 293
++ +PD T+++M IC C K+ E+L+ G +PN T LI
Sbjct: 613 LREI-IKYGLEPDIVTYNTM--ICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDA 669
Query: 294 YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
Y K R DD + + + E G P+ CL++ +T E
Sbjct: 670 YCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTE 712
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K+ ++P+ ++T+I Y + F + ++E +K +PN IT+ L+D + R
Sbjct: 618 KYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMD 677
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
I+ M + G PN TY+ L+ Y + E +Y +M + ++ Y+ L+
Sbjct: 678 DAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILI 737
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +EA F+ + PD + +I G+++EA +++ ML G
Sbjct: 738 DGLCKKGLMEEASLAFQ-CAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796
Query: 281 EPN 283
P+
Sbjct: 797 MPD 799
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI AG + +++ A GVK +++ +++++D R + +Y
Sbjct: 309 DLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVY 368
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
M G+SPN TY+ L+ R + V+ ++ ++G++ SV Y++L+ C
Sbjct: 369 TRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS 428
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D F ++ M + PD S +I S +G + EA F + ++ G N +
Sbjct: 429 ENLRD-GFGLYGIMLRKGHV-PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNY 486
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +LI + +RT D ++ + + PD
Sbjct: 487 LFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S L+ Y G D ++ + M +GV + + +LD + + R + Y+EM
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL---LAMCADV 226
GL + S L+ R E L+ +R + E+G+ + N + L M +
Sbjct: 202 C-KGLGVYEFVFNSFLK---RGEV-EKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQI 256
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + F DM P+ TFS++I + ++ EA +++N M+E G P+L +
Sbjct: 257 GVASDFF----DMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVI 312
Query: 287 LTSLIQCYGKAQRTDD 302
+ LI +A + ++
Sbjct: 313 YSILINGLFRAGKLEE 328
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++ LI+ + G ++V+ +MK+ G+ PN T N LL + + +
Sbjct: 23 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82
Query: 166 YKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
++EM P ++ LLR + GRA + ++EMK G++ + Y+ LL+
Sbjct: 83 FREMQAGPFLPTSASHNILLRGFFMAGRA------IEFFKEMKASGVEPDLESYHILLSA 136
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+D G EA +F M C PD T++ ++ G+ EA+++ E+L+AG+EP
Sbjct: 137 LSDSGRMAEAHALFSAM----TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEP 192
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N+F + +I CY K + ++ ++ E P+
Sbjct: 193 NVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPN 228
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 4/202 (1%)
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
A+ P+++TYN L+D + + ++ +++ KE+ G PN TY+ ++ Y + E
Sbjct: 152 AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVE 211
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ V+ +M E + +NTL+A G ++A ++F +M+ C+ T++++
Sbjct: 212 EAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI-GCKATIVTYNTL 270
Query: 256 I-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
I ++C RG V A +FN++ AG P + SLIQ G ++R +D +R L + G
Sbjct: 271 IDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ--GFSERANDGLRLLCHMHAEG 328
Query: 315 ITPDDRFCGCLLNVMTQTPKEE 336
PD CL++ + + E
Sbjct: 329 CKPDVITYNCLISGLCSANRVE 350
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 32/213 (15%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP-WQVKT 164
PNA F+TLI + AG + + ++ EM+ IG K ++TYN L+D++ + + +
Sbjct: 227 PNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD 286
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ ++ GL+P TY SL++ G + D L + M +G + V YN L++
Sbjct: 287 LFNKLEGAGLTPTIVTYNSLIQ--GFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLC 344
Query: 225 DVGYTDEAFEIFEDMKSSENC---------------------------QPDSWTFSSMIT 257
++A +F M + N PD TF+++I
Sbjct: 345 SANRVEDAQRLFNGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMTTFNTIIL 404
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
G + +A + +ML+ GF PN + +L
Sbjct: 405 AFCKAGAMHDAREVMKDMLKHGFYPNTYTTYAL 437
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
N +M G++P+ TYN ++ + + I K+ G P+ TY SL+
Sbjct: 279 NYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGV 338
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ + L+++ E KG++ S+ LYNTL+ + G +A ++ DM S E PD
Sbjct: 339 CQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM-SKEGMSPD 397
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
WT++ +I G VS+A + N + G+ P++F +LI Y K + D+ + L+
Sbjct: 398 IWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILD 457
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ G+TPD +LN + + K E
Sbjct: 458 SMWSHGVTPDVITYNSILNGLCKAAKPE 485
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 35/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI Y D + + + M + GV P++ITYN++L+ + +A +P V +
Sbjct: 432 DIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF 491
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K + + G PN TY L+ + +AR + L + E++ +G+ + T+++ +
Sbjct: 492 KMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNN 551
Query: 227 GYTDEAFEIFEDMK-----------------------------------SSENCQPDSWT 251
G DEA+++F M+ + C PDS+T
Sbjct: 552 GDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYT 611
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+ MI G V+ + +E GF P+L +I C R + V ++ +
Sbjct: 612 YRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMV 671
Query: 312 ELGITPD 318
G+ P+
Sbjct: 672 RTGVVPE 678
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 8/217 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+ + ++ YG G ++V+E M +P++ +YN +++ + Q +Y M
Sbjct: 78 VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G++P+ T+ ++++ R + L + M +G +L+ +Y T+++ + Y
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQ 197
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA+E+F M P TF+ ++ I +G + E E + N++L+ G PNLF
Sbjct: 198 VEAYELFNKMLRL-GIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNI 256
Query: 290 LIQCY-------GKAQRTDDVVRALNRLPELGITPDD 319
IQ G + + L+++ G+ PDD
Sbjct: 257 FIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDD 293
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 12/253 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R K++E + D R + + +P+ FS ++ + G F+ VY MK G+ P++
Sbjct: 88 RKGKVQE-AVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDV 146
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
T+ + + R KRP + M G N Y +++ + Y + ++ +
Sbjct: 147 CTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNK 206
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M G+ + +N L+ + G+ E ++ + + C P+ +TF+ I +G
Sbjct: 207 MLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVC-PNLFTFNIFIQGLCRKG 265
Query: 264 -------KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
KV EAE ++M+ G EP+ F ++I Y K + D R L G
Sbjct: 266 VLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFV 325
Query: 317 PDD-RFCGCLLNV 328
PD+ +C ++ V
Sbjct: 326 PDEFTYCSLIIGV 338
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 8/184 (4%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM---TDNGLSPNWNTYASLLRAYGRARYG 194
G K +TY +++ +G ++ + EM DN L Y S +R YGR
Sbjct: 35 GFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEG--VYVSAMRNYGRKGKV 92
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ + V+ M + S+ YN ++ + + GY ++A +++ MK E PD TF+
Sbjct: 93 QEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMK-HEGIAPDVCTFTI 151
Query: 255 MITICSCRGKVSEAEA-MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
I CR K A + N M G E N V ++I + + + N++ L
Sbjct: 152 RIK-SFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRL 210
Query: 314 GITP 317
GI P
Sbjct: 211 GIFP 214
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 9/221 (4%)
Query: 107 DPNAFSTLIKLYGTA-GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D +S L++ Y T G+ V E M GV PN TYN L++ +A + +
Sbjct: 99 DVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDV 158
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M GL+P Y L+ AY R R + MK++G+Q +V ++ TL+ A
Sbjct: 159 LERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAK 218
Query: 226 VGYTDEAFEIF--------EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
G + A + E+ S++C+P+ T+S+++ + + G + AE + M
Sbjct: 219 RGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTA 278
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
AG+ PN+ T+L+ Y +A + L R+ G++P+
Sbjct: 279 AGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPN 319
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 31/266 (11%)
Query: 106 IDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN+++ LI+ Y AG D +V E M+ +G+ P + Y L+D R + +
Sbjct: 132 VAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAE 191
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM----KEKGM-----QLSVT 214
I M G+ N + +L+ AY + E V M +E+G + +V
Sbjct: 192 KILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVH 251
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
Y+TL+ + A G A + M ++ P+ TF++++T S G AE +
Sbjct: 252 TYSTLMNVYARAGLAAGAEGVLTRMTAA-GWAPNVITFTTLMTAYSRAGDPEGAELVLKR 310
Query: 275 MLEAGFEPNLFVLTSLIQCYG------------KAQRT----DDVVRALNRLPELGITPD 318
M AG PN+ +L+ +A+R D + R+ + L PD
Sbjct: 311 MEAAGVSPNVLTYNTLLSATSRMGLREGEVEERRAKRVLQVYDTMRRSAGKGGGLEKAPD 370
Query: 319 DRFCGCLLNVMTQTPK---EELGKLV 341
+ LL + + PK +E+ KL+
Sbjct: 371 EATYTVLLTCLLRFPKRLTKEVYKLI 396
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+KPN ITYN+LL A + + K M GLSP+ T+ +L+ A+ R
Sbjct: 26 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 85
Query: 199 SVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ M+E G+ V Y+ LL G +A E+ E M + + P+S+T++ +I
Sbjct: 86 KMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERM-ARDGVAPNSYTYNYLIE 144
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G++ AE + M G P L+ Y + + + L+R+ + G+
Sbjct: 145 GYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQA 204
Query: 318 DDRFCGCLLN 327
+ + L+N
Sbjct: 205 NVQVFTTLMN 214
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 101 NEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
E + PNA +++L+ Y AG+ G V + M G+ P+ T+N L+ +
Sbjct: 21 GEGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARRE 80
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAY----GRARYGEDTLSVYREMKEKGMQLSVT 214
+ + M ++G+ + TY+ LL+ Y G E+ L M G+ +
Sbjct: 81 VRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLE---RMARDGVAPNSY 137
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
YN L+ G D A ++ E M++ P S + ++ + R AE + +
Sbjct: 138 TYNYLIEGYVKAGEMDWAEDVLERMRTV-GLAPTSMNYCVLMDAYTRRRDARGAEKILDR 196
Query: 275 MLEAGFEPNLFVLTSLIQCYGK 296
M + G + N+ V T+L+ Y K
Sbjct: 197 MKKEGVQANVQVFTTLMNAYAK 218
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT---M 153
TR W + F+TL+ Y AG+ +G V + M+A GV PN++TYN LL M
Sbjct: 274 TRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRM 333
Query: 154 G---------RAKRPWQVKTIYKEMTDNG----LSPNWNTYASLL 185
G RAKR QV + G +P+ TY LL
Sbjct: 334 GLREGEVEERRAKRVLQVYDTMRRSAGKGGGLEKAPDEATYTVLL 378
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
Query: 104 WRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+++ P+ ++ L+K G D L ++ ++ G P+ I Y L+D + + P
Sbjct: 514 YKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPAT 573
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
I+K M NG+ P+ Y L+ + R E+ L + RE+ + G++ + YNT++
Sbjct: 574 GLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMIC 633
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ +A ++FE +K QP++ TF+ +I G++ +A +F+ MLE G E
Sbjct: 634 GYCSLKIFSKAIKLFEVLKCGRT-QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE 692
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+ + LI Y K + T+ ++ ++P+
Sbjct: 693 PNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPN 729
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 46/311 (14%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RA KL+E S + A ++D FS+++ Y G+ + VY M G+ PN++
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY--------GRARYG-- 194
TY+ L++ + R R + ++ ++ GL P+ TY+SL+ + G YG
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441
Query: 195 -------------------------EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
++ L + + ++G+ L+ L+N L+ C + T
Sbjct: 442 LRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRT 501
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ +++ M + PD T++ ++ + +G++ EA A+F ++L+ GF P+ + +
Sbjct: 502 RDGLKMYILMGMYK-VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
LI + K + ++ + GI PD C+ NV+ E CVE
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDI----CIYNVLINMFFRE-----GCVENVLE 611
Query: 350 KLGYVVKLLLE 360
L ++K LE
Sbjct: 612 LLREIIKYGLE 622
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 105/213 (49%), Gaps = 7/213 (3%)
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW 178
G A +F ++ M G PN++T++ L++ + R + ++Y M + G+ P+
Sbjct: 257 GVASDF------FDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL 310
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
Y+ L+ RA E+ S++ +G+++ V ++++++ VG +A E++
Sbjct: 311 VIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTR 370
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
M E P+ T+S +I G+V EA +F ++L+ G EP++ +SLI + K++
Sbjct: 371 ML-KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429
Query: 299 RTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
D + G PD C L+N +++
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSR 462
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 14/223 (6%)
Query: 125 DGC---------LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLS 175
DGC L +Y M V P+++TY L+ + R + ++ ++ G S
Sbjct: 493 DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552
Query: 176 PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEI 235
P+ Y +L+ + + R L +++ M+ G+ + +YN L+ M G + E+
Sbjct: 553 PDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLEL 612
Query: 236 FEDMKSSENCQPDSWTFSSMITICS-CRGKVSEAEAMFNEMLEAG-FEPNLFVLTSLIQC 293
++ +PD T+++M IC C K+ E+L+ G +PN T LI
Sbjct: 613 LREIIKY-GLEPDIVTYNTM--ICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDA 669
Query: 294 YGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
Y K R DD + + + E G P+ CL++ +T E
Sbjct: 670 YCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTE 712
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K+ ++P+ ++T+I Y + F + ++E +K +PN IT+ L+D + R
Sbjct: 618 KYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMD 677
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
I+ M + G PN TY+ L+ Y + E +Y +M + ++ Y+ L+
Sbjct: 678 DAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILI 737
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G +EA F+ + PD + +I G+++EA +++ ML G
Sbjct: 738 DGLCKKGLMEEASLAFQ-CAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796
Query: 281 EPN 283
P+
Sbjct: 797 MPD 799
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI AG + +++ A GVK +++ +++++D R + +Y
Sbjct: 309 DLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVY 368
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
M G+SPN TY+ L+ R + V+ ++ ++G++ SV Y++L+ C
Sbjct: 369 TRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKS 428
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D F ++ M + PD S +I S +G + EA F + ++ G N +
Sbjct: 429 ENLRD-GFGLYGIMLRKGHV-PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNY 486
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +LI + +RT D ++ + + PD
Sbjct: 487 LFNALIDGCFRLKRTRDGLKMYILMGMYKVIPD 519
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+S L+ Y G D ++ + M +GV + + +LD + + R + Y+EM
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM 201
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL---LAMCADV 226
Y + ++ + E L+ +R + E+G+ + N + L M +
Sbjct: 202 CK-----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQI 256
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + F DM P+ TFS++I + ++ EA +++N M+E G P+L +
Sbjct: 257 GVASDFF----DMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVI 312
Query: 287 LTSLIQCYGKAQRTDD 302
+ LI +A + ++
Sbjct: 313 YSILINGLFRAGKLEE 328
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++ L+ G D + +++++ A G P+ +TYN++L + R + + ++
Sbjct: 218 DVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 277
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K+M +G +PN TY+ +L + RA+ +D V EM + G V YN LL
Sbjct: 278 KKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKT 337
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D+A E+F M + C PD ++S ++ KV +A +F+ M+E P++
Sbjct: 338 NLVDKAHELFSTMVDN-GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVT 396
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ KA + D+ L+++ G PD
Sbjct: 397 FNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 39/249 (15%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F ++K + G ++E+M G+ P+ I YN L+D + R + +
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y+EM GL P+ TY SLL A+ + ++ + +++ M EKG + V Y+T+++
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 226 VGYTDEAFE------------------------------------IFEDMKSSENCQPDS 249
G EA E + E+M +S+ PD+
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM-ASKGYVPDN 184
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T++++++ GKVSEA+ F+ M G+ P++ L+ K +TD+ ++
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244
Query: 310 LPELGITPD 318
+ G PD
Sbjct: 245 VIAKGYMPD 253
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 118/249 (47%), Gaps = 3/249 (1%)
Query: 86 RASKLKEKSYDTRARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLN-VYEEMKAIGVKPNM 143
+ +K+KE + EK + D +ST+I G L ++ +M G N
Sbjct: 90 KETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANT 149
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ YN L++ + + + + + +EM G P+ TY ++L R + +
Sbjct: 150 VAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDS 209
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M +G V YN LL G TDEA ++F+D+ ++ PD+ T++S++ + +
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV-IAKGYMPDTVTYNSILLGLARKS 268
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
+ EAE MF +M+ +G PN + ++ + +A++ DD + L + ++G PD
Sbjct: 269 NMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYN 328
Query: 324 CLLNVMTQT 332
LL+ + +T
Sbjct: 329 ILLDGLCKT 337
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 3/226 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ LI N + + EEM + G P+ ITYN +L + R + + K + M
Sbjct: 151 AYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSM 210
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G SP+ Y LL A + ++ + +++++ KG YN++L A
Sbjct: 211 PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 270
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNLFVLT 288
DEA E+F+ M +S C P+ T+S +++ CR KV +A + EM + G P++
Sbjct: 271 DEAEEMFKKMVAS-GCAPNGATYSIVLS-GHCRAKKVDDAHKVLEEMSKIGAVPDVVTYN 328
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
L+ K D + + + G PD +LN + +T K
Sbjct: 329 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN T+ +L + + + ++++M DNG+SP+ Y L+ Y + ++ +
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 201 YREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
Y EM G++ S+ YN+LL A C + EA E+F+ M + + +PD T+S++I+
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETK-MKEAMELFKTM-AEKGFEPDVVTYSTIISGL 123
Query: 260 SCRGKVSEA-EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GKV+EA E +F++M+E G N +LI K + + + L + G PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183
Query: 319 D 319
+
Sbjct: 184 N 184
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 108 PNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + I L G A D V EEM IG P+++TYN LLD + + + +
Sbjct: 287 PNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 346
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M DNG +P+ +Y+ +L + D ++ M E+ + V +N L+
Sbjct: 347 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 406
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA ++ + M S C PD +++++ +G+ +A+ + M E GF + F
Sbjct: 407 AGKLDEAKDLLDQMTCS-GCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 5/181 (2%)
Query: 175 SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFE 234
SPN T+ +L+++ + D ++ +M + G+ YN L+ A G DEA
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
++E+M S +P +T++S++ K+ EA +F M E GFEP++ +++I
Sbjct: 65 LYEEMVSV-GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 295 GKAQRTDDVVRAL-NRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGY 353
K + + + L +++ E G + + L+N + + E + + + +E+ SK GY
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCK--DENIERAYKLLEEMASK-GY 180
Query: 354 V 354
V
Sbjct: 181 V 181
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
C P+ +TF ++ +GK+ + +F +ML+ G P+ LI Y K R D+
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 305 RALNRLPELGITPDDRFCGCLLNVMTQTPK 334
R + +G+ P LLN + K
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETK 93
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 154/326 (47%), Gaps = 21/326 (6%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEM------KAIGVKPNMITYNNLLD 151
R +K PNA + TLIK GN + L +++EM + KP +ITY+ ++D
Sbjct: 186 RMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIID 245
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + R + K +++EM G+ P+ +Y++L+ + A + + ++ EM ++G+Q
Sbjct: 246 GLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQP 305
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ ++ L+ G EA ++ E M P+ T++S+I G ++ A +
Sbjct: 306 DMVTFSVLIDTLCKEGKVTEAKKLLEVM-IQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
F M G EP+ T+LI Y K + + + N + ++G +P+ G LL + Q
Sbjct: 365 FLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQ 424
Query: 332 TPKEELGKLVECVEK-----SNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI-SKDVKK 385
K K + V K +NS++ Y + L + + D EA ELFN + S + K
Sbjct: 425 KGKVGDAKKLFGVMKTYGVSANSQI-YGIFL---DGLCKNDCLFEAMELFNELKSYNFKL 480
Query: 386 AYCN--CLIDLCVNLNLLENACKLLE 409
N CLID LE A +L E
Sbjct: 481 NIENYSCLIDGLCKAGKLETAWELFE 506
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TLI Y +N+Y EM +G PN+ TY LL + + + K ++
Sbjct: 376 DEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLF 435
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+S N Y L + + + ++ E+K +L++ Y+ L+
Sbjct: 436 GVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKA 495
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A+E+FE + S E QPD T++ MI G+V A +F +M E G P++
Sbjct: 496 GKLETAWELFEKL-SQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIA 554
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+L+ + + + ++V++ L+++ + ++P+ C +++++ + E+ K V+ + K
Sbjct: 555 YNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK--DEKYKKFVDLLPK 612
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 12/278 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S +I G D ++EEMKA G+ P++I+Y+ L+ A + Q K ++ EM
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D G+ P+ T++ L+ + + + M ++G+ ++ YN+L+ VG +
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+F M S+ +PD +++++I KV EA ++NEML+ G PN+ +L
Sbjct: 360 SARELFLSM-PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSK 350
++ + + D + + G++ + + G L+ + + L E +E N
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN-----DCLFEAMELFNEL 473
Query: 351 LGYVVKLLLEEQD--IEGDFK----KEATELFNSISKD 382
Y KL +E I+G K + A ELF +S++
Sbjct: 474 KSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE 511
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 136/340 (40%), Gaps = 59/340 (17%)
Query: 39 TSLQKRSVSLQETQSSNPTKHSQNPQYPHG-----KTGSSPKSYIWVNPKSPRASKLKE- 92
+ L S ++ + + H NP P + P S N K+ + ++
Sbjct: 17 SPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSLFLRNCKTGNITAIQAF 76
Query: 93 KSYDTRARNEKWRIDP-NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK----------- 140
+D R+ I P ++F+ L+ ++ ++Y EM+ G+
Sbjct: 77 HFFDLMMRSHP--IPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134
Query: 141 ------------------------PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSP 176
PN++TY L+ + R + ++ M G +P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194
Query: 177 NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL------YNTLLAMCADVGYTD 230
N TY +L++ + L +++EM Q V Y+ ++ VG D
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E+FE+MK ++ PD ++S++I C GK +++ +F+EM++ G +P++ + L
Sbjct: 255 EAKELFEEMK-AQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
I K + + + L + + GI P+ D FC
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFC 353
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 9/217 (4%)
Query: 101 NEKWRI--DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
NE ++ PN + TL+K G ++ MK GV N Y LD + +
Sbjct: 401 NEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN 460
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
++ ++ E+ N Y+ L+ +A E ++ ++ ++G+Q V Y
Sbjct: 461 DCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTY 520
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRG-KVSEAEAMFNE 274
N ++ VG D A +FE M+ + C PD ++++ +C C G K+ E + ++
Sbjct: 521 NIMIHGFCKVGQVDNANILFEKMEEN-GCTPDIIAYNTL--LCGFCEGNKLEEVIKLLHK 577
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
M++ PN T ++ K ++ V L + P
Sbjct: 578 MVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFP 614
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAM 271
++ +N LL A + + + F ++ +M+ + PD +T S ++ C C +VSEA A
Sbjct: 91 ISSFNRLLGGLAKINHYSQLFSLYNEMRLA-GLSPDLFTLS-ILANCLCNVNRVSEALAA 148
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+L G+ PN+ T+LI+ R + R R+ +LG TP+ G L+ + Q
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208
Query: 332 T 332
T
Sbjct: 209 T 209
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ ++++ +S LI AG + ++E++ G++P+++TYN ++ + +
Sbjct: 474 KSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQV 533
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++++M +NG +P+ Y +LL + E+ + + +M +K V+
Sbjct: 534 DNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK----DVSPNAAS 589
Query: 220 LAMCADVGYTDEAFEIFEDM 239
+ D+ DE ++ F D+
Sbjct: 590 CTIVVDMLCKDEKYKKFVDL 609
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 10/252 (3%)
Query: 68 GKTGSSPKSY---IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAG 122
GK G SY I K+ K EK D RN ++P+ + TLI+ + G
Sbjct: 254 GKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRN----LEPDKITYLTLIQACYSEG 309
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
NFD CL++Y+EM+ G++ Y+ ++ + + R + ++++ M G N Y
Sbjct: 310 NFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYT 369
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+L+ AYG+ + ++++ MK +G + Y ++ G DEA E FE K +
Sbjct: 370 ALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDN 429
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
E ++ +SS+I G+V EAE F EM+E G + + +LI K+ + ++
Sbjct: 430 E-VAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEE 488
Query: 303 VVRALNRLPELG 314
+ R+ + G
Sbjct: 489 ALVLFKRMEKEG 500
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 116/236 (49%), Gaps = 6/236 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A ++LI+ +G G + L V+ MK G++P++ T+N LL+ + + + +++ M
Sbjct: 192 AANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVM 251
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ P+ +Y ++++ Y +A + + + +M+++ ++ Y TL+ C G
Sbjct: 252 ECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNF 311
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D ++++M+ + +S +I G+ E ++F M + G + N+ + T+
Sbjct: 312 DSCLHLYQEME-ERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTA 370
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
LI YGK ++ + R+ G PDD G ++N + ++ G+L E VE
Sbjct: 371 LIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKS-----GRLDEAVE 421
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 112/263 (42%), Gaps = 37/263 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY------------------------ 146
++ LI YG GN + +N++E MK G +P+ +TY
Sbjct: 368 YTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCK 427
Query: 147 -----------NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
++L+D +G+A R + + ++EM + G + Y +L+ A ++ E
Sbjct: 428 DNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKME 487
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ L +++ M+++G +V Y L++ +EA +++ D+ + P + +F ++
Sbjct: 488 EALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLW-DLMIDKGITPTTASFRAL 546
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
GKV+ A + +E+ G P +I KA RT+ + + + + G
Sbjct: 547 SVGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIVDRGR 605
Query: 316 TPDDRFCGCLLNVMTQTPKEELG 338
R L+N + + +L
Sbjct: 606 EVPGRVRTILINALRKAGNADLA 628
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 4/139 (2%)
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++LS +L A G D AF F +N + S+I + S
Sbjct: 115 IKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRV 174
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----DRFCGC 324
+F E E GF +F SLI+ +G ++++ R+ E GI P +
Sbjct: 175 RCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNG 234
Query: 325 LLNVMTQTPKEELGKLVEC 343
L+N M E + +++EC
Sbjct: 235 LVNSMFIESAERVFEVMEC 253
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F +++ Y A + +E+M + G+K ++ YN L+D + ++K+ + I+KE
Sbjct: 189 DTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKE 248
Query: 169 MTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M G P+ TY L+ +G + +VY+EM + G++ V Y L++ G
Sbjct: 249 MKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSG 308
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA ++F +M+ S C P + +I ++ EA F E+GF +
Sbjct: 309 KCDEAIKVFHEMEES-GCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTC 367
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
++I Y +A + ++ + + GI P+ R +LN + ++ K E
Sbjct: 368 NAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIE 416
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEM 134
Y W+ ++ ++K+ + K R P+ ++ L++ +G + VY+EM
Sbjct: 226 YNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM 285
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
G+KP+++ Y L+ ++ + + ++ EM ++G P+ + Y L+ G
Sbjct: 286 LDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERL 345
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ L ++ KE G + V N ++ A C + + AF++ ++M+ S P++ T+
Sbjct: 346 DEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEF-HHAFKMVDEMRKS-GIGPNTRTYD 403
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++ K+ EA +F M G EP L T ++ + +R D ++ ++ E
Sbjct: 404 IILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEK 463
Query: 314 GITPDDRFCGCLLN 327
G+ P L+N
Sbjct: 464 GVLPCMHMFSALIN 477
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ + LI G+ D L ++ K G + T N ++ RA +
Sbjct: 329 PHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVD 388
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM +G+ PN TY +L ++ E+ ++++ M+ G + + Y ++ M
Sbjct: 389 EMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNE 448
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A ++++ MK + P FS++I ++ EA F EML+ G P +
Sbjct: 449 RVDMALKVWKQMK-EKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLF 507
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++L + + R RL L TP
Sbjct: 508 SNLKEALVEGGRITLAQEVTQRLEMLRRTP 537
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ F +++ Y A + +E+M + G+K ++ YN L+D + ++K+ + I+KE
Sbjct: 189 DTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKE 248
Query: 169 MTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M G P+ TY L+ +G + +VY+EM + G++ V Y L++ G
Sbjct: 249 MKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSG 308
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
DEA ++F +M+ S C P + +I ++ EA F E+GF +
Sbjct: 309 KCDEAIKVFHEMEES-GCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTC 367
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
++I Y +A + ++ + + GI P+ R +LN + ++ K E
Sbjct: 368 NAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIE 416
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 77 YIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEM 134
Y W+ ++ ++K+ + K R P+ ++ L++ +G + VY+EM
Sbjct: 226 YNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM 285
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
G+KP+++ Y L+ ++ + + ++ EM ++G P+ + Y L+ G
Sbjct: 286 LDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERL 345
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ L ++ KE G + V N ++ A C + + AF++ ++M+ S P++ T+
Sbjct: 346 DEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEF-HHAFKMVDEMRKS-GIGPNTRTYD 403
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++ K+ EA +F M G EP L T ++ + +R D ++ ++ E
Sbjct: 404 IILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEK 463
Query: 314 GITPDDRFCGCLLN 327
G+ P L+N
Sbjct: 464 GVLPCMHMFSALIN 477
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P+ + LI G+ D L ++ K G + T N ++ RA +
Sbjct: 329 PHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVD 388
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM +G+ PN TY +L ++ E+ ++++ M+ G + + Y ++ M
Sbjct: 389 EMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNE 448
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A ++++ MK + P FS++I ++ EA F EML+ G P +
Sbjct: 449 RVDMALKVWKQMK-EKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLF 507
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++L + + R RL L TP
Sbjct: 508 SNLKEALVEGGRITLAQEVTQRLEMLRRTP 537
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 3/233 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
+KL ++D ++ RI P+ F+ LI + + ++++ +MK + PN+ T
Sbjct: 214 AKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYT 273
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+N L+D + + K + M + + P+ TY SL+ Y ++ M
Sbjct: 274 FNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMA 333
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
G+ +V +Y T++ + DEA +FE+M+ + P+ T+SS+I G++
Sbjct: 334 SGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK-IIPNVVTYSSLIDGLCKLGRI 392
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A + +EM + G PN+ +S++ K D + L L + GI PD
Sbjct: 393 FYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T++ + D +N++EEM+ + PN++TY++L+D + + R + + EM
Sbjct: 344 YTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMH 403
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
D G PN TY+S+L A + + + +++ +K++G++ + Y L+ G +
Sbjct: 404 DRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLE 463
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+A +FED+ + D + ++ MI +G +A A+ ++M + G PN
Sbjct: 464 DAQNVFEDL-LVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+ + + + +D ++ TLI G L + + + V+PN + YN ++D M
Sbjct: 153 FHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMC 212
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+AK +Y +M + P+ TY +L+ + + ++ +MK++ + +V
Sbjct: 213 KAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVY 272
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+N L+ G ++A + M ++ +PD T++S++ KV++A+ +F+
Sbjct: 273 TFNILVDGFCKEGKVNDAKVVLAIM-MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDS 331
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M G N+ + T+++ + K + D+ + + I P+
Sbjct: 332 MASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPN 375
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 6/223 (2%)
Query: 90 LKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
L S+ A+ K P A F+TLIK G+ L+ ++++ A G + ++Y
Sbjct: 111 LNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYG 170
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
L++ + + R + K + + PN Y ++ +A+ D +Y +M K
Sbjct: 171 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
+ V YN L++ + V + A ++F MK EN P+ +TF+ ++ GKV++
Sbjct: 231 RICPDVFTYNALISGFSAVSKLNYAIDLFNKMK-KENINPNVYTFNILVDGFCKEGKVND 289
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRAL 307
A+ + M++ +P++ SL+ Y K + D+ ++
Sbjct: 290 AKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSM 332
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ LI + G +++ ++ G P IT+N L+ + Q + ++
Sbjct: 99 FNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVV 158
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G + +Y +L+ + L + + + K +Q + +YN ++ +
Sbjct: 159 AQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVN 218
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+AF+++ M + C PD +T++++I+ S K++ A +FN+M + PN++ L
Sbjct: 219 DAFDLYSQMVAKRIC-PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNIL 277
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + K + +D L + + I PD
Sbjct: 278 VDGFCKEGKVNDAKVVLAIMMKDDIKPD 305
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/178 (18%), Positives = 80/178 (44%), Gaps = 1/178 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P +N +L ++ +AK +++++M NG+ ++ T+ L+ + + + S+
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ ++ +KG + +NTL+ G+ +A F D ++ D ++ ++I
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALH-FHDKVVAQGFHLDQVSYGTLINGLC 177
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+++ A + + +PN + +I KA+ +D +++ I PD
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPD 235
>gi|299471552|emb|CBN80038.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 27/240 (11%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S+ + + G L + +EM A+G+ P++ITY++ +D + ++ + +
Sbjct: 99 DVITYSSAVDACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKEALALL 158
Query: 167 KEMTDNGLSPN------------WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
KEMT GL+PN W TY S + + ++TL++ +EM G+ +V
Sbjct: 159 KEMTAVGLTPNVISYNGLPSMSPWCTYNSAIDGCSKGGQWKETLALLKEMAAVGLTPNVI 218
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE------- 267
YN+ + C+ G EA + ++M ++ PD ++SS I CS +G ++
Sbjct: 219 TYNSAIDACSKGGQWKEALALLKEM-TAVGLTPDVISYSSAIDACS-KGATAQLFPCAKG 276
Query: 268 -----AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
A A+ EM G PN+ ++ I C K + + L ++ +G+TPD C
Sbjct: 277 EQWKGALALLKEMTVVGLTPNVVSYSAAIAC-AKGDQWKVALALLKKMTAVGLTPDVITC 335
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 13/250 (5%)
Query: 82 PKSPRASKLKE--KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGV 139
P+ R ++ ++ D R + + + +I G G ++ + + EM G+
Sbjct: 2 PRDSRGGDRRKALRALDGMKRLPRELLHQKSHCMVITACGRGGQWEQAVKLLREMPTAGL 61
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
PN+ITYN + + ++ + KEMT GL+P+ TY+S + A + + L+
Sbjct: 62 SPNVITYNAVFAACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKGALA 121
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS--------SENCQP--DS 249
+ +EM G+ V Y++ + CA EA + ++M + S N P
Sbjct: 122 LLKEMTAVGLTPDVITYSSAVDACAKGEQWKEALALLKEMTAVGLTPNVISYNGLPSMSP 181
Query: 250 W-TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
W T++S I CS G+ E A+ EM G PN+ S I K + + + L
Sbjct: 182 WCTYNSAIDGCSKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALALLK 241
Query: 309 RLPELGITPD 318
+ +G+TPD
Sbjct: 242 EMTAVGLTPD 251
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 124 FDGC---------LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGL 174
DGC L + +EM A+G+ PN+ITYN+ +D + + + + KEMT GL
Sbjct: 189 IDGCSKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALALLKEMTAVGL 248
Query: 175 SPNWNTYASLLRAYGRARYGE-----------DTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+P+ +Y+S + A + + L++ +EM G+ +V Y+ +A C
Sbjct: 249 TPDVISYSSAIDACSKGATAQLFPCAKGEQWKGALALLKEMTVVGLTPNVVSYSAAIA-C 307
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A A + + M ++ PD T +S I CS G+ A A+ EM G P+
Sbjct: 308 AKGDQWKVALALLKKM-TAVGLTPDVITCNSAIDACSKGGQWETALALLKEMAAVGLTPS 366
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ S I + R + V L + ELG+ PD
Sbjct: 367 VVGYNSAIDACARGGRWKEGVDLLEEMRELGVVPD 401
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 99 ARNEKWR-------------IDPNAFSTLIKLYGTAGN-FDGCLNVYEEMKAIGVKPNMI 144
A+ E+W+ + PN S + G+ + L + ++M A+G+ P++I
Sbjct: 274 AKGEQWKGALALLKEMTVVGLTPNVVSYSAAIACAKGDQWKVALALLKKMTAVGLTPDVI 333
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T N+ +D + + + KEM GL+P+ Y S + A R ++ + + EM
Sbjct: 334 TCNSAIDACSKGGQWETALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVDLLEEM 393
Query: 205 KEKGMQLSVTLYNTLLAMCAD 225
+E G+ V Y+ L+ C +
Sbjct: 394 RELGVVPDVITYHALMVTCVN 414
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 9/221 (4%)
Query: 107 DPNAFSTLIKLYGTA-GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D +S L++ Y T G+ V E M GV PN TYN L++ +A + +
Sbjct: 92 DVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDV 151
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M GL+P Y L+ AY R R + MK++G+Q +V ++ TL+ A
Sbjct: 152 LERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAK 211
Query: 226 VGYTDEAFEIF--------EDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
G + A + E+ S++C+P+ T+S+++ + + G + AE + M
Sbjct: 212 RGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTA 271
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
AG+ PN+ T+L+ Y +A + L R+ G++P+
Sbjct: 272 AGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPN 312
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 31/266 (11%)
Query: 106 IDPNAFST--LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN+++ LI+ Y AG D +V E M+ +G+ P + Y L+D R + +
Sbjct: 125 VAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAE 184
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM----KEKGM-----QLSVT 214
I M G+ N + +L+ AY + E V M +E+G + +V
Sbjct: 185 KILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVH 244
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
Y+TL+ + A G A + M ++ P+ TF++++T S G AE +
Sbjct: 245 TYSTLMNVYARAGLAAGAEGVLTRMTAA-GWAPNVITFTTLMTAYSRAGDPEGAELVLKR 303
Query: 275 MLEAGFEPNLFVLTSLIQCYG------------KAQRT----DDVVRALNRLPELGITPD 318
M AG PN+ +L+ +A+R D + R+ + L PD
Sbjct: 304 MEAAGVSPNVLTYNTLLSATSRMGLREGEVEERRAKRVLQVYDTMRRSAGKGGGLEKAPD 363
Query: 319 DRFCGCLLNVMTQTPK---EELGKLV 341
+ LL + + PK +E+ KL+
Sbjct: 364 EATYTVLLTCLLRFPKRLTKEVYKLI 389
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+KPN ITYN+LL A + + K M GLSP+ T+ +L+ A+ R
Sbjct: 19 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 78
Query: 199 SVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ M+E G+ V Y+ LL G +A E+ E M + + P+S+T++ +I
Sbjct: 79 KMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERM-ARDGVAPNSYTYNYLIE 137
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G++ AE + M G P L+ Y + + + L+R+ + G+
Sbjct: 138 GYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQA 197
Query: 318 DDRFCGCLLN 327
+ + L+N
Sbjct: 198 NVQVFTTLMN 207
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 101 NEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
E + PNA +++L+ Y AG+ G V + M G+ P+ T+N L+ +
Sbjct: 14 GEGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARRE 73
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAY----GRARYGEDTLSVYREMKEKGMQLSVT 214
+ + M ++G+ + TY+ LL+ Y G E+ L M G+ +
Sbjct: 74 VRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLE---RMARDGVAPNSY 130
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
YN L+ G D A ++ E M++ P S + ++ + R AE + +
Sbjct: 131 TYNYLIEGYVKAGEMDWAEDVLERMRTV-GLAPTSMNYCVLMDAYTRRRDARGAEKILDR 189
Query: 275 MLEAGFEPNLFVLTSLIQCYGK 296
M + G + N+ V T+L+ Y K
Sbjct: 190 MKKEGVQANVQVFTTLMNAYAK 211
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT---M 153
TR W + F+TL+ Y AG+ +G V + M+A GV PN++TYN LL M
Sbjct: 267 TRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRM 326
Query: 154 G---------RAKRPWQVKTIYKEMTDNG----LSPNWNTYASLL 185
G RAKR QV + G +P+ TY LL
Sbjct: 327 GLREGEVEERRAKRVLQVYDTMRRSAGKGGGLEKAPDEATYTVLL 371
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 13/269 (4%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+F+ LI + NF+ V EE K G +P++ TYNN +++ K +V + +EM
Sbjct: 317 SFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEM 376
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
NG PN TY LL YG+A L Y MK+ G+ Y++L+ + G
Sbjct: 377 RGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRL 436
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A E+F+DM + D T+++MI+ K A + EM E +P+L
Sbjct: 437 KDACEVFDDM-PKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHP 495
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC------ 343
L++ K +R + L+ + + + PD L+ ++ + GKLVE
Sbjct: 496 LLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNS-----GKLVEACTFFEE 550
Query: 344 -VEKSNSKLGYVVKLLLEEQDIEGDFKKE 371
V K + + VKLL + +I+ K++
Sbjct: 551 MVSKGFTPMETTVKLLTRKLEIKSMLKEK 579
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK+ ++ +P+ F+ I+ Y +F V EEM+ G PN +TY L
Sbjct: 332 EKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTIL 391
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
L G+A + + Y+ M +G+ P+ Y+SL+ G+A +D V+ +M ++G+
Sbjct: 392 LLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGV 451
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
V YNT+++ + A + ++M+ + +C+PD T+ ++ +C + ++ +
Sbjct: 452 VRDVVTYNTMISTACAHSKEETALRLLKEMEET-SCKPDLQTYHPLLKMCCKKKRMKVLK 510
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ + M + P+ T L+Q + + + + G TP
Sbjct: 511 FLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTP 558
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 2/222 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P ++ ++ + G A FD + +EMK I + T + ++ +A+R ++
Sbjct: 211 PEVYNLMVDILGKAKEFDLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEAFR 270
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M G+ + LL A + + E +V E K + LS +N L+ V
Sbjct: 271 GMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKS-SVPLSSPSFNILINGWCKVR 329
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
++A ++ E+ K +PD +T+++ I + + + EM G PN
Sbjct: 330 NFEKARKVMEERK-EHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTY 388
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
T L+ YGKA + + R+ + GI PD F L+ ++
Sbjct: 389 TILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYIL 430
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI YG F C + EEM+ G KPN+I+Y +L++ + + + + + + ++M
Sbjct: 350 YNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMV 409
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN N Y L+ + L + EM + G+ ++ YN+L+ +G
Sbjct: 410 GRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLK 469
Query: 231 EAFEIFEDMKSSENC----------------------------------QPDSWTFSSMI 256
EA E+F + S+ +C +P TF +I
Sbjct: 470 EAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI 529
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN---RLPEL 313
+ CS G + E +FNEML+ P+ V ++I CY Q T V +A + + ++
Sbjct: 530 SGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCY---QETGHVQKAFSLQKEMVDM 585
Query: 314 GITPDDR 320
G+ PD++
Sbjct: 586 GVRPDNK 592
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D +++LI Y AGN CL +YE MK +G+KP + T++ L+ G +K ++K T+
Sbjct: 486 DVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLIS--GCSKEGIKLKETL 543
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ EM LSP+ Y +++ Y + + S+ +EM + G++ YN+L+
Sbjct: 544 FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLK 603
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G E ++ +DMK ++ P++ T+S +I + A + EMLE GF PN+
Sbjct: 604 EGKLSETKDLVDDMK-AKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVC 662
Query: 286 VLTSL 290
+ L
Sbjct: 663 ICNEL 667
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 36/242 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T++ Y G+ D + E+M++ G++PN I +N+++D + + + K+M
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD---- 225
G++P+ TY L+ YGR + EM+E G + +V Y +L+ +C D
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKIL 399
Query: 226 ------------------------------VGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
VG EA F++M S T++S+
Sbjct: 400 EAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM-SKNGIGATIVTYNSL 458
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I GK+ EAE MF + G P++ SLI Y A + + + +LG+
Sbjct: 459 IKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGL 518
Query: 316 TP 317
P
Sbjct: 519 KP 520
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 8/212 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+ N ++ LI T G L ++EM G+ ++TYN+L+ + + + + + ++
Sbjct: 416 NANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+T G P+ TY SL+ Y A + L +Y MK+ G++ ++ ++ L++ C+
Sbjct: 476 FLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKE 535
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + +F +M N PD +++MI G V +A ++ EM++ G P+
Sbjct: 536 GIKLKE-TLFNEMLQM-NLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKT 593
Query: 287 LTSLIQCY---GKAQRTDDVV---RALNRLPE 312
SLI + GK T D+V +A +PE
Sbjct: 594 YNSLILGHLKEGKLSETKDLVDDMKAKGLIPE 625
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+TLI Y AG D + + E MK V+P++IT+N+LL + +A+R + + +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGED-TLSVYREMKEKGMQLSVTLYNTLLAMCA 224
E+ NG P+ TY+ + ++ G L +YRE KG+++ + LL
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G ++A E+ + + P +++++ G + A +M G PN
Sbjct: 254 KEGKVEKAEEVLKSL-VEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNC 312
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
S+I + + Q D + ++ GI P
Sbjct: 313 IAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 8/217 (3%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
FD L++++EM +G +P+ + Y + + +++ M + PN Y
Sbjct: 47 FDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNV 106
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ + + D ++ EM + + + +NTL+ G D A + E MK E
Sbjct: 107 LIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMK-KE 165
Query: 244 NCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+P TF+S+++ +C R ++ EA M NE+ GF P+ F + + G + D
Sbjct: 166 KVEPSIITFNSLLSGLCKAR-RIEEARCMLNEIKCNGFVPDGFTYSIIFD--GLLKSDDG 222
Query: 303 VVRALNRLPEL---GITPDDRFCGCLLNVMTQTPKEE 336
AL+ E G+ D+ C LLN + + K E
Sbjct: 223 AGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVE 259
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G+ + ++E MK V PN+ YN L+ + + KR + ++ EM+ L PN T+
Sbjct: 80 GDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTF 139
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-------------MCADV-- 226
+L+ Y +A + + + MK++ ++ S+ +N+LL+ M ++
Sbjct: 140 NTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKC 199
Query: 227 -GYTDEAFE---IFEDMKSSEN----------------CQPDSWTFSSMITICSCRGKVS 266
G+ + F IF+ + S++ + D++T S ++ GKV
Sbjct: 200 NGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVE 259
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-------- 318
+AE + ++E G P + +++ Y + D + + ++ G+ P+
Sbjct: 260 KAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVI 319
Query: 319 DRFC 322
D+FC
Sbjct: 320 DKFC 323
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 1/169 (0%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
LL +K QV +Y M G P++ ++ + ++ ++ L +++EM G
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+ +Y + +G A E+FE MK + P+ + ++ +I ++ +A
Sbjct: 62 FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK-VVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
E +F EM PN +LI Y KA D + R+ + + P
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEP 169
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
N F+ +I Y F + M P+ +TYN +LD + + R + + +
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMD 268
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M GL PN NTY L+ Y + + ++ +V M + + V YN L+ + G
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+EAF++ ++M++ + PD +++++I C K+SEA + EM E G +PN
Sbjct: 329 IEEAFKLRDEMENLK-LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ Y K + DD + ++ E G +PD
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPD 417
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 86 RASKLKEKSYD--TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R KL+E +Y + AR + ID ++ TLI Y GN D L +++EMK + P+
Sbjct: 465 REKKLEE-AYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPST 523
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TYN ++ + + + Q + E+ ++GL P+ TY ++L Y R E + +
Sbjct: 524 VTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK 583
Query: 204 MKE-----------------------------------KGMQLSVTLYNTLLAMCADVGY 228
M E KG + YNTL+ G
Sbjct: 584 MVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR 643
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
D+AF + +M+ E PD +T++++IT + G++ EAE ++MLE G P
Sbjct: 644 LDDAFNLLSEMEEKE-LGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 10/266 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW--QVKT 164
D ++T++ G ++ +MK+ G+ PN TYN L+ G K W +
Sbjct: 242 DNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV--YGYCKMGWLKEAAN 299
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ + MT N L P+ TY L+ E+ + EM+ + V YNTL+ C
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ EAF++ E+M S + +P++ T + M+ GK+ +A +M E+GF P+
Sbjct: 360 EWSKISEAFKLLEEM-SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVEC 343
+LI Y KA + R ++ + + D +L + + K EE KL+
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLS- 477
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFK 369
S K GY + + I G FK
Sbjct: 478 ---SARKRGYFIDEVSYGTLIVGYFK 500
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 5/224 (2%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PNA + ++K Y G D N +M+ G P+ +TYN L++ +A +
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
EM + + T ++LR R + E+ + +++G + Y TL+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEP 282
G D A +++++MK E P + T++ +I +C C GK +A + NE+LE+G P
Sbjct: 499 FKDGNVDRALKLWDEMKEKE-IIPSTVTYNCIIGGLCQC-GKTEQAISKLNELLESGLLP 556
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+ +++ Y + + + N++ E PD C LL
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI Y AGN +EM +K + +T N +L T+ R K+ + +
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
G + +Y +L+ Y + + L ++ EMKEK + S YN ++
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T++A ++ S PD T+++++ G V +A N+M+E F+P++F
Sbjct: 537 GKTEQAISKLNELLES-GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFT 595
Query: 287 LTSLIQ 292
L++
Sbjct: 596 CNILLR 601
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ LI + G D L ++ +MK G P++ TY L+ + + ++EM
Sbjct: 262 SYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEM 321
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+NG+ PN TY L+ + + ++ + + M EKG+ SV +N L+ G
Sbjct: 322 VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMM 381
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICS-CRGK-VSEAEAMFNEMLEAGFEPNLFVL 287
++A + + MK ++ C P+S T++ + IC CR K + A A+ N+M E PNL
Sbjct: 382 EDAICVLDSMKLNKVC-PNSRTYNEL--ICGFCRKKSMDRAMALLNKMYENKLSPNLVTY 438
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FCG 323
+LI KA+ D R + + + G PD R FC
Sbjct: 439 NTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCA 475
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 1/216 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+ ++ + +++ L + G D ++++M GV+PN+I++N +++ +
Sbjct: 148 HHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVV 207
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
K + + G + TY SL+ Y + D V+ M ++G + Y L+
Sbjct: 208 VAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLI 267
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+VG DEA E+F MK + C PD T++ ++ GK +EA F EM+E G
Sbjct: 268 HGFCEVGKIDEALELFFQMK-EDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGI 326
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
EPN++ T LI + K + D+ + L+ + E G+
Sbjct: 327 EPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLV 362
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 17/298 (5%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN ++ LI + G D + + M G+ +++ +N L+D +
Sbjct: 326 IEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAI 385
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ M N + PN TY L+ + R + + +++ +M E + ++ YNTL+
Sbjct: 386 CVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGL 445
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEP 282
D A+ + M + PD TF + I C C+ GKV +A +F + E E
Sbjct: 446 CKARVVDSAWRLHHLM-IKDGFVPDQRTFCAFID-CLCKMGKVEQAHQVFESLKEKHAEA 503
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLV 341
N F+ T+LI Y KA++ D R+ G P+ LL+ + + K E+ LV
Sbjct: 504 NEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLV 563
Query: 342 ECVEKSNSK-LGYVVKLLLEEQDIEGDFKKEATELFNSISKDVK----------KAYC 388
+ + K ++K + +L+EE E DF + L IS + KAYC
Sbjct: 564 DVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYC 621
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 14/255 (5%)
Query: 97 TRARNEKWRI-----------DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
R + WR+ D F I G + V+E +K + N
Sbjct: 448 ARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFL 507
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y L+D +A++ ++K M G PN T+ LL + ED +S+ M
Sbjct: 508 YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMG 567
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+ + +V Y L+ D A +F D S CQP+ T+++ I +G++
Sbjct: 568 KFDAKPTVHTYTILIEEILRESDFDRA-NMFLDQMISSGCQPNVVTYTAFIKAYCRQGRL 626
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCL 325
EAE M ++ E G + F+ L+ YG + D L R+ + G P + L
Sbjct: 627 LEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSIL 686
Query: 326 LN--VMTQTPKEELG 338
L + + KE +G
Sbjct: 687 LKHLIFEKYNKEGMG 701
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 31/219 (14%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
L+ + + + E +D + L+ YG G D V M G +P+ TY+ L
Sbjct: 627 LEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSIL 686
Query: 150 LDTMGRAK--------------------RPWQVK------TIYKEMTDNGLSPNWNTYAS 183
L + K W++ ++++M + G PN NTY+
Sbjct: 687 LKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSK 746
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L++ + + ++ MKE G+ S ++N+LL+ C +G +EA + + M
Sbjct: 747 LIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYN 806
Query: 244 NCQPDSWTFSSMITICSC--RGKVSEAEAMFNEMLEAGF 280
+ + S + +C +G +AE +F +L G+
Sbjct: 807 HL---AHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGY 842
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ F+ L+ G + +++ + M KP + TY L++ + R +
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+M +G PN TY + ++AY R + + ++KE+G+ L +Y+ L+
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGC 657
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-------------------TICSCRG--- 263
+G D AF + M + C+P T+S ++ T S
Sbjct: 658 IGQLDSAFGVLIRMFDT-GCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANI 716
Query: 264 -KVSEAE---AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
K+++ E +F +M+E G PN+ + LI+ K + R N + E GI+P +
Sbjct: 717 WKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSE 776
Query: 320 RFCGCLL 326
LL
Sbjct: 777 NIHNSLL 783
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
LSVT YN L + + G DE +F+DM ++ +P+ +F++M+ G V A+A
Sbjct: 153 LSVTSYNRLFMVLSRFGLIDELNCLFKDM-LNDGVEPNLISFNTMVNAHCKIGNVVVAKA 211
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
F +++ GF + F TSLI Y K D + +P+ GCL N ++
Sbjct: 212 YFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQE---------GCLRNEVS 262
Query: 331 QTPKE----ELGKLVECVE 345
T E+GK+ E +E
Sbjct: 263 YTNLIHGFCEVGKIDEALE 281
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 123/285 (43%), Gaps = 37/285 (12%)
Query: 86 RASKLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
R +LKE S + K + D ++TL+ Y GNF L ++ EM G+ PN++
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY +L+++M +A + + +M GL PN TY +++ + + ++ V EM
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS----------------------- 241
G S+ YN L+ +G +EA + +DM
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244
Query: 242 -----------SENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
++ PD+ T+SS+I +C R +++EA MF EML P+ F T+
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQR-RLTEACDMFQEMLTIKLPPDEFTYTT 303
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
LI Y K + + + + + G PD L+N + + +
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQAR 348
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T+I Y D M G++PN+IT+N +++ + R R + +
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM+ G P+ TY +L+ Y + L ++ EM G+ +V Y +L+
Sbjct: 76 LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A E F+ M C P+ T++++I + +G + EA + NEM +GF P++
Sbjct: 136 AGNLNRAMEFFDQMHVRGLC-PNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV 194
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI + R ++ + L + G+ PD
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPD 227
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN F+ +I G V EM G P+ +TYN L++ + Q
Sbjct: 49 LEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQAL 108
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM NGLSPN TY SL+ + +A + + +M +G+ + Y T++
Sbjct: 109 VLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGF 168
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A G DEA+ + +M S P T++++I G++ EA + +M+ G P+
Sbjct: 169 AQQGLLDEAYRVLNEMTRS-GFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPD 227
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +++I + + Q D + + + PD
Sbjct: 228 VVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPD 262
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 129/298 (43%), Gaps = 9/298 (3%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L ++EM+ G PN++TYN ++D + KR + + M GL PN T+ ++
Sbjct: 3 LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
R ++T V EM KG YNTL+ G +A + +M + P
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRN-GLSP 121
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T++S+I G ++ A F++M G PN T++I + + D+ R L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 308 NRLPELGITPDDRFCGCLLN--VMTQTPKEELGKLVECVEKSN--SKLGY--VVKLLLEE 361
N + G P L+N + +E +G L + V K + Y ++
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241
Query: 362 QDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD 419
Q+++ F+ + + S+ D Y + + LC L E AC + + LT+++ D
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDA-VTYSSLIQGLCEQRRLTE-ACDMFQEMLTIKLPPD 297
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 53/237 (22%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I + D + EM V P+ +TY++L+ + +R + ++
Sbjct: 227 DVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMF 286
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG------------------ 208
+EM L P+ TY +L+ AY + L ++ EM +KG
Sbjct: 287 QEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQ 346
Query: 209 ----------MQL-------SVTLYNTLLAMCADV---------------GYTDEAFEIF 236
++L S YNTL+ C ++ G DEA ++F
Sbjct: 347 ARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVF 406
Query: 237 EDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
E M ++N +P+ ++ +I CR G V +A ++ EM+ F P+ + +L++
Sbjct: 407 ESM-INKNHKPNEAIYNVIIH-GHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVK 461
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 15/284 (5%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ + P F L++ + + + V +EM G +P+ + LLD + + +
Sbjct: 173 YMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAA 232
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGE--DTLSVYREMKEKGMQLSVTLYNTLLA 221
+++++M +PN + SLL YG R G+ + V ++KE G + + +YN LL
Sbjct: 233 SLFEDMRVR-FNPNLRHFTSLL--YGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLG 289
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A G +AF++ +MK NC P++ +F+ +I K+ EA +F EM +G E
Sbjct: 290 GYAQAGKMRDAFDLLAEMKKV-NCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCE 348
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
++ T+LI + K TD L+ + + G P C++ M KEEL + +
Sbjct: 349 ADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIM--MAHEKKEELEECM 406
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIE-----GDFKKEATELFNSIS 380
E +E+ K+G V L + I GD KEA L+ +
Sbjct: 407 ELIEEMR-KIGCVPDLNIYNTMIRLVCKLGDL-KEAVRLWGEMQ 448
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R +PN F++L+ + G +V ++K G +P+++ YNNLL +A +
Sbjct: 241 RFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDA 300
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM PN ++ L++++ + ++ + ++ EM+ G + V Y TL++
Sbjct: 301 FDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISG 360
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G TD+A+EI +DM + P ++ ++ + ++ E + EM + G P
Sbjct: 361 FCKWGNTDKAYEILDDMIQKGH-DPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVP 419
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+L + ++I+ K + VR + G+ P
Sbjct: 420 DLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNP 454
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 151/347 (43%), Gaps = 58/347 (16%)
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG---LS 175
G AGN V+ K G + + Y ++ T+G+ ++ V + +EM L+
Sbjct: 118 GDAGNLGYRFFVWAS-KQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLT 176
Query: 176 PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFE 234
P + L+R + R + + V EM + G + ++ LL A+C + G EA
Sbjct: 177 PE--VFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN-GSVKEAAS 233
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+FEDM+ N P+ F+S++ GK+ EA+ + ++ EAGFEP++ V +L+ Y
Sbjct: 234 LFEDMRVRFN--PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGY 291
Query: 295 GKAQRTDDVVRALNRLPELGITPD--------DRFC------------------GCLLNV 328
+A + D L + ++ P+ FC GC +V
Sbjct: 292 AQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 351
Query: 329 MTQT-----------PKEELGKLVECVEKSN--SKLGYVVKLLLEEQDIEGDFKKEATEL 375
+T T + L + ++K + S+L Y+ ++ E KKE E
Sbjct: 352 VTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE-------KKEELEE 404
Query: 376 FNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQS 422
+ ++++K C+ DL + ++ CKL +L + ++ ++Q+
Sbjct: 405 CMELIEEMRKI--GCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQA 449
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 79/191 (41%), Gaps = 38/191 (19%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+A K+++ ++D A +K PNA F+ LI+ + D + ++ EM+ G + ++
Sbjct: 293 QAGKMRD-AFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 351
Query: 144 ITYNNLL-----------------DTMGRAKRPWQVK------------------TIYKE 168
+TY L+ D + + P Q+ + +E
Sbjct: 352 VTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEE 411
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G P+ N Y +++R + ++ + ++ EM+ G+ + Y ++ G
Sbjct: 412 MRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGC 471
Query: 229 TDEAFEIFEDM 239
EA + F++M
Sbjct: 472 LVEACDYFKEM 482
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
V++E++ + V P+ ++N L+ +A+ + + KEM ++G SP+ TY SL+ AY
Sbjct: 251 GVFQELRGV-VPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAY 309
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ + ++ EM KG + +V Y ++ G T EA ++F+ +K + C PD
Sbjct: 310 CMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVK-RDGCVPD 368
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+ ++S+I I G++ +A ++F+EM G P + + ++I + ++ ++ L
Sbjct: 369 ASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILV 428
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDF 368
++ E PD + T TP +L C ++ K+ + + +DI DF
Sbjct: 429 KMEEQSCKPD---------IKTYTPLLKL-----CCKRQWMKILPFLICHMFRKDISPDF 474
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 102/206 (49%), Gaps = 3/206 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
+++ ++ DT E+ P+ +++LI+ Y +F + EM + G +PN+IT
Sbjct: 277 ARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVIT 336
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y ++ +G+A R + ++ ++ +G P+ + Y S++ GRA ED SV+ EM
Sbjct: 337 YTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMC 396
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
G+ +V ++NT+++ D + A +I M+ ++C+PD T++ ++ +C R +
Sbjct: 397 RTGIPPTVAIFNTMISAACDHSQAENALKILVKME-EQSCKPDIKTYTPLLKLCCKRQWM 455
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLI 291
+ M P+ L+
Sbjct: 456 KILPFLICHMFRKDISPDFSTYILLV 481
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++F+TL+ + A + + +EM+ G P++ITY +L++ K V I
Sbjct: 263 DESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAIL 322
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G PN TY ++ A G+A ++ L V+ ++K G + YN+++ +
Sbjct: 323 NEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRA 382
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A +F++M P F++MI+ + A + +M E +P++
Sbjct: 383 GRLEDANSVFDEM-CRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKT 441
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T L++ K Q + + + I+PD
Sbjct: 442 YTPLLKLCCKRQWMKILPFLICHMFRKDISPD 473
>gi|440804730|gb|ELR25603.1| pentatricopeptide repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 642
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 105/214 (49%), Gaps = 2/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++ P+A S ++ L ++ + + E M G PN+ + LL +G+A++P
Sbjct: 101 QLHPSAVSAVLPLLARTRQWETAVELVELMPRHGHTPNLFVISGLLKVLGQARQPDNAHY 160
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ E+ GL+P+ + +++L+ A G A ++ + M + G+ ++ ++ L+
Sbjct: 161 L-AEIERRGLTPDSHCFSALITALGGAGRADEAERYFARMTQLGLAPNLHCFSALINALG 219
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G D+A F+ M PD+ FS++I G+V+EAE F +M + G P+L
Sbjct: 220 NAGRVDDAERCFDAMDQL-GVVPDAHCFSTLIAALGTAGRVAEAERHFAKMEKLGVVPDL 278
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++L+ KA + D +++ G+ PD
Sbjct: 279 HCFSTLMSALTKAGKVDAAQHVFHQIASRGLKPD 312
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 13/242 (5%)
Query: 99 ARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
AR + + PN FS LI G AG D ++ M +GV P+ ++ L+ +G A
Sbjct: 197 ARMTQLGLAPNLHCFSALINALGNAGRVDDAERCFDAMDQLGVVPDAHCFSTLIAALGTA 256
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R + + + +M G+ P+ + +++L+ A +A + V+ ++ +G++ + +
Sbjct: 257 GRVAEAERHFAKMEKLGVVPDLHCFSTLMSALTKAGKVDAAQHVFHQIASRGLKPDLVCF 316
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
N L++ AD G DEA F + ++ +PD ++S++I + A A+ EM
Sbjct: 317 NALISGFADAGRADEAEHWFAKITTTGRLKPDRISYSALIQANEVVARPDRALALLQEMT 376
Query: 277 E--------AGFEPNLFVLTSLIQCYGKAQ---RTDDVVRALNRLPELGITPDDRFCGCL 325
+ N+ T++I C KA+ D N + + G+ P+ G L
Sbjct: 377 HKVLTLCLLLVCDQNVVSYTTVISCLAKARGRHHMDQAQEVFNEMVKQGVRPNATTFGAL 436
Query: 326 LN 327
++
Sbjct: 437 IH 438
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 7/244 (2%)
Query: 108 PNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F S L+K+ G A D + E++ G+ P+ ++ L+ +G A R + +
Sbjct: 137 PNLFVISGLLKVLGQARQPDNA-HYLAEIERRGLTPDSHCFSALITALGGAGRADEAERY 195
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ MT GL+PN + +++L+ A G A +D + M + G+ ++TL+A
Sbjct: 196 FARMTQLGLAPNLHCFSALINALGNAGRVDDAERCFDAMDQLGVVPDAHCFSTLIAALGT 255
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA F M+ PD FS++++ + GKV A+ +F+++ G +P+L
Sbjct: 256 AGRVAEAERHFAKMEKL-GVVPDLHCFSTLMSALTKAGKVDAAQHVFHQIASRGLKPDLV 314
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL---NVMTQTPKEELGKLVE 342
+LI + A R D+ ++ G DR L N + P L L E
Sbjct: 315 CFNALISGFADAGRADEAEHWFAKITTTGRLKPDRISYSALIQANEVVARPDRALALLQE 374
Query: 343 CVEK 346
K
Sbjct: 375 MTHK 378
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 18/224 (8%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM- 169
S L K G + D V+ EM GV+PN T+ L+ ++ K+M
Sbjct: 399 ISCLAKARGR-HHMDQAQEVFNEMVKQGVRPNATTFGALIHGHALMGDLETARSRLKQMS 457
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE-------MKEKGMQLSVTLYNTLLAM 222
T+ L+P + L+ A R D + Y + MK++G++ ++ ++
Sbjct: 458 TEFNLAPAAEIHNILMDA--EKRVATDPVEAYHQVLRAVDHMKQEGVRPDHATFSIVIDA 515
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE----A 278
G EA F M S P++ F+S+I + G++ +AEA+ + + +
Sbjct: 516 AGFAGLPHEAEHQFHAMTSLHGLHPNANNFTSLIEALARNGQLDKAEAVLDSLAARQATS 575
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALN---RLPELGITPDD 319
E + S G D R ++ + G+ PDD
Sbjct: 576 ALEHDRLTAKSFNTLLGFCIGAGDAARGQRVAAKMHQAGVEPDD 619
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 76 SYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK 135
S+IW S + K+ EK YD + R D F+ LI+ YG A ++ ++V E MK
Sbjct: 275 SFIWAYGNSGQIEKM-EKWYD-EFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMK 332
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
P ++T+N +++ GR +++ + +M G+ PN TY SL+ AY +A Y +
Sbjct: 333 KRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLK 392
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
S+ R+++ + L +N +L+ G + E+F MK C+PD+ TF++M
Sbjct: 393 KVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMK-ERKCKPDNITFATM 451
Query: 256 ITICSCRGKVSEAEAMFNEML 276
I + +G + A+ + M+
Sbjct: 452 IQAYNAQGMIEAAQNLEVNMI 472
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 3/246 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LIK T G FD ++ EM +G++ + +TYN ++D G+A +++
Sbjct: 198 DVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSL 257
Query: 167 KEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM ++G P+ T S + AYG + E Y E + G++ + +N L+
Sbjct: 258 TEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGK 317
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++ + E MK P TF+ +I + G + + E F +M G +PN
Sbjct: 318 ACMYEKMVSVMEFMKK-RFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSI 376
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
SL+ Y KA V L ++ +T D F C+L+ Q E +G+L +
Sbjct: 377 TYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVM 436
Query: 345 EKSNSK 350
++ K
Sbjct: 437 KERKCK 442
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P TY LL +G+ K+P Q +++ M GL P + Y +L+ AYG +
Sbjct: 125 EPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHS-------- 176
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
G D+AF EDMKS +C+PD +T+S +I C
Sbjct: 177 ---------------------------GQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCC 209
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ G+ E +F EM G E + ++I YGKA + + +L + E G D
Sbjct: 210 TTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPD 269
Query: 320 RF 321
F
Sbjct: 270 IF 271
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 7/232 (3%)
Query: 106 IDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPW 160
+ P+ F+ I + G G +V ++M+ G+ P+++TYN L+D GRA + +
Sbjct: 184 VSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMY 243
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
V + KEM G+SPN T+ L+ Y + + V+ EM++ G+ ++ Y +L+
Sbjct: 244 HVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLV 303
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G +++ ++ E+M+ E T +S++ +G + EAE + M + G
Sbjct: 304 SGLCREGKVEDSMKLVEEME--ELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGM 361
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+PN+ +LI Y + + + A + GI+PD + CL+ T +
Sbjct: 362 KPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTS 413
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 11/247 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RA K+ + N+ I PN F+ LI Y N + V+EEM+ G+ NM
Sbjct: 238 RAGKMYHVDMLLKEMNQAG-ISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANM 296
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TY +L+ + R + + +EM + GL+ T S+L + + +
Sbjct: 297 VTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDG 355
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M +KGM+ +V YNTL+ +G EA M + + PD T++ +IT +
Sbjct: 356 MAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAM-AGKGISPDVKTYNCLITGFTTST 414
Query: 264 KVSEAEAMFNEMLEAGFEPNLF---VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
+ +EM E G + +L VL + C G+ ++ V+ L+ + E+G+ P R
Sbjct: 415 DWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKA---VKLLDEMVEVGLEPKHR 471
Query: 321 FCGCLLN 327
++N
Sbjct: 472 TYNAIIN 478
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLY---GTAGNFDGCLNVYEEMKAIGVKPNMITY 146
K+ D W + P+ ++TLI Y G AG + +EM G+ PN++T+
Sbjct: 205 RKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTF 264
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L++ + +++EM +G+ N TY SL+ R ED++ + EM+E
Sbjct: 265 NVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEE 324
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ TL + L C G EA E + D + + +P+ T++++I GK+
Sbjct: 325 LGLATLPTLNSVLNGFCKK-GMMVEA-EGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMK 382
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EA A M G P++ LI + + V L+ + E G+ D
Sbjct: 383 EATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKAD 434
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 1/187 (0%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
+ M G+KPN++TYN L+D R + + M G+SP+ TY L+ + +
Sbjct: 354 DGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTS 413
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
+ EMKE G++ + YN L+ G +A ++ ++M +P T
Sbjct: 414 TDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEM-VEVGLEPKHRT 472
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I +G A + M + N+ ++ + K + D+ LN +
Sbjct: 473 YNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEML 532
Query: 312 ELGITPD 318
E G+ P+
Sbjct: 533 EKGLVPN 539
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 2/232 (0%)
Query: 89 KLKEKSYDTRARNEKWRI-DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
K+ E + +EK + D ++ LI Y GN +++EM + G++P +TY
Sbjct: 346 KMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYT 405
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
+L+ + + R Q +++++ G+ P+ + +L+ + + ++ +EM +
Sbjct: 406 SLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQM 465
Query: 208 GMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE 267
+ +NTL+ G + A E+ E+MK S +PD +++++I+ S RG + +
Sbjct: 466 KVVPDEVTFNTLMQGRCREGKVEAARELIEEMK-SRGIKPDHISYNTLISGYSKRGDMKD 524
Query: 268 AEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
A + +EML GF P L +LIQ K + D + L + GITP+D
Sbjct: 525 AFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPND 576
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 6/252 (2%)
Query: 71 GSSPKSYIWVNPKSP--RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDG 126
G P SY + + S + KL+E S + ++ + P A ++TLI Y GN +
Sbjct: 256 GVKPDSYTYGSFISGMCKEGKLEEAS-GMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEM 314
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ ++M G+ P + TYN L+ + + + I KEM++ GL P+ TY L+
Sbjct: 315 AFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILIN 374
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
Y R + +++ EM KG+Q + Y +L+ + + G +A ++FE + +
Sbjct: 375 GYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKI-VRKGIF 433
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD F+++I G + A AM EM + P+ +L+Q + + +
Sbjct: 434 PDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAREL 493
Query: 307 LNRLPELGITPD 318
+ + GI PD
Sbjct: 494 IEEMKSRGIKPD 505
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 3/228 (1%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK++ A + RI + F+ +I + G M+A+G+KPN++TYN +
Sbjct: 173 EKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTI 232
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ R + I+ M G+ P+ TY S + + E+ + +MKE G+
Sbjct: 233 IHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGL 292
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ + YNTL+ + G + AF+ + D E P T++ +I K+ EA+
Sbjct: 293 RPTAVTYNTLIDGYCNKGNLEMAFD-YRDKMVREGLMPTVSTYNMLIHALFLDCKMDEAD 351
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ EM E G P+ LI Y + + + GI P
Sbjct: 352 GIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQP 399
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TLI Y G+ V +EM +IG P ++TYN L+ + + + + +
Sbjct: 505 DHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLL 564
Query: 167 KEMTDNGLSPNWNTYASLLRAYG 189
KEM G++PN NTY SL+ G
Sbjct: 565 KEMISKGITPNDNTYLSLIEGIG 587
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+Y EM + +K +++T+N +++ + + + + K M G+ PN TY +++ Y
Sbjct: 178 LYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYC 237
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCADVGYTDEAFEIFEDMKSSENCQPD 248
E ++ MK +G++ Y + ++ MC + G +EA + E MK +P
Sbjct: 238 SRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKE-GKLEEASGMLEKMKEI-GLRPT 295
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+ T++++I +G + A ++M+ G P + LI + D+ +
Sbjct: 296 AVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIK 355
Query: 309 RLPELGITPDDRFCGCLLN 327
+ E G+ PD L+N
Sbjct: 356 EMSEKGLVPDSVTYNILIN 374
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 1/159 (0%)
Query: 178 WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFE 237
+ Y L+RA + G+D + MK KG+ V N +L++ T++A+ ++
Sbjct: 121 YVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYA 180
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
+M + TF+ MI + GK+ +A+ M G +PN+ ++I Y
Sbjct: 181 EM-FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239
Query: 298 QRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
R + + + G+ PD G ++ M + K E
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLE 278
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL---DTMGRAKRPWQVK 163
D F+TL++ G + + EEMK+ G+KP+ I+YN L+ G K ++V+
Sbjct: 470 DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVR 529
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
EM G +P TY +L++ + G+ + +EM KG+ + Y +L+
Sbjct: 530 ---DEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Query: 224 ADV 226
+V
Sbjct: 587 GNV 589
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 3/262 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ LI+ AG + EM+ +G++P+ YN LL+ + + +M
Sbjct: 88 AYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQM 147
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
D+G++ N TY LL AY RA ED+ V EMK +G++L Y+TL+ + D G
Sbjct: 148 ADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMW 207
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A ++ +M+ + D ++ +I G++++A +F++M G +P++ S
Sbjct: 208 KKATDLIMEMQEL-GVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNS 266
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI+ + + T +R + E G+ PD + +++ + + K +E+ KL +
Sbjct: 267 LIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRG 326
Query: 349 SK-LGYVVKLLLEEQDIEGDFK 369
K G V +L++ G F+
Sbjct: 327 LKESGAVYAVLVDIYGQYGHFR 348
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 123/279 (44%), Gaps = 35/279 (12%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDT-RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
++Y+ + RA +L++ + + R+D +STL++LY G + ++ E
Sbjct: 157 RTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIME 216
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ +GV+ ++ YN L+DT G+ + + ++ +M G+ P+ T+ SL+R + R
Sbjct: 217 MQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGN 276
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS------------ 241
+ L + M+E+GM ++ T+++ + G DE ++F M++
Sbjct: 277 TKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAV 336
Query: 242 ----------------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+EN Q F + + +G + + M G
Sbjct: 337 LVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEG 396
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EPNL +L LI +G A R + + L + + G++PD
Sbjct: 397 IEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPD 435
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ E ++ P+ F L Y G + +NV + M+A G++PN++ N L++ G A R
Sbjct: 358 KAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRH 417
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+ + + + D+G+SP+ TY +L++A+ RA+
Sbjct: 418 LEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAK 450
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
Query: 74 PKSYIWVNPKSPRASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYE 132
PK ++ + + K E K RN + ++ L+ +YG G+F +
Sbjct: 296 PKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVA 355
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+KA ++ + + L + + Q + + M G+ PN L+ A+G A
Sbjct: 356 ALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAG 415
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ L+V + +K+ GM V Y TL+
Sbjct: 416 RHLEALAVLQHIKDSGMSPDVVTYTTLM 443
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
+G+ PN+ YN L+D + + +R ++KEM GL PN TYA L+ A + ED
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
L ++ +M++KG++++V YN+L+ G D A + M E P + ++S +I
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM-VKEGLTPTAASYSPLI 450
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G +S A + EM E G N + T+LI + K ++ D+ R +++ + +
Sbjct: 451 AGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510
Query: 317 PDDRFCGCLLNVMTQ 331
P++ NVM +
Sbjct: 511 PNE----VTFNVMIE 521
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 105/236 (44%), Gaps = 3/236 (1%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R +L E+++ + + PN F+ LI FD +++EM G++PN
Sbjct: 314 RKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNE 373
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TY L+ + + ++ +M D G+ Y SL+ Y + + +
Sbjct: 374 VTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M ++G+ + Y+ L+A G A E+ +M + +++TF+++I
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREM-AERGIAWNNYTFTALINGFCKDK 492
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
K+ EA +F++M+++ PN +I+ Y + +++ E+G+ PD+
Sbjct: 493 KMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 104/223 (46%), Gaps = 3/223 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++S LI G+ + ++ EM G+ N T+ L++ + K+ + ++ +M
Sbjct: 445 SYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-MCADVGY 228
D+ + PN T+ ++ Y +Y +M E G++ Y +L++ +C G
Sbjct: 505 IDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV 564
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ +A E D+++S ++++ ++++ G+ +E +++EM G + +L T
Sbjct: 565 S-KANEFVADLENSYAVL-NNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFT 622
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++ K + + E G+ PDD F C+++ +++
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSK 665
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 38/249 (15%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+D ++ I+ Y + N DG + M++ GVK + + YN L+ + + R +
Sbjct: 195 HLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE 254
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGR--------------ARYG---------------- 194
+ M + G++ + TY +L+ + R R G
Sbjct: 255 VKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELR 314
Query: 195 -----EDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPD 248
E+ S+ ++ + GM +V YN L+ +C + + D+A +F++M + +P+
Sbjct: 315 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF-DDADRLFKEM-AGRGLEPN 372
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T++ +I RG + +A +F++M + G + ++ SLI Y K D L+
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432
Query: 309 RLPELGITP 317
+ + G+TP
Sbjct: 433 GMVKEGLTP 441
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 91 KEKSYDTRARNEKWRIDPNA------FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
K+K D AR ID N F+ +I+ Y GN +Y++M +G+KP+
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE--DTLSVYR 202
TY +L+ + + ++ ++ N + +LL YG R G +T ++
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALL--YGLFREGRFTETYHLWD 607
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
EM +G++L + + ++ +++ +F +MK + +PD ++ MI S
Sbjct: 608 EMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMK-EQGVKPDDIFYTCMIDALSKE 666
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
+ +A +++M+ G+ PN T LI
Sbjct: 667 ENMIQALNCWDQMVIDGYSPNTVTHTVLI 695
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 2/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I N LN +++M G PN +T+ L++ + ++ + +
Sbjct: 652 DDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLC 711
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + PN TY L + E ++ M + G S+ +N L+
Sbjct: 712 KEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKA 770
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++ + S PD ++S++I G +++A ++NEML G +P++
Sbjct: 771 GKIQEAIDLMRKITES-GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA 829
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
I+ +D + + G+ P+
Sbjct: 830 YNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 2/189 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++ EMK GVKP+ I Y ++D + + + Q + +M +G SPN T+ L+
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLC 699
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++ Y + +EM + + YN L A G ++A ++ M S
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 759
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
F+ +I GK+ EA + ++ E+GF P+ +++I K + N
Sbjct: 760 --FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNE 817
Query: 310 LPELGITPD 318
+ G+ PD
Sbjct: 818 MLYKGLKPD 826
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+ + + T G+ + +++ M G +++++N L+ + +A + + +
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDL 779
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+++T++G SP+ +Y++++ + ++ EM KG++ V YN + C
Sbjct: 780 MRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
G +D+A I+ +M S QP+ T+ ++++
Sbjct: 840 HGESDKALGIYTNMIRS-GVQPNWDTYRALLS 870
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/182 (18%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G+ N T + +L ++ + ++ + ++ +M +G+ + Y + +RAY +R +
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217
Query: 198 LSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ M+ +G++ S YN L+ +C ++ EA E+ +++ + D T+ +++
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNM-RVQEAVEV-KNVMVNIGVTADEVTYRTLV 275
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
++ A + ++M+ GF P+ + +I K + ++ +L +LG+
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMV 335
Query: 317 PD 318
P+
Sbjct: 336 PN 337
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
S + R+R +++ F++L++ + AG F + V+ MK+ GV P+++T+N+LL +
Sbjct: 136 SIEKRSRG-IVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTIL 194
Query: 154 GRAKRPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ R K +Y EM G++P+ T+ L+R + +D ++ ++ G +
Sbjct: 195 LKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPD 254
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
V YNTL+ G A+ + + M K S + P+ T++++I + ++ +A A+
Sbjct: 255 VVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAV 314
Query: 272 FNEMLEAG------------------------------------FEPNLFVLTSLIQCYG 295
F EM+ G F P+ +L+ C+
Sbjct: 315 FEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHC 374
Query: 296 KAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LGKLVE 342
A DD ++ R+ EL I PD L+ + Q E L KL+E
Sbjct: 375 HAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLE 426
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
+ + +K YD D F+ LI+ + G D ++ ++ G +P+++TYN
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
L+D + RA + + K M L+PN TY +L+R Y R E L+V+ EM
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMV 319
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GK 264
+G++ + YNTL+ + ++ +I E PD+ TF++++ C C G
Sbjct: 320 NQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMH-CHCHAGN 378
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRAL 307
+ +A +F M E +P+ ++L++ G ++ +D++ L
Sbjct: 379 LDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKL 424
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY--KEM 169
+T+++ G + L + + +G +Y ++L+ +GR + + E
Sbjct: 80 TTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 170 TDNGLSP-NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
G+ + SL+R + RA ++++ V+ MK G+ SV +N+LL + G
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGR 199
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
T+ A +++++M S+ PD++TF+ +I G V + +FN++ G EP++
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259
Query: 289 SLIQCY---GKAQRTDDVVRALNR 309
+L+ GK +VV+ + +
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGK 283
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 92/232 (39%), Gaps = 49/232 (21%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN ++TLI+ Y + L V+EEM G+K N ITYN L+ + A++ ++K
Sbjct: 288 LNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIK 347
Query: 164 TI------------------------------------YKEMTDNGLSPNWNTYASLLRA 187
I ++ M++ + P+ TY++L+R+
Sbjct: 348 DILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRS 407
Query: 188 YGRARYGEDTLSVYREMKEKGMQLS-------VTLYNTLLAMCADVGYTDEAFEIFEDMK 240
+ + E + ++ E+ + LS V YN + + G T +A + F +
Sbjct: 408 LCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLM 467
Query: 241 SSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
P S+ + + C+ G + ML F P+ SLI
Sbjct: 468 RRGTQDPPSY---KTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLI 516
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ L+K Y G+ ++ EM+ G P+ TY+ L+D A R + + KEM
Sbjct: 399 AYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEM 458
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+G+ PN ++ +L +Y + + V REM+ G+ YN ++
Sbjct: 459 EASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCL 518
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A F+ M+ E QPD+ T++++I C C+ G ++AE +F M E+G P
Sbjct: 519 DHALATFDRMR-MEGVQPDAVTWNTLID-CHCKSGHHNKAEELFEAMQESGCSPCTTTYN 576
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+I +G+ +R +DV L ++ G+ L NV+T T
Sbjct: 577 IMINSFGEQERWEDVKTLLGKMQSQGL---------LANVVTYT 611
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK-TI 165
D + +S LI Y AG ++ V +EM+A GV+PN ++ +L + R + WQ +
Sbjct: 431 DEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASY-RDRGKWQKSFQV 489
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM ++G+SP+ + Y ++ +G+ + L+ + M+ +G+Q +NTL+
Sbjct: 490 LREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCK 549
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT----------ICSCRGKVS--------- 266
G+ ++A E+FE M+ S C P + T++ MI + + GK+
Sbjct: 550 SGHHNKAEELFEAMQES-GCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVV 608
Query: 267 ---------EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+A F M G +P++ VL SLI +G+ +R + L + E + P
Sbjct: 609 TYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKP 668
Query: 318 DDRFCGCLLNVMTQTPK 334
D L+ + + K
Sbjct: 669 DVVTYTTLMKALIRVEK 685
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 11/226 (4%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
+I G AG + ++EE+K G+ P YN LL + ++I EM +G
Sbjct: 368 VITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG 427
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
SP+ +TY+ L+ AY A E V +EM+ G++ + +++ +LA D G ++F
Sbjct: 428 FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSF 487
Query: 234 EIFEDMKSSENCQPDSWTFSSMITI---CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
++ +M++S PD ++ MI C+C + A A F+ M G +P+ +L
Sbjct: 488 QVLREMRNS-GVSPDRHFYNVMIDTFGKCNC---LDHALATFDRMRMEGVQPDAVTWNTL 543
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
I C+ K+ + + E G +P C N+M + E+
Sbjct: 544 IDCHCKSGHHNKAEELFEAMQESGCSP----CTTTYNIMINSFGEQ 585
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 121/254 (47%), Gaps = 11/254 (4%)
Query: 70 TGSSPKSYIWVNPKSPRASKLK-EKSYDT--RARNEKWRIDPNAFSTLIKLYGTAGNFDG 126
+G P SY++ + + K +KS+ RN D + ++ +I +G D
Sbjct: 461 SGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDH 520
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
L ++ M+ GV+P+ +T+N L+D ++ + + +++ M ++G SP TY ++
Sbjct: 521 ALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMIN 580
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
++G ED ++ +M+ +G+ +V Y TL G +++A F M+ ++ +
Sbjct: 581 SFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL-------GLSEQAINAFRVMR-ADGLK 632
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P +S+I + +EA ++ M E +P++ T+L++ + ++ D V
Sbjct: 633 PSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAV 692
Query: 307 LNRLPELGITPDDR 320
+ G TPD +
Sbjct: 693 YEEMTLSGCTPDRK 706
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 11/269 (4%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL--SVY 201
+TYN L+ R + + M +G ++ Y+ ++++ R + ++ +Y
Sbjct: 256 LTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 315
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
E++ ++L L N ++ A G + A F M P + T ++IT
Sbjct: 316 AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMS-FLAMVQGNGLSPKTATLVAVITALGN 374
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ EAEA+F E+ E G P +L++ Y K D ++ + G +PD+
Sbjct: 375 AGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHT 434
Query: 322 CGCLLNVMTQTPKEELGKLV-ECVEKSNSKL-GYVVKLLLEEQDIEGDFKKE---ATELF 376
L++ + E ++V + +E S + YV +L G ++K E+
Sbjct: 435 YSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMR 494
Query: 377 NS-ISKDVKKAYCNCLIDLCVNLNLLENA 404
NS +S D + + N +ID N L++A
Sbjct: 495 NSGVSPD--RHFYNVMIDTFGKCNCLDHA 521
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++LI +G +V + MK +KP+++TY L+ + R ++ +V +Y+EM
Sbjct: 637 VLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEM 696
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTL 198
T +G +P+ A L A RY E TL
Sbjct: 697 TLSGCTPDRKARAMLRSAL---RYMERTL 722
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++ D ++ LI G D L + EM G P+M Y++L+ + +A+R
Sbjct: 76 YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHAS 135
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ EM G P+ + L+ +A +D +++M + G Q +V +YN LL
Sbjct: 136 SLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGL 195
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEP 282
G ++A +F +MK S +C PD T+++++ +C R +V E +F M AG+ P
Sbjct: 196 CSSGQLEQANTLFAEMK-SHSCSPDVVTYNTLLDAVCKAR-RVEEGCKLFEAMRAAGYVP 253
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N+ ++LI + + + + E G P+
Sbjct: 254 NVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPN 289
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 10/226 (4%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNM 143
+A K+K+ S + + K PN + L+G ++G + ++ EMK+ P++
Sbjct: 162 QAGKVKDAS-ERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDV 220
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+TYN LLD + +A+R + +++ M G PN T+++L+ R E L V+
Sbjct: 221 VTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGS 280
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC-QPDSWTFSSMITICSCR 262
M E G + + Y TL++ +A E+FE M ++ C PD+ ++S+I R
Sbjct: 281 MLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKM--TQACIPPDAVAYNSLIAGYCKR 338
Query: 263 GKVSEAEAMFNEML-EAGFEPNLFVLTSLIQCY---GKAQRTDDVV 304
G + EAE ++ EM AG +P + +LI + GK R +++V
Sbjct: 339 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELV 384
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 18/296 (6%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S++IK + V EEM A G P++ +N ++ R+ + + +Y+ M
Sbjct: 13 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72
Query: 171 DNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
++G P+ +Y L+ +G A+ G +++L + EM +G S+ Y++L+ A
Sbjct: 73 ESGYKPDNVSYHILI--HGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARR 130
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A +F++M + PD F +I GKV +A F +M + G +PN+ V
Sbjct: 131 VDHASSLFDEMIRGGH-HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYN 189
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG-KLVECVEKS 347
L+ + + + + +PD LL+ + + + E G KL E + +
Sbjct: 190 VLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAA 249
Query: 348 NSKLGYVVKLLLEEQDIEGDFK----KEATELFNSI----SKDVKKAYCNCLIDLC 395
GYV ++ I G + ++A E+F S+ K K Y + LC
Sbjct: 250 ----GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLC 301
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ + N+ TY++++ ++ + +P + + +EM G +P+ + +++ + R+
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
E VY+ M E G + Y+ L+ A +G DE+ +I +M P +S
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQ-TPSMQAYS 119
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
S++ + +V A ++F+EM+ G P+ + LI +A + D ++P+
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179
Query: 314 GITPD 318
G P+
Sbjct: 180 GCQPN 184
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+GC ++E M+A G PN+IT++ L+ + R + ++ M + G PN TY +L
Sbjct: 238 EGC-KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 296
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ RA ++ +M + + YN+L+A G DEA +++ +M
Sbjct: 297 ISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG 356
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
QP TF+++I GK+ A + EM G + LI +A + D+ +
Sbjct: 357 LQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEAL 416
Query: 305 RALNRLPELGITPDDRFCGCLLNVMTQT 332
++ E D C + + +T
Sbjct: 417 EVYKQMREKKFLLDPVSCVSFVGGLCKT 444
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKA-IGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
D A+++LI Y G+ D +Y EM G++P ++T+N L+D + + + +
Sbjct: 324 DAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANEL 383
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM GL+ + TY L+ RA ++ L VY++M+EK L + +
Sbjct: 384 VAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 443
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
G D+A+ +FE + S P+ TF + G+V +A+ +
Sbjct: 444 TGNIDQAYAVFEATRKS-GAVPNPETFRILSESLIKLGRVEDAQKLM 489
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN FSTLI G + L V+ M G KPN TY L+ + RA++ Q + +
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-KGMQLSVTLYNTLL---- 220
+++MT + P+ Y SL+ Y + ++ +YREM G+Q ++ +NTL+
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 372
Query: 221 ---------AMCADVGYT----------------------DEAFEIFEDMKSSENCQPDS 249
+ A++G DEA E+++ M+ +
Sbjct: 373 KLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 432
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
S + +C G + +A A+F ++G PN L + K R +D
Sbjct: 433 SCVSFVGGLCK-TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 484
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI Y + G L + EM G +++TYN LL+ + R K ++
Sbjct: 398 DTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF 457
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
KEM + G+ P++ T +L+ Y + LS++ M + ++ V YNTL+ V
Sbjct: 458 KEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKV 517
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A E++ DM S E P +FS +I G VSEA +++EM E G +P L
Sbjct: 518 GEMEKAKELWYDMISRE-IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 576
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I+ Y +A LN + G+ PD
Sbjct: 577 CNTIIKGYLRAGNLSKANDFLNTMISEGVPPD 608
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 1/221 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +TLI Y GN L+++E M +KP+++TYN L+D + + K ++
Sbjct: 468 DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 527
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + P++ +++ L+ + + ++ EMKEKG++ ++ NT++
Sbjct: 528 YDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA 587
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A + M SE PD T++++I A + N M E G PNL
Sbjct: 588 GNLSKANDFLNTM-ISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVT 646
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+++ + + R + L+++ + GI PD L+N
Sbjct: 647 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 4/244 (1%)
Query: 86 RASKLKEKSYDTRA-RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A KL+E S + R + + NA + L+ G D VYE+ G N+
Sbjct: 166 QARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVY 225
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T N +++ + + + V EM + G+ + TY +L+ AY R + + M
Sbjct: 226 TLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM 285
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
KG++ + YN L+ G + A + ++M C P++ TF+ M+ + SCR +
Sbjct: 286 AGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLC-PNAATFNPML-VESCRKE 343
Query: 265 -VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCG 323
V EAE +FNEML+ G P+L +S++ + + + ++ +G+ PD
Sbjct: 344 DVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYT 403
Query: 324 CLLN 327
L+N
Sbjct: 404 ILIN 407
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI G+++ V +EM +G+ PN T+N +L R + W+ + ++ EM
Sbjct: 297 YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEML 356
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ P+ +++S++ + R L+ + +MK G+ +Y L+
Sbjct: 357 QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVS 416
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTS 289
A ++ +M C D T+++++ CRGK + +A+ +F EM+E G P+ + LT+
Sbjct: 417 GALKMRNEM-VERGCVMDVVTYNTLLN-GLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474
Query: 290 LIQCYGK 296
LI Y K
Sbjct: 475 LIHGYCK 481
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVK 140
K K KE YD +R I P+ +FS LI + + G +++EMK G+K
Sbjct: 516 KVGEMEKAKELWYDMISR----EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIK 571
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P ++T N ++ RA + M G+ P+ TY +L+ ++ + + +
Sbjct: 572 PTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFL 631
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
M+E+G+ ++ YN +L + G EA + M + PD T++S+I
Sbjct: 632 INNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKM-IDKGINPDKSTYTSLINGYV 690
Query: 261 CRGKVSEAEAMFNEMLEAGFEPN 283
+ + EA + +EML+ GF P+
Sbjct: 691 SKDNMKEAFRVHDEMLQRGFVPD 713
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+ EM GV P++I++++++ R + +++M GL P+ Y L+ Y
Sbjct: 351 VFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYC 410
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
R L + EM E+G + V YNTLL D+A E+F++M PD
Sbjct: 411 RNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM-VERGVFPDF 469
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
+T +++I G +++A ++F M +P++ +L+ + K
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKV 517
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
+ L+R Y +AR + ++ ++++G +S+ N LL VG+ D A++++ED
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 240 KSSEN--------------CQ--------------------PDSWTFSSMITICSCRGKV 265
S N C+ D T+++++ RG V
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SEA + + M G +P LF +LI K + R L+ + +G+ P+
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPN 328
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 13/277 (4%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
+E + ARNE +ST+I + +G D L V+E M A V+PN++ Y+ ++
Sbjct: 247 EEMERNGLARNE------FVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMI 300
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ + + + +++EM D+ +PN TY S+++ Y + LSV+ EM G
Sbjct: 301 GGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCM 360
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+ Y+ L+ +VG +A +++ M C PD+ ++SMI G V
Sbjct: 361 PNAVSYSILINGLCNVGRLKDAMMVWKHML-DRGCAPDTIAYTSMIKGLCVSGMVDGGLR 419
Query: 271 MFNEMLEAGF-EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL--- 326
+F +ML +G +P++ L+ A+ + LNR+ + G PD C L
Sbjct: 420 LFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREF 479
Query: 327 NVMTQTPKEELGKLVE--CVEKSNSKLGYVVKLLLEE 361
+ +E L LV C + N G V+ ++L +
Sbjct: 480 GAGERKGREFLEGLVVRLCDRRRNMAAGEVLMVMLAK 516
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ AF+ +++ AG+ G ++E M+ G P TYN L+ + R +
Sbjct: 151 VAAEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGV 210
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ P TY +++ R +D V EM+ G+ + +Y+T++
Sbjct: 211 MRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCK 270
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A +++E M +S +P+ +S+MI + GK++EAE +F EM+++ PN+
Sbjct: 271 SGEIDCALKVWEAMVASP-VRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNII 329
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+IQ Y K T + + G P+
Sbjct: 330 TYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPN 362
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 7/211 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQVKTIYK 167
++ L+ G + V M+ GV P ++TY ++D + GR K W+V +
Sbjct: 191 YNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVA---E 247
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM NGL+ N Y++++ + ++ + L V+ M ++ +V LY+ ++ A+ G
Sbjct: 248 EMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFG 307
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
EA +F +M S+ C P+ T+ SMI G S A +++ EM+ AG PN
Sbjct: 308 KMTEAELLFREMIDSK-CAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSY 366
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI R D + + + G PD
Sbjct: 367 SILINGLCNVGRLKDAMMVWKHMLDRGCAPD 397
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 94 SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
S + R+R +++ F++L++ + AG F + V+ MK+ GV P+++T+N+LL +
Sbjct: 136 SIEKRSRG-IVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTIL 194
Query: 154 GRAKRPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ R K +Y EM G++P+ T+ L+R + +D ++ ++ G +
Sbjct: 195 LKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPD 254
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
V YNTL+ G A+ + + M K S + P+ T++++I + ++ +A A+
Sbjct: 255 VVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAV 314
Query: 272 FNEMLEAG------------------------------------FEPNLFVLTSLIQCYG 295
F EM+ G F P+ +L+ C+
Sbjct: 315 FEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHC 374
Query: 296 KAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LGKLVE 342
A DD ++ R+ EL I PD L+ + Q E L KL+E
Sbjct: 375 HAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLE 426
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
+ + +K YD D F+ LI+ + G D ++ ++ G +P+++TYN
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
L+D + RA + + K M L+PN TY +L+R Y R E L+V+ EM
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMV 319
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GK 264
+G++ + YNTL+ + ++ +I E PD+ TF++++ C C G
Sbjct: 320 NQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMH-CHCHAGN 378
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRAL 307
+ +A +F M E +P+ ++L++ G ++ +D++ L
Sbjct: 379 LDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKL 424
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 92/232 (39%), Gaps = 49/232 (21%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++PN ++TLI+ Y + L V+EEM G+K N ITYN L+ + A++ ++K
Sbjct: 288 LNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIK 347
Query: 164 TI------------------------------------YKEMTDNGLSPNWNTYASLLRA 187
I ++ M++ + P+ TY++L+R+
Sbjct: 348 DILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRS 407
Query: 188 YGRARYGEDTLSVYREMKEKGMQLS-------VTLYNTLLAMCADVGYTDEAFEIFEDMK 240
+ + E + ++ E+ + LS V YN + + G T +A + F +
Sbjct: 408 LCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLM 467
Query: 241 SSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
P S+ + + C+ G + ML F P+ SLI
Sbjct: 468 RRGTQDPPSY---KTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLI 516
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 58/129 (44%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
DP ++ TLI + G F+ + M P+ TY +L++ + +P
Sbjct: 473 DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSL 532
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + PN +T+ S+L ++ S+ + M +K ++ +++ + +
Sbjct: 533 EKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGA 592
Query: 227 GYTDEAFEI 235
G D+AF++
Sbjct: 593 GMNDKAFQL 601
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 139/283 (49%), Gaps = 14/283 (4%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPWQV 162
+D A + L+ G+ V++EM +G+ PN +TY L+ T G+ ++ +
Sbjct: 36 LDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGF-- 93
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+++EM G+ PN TY L+ + R E S++ EM +G+ +V YNTL+A
Sbjct: 94 -ALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAG 152
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G +A ++ DM +E +P TF+ ++ GK+S A FN+M AGF+P
Sbjct: 153 LCRHGKLWDAAKLL-DMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQP 211
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
+ LI + +A+ RAL+ + E G+ P L++ + + +GK E
Sbjct: 212 SAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR--ENHMGKAFE 269
Query: 343 CV---EKSNSKL-GYVVKLLLEEQDIEGDFKKEATELFNSISK 381
+ EK+ ++ + +L+ +EG+ K+A +LF S+ +
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNM-KDARKLFQSMGE 311
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++TLI G + + M+ G +P++IT+N L+D G+A + + +M
Sbjct: 145 SYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM 204
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G P+ TY L+ + RAR +MKE+G++ + Y L+ A +
Sbjct: 205 KAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHM 264
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+AFEI M+ + + D+ T+ ++ G + +A +F M E G EP+ +
Sbjct: 265 GKAFEILAGMEKA-GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+I YG+ + ++ + + + G+ P+ G + V+ + K
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDK 368
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 17/236 (7%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R E R F+ L+ YG AG L + +MKA G +P+ +TYN L+ RA+
Sbjct: 170 RTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDM 229
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +M + GL P TY L+ ++ R + + M++ G+++ Y L
Sbjct: 230 TRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVL 289
Query: 220 L-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+ A+C + G +A ++F+ M + +P + + MI G +A + EM +
Sbjct: 290 VRALCME-GNMKDARKLFQSM-GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347
Query: 279 GFEPN-------LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
G PN + VL +C DD+VRA G+ + C LL+
Sbjct: 348 GLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRA-------GLQTSESICQALLD 396
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 121/258 (46%), Gaps = 38/258 (14%)
Query: 98 RARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
R E R P+ +F+T+I + G N++ EM GV P++ TYN+++D + +
Sbjct: 220 RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCK 279
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
A+ + + + ++M D G+ P+ TY +++ Y + + +++ ++R+M KG+
Sbjct: 280 ARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVT 339
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS---------------------- 253
+++ ++ G + +A EIF+ M +++ PD ++S
Sbjct: 340 FSSFMSSLCKHGRSKDAEEIFQYM-TTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSM 398
Query: 254 ---SMITICSC----------RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+++ C C RG + EA +F EM G PN+ ++LI + + R
Sbjct: 399 ADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRL 458
Query: 301 DDVVRALNRLPELGITPD 318
D + +++ +GI P+
Sbjct: 459 ADAMEKFSQMISIGIEPN 476
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 3/203 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK++ I+P+ + TL+ Y +G D L ++ EM VKP +TYN +
Sbjct: 565 EKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIV 624
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
LD + RA R K ++ EM D+G + + +TY LL+ R ++ ++++ ++
Sbjct: 625 LDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC 684
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ +T+ NT++ V +EA ++F + S+ P+ T+ MI G V EA+
Sbjct: 685 KFDITILNTMINALYKVRRREEANDLFAAI-STSGLVPNVSTYGVMIRNLLKEGSVEEAD 743
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQ 292
MF+ M ++G P+ +L +I+
Sbjct: 744 TMFSSMEKSGCAPSSRLLNDIIR 766
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S L+ Y T G F N++ M G+ N N L+ + + ++
Sbjct: 371 DIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVF 430
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ PN TY++L+ A+ R D + + +M G++ + +Y++L+
Sbjct: 431 TEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMH 490
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E +M S +P+ FSS+I G+V +A+ +FN ++ G P +
Sbjct: 491 GDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVT 550
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SLI Y + + L+ + +GI PD
Sbjct: 551 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 124/266 (46%), Gaps = 11/266 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN FS++I G +V+ + IG +P ++T+N+L+D + + +
Sbjct: 511 PNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 570
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M G+ P+ T +L+ Y ++ +D L ++REM K ++ + YN +L
Sbjct: 571 LDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLR 630
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS-EAEAMFNEMLEAGFEPNL 284
G T A ++F +M S D T+ ++ CR ++ EA +F+++ + ++
Sbjct: 631 AGRTSAAKKMFHEMIDS-GTAVDIDTYKILLK-GLCRNDLTDEAITLFHKLGAMDCKFDI 688
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVEC 343
+L ++I K +R ++ + G+ P+ G ++ N++ + EE +
Sbjct: 689 TILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSS 748
Query: 344 VEKSNSK-----LGYVVKLLLEEQDI 364
+EKS L ++++LL++ DI
Sbjct: 749 MEKSGCAPSSRLLNDIIRMLLQKGDI 774
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 51/249 (20%)
Query: 121 AGNF--DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA-------KRPWQVKTIYKEMTD 171
AG F D ++++E+ G + + N+ L + RA P V ++ +
Sbjct: 53 AGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICR 112
Query: 172 NGLSP-----NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
P TY L+ RAR + + + G++ T L
Sbjct: 113 EEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHA 172
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICS--------------------C---- 261
TDEA ++ S +C PD+ +++++I ++C C
Sbjct: 173 KRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDV 232
Query: 262 ------------RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+G+VS+A +FNEM++ G P++ S++ KA+ D L +
Sbjct: 233 VSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQ 292
Query: 310 LPELGITPD 318
+ + G+ PD
Sbjct: 293 MVDKGVEPD 301
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/117 (18%), Positives = 58/117 (49%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + + L+K D + ++ ++ A+ K ++ N +++ + + +R + +
Sbjct: 651 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDL 710
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ ++ +GL PN +TY ++R + E+ +++ M++ G S L N ++ M
Sbjct: 711 FAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 767
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ D +TLIK G L ++++ A G + + ++Y L++ + +A V
Sbjct: 159 YHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVA 218
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +++ + + P+ Y +++ + + D +Y EM KG+ +V YNTL+
Sbjct: 219 RLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGF 278
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G EAF + +MK +N PD +TF+ +I GK+ EA ++F EM PN
Sbjct: 279 CIMGNLKEAFSLLNEMK-LKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPN 337
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ TSLI K + + ++ E GI PD
Sbjct: 338 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 372
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+ + + +++D ++ TLI AG + +++ VKP+++ Y ++ +
Sbjct: 185 FHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLC 244
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+ KR +Y EM G+SPN TY +L+ + ++ S+ EMK K + V
Sbjct: 245 KNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVY 304
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+N L+ G DEA +FE+MK +N P+ T++S+I + A A+ +
Sbjct: 305 TFNILIDALGKEGKIDEAISLFEEMK-HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKK 363
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
M E G +P+++ T L+ K R ++ + L
Sbjct: 364 MKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHL 399
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P+ F+ LI G G D ++++EEMK + PN++TY +L+D + + +
Sbjct: 299 INPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAI 358
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ K+M + G+ P+ +Y LL A + E+ ++ + KG L+V YN ++
Sbjct: 359 ALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGL 418
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G + ++ M+ + C PD+ TF ++I + + +AE EM+ G
Sbjct: 419 CKAGLFGDVMDLKSKME-GKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 77/178 (43%), Gaps = 1/178 (0%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P ++N+L ++ + K V +++K+ NG++PN T L+ + + SV
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+ + ++G NTL+ G A F D ++ Q D ++ ++I
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRAL-YFHDKVVAQGFQLDQVSYGTLINGLC 209
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ + ++ +P++ + T++I C K +R D + + GI+P+
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPN 267
>gi|356565780|ref|XP_003551115.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 622
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ L+ + GN + V ++MK G+KP+ TYN L+ G A +P + +
Sbjct: 199 DSRFFNALVNAFAEFGNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESIKLL 258
Query: 167 KEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M+ G + PN T L+RA + + + +V +M GMQ V +NT+ A
Sbjct: 259 DLMSIEGNVKPNLKTCNMLIRALCKMEHTSEAWNVVYKMTTSGMQPDVVSFNTVAISYAQ 318
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G T + + +M+ + +P+ T + +I+ GKV EA + + G +PNL
Sbjct: 319 NGKTVQVEAMILEMRRN-GLKPNDRTCTIIISGYCREGKVREALRFVYRIKDLGLQPNLI 377
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+L SL+ + D V LN + E I PD ++N +Q G L +C E
Sbjct: 378 ILNSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITYSTIMNAWSQA-----GFLEKCKE 432
Query: 346 KSNSKLGYVVK 356
N+ L VK
Sbjct: 433 IYNNMLKSGVK 443
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 2/223 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TL+ T F ++ ++ +KP+ +N L++ K + ++M
Sbjct: 168 YTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSRFFNALVNAFAEFGNIEDAKKVVQKMK 227
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG-MQLSVTLYNTLLAMCADVGYT 229
++GL P+ TY +L++ YG A ++++ + M +G ++ ++ N L+ + +T
Sbjct: 228 ESGLKPSACTYNTLIKGYGIAGKPDESIKLLDLMSIEGNVKPNLKTCNMLIRALCKMEHT 287
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA+ + M +S QPD +F+++ + GK + EAM EM G +PN T
Sbjct: 288 SEAWNVVYKMTTS-GMQPDVVSFNTVAISYAQNGKTVQVEAMILEMRRNGLKPNDRTCTI 346
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
+I Y + + + +R + R+ +LG+ P+ L+N T
Sbjct: 347 IISGYCREGKVREALRFVYRIKDLGLQPNLIILNSLVNGFVDT 389
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
NV +M G++P+++++N + + + + QV+ + EM NGL PN T ++ Y
Sbjct: 292 NVVYKMTTSGMQPDVVSFNTVAISYAQNGKTVQVEAMILEMRRNGLKPNDRTCTIIISGY 351
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
R + L +K+ G+Q ++ + N+L+ D D E+ M+ +PD
Sbjct: 352 CREGKVREALRFVYRIKDLGLQPNLIILNSLVNGFVDTMDRDGVNEVLNLMEEFY-IRPD 410
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
T+S+++ S G + + + ++N ML++G +P+ + L + Y +AQ + L
Sbjct: 411 VITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDGHAYSILAKGYVRAQEMEKAEELLT 470
Query: 309 RLPELGITPD 318
+ + G+ P+
Sbjct: 471 VMTKSGVQPN 480
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 93/197 (47%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++ + G +P++ TY LL+ + K + +I + + + P+ + +L+ A+
Sbjct: 152 IFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSRFFNALVNAFA 211
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
ED V ++MKE G++ S YNTL+ G DE+ ++ + M N +P+
Sbjct: 212 EFGNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESIKLLDLMSIEGNVKPNL 271
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T + +I SEA + +M +G +P++ ++ Y + +T V +
Sbjct: 272 KTCNMLIRALCKMEHTSEAWNVVYKMTTSGMQPDVVSFNTVAISYAQNGKTVQVEAMILE 331
Query: 310 LPELGITPDDRFCGCLL 326
+ G+ P+DR C ++
Sbjct: 332 MRRNGLKPNDRTCTIII 348
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++L+ + + DG V M+ ++P++ITY+ +++ +A + K
Sbjct: 372 LQPNLIILNSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITYSTIMNAWSQAGFLEKCK 431
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
IY M +G+ P+ + Y+ L + Y RA+ E + M + G+Q +V ++ T+++
Sbjct: 432 EIYNNMLKSGVKPDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVIFTTVMSGW 491
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
VG D A +F+ M P+ TF ++I + + +AE M M E +P
Sbjct: 492 CSVGRMDNAMRVFDKM-GEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQP 549
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+++ + ++ +P + I++ + + G P+ TY +LL A +Y + S+ ++EK
Sbjct: 136 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQ 195
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
M+ +N L+ A+ G ++A ++ + MK S +P + T++++I GK E+
Sbjct: 196 MKPDSRFFNALVNAFAEFGNIEDAKKVVQKMKES-GLKPSACTYNTLIKGYGIAGKPDES 254
Query: 269 EAMFNEM-LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + M +E +PNL LI+ K + T + + ++ G+ PD
Sbjct: 255 IKLLDLMSIEGNVKPNLKTCNMLIRALCKMEHTSEAWNVVYKMTTSGMQPD 305
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 112 STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL----DTMGRAKRPWQVKTIYK 167
+ +I Y G L +K +G++PN+I N+L+ DTM R V +
Sbjct: 345 TIIISGYCREGKVREALRFVYRIKDLGLQPNLIILNSLVNGFVDTMDRDG----VNEVLN 400
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M + + P+ TY++++ A+ +A + E +Y M + G++ Y+ L
Sbjct: 401 LMEEFYIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDGHAYSILAKGYVRAQ 460
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
++A E+ M S QP+ F+++++ G++ A +F++M E G PNL
Sbjct: 461 EMEKAEELLTVMTKS-GVQPNVVIFTTVMSGWCSVGRMDNAMRVFDKMGEFGVSPNLKTF 519
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+LI Y +A++ L + E + P
Sbjct: 520 ETLIWGYAEAKQPWKAEGMLQIMEEFHVQP 549
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E++ I P+ +ST++ + AG + C +Y M GVKP+ Y+ L RA+
Sbjct: 403 EEFYIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDGHAYSILAKGYVRAQEM 462
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + + MT +G+ PN + +++ + ++ + V+ +M E G+ ++ + TL
Sbjct: 463 EKAEELLTVMTKSGVQPNVVIFTTVMSGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETL 522
Query: 220 L 220
+
Sbjct: 523 I 523
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 69 KTGSSPKSYIW-VNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFD 125
K+G P + + + K ++ EK+ + K + PN F+T++ + + G D
Sbjct: 439 KSGVKPDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVIFTTVMSGWCSVGRMD 498
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+ V+++M GV PN+ T+ L+ AK+PW+ + + + M + + P +T +
Sbjct: 499 NAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVA 558
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
A+ A E ++ +K + M S+ N + A
Sbjct: 559 EAWCFAGLKEGAKTLLITVKTEKMINSIDGDNNITA 594
>gi|15219388|ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
DEFECTIVE 2217; Flags: Precursor
gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis thaliana]
gi|332198129|gb|AEE36250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + + +I +G D ++++MK ++P+ +++L+D+MG+A R +
Sbjct: 311 LDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKV 370
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM G P+ + SL+ +Y +A + L ++ EMK+ G + + LY ++ A
Sbjct: 371 YMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 430
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A +F+DM+ + P T+S ++ + + G+V A ++N M AG P L
Sbjct: 431 SGKLEVAMTVFKDMEKA-GFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLS 489
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ + D + L + +G + D
Sbjct: 490 SYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 196/443 (44%), Gaps = 47/443 (10%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ + K R + FS+L+ G AG D + VY EM+ G +P+ + +L+D+ +A
Sbjct: 338 QMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAG 397
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ EM +G PN+ Y ++ ++ ++ E ++V+++M++ G + + Y+
Sbjct: 398 KLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYS 457
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
LL M A G D A +I+ M ++ +P ++ S++T+ + + V A + EM
Sbjct: 458 CLLEMHAGSGQVDSAMKIYNSM-TNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-----RFCGCLLNVMTQT 332
G+ ++ + ++ Y K D ++ L + GI ++ F C+ N + +
Sbjct: 517 MGYSVDV-CASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDS 575
Query: 333 PKEELGKLVECVEKSN-----SKLGYVVKLLLEEQDIE-----------------GDF-- 368
+ L LV K + S L ++V+ E+++ + G F
Sbjct: 576 ARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSILSATKHKAHAFMCGLFTG 635
Query: 369 ---KKEAT-----ELFNSISKDVKKA----YCNCLIDLCVNLNLLENACKLLELGLTLEV 416
+K+ E + I ++++ + N L++ V + + A + ++ ++
Sbjct: 636 PEQRKQPVLTFVREFYQGIDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKL 695
Query: 417 YTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK 475
+ I WSL +++LS+GAAL A+ ++ K + P + + TG
Sbjct: 696 FPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKI 755
Query: 476 YSDKGLASV---FESHLKELNAP 495
+ L+SV FE L AP
Sbjct: 756 VIAQMLSSVESPFEVSKVVLRAP 778
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 144/318 (45%), Gaps = 10/318 (3%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+A+ +ID ++ L+ L+ G +YE M+ + TY ++ ++ ++
Sbjct: 268 KAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSG 327
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R ++++M + L P+++ ++SL+ + G+A + ++ VY EM+ G + S T++
Sbjct: 328 RLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV 387
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L+ A G D A ++++MK S +P+ ++ +I + GK+ A +F +M +
Sbjct: 388 SLIDSYAKAGKLDTALRLWDEMKKS-GFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
AGF P + L++ + + + D ++ N + G+ P ++++T + L
Sbjct: 447 AGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPG---LSSYISLLTLLANKRL 503
Query: 338 GKLVECVEKSNSKLGYVVK------LLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCL 391
+ + +GY V L++ +D D + S L
Sbjct: 504 VDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQL 563
Query: 392 IDLCVNLNLLENACKLLE 409
+ C+ L ++A LLE
Sbjct: 564 FESCMKNGLYDSARPLLE 581
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
NA++ +I+ A + +++ + G K + TYNNL+ P++ IY+
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + +TY ++ + ++ + ++++MKE+ ++ S +++++L+ G
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D + +++ +M+ + +P + F S+I + GK+ A +++EM ++GF PN + T
Sbjct: 364 LDTSMKVYMEMQGFGH-RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 422
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+I+ + K+ + + + + + G P CLL +
Sbjct: 423 MIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEM 462
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 126/273 (46%), Gaps = 16/273 (5%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSP---NWNTYASLLRAYGRARYGEDTLSVYR 202
Y L D + + + ++++++EM + S ++N Y +++ +A E ++
Sbjct: 208 YVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFK 267
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+ +E G ++ YN L+ + + G +AFEI+E M+ +++ D T+ +I +
Sbjct: 268 KAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLL-DGSTYELIIPSLAKS 326
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
G++ A +F +M E P+ V +SL+ GKA R D ++ + G P
Sbjct: 327 GRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMF 386
Query: 323 GCLLNVMTQTPKEELG-KLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
L++ + K + +L + ++KS G+ L IE K E+ ++ K
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKS----GFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 382 DVKKA-------YCNCLIDLCVNLNLLENACKL 407
D++KA +CL+++ +++A K+
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
>gi|297839813|ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
Length = 832
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + + +I +G D ++++MK ++P+ +++L+D+MG+A R +
Sbjct: 307 LDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKV 366
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM G P+ + SL+ +Y +A + L ++ EMK+ G + + LY ++ A
Sbjct: 367 YMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 426
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A +F+DM+ + P T+S ++ + + G+V A ++N M AG P L
Sbjct: 427 SGKLEVAMSVFKDMEKA-GFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLS 485
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ + D + L + +G + D
Sbjct: 486 SYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 518
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 196/443 (44%), Gaps = 47/443 (10%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ + K R + FS+L+ G AG D + VY EM+ G +P+ + +L+D+ +A
Sbjct: 334 QMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAG 393
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ EM +G PN+ Y ++ ++ ++ E +SV+++M++ G + + Y+
Sbjct: 394 KLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYS 453
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
LL M A G D A +I+ M ++ +P ++ S++T+ + + V A + EM
Sbjct: 454 CLLEMHAGSGQVDSAMKIYNSM-TNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 512
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD-----RFCGCLLNVMTQT 332
G+ ++ + ++ Y K D ++ L + GI ++ F C+ N + +
Sbjct: 513 MGYSVDV-CASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDS 571
Query: 333 PKEELGKLVECVEKSN-----SKLGYVVKLLLEEQDIE-----------------GDF-- 368
+ L LV K + S L ++V+ E+++ + G F
Sbjct: 572 ARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSILSATKHKAHAFMCGLFTG 631
Query: 369 ---KKEAT-----ELFNSISKDVKKA----YCNCLIDLCVNLNLLENACKLLELGLTLEV 416
+K+ E + I ++++ + N L++ V + + A + ++ ++
Sbjct: 632 PEQRKQPVLTFVREFYQGIDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKL 691
Query: 417 YTD-IQSRSPTQWSLHLKSLSLGAALTALHIWINDLSKALESGEEFPPLLGINTGHGKHK 475
+ I WSL +++LS+GAAL A+ ++ K + P + + TG
Sbjct: 692 FPKAIVFDQHIAWSLDVRNLSVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKI 751
Query: 476 YSDKGLASV---FESHLKELNAP 495
+ L+SV FE L AP
Sbjct: 752 VIAQVLSSVESPFEVSKVVLRAP 774
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 145/318 (45%), Gaps = 10/318 (3%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+A+ +ID ++ L+ L+ G +YE M+ + TY ++ ++ ++
Sbjct: 264 KAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSG 323
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R ++++M + L P+++ ++SL+ + G+A + ++ VY EM+ G + S T++
Sbjct: 324 RLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV 383
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L+ A G D A ++++MK S +P+ ++ +I + GK+ A ++F +M +
Sbjct: 384 SLIDSYAKAGKLDTALRLWDEMKKS-GFRPNFGLYTMIIESHAKSGKLEVAMSVFKDMEK 442
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
AGF P + L++ + + + D ++ N + G+ P ++++T + L
Sbjct: 443 AGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPG---LSSYISLLTLLANKRL 499
Query: 338 GKLVECVEKSNSKLGYVVK------LLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCL 391
+ + +GY V L++ +D D + S L
Sbjct: 500 VDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQL 559
Query: 392 IDLCVNLNLLENACKLLE 409
+ C+ L ++A LLE
Sbjct: 560 FESCMKNGLYDSARPLLE 577
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 108/220 (49%), Gaps = 1/220 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
A++ +I+ A + +++ + G K + TYNNL+ P++ IY+
Sbjct: 240 GAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 299
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M + +TY ++ + ++ + ++++MKE+ ++ S +++++L+ G
Sbjct: 300 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 359
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D + +++ +M+ + +P + F S+I + GK+ A +++EM ++GF PN + T
Sbjct: 360 LDTSMKVYMEMQGFGH-RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 418
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+I+ + K+ + + + + + G P CLL +
Sbjct: 419 MIIESHAKSGKLEVAMSVFKDMEKAGFLPTPSTYSCLLEM 458
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 125/273 (45%), Gaps = 16/273 (5%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSP---NWNTYASLLRAYGRARYGEDTLSVYR 202
Y L D + + + ++++++EM + S ++ Y +++ +A E ++
Sbjct: 204 YVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFGAYNQVIQYLAKAEKLEVAFCCFK 263
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+ +E G ++ YN L+ + + G +AFEI+E M+ +++ D T+ +I +
Sbjct: 264 KAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLL-DGSTYELIIPSLAKS 322
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
G++ A +F +M E P+ V +SL+ GKA R D ++ + G P
Sbjct: 323 GRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMF 382
Query: 323 GCLLNVMTQTPKEELG-KLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
L++ + K + +L + ++KS G+ L IE K E+ S+ K
Sbjct: 383 VSLIDSYAKAGKLDTALRLWDEMKKS----GFRPNFGLYTMIIESHAKSGKLEVAMSVFK 438
Query: 382 DVKKA-------YCNCLIDLCVNLNLLENACKL 407
D++KA +CL+++ +++A K+
Sbjct: 439 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 471
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 76 SYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMK 135
S+IW S + K+ EK YD + R D F+ LI+ YG A ++ ++V E MK
Sbjct: 275 SFIWAYGNSGQIEKM-EKWYD-EFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMK 332
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE 195
P ++T+N +++ GR +++ + +M G+ PN TY SL+ AY +A Y +
Sbjct: 333 KRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLK 392
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
S+ R+++ + L +N +L+ G + E+F MK C+PD+ TF++M
Sbjct: 393 KVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMK-ERKCKPDNITFATM 451
Query: 256 ITICSCRGKVSEAEAMFNEML 276
I + +G + A+ + M+
Sbjct: 452 IQAYNAQGMIEAAQNLEVNMI 472
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 3/246 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LIK T G FD ++ EM +G++ + +TYN ++D G+A +++
Sbjct: 198 DVYTYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSL 257
Query: 167 KEMTDNGLS-PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM ++G P+ T S + AYG + E Y E + G++ + +N L+
Sbjct: 258 TEMIESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGK 317
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++ + E MK P TF+ +I + G + + E F +M G +PN
Sbjct: 318 ACMYEKMVSVMEFMKK-RFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSI 376
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
SL+ Y KA V L ++ +T D F C+L+ Q E +G+L +
Sbjct: 377 TYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVM 436
Query: 345 EKSNSK 350
++ K
Sbjct: 437 KERKCK 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+P TY LL +G+ K+P Q +++ M GL P + Y +L+ AYG +
Sbjct: 125 EPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVYTALVSAYGHS-------- 176
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
G D+AF EDMKS +C+PD +T+S +I C
Sbjct: 177 ---------------------------GQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCC 209
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ G+ E +F EM G E + ++I YGKA + + +L + E G D
Sbjct: 210 TTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPD 269
Query: 320 RF 321
F
Sbjct: 270 IF 271
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 113/226 (50%), Gaps = 16/226 (7%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++TLI Y GN + + V +M G++PN+IT++ L+D +A + +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
Y EM GL P+ Y +L+ + + ++ +++EM+E G+ +V + L+ +C
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Query: 225 DVGYTDEAFEIF-----EDMKSSEN-------CQPDSWTFSSMITICSCRGKVSEAEAMF 272
D G +A ++F D S+ C P+ ++++I G++ +A F
Sbjct: 521 D-GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFF 579
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++M +G P++F +IQ + +A DV+ + ++GI P+
Sbjct: 580 SDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 104 WRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+ + PN F + LI Y AGN L+++ E++ + P++ TY+ L+ + R +
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +EM G PN TY +L+ Y + E + V +M EKG++ ++ ++TL+
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G + A ++ +M + PD ++++I G EA + EM EAG
Sbjct: 447 GYCKAGKMEAAMGLYTEM-VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVR 305
PN+F L+ LI K R D ++
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIK 529
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 22/239 (9%)
Query: 102 EKWRIDPNAFSTLIKLYGTAG-----NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
EK I P+ F+ I + G G DG L +EMK G PN +TYN L+D +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLL---QEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + +MT+ G+ PN T+++L+ Y +A E + +Y EM KG+ V Y
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF---- 272
L+ G T EAF + ++M+ + P+ +T S +I G++S+A +F
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEA-GLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535
Query: 273 ---------NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
NE+ + PN + T+LIQ R + + + G+ PD C
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+M + GV PN+ YN L+D +A + +++ E+ + + P+ TY+ L++
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD 382
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
E+ + +EMK+KG + YNTL+ G ++A E+ M + + +P+ TF
Sbjct: 383 RMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM-TEKGIEPNIITF 441
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
S++I GK+ A ++ EM+ G P++ T+LI + K T + R + E
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 313 LGITPDDRFCGCLLN 327
G+ P+ CL++
Sbjct: 502 AGLHPNVFTLSCLID 516
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G FD VY +M A G PN++TY L+D R + ++ EM + + P Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231
Query: 182 ASLLRAY-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
L+R G +R E S++R M+ GM ++ YNT++ + + +A E++ +M
Sbjct: 232 TILIRGLCGESRISEAE-SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM- 289
Query: 241 SSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ P+ TF +I +C VS A +M G PN+FV LI Y KA
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVS-ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 300 TDDVVRALNRLPELGITPD 318
+ + + + + I PD
Sbjct: 349 LSEALSLHSEIEKHEILPD 367
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T++ Y + L +Y EM G+ PN++T+ L+D + + +
Sbjct: 261 PNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKF 320
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+M G+ PN Y L+ Y +A + LS++ E+++ + V Y+ L+
Sbjct: 321 LIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCG 380
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
V +EA + ++MK + P++ T++++I G + +A + ++M E G EPN+
Sbjct: 381 VDRMEEADGLLQEMK-KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII 439
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++LI Y KA + + + + G+ PD
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 22/251 (8%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
R S++ ++ +R E + PN F LI + G + L VY +M V P M
Sbjct: 104 RRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQA 160
Query: 146 YNNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
N +LD + GR W+V Y +M G SPN TY +L+ G R G D L +R
Sbjct: 161 CNMVLDGLVKKGRFDTMWKV---YGDMVARGASPNVVTYGTLID--GCCRQG-DFLKAFR 214
Query: 203 ---EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
EM EK + +V +Y L+ EA +F M++S P+ +T+++M+
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNS-GMLPNLYTYNTMMDGY 273
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA---LNRLPELGIT 316
V +A ++ EML G PN+ LI K TD++V A L + G+
Sbjct: 274 CKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCK---TDEMVSARKFLIDMASFGVV 330
Query: 317 PDDRFCGCLLN 327
P+ CL++
Sbjct: 331 PNIFVYNCLID 341
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 142/347 (40%), Gaps = 52/347 (14%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + TLI G+F +++EM + P ++ Y L+ + R + +++
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESM 250
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT----------- 214
++ M ++G+ PN TY +++ Y + + + L +Y EM G+ +V
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCK 310
Query: 215 ------------------------LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+YN L+ G EA + +++ E PD +
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE-ILPDVF 369
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+S +I ++ EA+ + EM + GF PN +LI Y K + + +++
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEE--LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDF 368
E GI P+ L++ + K E +G E V K G + ++ I+G F
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-----GLLPDVVAYTALIDGHF 484
Query: 369 KKEATELFNSISKDVKKA-------YCNCLIDLCVNLNLLENACKLL 408
K T+ + K++++A +CLID + +A KL
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
>gi|414868297|tpg|DAA46854.1| TPA: hypothetical protein ZEAMMB73_384018 [Zea mays]
Length = 504
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 110 AFSTLIKLY-GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+F+TLI Y +G + L + E M+ G+ PN +TYN ++ + + R Q + I E
Sbjct: 248 SFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLCKEGRMHQARRIVNE 307
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G++PN T+ +L+ +Y E + ++ EM + G+ + YN L+ + G
Sbjct: 308 MRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLVTYNALILGLCNEGK 367
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE-AEAMFNEMLEAGFEPNLFVL 287
T +A ++ +++ +++ +P++ TFS++I I C+ + E A + N M +AGF+PN +
Sbjct: 368 TWKASQLVQELCAAK-LEPNASTFSALI-IGQCKKQNPERALDLLNAMKKAGFQPNYYTY 425
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI + K + + + L + I PD
Sbjct: 426 SILISTFSKNKDFEGAIDVLKDMLMRCIAPD 456
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
Y M+A G+ P + + N + R +RP + ++EM +SPN T ++RA
Sbjct: 164 YRAMRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKCA 223
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM-CADVGYTDEAFEIFEDMKSSENCQPDS 249
D + EM G + +NTL+A C D G + + E M+ E P+
Sbjct: 224 LGRVVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERME-REGLVPNE 282
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
T+++++ G++ +A + NEM G PN +LI Y
Sbjct: 283 VTYNTIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSY 327
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+TLI Y T G+ + + ++EEM G+ +++TYN L+ + + W+
Sbjct: 313 VTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLVTYNALILGLCNEGKTWKAS 372
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +E+ L PN +T+++L+ + + E L + MK+ G Q + Y+ L++
Sbjct: 373 QLVQELCAAKLEPNASTFSALIIGQCKKQNPERALDLLNAMKKAGFQPNYYTYSILISTF 432
Query: 224 ADVGYTDEAFEIFEDM 239
+ + A ++ +DM
Sbjct: 433 SKNKDFEGAIDVLKDM 448
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
++ + EM+ V PN+ T N ++ R + EM G S ++ +L+ A
Sbjct: 196 ISFFREMRRCRVSPNVYTVNMVMRAKCALGRVVDAAQLLDEMPCWGFSRTAASFNTLIAA 255
Query: 188 YGRARYGEDTLSVYRE-MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
Y G +T+ +E M+ +G+ + YNT++ G +A I +M+ +
Sbjct: 256 YCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLCKEGRMHQARRIVNEMR-VKGVT 314
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
P++ TF+++I G A M EM++AG +L +LI
Sbjct: 315 PNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLVTYNALI 359
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAK 157
+ +I PN F+ +I G + +V E+MK G PN+++YN L+D +G
Sbjct: 216 RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNG 275
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++ + KEM +N +SPN T+ L+ + + ++ V++EM ++ ++ +V YN
Sbjct: 276 KMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYN 335
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L+ + G EA + + M S+ QP+ T++++I + EA MF +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSA-GVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
G P + LI Y K + DD + GI PD CL+ + + E
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 338 GK 339
K
Sbjct: 455 AK 456
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 4/214 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+ LI + N G + V++EM VKPN+I+YN+L++ + + +
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ +M G+ PN TY +L+ + + ++ L ++ +K +G + +YN L+
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+G D+ F + E+M+ E PD T++ +I G + A+ +F+++ G P+
Sbjct: 412 CKLGKIDDGFALKEEME-REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PD 469
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
L L++ Y + + L + ++G+ P
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ LI Y G D + EEM+ G+ P++ TYN L+ + R K ++ ++T
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL P+ T+ L+ Y R + +EM + G++ YN ++ G
Sbjct: 464 SKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A + M+ + + +++ ++ S +GK+ +A + NEMLE G PN
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 131/335 (39%), Gaps = 72/335 (21%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
L+ Y F+ ++ G K + ++ L+ + + R V+ +YKEM
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG-----Y 228
+ PN T+ ++ A + V +MK G +V YNTL+ +G Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 229 TDEA---------------------------------FEIFEDMKSSENCQPDSWTFSSM 255
+A ++F++M ++ +P+ +++S+
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM-LDQDVKPNVISYNSL 337
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I GK+SEA +M ++M+ AG +PNL +LI + K + + + G
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 316 TPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATEL 375
P R L++ + LGK+ + G+ +K EE + EG
Sbjct: 398 VPTTRMYNMLIDAYCK-----LGKIDD---------GFALK---EEMEREG--------- 431
Query: 376 FNSISKDVKKAYCNCLI-DLCVNLNLLENACKLLE 409
I DV NCLI LC N N +E A KL +
Sbjct: 432 ---IVPDV--GTYNCLIAGLCRNGN-IEAAKKLFD 460
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 111/224 (49%), Gaps = 3/224 (1%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R N +I+ +TL++ YG AG F+ + ++ MK+ GV P++IT+N+LL + +
Sbjct: 87 RRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRG 146
Query: 158 RPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R +++ EM G++P+ T+ L+R + + ++ ++EM + V Y
Sbjct: 147 RTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTY 206
Query: 217 NTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
NTL+ G A + + M K ++ PD T+++++ + ++ EA +F EM
Sbjct: 207 NTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEM 266
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL-NRLPELGITPD 318
+ G +PN +LI+ + Q+ D + L + G PD
Sbjct: 267 VSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPD 310
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW----QV 162
D F+ LI+ + D ++EM +P+++TYN L+D + RA + V
Sbjct: 167 DTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVV 226
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
K + K+M D LSP+ TY +L+R Y + ++ L V+ EM +G++ + YNTL+
Sbjct: 227 KGMVKKMKD--LSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKG 284
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+V D+ EI PD+ T+++++ G EA MF +M E +P
Sbjct: 285 LCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQP 344
Query: 283 NLFVLTSLIQCYGKAQRTD 301
+ + LI+ QR D
Sbjct: 345 DSATYSVLIR--NLCQRGD 361
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 89/195 (45%), Gaps = 15/195 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ AGNFD L ++++MK + V+P+ TY+ L+ + + + + ++
Sbjct: 310 DTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLF 369
Query: 167 KEMT-------DNGLSP---NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+++ D+G +P +N L G+ E V+R++ +KG Q +
Sbjct: 370 DKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAE---RVFRQLMKKGTQDPPSYK 426
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
++ C + G + +++ M + PD T+ +I +G+ A ML
Sbjct: 427 TLIIGHCKE-GTFEAGYKLLLFMLRRDYV-PDFETYVLLINGFLQKGEPILAYKTLERML 484
Query: 277 EAGFEPNLFVLTSLI 291
++ + P V S++
Sbjct: 485 KSSYLPKTSVFHSIL 499
>gi|193848521|gb|ACF22711.1| PPR protein [Brachypodium distachyon]
Length = 292
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R R E D ++TLI + G D + ++EEM+ P TYN +++ +G +
Sbjct: 53 RMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQE 112
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R V+T+ EM + GL PN TY +L+ YGR+ ++ + MK G++ S T+Y+
Sbjct: 113 RWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYH 172
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ A G D A + + M+ ++ + + +S++ +V EA ++ M E
Sbjct: 173 ALVNAYAQRGLADHALNVVKAMR-ADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKE 231
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ T+L++ + ++ D V + G PD
Sbjct: 232 NDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPD 272
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 155 RAKRPWQ-VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
R + WQ + +EM +G+ P+ + Y ++ +G+ + + M+E+G++ V
Sbjct: 4 RDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDV 63
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+NTL+ G D A E+FE+M+ S NC P + T++ MI + + + E M +
Sbjct: 64 VTWNTLIDAHRKGGRHDRAMELFEEMRES-NCPPGTTTYNIMINLLGEQERWVGVETMLS 122
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
EM E G PN+ T+L+ YG++ R + + + + G+ P L+N Q
Sbjct: 123 EMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQ 180
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++ +I +G ++ + M+ G++P+++T+N L+D + R + ++
Sbjct: 27 DRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELF 86
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM ++ P TY ++ G ++ EMKE+G+ ++ Y TL+ +
Sbjct: 87 EEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRS 146
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA E E MK ++ +P + +++ + RG A + M G E + V
Sbjct: 147 GRFKEAIECIEVMK-ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVV 205
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L SL+ +G+ +R + L + E + PD
Sbjct: 206 LNSLMNAFGEDRRVVEAFSVLQFMKENDLRPD 237
>gi|356573733|ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Glycine max]
Length = 752
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D + + +I +G D +++EMK G +P + + +L+D+MG+A R +
Sbjct: 227 LDGSTYELMIPNLAKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAMKV 286
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM G P Y SL+ +Y ++ E L ++ EM+ G + + LY ++ A
Sbjct: 287 YMEMRGYGYKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAK 346
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G + A F DM+ + P T++ ++ + + G++ A ++N M AG P L
Sbjct: 347 SGKLEIAMSTFLDMEKA-GFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLS 405
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T L+ + D + L + +G + D
Sbjct: 406 TYTVLLTLLANKKLVDVAAKILLEMKAMGYSVD 438
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 136/320 (42%), Gaps = 20/320 (6%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N ++D +++LI L+ G +YE M+ G + TY ++ + ++ R
Sbjct: 187 NAGCKVDTETYNSLITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPNLAKSGRLD 246
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+++EM G P N +ASL+ + G+A + + VY EM+ G + T+Y +L+
Sbjct: 247 AAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRLDSAMKVYMEMRGYGYKPPPTIYVSLI 306
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G + A ++++M+ + +P+ ++ +I + GK+ A + F +M +AGF
Sbjct: 307 ESYVKSGKLETALRLWDEMRMA-GFRPNFGLYTLIIESHAKSGKLEIAMSTFLDMEKAGF 365
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
P L++ + + + D ++ N + G+ P LL ++ KL
Sbjct: 366 LPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVLLTLLANK------KL 419
Query: 341 VECVEK---SNSKLGYVVKLLLEEQDIEGDFKKEAT--------ELFNSISKDVKKAYCN 389
V+ K +GY V + DI + KE + S
Sbjct: 420 VDVAAKILLEMKAMGYSVD--VTASDILMVYIKEGSVDLALRWLRFMGSSGIRTNNFIIR 477
Query: 390 CLIDLCVNLNLLENACKLLE 409
L + C+ L E+A LLE
Sbjct: 478 QLFESCMKSGLFESAKPLLE 497
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A + +I+ A + ++++ G K + TYN+L+ P++ +Y+ M
Sbjct: 161 ACNRVIRYLAKAEKLEVSFCCFKKILNAGCKVDTETYNSLITLFLNKGLPYKAFEMYESM 220
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G S + +TY ++ ++ + +++EMK +G + + ++ +L+ G
Sbjct: 221 EKAGCSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKAGRL 280
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D A +++ +M+ +P + S+I GK+ A +++EM AGF PN + T
Sbjct: 281 DSAMKVYMEMRGY-GYKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTL 339
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+I+ + K+ + + + + + G P CLL +
Sbjct: 340 IIESHAKSGKLEIAMSTFLDMEKAGFLPTPSTYACLLEM 378
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 165/420 (39%), Gaps = 43/420 (10%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R ++ P + +LI+ Y +G + L +++EM+ G +PN Y ++++ ++ +
Sbjct: 291 RGYGYKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLYTLIIESHAKSGKL 350
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + +M G P +TYA LL + + + + +Y M G++ ++ Y L
Sbjct: 351 EIAMSTFLDMEKAGFLPTPSTYACLLEMHAASGQIDPAMKLYNSMTNAGLRPGLSTYTVL 410
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L + A+ D A +I +MK+ T S ++ + G V A M +G
Sbjct: 411 LTLLANKKLVDVAAKILLEMKAMGYSV--DVTASDILMVYIKEGSVDLALRWLRFMGSSG 468
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
N F++ L + K+ + L D L + T L
Sbjct: 469 IRTNNFIIRQLFESCMKSGLFESAKPLLETYVNSAAKVD-------LILYTSI----LAH 517
Query: 340 LVECVEKSNSKLGYVVKLLLEEQDIEGDFK---------------KEATELFNSISKDVK 384
LV C E+ N + +++ +L + F E F I +++
Sbjct: 518 LVRCQEEKNER--HLMSILSATKHKAHSFMCGLFTGPEHRGQPVLTFVREFFQGIDYELE 575
Query: 385 ----KAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTD-IQSRSPTQWSLHLKSLSLGA 439
K + N L++ V + + A + ++ +++ I WSL +++LS+GA
Sbjct: 576 EGAAKYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGA 635
Query: 440 ALTALHIWINDLSKALESGEEFPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHDS 499
AL A+ ++ K + P + + TG L V L + +PF S
Sbjct: 636 ALIAVVHTLHRFRKRMLYYGIVPRRIKLVTG--------ATLKIVIAQMLSSVESPFEVS 687
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 123/246 (50%), Gaps = 6/246 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TLI + GN D + ++ +M P++ TYN L+D + +RP +
Sbjct: 135 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 194
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM G PN+ TY +L+ + ++ D ++ + M + + S +N ++ M
Sbjct: 195 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 254
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG-KVSEAEAMFNEMLEAGFEPNL 284
VG D A+E+F+ M + C PD +T++ MI+ +CR ++ +A + M EAG P++
Sbjct: 255 VGQLDLAYELFQLM-TDRGCLPDIYTYNIMISG-ACRANRIDDARQLLERMTEAGCPPDV 312
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVEC 343
S++ KA + D+ L G D C L++ + ++ + ++ KL+
Sbjct: 313 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 372
Query: 344 VEKSNS 349
+E++ S
Sbjct: 373 MERNGS 378
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+ E+M G PN++TYN L++ + + ++ +M +N SP+ TY L+ Y
Sbjct: 124 ILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYC 183
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ +D + +EM + G + + YNTL+ G +AF + + M +C+P
Sbjct: 184 KQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ-MMLRRDCKPSH 242
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+TF+ MI + G++ A +F M + G P+++ +I +A R DD + L R
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302
Query: 310 LPELGITPD 318
+ E G PD
Sbjct: 303 MTEAGCPPD 311
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N LL R K+ + ++K SP+ TY++L+ + +AR + + EM++
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+G+ +YNT++ D G D A + DM+ +C P T++ ++ ++S
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ--RHCAPSVITYTILVDALCKSARIS 119
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A + +M+EAG PN+ +LI + K D+ V N++ E +PD
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 171
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+ ITY+ L++ +A+ Q + EM G+ P+ Y ++++ + L
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 201 YREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
YR+M ++ SV Y L+ A+C +D + I EDM + C P+ T++++I
Sbjct: 91 YRDM-QRHCAPSVITYTILVDALCKSARISDASL-ILEDMIEA-GCAPNVVTYNTLINGF 147
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + EA +FN+MLE P++F LI Y K +R D + L + + G P+
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 206
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 1/205 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ +I ++ G D +++ M G P++ TYN ++ RA R + + + MT
Sbjct: 245 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 304
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G P+ TY S++ +A ++ VY ++ G L V +TL+ D
Sbjct: 305 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 364
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A ++ +M+ + + PD ++ +I ++ ++ A F+EML+ G P + + +
Sbjct: 365 DAEKLLREMERNGS-APDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 423
Query: 291 IQCYGKAQRTDDVVRALNRLPELGI 315
I K+ R D L + E G+
Sbjct: 424 IDKLCKSARVRDGCMLLKTMLERGV 448
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI + A +F + +EM+ G+ P+ YN ++ + R Y
Sbjct: 32 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + +P+ TY L+ A ++ D + +M E G +V YNTL+ +
Sbjct: 92 RDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA +F M + +C PD +T++ +I + + + + EM++ G EPN
Sbjct: 151 GNMDEAVVLFNQMLEN-SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209
Query: 287 LTSLI 291
+L+
Sbjct: 210 YNTLM 214
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 3/174 (1%)
Query: 108 PNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ ++ I + G A D + E M G P+++TYN+++ + +A + + +
Sbjct: 275 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 334
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y+ + + G + T ++L+ ++R +D + REM+ G V Y L+
Sbjct: 335 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 394
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
D++ F +M + C P T+S +I +V + + MLE G
Sbjct: 395 ADQLDKSLAFFSEML-DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 59/114 (51%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++++ A D VYE ++ G +++T + L+D + +++R + +
Sbjct: 311 DVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL 370
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+EM NG +P+ Y L+ + +A + +L+ + EM +KG +V Y+ ++
Sbjct: 371 REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVI 424
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ ++ R D +F+ LIK + + L+ + ++ +G+ P+++T+N LL +
Sbjct: 104 KMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVED 163
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + ++ +M + PN T+ +L+ R + +++ M E G+Q + Y
Sbjct: 164 RVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
T++ +G T A ++ M+ + P+ +S++I G+ S+A+ +F EM E
Sbjct: 224 TIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
G P+LF S+I + + R D + L + E I+PD L+N + K
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 2/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+ T++ G+ L++ +M+ I + PN++ Y+ ++D++ + R + ++ EM
Sbjct: 222 YGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ G+ P+ TY S++ + + D + +EM E+ + V YN L+ G
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA E++++M P++ T+SSMI + ++ AE MF M G PNL +
Sbjct: 342 FEAEELYDEML-PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI Y A+R DD + L+ + E G+ D
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 47/261 (18%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+I P+ ++ LI + G F +Y+EM G+ PN ITY++++D + R
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-- 220
+ ++ M G SPN T+ +L+ Y A+ +D + + EM E G+ T YNTL+
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 221 --------------------AMCADV-------------GYTDEAFEIFEDMKSSE---- 243
+C D+ G +A E+F+ M+ S+
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 244 ------NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
+PD T++ +I+ GK EAE ++ EM G P+ +S+I K
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 298 QRTDDVVRALNRLPELGITPD 318
R D+ + + + +P+
Sbjct: 560 SRLDEATQMFDSMGSKSFSPN 580
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN F+TLI Y A D + + EM G+ + TYN L+ +
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-----------KGMQLSVT 214
+EM +GL P+ T +LL +D L +++ M++ G++ V
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
YN L++ + G EA E++E+M PD+ T+SSMI + ++ EA MF+
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPH-RGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M F PN+ T+LI Y KA R DD + + GI +
Sbjct: 572 MGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI G F +YEEM G+ P+ ITY++++D + + R + ++
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M SPN T+ +L+ Y +A +D L ++ EM +G+ + Y TL+ V
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
G + A +IF++M SS PD+ T +M+T + ++ A AM ++
Sbjct: 630 GNINGALDIFQEMISS-GVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 16/252 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQV- 162
D ++TLI + G+ + L++ +EM + G+ P+++T + LLD + G+ K ++
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF 488
Query: 163 KTIYKEMTD-------NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
K + K D NG+ P+ TY L+ + +Y EM +G+
Sbjct: 489 KVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTIT 548
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
Y++++ DEA ++F+ M S++ P+ TF+++I G+V + +F EM
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFDSM-GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM 607
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT-PK 334
G N +LI + K + + + G+ PD + N++T K
Sbjct: 608 GRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI---TIRNMLTGLWSK 664
Query: 335 EELGKLVECVEK 346
EEL + V +EK
Sbjct: 665 EELKRAVAMLEK 676
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 3/262 (1%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ LI+ AG + EM+ +G++P+ YN LL+ + + +M
Sbjct: 88 AYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQM 147
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
D+G++ N TY LL AY RA ED+ V EMK +G++L Y+TL+ + D G
Sbjct: 148 ADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMW 207
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A ++ +M+ + D ++ +I G++++A +F++M G +P++ S
Sbjct: 208 KKATDLIMEMQEL-GVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNS 266
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI+ + + T +R + E G+ PD + +++ + + K +E+ KL +
Sbjct: 267 LIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRG 326
Query: 349 SK-LGYVVKLLLEEQDIEGDFK 369
K G V +L++ G F+
Sbjct: 327 LKESGAVYAVLVDIYGQYGHFR 348
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 123/279 (44%), Gaps = 35/279 (12%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDT-RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
++Y+ + RA +L++ + + R+D +STL++LY G + ++ E
Sbjct: 157 RTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIME 216
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ +GV+ ++ YN L+DT G+ + + ++ +M G+ P+ T+ SL+R + R
Sbjct: 217 MQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGN 276
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS------------ 241
+ L + M+E+GM ++ T+++ + G DE ++F M++
Sbjct: 277 TKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAV 336
Query: 242 ----------------------SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+EN Q F + + +G + + M G
Sbjct: 337 LVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEG 396
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EPNL +L LI +G A R + + L + + G++PD
Sbjct: 397 IEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPD 435
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ E ++ P+ F L Y G + +NV + M+A G++PN++ N L++ G A R
Sbjct: 358 KAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRH 417
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ + + + D+G+SP+ TY +L++A+ RA+ E VY+EM+ G
Sbjct: 418 LEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAG 466
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + LI +GTAG L V + +K G+ P+++TY L+ RAK+ +V
Sbjct: 397 IEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVS 456
Query: 164 TIYKEMTDNGLSPN 177
+YKEM G +P+
Sbjct: 457 EVYKEMEGAGCTPD 470
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Query: 74 PKSYIWVNPKSPRASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYE 132
PK ++ + + K E K RN + ++ L+ +YG G+F +
Sbjct: 296 PKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVA 355
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+KA ++ + + L + + Q + + M G+ PN L+ A+G A
Sbjct: 356 ALKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAG 415
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
+ L+V + +K+ GM V Y TL+ ++ E++++M+ + C PD
Sbjct: 416 RHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGA-GCTPD 470
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 4/262 (1%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDTRARNEK-WRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
+SY + +A + +E S A ++ + +D A++ ++ + +G D EE
Sbjct: 60 RSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEE 119
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
MK V P + TY +++D + + R + +++E G+ N Y+SL+ +G+
Sbjct: 120 MKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 179
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
++ + EM +KG+ +V +N+L+ +EA F+ MK + C P+++T+S
Sbjct: 180 IDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMK-CSPNTYTYS 238
Query: 254 SMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+I +C + K ++A + EM + G PN+ T++I K D R
Sbjct: 239 ILINGLCRVQ-KYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKA 297
Query: 313 LGITPDDRFCGCLLNVMTQTPK 334
G PD L+ M+ +
Sbjct: 298 NGGIPDAASFNALIEGMSHANR 319
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
+++EM G +P++ N +D + +A + + I++++ G P+ +Y+ L+
Sbjct: 11 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 70
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+A +T S++ MK++G L YN ++ G D+A+E E+MK ++ P
Sbjct: 71 KAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMK-VKHVPPTV 129
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T+ S+I + ++ EA +F E G E N+ V +SLI +GK R D+ L
Sbjct: 130 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 189
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ + G+ P+ L++ + + EE+ + + C +
Sbjct: 190 MMKKGLAPNVYTWNSLMDALVKA--EEINEALICFQ 223
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 1/200 (0%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A+++ ++ +S+LI +G G D + EEM G+ PN+ T+N+L+D + +A+
Sbjct: 155 AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEE 214
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ ++ M + SPN TY+ L+ R + ++EM+++G+ +V Y T
Sbjct: 215 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 274
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
+++ A VG +A +FE K++ PD+ +F+++I S + EA +F E
Sbjct: 275 MISGLAKVGNITDACSLFERFKANGGI-PDAASFNALIEGMSHANRAIEAYHVFEETRLR 333
Query: 279 GFEPNLFVLTSLIQCYGKAQ 298
G N+ SL+ KA+
Sbjct: 334 GCRINVKACISLLDALNKAE 353
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
AG+ + ++E++K G P++ +Y+ L+ + +A + + +I+ M G + +
Sbjct: 37 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARA 96
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y +++ + ++ + EMK K + +V Y +++ A + DEA+ +FE+ K
Sbjct: 97 YNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 156
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
S+ + + +SS+I G++ EA + EM++ G PN++ SL+ KA+
Sbjct: 157 -SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEI 215
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
++ + + E+ +P+ L+N + + K
Sbjct: 216 NEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 249
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++S LI AG +++ MK G + YN ++D ++ + +
Sbjct: 58 DVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEAL 117
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + P TY S++ + ++ ++ E K KG++L+V +Y++L+ V
Sbjct: 118 EEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKV 177
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA+ I E+M + P+ +T++S++ +++EA F M E PN +
Sbjct: 178 GRIDEAYLILEEM-MKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYT 236
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI + Q+ + + + G+ P+
Sbjct: 237 YSILINGLCRVQKYNKAFVFWQEMQKQGLVPN 268
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
ED +++EM +G Q +TL NT + G ++ IFED+K PD ++S
Sbjct: 6 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY-GFLPDVRSYSI 64
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
+I + G+ E ++F+ M + GF + +++ + K+ + D AL +
Sbjct: 65 LIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKH 124
Query: 315 ITPDDRFCGCLLNVMTQTPK 334
+ P G +++ + + +
Sbjct: 125 VPPTVATYGSIIDGLAKIDR 144
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K + PN ++T+I GN +++E KA G P+ ++N L++ M A R
Sbjct: 261 QKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRA 320
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+ +++E G N SLL A +A E V ++E
Sbjct: 321 IEAYHVFEETRLRGCRINVKACISLLDALNKAECIEQAAVVGAVLRE 367
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 117/245 (47%), Gaps = 6/245 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++T+I + G + N++ EM G+ PN++TY ++D + +A+ + K ++
Sbjct: 160 DVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVF 219
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M D G+ P+ TY L+ Y ++ + + EM G++ Y LL
Sbjct: 220 QQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKN 279
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA +F D + +PD ++ ++ + +G +SE + + M+ G PN +
Sbjct: 280 GRCREA-RLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRI 338
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEK 346
+ Y K ++ + N++ + G++PD G L++ + + LG++ + V +
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCK-----LGRVDDAVLQ 393
Query: 347 SNSKL 351
N +
Sbjct: 394 FNQMI 398
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 7/265 (2%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D F+TL+ G + + M +GV+PN+I+YN L+ R + +
Sbjct: 439 VDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKL 498
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M NGL PN TY LLR Y +AR +D S++REM KG+ V YNT+L
Sbjct: 499 LDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQ 558
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA E++ +M +S + D +T++ ++ V EA MF + + +
Sbjct: 559 TGRFSEANELYLNMINSRT-KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSV 617
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECV 344
+I K R +D + + G+ PD + N++ + E L +
Sbjct: 618 TFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAM 677
Query: 345 EKSNSK-----LGYVVKLLLEEQDI 364
EKS + L +V+ LL DI
Sbjct: 678 EKSGTAPNSHMLNALVRRLLHRGDI 702
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 110/231 (47%), Gaps = 8/231 (3%)
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA---KRPWQVKTIYKEMT---DN 172
G+ G D L +++E+ ++ +N LL + RA +V +++ M +
Sbjct: 26 GSLG-LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSS 84
Query: 173 GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEA 232
++PN TY+ L+ + R E + + + + G +++V + + LL D DEA
Sbjct: 85 KVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEA 144
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
+I S C PD ++++I G+V +A +F EM++ G PN+ T++I
Sbjct: 145 TDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVID 204
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVE 342
KAQ D ++ + G+ PD+ CL++ T K +E+ +++E
Sbjct: 205 GLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLE 255
>gi|297820862|ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324152|gb|EFH54573.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 475
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 8/231 (3%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
VYE+M G P+++TYN LL T R + + ++ EM +GLSP++ TY LL G
Sbjct: 243 VYEQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGLSPDFYTYNILLHILG 302
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ L+ MKE G+ LSV Y TL+ + G EA + F D C+PD
Sbjct: 303 KGNKPLAALTTLNHMKEVGIDLSVLHYTTLIDGLSRAG-NLEACKYFLDEMVKAGCRPDV 361
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++ MIT G++ +A+ MF EM G PN+F S+I+ A + L
Sbjct: 362 VCYTVMITGYVVSGELEKAKEMFKEMTVEGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 421
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVEC--VEKSNSKLGYVVKLL 358
+ G P+ L++ + + GKL E V + K G+ V L+
Sbjct: 422 MESRGCNPNFVVYSTLVSYLRKA-----GKLSEARKVIRDMVKKGHYVHLV 467
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 1/193 (0%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G D +++EM G+ P+ TYN LL +G+ +P T M + G+ + Y
Sbjct: 270 GKMDRFDRLFDEMARDGLSPDFYTYNILLHILGKGNKPLAALTTLNHMKEVGIDLSVLHY 329
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+L+ RA E EM + G + V Y ++ G ++A E+F++M +
Sbjct: 330 TTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKEM-T 388
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
E P+ +T++SMI G+ EA + EM G PN V ++L+ KA +
Sbjct: 389 VEGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLS 448
Query: 302 DVVRALNRLPELG 314
+ + + + + G
Sbjct: 449 EARKVIRDMVKKG 461
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 78 IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI 137
+W N + + + ++ +D AR + D ++ L+ + G L MK +
Sbjct: 263 LWTNYRLGKMDRF-DRLFDEMAR-DGLSPDFYTYNILLHILGKGNKPLAALTTLNHMKEV 320
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G+ +++ Y L+D + RA K EM G P+ Y ++ Y + E
Sbjct: 321 GIDLSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKA 380
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+++EM +G +V YN+++ G EA + ++M+ S C P+ +S++++
Sbjct: 381 KEMFKEMTVEGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME-SRGCNPNFVVYSTLVS 439
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
GK+SEA + +M++ G +L
Sbjct: 440 YLRKAGKLSEARKVIRDMVKKGHYVHL 466
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
N+Y L++ + + + EM + G + +N L+ C + G +A + +
Sbjct: 152 NSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQA--VVQF 209
Query: 239 MKSSE-NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
MKS N +P ++++++ + E ++ +MLE GF P++ L+ +
Sbjct: 210 MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYEQMLEDGFSPDVLTYNILLWTNYRL 269
Query: 298 QRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+ D R + + G++PD LL+++ + K
Sbjct: 270 GKMDRFDRLFDEMARDGLSPDFYTYNILLHILGKGNK 306
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 6/229 (2%)
Query: 92 EKSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK YD K IDP+ F S+LI + D +++E M + PN++TYN L
Sbjct: 350 EKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
++ +AKR + +++EM+ GL N TY +L+ + +AR ++ V+++M G+
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
++ YNTLL G ++A +FE ++ S+ +P +T++ MI GKV +
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F + G +P++ + ++I + + ++ ++ E G PD
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G+ D N+ +M+A ++ N++ Y+ ++D++ + + ++ EM + G+ PN TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+SL+ D + +M E+ + +V +N L+ G EA +++++M
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM-I 357
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
+ PD +T+SS+I ++ EA+ MF M+ PN+ +LI + KA+R D
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 302 DVVRALNRLPELGIT 316
+ V + + G+
Sbjct: 418 EGVELFREMSQRGLV 432
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 125/251 (49%), Gaps = 5/251 (1%)
Query: 94 SYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
+++ + E +I+ N +ST+I + D LN++ EM+ GV+PN+ITY++L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ +R + +M + ++PN T+ +L+ A+ + + +Y EM ++ +
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEA 270
+ Y++L+ DEA +FE M S++C P+ T++++I C + ++ E
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYNTLINGFCKAK-RIDEGVE 421
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
+F EM + G N T+LI + +A+ D+ ++ G+ P+ LL+ +
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 331 QTPKEELGKLV 341
+ K E +V
Sbjct: 482 KNGKLEKAMVV 492
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+I+PN F+ LI + G +Y+EM + P++ TY++L++ R +
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
K +++ M PN TY +L+ + +A+ ++ + ++REM ++G+ + Y TL+
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
D A +F+ M S+ P+ T+++++ GK+ +A +F + + EP
Sbjct: 445 FFQARDCDNAQMVFKQM-VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ +I+ KA + +D L G+ PD
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ L+ FD +++ E+M+ +G+ N+ TYN L++ R + + +M
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T +SLL Y + D +++ +M E G + + TL+
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + + M CQP+ T+ ++ RG + A + N+M A E N+ + +++
Sbjct: 208 EAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
I K + DD + + G+ P+
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPN 294
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 119/290 (41%), Gaps = 8/290 (2%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T N+ R + +S+LI + + +M + PN++T+N L+D +
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + + +Y EM + P+ TY+SL+ + ++ ++ M K +V Y
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NTL+ DE E+F +M S ++ T++++I A+ +F +M+
Sbjct: 404 NTLINGFCKAKRIDEGVELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
G PN+ +L+ K + + + L + P ++ M + K E
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 337 LGKLVECVEKSNSKLGYVVKLLLEEQDIEG----DFKKEATELFNSISKD 382
G + C S S G +++ I G K+EA LF + +D
Sbjct: 523 DGWDLFC---SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y +LR + +D + ++ M + S+ +N LL+ A + D + E M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 241 SSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ +T++ +I C CR ++S A A+ +M++ G+EP++ L+SL+ Y +R
Sbjct: 113 RL-GISHNLYTYNILIN-CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 300 TDDVVRALNRLPELGITPD 318
D V ++++ E+G PD
Sbjct: 171 ISDAVALVDQMVEMGYRPD 189
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+F L++ + AG LNV++ M +G +P++ + N LL+ + ++ P +Y +M
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+ P+ T A + +AY R + EM+ G+++++ Y+ ++ +G+T
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269
Query: 230 DEAFEIFE-----------------------------------DMKSSENCQPDSWTFSS 254
++A I E +MK + + D +
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
MI RG++ +A + NEM +AG NLFV ++I K R ++V + L + ++G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 315 ITPD 318
+ PD
Sbjct: 390 MRPD 393
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D A+ +I Y G D V EM+ G+ N+ YN +++ + + R +V+ +
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM D G+ P+ +Y +L+ Y R + R M G+ + YNTLL
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ D+A ++ M P+ + S+++ GK +A ++ E L G N+
Sbjct: 442 LHAIDDALRLWFLML-KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVI 500
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I K R + L+R+ EL PD
Sbjct: 501 TFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F++ I + A + +++ EM A G+ PN++TY L+ + + +Y EM
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 171 DNGLSPNWNTYASLLRA-YGRARYGEDTL-------------------------SVYREM 204
+NG++PN ++L+ Y + E L V +
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTI 691
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ + ++N ++ G +A +FE +++ + PD++T+SS+I C+ G
Sbjct: 692 ADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRN-KRFLPDNFTYSSLIHGCAASGS 750
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EA ++ + ML AG PN+ SLI K+ + V N+L GI+P+
Sbjct: 751 IDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPN 804
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 39/267 (14%)
Query: 108 PNAFSTLI--KLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ F+ I K Y G + EEM+ +G++ N++ Y+ ++D + I
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275
Query: 166 YKEMTDNGLSPNWNTYASLLRAY---GR---------------------ARYG------- 194
+ + GLSPN TY L++ Y GR YG
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335
Query: 195 -----EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+D V EM++ G+ +++ +YNT++ +G +E ++ ++M+ +PD
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV-GMRPDK 394
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++++++I G + +A M M+ G +L++ + DD +R
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEE 336
+ + G+ P++ C LL+ + + K E
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTE 481
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + PN S TL+ AG + LN+++E A G+ N+IT+N +++ + + R
Sbjct: 457 KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMA 516
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + + M + P+ TY +L Y + + +M+ G SV ++N+ +
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ +I +M S+ P+ T+ ++I G + EA ++ EM+ G
Sbjct: 577 TGHFIAKQWHKVNDIHSEM-SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
PN+F+ ++L+ C+ K + D+ L +L + + P
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 1/222 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +++TLI Y G+ + M G+ +TYN LL
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ M G++PN + ++LL +A E L++++E +G+ +V +NT++
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G EA E+ + MK C PDS T+ ++ G++ A + N+M GF P++
Sbjct: 511 KIGRMAEAEELLDRMKELR-CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+ S I + A++ V + + G++P+ G L+
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 28/212 (13%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
KS RN+++ D +S+LI +G+ D ++ + M + G+ PN+ITYN+L+
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ ++ + + ++ ++ G+SPN TY +L+ Y + + + ++M E+
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEE----- 834
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
GY +EA ++ + M + N P+ T+ ++I G + E ++
Sbjct: 835 --------------GYMEEAIKLLDQMIEN-NVDPNYITYCTLIHGYIKSGNMEEISKLY 879
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+EM G P ++ G +R+D VV
Sbjct: 880 DEMHIRGLLPTNWI--------GNWKRSDPVV 903
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 127/251 (50%), Gaps = 11/251 (4%)
Query: 74 PKSYIWVNP-KSPRASKLKEKSYDTR--ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNV 130
P Y++++ ++ + L EK DT R + + D ++ +I G A D +
Sbjct: 158 PDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVKCDEAMYNCIINCCGRAIPVDELSRI 217
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
++EM G N +T+N LLD G+A + + ++ GL+ + +Y +++ AY +
Sbjct: 218 FDEMLQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFIMARKQGLA-DIISYNTIIAAYAK 276
Query: 191 ARYGEDTLSV---YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
G + LS+ + M++ G +S+ YN +L G +E + + MK ++ C+
Sbjct: 277 ---GGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQKMKRAK-CKF 332
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D +T++ MI I RG + + + E+ + G EP+L+ +LI+ YG A+ +D V+ +
Sbjct: 333 DHYTYNIMINIYGRRGWIQDVSNVLAELKDRGVEPDLYSYNTLIKAYGIARMPEDAVKLM 392
Query: 308 NRLPELGITPD 318
+ GI+PD
Sbjct: 393 QEMRVKGISPD 403
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ ++ YG AG + +V ++MK K + TYN +++ GR V + E+
Sbjct: 301 AYNCMLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAEL 360
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
D G+ P+ +Y +L++AYG AR ED + + +EM+ KG+ Y L+A
Sbjct: 361 KDRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRVKGISPDRVTYANLIA 412
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++T+I Y GNF + M+ G ++ YN +LD G+A R + ++
Sbjct: 263 DIISYNTIIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVL 322
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + TY ++ YGR + +D +V E+K++G++ + YNTL+
Sbjct: 323 QKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRGVEPDLYSYNTLIKAYGIA 382
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++A ++ ++M+ + PD T++++I
Sbjct: 383 RMPEDAVKLMQEMR-VKGISPDRVTYANLIA 412
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A +L+E S + + K + D ++ +I +YG G NV E+K GV+P++
Sbjct: 311 KAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRGVEPDLY 370
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+YN L+ G A+ P + +EM G+SP+ TYA+L+ A R
Sbjct: 371 SYNTLIKAYGIARMPEDAVKLMQEMRVKGISPDRVTYANLIAALQR 416
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 100 RNEKWR---IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
R +KW+ + N + LI GN++ + +Y +M PN ++D
Sbjct: 43 REKKWKDSAFEDNLYHILICSCKEGGNYNDAVRIYNQMPKSETHPNPRISCTMIDVFSTM 102
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM-KEKGMQLSVTL 215
+R +TI E+ + + Y+ ++R Y +AR +D SV EM K+K + L
Sbjct: 103 ERFADAETILLELKASASVLDMIAYSVIVRMYIKARRLKDACSVLAEMEKQKEIIPDKYL 162
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
+ +L G ++ + + ++ S+ + D ++ +I C V E +F+EM
Sbjct: 163 FLDMLRTYQKCGLLEKLADTYYWIRKSQ-VKCDEAMYNCIINCCGRAIPVDELSRIFDEM 221
Query: 276 LEAGFEPNLFVLTSLIQCYGKA 297
L+ G N L+ YGKA
Sbjct: 222 LQQGHLANTVTFNVLLDIYGKA 243
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 97/257 (37%), Gaps = 36/257 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+P T+I ++ T F + E+KA +MI Y+ ++ +A+R ++
Sbjct: 88 NPRISCTMIDVFSTMERFADAETILLELKASASVLDMIAYSVIVRMYIKARRLKDACSVL 147
Query: 167 KEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
EM + P+ + +LR Y + E Y +++ ++ +YN ++ C
Sbjct: 148 AEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVKCDEAMYNCIINCCGR 207
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF------------- 272
DE IF++M + ++ TF+ ++ I G + AE +F
Sbjct: 208 AIPVDELSRIFDEMLQQGHL-ANTVTFNVLLDIYGKAGLFNRAEKVFIMARKQGLADIIS 266
Query: 273 ---------------------NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
M +AGF +L ++ YGKA R ++ L ++
Sbjct: 267 YNTIIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASVLQKMK 326
Query: 312 ELGITPDDRFCGCLLNV 328
D ++N+
Sbjct: 327 RAKCKFDHYTYNIMINI 343
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I P+A F+ LI G + ++ EM G +PN+I+Y +++ + +
Sbjct: 156 KLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTS 215
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++K+M NG PN TY++++ + + R D + EM E+G+ +V YN+++
Sbjct: 216 MAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIV 275
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
++G +EA +F++M + P++ TF+ ++ G VSEA +F M E G
Sbjct: 276 HGFCNLGQLNEATRLFKEM-VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGV 334
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
EP++ +L+ Y + ++ + + G P L+N
Sbjct: 335 EPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILIN 381
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 3/236 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN F+ +++ + G + +++EM V PN +T+ L+D + + + +
Sbjct: 264 IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEAR 323
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ MT+ G+ P+ +TY +L+ Y R + V+ M KG YN L+
Sbjct: 324 LVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGY 383
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
DEA + +M + PD+ T+S+++ G+ EA +F EM G PN
Sbjct: 384 CKSRRMDEAKSLLAEM-YHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPN 442
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
L L+ + K D+ ++ L + E + P+ L+ M K E+ K
Sbjct: 443 LVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAK 498
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
++++ LI Y + D ++ EM + P+ +TY+ L+ + + RP + ++KE
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G PN TY LL + + + ++ L + + MKEK ++ ++ Y L+ G
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ A E+F + + +PD T++ MI G EA +F +M + GF PN
Sbjct: 494 LEVAKELFSKL-FGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYN 552
Query: 289 SLIQCYGKAQRTDDVVRALNRL 310
+IQ + + Q + +R ++ +
Sbjct: 553 VMIQGFLQNQDSSTAIRLIDEM 574
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+E M GV+P++ TYN L+D + + K +++ M G +P ++Y L+ Y
Sbjct: 325 VFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYC 384
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
++R ++ S+ EM K + Y+TL+ +G EA +F++M S P+
Sbjct: 385 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM-CSYGPHPNL 443
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
T+ ++ G + EA + M E EPN+ T LI+ A + + ++
Sbjct: 444 VTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSK 503
Query: 310 LPELGITPDDR 320
L G PD R
Sbjct: 504 LFGDGTRPDIR 514
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V+E M G P +YN L++ +++R + K++ EM L+P+ TY++L++
Sbjct: 360 VFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC 419
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+ ++ L++++EM G ++ Y LL G+ DEA ++ + MK + +P+
Sbjct: 420 QLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK-LEPNI 478
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++ +I GK+ A+ +F+++ G P++ T +I+ K +D+ +
Sbjct: 479 VHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRK 538
Query: 310 LPELGITPDDRFCGCLLNVMTQ 331
+ + G P+ C NVM Q
Sbjct: 539 MEDDGFLPN----SCSYNVMIQ 556
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 103/219 (47%), Gaps = 7/219 (3%)
Query: 105 RIDPNA----FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
RI+P F + + + +++ +M V N+ + N L++ + R
Sbjct: 86 RINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVD 145
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
++ +M G+ P+ T+ +L+ ++ + ++ EM ++G + +V Y T++
Sbjct: 146 FSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVI 205
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAG 279
G T A ++F+ M+ + C+P+ T+S++I ++C R V++A +EM+E G
Sbjct: 206 NGLCKTGNTSMAVDVFKKMEQN-GCKPNVVTYSTIIDSLCKDR-LVNDAMEFLSEMVERG 263
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN+F S++ + + ++ R + + P+
Sbjct: 264 IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPN 302
>gi|298711207|emb|CBJ32428.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 870
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ L++L G G + L + M+ G+ PN YN++ + R +R + ++++M
Sbjct: 148 YNVLLRLCGLGGCWATGLELMGMMEDEGITPNPYHYNSMFMALERGERWREAAELFRKMR 207
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G PN TYA L+ R + +V +EM + + S YN LL CA +
Sbjct: 208 ACGTRPNALTYAPLIGVMDRCNKQDMAGAVLKEMLRESPRDSTREYNLLLNACAKARKWE 267
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A +FEDMK +PD+ T++++I G+V EA + M E G P++ +L
Sbjct: 268 HAQLVFEDMKKKAGVKPDNVTYNTVINALGRCGRVKEATVHLHAMKEQGLSPDVVTFGTL 327
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLN 327
I ++ + + + L G+ P+ + + GC+++
Sbjct: 328 IHACAQSAKREPALALFAELVSRGLKPNLEAYKGCIVS 365
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 130 VYEEMKA-IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
V+E+MK GVKP+ +TYN +++ +GR R + M + GLSP+ T+ +L+ A
Sbjct: 272 VFEDMKKKAGVKPDNVTYNTVINALGRCGRVKEATVHLHAMKEQGLSPDVVTFGTLIHAC 331
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
++ E L+++ E+ +G++ ++ Y + C G+ + ++F M ++ + D
Sbjct: 332 AQSAKREPALALFAELVSRGLKPNLEAYKGCIVSCHKTGHYQQGLDLFNRM-LADKVRMD 390
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
F++ I C+ AM +EM E P+ + S I KAQ++ + L
Sbjct: 391 RVVFNTAIACCAQLKLWRRGVAMLDEMRERKVAPDQYSYNSAIYGCVKAQQSQQMTMVLA 450
Query: 309 RLPELGITPD 318
R+ E G PD
Sbjct: 451 RMREDGFDPD 460
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 2/212 (0%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN A+ I G++ L+++ M A V+ + + +N + + K +
Sbjct: 352 LKPNLEAYKGCIVSCHKTGHYQQGLDLFNRMLADKVRMDRVVFNTAIACCAQLKLWRRGV 411
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EM + ++P+ +Y S + +A+ + V M+E G V Y+ L+
Sbjct: 412 AMLDEMRERKVAPDQYSYNSAIYGCVKAQQSQQMTMVLARMREDGFDPDVWTYSNLIRCL 471
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
AD A I +DM QPD+ F++ + CS G+ +EAE + M G P+
Sbjct: 472 ADSMLWRRAVGILDDMLLEGRVQPDAHCFNAAVRACSKVGEWAEAERLVTGMRGQGLAPD 531
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ SLI YG + + + L + G
Sbjct: 532 KYTYNSLIYAYGNSGEWEKALSMLEEIRAAGF 563
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIG-VKPNMITYNNLLDTMGR 155
R R + + D +S LI+ + + + + ++M G V+P+ +N + +
Sbjct: 450 ARMREDGFDPDVWTYSNLIRCLADSMLWRRAVGILDDMLLEGRVQPDAHCFNAAVRACSK 509
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+ + + M GL+P+ TY SL+ AYG + E LS+ E++ G +++
Sbjct: 510 VGEWAEAERLVTGMRGQGLAPDKYTYNSLIYAYGNSGEWEKALSMLEEIRAAGFKVNCMA 569
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
Y+ + C + A E+ + M +P+ + ++ ++ C
Sbjct: 570 YSAAIKACDKAFQWERALELLDRMVERGGVKPNLFAYNHAMSAC 613
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 83/231 (35%), Gaps = 28/231 (12%)
Query: 136 AIGVKPNMITYNNLLDTMGRAKRPWQVKT---IYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+G P TY L+ G+ ++ W K + +EM D L + Y + A R
Sbjct: 45 GVGWAPTEETYGLALEACGKVRKRWGFKAPLFLIQEMRDVNLEISLVHYRGAVTACALTR 104
Query: 193 YGEDTLSVYREMKEKGMQLSVT--------------------LYNTLLAMCADVGYTDEA 232
L + EM+++G+ V YN LL +C G
Sbjct: 105 QLSGVLPLLDEMRDRGVAADVVKRALGLVQMMRSEGLAPTAITYNVLLRLCGLGGCWATG 164
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
E+ M E P+ + ++SM + EA +F +M G PN LI
Sbjct: 165 LELM-GMMEDEGITPNPYHYNSMFMALERGERWREAAELFRKMRACGTRPNALTYAPLIG 223
Query: 293 CYGKAQRTDDVVRALNRLPELGITPDD--RFCGCLLNVMTQTPKEELGKLV 341
+ + D L + L +P D R LLN + K E +LV
Sbjct: 224 VMDRCNKQDMAGAVLKEM--LRESPRDSTREYNLLLNACAKARKWEHAQLV 272
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 43 KRSVSLQETQSSNPTKHSQNPQ-YPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARN 101
+R V+ Q P K++ N Y +G +G K+ S L+E R
Sbjct: 517 ERLVTGMRGQGLAPDKYTYNSLIYAYGNSGEWEKAL----------SMLEE------IRA 560
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM-KAIGVKPNMITYNNLLDTMGRAKRPW 160
++++ A+S IK A ++ L + + M + GVKPN+ YN+ + R P+
Sbjct: 561 AGFKVNCMAYSAAIKACDKAFQWERALELLDRMVERGGVKPNLFAYNHAMSACVRFSPPY 620
Query: 161 -QVKTIYKE-------------------MTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
+ K ++ E + + G+ +W + +LL A GR E+ +
Sbjct: 621 SRRKELHGEGGGQGAVSPTSFCVPANLPVFEAGIPGDWYSNHALLEALGRGGRWEEAVKT 680
Query: 201 YREMKEKGMQL-SVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+ + K + + T Y T+L +C G+ +A E ++M ++
Sbjct: 681 FEDKKRQADRPPEQTCYKTMLRVCERAGFACQAVEYLKEMPAA 723
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 94 SYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
++ A K PNA + TLIK G L+ ++++ A G + + ++Y L++
Sbjct: 115 AFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLIN 174
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ +A V + +++ + + P+ Y +++ + + D +Y EM KG+
Sbjct: 175 GLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISP 234
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+V Y TL+ +G EAF + +MK +N PD +TF+ +I + GK+ EA ++
Sbjct: 235 NVFTYTTLIHGFCIMGNLKEAFSLLNEMK-LKNINPDVYTFNILIDALAKEGKIDEAMSL 293
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F EM PN+ TSLI K + + ++ E GI P+
Sbjct: 294 FEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+ + + +++D ++ TLI AG + +++ VKP+++ Y ++ +
Sbjct: 153 FHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLC 212
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
+ K +Y EM G+SPN TY +L+ + ++ S+ EMK K + V
Sbjct: 213 KNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVY 272
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
+N L+ A G DEA +FE+MK +N P+ T++S+I + A A+ +
Sbjct: 273 TFNILIDALAKEGKIDEAMSLFEEMK-HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKK 331
Query: 275 MLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
M E G +PN++ T L+ K R ++ + L
Sbjct: 332 MKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHL 367
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P+ F+ LI G D ++++EEMK + PN++TY +L+D + + +
Sbjct: 267 INPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAI 326
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ K+M + G+ PN +Y LL A + E+ ++ + KG L+V YN ++
Sbjct: 327 ALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGL 386
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G + ++ M+ + C P++ TF ++I + + +AE EM+ G
Sbjct: 387 CKAGLFGDVMDLKSKME-GKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ M + P +NN+L ++ + KR V +++K+ NG++P+ T + L+ +
Sbjct: 49 FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+ SV+ + ++G + NTL+ G A F D ++ Q D
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALH-FHDKVVAQGFQLDQV 167
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEA-GFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++ ++I C+ ++A A LE +P+L + T++I C K + D +
Sbjct: 168 SYGTLIN-GLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSE 226
Query: 310 LPELGITPD 318
+ GI+P+
Sbjct: 227 MIVKGISPN 235
>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 733
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 1/224 (0%)
Query: 96 DTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
DTR + + +AF +LI YG AG + ++++MK +G+ + +Y+ L + R
Sbjct: 145 DTRGGVSRAAVTEDAFVSLIDSYGRAGIVQESVKLFKKMKELGLDRTVKSYDALFKVILR 204
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
R K Y M G+ P +T+ LL + + + Y +MK +G+ V
Sbjct: 205 RGRYMMAKRYYNAMLLEGVDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVT 264
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
YNTL+ DEA ++F +MK + P+ +F++M+ G++ +A +F EM
Sbjct: 265 YNTLINGYFRFKKVDEAEKLFVEMK-GRDIVPNVISFTTMLKGYVAAGRIDDALKVFEEM 323
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
G +PN+ ++L+ A++ + L + E I P D
Sbjct: 324 KGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKD 367
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 106 IDPNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+DP + I L+G + D + YE+MK+ G+ P+++TYN L++ R K+ + +
Sbjct: 223 VDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAE 282
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM + PN ++ ++L+ Y A +D L V+ EMK G++ +V ++TLL
Sbjct: 283 KLFVEMKGRDIVPNVISFTTMLKGYVAAGRIDDALKVFEEMKGCGVKPNVVTFSTLLPGL 342
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEP 282
D EA ++ +M D+ F M++ C C+ G + A + M+
Sbjct: 343 CDAEKMAEARDVLGEMVERYIAPKDNALFMKMMS-CQCKAGDLDAAADVLKAMVRLSIPT 401
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
LI+ + KA D + L++L E
Sbjct: 402 EAGHYGVLIESFCKANVYDKAEKLLDKLIE 431
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D AF+ LI+ + GN D + + M GV ++ +Y L+++ R P KT
Sbjct: 479 DSVAFNNLIRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTAL 538
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M ++G P + Y S++ + + V + M EKG + ++ L +L
Sbjct: 539 DGMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGAKENMDLVLKILEALLLR 598
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ +EA D+ C+PD F ++++ + K A + + +LE + +
Sbjct: 599 GHVEEALGRI-DLLMHNGCEPD---FDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSI 654
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ A +T + L ++ E G + D
Sbjct: 655 YDKVLDALLAAGKTLNAYSILCKILEKGGSTD 686
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 15/284 (5%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ + P F L++ + + + V +EM G +P+ + LLD + + +
Sbjct: 196 YMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAA 255
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGE--DTLSVYREMKEKGMQLSVTLYNTLLA 221
+++++M +PN + SLL YG R G+ + V ++KE G + + +YN LL
Sbjct: 256 SLFEDMRVR-FNPNLRHFTSLL--YGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLG 312
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
A G +AF++ +MK NC P++ +F+ +I K+ EA +F EM +G E
Sbjct: 313 GYAQAGKMRDAFDLLAEMKKV-NCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCE 371
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
++ T+LI + K TD L+ + + G P C++ M KEEL + +
Sbjct: 372 ADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIM--MAHEKKEELEECM 429
Query: 342 ECVEKSNSKLGYVVKLLLEEQDIE-----GDFKKEATELFNSIS 380
E +E+ K+G V L + I GD KEA L+ +
Sbjct: 430 ELIEEMR-KIGCVPDLNIYNTMIRLVCKLGDL-KEAVRLWGEMQ 471
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 111/251 (44%), Gaps = 3/251 (1%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDG 126
K G P Y++ K + + + R +PN F++L+ + G
Sbjct: 228 KYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIME 287
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+V ++K G +P+++ YNNLL +A + + EM PN ++ L++
Sbjct: 288 AKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQ 347
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
++ + ++ + ++ EM+ G + V Y TL++ G TD+A+EI +DM +
Sbjct: 348 SFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGH-D 406
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P ++ ++ + ++ E + EM + G P+L + ++I+ K + VR
Sbjct: 407 PSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRL 466
Query: 307 LNRLPELGITP 317
+ G+ P
Sbjct: 467 WGEMQAGGLNP 477
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 151/347 (43%), Gaps = 58/347 (16%)
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG---LS 175
G AGN V+ K G + + Y ++ T+G+ ++ V + +EM L+
Sbjct: 141 GDAGNLGYRFFVWAS-KQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLT 199
Query: 176 PNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFE 234
P + L+R + R + + V EM + G + ++ LL A+C + G EA
Sbjct: 200 PE--VFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN-GSVKEAAS 256
Query: 235 IFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY 294
+FEDM+ N P+ F+S++ GK+ EA+ + ++ EAGFEP++ V +L+ Y
Sbjct: 257 LFEDMRVRFN--PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGY 314
Query: 295 GKAQRTDDVVRALNRLPELGITPD--------DRFC------------------GCLLNV 328
+A + D L + ++ P+ FC GC +V
Sbjct: 315 AQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 374
Query: 329 MTQT-----------PKEELGKLVECVEKSN--SKLGYVVKLLLEEQDIEGDFKKEATEL 375
+T T + L + ++K + S+L Y+ ++ E KKE E
Sbjct: 375 VTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE-------KKEELEE 427
Query: 376 FNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQS 422
+ ++++K C+ DL + ++ CKL +L + ++ ++Q+
Sbjct: 428 CMELIEEMRKI--GCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQA 472
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 79/191 (41%), Gaps = 38/191 (19%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+A K+++ ++D A +K PNA F+ LI+ + D + ++ EM+ G + ++
Sbjct: 316 QAGKMRD-AFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADV 374
Query: 144 ITYNNLL-----------------DTMGRAKRPWQVK------------------TIYKE 168
+TY L+ D + + P Q+ + +E
Sbjct: 375 VTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEE 434
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G P+ N Y +++R + ++ + ++ EM+ G+ + Y ++ G
Sbjct: 435 MRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGC 494
Query: 229 TDEAFEIFEDM 239
EA + F++M
Sbjct: 495 LVEACDYFKEM 505
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 4/243 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+P+ F+ LI ++ GN D +Y+EM V PN +TYN++++ + R +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
K + M G PN TY +L+ + + R ++ + +++ M +G + YNTL+
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
VG A +IF M S PD T ++ G++ A F++M E+
Sbjct: 359 HGYCQVGKLRVALDIFCWM-VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGK 339
+ +I KA + + RLP G+ PD R + +L + P+ E +
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Query: 340 LVE 342
L+
Sbjct: 478 LIR 480
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 138/295 (46%), Gaps = 8/295 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++T+I + + L V+ M+ G++ + +TYN L+ + + R +
Sbjct: 707 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M + PN + +L+ + + + ++Y+EM + + +V YN+L+
Sbjct: 767 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 826
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A +F D+ S+ C PD T++++IT +V + +F EM G + F
Sbjct: 827 HGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
+LI Y +A + + + NR+ + G++PD LL+ + K E+ +VE +
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945
Query: 345 EKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKK----AYCNCLIDLC 395
+KS + + ++ + D KEA LF S+++ K AY + LC
Sbjct: 946 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1000
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +F+ LI + L+V +M +G +P+++T+ +LL R ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGE--DTLSVYREMKEKGMQLSVTLYNTLL-AMC 223
M +G PN Y +L+ G + GE L + EM++KG+ V YNTLL +C
Sbjct: 165 ILMVKSGYEPNVVVYNTLID--GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++D A + + MK S N PD TF+++I + +G + EA+ ++ EM+++ +PN
Sbjct: 223 YSGRWSDAARMLRDMMKRSIN--PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+I R D + + + G P+
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TLI +G + + +M + PN+I + L+DT + + +
Sbjct: 741 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 800
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+YKEM + PN TY SL+ + D ++ M KG V YNTL+
Sbjct: 801 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 860
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
++ ++F +M + + D++T++++I GK++ A+ +FN M++ G P++
Sbjct: 861 KSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 919
Query: 285 FVLTSLIQCY---GKAQRTDDVVRALNR 309
L+ C GK ++ +V L +
Sbjct: 920 VTYNILLDCLCNNGKIEKALVMVEDLQK 947
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+ +LI + G +++ M + G P+++TYN L+ ++KR
Sbjct: 810 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 869
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EMT GL + TY +L+ Y +A V+ M + G+ + YN LL
Sbjct: 870 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 929
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G ++A + ED++ SE D T++ +I K+ EA +F + G +P+
Sbjct: 930 CNNGKIEKALVMVEDLQKSE-MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 988
Query: 284 LFVLTSLIQ--CYGKAQRTDDVVRALNRLPELGITPDDR 320
++I C QR D + R+ E G P +R
Sbjct: 989 AIAYITMISGLCRKGLQREAD--KLCRRMKEDGFMPSER 1025
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 7/213 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +F+ LI + L + +M +G +P+++T +LL+ + R + ++
Sbjct: 638 DLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 697
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G PN Y +++ + R + L V+ M++KG++ YNTL++ ++
Sbjct: 698 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 757
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A + DM P+ F+++I G + EA ++ EM+ PN+F
Sbjct: 758 GRWTDAARLLRDM-VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 816
Query: 287 LTSLIQ------CYGKAQRTDDVVRALNRLPEL 313
SLI C G A+ D++ + P++
Sbjct: 817 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 849
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN ++TLI G + L + EM+ G+ +++TYN LL + + R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ ++M ++P+ T+ +L+ + + ++ +Y+EM + + + YN+++
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +A + F D+ +S+ C P+ T++++I+ C R V E +F M GF +
Sbjct: 293 MHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFR-MVDEGMKLFQRMSCEGFNAD 350
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F +LI Y + + + + +TPD
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ ++ + FD + +Y +M+ +G+ ++ ++ L+ R R + +M
Sbjct: 607 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 666
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYT 229
G P+ T SLL + + ++ +S+ M G +V +YNT++ +C +
Sbjct: 667 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD-L 725
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+ A E+F M+ + + D+ T++++I+ S G+ ++A + +M++ +PN+ T+
Sbjct: 726 NNALEVFYCME-KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784
Query: 290 LIQCYGK 296
LI + K
Sbjct: 785 LIDTFVK 791
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ L+ ++ + ++M+ G+ ++ ++ L+ R R ++ +M
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T+ SLL + D S+ M + G + +V +YNTL+ G +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ +M+ + D T+++++T G+ S+A M +M++ P++ T+L
Sbjct: 194 IALELLNEME-KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
I + K D+ + + + P++
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
F+ ++ EM P+++ + LL +R V ++M G+S + ++
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ + R LSV +M + G + S+ + +LL V +AF + M S
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS- 170
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+P+ ++++I G+++ A + NEM + G ++ +L+ + R D
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 304 VRALNRLPELGITPD 318
R L + + I PD
Sbjct: 231 ARMLRDMMKRSINPD 245
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
D+AF +F +M S P F+ ++T+ + K ++++M G +L+ T
Sbjct: 586 DDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 644
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSN 348
LI C+ + R + L ++ +LG P G LLN Q + +E LV+ S
Sbjct: 645 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD----SM 700
Query: 349 SKLGYVVKLLLEEQDIEGDFKKE----ATELFNSISKDVKKA 386
G+V +++ I G K A E+F + K +A
Sbjct: 701 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA 742
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 107/208 (51%), Gaps = 2/208 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R N ++ F++LI+ YG AG F + +++ MK +G+ P+++T+N+LL + +
Sbjct: 128 RRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRG 187
Query: 158 RPWQVKTIYKEMTDN-GLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
R ++ EM G++P+ T+ +L+ + + ++ ++++M+ V Y
Sbjct: 188 RTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTY 247
Query: 217 NTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
NT++ G A + M K + + P+ ++++++ + ++ EA +F++M
Sbjct: 248 NTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM 307
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
L G +PN +LI+ +A R D++
Sbjct: 308 LSRGLKPNAVTYNTLIKGLSEAHRYDEI 335
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
+D R D F+TLI + D ++++M+ P+++TYN ++D +
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 155 RAKRPWQVKTIYKEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
RA + + M + PN +Y +L+R Y + ++ + V+ +M +G++ +
Sbjct: 256 RAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN 315
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSS-ENCQPDSWTFSSMITICSCRGKVSEAEAM 271
YNTL+ ++ DE +I + PD+ TF+ +I G + A +
Sbjct: 316 AVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKV 375
Query: 272 FNEMLEAGFEPN 283
F EML P+
Sbjct: 376 FQEMLNMKLHPD 387
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN +++TL++ Y D + V+ +M + G+KPN +TYN L+ + A R ++K
Sbjct: 277 VHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIK 336
Query: 164 TIYKEMTD--NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
I D +P+ T+ L++A+ A + + + V++EM + Y+ L+
Sbjct: 337 DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396
Query: 222 MCADVGYTDEAFEIFEDMKSSE------NCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
D A +F ++ E C+P + ++ M GK +AE +F ++
Sbjct: 397 TLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456
Query: 276 LEAGFE 281
++ G +
Sbjct: 457 MKRGVQ 462
>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D ++ +++ G + V EM A+G+ N TY L+D GRA R V
Sbjct: 90 KLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWA 149
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ EM+ +G P+ Y+ ++ Y + + + RE++E G+ L +YN+++
Sbjct: 150 VIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFG 209
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA E+FE M+ E +PD T++S+I G V +A +F++M E G P+
Sbjct: 210 KCGELSEALEVFEKMQ-EEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDP 268
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ ++I G+ + D + R + G L+++ Q
Sbjct: 269 KIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQ 315
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++++I +G G L V+E+M+ GVKP+++T+N+L+ +A + +
Sbjct: 196 LDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALEL 255
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + GL P+ + +++ G + + MK +G Q S +Y L+ +
Sbjct: 256 FSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQ 315
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G E +K SE QP + F + + +G + + M G EPNL
Sbjct: 316 YGRFQGPEECISALK-SEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLI 374
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L LI +G A R + + + + + GI+PD
Sbjct: 375 MLNMLINAFGIAGRHLEALSVYHHIKDTGISPD 407
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 1/226 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+++T+I+ G+ G ++ EM +G+K ++ YN +L + R + E
Sbjct: 59 GSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAE 118
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY +L+ YGRA D +V EM G +Y+ ++ + D G
Sbjct: 119 MDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGM 178
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+A EI +++ D ++S+I G++SEA +F +M E G +P++
Sbjct: 179 WKKAMEIVREIREM-GVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWN 237
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
SLIQ + KA + +++ E G+ PD + +++ + + K
Sbjct: 238 SLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQGK 283
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
DP F T+I G G +D +E MK G + + Y L+D G+ R +
Sbjct: 267 DPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRFQGPEECI 326
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G+ P+ + + L AY + E T+ V + M+ +G++ ++ + N L+
Sbjct: 327 SALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIA 386
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA ++ +K + PD T+S+++ C K + ++ EM AG P+
Sbjct: 387 GRHLEALSVYHHIKDT-GISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPD 442
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ YN + R + + +M G S + +Y +++ A G + +++RE
Sbjct: 24 VVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFRE 83
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M G++L + +YN +L C G + A ++ +M + + T+ +++ G
Sbjct: 84 MVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDAL-GIGRNRATYEALVDYYGRAG 142
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDR 320
++++ A+ EM GF P+ FV + +I Y G ++ ++VR + E+G++ D R
Sbjct: 143 RLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIR---EMGVSLDKR 199
Query: 321 FCGCLLNVMTQTPKEELGKLVECVEK 346
+++ + EL + +E EK
Sbjct: 200 IYNSIIDTFGKCG--ELSEALEVFEK 223
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 36/150 (24%)
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+ E G +LS +YN + VG D+A ++ M++ +++++I G
Sbjct: 14 ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEAL-GFSLSLGSYTTVIEALGSVG 72
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLT----------------------------------- 288
+ EAEA+F EM+ G + +L V
Sbjct: 73 RTLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYE 132
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ YG+A R +DV + + G PD
Sbjct: 133 ALVDYYGRAGRLNDVWAVIGEMSRDGFGPD 162
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 3/194 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN F+ LI +G GN + +YE+M +G P+++T+ +L+D R Q
Sbjct: 316 IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGL 375
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM LSPN TYA L+ A + + + R +K + +YN ++
Sbjct: 376 KLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G DEA I +M+ + C+PD TF+ +I +G++ EA + F +M+E P+
Sbjct: 436 CKAGKVDEANFIVAEMQEKK-CRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPD 494
Query: 284 LFVLTSLIQCYGKA 297
+ SLI C KA
Sbjct: 495 EITINSLISCLLKA 508
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + L+ Y G D N E+ G+K + YNNLL+ + + + ++
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLF 202
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+E + P+ ++ L+R R + ++ M G + YNTL+ V
Sbjct: 203 REHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRV 262
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+ ++ ++ + PD T++S+I+ G + A +F+EM+ +G +PN F
Sbjct: 263 NEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFT 322
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI +GK + ++ LG PD
Sbjct: 323 FNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 2/212 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
N + L++ G D V++ M++ G+ P+ L+ + R + K E
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ G+ + Y +LL + ++ + ++RE E V +N L+ +G
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE-MLEAGFEPNLFVL 287
D+AFE F++M + C PD +++++I ++S+ + E ML G P++
Sbjct: 230 IDKAFEFFQNM-GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
TS+I Y K + + GI P+D
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPND 320
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Query: 166 YKEMTDNGLSPN--WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ E + LS N +NTY L+R + + V+ M+ G+ ++ L++
Sbjct: 95 FFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSY 154
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A +G D A ++ + + +++++ + + V EA +F E LE F P+
Sbjct: 155 ARMGKLDSAKNFLNEVHCY-GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPD 213
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ LI+ + D + G PD
Sbjct: 214 VYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPD 248
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ + A D V M+ GV P+ ITYN+L+ R + ++
Sbjct: 44 DVVTYNTLLAAHCRASGLDAGFAVLHRMREAGVSPDAITYNSLIAGAARRGLTMRALDLF 103
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G++P+ +Y +L+ R+ + ED V+ +M EKG+ T YNTLL
Sbjct: 104 DEMLQAGVAPDAWSYNALMHCLFRSGHPEDAYRVFADMAEKGVAPCATTYNTLLDGLFRF 163
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G+ A+ +F ++ + T+++MI GKV A + E+ PN+
Sbjct: 164 GHATNAYRMFRYLQRT-GLPVGIVTYNTMINGLCKSGKVGYARMVLRELGRTEHAPNVVT 222
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD-DRFCGCLLNVMTQTPKEELGKLVECVE 345
T++++C K R D + L E G PD +C + ++ + EE E +
Sbjct: 223 YTTVMKCCFKYGRFDQGLETFLSLLEGGYIPDLFPYCTVISALVKKGRMEEANTYSELMI 282
Query: 346 KSNSKL 351
+S +L
Sbjct: 283 RSGFRL 288
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 147/361 (40%), Gaps = 70/361 (19%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RAS L + + R + + P+A +++LI G L++++EM GV P+
Sbjct: 57 RASGL-DAGFAVLHRMREAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDA 115
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+YN L+ + R+ P ++ +M + G++P TY +LL R + + ++R
Sbjct: 116 WSYNALMHCLFRSGHPEDAYRVFADMAEKGVAPCATTYNTLLDGLFRFGHATNAYRMFRY 175
Query: 204 MKEKGMQLSVTLYNTLL-AMC--ADVGYT------------------------------- 229
++ G+ + + YNT++ +C VGY
Sbjct: 176 LQRTGLPVGIVTYNTMINGLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCCFKYGR 235
Query: 230 -DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D+ E F + PD + + ++I+ +G++ EA M+ +GF +
Sbjct: 236 FDQGLETFLSLLEGGYI-PDLFPYCTVISALVKKGRMEEANTYSELMIRSGFRLDSACYN 294
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
+LI K + DD L+ + E G+ D+ L+N + + E ++
Sbjct: 295 TLIYLRCKEGKLDDAFELLSMMEEGGLESDEYTFSILVNGLCKMGH---------FEAAH 345
Query: 349 SKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLL 408
+L Y +E +D+E N I AY NCL+D + ++ A KLL
Sbjct: 346 KQLCY-----MEIRDMES----------NVI------AY-NCLVDALCKSDEVDAAIKLL 383
Query: 409 E 409
Sbjct: 384 H 384
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L + R + +++ + G+ P+ TY +LL A+ RA + +V M+E
Sbjct: 14 NVCLAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRMRE 73
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ YN+L+A A G T A ++F++M + PD+W++++++ G
Sbjct: 74 AGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQA-GVAPDAWSYNALMHCLFRSGHPE 132
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQC---YGKAQRTDDVVRALNR 309
+A +F +M E G P +L+ +G A + R L R
Sbjct: 133 DAYRVFADMAEKGVAPCATTYNTLLDGLFRFGHATNAYRMFRYLQR 178
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 79/200 (39%), Gaps = 1/200 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I +G V E+ PN++TY ++ + R Q + +
Sbjct: 188 YNTMINGLCKSGKVGYARMVLRELGRTEHAPNVVTYTTVMKCCFKYGRFDQGLETFLSLL 247
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G P+ Y +++ A + E+ + M G +L YNTL+ + G D
Sbjct: 248 EGGYIPDLFPYCTVISALVKKGRMEEANTYSELMIRSGFRLDSACYNTLIYLRCKEGKLD 307
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+AFE+ M+ + D +TFS ++ G A M E N+ L
Sbjct: 308 DAFELLSMMEEG-GLESDEYTFSILVNGLCKMGHFEAAHKQLCYMEIRDMESNVIAYNCL 366
Query: 291 IQCYGKAQRTDDVVRALNRL 310
+ K+ D ++ L+ +
Sbjct: 367 VDALCKSDEVDAAIKLLHNM 386
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 36/265 (13%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ E+ R F +I + AG L+V++ M+ G P + T+N L+ + ++
Sbjct: 578 QKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQM 637
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ I EM G+SPN +TY +++ Y + +++++G+QL V Y L
Sbjct: 638 EKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEAL 697
Query: 220 LAMCADVGYTDEAFEIFEDMKSSEN----------------------------------- 244
L C G A + ++M S++N
Sbjct: 698 LKACCKSGRMQSALAVTKEM-SAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGG 756
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+PD T++S I C G + A M EM +G +PN+ T+LI + +A + +
Sbjct: 757 VKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKAL 816
Query: 305 RALNRLPELGITPDDRFCGCLLNVM 329
R + G+ PD CL+ +
Sbjct: 817 RCFQEMKLAGLKPDKAVYHCLMTAL 841
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + T++ Y GN + CL V+E +K G P++++Y L++ + + + + K
Sbjct: 447 DIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKM 506
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY+ L+ + + + + +++ ++ + G++ V LYN ++ +G
Sbjct: 507 MESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGT 566
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A + ++M+ E +P S TF +I + G++ A +F+ M +G P +
Sbjct: 567 MDRAICMVKEMQ-KERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFN 625
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + ++ + + L+ + G++P++
Sbjct: 626 ALILGLVEKRQMEKAIEILDEMALAGVSPNE 656
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 10/225 (4%)
Query: 123 NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYA 182
N+ ++ +E +K KP+ Y ++ R + + ++ M G+ P + Y
Sbjct: 290 NWQDVVSAFERIK----KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYT 345
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
SL+ AY R E+ LS R+MKE+G+++S+ Y+ ++ A +G D A F++ K
Sbjct: 346 SLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAK-D 404
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ ++ + +MI + +AEA+ EM G + + + +++ Y +
Sbjct: 405 RHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEK 464
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKS 347
+ RL E G P GCL+N+ + +GK+ + +E S
Sbjct: 465 CLTVFERLKECGFAPSVVSYGCLINLYAK-----VGKISKALEVS 504
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 7/212 (3%)
Query: 95 YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMG 154
Y T+ R+E ++D + L+K +G L V +EM A + N YN L+D
Sbjct: 678 YFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWA 737
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R W+ + ++M G+ P+ +TY S + A +A + EM+ G++ +V
Sbjct: 738 RRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVK 797
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE----- 269
Y TL+ A ++A F++MK + +PD + ++T R V+EA
Sbjct: 798 TYTTLIHGWARASLPEKALRCFQEMKLA-GLKPDKAVYHCLMTALLSRATVTEAYVRPGI 856
Query: 270 -AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
++ EM+E+G ++ + K +RT
Sbjct: 857 LSICKEMIESGLIVDMGTAVHWSKSLRKIERT 888
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++ LI LY G L V + M++ G+K NM TY+ L++ + K I++++
Sbjct: 483 SYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDV 542
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+GL P+ Y +++RA+ + + + +EM+++ + + + ++ A G
Sbjct: 543 VKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEM 602
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A ++F+ M+ S C P TF+++I + ++ +A + +EM AG PN T+
Sbjct: 603 KRALDVFDMMRRS-GCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTT 661
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ Y T +L + G+ D
Sbjct: 662 IMHGYAALGDTGKAFEYFTKLRDEGLQLD 690
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 98 RARNEKWRIDP--NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
RAR I+P + +++LI Y + + L+ +MK GV+ +++TY+ ++ +
Sbjct: 333 RARG----IEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAK 388
Query: 156 AKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTL 215
+KE D N Y +++ AY + + ++ REM+ +G+ + +
Sbjct: 389 IGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDI 448
Query: 216 YNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
Y+T++ VG ++ +FE +K P ++ +I + + GK+S+A + M
Sbjct: 449 YHTMMDGYTMVGNEEKCLTVFERLKEC-GFAPSVVSYGCLINLYAKVGKISKALEVSKMM 507
Query: 276 LEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCG 323
AG + N+ + LI + K + + + + G+ PD FCG
Sbjct: 508 ESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCG 563
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI N + ++ + M A GVK +++TYN L+D + +A R + + + + M
Sbjct: 155 FNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214
Query: 171 DNGLSPNWNTYASLLRAYGRARYGE--DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+G +P+ Y+S + YG + G+ + V +M++ +V YNT+L G
Sbjct: 215 ASGCAPDVVAYSSFV--YGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK 272
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
D A E+ E M SS+ C + +S+++ G+ EA ++ M AG P++ +
Sbjct: 273 IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS 332
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ KA + ++ V A+ + G P+
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 10/241 (4%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A +L+E + R + D A+S+ + +G V E+M+ PN++
Sbjct: 199 KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVV 258
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
TYN +LD + ++ + + ++M + +G N Y++++ + ++ SV
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCR 262
M G + V Y++L+ G +EA E +M + E C+P++ T+ S++ +CSC
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM-AMEGCKPNAVTYCSLVHGLCSC- 376
Query: 263 GKVSEAEAMFNEMLEAGFE-----PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G+++EAE M EM G P++ +LI KA R DD ++ R+ G P
Sbjct: 377 GRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436
Query: 318 D 318
D
Sbjct: 437 D 437
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 112/217 (51%), Gaps = 9/217 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN+ F+ L+ + G C + E M A G++PN+++YN LL+ + + +R + + +
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 166 YKEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA-M 222
++M G +P+ TY++LL Y +A E++ + +E+ +G++ +Y ++A +
Sbjct: 68 VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE-AEAMFNEMLEAGFE 281
C + + E +++ C P TF+++I+ C CR K E A+++ M +G +
Sbjct: 128 CKSARLGEALELLEEMIRA--GCCPTLITFNTLISGC-CREKNLEMADSLLQTMAASGVK 184
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ +L+ KA R + + L R+ G PD
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 112/239 (46%), Gaps = 9/239 (3%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
+E D +R + D +STL+ Y AG + + +E+ + G++P+ + Y ++
Sbjct: 65 EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
++ ++ R + + +EM G P T+ +L+ R + E S+ + M G++
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
V YNTL+ G EA ++ E MK+S C PD +SS + GKV A
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS-GCAPDVVAYSSFVYGLCKSGKVLNAHQ 243
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
+ +M ++ +PN+ +++ K+ + D + + ++ + D GC LNV+
Sbjct: 244 VLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA----SSD----GCGLNVV 294
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVK 163
DPN ++T++ +G D L + E+M + G N++ Y+ ++D + + R + +
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + M G P+ TY+SL+ +A E+ + REM +G + + Y +L+
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373
Query: 224 ADVGYTDEAFEIFEDM----KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
G EA + E+M ++C P T++++I G++ +A F M G
Sbjct: 374 CSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQG 433
Query: 280 FEPNLFVLTSLIQCYGKAQRT 300
+P+ +++++ ++ R
Sbjct: 434 CDPDGVSYSTIVEGLARSGRA 454
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A ++ ++ +ST++ G +V E M G +P+++TY++L++ + +A +
Sbjct: 284 ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL-----SV 213
+ +EM G PN TY SL+ + + EM G SV
Sbjct: 344 IEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSV 403
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+ YN L+ G D+A + F+ M+S + C PD ++S+++
Sbjct: 404 STYNALIGGLCKAGRIDDALKFFQRMRS-QGCDPDGVSYSTIV 445
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 97/194 (50%), Gaps = 3/194 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN F+ LI +G GN + +YE+M +G P+++T+ +L+D R Q
Sbjct: 316 IKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGL 375
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM LSPN TYA L+ A + + + R +K + +YN ++
Sbjct: 376 KLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGF 435
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G DEA I +M+ + C+PD TF+ +I +G++ EA + F +M+E P+
Sbjct: 436 CKAGKVDEANFIVAEMQEKK-CRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPD 494
Query: 284 LFVLTSLIQCYGKA 297
+ SLI C KA
Sbjct: 495 EITINSLISCLLKA 508
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + L+ Y G D N E+ G+K + YNNLL+ + + + ++
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLF 202
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+E + P+ ++ L+R R + ++ M G + YNTL+ V
Sbjct: 203 REHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRV 262
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+ ++ ++ + PD T++S+I+ G + A +F+EM+ +G +PN F
Sbjct: 263 NEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFT 322
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI +GK + ++ LG PD
Sbjct: 323 FNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPD 354
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 2/212 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
N + L++ G D V++ M++ G+ P+ L+ + R + K E
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
+ G+ + Y +LL + ++ + ++RE E V +N L+ +G
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE-MLEAGFEPNLFVL 287
D+AFE F++M + C PD +++++I ++S+ + E ML G P++
Sbjct: 230 IDKAFEFFQNM-GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
TS+I Y K + + GI P+D
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPND 320
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Query: 166 YKEMTDNGLSPN--WNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ E + LS N +NTY L+R + + V+ M+ G+ ++ L++
Sbjct: 95 FFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSY 154
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
A +G D A ++ + + +++++ + + V EA +F E LE F P+
Sbjct: 155 ARMGKLDSAKNFLNEVHCY-GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPD 213
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ LI+ + D + G PD
Sbjct: 214 VYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPD 248
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 115/233 (49%), Gaps = 1/233 (0%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
R K + KS +R D +++++ Y G + L++ EMK+ GV PNM+T
Sbjct: 563 RLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVT 622
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
YN L+ + + +V ++ EM G P + LL+AY R+R + L +++++
Sbjct: 623 YNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLV 682
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+ G+ L+ +YNTL+ + +G T +A + +M + D T++++I V
Sbjct: 683 DMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEM-VIKGISADIVTYNALIRGYCTGSHV 741
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A +++ML +G PN+ +L++ D + ++ + E G+ P+
Sbjct: 742 EKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPN 794
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 4/227 (1%)
Query: 93 KSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K+ + + + I PN F + L+ Y G + Y+EMK+ G++ N I ++ LL
Sbjct: 429 KAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILL 488
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ + R+ + +++ K++ G+ + Y+SL+ Y + LSV +EM EK MQ
Sbjct: 489 NNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQ 548
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
V YN L +G E +F M PD T++S++ +GK A
Sbjct: 549 FDVVAYNALTKGLLRLG-KYEPKSVFSRM-IELGLTPDCVTYNSVMNTYFIQGKTENALD 606
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
+ NEM G PN+ LI K + V+ L+ + +G P
Sbjct: 607 LLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVP 653
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI+ Y T + + N Y +M G+ PN+ TYN LL+ + +
Sbjct: 724 DIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLV 783
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + GL PN TY L+ +GR D++ +Y EM KG + YN L+ A
Sbjct: 784 SEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKA 843
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC-----SCRGKV---------SEAEAMF 272
G +A E+ +M + P+S T+ + IC SC+ ++ +EA+ +
Sbjct: 844 GKMRQARELLNEMLTRGRI-PNSSTYD--VLICGWCKLSCQPEMDRLLKLSYQNEAKKLL 900
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
EM E G P+ L + + + DD R L
Sbjct: 901 REMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLL 935
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 6/221 (2%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P L+K Y + D L +++++ +G+ N + YN L+ + R + +
Sbjct: 655 PIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLT 714
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM G+S + TY +L+R Y + E + Y +M G+ ++T YN LL + G
Sbjct: 715 EMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNG 774
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A ++ +M+ P++ T++ +++ G ++ ++ EM+ GF P
Sbjct: 775 LMRDADKLVSEMRE-RGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTY 833
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITP-----DDRFCG 323
LIQ Y KA + LN + G P D CG
Sbjct: 834 NVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICG 874
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y D ++YE+M GV P+++T +++L + R + + + +EM
Sbjct: 239 WTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMY 298
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ GL PN +Y +++ A ++ + + +M +G+ + + L T++ G +
Sbjct: 299 NMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSK 358
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA E+F+ + N P+ T+++++ G V AE + +M + PN+ +S+
Sbjct: 359 EAEEMFQTILKL-NLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSI 417
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
I Y K + V L ++ ++ I P+ LL+ +T + E
Sbjct: 418 INGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHE 463
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ EK + PN FS++I Y G + + V +M + + PN+ Y LLD R
Sbjct: 401 KMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTG 460
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ YKEM GL N + LL R+ ++ S+ +++ KG+ L V Y+
Sbjct: 461 QHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYS 520
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+L+ G A + ++M + ++ Q D ++++ GK E +++F+ M+E
Sbjct: 521 SLMDGYFKEGNESAALSVVQEM-TEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFSRMIE 578
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G P+ S++ Y +T++ + LN + G+ P+
Sbjct: 579 LGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPN 619
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +TL+ Y G L++ E+ GVKP+++TYN L++ + + +++
Sbjct: 143 LDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESV 202
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
E+ L + + +L G + D L + +Q +V + TL+A
Sbjct: 203 VNEI----LGFRRDDESGVLNDCGVETW--DGL--------RDLQPTVVTWTTLIAAYCK 248
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
D+ F ++E M S PD T SS++ GK++EA + EM G +PN
Sbjct: 249 HRGIDDFFSLYEQMIMS-GVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHV 307
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
T++I K+ R + +++ GI+ D C +++ + + K +
Sbjct: 308 SYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSK 358
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 94/208 (45%), Gaps = 4/208 (1%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
R KL E + R +DPN +++T+I +G N +M G+ ++
Sbjct: 283 RHGKLTEAAMLLREM-YNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDL 341
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ ++D + +A + + + +++ + L PN TY +LL + + E +V ++
Sbjct: 342 VLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQK 401
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M+++ + +V +++++ A G ++A E+ M N P+ + ++ ++ G
Sbjct: 402 MEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKM-VQMNIMPNVFVYAILLDGYFRTG 460
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
+ A + EM G E N + L+
Sbjct: 461 QHEAAAGFYKEMKSWGLEENNIIFDILL 488
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 58/251 (23%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTM----------------------------GRAKRPW- 160
+Y EM GV PN+ + N L+ ++ G KR
Sbjct: 32 LYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHVTYNTVVWGFCKRGLA 91
Query: 161 -QVKTIYKEMTDNGLSPNWNTYASLLRAY---GRARYGEDTLSVYREMKEKGMQLSVTLY 216
Q + EM G+ + T L++ Y G +Y E + + G+ L
Sbjct: 92 DQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMG---NLVGGGVPLDAIGL 148
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML 276
NTL+ +VG A ++ ED +PD T+++++ RG +++AE++ NE+L
Sbjct: 149 NTLVDGYCEVGLVSRALDLVED-GWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEIL 207
Query: 277 ------EAG---------------FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
E+G +P + T+LI Y K + DD ++ G+
Sbjct: 208 GFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGV 267
Query: 316 TPDDRFCGCLL 326
PD C +L
Sbjct: 268 MPDVVTCSSIL 278
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 12/228 (5%)
Query: 107 DPNAFSTLIKLYGTAG---NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
DP ++ +I + + FD ++ + M V N+ T N L+ G +
Sbjct: 132 DPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCL 191
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
+ K+ L N TY LL+AY R+R VY E++ G +L + YN LL A+
Sbjct: 192 RLVKKW---DLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL 248
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
D ++A ++FEDMK +C+ D +T++ MI GK EA +FNEM+ G
Sbjct: 249 AKD----EKACQVFEDMKK-RHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTL 303
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMT 330
N+ +L+Q K + D ++ +R+ E G P++ LLN++
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLV 351
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 131/279 (46%), Gaps = 16/279 (5%)
Query: 69 KTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCL 128
+TG P Y + + ++ + D K + +S L++ G+
Sbjct: 333 ETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAH 392
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
++ +M + VK +Y ++L+++ A + + + ++ + G+ + Y ++ A
Sbjct: 393 RLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSAL 452
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
G+ + ++ +MK+ G + YN L+A VG DEA IFE+++ S+ C+PD
Sbjct: 453 GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD-CKPD 511
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+++S+I G V EA F EM E G P++ ++L++C+GK +R + A +
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE---MAYS 568
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKS 347
E+ + GC N++T L++C+EK+
Sbjct: 569 LFEEMLVK------GCQPNIVTYNI------LLDCLEKN 595
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 89 KLKEKSY--DTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
KLK+ S+ D + +K P+ F+ LI +G G D +N++EE++ KP++I
Sbjct: 454 KLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDII 513
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
+YN+L++ +G+ + +KEM + GL+P+ TY++L+ +G+ E S++ EM
Sbjct: 514 SYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
KG Q ++ YN LL G T EA +++ MK + PDS T++ +
Sbjct: 574 LVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK-QQGLTPDSITYTVL 623
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+++ ++++ AG + + ++ GV + + YN + +G+ K+ + ++++
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M +G SP+ TY L+ ++GR ++ ++++ E++ + + YN+L+ G
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE---AMFNEMLEAGFEPNLF 285
DEA F++M+ + PD T+S T+ C GK E ++F EML G +PN+
Sbjct: 528 VDEAHVRFKEMQ-EKGLNPDVVTYS---TLMECFGKTERVEMAYSLFEEMLVKGCQPNIV 583
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ C K RT + V +++ + G+TPD
Sbjct: 584 TYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+ G +++E+MK G P++ TYN L+ + GR + I+
Sbjct: 441 DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+E+ + P+ +Y SL+ G+ ++ ++EM+EKG+ V Y+TL+
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+ A+ +FE+M + CQP+ T++ ++ G+ +EA ++++M + G P+
Sbjct: 561 ERVEMAYSLFEEM-LVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Query: 287 LTSL 290
T L
Sbjct: 620 YTVL 623
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 99/217 (45%), Gaps = 10/217 (4%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++ +I+ G G D + ++ EM G+ N++ YN L+ + + K +
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 165 IYKEMTDNGLSPNWNTYA---SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
++ M + G PN TY+ +LL A G+ + + + + +G +Y+ L+
Sbjct: 327 VFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVR 380
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
+ +G+ EA +F DM S + + ++ SM+ GK EA M +++ E G
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFP-VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVV 439
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + ++ GK ++ + ++ + G +PD
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPD 476
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STL++ +G + +++EEM G +PN++TYN LLD + + R + +Y
Sbjct: 546 DVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605
Query: 167 KEMTDNGLSPNWNTYASLLR----AYGRAR 192
+M GL+P+ TY L R ++G++R
Sbjct: 606 SKMKQQGLTPDSITYTVLERLQSVSHGKSR 635
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 118/228 (51%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI Y + + +Y EM +G +PN+ITY++LL + A + K ++
Sbjct: 329 DVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLF 388
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M +G++ N TY L + + + ++ E+K +L + N L+
Sbjct: 389 SVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKA 448
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A+E+FE + S+E +P+ T++ MI G+V +A + +M G P++
Sbjct: 449 GKLETAWELFEKL-SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 507
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
+L++ + ++ + ++VV+ L+R+ + ++PD C +++++++ K
Sbjct: 508 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 555
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 139/331 (41%), Gaps = 56/331 (16%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEM------KAIGVKPNMITYNNLLD 151
R +K P+ + TLIK GN + L +++EM I KPN+ITYN ++D
Sbjct: 164 RMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVD 223
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPN-------------WNTYASLLRAYGRARYGEDTL 198
+ + R + K +++EM G+ PN +N L G+ + L
Sbjct: 224 GLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLL 283
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
V M E G+ + YN+L+ VG + A E+F M S+ C+PD +++ +I
Sbjct: 284 GV---MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM-PSKGCEPDVISYNVLING 339
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S KV EA ++NEML G PN+ SL++ A + DD + + + GI +
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399
Query: 319 DRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNS 378
G L+ + + N L +KL E + +FK E L
Sbjct: 400 SYTYGIFLDGLCK----------------NDCLFEAMKLFTELKS--SNFKLEIENL--- 438
Query: 379 ISKDVKKAYCNCLIDLCVNLNLLENACKLLE 409
NCLID LE A +L E
Sbjct: 439 ----------NCLIDGLCKAGKLETAWELFE 459
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 109/286 (38%), Gaps = 52/286 (18%)
Query: 85 PRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDG--CLNVYEEMKAIGVKPN 142
P AS ++ + + + PN + GN L+ + M P+
Sbjct: 9 PSASSIRNSNLSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPS 68
Query: 143 MITYNNLLDTMGRAKRPWQVKTIYKEMTDNGL---------------------------- 174
+ ++N+LL + + K QV ++Y +M +GL
Sbjct: 69 LSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFA 128
Query: 175 -------SPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
SPN TY +L++ + ++ M++ G V Y TL+ G
Sbjct: 129 GILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTG 188
Query: 228 YTDEAFEIFEDM-----KSSENCQPDSWTFSSMITICSCRGKVSEAEAMF---------- 272
+ A ++ ++M + NC+P+ T++ ++ G+ EA+ +F
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP 248
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
NEML+ G +P++ LI K + + + L + E GI PD
Sbjct: 249 NEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD 294
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
T ++ ++++ + LI AG + ++E++ G +PN++TY ++ R
Sbjct: 424 TELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCRE 483
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
+ + + ++M NG +P+ TY +L+R + + E+ + + M +K
Sbjct: 484 GQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK 534
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ +I+ + G + V++ MK G+ P+ +Y+ L+D + + + EM
Sbjct: 284 FNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMA 343
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
NG++P +Y+SLL RA E ++R ++E+G + +Y+ +L C +
Sbjct: 344 RNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIE 403
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEPNLFVLTS 289
+++ DM N PD++ ++S+I CR + +++A +F ML++G PN+ T
Sbjct: 404 VVCDLWNDM-VHHNFVPDAYNYTSLIY-AFCRHRNLTDALGVFELMLDSGVSPNVVTCTI 461
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
L+ +GK + D+ L+++ + GI P+
Sbjct: 462 LVDGFGKERMIDEAFLFLHKVRQFGIVPN 490
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI + N L V+E M GV PN++T L+D G+ + +
Sbjct: 420 DAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFL 479
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ G+ PN Y ++ + + ++ +M ++G +Y+ ++
Sbjct: 480 HKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKA 539
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EAF +F M E +P+ +T++S+I ++ E +F M+ G P+ +
Sbjct: 540 LKLPEAFRLFHKML-DEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRIL 598
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
TSLI CY K + + +LG++ D CL+
Sbjct: 599 YTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIG 639
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + ++ D +S ++ N + +++ +M P+ Y +L+ R +
Sbjct: 376 RLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHR 435
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+++ M D+G+SPN T L+ +G+ R ++ ++++ G+ ++ +Y
Sbjct: 436 NLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYR 495
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
++ V +D + IF DM PD+ +S +I K+ EA +F++ML+
Sbjct: 496 VIINGLCKVNKSDHVWGIFADM-IKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLD 554
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G +PN+F TSLI R +VV + G+TPD
Sbjct: 555 EGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPD 595
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S +I + A ++ +M G KPN+ TY +L++ + R +V T++
Sbjct: 525 DTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLF 584
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K M GL+P+ Y SL+ Y + + L ++R M + G+ LY L+ + V
Sbjct: 585 KHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKV 644
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D A + E+M +++ P T++++I G +A +N ML+AG P+
Sbjct: 645 LAMDGAQCLMEEM-TNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 4/241 (1%)
Query: 89 KLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
++ ++++ + ++ I PN + +I D ++ +M G P+ + Y
Sbjct: 470 RMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVY 529
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+ ++D+ +A + + ++ +M D G PN TY SL+ + +++++ M
Sbjct: 530 SIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIW 589
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+G+ LY +L+ A EIF M D++ ++ +I S +
Sbjct: 590 EGLTPDRILYTSLIVCYCKRSNMKAALEIFRGM-GKLGLSADAFLYTCLIGGFSKVLAMD 648
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
A+ + EM G P++ T+LI Y K N + + GITPD + C+L
Sbjct: 649 GAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKL-SCIL 707
Query: 327 N 327
Sbjct: 708 G 708
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT--IYKEMTDNGLSPNWNTYASLLR 186
+++++MK+ G PN+ +Y+ L+ R + + + EM G+ PN TY + L
Sbjct: 195 SLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLY 254
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
R R + + + ++G + +N ++ G EA E+F+ MK
Sbjct: 255 GLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKG-GLV 313
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
PD+ ++S ++ +G V + EM G P L +SL+ +A + +
Sbjct: 314 PDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFEL 373
Query: 307 LNRLPELGITPDDRFCGCLLNVMTQ 331
RL E G D +LN Q
Sbjct: 374 FRRLEEQGFKHDHIVYSIILNGCCQ 398
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
YA+++R + ED L Y E K+ G++L L N LL + A +F+D
Sbjct: 142 QVYATIIRIFVELSMFEDALLTYTEAKKVGVELQ--LCNFLLKCLVERNQIIYARSLFDD 199
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEA--MFNEMLEAGFEPNLFVLTSLIQCYGK 296
MKSS P+ +++S +++ + ++ AEA + +EM G +PN + + YG
Sbjct: 200 MKSSGP-SPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYL--YGL 256
Query: 297 AQRTDDVVRALNRLPEL 313
+ RT V A N L L
Sbjct: 257 S-RTRQVASAWNFLQML 272
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 36/259 (13%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI Y G D + E MK V PN+IT+N+LL + + ++ + +++ KEM
Sbjct: 249 YNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEME 308
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS------------------ 212
NG P+ TY+ L R G + +Y + EKG++++
Sbjct: 309 VNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVE 368
Query: 213 -----------------VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+YNT + +G ++A E M+S +P+S TF+S+
Sbjct: 369 KAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF-GLRPNSITFNSL 427
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I ++ +AE +M E G P++ +LI YGK D + L ++ E+G+
Sbjct: 428 IDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGV 487
Query: 316 TPDDRFCGCLLNVMTQTPK 334
P+ G L+N + + K
Sbjct: 488 KPNVVSYGSLINCLCKDGK 506
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 37/243 (15%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI YG FD C + E+M+ IGVKPN+++Y +L++ + + + + + + ++M
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMI 518
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE------------------------ 206
G+ PN Y L+ +D L + EM
Sbjct: 519 CRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLT 578
Query: 207 -----------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
G V YN+L++ A+ G + ++E MK+ +P T+ +
Sbjct: 579 EAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNL-GIKPTVRTYHPL 637
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I+ CS G + E ++NEML+ P+ V ++I CY + T + + GI
Sbjct: 638 ISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGI 696
Query: 316 TPD 318
PD
Sbjct: 697 HPD 699
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T + Y G+ + + E M++ G++PN IT+N+L+D K + +
Sbjct: 385 DEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWV 444
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
K+M + G++P+ TY +L+ YG+ + + +M+E G++ +V Y +L+ +C D
Sbjct: 445 KKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKD 504
Query: 226 ----------------------------------VGYTDEAFEIFEDMKSSENCQPDSWT 251
VG +A F++M SE P T
Sbjct: 505 GKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE-ISPTLVT 563
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++ +I +GK++EAE ++ +G P++ SLI Y A + +
Sbjct: 564 YNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMK 623
Query: 312 ELGITPDDR 320
LGI P R
Sbjct: 624 NLGIKPTVR 632
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 4/212 (1%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++ LI G L ++EM + P ++TYN L+D + + + + +
Sbjct: 524 PNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDF 583
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++T +G SP+ TY SL+ Y A L +Y MK G++ +V Y+ L++ C+
Sbjct: 584 LTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK 643
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G E E + N PD +++MI + G +A ++ ML+ G P+
Sbjct: 644 EGI--ELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKM 701
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
SLI + + + ++ +N + + P
Sbjct: 702 TYNSLILGHFREGKLSNIKDLVNNMKAKELAP 733
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ-VKTI 165
D +++LI Y AGN CL +YE MK +G+KP + TY+ L+ G +K + V+ +
Sbjct: 595 DVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLIS--GCSKEGIELVEKL 652
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y EM L P+ Y +++ Y + S+++ M ++G+ YN+L+
Sbjct: 653 YNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFR 712
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G ++ +MK+ E P + T+ ++ S A + EM+E F PN
Sbjct: 713 EGKLSNIKDLVNNMKAKE-LAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771
Query: 286 V---LTSLIQCYGKAQRTDDVVRALN 308
+ LT+ ++ G+ Q + +N
Sbjct: 772 ICNELTAGLEQEGRLQEVQVICSEMN 797
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 105/265 (39%), Gaps = 44/265 (16%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N +R D ++ I+ N + + M+ GV+PN+ YN L+ + R KR
Sbjct: 169 NSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIR 228
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ EM + L + TY +L+ Y + + + MKEK + ++ +N+LL
Sbjct: 229 DAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLL 288
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSC------------------ 261
+ + EA + ++M+ + PD +T+S + + C
Sbjct: 289 SGLCKMRKMKEARSLLKEMEVN-GFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGI 347
Query: 262 ----------------RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
+GKV +AE + + E G + + + + Y + + +
Sbjct: 348 RINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAIL 407
Query: 306 ALNRLPELGITPD--------DRFC 322
+ R+ G+ P+ D+FC
Sbjct: 408 TIERMESFGLRPNSITFNSLIDKFC 432
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
F ++++ E++ G + + Y + + + M G+ PN Y
Sbjct: 157 FVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNV 216
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ R + D ++ EM + S+ YNTL+ VG D AF++ E MK +
Sbjct: 217 LIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKE-K 275
Query: 244 NCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ P+ TF+S+++ +C R K+ EA ++ EM GF P+ + + L + +
Sbjct: 276 SVAPNIITFNSLLSGLCKMR-KMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNG 334
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ + E GI ++ LLN + + K E
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVE 368
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 35/244 (14%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+F L++ + AG LNV++ M +G +P++ + N LL+ + ++ P +Y +M
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+ P+ T A + +AY R + EM+ G+++++ Y+ ++ +G+T
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269
Query: 230 DEAFEIFE-----------------------------------DMKSSENCQPDSWTFSS 254
++A I E +MK + + D +
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
MI RG++ +A + NEM +AG NLFV ++I K R ++V + L + ++G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 315 ITPD 318
+ PD
Sbjct: 390 MRPD 393
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 108/212 (50%), Gaps = 9/212 (4%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
KS RN+++ D +S+LI +G+ D ++ + M + G+ PN+ITYN+L+
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ ++ + + ++ ++ G+SPN TY +L+ Y + + + ++M E+G+Q +
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPT 839
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V Y+ L+ GY +EA ++ + M + N P+ T+ ++I G + E ++
Sbjct: 840 VITYSILIYGLCTQGYMEEAIKLLDQMIEN-NVDPNYITYCTLIHGYIKSGNMEEISKLY 898
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+EM G P ++ G +R+D VV
Sbjct: 899 DEMHIRGLLPTNWI--------GNWKRSDPVV 922
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D A+ +I Y G D V EM+ G+ N+ YN +++ + + R +V+ +
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM D G+ P+ +Y +L+ Y R + R M G+ + YNTLL
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ D+A ++ M P+ + S+++ GK +A ++ E L G N+
Sbjct: 442 LHAIDDALRLWFLML-KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVI 500
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++I K R + L+R+ EL PD
Sbjct: 501 TFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 39/267 (14%)
Query: 108 PNAFSTLI--KLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
P+ F+ I K Y G + EEM+ +G++ N++ Y+ ++D + I
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275
Query: 166 YKEMTDNGLSPNWNTYASLLRAY---GR---------------------ARYG------- 194
+ + GLSPN TY L++ Y GR YG
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335
Query: 195 -----EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
+D V EM++ G+ +++ +YNT++ +G +E ++ ++M+ +PD
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV-GMRPDK 394
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
++++++I G + +A M M+ G +L++ + DD +R
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEE 336
+ + G+ P++ C LL+ + + K E
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTE 481
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 103 KWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K + PN S TL+ AG + LN+++E A G+ N+IT+N +++ + + R
Sbjct: 457 KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMA 516
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + + M + P+ TY +L Y + + +M+ G SV ++N+ +
Sbjct: 517 EAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ +I +M S+ P+ T+ ++I G + EA ++ EM+ G
Sbjct: 577 TGHFIAKQWHKVNDIHSEM-SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
PN+F+ ++L+ C+ K + D+ L +L + + P
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 1/222 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +++TLI Y G+ + M G+ +TYN LL
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ M G++PN + ++LL +A E L++++E +G+ +V +NT++
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G EA E+ + MK C PDS T+ ++ G++ A + N+M GF P++
Sbjct: 511 KIGRMAEAEELLDRMKELR-CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+ S I + A++ V + + G++P+ G L+
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
+++E ++ P+ TY++L+ + + ++ M GL+PN TY SL+ Y
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI--Y 778
Query: 189 GRARYGE--DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
G + G+ ++++ +++ KG+ + YNTL+ G T EAF++ + M E Q
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM-VEEGIQ 837
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P T+S +I +G + EA + ++M+E +PN +LI Y K+ +++ +
Sbjct: 838 PTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 897
Query: 307 LNRLPELGITPDD 319
+ + G+ P +
Sbjct: 898 YDEMHIRGLLPTN 910
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 127/320 (39%), Gaps = 36/320 (11%)
Query: 92 EKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
K D + + PN + LI + GN N+Y EM G+ PN+ + L
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPN-----------------------------WNT 180
+ + + + + +++ + + P WN
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNV 705
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
L GR D S++ ++ K Y++L+ CA G DEAF + D+
Sbjct: 706 IIFGLCKSGRI---ADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL-RDVM 761
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
S P+ T++S+I GK+S A +FN++ G PN +LI Y K +T
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821
Query: 301 DDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECVEKSNSKLGYVVKLLL 359
+ + ++ E GI P L+ + TQ EE KL++ + ++N Y+ L
Sbjct: 822 TEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTL 881
Query: 360 EEQDIEGDFKKEATELFNSI 379
I+ +E ++L++ +
Sbjct: 882 IHGYIKSGNMEEISKLYDEM 901
>gi|302755642|ref|XP_002961245.1| hypothetical protein SELMODRAFT_70140 [Selaginella moellendorffii]
gi|300172184|gb|EFJ38784.1| hypothetical protein SELMODRAFT_70140 [Selaginella moellendorffii]
Length = 489
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 114/223 (51%), Gaps = 8/223 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S +I++ GT GN+ +++EM+ G+KP+++T NN++ G A R ++
Sbjct: 32 DAMNYSMMIRVLGTCGNYTQGRKLFDEMREKGLKPDLVTVNNMIKCYGSANRMDDAMDLF 91
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA-- 224
+E D G P+ TYA L+ G+A + ++ E++ + ++ ++N+++A +
Sbjct: 92 REFPDFGFEPDVCTYALLIDLLGKAGRVSEVRKLFLELQSRKLKPDEYVFNSMIANFSKW 151
Query: 225 -DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
D+G DEA D +P + T++ ++ + + AE ++ E L + P+
Sbjct: 152 KDLGLADEAL----DYMKVCGIRPSTVTYAIVLNMYAKSLNFMLAEKIYCEYLNSNLPPD 207
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
L+V + I +G A R + A+ + + G+ P D+F C +
Sbjct: 208 LYVYNNAILFFGLAGRCREAEWAVEDIEKAGLVP-DKFSYCTI 249
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/434 (19%), Positives = 168/434 (38%), Gaps = 45/434 (10%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + + D + +IK YG+A D ++++ E G +P++ TY L+D +G+A R
Sbjct: 60 REKGLKPDLVTVNNMIKCYGSANRMDDAMDLFREFPDFGFEPDVCTYALLIDLLGKAGRV 119
Query: 160 WQVKTIYKEMTDNGLSPN-------------WN----------------------TYASL 184
+V+ ++ E+ L P+ W TYA +
Sbjct: 120 SEVRKLFLELQSRKLKPDEYVFNSMIANFSKWKDLGLADEALDYMKVCGIRPSTVTYAIV 179
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
L Y ++ +Y E + + +YN + G EA ED++ +
Sbjct: 180 LNMYAKSLNFMLAEKIYCEYLNSNLPPDLYVYNNAILFFGLAGRCREAEWAVEDIEKA-G 238
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
PD +++ ++I+ + +G +A+ F++ G P+ + +LI Y KA + V
Sbjct: 239 LVPDKFSYCTIISAWARQGCAPDAKKWFDKARSRGITPSPEMCNALIDAYIKALDLEPVA 298
Query: 305 RALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDI 364
L+ +P G+ + L N + KE + L + + K+ ++ +L +
Sbjct: 299 GILDAMPGWGVKATLQTYTYLFNYYCECCKEYVDLLRDYMRKTGHPADKFLEDVLGGKVP 358
Query: 365 EGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSR- 423
+ ++ + F+S+ + + + + D V+ T + R
Sbjct: 359 LQELRRVSQRFFDSLRLE-RSGWASKFADALVHYLQTYGYEAEAHEIFAAAAATRLFRRN 417
Query: 424 ----SPTQWSLHLKSLSLGAALTAL-HIWINDLSKALESGEEFPPLLGINTGHGKHKYSD 478
+ W + L + G AL L + K P + + TG GKH+ +
Sbjct: 418 LWENANDHWFIWLVDMDEGTALVGLKQGLLISREKLRNEPARRPAMATVVTGFGKHRETR 477
Query: 479 KGLASVFESHLKEL 492
LA S L+EL
Sbjct: 478 SALA--VRSALEEL 489
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 232 AFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
A E F KS + D+ +S MI + G ++ +F+EM E G +P+L + ++I
Sbjct: 16 ALEFFTWAKSVPFFKHDAMNYSMMIRVLGTCGNYTQGRKLFDEMREKGLKPDLVTVNNMI 75
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
+CYG A R DD + P+ G PD
Sbjct: 76 KCYGSANRMDDAMDLFREFPDFGFEPD 102
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
Y+ ++R G ++ EM+EKG++ + N ++ D+A ++F +
Sbjct: 36 YSMMIRVLGTCGNYTQGRKLFDEMREKGLKPDLVTVNNMIKCYGSANRMDDAMDLFREFP 95
Query: 241 SSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT 300
+PD T++ +I + G+VSE +F E+ +P+ +V S+I + K +
Sbjct: 96 DF-GFEPDVCTYALLIDLLGKAGRVSEVRKLFLELQSRKLKPDEYVFNSMIANFSKWKDL 154
Query: 301 DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKL 351
AL+ + GI P +LN+ ++ L + + C E NS L
Sbjct: 155 GLADEALDYMKVCGIRPSTVTYAIVLNMYAKSLNFMLAEKIYC-EYLNSNL 204
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 123/253 (48%), Gaps = 9/253 (3%)
Query: 80 VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAI 137
V S A+ K ++ D + PN F+ +++ Y ++G + + ++ +M +
Sbjct: 47 VTYNSIIAALSKAQAMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSD 106
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G++P+++TYN+L+D + + + + + I+ M GL P+ TY +LL Y +
Sbjct: 107 GIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM 166
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ M + GMQL ++N L+ DE +F M+ + P++ + ++I
Sbjct: 167 HDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMR-QQGLTPNAVNYRTVID 225
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQC---YGKAQRTDDVVRALNRLPELG 314
G++ +A F +M++ G PN+ V TSLI Y K ++ ++++ + + G
Sbjct: 226 GLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIF---EILDQG 282
Query: 315 ITPDDRFCGCLLN 327
I P+ F +L+
Sbjct: 283 INPNIVFFNTILD 295
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++D + F+ LI Y D + V+ +M+ G+ PN + Y ++D + + R
Sbjct: 178 MQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAM 237
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++M D GL+PN Y SL+ A E + E+ ++G+ ++ +NT+L
Sbjct: 238 LNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSL 297
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G E+ ++F D+ PD T+S++I GK+ A + M+ G +P+
Sbjct: 298 CKEGRVIESKKLF-DLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPD 356
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++LI Y K R +D + + G+ PD
Sbjct: 357 SVTYSTLINGYCKINRMEDALALFKEMESNGVNPD 391
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK---RPWQVK 163
D +++T+I G+ D Y EM V P+ +TYN+++ + +A+ R +V
Sbjct: 10 DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
T+ + PN TY S++ Y + E + ++R+M G++ V YN+L+
Sbjct: 70 TVM-------VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA +IF+ M +PD T+ +++ + +G + E + M++ G + +
Sbjct: 123 CKNGKCTEARKIFDSM-VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V LI Y K ++ D+VV +++ + G+TP+
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPN 216
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI Y AG DG + + M ++G+KP+ +TY+ L++ + R ++
Sbjct: 321 DVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALF 380
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
KEM NG++P+ TY +L R R +Y + E G QL ++ YN +L
Sbjct: 381 KEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 121/263 (46%), Gaps = 8/263 (3%)
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
P T +S Y+ N K A K+ +D+ + + D + TL+ Y + G
Sbjct: 110 PDVVTYNSLMDYLCKNGKCTEARKI----FDSMVK-RGLKPDITTYGTLLHGYASKGALV 164
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
++ M G++ + +N L+ + ++ +V ++ +M GL+PN Y +++
Sbjct: 165 EMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVI 224
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSEN 244
+ +D + + +M +KG+ +V +Y +L+ A+C + IFE + N
Sbjct: 225 DGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGIN 284
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
P+ F++++ G+V E++ +F+ + G P++ ++LI Y A + D +
Sbjct: 285 --PNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAM 342
Query: 305 RALNRLPELGITPDDRFCGCLLN 327
+ L + +G+ PD L+N
Sbjct: 343 KLLTGMVSVGLKPDSVTYSTLIN 365
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI Y + L +++EM++ GV P++ITYN +L + R +R K +Y
Sbjct: 356 DSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELY 415
Query: 167 KEMTDNGLSPNWNTYASLLRAYGR 190
+T++G +TY +L + +
Sbjct: 416 ARITESGTQLELSTYNIILMDFAK 439
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 124/250 (49%), Gaps = 16/250 (6%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A++T+I + G+ + ++++EM G+ P+++TY++++ + +A+ + +
Sbjct: 222 DVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFL 281
Query: 167 KEMTDNGLSP-NWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M + G+ P NW TY +L+ Y ++ + V++EM+ + V N L+
Sbjct: 282 RQMVNKGVLPDNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK 340
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA ++F+ M + + PD +++ M+ + +G + + +F+ ML G P+++
Sbjct: 341 YGKIKEARDVFDTM-AMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 399
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKE----ELGKLV 341
+ LI+ Y D + N + + G+ PD V+T T +GK+
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPD---------VVTYTTVIAALCRIGKMD 450
Query: 342 ECVEKSNSKL 351
+ +EK N +
Sbjct: 451 DAMEKFNQMI 460
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 12/246 (4%)
Query: 88 SKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCL----NVYEEMKAIGVKP 141
K+KE +DT A + +P+ FS I L G A GCL ++++ M G+ P
Sbjct: 342 GKIKEARDVFDTMAMKGQ---NPDVFSYKIMLNGYATK--GCLVDMTDLFDLMLGDGIAP 396
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
++ T++ L+ + I+ EM D+G+ P+ TY +++ A R +D + +
Sbjct: 397 DIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKF 456
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
+M ++G+ Y+ L+ G +A E+ ++ ++ + D FSS+I
Sbjct: 457 NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNN-GMRLDIVFFSSIINNLCK 515
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G++ +A+ +F+ + G P+ V + L+ Y + + +R + + GI P+
Sbjct: 516 LGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 575
Query: 322 CGCLLN 327
G L+N
Sbjct: 576 YGTLVN 581
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN + TL+ Y G D L+++ EM G+KP+ I YN ++D + A R K
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK 628
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ EMT++G++ N TY +LR + + R ++ + +++E++ +++ + NT++A
Sbjct: 629 VKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 688
Query: 224 ADVGYTDEAFEIFEDMKSS 242
+EA ++F + S
Sbjct: 689 FQTRRVEEAKDLFASISRS 707
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 4/250 (1%)
Query: 71 GSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
G +P Y + + S LK K N R+D FS++I G
Sbjct: 463 GVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDA 522
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
N+++ +G P+ + Y+ L+D + + ++ M G+ PN Y +L+
Sbjct: 523 QNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNG 582
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
Y + ++ LS++REM +KG++ S LYN ++ G T A F +M S
Sbjct: 583 YCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTES-GIAI 641
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
+ T++ ++ EA +F E+ + ++ L ++I + +R ++
Sbjct: 642 NKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 701
Query: 308 NRLPELGITP 317
+ G+ P
Sbjct: 702 ASISRSGLVP 711
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D A+ LI+ + T G+ + E+ G++ +++ ++++++ + + R + I+
Sbjct: 467 DKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF 526
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ G P+ Y+ L+ Y E L V+ M G++ +V +Y TL+ +
Sbjct: 527 DLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKI 586
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DE +F +M + +P + ++ +I G+ A+ F+EM E+G N
Sbjct: 587 GRIDEGLSLFREM-LQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCT 645
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+++ + K + D+ + L + + D ++ M QT + E K
Sbjct: 646 YNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 698
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
LSP +TYA L+ RA E L+ + ++ G+++ + + N LL + TDEA
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF--EPNLFVLTSLI 291
+I C PD +++S ++ +GK +A+ + M E G P++ T++I
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230
Query: 292 QCYGKAQRTDDVVRALNRLPELGITPD 318
C+ K + + + GI PD
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPD 257
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
+ P TY L+D RA RP + ++ GL + LL+ + A+ ++ L
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170
Query: 199 SVY-REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMI 256
+ E G V Y+ LL D G + +A ++ M + C PD ++++I
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
G V++A +F EM++ G P+L +S++ KA+ L ++ G+
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290
Query: 317 PDD 319
PD+
Sbjct: 291 PDN 293
>gi|15219527|ref|NP_177512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169780|sp|Q9C9U0.1|PP118_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g73710
gi|12324197|gb|AAG52063.1|AC012679_1 hypothetical protein; 49134-52109 [Arabidopsis thaliana]
gi|332197379|gb|AEE35500.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 991
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 42/276 (15%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++ +IK YG A + L++++ MK G P+ TYN+L + + +
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGR-----------------------ARYG------- 194
I EM D+G P TYA+++ +Y R YG
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 195 -----EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
E+ + +R M+E G+Q + + +L+ + VG +EA +++ MK SE PD
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEG-GPDV 690
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+SM+++C+ G VSEAE++FN + E G ++ +++ Y D+ +
Sbjct: 691 AASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEE 749
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVE 345
+ E G+ D C VM + G+L EC E
Sbjct: 750 MRESGLLSD---CTSFNQVMACYAAD--GQLSECCE 780
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 6/227 (2%)
Query: 97 TRARNEKWRID----PNAFSTLIKLYGTAGNFDGCLNV-YEEMKAIGVKPNMITYNNLLD 151
+A E++++D + +I +Y G + V Y + G + +++ YN ++
Sbjct: 464 AKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIK 523
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
G+AK + +++K M + G P+ TY SL + ++ + EM + G +
Sbjct: 524 AYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKP 583
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
Y ++A +G +A +++E M+ + +P+ + S+I + G V EA
Sbjct: 584 GCKTYAAMIASYVRLGLLSDAVDLYEAMEKT-GVKPNEVVYGSLINGFAESGMVEEAIQY 642
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F M E G + N VLTSLI+ Y K ++ R +++ + PD
Sbjct: 643 FRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 146/338 (43%), Gaps = 42/338 (12%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ L+ L+ AG+ + L Y +++ +G+ P+ +T+ +L + + K +V+ +
Sbjct: 374 DTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVI 433
Query: 167 KEMTDNGLSPNWNTYASLLRAYG------RAR-----------------------YGEDT 197
EM N + + ++ +++ Y +A+ Y E
Sbjct: 434 AEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKG 493
Query: 198 LSV------YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
L V Y + G + V YN ++ ++A +F+ MK+ + PD T
Sbjct: 494 LWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN-QGTWPDECT 552
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++S+ + + V EA+ + EML++G +P ++I Y + D V +
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612
Query: 312 ELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKK 370
+ G+ P++ G L+N ++ EE + +E+ + ++V L + + +
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 371 EATELFNSISKDVKK----AYCNCLIDLCVNLNLLENA 404
EA +++ + KD + A N ++ LC +L ++ A
Sbjct: 673 EARRVYDKM-KDSEGGPDVAASNSMLSLCADLGIVSEA 709
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 42/257 (16%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+TLI LYG AG + N++ EM GV + +T+N ++ T G + +++ K+M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL------AMCA 224
+ G+SP+ TY LL + A E L YR++++ G+ + +L M A
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 225 DV-----------------------------GYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+V G +A +FE + +C S T +++
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL--DCVLSSTTLAAV 485
Query: 256 ITICSCRGKVSEAEAMF-NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
I + + +G EAE +F + +G ++ +I+ YGKA+ + + + G
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 315 ITPDDRFCGCLLNVMTQ 331
PD+ C N + Q
Sbjct: 546 TWPDE----CTYNSLFQ 558
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 14/250 (5%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A EK D +F+T++ LY G D + V EEM+ G+ + ++N ++ +
Sbjct: 715 ALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQ 774
Query: 159 PWQVKTIYKEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLS----VYREMKEKGM-QLS 212
+ ++ EM + L +W T+ +L + + +S Y E K ++
Sbjct: 775 LSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAIT 834
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
TL++ + G A E +++ S E + + ++++I S G + A +
Sbjct: 835 ATLFSAM-------GLYAYALESCQELTSGE-IPREHFAYNAVIYTYSASGDIDMALKAY 886
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
M E G EP++ L+ YGKA + V R +RL + P + +
Sbjct: 887 MRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSA 946
Query: 333 PKEELGKLVE 342
+++L +V+
Sbjct: 947 NRQDLADVVK 956
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 131/321 (40%), Gaps = 43/321 (13%)
Query: 69 KTGSSPKSYIWVNPKSPRA-SKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFD 125
KTG P ++ + + A S + E++ E+ + N ++LIK Y G +
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
VY++MK P++ N++L + ++I+ + + G + + ++A+++
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMM 731
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y ++ + V EM+E G+ T +N ++A A G E E+F +M
Sbjct: 732 YLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKL 791
Query: 246 QPDSWTFSSMITICSCRGKVSEA----EAMFNEM-------------------------- 275
D TF ++ T+ G SEA + +NE
Sbjct: 792 LLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESC 851
Query: 276 --LEAGFEPN-LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
L +G P F ++I Y + D ++A R+ E G+ PD L+ + +
Sbjct: 852 QELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGK- 910
Query: 333 PKEELGKLVECVEKSNSKLGY 353
+VE V++ +S+L +
Sbjct: 911 -----AGMVEGVKRVHSRLTF 926
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 54/242 (22%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN+I YN +L +GRA + +++ + EM NG+ P NTY L+ YG+A ++ L
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFE---------DMKS---------- 241
+ M ++ T++ + + G D A F+ D+ S
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 242 ------------------SENCQPDSWTFSS-----------------MITICSCRGKVS 266
+ N S F+S +I + G+++
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+A +F+EML++G + ++I G + L ++ E GI+PD + LL
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 327 NV 328
++
Sbjct: 383 SL 384
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A++ +I Y +G+ D L Y M+ G++P+++T L+ G+A VK ++ +
Sbjct: 865 AYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T L P+ + + ++ AY A + V +EM
Sbjct: 925 TFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEM 959
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
I+ F+T+I Y D L + M+ +G++ ++ TYN L + RA R + K +
Sbjct: 316 INQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 375
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M + G+ PN +Y +L+ + + ++REM G + S+ YN ++
Sbjct: 376 LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 435
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA E F++ + PD +++++++ GKV A +F EM + G +PNL
Sbjct: 436 KGSIREA-ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLV 494
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
T+LI K R+++ + + + G+TPDD L+ + K+ +
Sbjct: 495 AYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNV 546
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S++I Y AGN V++E G++PN TY L++ + + + + +M
Sbjct: 251 YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQ 310
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ N + +++ Y R + L + M++ G++L V YNTL D
Sbjct: 311 VRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 370
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + M + +P+ +++++I+I G + EA +F EM G EP+L +
Sbjct: 371 EAKNLLRIM-IEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 429
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ Y K + R N + + G+ PD
Sbjct: 430 MDGYIKKGSIREAERFKNEMEKKGLVPD 457
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ P + S ++ Y +G + +EM GVK N + YN+LLD R K +V +
Sbjct: 141 VTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEM 200
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K M + G+ P TY L+ AR +V+ EMK K + V Y++++
Sbjct: 201 LKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCR 260
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A E+F++ + +P+ T+ ++I G++ AE + +M G N
Sbjct: 261 AGNVRRASEVFDECVGN-GIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQI 319
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V ++I Y + D + + ++GI D
Sbjct: 320 VFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 352
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+++ +++L+ Y + D + + M+ G++P + TY L+D + A+ +V+
Sbjct: 175 KVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA 234
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM LS + Y+S++ AY RA V+ E G++ + Y L+
Sbjct: 235 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 294
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G + A + DM+ + F++MI + V +A + M + G E ++
Sbjct: 295 KIGQMEAAEMLVTDMQ-VRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDV 353
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +L +A R D+ L + E G+ P+
Sbjct: 354 YTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 387
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 134/286 (46%), Gaps = 8/286 (2%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D +A ++++ AG +++ ++ G+ + I YN + +GR K+ +
Sbjct: 246 RGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYD 305
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y++M +G P+ TY L+ ++GRA + + ++ E++ + + YN+L+
Sbjct: 306 LYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLG 365
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G DEA F +M+ + PD T+S++I KV A +F+EML G PN+
Sbjct: 366 KNGDLDEAHIRFREMQ-EKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNI 424
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECV 344
L+ C ++ RT + V +L + G+TPD L + + + ++ V
Sbjct: 425 VTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYSVLERLQSGSHRKLR------V 478
Query: 345 EKSNSKLGYVVK-LLLEEQDIEGDFKKEATELFNSISKDVKKAYCN 389
+ N G+VV L + ++GD ++ N+ + + CN
Sbjct: 479 RRKNPITGWVVSPLRYFLKQLQGDIRRSLRPHGNTATPASRSKSCN 524
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Query: 102 EKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EKW + N ++ L++ Y + + D VY EMK G ++ +N LLD + + ++
Sbjct: 34 EKWDLKMNGYTYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKV 93
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
Q ++++M P+ TY ++R GR +++L+++ EM KG ++ YNT+
Sbjct: 94 DQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTM 153
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ A+ D+ +F M +NC+P+ +T+S ++T+ + G++ + + +
Sbjct: 154 IQALANSRMVDKTILLFSKM-MEKNCRPNEFTYSVILTLLAAEGQLHKLDKV 204
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 12/241 (4%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+ + + +D AF+ L+ D V+E+MK +P+ TY ++ GR +
Sbjct: 69 KRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKL 128
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++EM + G SPN Y ++++A +R + T+ ++ +M EK + + Y+ +
Sbjct: 129 DESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVI 188
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
L + A G + ++ E + N ++ ++ + G SEA +F M
Sbjct: 189 LTLLAAEGQLHKLDKVVELSRKYMN----RSIYAYLVRTLNKLGHASEAHRLFCNMWSYH 244
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
+ S+++ A +T + + L ++ E GI D +M T LG+
Sbjct: 245 DRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTD--------TIMYNTVFTALGR 296
Query: 340 L 340
L
Sbjct: 297 L 297
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N + D ++++LI G G+ D + EM+ G+ P+++TY+ L++ G+ +
Sbjct: 347 NSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVE 406
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
++ EM G PN TY LL R+ + + +Y ++K++G+ Y+ L
Sbjct: 407 MACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYSVL 465
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 13/231 (5%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW--QVK 163
P+ F+ LI + A LN+++ MK GVKP++ TYN+LL MG K+ +
Sbjct: 399 PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL--MGYCKKGCMDEAV 456
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
+Y EM G PN TY +L+R Y + ++ ++ EMK+ G+ + YN L+ +
Sbjct: 457 KLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGI 516
Query: 223 CADVGYTDEAFEIFEDMKS--SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
C D E+ +KS SE P T++S+I G + A ++ +M E G
Sbjct: 517 C----MVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
PN+ TS I Y + +D ++ LN + G+ PD L+N Q
Sbjct: 573 PPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQ 623
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E ++ + + TL++ Y +FD + +EMK GV N TYN L++ + R +
Sbjct: 465 EGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCE 524
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
V + K G P TY S++ + +A +VY++M+EKG+ ++ Y + +
Sbjct: 525 VDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFID 584
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G +D A ++ D++ QPD ++++I G +S A + +L+ G
Sbjct: 585 GYCRTGCSDMALKMLNDVR-RRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLA 643
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
PN V SLI Y +V + + + GI D
Sbjct: 644 PNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVAD 680
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM---GRAKRPWQV 162
PN +++ I Y G D L + +++ G++P+++ YN L++ G Q+
Sbjct: 574 PNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQL 633
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I + +GL+PN Y SL+ Y ++ Y M + G+ + Y TL+
Sbjct: 634 LVI---LLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG 690
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFE 281
+ G A E++ +M + + PD++TF++ +T CR G + A+ + EM
Sbjct: 691 FSKDGNVAFALELYSEMMA-KGYIPDAFTFTA-LTHGLCRSGDIDGAKKLLEEMRRLDVR 748
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
PN+F+ LI Y + + + R + + +GI PDD
Sbjct: 749 PNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDD 786
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
++EEM G+ P++ TYNNL+ +A + + ++ M G+ P+ NTY SLL Y
Sbjct: 389 LFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYC 447
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT-----DEAFEIFEDMKSSEN 244
+ ++ + +Y EM +G + +V Y TL+ GY D A+ + ++MK +
Sbjct: 448 KKGCMDEAVKLYSEMPMEGFKPNVVTYITLMR-----GYIAKKDFDNAYALLDEMKQN-G 501
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+ +T++ +I +V E + M + GF P + S+I + KA
Sbjct: 502 VSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAF 561
Query: 305 RALNRLPELGITPD 318
++ E G+ P+
Sbjct: 562 TVYQQMREKGLPPN 575
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 12/218 (5%)
Query: 106 IDPN------AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
IDP+ A + L KL G+ L + EMK +G TY ++D + + R
Sbjct: 223 IDPDQRVYALAITALCKL----GDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRM 278
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + EM D G + +L+R Y + + L++++E + G+ + +Y L
Sbjct: 279 EEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVL 338
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ C VG T +A+E+ M + + P ++ S ++ + +A +F EM ++G
Sbjct: 339 IRGCDQVGMTQKAYELCRQM-TGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG 397
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P++F +LI + +A + + + +R+ + G+ P
Sbjct: 398 L-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKP 434
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + ++TLI + GN L +Y EM A G P+ T+ L + R+ K +
Sbjct: 680 DTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLL 739
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM---- 222
+EM + PN Y L+ Y R ++ ++ EM G+Q T Y+ L++
Sbjct: 740 EEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLE 799
Query: 223 ---CADV 226
CADV
Sbjct: 800 ADNCADV 806
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 1/190 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L ++ EM+ G + + ++ L+ + ++ EM + P+ YA + A
Sbjct: 177 LALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITA 236
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ G L + REMKE G Y T++ + G +EA + ++M+ + +
Sbjct: 237 LCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGK-KM 295
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D ++++ R +V A +F E L+ G P + LI+ + T
Sbjct: 296 DVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELC 355
Query: 308 NRLPELGITP 317
++ G+ P
Sbjct: 356 RQMTGQGLLP 365
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 37/198 (18%)
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
P Y M G+ P+ + LL R +D L+++ EM+ +G ++
Sbjct: 138 PSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRV------- 190
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
D+W F ++++ C G +A +F+EM A
Sbjct: 191 -----------------------------DAWMFDALMSACLKEGMHEDAVRLFDEMPGA 221
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EEL 337
+P+ V I K +R L + E+G D +++V+ +T + EE
Sbjct: 222 EIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEA 281
Query: 338 GKLVECVEKSNSKLGYVV 355
++ + + + K+ +V
Sbjct: 282 LRVNDEMRDAGKKMDVIV 299
>gi|168032379|ref|XP_001768696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679988|gb|EDQ66428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 211
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+DP+ F++L++ YG G V +M+ G KP+ TY L+ + V+
Sbjct: 19 VDPDTLFFNSLVRGYGRMGYVHPASQVLFQMERYGAKPDPTTYERLMHLHAKKGHAELVE 78
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I+++M + G+ ++ +LL AY RA + LSV+RE K M+ S+ +N ++ C
Sbjct: 79 DIFQQMREAGVDAKCGSFDALLLAYCRAGKPDQALSVFREYK-LSMKPSLVAFNMIIDAC 137
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +EA +++ D+ +PD+ T++S+I+ G+ +A+ ++ ML G EP+
Sbjct: 138 GKAGRDEEAVQLYVDLIECRY-RPDTVTYTSLISAVVQAGRYEKADELYRRMLSDGVEPS 196
Query: 284 LFVLTSLIQ 292
++I
Sbjct: 197 GHTYATMIH 205
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
EM+++GV P+ + +N+L+ GR + +M G P+ TY L+ + +
Sbjct: 13 EMRSLGVDPDTLFFNSLVRGYGRMGYVHPASQVLFQMERYGAKPDPTTYERLMHLHAKKG 72
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
+ E ++++M+E G+ ++ LL G D+A +F + K S +P F
Sbjct: 73 HAELVEDIFQQMREAGVDAKCGSFDALLLAYCRAGKPDQALSVFREYKLS--MKPSLVAF 130
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
+ +I C G+ EA ++ +++E + P+ TSLI +A R + R+
Sbjct: 131 NMIIDACGKAGRDEEAVQLYVDLIECRYRPDTVTYTSLISAVVQAGRYEKADELYRRMLS 190
Query: 313 LGITP 317
G+ P
Sbjct: 191 DGVEP 195
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+F L+ Y AG D L+V+ E K + +KP+++ +N ++D G+A R + +Y +
Sbjct: 94 GSFDALLLAYCRAGKPDQALSVFREYK-LSMKPSLVAFNMIIDACGKAGRDEEAVQLYVD 152
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
+ + P+ TY SL+ A +A E +YR M G++ S Y T++ CA G
Sbjct: 153 LIECRYRPDTVTYTSLISAVVQAGRYEKADELYRRMLSDGVEPSGHTYATMIHACARRG 211
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R +V+ + EM G+ P+ + SL+R YGR Y V +M+ G + T Y
Sbjct: 3 REAEVEALILEMRSLGVDPDTLFFNSLVRGYGRMGYVHPASQVLFQMERYGAKPDPTTYE 62
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEML 276
L+ + A G+ + +IF+ M+ + +F +++ + CR GK +A ++F E
Sbjct: 63 RLMHLHAKKGHAELVEDIFQQMREA-GVDAKCGSFDALL-LAYCRAGKPDQALSVFRE-Y 119
Query: 277 EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+ +P+L +I GKA R ++ V+ L E PD L++ + Q + E
Sbjct: 120 KLSMKPSLVAFNMIIDACGKAGRDEEAVQLYVDLIECRYRPDTVTYTSLISAVVQAGRYE 179
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +F+T+I LY G + V E M+ GVK +++T+N+L+ + + +R + +
Sbjct: 305 LDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQL 364
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+EM G++P+ TY +L+ Y RA E+ + + EM+ GM V YN +L +
Sbjct: 365 LREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCE 424
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G E + +M Q D T +++I RG ++ A + M+E+G + + F
Sbjct: 425 DGKMKEVNVLLNEM-DERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQF 483
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ + KA+ D+ AL + G +P+
Sbjct: 484 TYKALVHGFCKAKELDEAKEALFEMMGAGFSPN 516
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L V++ M+A V P+ + LL + +++ + ++ +MT G++ N + Y ++L
Sbjct: 222 LRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHV 281
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+A S+ M G+ L +NT++A+ G EA + E M+ ++ +
Sbjct: 282 CLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERME-NQGVKA 340
Query: 248 DSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
D T++S+I +C R +V EA + EM AG P+ T+L+ Y +A ++ V+
Sbjct: 341 DVVTWNSLIHGLCKER-RVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKL 399
Query: 307 LNRLPELGITP 317
+ +G+ P
Sbjct: 400 RGEMEAMGMLP 410
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 7/215 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ Y AG+ + + + EM+A+G+ P + TYN +L + + +V +
Sbjct: 376 DHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLL 435
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + + + T +L+ AY + L V R M E G+QL Y L+
Sbjct: 436 NEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKA 495
Query: 227 GYTDEAFE-IFEDMKS--SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
DEA E +FE M + S N SW + C+ V+ A+ +E+++ GF P+
Sbjct: 496 KELDEAKEALFEMMGAGFSPNYSVLSWIVDGL---CNKNNAVA-VLAIPDELMKRGFPPD 551
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V SLI+ K D N + G+ D
Sbjct: 552 KAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEAD 586
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 99/233 (42%), Gaps = 2/233 (0%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
R + K +D R ++ + ++ ++ + AG+ ++ M A GV + +
Sbjct: 251 RMTATARKVFDQMTR-AGVAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFS 309
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+N ++ R ++ + + M + G+ + T+ SL+ + R ++ + REM
Sbjct: 310 FNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMA 369
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
G+ Y TL+ G +EA ++ +M++ P T+++++ GK+
Sbjct: 370 MAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAM-GMLPGVATYNAILRKLCEDGKM 428
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
E + NEM E + + +LI Y K ++ R+ E G+ D
Sbjct: 429 KEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLD 481
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K + D +TLI Y G+ L V M G++ + TY L+ +AK +
Sbjct: 441 RKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDE 500
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
K EM G SPN++ + ++ L++ E+ ++G +Y +L+
Sbjct: 501 AKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIR 560
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
G+ D A +F +M+ + + D ++++ GK A + NEM
Sbjct: 561 RLCKKGFIDLAGNVFNEMQ-GKGLEADCLVYATLACAYLTAGKPVAALDILNEM 613
Score = 45.1 bits (105), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 55/139 (39%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D + L+ + A D EM G PN + ++D + V
Sbjct: 479 QLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLA 538
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I E+ G P+ Y SL+R + + + +V+ EM+ KG++ +Y TL
Sbjct: 539 IPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYL 598
Query: 225 DVGYTDEAFEIFEDMKSSE 243
G A +I +M +
Sbjct: 599 TAGKPVAALDILNEMAKKQ 617
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 14/198 (7%)
Query: 103 KWRIDPNAFSTLIKLYG--TAGNFDGCLNVYEEMKAIGVKPNMITYN------NLLDTMG 154
K+ I P+ +S I ++G AG+ + L + +M+ G++P+M+TY +LL M
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMS 272
Query: 155 RAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
A+ + I K +TD GL P+ TY L+ + + E+ L + R++ G QL+V
Sbjct: 273 GAR-----EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVI 327
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE 274
LY+ LL+ G DEA ++ +M+++ N QPD T+S +I +GKV +A ++ E
Sbjct: 328 LYSVLLSSLCKRGQVDEALQLLYEMEAN-NLQPDLVTYSILIHGLCKQGKVQQAIQLYKE 386
Query: 275 MLEAGFEPNLFVLTSLIQ 292
M PN F + +++
Sbjct: 387 MCFNRIFPNSFAHSGILK 404
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++++ +S L+ G D L + EM+A ++P+++TY+ L+ + + + Q
Sbjct: 322 FQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAI 381
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+YKEM N + PN ++ +L+ D + + ++ VTLYN ++
Sbjct: 382 QLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGY 441
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEP 282
+G +EA +++ ++ + P TF+S+I C R KV EA + + G EP
Sbjct: 442 VKLGDVEEAVRLYKRLR-DKAITPSIVTFNSLIYGFCKNR-KVVEARRLLESIKLHGLEP 499
Query: 283 NLFVLTSLIQCY 294
+ T+L+ Y
Sbjct: 500 SAVTYTTLMNAY 511
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 102/209 (48%), Gaps = 6/209 (2%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
R D ++ +I Y G+ + + +Y+ ++ + P+++T+N+L+ + ++ + +
Sbjct: 427 LRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEAR 486
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ + + +GL P+ TY +L+ AY + EM K ++ +V Y ++
Sbjct: 487 RLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGL 546
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK-VSEAEAMFNEMLEAGFEP 282
+E+ ++ EDM+ ++ PD T++++I C C+ K + +A + ++ML EP
Sbjct: 547 CKQRKLEESVQLLEDMR-AKGLAPDQITYNTIIQ-CFCKAKDMRKAFELLDDMLIHNLEP 604
Query: 283 NLFVLTSLIQ--C-YGKAQRTDDVVRALN 308
LI C YG + D V+ +L
Sbjct: 605 TPATYNVLIDGLCRYGDVEDADRVLVSLQ 633
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 103/214 (48%), Gaps = 8/214 (3%)
Query: 105 RIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
RI PN+F S ++K G ++ + ++P++ YN ++D + +
Sbjct: 391 RIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEA 450
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+YK + D ++P+ T+ SL+ + + R + + +K G++ S Y TL+
Sbjct: 451 VRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFE 281
+ G ++ E+ +M + ++ +P T++ +I +C R K+ E+ + +M G
Sbjct: 511 YCEEGNINKLHELLLEM-NLKDIEPTVVTYTVVIKGLCKQR-KLEESVQLLEDMRAKGLA 568
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
P+ ++IQC+ KA+ D+ +A L ++ I
Sbjct: 569 PDQITYNTIIQCFCKAK---DMRKAFELLDDMLI 599
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+P ++ +IK + + + E+M+A G+ P+ ITYN ++ +AK +
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYG--EDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +M + L P TY L+ G RYG ED V ++++ + L+ Y T++
Sbjct: 592 ELLDDMLIHNLEPTPATYNVLID--GLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIK 649
Query: 222 MCADVGYTDEAFEIFEDM--KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
G A ++F M K E D +S++I R ++EA+ F ML G
Sbjct: 650 AHCVKGDAQRAVKVFHQMVEKGFEVSIKD---YSAVINRLCKRCLINEAKYYFCIMLSDG 706
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P+ + ++ + +A V L + + G+ D
Sbjct: 707 VSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 104/224 (46%), Gaps = 3/224 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
++P+A ++TL+ Y GN + + EM ++P ++TY ++ + + ++ +
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ ++M GL+P+ TY ++++ + +A+ + +M ++ + YN L+
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G ++A + ++ N +++MI +G A +F++M+E GFE +
Sbjct: 617 CRYGDVEDADRVLVSLQ-DRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVS 675
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ +++I K ++ + G++PD +LN
Sbjct: 676 IKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLN 719
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 84/178 (47%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+++++N ++ + K+ + M G+ P+ +Y L+ A E+ L +
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALEL 242
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
+M+++G+Q + Y + +G A EI + M + E +PD T++ +I
Sbjct: 243 TNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + EA + ++L +GF+ N+ + + L+ K + D+ ++ L + + PD
Sbjct: 303 QMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPD 360
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+E + D ++ LI + GN + L + ++ + G + N+I Y+ LL ++ + +
Sbjct: 284 DEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVD 343
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + EM N L P+ TY+ L+ + + + +Y+EM + + ++ +L
Sbjct: 344 EALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGIL 403
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+ G +A F+ + S N +PD ++ MI G V EA ++ + +
Sbjct: 404 KGLCEKGMLSDARMYFDSLIMS-NLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
P++ SLI + K ++ + R L + G+ P
Sbjct: 463 TPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEP 499
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
E +K G++P+ +TY L++ ++ + EM + P TY +++ +
Sbjct: 490 ESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQ 549
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
R E+++ + +M+ KG+ YNT++ +AFE+ +DM N +P T
Sbjct: 550 RKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM-LIHNLEPTPAT 608
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRALN 308
++ +I G V +A+ + + + T++I+ + G AQR V+ +
Sbjct: 609 YNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRA---VKVFH 665
Query: 309 RLPELGITPD--------DRFCG-CLLN 327
++ E G +R C CL+N
Sbjct: 666 QMVEKGFEVSIKDYSAVINRLCKRCLIN 693
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L V +MK ++P++ TYN+LL + W V Y ++ D+G + T + ++
Sbjct: 103 LFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDV---YNDIKDSGTPQSARTSSIIVDG 159
Query: 188 Y-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
G++R+ D + R+ K SV +NT+++ +G D A F M
Sbjct: 160 LCGQSRF-RDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFF-CMMLKYGIL 217
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF---VLTSLIQCYGKAQRTDDV 303
PD+++++ +I G + EA + N+M + G +P++ ++ G ++
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277
Query: 304 VRALNRLPELGITPD 318
++ + L + G+ PD
Sbjct: 278 IQKM--LTDEGLKPD 290
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++++I Y +G + + VY +M G PN +TYN L++ G+A +
Sbjct: 297 PNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAV 356
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y++M P+ T+++L+ Y R +D + + EM + +Q + ++ ++
Sbjct: 357 YQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCK 416
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ EA +++ + P ++ + +I + GKV EA + EM G P+ +
Sbjct: 417 QNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKY 476
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD----DRFCGCLLNVMTQTPKEELGKL 340
T LI + R + + N++ + G +PD + F GCLL + + + K+
Sbjct: 477 TYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMKI 535
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 37/202 (18%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D FSTLI Y G D + + EM ++PN T++ ++ + + R +
Sbjct: 368 DVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFL 427
Query: 167 KEMT-DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KE+ ++P RA+ + N ++ +
Sbjct: 428 KELNMRTDIAP---------RAF--------------------------ICNPVIDVLCK 452
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA I +M+ + C+PD +T++ +I +G++SEA FN+M++ G P+
Sbjct: 453 GGKVDEANLILMEME-GKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSI 511
Query: 286 VLTSLIQCYGKAQRTDDVVRAL 307
+ S I C KA +V R +
Sbjct: 512 TVNSFIGCLLKAGMPSEVDRIM 533
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 84/228 (36%), Gaps = 11/228 (4%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA S L AG D + + G YN L+++ R +
Sbjct: 155 PNARFLSFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVAL 214
Query: 166 YKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ G SP+ ++ ++ + + L + M E G N L+
Sbjct: 215 FEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLC 274
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
V E+ ++ C P+ T++S+I+ G++ +A A++N+M+ G PN
Sbjct: 275 RVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNA 334
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFCGC 324
LI YGKA V ++ PD D +C C
Sbjct: 335 VTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRC 382
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 15/200 (7%)
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTD-NGLSPNWNTYASLLRAYGRARYGE 195
+ + P+ +Y ++ + ++ R ++ +MTD +G PN + L + A + +
Sbjct: 115 LAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLD 174
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
++ + + G + YN L+ G +A +FE PD W+F+
Sbjct: 175 AAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVA 234
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA---LNRLPE 312
I G V +A + M E G P+ L+ G R +V R L RL
Sbjct: 235 IKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILV---GGLCRVKEVSRGREVLRRLQR 291
Query: 313 LGITPDDRFCGCLLNVMTQT 332
G+ C+ NV+T T
Sbjct: 292 DGV--------CMPNVVTYT 303
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I G L + MK +KPN+ITY+ L+ + A + K +
Sbjct: 593 DQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLL 652
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM+ +G SP T+ +L+A + R + L ++ M G+ +T+YNTL+ +
Sbjct: 653 NEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYN 712
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G T +A + E+M S PD+ TF+++I G + A + +++ML G PN+
Sbjct: 713 GMTRKAMVVLEEM-SGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVAT 771
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+L+ A R + LN + + GI P +
Sbjct: 772 FNTLLGGLESAGRIGESDMVLNEMKKRGIEPSN 804
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 6/225 (2%)
Query: 96 DTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM 153
DT R+ ++PN ++ I Y D ++YEEM GV P+++T + L+ +
Sbjct: 233 DTMKRDG---VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGL 289
Query: 154 GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSV 213
+ R + +++EM G +PN TY L+ +A+ G ++LS+ E+ +G+ + +
Sbjct: 290 CKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDL 349
Query: 214 TLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFN 273
+Y L+ G DEA ++F S+N P+ T++ +I G V AE + +
Sbjct: 350 IMYTALMDWLCKEGKIDEAKDMFRH-ALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLS 408
Query: 274 EMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EM E PN+ +S+I K + + E GI P+
Sbjct: 409 EMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPN 453
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI + +G+ D + Y++M G+ PN+ T+N LL + A R + +
Sbjct: 733 DTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVL 792
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ P+ TY L+ YG+ + + +Y EM KG V+ YN L++ + V
Sbjct: 793 NEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKV 852
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A E+F +M+ + P S T+ +++ S +E +M E GF P+
Sbjct: 853 GMMSQAKELFNEMQ-NRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGT 911
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
L+S+ + + K + + R L L
Sbjct: 912 LSSISRAFSKPGMSWEARRLLKNL 935
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 42/250 (16%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++ LI AGN DG V EM+ + PN++T++++++ G KR W K
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIIN--GLVKRGWVGKAT 439
Query: 166 --YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY---------------------- 201
+EM + G+ PN TY +++ + E L VY
Sbjct: 440 DYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499
Query: 202 -------------REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
REM E+G+ L Y TL+ G AF++ +++ + +N PD
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQEL-TEKNLLPD 558
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
+ ++ I GK EAE+ EM G +P+ ++I + +T ++ LN
Sbjct: 559 AVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLN 618
Query: 309 RLPELGITPD 318
+ I P+
Sbjct: 619 GMKRSSIKPN 628
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 79 WVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTA--GNF-----DGCLNVY 131
WV + ++KE+ IDPN + YGT G+F + L+VY
Sbjct: 434 WVGKATDYMREMKERG-----------IDPNVVT-----YGTVIDGSFKCLGQEAALDVY 477
Query: 132 EEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRA 191
EM GV+ N ++L++ + + + + + +++EM + G+ + Y +L+ +
Sbjct: 478 HEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKT 537
Query: 192 RYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
V +E+ EK + +YN + +G + EA E+M+S+ +PD T
Sbjct: 538 GNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQST-GLKPDQVT 596
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++MI S GK ++A + N M + +PNL ++LI +A + LN +
Sbjct: 597 YNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMS 656
Query: 312 ELGITP 317
G +P
Sbjct: 657 SSGFSP 662
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 103/249 (41%), Gaps = 38/249 (15%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D +++L+ Y G+ + V E MKA GV +++ YN+L+ + RA + +
Sbjct: 172 LDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDM 231
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
M +G+ PN TY + Y R +D S+Y EM KG+ V + L+ +C
Sbjct: 232 VDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCK 291
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS------------------------ 260
D G EA+ +F +M+ P+ T+ +I +
Sbjct: 292 D-GRFSEAYALFREMEKI-GAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDL 349
Query: 261 ----------CR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
C+ GK+ EA+ MF L PN T LI KA D + L+
Sbjct: 350 IMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSE 409
Query: 310 LPELGITPD 318
+ E I+P+
Sbjct: 410 MEEKSISPN 418
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 1/193 (0%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D L ++E M G+ ++ YN L+ + + + +EM+ G++P+ T+ +L
Sbjct: 681 DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNAL 740
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSEN 244
+ + ++ + ++ S Y +M G+ +V +NTLL G E+ + +MK
Sbjct: 741 ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKK-RG 799
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
+P + T+ ++T + EA ++ EM+ GF P + +LI + K
Sbjct: 800 IEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAK 859
Query: 305 RALNRLPELGITP 317
N + G+ P
Sbjct: 860 ELFNEMQNRGVLP 872
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPN---WNTYASLLR 186
++ EM GV + + Y L+D + + + +E+T+ L P+ +N + + L
Sbjct: 511 LFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLC 570
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
G+++ E S EM+ G++ YNT++A + G T +A ++ MK S + +
Sbjct: 571 MLGKSKEAE---SFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRS-SIK 626
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P+ T+S++I G V +A+ + NEM +GF P ++Q + +R+D ++
Sbjct: 627 PNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEI 686
Query: 307 LNRLPELGITPDDRFCGCLLNVM 329
+ G+ D L+ V+
Sbjct: 687 HEWMMNAGLCADITVYNTLVRVL 709
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
PN +TY L+D + +A + + EM + +SPN T++S++ + +
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441
Query: 201 YREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
REMKE+G+ +V Y T++ + A +++ +M E + + + S++
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEML-CEGVEVNKFIVDSLVNGLK 500
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD-- 318
GK+ +AEA+F EM E G + T+LI K + L E + PD
Sbjct: 501 KNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAV 560
Query: 319 --DRFCGCL 325
+ F CL
Sbjct: 561 VYNVFINCL 569
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 98 RARNEKW-RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
R NE+ +D ++TLI GN V +E+ + P+ + YN ++ +
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + ++ +EM GL P+ TY +++ A R L + MK ++ ++ Y
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNE-M 275
+TL+ + G ++A + +M SS P S T ++ CS +G+ S+ +E M
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEM-SSSGFSPTSLTHRRVLQACS-QGRRSDLILEIHEWM 690
Query: 276 LEAGFEPNLFVLTSLIQ--CYGKAQRTDDVVRALNRLPELGITPD 318
+ AG ++ V +L++ CY R VV L + GI PD
Sbjct: 691 MNAGLCADITVYNTLVRVLCYNGMTRKAMVV--LEEMSGRGIAPD 733
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+T I + G + + ++ +M+ GV PN++T+N ++D +G R +
Sbjct: 272 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 331
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G+ P TY+ L++ RA+ D V +EM +KG +V +YN L+ +
Sbjct: 332 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 391
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A EI +D+ S+ S T++++I G+ AE + EML GF N
Sbjct: 392 GSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 450
Query: 287 LTSLI 291
TS+I
Sbjct: 451 FTSVI 455
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + + +++ K G+ P++ TY+ ++D +A+R + + +
Sbjct: 587 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 646
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + PN Y L+RAY R+ L + +MK KG+ + Y +L+ + +
Sbjct: 647 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 706
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA +FE+M+ E +P+ + ++++I G++ + E + EM PN
Sbjct: 707 SRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 765
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T +I Y + + R LN + E GI PD
Sbjct: 766 YTVMIGGYARDGNVTEASRLLNEMREKGIVPD 797
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
++EM + V+PN + YN+L+ R+ R + ++M G+SPN TY SL++
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 705
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
E+ ++ EM+ +G++ +V Y L+ +G + + +M S +N P+
Sbjct: 706 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS-KNVHPNKI 764
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
T++ MI + G V+EA + NEM E G P+ I Y K
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 34/252 (13%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N+ + +D + L+ AG D + +E+ G + ++YN L+ K+
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ EM GL P+ TY+ L+ E+ + + + K GM V Y+ ++
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 221 AMCADVGYTDEAFEIFEDMKSS----------------------------------ENCQ 246
C T+E E F++M S +
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P+S T++S+I S +V EA+ +F EM G EPN+F T+LI YGK + V
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 750
Query: 307 LNRLPELGITPD 318
L + + P+
Sbjct: 751 LREMHSKNVHPN 762
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI+ Y +G L + E+MK G+ PN TY +L+ M R + K
Sbjct: 654 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 713
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM GL PN Y +L+ YG+ + REM K + + Y ++
Sbjct: 714 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 773
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
A G EA + +M+ + PDS T+ I +G V EA
Sbjct: 774 ARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 114 LIKLYGTAGNFDGC---LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
LI++Y T DGC L+V+ + G+ P+ T N LL ++ RA + + ++
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVV 265
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+SP+ + + + A+ + E+ + ++ +M+E G+ +V +NT++ G D
Sbjct: 266 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 325
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EAF +F++ +P T+S ++ + ++ +A + EM + GF PN+ V +L
Sbjct: 326 EAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384
Query: 291 IQCYGKAQRTDDVVRALNRLPELGIT 316
I + +A + + + + G++
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLS 410
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 34/272 (12%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ ++ +F+++I L + FD L EM + P L+ + + + +
Sbjct: 444 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 503
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + + G + T +LL A ++ + +E+ +G + YNTL++ C
Sbjct: 504 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 563
Query: 224 ADVGYTDEAFEIFEDM-----------------------KSSENCQ-----------PDS 249
DEAF ++M K E Q PD
Sbjct: 564 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 623
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+T+S MI C + E + F+EM+ +PN V LI+ Y ++ R +
Sbjct: 624 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 683
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ GI+P+ L+ M+ + E KL+
Sbjct: 684 MKHKGISPNSATYTSLIKGMSIISRVEEAKLL 715
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S L+K A V +EM G PN+I YNNL+D+ A + I M
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GLS +TY +L++ Y + ++ + +EM G ++ + +++ + D
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 465
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A +M N P +++I+ GK S+A ++ + L GF + +L
Sbjct: 466 SALRFVGEM-LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +A + D+ R + G D
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMD 552
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN+ +++LIK + ++EEM+ G++PN+ Y L+D G+ + +V+
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM + PN TY ++ Y R + + EM+EKG+ Y +
Sbjct: 749 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808
Query: 224 ADVGYTDEAFE 234
G EAF+
Sbjct: 809 LKQGGVLEAFK 819
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ + + G+ P+ T LL + RA + + ++ KG+ V L+ T +
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFC 284
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA ++F M+ + P+ TF+++I G+ EA +M+E G EP L
Sbjct: 285 KGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 343
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ L++ +A+R D L + + G P+
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 377
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
L V+ + KGM S T N LL + E F+ + + PD + F++ I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAI 280
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
GKV EA +F++M EAG PN+ ++I G R D+ ++ E G+
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340
Query: 317 P 317
P
Sbjct: 341 P 341
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 114/224 (50%), Gaps = 7/224 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI+ Y GN D LN++E M +KP+ +TYN L+D +A + K ++
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + P+ +Y ++L + + + L++ +M EKG++ ++ NTL+
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A+E M S+ PDS++++++I + +A + NEM + G + N+
Sbjct: 621 GDMPKAYEYLSKMISN-GIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Query: 287 LTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ + GK Q + V+R ++ E+GI PD L+N
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLR---KMIEIGINPDGATYSSLIN 720
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI + G L + +EM A G +++TYN L+ + + K ++
Sbjct: 431 DNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLF 490
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + G+ P++ T+ +L+R Y + + L+++ M ++ YNTL+
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G A E+++DM ++ PD ++ +++ G + EA + ++MLE G PNL
Sbjct: 551 GEMGRAKELWDDM-IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI+ Y ++ L+++ GI PD
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 8/238 (3%)
Query: 86 RASKLKEKSYDTRA-RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A KL+E S + R + + NA + L+ G D +Y E+ G++ N+
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVY 258
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T N +++ + + ++ V +M G+ + TY +L+ AY R E+ +
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+GM+ + YN +L +G D A ++ +M P++ T+++++ R
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL-GLTPNAATYNTLLVEICRRDN 377
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL---GITPDD 319
+ EA+ +F+EM G P+L +SLI G R + +AL E+ GI PD+
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLI---GVLARNGHLYQALMHFREMERSGIVPDN 432
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 42/258 (16%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI Y G + + + G++P ++TYN +L + + + + K +
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM GL+PN TY +LL R + ++ EM +G+ + +++L+ + A
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Query: 227 GYTDEAFEIFEDMKSS----------------------------------ENCQPDSWTF 252
G+ +A F +M+ S C D T+
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTY 470
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++ + + ++A+ +FNEM+E G P+ + T+LI+ Y K D + +
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Query: 313 LGITPD--------DRFC 322
+ PD D FC
Sbjct: 531 TNLKPDKVTYNTLIDGFC 548
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ T++ + ++G LN+ ++M G++PN++T N L+ R+ +
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL 630
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
+M NG+ P+ +Y +L+ Y + E + EM+++G+Q ++ YN +L CA+
Sbjct: 631 SKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAE 690
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA ++ M PD T+SS+I + + EA +EML+ G P+
Sbjct: 691 -GKMQEAEQVLRKMIEI-GINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ Y+ L+ T +AK+ + ++ + G+S + N LL R + + +Y E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 204 MKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+ G++L+V N ++ A+C D + + F DM+ + D T++++I
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMF-FLSDME-GKGVFADIVTYNTLINAYCRE 305
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G V EA + N G EP L +++ K + D L + +LG+TP+
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPN 361
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+T I + G + + ++ +M+ GV PN++T+N ++D +G R +
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G+ P TY+ L++ RA+ D V +EM +KG +V +YN L+ +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A EI +D+ S+ S T++++I G+ AE + EML GF N
Sbjct: 379 GSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 287 LTSLI 291
TS+I
Sbjct: 438 FTSVI 442
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + + +++ K G+ P++ TY+ ++D +A+R + + +
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + PN Y L+RAY R+ L + +MK KG+ + Y +L+ + +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA +FE+M+ E +P+ + ++++I G++ + E + EM PN
Sbjct: 694 SRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T +I Y + + R LN + E GI PD
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
++EM + V+PN + YN+L+ R+ R + ++M G+SPN TY SL++
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
E+ ++ EM+ +G++ +V Y L+ +G + + +M S +N P+
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS-KNVHPNKI 751
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
T++ MI + G V+EA + NEM E G P+ I Y K
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 34/252 (13%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N+ + +D + L+ AG D + +E+ G + ++YN L+ K+
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ EM GL P+ TY+ L+ E+ + + + K GM V Y+ ++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 221 AMCADVGYTDEAFEIFEDMKSS----------------------------------ENCQ 246
C T+E E F++M S +
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P+S T++S+I S +V EA+ +F EM G EPN+F T+LI YGK + V
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 307 LNRLPELGITPD 318
L + + P+
Sbjct: 738 LREMHSKNVHPN 749
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI+ Y +G L + E+MK G+ PN TY +L+ M R + K
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM GL PN Y +L+ YG+ + REM K + + Y ++
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
A G EA + +M+ + PDS T+ I +G V EA
Sbjct: 761 ARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 114 LIKLYGTAGNFDGC---LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
LI++Y T DGC L+V+ + G+ P+ T N LL ++ RA + + ++
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVV 252
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+SP+ + + + A+ + E+ + ++ +M+E G+ +V +NT++ G D
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EAF +F++ +P T+S ++ + ++ +A + EM + GF PN+ V +L
Sbjct: 313 EAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 291 IQCYGKAQRTDDVVRALNRLPELGIT 316
I + +A + + + + G++
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLS 397
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 34/272 (12%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ ++ +F+++I L + FD L EM + P L+ + + + +
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + + G + T +LL A ++ + +E+ +G + YNTL++ C
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 224 ADVGYTDEAFEIFEDM-----------------------KSSENCQ-----------PDS 249
DEAF ++M K E Q PD
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+T+S MI C + E + F+EM+ +PN V LI+ Y ++ R +
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ GI+P+ L+ M+ + E KL+
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S L+K A V +EM G PN+I YNNL+D+ A + I M
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GLS +TY +L++ Y + ++ + +EM G ++ + +++ + D
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A +M N P +++I+ GK S+A ++ + L GF + +L
Sbjct: 453 SALRFVGEM-LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +A + D+ R + G D
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN+ +++LIK + ++EEM+ G++PN+ Y L+D G+ + +V+
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM + PN TY ++ Y R + + EM+EKG+ Y +
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 224 ADVGYTDEAFE 234
G EAF+
Sbjct: 796 LKQGGVLEAFK 806
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ + + G+ P+ T LL + RA + + ++ KG+ V L+ T +
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFC 271
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA ++F M+ + P+ TF+++I G+ EA +M+E G EP L
Sbjct: 272 KGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 330
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ L++ +A+R D L + + G P+
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
L V+ + KGM S T N LL + E F+ + + PD + F++ I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAI 267
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
GKV EA +F++M EAG PN+ ++I G R D+ ++ E G+
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 317 P 317
P
Sbjct: 328 P 328
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I +GN D + ++E+MK G KP T+N L+ G+ + + +
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 167 KEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M D L PN T L++A+ R E+ ++ +M+ G++ V +NTL A
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G T A ++ +P+ T +++ GK+ EA F M E G PNLF
Sbjct: 508 IGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
V SLI+ + D V ++ + E G+ PD L+N
Sbjct: 568 VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 609
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 4/236 (1%)
Query: 86 RASKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+ KL+E S D R+E + + + L++ + + N+ +M++ GVKP++
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 144 ITYNNLLDTMGRAKRPWQVK-TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+T+N L R + I M N + PN T +++ Y E+ L +
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
MKE G+ ++ ++N+L+ ++ D E+ D+ +PD TFS+++ S
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV-DLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + E ++ +MLE G +P++ + L + Y +A + + LN++ + G+ P+
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L++ + RP + +I+ + + G P+ TY +L+ A R ++ LS+ ++++ G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ L+N ++ ++ G D+A +IFE MK S C+P + TF+++I GK+ E+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKES-GCKPTASTFNTLIKGYGKIGKLEES 443
Query: 269 EAMFNEML-EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + ML + +PN L+Q + ++ ++ + ++ G+ PD
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G KP++ITY L+ + R K + ++ ++ NGL P+ + +++ A + +
Sbjct: 349 GHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 408
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ ++ +MKE G + + + +NTL+ +G +E+ + + M E QP+ T + ++
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT---DDVVRALNRLPELG 314
+ K+ EA + +M G +P++ +L + Y + T +D++ + R+
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNK 526
Query: 315 ITPDDRFCGCLLNVMTQTPKEE 336
+ P+ R CG ++N + K E
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKME 548
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R ++ + PN F++LIK + + DG V + M+ GVKP+++T++ L++
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + IY +M + G+ P+ + ++ L + Y RA E + +M++ G++ +V +Y
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+++ G +A ++++ M P+ T+ ++I
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPW 160
IDP+ AFS L K Y AG + + +M+ GV+PN++ Y ++ + G K+
Sbjct: 632 IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 691
Query: 161 QVKTIYKEMTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
QV YK+M GLSPN TY +L+ +G A+ + ++M+ K +
Sbjct: 692 QV---YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNN 148
EK+ + K+ + PN ++ +I + +AG + VY++M I G+ PN+ TY
Sbjct: 653 EKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYET 712
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
L+ G AK+PW+ + + K+M + P T
Sbjct: 713 LIWGFGEAKQPWKAEELLKDMEGKNVVPTRKT 744
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
RG+ EA ++FN ++E G +P+L T+L+ + + ++ ++++ + G+ PD
Sbjct: 332 RGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTIL 391
Query: 322 CGCLLNVMTQTPK-EELGKLVECVEKSNSK 350
++N +++ ++ K+ E +++S K
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCK 421
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 5/221 (2%)
Query: 100 RNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R+ R+ P+ FSTLI G D N ++M A G PN++TYN L++ + +A
Sbjct: 215 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKAD 272
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + + + M D G++P+ TY+ L+ A+ +A ++ L + M +G +V +N
Sbjct: 273 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 332
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
+++ + EAF+I + + PD TF+ +I G +A A+F EM+
Sbjct: 333 SIIDGLCKSDRSGEAFQIALQVY-NRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 391
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+P++ +LI KA + + L+ + LG+ P+
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 432
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 15/224 (6%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I + + ++EE+ G P+++TYN L+D++ +A + + ++ M+
Sbjct: 84 YNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMS 143
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL--SVTLYNTLLAMCADVGY 228
G PN TY+ L+ + ++ + +EM K + ++ YN+ L
Sbjct: 144 SRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 203
Query: 229 TDEAFEIFEDMK-SSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
T EA E+ ++ S PD+ TFS++I +C C G+ EA ++M+ G+ PN+
Sbjct: 204 TAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC-GQTD--EACNDDMIAGGYVPNVVT 260
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
+L+ KA + + + + + G+TPD D FC
Sbjct: 261 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 304
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S L+ + A D L + M + G PN++T+N+++D + ++ R + I
Sbjct: 292 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIA 351
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++ + L P+ T+ L+ +A E +++ EM K MQ V + L+
Sbjct: 352 LQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKA 411
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G + A +I D+ + P+ T++ ++ G++ E EM+ +G P
Sbjct: 412 GQVEAARDIL-DLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMT 470
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
SL+ +A RTDD ++ +++L G PD
Sbjct: 471 YGSLVYALCRASRTDDALQLVSKLKSFGWDPD 502
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 7/224 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI AGNF+ ++EEM A ++P+++T+ L+D + +A + + I
Sbjct: 362 DKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDIL 421
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M + G+ PN TY L+ ++ E+ EM G Y +L+
Sbjct: 422 DLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRA 481
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
TD+A ++ +KS PD+ T++ ++ GK +A + EM+ G +P+ F
Sbjct: 482 SRTDDALQLVSKLKSF-GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 540
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPEL---GITPDDRFCGCLLN 327
+ C+G R+ ++ + L + G+ PD C +L+
Sbjct: 541 FAA---CFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 7/216 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI AG+ + ++ M + G PN++TY+ L++ + + R + + +
Sbjct: 115 DVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELI 174
Query: 167 KEMTDNG--LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS--VTLYNTLLAM 222
+EMT + PN TY S L + + + R +++ +++S ++TL+
Sbjct: 175 QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDG 234
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
G TDEA +DM + P+ T+++++ K+ A AM M++ G P
Sbjct: 235 LCKCGQTDEACN--DDMIAG-GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTP 291
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + L+ + KA R D+ + L+ + G TP+
Sbjct: 292 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 327
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
F L VY M + P+ +T+N L+ +A Q +++EM + P+ T+ +
Sbjct: 348 FQIALQVYNRM----LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ +A E + M G+ +V YN L+ G +E E E+M SS
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSS- 462
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
C P+S T+ S++ + +A + +++ G++P+ L+ K+ +T+
Sbjct: 463 GCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQA 522
Query: 304 VRALNRLPELGITPDD-RFCGCL 325
+ L + G PD F C
Sbjct: 523 ITVLEEMVGKGHQPDSFTFAACF 545
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 133/325 (40%), Gaps = 33/325 (10%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYK-EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
YN +L ++ RA + I++ EM +G++P TY +++ ++ + ++ E+
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
++G V YNTL+ G +EA + M SS C P+ T+S +I G+
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGM-SSRGCVPNVVTYSVLINGLCKVGR 166
Query: 265 VSEAEAMFNEMLEAGFE--PNLFVLTSLIQCYGKAQRTDDVVRALNRLPE--LGITPDDR 320
+ EA + EM + PN+ S + K T + + L + L ++PD
Sbjct: 167 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD-- 224
Query: 321 FCGCLLNVMTQTPKEELGKLVECVEKSNSKL---GYVVKLLLEEQDIEGDFKKEATELFN 377
V T + L K + E N + GYV ++ + G K + E +
Sbjct: 225 ------TVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAH 278
Query: 378 S-ISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSRSPTQWSLHLKSLS 436
+ I V K +I V L++ CK + LE+ + SR T + S+
Sbjct: 279 AMIESMVDKGVTPDVITYSV---LVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI- 334
Query: 437 LGAALTALHIWINDLSKALESGEEF 461
I+ L K+ SGE F
Sbjct: 335 -----------IDGLCKSDRSGEAF 348
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 45/107 (42%)
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
SV YN +L G T A EIF + + P T++++I ++ +
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
F E+++ G P++ +LI KA ++ R + G P+
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPN 150
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++++I Y G+F+ + + +PN IT ++L + Q K I+
Sbjct: 399 DIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIH 458
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+T +GL N + SL+ Y + + E V+++M M +VT YNT+++ C
Sbjct: 459 GYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQM----MVRNVTTYNTMISACGSH 514
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EAGFEPNLF 285
G ++ +E MK N +P+ TF S+++ CS G + ++N M+ + G EPN+
Sbjct: 515 GQGEKGLAFYEQMKEEGN-RPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNME 573
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ ++ G+A D + + R+P +TPD G LL K EL +L+
Sbjct: 574 HYSCMVDLIGRAGDLDGAYKFITRMP---MTPDANVFGSLLGACRLHNKVELTELL 626
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 18/237 (7%)
Query: 62 NPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTA 121
P PH + +S ++VN S L+ RA K I NA +++
Sbjct: 60 QPTCPHSSSFASQLVNVYVNFGS-----LQHAFLTFRALPHKPIIAWNA---ILRGLVAV 111
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G+F ++ Y M GV P+ TY +L + Q+ E N
Sbjct: 112 GHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACS-SLHALQLGRWVHETMHGKTKANVYVQ 170
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV--GYTDEAFEIFEDM 239
+++ + + ED ++ EM ++ + L +C + G EA +F M
Sbjct: 171 CAVIDMFAKCGSVEDARRMFEEMPDRDLASWTAL------ICGTMWNGECLEALLLFRKM 224
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
+S E PDS +S++ C V A+ + +GFE +L+V ++I Y K
Sbjct: 225 RS-EGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCK 280
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKA-IGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+D F+ L+ Y G + L + E M + V P+ +TYN +L M + R VK
Sbjct: 202 LDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKD 261
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +M NGL PN TY +L+ Y + ++ + MK+ + + YN L+
Sbjct: 262 LLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVC 321
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G E E+ + MKS + QPD T++++I C G EA+ + +M G +PN
Sbjct: 322 NAGSIREGLELMDVMKSLK-LQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQ 380
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPEL-GITPD 318
++ K ++ ++V R + L E+ G +PD
Sbjct: 381 VTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPD 415
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 8/227 (3%)
Query: 91 KEKSYDTRARNEKWRIDPNAFS-------TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
KE+ + R K ++ + FS TLIK Y G+ G L + EM G+K N
Sbjct: 392 KEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
IT N +LD + + ++ + + G + TY +L+ Y R E ++ E
Sbjct: 452 ITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDE 511
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
MK + +VT +N+L+ G T+ A E F+++ S PD TF+S+I G
Sbjct: 512 MKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAES-GLLPDDCTFNSIILGYCKEG 570
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+V +A +NE ++ F+P+ + L+ K T+ + N L
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 55/270 (20%)
Query: 103 KWRIDPNAFSTLIKLYGTAGNFDGCL---------NVYEEMKAIGVKPNMITYNNLLDTM 153
K + D ++TLI DGC + E+M+ GVKPN +T+N L +
Sbjct: 340 KLQPDVVTYNTLI---------DGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWL 390
Query: 154 GRAKRPWQVKTIYKEMTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ ++ +V KE+ + +G SP+ TY +L++AY + L + REM +KG++++
Sbjct: 391 CKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 213 VTLYNTLL-AMCAD-----------------------------VGY-----TDEAFEIFE 237
NT+L A+C + +GY ++AFE+++
Sbjct: 451 TITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWD 510
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
+MK + P TF+S+I GK A F+E+ E+G P+ S+I Y K
Sbjct: 511 EMKRIK-ITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKE 569
Query: 298 QRTDDVVRALNRLPELGITPDDRFCGCLLN 327
R + N + PD+ C LLN
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 5/210 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A + +D + TLI Y + +++EMK I + P + T+N+L+ + +
Sbjct: 477 AHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGK 536
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ E+ ++GL P+ T+ S++ Y + E Y E + + N
Sbjct: 537 TELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI 596
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
LL G T++A F + + + D+ T+++MI+ K+ EA + +EM E
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLITER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Query: 279 GFEPNLFVLTSLIQCY---GKAQRTDDVVR 305
EP+ F S+I GK D++++
Sbjct: 655 RLEPDRFTYNSIITSLMEDGKLSEADELLK 684
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 32/208 (15%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F + Y AG L V+++M + +KPN++T N LL +G + P
Sbjct: 134 FDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLL--IGLVRYP----------- 180
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+S A R V+ +M + G+ L V +N L+ G +
Sbjct: 181 -----------SSFSIASAR--------EVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLE 221
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A + E M S N PD+ T+++++ S +G++S+ + + +M G PN +L
Sbjct: 222 DALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNL 281
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ Y K + + + + + I PD
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNILPD 309
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I +GN D + ++E+MK G KP T+N L+ G+ + + +
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 167 KEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M D L PN T L++A+ R E+ ++ +M+ G++ V +NTL A
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G T A ++ +P+ T +++ GK+ EA F M E G PNLF
Sbjct: 508 IGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
V SLI+ + D V ++ + E G+ PD L+N
Sbjct: 568 VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 609
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 4/236 (1%)
Query: 86 RASKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+ KL+E S D R+E + + + L++ + + N+ +M++ GVKP++
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 144 ITYNNLLDTMGRAKRPWQVK-TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+T+N L R + I M N + PN T +++ Y E+ L +
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
MKE G+ ++ ++N+L+ ++ D E+ D+ +PD TFS+++ S
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV-DLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + E ++ +MLE G +P++ + L + Y +A + + LN++ + G+ P+
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPN 670
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L++ + RP + +I+ + + G P+ TY +L+ A R ++ LS+ ++++ G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ L+N ++ ++ G D+A +IFE MK S C+P + TF+++I GK+ E+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKES-GCKPTASTFNTLIKGYGKIGKLEES 443
Query: 269 EAMFNEML-EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + ML + +PN L+Q + ++ ++ + ++ G+ PD
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G KP++ITY L+ + R K + ++ ++ NGL P+ + +++ A + +
Sbjct: 349 GHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 408
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ ++ +MKE G + + + +NTL+ +G +E+ + + M E QP+ T + ++
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT---DDVVRALNRLPELG 314
+ K+ EA + +M G +P++ +L + Y + T +D++ + R+
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNK 526
Query: 315 ITPDDRFCGCLLNVMTQTPKEE 336
+ P+ R CG ++N + K E
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKME 548
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R ++ + PN F++LIK + + DG V + M+ GVKP+++T++ L++
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + IY +M + G+ P+ + ++ L + Y RA E + +M++ G++ +V +Y
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYT 675
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+++ G +A ++++ M P+ T+ ++I
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPW 160
IDP+ AFS L K Y AG + + +M+ GV+PN++ Y ++ + G K+
Sbjct: 632 IDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 691
Query: 161 QVKTIYKEMTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
QV YK+M GLSPN TY +L+ +G A+ + ++M+ K +
Sbjct: 692 QV---YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNN 148
EK+ + K+ + PN ++ +I + +AG + VY++M I G+ PN+ TY
Sbjct: 653 EKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYET 712
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
L+ G AK+PW+ + + K+M + P T
Sbjct: 713 LIWGFGEAKQPWKAEELLKDMEGKNVVPTRKT 744
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
RG+ EA ++FN ++E G +P+L T+L+ + + ++ ++++ + G+ PD
Sbjct: 332 RGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTIL 391
Query: 322 CGCLLNVMTQTPK-EELGKLVECVEKSNSK 350
++N +++ ++ K+ E +++S K
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCK 421
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 114/224 (50%), Gaps = 7/224 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+TLI+ Y GN D LN++E M +KP+ +TYN L+D +A + K ++
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M + P+ +Y ++L + + + L++ +M EKG++ ++ NTL+
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G +A+E M S+ PDS++++++I + +A + NEM + G + N+
Sbjct: 621 GDMPKAYEYLSKMISN-GIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Query: 287 LTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
++ + GK Q + V+R ++ E+GI PD L+N
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLR---KMIEIGINPDGATYSSLIN 720
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ LI + G L + +EM A G +++TYN L+ + + K ++
Sbjct: 431 DNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLF 490
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + G+ P++ T+ +L+R Y + + L+++ M ++ YNTL+
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G A E+++DM ++ PD ++ +++ G + EA + ++MLE G PNL
Sbjct: 551 GEMGRAKELWDDM-IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI+ Y ++ L+++ GI PD
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 8/238 (3%)
Query: 86 RASKLKEKSYDTRA-RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
+A KL+E S + R + + NA + L+ G D +Y E+ G++ N+
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVY 258
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
T N +++ + + ++ V +M G+ + TY +L+ AY R E+ +
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+GM+ + YN +L +G D A ++ +M P++ T+++++ R
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL-GLTPNAATYNTLLVEICRRDN 377
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL---GITPDD 319
+ EA+ +F+EM G P+L +SLI G R + +AL E+ GI PD+
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLI---GVLARNGHLYQALMHFREMERSGIVPDN 432
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 42/258 (16%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI Y G + + + G++P ++TYN +L + + + + K +
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM GL+PN TY +LL R + ++ EM +G+ + +++L+ + A
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Query: 227 GYTDEAFEIFEDMKSS----------------------------------ENCQPDSWTF 252
G+ +A F +M+ S C D T+
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTY 470
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++ + + ++A+ +FNEM+E G P+ + T+LI+ Y K D + +
Sbjct: 471 NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Query: 313 LGITPD--------DRFC 322
+ PD D FC
Sbjct: 531 TNLKPDKVTYNTLIDGFC 548
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ T++ + ++G LN+ ++M G++PN++T N L+ R+ +
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL 630
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
+M NG+ P+ +Y +L+ Y + E + EM+++G+Q ++ YN +L CA+
Sbjct: 631 SKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAE 690
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA ++ M PD T+SS+I + + EA +EML+ G P+
Sbjct: 691 -GKMQEAEQVLRKMIEI-GINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ Y+ L+ T +AK+ + ++ + G+S + N LL R + + +Y E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 204 MKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
+ G++L+V N ++ A+C D + + F DM+ + D T++++I
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMF-FLSDME-GKGVFADIVTYNTLINAYCRE 305
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G V EA + N G EP L +++ K + D L + +LG+TP+
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPN 361
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 156/355 (43%), Gaps = 63/355 (17%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+I P+ ++TLI+ +G G N++ EM + G+KP+ +TY L+D +A
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE-DTLS-VYREMKEKGMQLSVTLYNTLL 220
+++ EM G++PN TY +L+ G ++GE DT + + EM++KG+QL+V +YN+++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALID--GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G ++A ++ ++M+ + PD+ T++++I G + +A + EML+ G
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVA-GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALN-------------------------------- 308
+P + L+ + +D R L
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629
Query: 309 ---RLPELGITPDDRFCGCLL--NVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQD 363
R+ G+ PD L+ + + KE E +EK GYV +
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK-----GYVPTVTSYNAL 684
Query: 364 IEGDFKK----EATELFNSISKDVKKA---YCNCLIDLC-------VNLNLLENA 404
I+ +KK EA ELF + A N +D+C + LNL + A
Sbjct: 685 IKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEA 739
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + G+ ++EM + + P+ ITY L+ G+ + + + ++
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421
Query: 167 KEMTDNGLSPNWNTYASLLRAY---------------------------------GRARY 193
EM GL P+ TY +L+ Y G ++
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481
Query: 194 GE-DTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
GE DT + + EM++KG+QL+V +YN+++ G ++A ++ ++M+ + PD+ T
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA-GIDPDAIT 540
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I G + +A + EML+ G +P + L+ + +D R L +
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600
Query: 312 ELGITPD 318
E GI PD
Sbjct: 601 EKGIVPD 607
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I Y G L + ++M+ G+KPN TYN+++ + + + ++ + +
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + P+ Y +L+ + + + + EM K + Y TL+
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E +F +M S +PD T++++I + G++ A ++ NEM++ G PN+
Sbjct: 412 GKVIEPQNLFHEM-ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+LI K D L+ + + G+
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGL 499
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Query: 141 PNMITYNNLLD---TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
P++++Y+ ++D +G K+ + + +M GL PN TY S++ + +
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALK---LMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA 347
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
V REM + + +Y TL+ +G+ A + F++M S+ PD T++++I
Sbjct: 348 EKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQ 406
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
GKV E + +F+EM+ G +P+ T+LI Y KA + N + ++G+TP
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 318 DDRFCGCLLN 327
+ G L++
Sbjct: 467 NIVTYGALID 476
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 135/300 (45%), Gaps = 15/300 (5%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
NAF + I A N +G + G+ N +YN ++ ++ R + + + +
Sbjct: 229 NAFLSRI-----ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQ 283
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M +P+ +Y++++ Y + L + +M+ KG++ + YN+++ + +G
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ EA ++ +M S+ PD+ ++++I G V A F+EML P+ T
Sbjct: 344 SFEAEKVLREM-MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYT 402
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
+LIQ +G+ + + + + G+ PD+ L++V + G++V N
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA-----GEMVNAFSLHN 457
Query: 349 S--KLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
++G ++ I+G K + N + +++K +++C+ +++ CK
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK--GLQLNVCIYNSMVNGICK 515
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R RN+ D N ++ LIK + A N +Y+EM G P + +YN L+ + K
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKK 692
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTY 181
+ + + +++EM +GL + Y
Sbjct: 693 KILEARELFEEMRGHGLVADGEIY 716
>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 755
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++T+I Y T G D + + G P++ITY L+ + ++++
Sbjct: 474 DCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVF 533
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M GL P+ TY +L+ YG+ + EM+ G+ V YN L+
Sbjct: 534 RIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 593
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY DEA EI ++ P + F+ +I S RG EA ++ M + +P++
Sbjct: 594 GYVDEANEIISEL-IRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVT 652
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++L+ Y +AQR + + ++L + G+ PD
Sbjct: 653 CSALLHGYCRAQRMEKAIVLFDKLLDAGLKPD 684
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 9/238 (3%)
Query: 104 WRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKR 158
+R+ PN F S+ + + G+ +++E+ +G+ P+ Y ++D T+GR +
Sbjct: 434 FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDK 493
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+Q + + +G P+ TY L+ A + D SV+R MK +G+ V YN
Sbjct: 494 AFQ---FFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNN 550
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ ++ FE+ ++M+S+ PD T++ +I RG V EA + +E++
Sbjct: 551 LMYGYGKTHQLNKVFELIDEMRSA-GISPDVATYNILIHSMVVRGYVDEANEIISELIRR 609
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
GF P+ T +I K + + +L + PD C LL+ + + E
Sbjct: 610 GFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRME 667
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 4/214 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D AF+ I AG +V ++K G+ + ++ ++++D + +P +
Sbjct: 370 RPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA-- 427
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
K + L PN Y+S L ++++E+ E G+ Y T++
Sbjct: 428 -IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYC 486
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G TD+AF+ F + S N P T++ +I CS G +S+AE++F M G P++
Sbjct: 487 TLGRTDKAFQFFGALLKSGN-PPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDV 545
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ YGK + + V ++ + GI+PD
Sbjct: 546 VTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPD 579
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 35/175 (20%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM------ 153
+ E D ++ L+ YG + + +EM++ G+ P++ TYN L+ +M
Sbjct: 537 KTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYV 596
Query: 154 ---------------------------GRAKRP--WQVKTIYKEMTDNGLSPNWNTYASL 184
G +KR + ++ M D + P+ T ++L
Sbjct: 597 DEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSAL 656
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
L Y RA+ E + ++ ++ + G++ V LYNTL+ VG ++A E+ M
Sbjct: 657 LHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 711
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 89/245 (36%), Gaps = 33/245 (13%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R+ F LI D L + ++ G+ P+ +L++ + RA +
Sbjct: 265 RVLETVFCMLIDCCIKERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELARE 324
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ M G N + +R Y Y + + MK+ G++ + + +
Sbjct: 325 FVEHMLSRGRHLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLC 384
Query: 225 DVGYTDEA---------FEIFED----------------------MKSSENCQPDSWTFS 253
G+ EA F I +D + S +P+ + +S
Sbjct: 385 KAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYS 444
Query: 254 SMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
S ++ ICS G + A +F E+ E G P+ + T++I Y RTD + L +
Sbjct: 445 SFLSNICS-TGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLK 503
Query: 313 LGITP 317
G P
Sbjct: 504 SGNPP 508
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
AF+ +I G+F ++ M + VKP+++T + LL RA+R + ++ ++
Sbjct: 617 AFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKL 676
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
D GL P+ Y +L+ Y E + M ++GM
Sbjct: 677 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 716
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 113/226 (50%), Gaps = 16/226 (7%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PNA ++TLI Y GN + + V +M G++PN+IT++ L+D +A + +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCA 224
Y EM GL P+ Y +L+ + + ++ +++EM+E G+ +V + L+ +C
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Query: 225 DVGYTDEAFEIF-----EDMKSSEN-------CQPDSWTFSSMITICSCRGKVSEAEAMF 272
D G +A ++F D S+ C P+ ++++I G++ +A F
Sbjct: 521 D-GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFF 579
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++M +G P++F +IQ + +A DV+ + ++GI P+
Sbjct: 580 SDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 104 WRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
+ + PN F + LI Y AGN L+++ E++ + P++ TY+ L+ + R +
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +EM G PN TY +L+ Y + E + V +M EKG++ ++ ++TL+
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G + A ++ +M + PD ++++I G EA + EM EAG
Sbjct: 447 GYCKAGKMEAAMGLYTEM-VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVR 305
PN+F L+ LI K R D ++
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIK 529
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 22/239 (9%)
Query: 102 EKWRIDPNAFSTLIKLYGTAG-----NFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRA 156
EK I P+ F+ I + G G DG L +EMK G PN +TYN L+D +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLL---QEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 157 KRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLY 216
+ + +MT+ G+ PN T+++L+ Y +A E + +Y EM KG+ V Y
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476
Query: 217 NTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF---- 272
L+ G T EAF + ++M+ + P+ +T S +I G++S+A +F
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEA-GLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535
Query: 273 ---------NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
NE+ + PN + T+LIQ R + + + G+ PD C
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 133 EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRAR 192
+M + GV PN+ YN L+D +A + +++ E+ + + P+ TY+ L++
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD 382
Query: 193 YGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
E+ + +EMK+KG + YNTL+ G ++A E+ M + + +P+ TF
Sbjct: 383 RMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM-TEKGIEPNIITF 441
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
S++I GK+ A ++ EM+ G P++ T+LI + K T + R + E
Sbjct: 442 STLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501
Query: 313 LGITPDDRFCGCLLN 327
G+ P+ CL++
Sbjct: 502 AGLHPNVFTLSCLID 516
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G FD VY +M A G PN++TY L+D R + ++ EM + + P Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231
Query: 182 ASLLRAY-GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
L+R G +R E S++R M+ GM ++ YNT++ + + +A E++++M
Sbjct: 232 TILIRGLCGESRISEAE-SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM- 289
Query: 241 SSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+ P+ TF +I +C VS A +M G PN+FV LI Y KA
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVS-ARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 300 TDDVVRALNRLPELGITPD 318
+ + + + + I PD
Sbjct: 349 LSEALSLHSEIEKHEILPD 367
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
RN + ++T++ Y + L +Y+EM G+ PN++T+ L+D + +
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +M G+ PN Y L+ Y +A + LS++ E+++ + V Y+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ V +EA + ++MK + P++ T++++I G + +A + ++M E G
Sbjct: 375 IKGLCGVDRMEEADGLLQEMK-KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EPN+ ++LI Y KA + + + + G+ PD
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 116/254 (45%), Gaps = 22/254 (8%)
Query: 83 KSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPN 142
++ R S++ ++ +R E + PN F LI + G + L VY +M V P
Sbjct: 101 QNSRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPA 157
Query: 143 MITYNNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
M N +LD + GR W+V Y +M G SPN TY +L+ G R G D L
Sbjct: 158 MQACNMVLDGLVKKGRFDTMWKV---YGDMVARGASPNVVTYGTLID--GCCRQG-DFLK 211
Query: 200 VYR---EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+R EM EK + +V +Y L+ EA +F M++S P+ +T+++M+
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNS-GMLPNLYTYNTMM 270
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA---LNRLPEL 313
V +A ++ EML G PN+ LI K TD++V A L +
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCK---TDEMVSARKFLIDMASF 327
Query: 314 GITPDDRFCGCLLN 327
G+ P+ CL++
Sbjct: 328 GVVPNIFVYNCLID 341
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 140/335 (41%), Gaps = 53/335 (15%)
Query: 108 PNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + TLI G+F +++EM + P ++ Y L+ + R + +++
Sbjct: 191 PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESM 250
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT----------- 214
++ M ++G+ PN TY +++ Y + + + L +Y+EM G+ +V
Sbjct: 251 FRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCK 310
Query: 215 ------------------------LYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
+YN L+ G EA + +++ E PD +
Sbjct: 311 TDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE-ILPDVF 369
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T+S +I ++ EA+ + EM + GF PN +LI Y K + + +++
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEE--LGKLVECVEKSNSKLGYVVKLLLEEQDIEGDF 368
E GI P+ L++ + K E +G E V K G + ++ I+G F
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-----GLLPDVVAYTALIDGHF 484
Query: 369 KKEATELFNSISKDVKKA-------YCNCLID-LC 395
K T+ + K++++A +CLID LC
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ +I +GN D + ++E+MK G KP T+N L+ G+ + + +
Sbjct: 411 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 470
Query: 167 KEM-TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M D L PN T L++A+ R E+ ++ +M+ G++ V +NTL A
Sbjct: 471 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 530
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+G T A ++ +P+ T +++ GK+ EA F M E G PNLF
Sbjct: 531 IGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 590
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
V SLI+ + D V ++ + E G+ PD L+N
Sbjct: 591 VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMN 632
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 4/236 (1%)
Query: 86 RASKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
+ KL+E S D R+E + + + L++ + + N+ +M++ GVKP++
Sbjct: 459 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 518
Query: 144 ITYNNLLDTMGRAKRPWQVK-TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR 202
+T+N L R + I M N + PN T +++ Y E+ L +
Sbjct: 519 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 578
Query: 203 EMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR 262
MKE G+ ++ ++N+L+ ++ D E+ D+ +PD TFS+++ S
Sbjct: 579 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV-DLMEEFGVKPDVVTFSTLMNAWSSV 637
Query: 263 GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + E ++ +MLE G +P++ + L + Y +A + + LN++ + G+ P+
Sbjct: 638 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 693
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
L++ + RP + +I+ + + G P+ TY +L+ A R ++ LS+ ++++ G
Sbjct: 348 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 407
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
++ L+N ++ ++ G D+A +IFE MK S C+P + TF+++I GK+ E+
Sbjct: 408 LKPDTILFNAIINASSESGNLDQAMKIFEKMKES-GCKPTASTFNTLIKGYGKIGKLEES 466
Query: 269 EAMFNEML-EAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ + ML + +PN L+Q + ++ ++ + ++ G+ PD
Sbjct: 467 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 517
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G KP++ITY L+ + R K + ++ ++ NGL P+ + +++ A + +
Sbjct: 372 GHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 431
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ ++ +MKE G + + + +NTL+ +G +E+ + + M E QP+ T + ++
Sbjct: 432 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 491
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRT---DDVVRALNRLPELG 314
+ K+ EA + +M G +P++ +L + Y + T +D++ + R+
Sbjct: 492 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNK 549
Query: 315 ITPDDRFCGCLLNVMTQTPKEE 336
+ P+ R CG ++N + K E
Sbjct: 550 VKPNVRTCGTIVNGYCEEGKME 571
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R ++ + PN F++LIK + + DG V + M+ GVKP+++T++ L++
Sbjct: 579 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 638
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ + IY +M + G+ P+ + ++ L + Y RA E + +M++ G++ +V +Y
Sbjct: 639 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 698
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
+++ G +A ++++ M P+ T+ ++I
Sbjct: 699 QIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 737
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD---TMGRAKRPW 160
IDP+ AFS L K Y AG + + +M+ GV+PN++ Y ++ + G K+
Sbjct: 655 IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 714
Query: 161 QVKTIYKEMTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
QV YK+M GLSPN TY +L+ +G A+ + ++M+ K +
Sbjct: 715 QV---YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 761
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNN 148
EK+ + K+ + PN ++ +I + +AG + VY++M I G+ PN+ TY
Sbjct: 676 EKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYET 735
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
L+ G AK+PW+ + + K+M + P T
Sbjct: 736 LIWGFGEAKQPWKAEELLKDMEGKNVVPTRKT 767
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
RG+ EA ++FN ++E G +P+L T+L+ + + ++ ++++ + G+ PD
Sbjct: 355 RGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTIL 414
Query: 322 CGCLLNVMTQTPK-EELGKLVECVEKSNSK 350
++N +++ ++ K+ E +++S K
Sbjct: 415 FNAIINASSESGNLDQAMKIFEKMKESGCK 444
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 84 SPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKP 141
P AS S A E + P+A ++ LI+ AG + EM+ +G++P
Sbjct: 62 QPHASSDLAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRP 121
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+ YN LL+ + + +M D+G++ N TY LL AY RA ED+ V
Sbjct: 122 DAAHYNALLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVL 181
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
EMK +G+QL Y+TL+ + D G +A ++ +M+ + D ++ +I
Sbjct: 182 GEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQEL-GVELDVKIYNGLIDTFGK 240
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G++++A +F +M G +P++ +LI+ + + +R + E G+ PD +
Sbjct: 241 YGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKI 300
Query: 322 CGCLLNVMTQTPK-EELGKLVECVEKSNSK-LGYVVKLLLEEQDIEGDFKK 370
+++ + + K +EL KL + + K G V +L+ DI G + +
Sbjct: 301 FMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLV---DIYGQYGR 348
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 128/280 (45%), Gaps = 37/280 (13%)
Query: 75 KSYIWVNPKSPRASKLKEKSYDT-RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEE 133
++Y+ + RA +L++ + + ++D +STL++LY G + ++ E
Sbjct: 159 RTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIME 218
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+ +GV+ ++ YN L+DT G+ + + ++++M G+ P+ T+ +L+R + R
Sbjct: 219 MQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGN 278
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
+ L + M+E+GM ++ ++++ + G DE ++F+ M+ + + ++
Sbjct: 279 MKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMR-NRGLKESGAVYA 337
Query: 254 SMITICSCRGKVSEA--------------------------------EAMFN--EMLEA- 278
++ I G+ +A E N +++EA
Sbjct: 338 VLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAE 397
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G EPNL +L LI + A R + V + + G++PD
Sbjct: 398 GIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMSPD 437
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
+ R E + D ++ LI+ + GN L + M+ G+ P+ + +++ +G
Sbjct: 253 KMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQG 312
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
+ ++K ++ +M + GL + YA L+ YG+ D +K + + LS +++
Sbjct: 313 KWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFC 372
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L A G ++ + + M+ +E +P+ + +I S G+ EA A+F + +
Sbjct: 373 VLANAYAQQGLCEQTVNVLQLME-AEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKD 431
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+G P++ T+L++ + + ++ + V N + G TPD
Sbjct: 432 SGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPD 472
>gi|414881861|tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea mays]
Length = 642
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 4/262 (1%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
E+ + ++S+ K G + + L VY +K ++ ++ N++L + + R
Sbjct: 107 QEREMTNAASYSSYFKYLGLSRDPARVLRVYGAIKDRTLRVHVSVCNSVLGCLVKNGRLD 166
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG-EDTLSVYREMKEKGMQLSVTLYNTL 219
+Y EM GLSP+ TY++LL + + G + + EMK +G+Q+ + +Y TL
Sbjct: 167 SSFKLYDEMIREGLSPDPFTYSTLLAGCMKLKQGYTKAMGLINEMKSRGLQMDIVIYGTL 226
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
LA+CA Y +EA F+ MK E P+ + +SS++ S +AE + ++ +G
Sbjct: 227 LAICASHNYCEEAEVYFQKMK-DEGHSPNLFHYSSLLNAYSENSDYGKAELLMKDLRSSG 285
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
PN +LT+L++ Y K + L L G D+ L++ + + K +
Sbjct: 286 LTPNKVMLTTLLKVYSKGGLFEKAKGLLTELEASGFAQDEMPYCILIDGLVKGGKIQEAN 345
Query: 340 LV--ECVEKSNSKLGYVVKLLL 359
++ E EK GY +++
Sbjct: 346 ILFNEMKEKGVKSDGYAFSIMI 367
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 5/241 (2%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
N +Y++ +G ++ P +V +Y + D L + + S+L + + + +Y
Sbjct: 113 NAASYSSYFKYLGLSRDPARVLRVYGAIKDRTLRVHVSVCNSVLGCLVKNGRLDSSFKLY 172
Query: 202 REMKEKGMQLSVTLYNTLLAMCADV--GYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
EM +G+ Y+TLLA C + GYT +A + +MKS Q D + +++ IC
Sbjct: 173 DEMIREGLSPDPFTYSTLLAGCMKLKQGYT-KAMGLINEMKS-RGLQMDIVIYGTLLAIC 230
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ EAE F +M + G PNLF +SL+ Y + + L G+TP+
Sbjct: 231 ASHNYCEEAEVYFQKMKDEGHSPNLFHYSSLLNAYSENSDYGKAELLMKDLRSSGLTPNK 290
Query: 320 RFCGCLLNVMTQTPKEELGK-LVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNS 378
LL V ++ E K L+ +E S + +L + ++G +EA LFN
Sbjct: 291 VMLTTLLKVYSKGGLFEKAKGLLTELEASGFAQDEMPYCILIDGLVKGGKIQEANILFNE 350
Query: 379 I 379
+
Sbjct: 351 M 351
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 1/220 (0%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
++ ++D + TL+ + + + +++MK G PN+ Y++LL+
Sbjct: 212 KSRGLQMDIVIYGTLLAICASHNYCEEAEVYFQKMKDEGHSPNLFHYSSLLNAYSENSDY 271
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + + K++ +GL+PN +LL+ Y + E + E++ G Y L
Sbjct: 272 GKAELLMKDLRSSGLTPNKVMLTTLLKVYSKGGLFEKAKGLLTELEASGFAQDEMPYCIL 331
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G EA +F +MK + + D + FS MI+ G E++ + E
Sbjct: 332 IDGLVKGGKIQEANILFNEMK-EKGVKSDGYAFSIMISALHRGGHHQESKQLAKEFESEN 390
Query: 280 FEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+L +L + ++ Y + V+R L ++ E I+PD+
Sbjct: 391 ASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDESNISPDN 430
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 61/137 (44%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D AFS +I G+ + +E ++ +++ N L T V +
Sbjct: 359 DGYAFSIMISALHRGGHHQESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRML 418
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
K+M ++ +SP+ T+ +L+R + A+ +M KG QL+ L + ++
Sbjct: 419 KKMDESNISPDNITFNTLIRYFCNAKVCHLAYKTVEDMHAKGHQLNEELCSHVMVQLGKA 478
Query: 227 GYTDEAFEIFEDMKSSE 243
G+ EAF ++ ++ S+
Sbjct: 479 GFPSEAFSVYNMLRYSK 495
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 156/355 (43%), Gaps = 63/355 (17%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
+I P+ ++TLI+ +G G N++ EM + G+KP+ +TY L+D +A
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGE-DTLS-VYREMKEKGMQLSVTLYNTLL 220
+++ EM G++PN TY +L+ G ++GE DT + + EM++KG+QL+V +YN+++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALID--GLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
G ++A ++ ++M+ + PD+ T++++I G + +A + EML+ G
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVA-GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALN-------------------------------- 308
+P + L+ + +D R L
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629
Query: 309 ---RLPELGITPDDRFCGCLL--NVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQD 363
R+ G+ PD L+ + + KE E +EK GYV +
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK-----GYVPTVTSYNAL 684
Query: 364 IEGDFKK----EATELFNSISKDVKKA---YCNCLIDLC-------VNLNLLENA 404
I+ +KK EA ELF + A N +D+C + LNL + A
Sbjct: 685 IKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEA 739
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI + G+ ++EM + + P+ ITY L+ G+ + + + ++
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLF 421
Query: 167 KEMTDNGLSPNWNTYASLLRAY---------------------------------GRARY 193
EM GL P+ TY +L+ Y G ++
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481
Query: 194 GE-DTLS-VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
GE DT + + EM++KG+QL+V +YN+++ G ++A ++ ++M+ + PD+ T
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA-GIDPDAIT 540
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++++I G + +A + EML+ G +P + L+ + +D R L +
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600
Query: 312 ELGITPD 318
E GI PD
Sbjct: 601 EKGIVPD 607
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ST+I Y G L + ++M+ G+KPN TYN+++ + + + ++ + +
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + P+ Y +L+ + + + + EM K + Y TL+
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G E +F +M S +PD T++++I + G++ A ++ NEM++ G PN+
Sbjct: 412 GKVIEPQNLFHEM-ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+LI K D L+ + + G+
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGL 499
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Query: 141 PNMITYNNLLD---TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
P++++Y+ ++D +G K+ + + +M GL PN TY S++ + +
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALK---LMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA 347
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
V REM + + +Y TL+ +G+ A + F++M S+ PD T++++I
Sbjct: 348 EKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQ 406
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
GKV E + +F+EM+ G +P+ T+LI Y KA + N + ++G+TP
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 318 DDRFCGCLLN 327
+ G L++
Sbjct: 467 NIVTYGALID 476
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 135/300 (45%), Gaps = 15/300 (5%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
NAF + I A N +G + G+ N +YN ++ ++ R + + + +
Sbjct: 229 NAFLSRI-----ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQ 283
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M +P+ +Y++++ Y + L + +M+ KG++ + YN+++ + +G
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ EA ++ +M S+ PD+ ++++I G V A F+EML P+ T
Sbjct: 344 SFEAEKVLREM-MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYT 402
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
+LIQ +G+ + + + + G+ PD+ L++V + G++V N
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA-----GEMVNAFSLHN 457
Query: 349 S--KLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACK 406
++G ++ I+G K + N + +++K +++C+ +++ CK
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK--GLQLNVCIYNSMVNGICK 515
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R RN+ D N ++ LIK + A N +Y+EM G P + +YN L+ + +
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKR 692
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTY 181
+ + + +++EM +GL + Y
Sbjct: 693 KFXEARELFEEMRGHGLVADGEIY 716
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 93 KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
+S TR +D +F+T+I LY G + V E M+ GVK +++T+N+L+
Sbjct: 200 ESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHG 259
Query: 153 MGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLS 212
+ + +R + + +EM G++P+ TY +L+ Y RA E+ + + EM+ GM
Sbjct: 260 LCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPG 319
Query: 213 VTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMF 272
V YN +L + G E + +M Q D T +++I RG ++ A +
Sbjct: 320 VATYNAILRKLCEDGKMKEVNVLLNEM-DERKVQADHVTCNTLINAYCKRGDMTSALKVK 378
Query: 273 NEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
M+E+G + + F +L+ + KA+ D+ AL + G +P+
Sbjct: 379 RRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPN 424
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L V++ M+A V P+ + LL + +++ + ++ +MT G++ N + Y ++L
Sbjct: 130 LRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHV 189
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+A S+ M G+ L +NT++A+ G EA + E M+ ++ +
Sbjct: 190 CLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERME-NQGVKA 248
Query: 248 DSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
D T++S+I +C R +V EA + EM AG P+ T+L+ Y +A ++ V+
Sbjct: 249 DVVTWNSLIHGLCKER-RVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKL 307
Query: 307 LNRLPELGITP 317
+ +G+ P
Sbjct: 308 RGEMEAMGMLP 318
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 100/254 (39%), Gaps = 36/254 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TL+ Y AG+ + + + EM+A+G+ P + TYN +L + + +V +
Sbjct: 284 DHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLL 343
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + + + T +L+ AY + L V R M E G+QL Y L+
Sbjct: 344 NEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKA 403
Query: 227 GYTDEAFE-IFEDMKSS---------------------------------ENCQPDSWTF 252
DEA E +FE M + PD +
Sbjct: 404 KELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVY 463
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP- 311
S+I +G + A +FNEM G E + V +L Y A + + LN +
Sbjct: 464 RSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAK 523
Query: 312 -ELGITPDDRFCGC 324
+L ITP C C
Sbjct: 524 KQLYITPQIYNCMC 537
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 99/233 (42%), Gaps = 2/233 (0%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMIT 145
R + K +D R ++ + ++ ++ + AG+ ++ M A GV + +
Sbjct: 159 RMTATARKVFDQMTR-AGVAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFS 217
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+N ++ R ++ + + M + G+ + T+ SL+ + R ++ + REM
Sbjct: 218 FNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMA 277
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
G+ Y TL+ G +EA ++ +M++ P T+++++ GK+
Sbjct: 278 MAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAM-GMLPGVATYNAILRKLCEDGKM 336
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
E + NEM E + + +LI Y K ++ R+ E G+ D
Sbjct: 337 KEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLD 389
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
K + D +TLI Y G+ L V M G++ + TY L+ +AK +
Sbjct: 349 RKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDE 408
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
K EM G SPN++ + ++ L++ E+ ++G +Y +L+
Sbjct: 409 AKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIR 468
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
G+ D A +F +M+ + + D ++++ GK A + NEM
Sbjct: 469 RLCKKGFIDLAGNVFNEMQ-GKGLEADCLVYATLACAYLTAGKPVAALDILNEM 521
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 1/220 (0%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K + + +D + TLI G + +EM+ VKPN++ YN ++
Sbjct: 172 KAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMII 231
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
D+ + + + + +Y ++ D G+ P+ TY SL+R + R + + EM K +
Sbjct: 232 DSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNIN 291
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+V +N L+ G EA +F M QPD TF+++I+ G V EA
Sbjct: 292 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQ-QPDIVTFNTLISGHCLHGNVLEARK 350
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
+F+ + E G P+++ T LI Y K +R D+ V N +
Sbjct: 351 LFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEM 390
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I+PN F+ LI + G ++ M G +P+++T+N L+ + +
Sbjct: 290 INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 349
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + + G+ P+ +Y L+ Y + + ++ +S++ EM+ K M L + LY++L+
Sbjct: 350 KLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G A+E+F + +++ P+ T++ +I + +F M G P
Sbjct: 410 CKSGRISYAWELFSTI-NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 468
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI Y K++R + + L+ + + PD
Sbjct: 469 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPD 503
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 89 KLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
+L K+ D + IDP+ +++LI+ + G + + EM + PN+ T+
Sbjct: 238 ELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTF 297
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
N L+D R + + + ++ M G P+ T+ +L+ + + ++ + E
Sbjct: 298 NVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFE 357
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
+G+ V Y L+ DEA +F +M+ +N D +SS+I G++S
Sbjct: 358 RGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRC-KNMVLDIVLYSSLIDGLCKSGRIS 416
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
A +F+ + G PN+ LI + K Q D + + G+TP
Sbjct: 417 YAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTP 467
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 12/215 (5%)
Query: 87 ASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
A KL + ++ + W +++ LI Y D ++++ EM+ + +++ Y
Sbjct: 348 ARKLFDTVFERGILPDVW-----SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLY 402
Query: 147 NNLLDTM---GRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
++L+D + GR W+ ++ + ++G PN TY L+ A+ + + + + +++
Sbjct: 403 SSLIDGLCKSGRISYAWE---LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKL 459
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M KG+ +V YN L+ EA + M+ S+N PDS T++S+ G
Sbjct: 460 MCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ-SKNLAPDSITYNSLFDGLCKSG 518
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
++S+A +F M G ++ L+ + KAQ
Sbjct: 519 RISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/216 (18%), Positives = 89/216 (41%), Gaps = 5/216 (2%)
Query: 106 IDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+ F S I Y G +V + G +PN IT ++ + +
Sbjct: 115 VTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAM 174
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
+ + G+ + Y +L+ + D + +EM+ + ++ ++ +YN ++ +
Sbjct: 175 DFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSF 234
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C D T +A +++ + PD T++S+I G+ E + + EM+ P
Sbjct: 235 CKD-ELTCKARDLYLKI-VDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINP 292
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N++ LI + + + + N + + G PD
Sbjct: 293 NVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPD 328
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A++E + D +++T+I G AG D +++EM G P++ TYN L+ + +
Sbjct: 263 AKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGN 322
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
T++ +M PN TY L+R + + + MK +G + V YN
Sbjct: 323 VEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNV 382
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK---VSEAEAMFNEM 275
L+ + G ++A +FE M E+C P+ T++ +I+ R + ++ A M EM
Sbjct: 383 LIRYSFEEGEIEKALCLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEM 442
Query: 276 LEAGFEPNLFVLTSL---IQCYGKAQRTDDVVR 305
+E G+ P F+L + + G Q + D++R
Sbjct: 443 VERGYLPRRFMLNRVLNGLMLTGNQQISRDLLR 475
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P+++TYN L D RAK + + ++M ++G++P TY +L+ + RA + +
Sbjct: 195 PDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNF 254
Query: 201 YREMKEKGM-----QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+ +MK++G + + Y T++ G D+A ++F++M S E C P T++++
Sbjct: 255 FLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEM-SKEGCTPSVATYNAL 313
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I + +G V +A +F++M+ + PN+ T LI+ + D ++ + R+ G
Sbjct: 314 IQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGC 373
Query: 316 TP 317
P
Sbjct: 374 EP 375
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
+N+LLD +G+++ + ++ + + + P+ TY +L + RA+ L + R+M
Sbjct: 166 FNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMA 224
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS----SENCQPDSWTFSSMITICSC 261
E G+ + T YN +L G A+ F MK E+C+PD +++++I
Sbjct: 225 ESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGV 284
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
G++ +A +F+EM + G P++ +LIQ K +D V
Sbjct: 285 AGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAV 327
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 12/276 (4%)
Query: 120 TAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWN 179
TA D + V M GV P+ +TYN++L + +P + K+M +G+ PN
Sbjct: 221 TAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 280
Query: 180 TYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
TY+SL+ + + ++ M ++G++ + Y TLL G E+ ++F D+
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF-DL 339
Query: 240 KSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
+PD T++++I C GK+ EA + M+ G +P++ +LI Y + R
Sbjct: 340 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 399
Query: 300 TDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK-LVECVEKSNSKLGYVVKLL 358
DD + + G++P+ +L + T + K L + KS ++L +
Sbjct: 400 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 459
Query: 359 LEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDL 394
+ + + EA +F ++ CL DL
Sbjct: 460 ILHGLCKNNLTDEALRMFQNL----------CLTDL 485
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++++ Y ++G + ++M++ GV+PN++TY++L++ + + R + + I+
Sbjct: 243 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 302
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
MT GL P+ TY +LL+ + + ++ ++ M G++ + YNTL+ C
Sbjct: 303 DSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 362
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLF 285
G DEA ++ M S +PD T+ ++I CR ++ +A A+F EM+ +G PN+
Sbjct: 363 GKMDEATKLLASMVSV-GVKPDIVTYGTLIN-GYCRVSRMDDALALFKEMVSSGVSPNII 420
Query: 286 VLTSLIQCYGKAQRT 300
++Q +RT
Sbjct: 421 TYNIILQGLFHTRRT 435
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
EK +D R + D ++TLI AG D + M ++GVKP+++TY L++
Sbjct: 334 EKLFDLMVR-IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 392
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
R R ++KEM +G+SPN TY +L+ R +Y + + G QL
Sbjct: 393 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 452
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
++ YN +L TDEA +F+++ ++ Q ++ TF+ MI G++ EA+ +
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKCGRMDEAKDL 511
Query: 272 FNEMLEAGFEPNL----FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
F G P++ + +LI+ G + DD+ ++ E G + D R ++
Sbjct: 512 FAAHSANGLVPDVRTYSLMAENLIE-QGSLEELDDLFLSME---ENGCSADSRMLNSIVR 567
Query: 328 VMTQ 331
+ Q
Sbjct: 568 KLLQ 571
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 18/318 (5%)
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
P+ T SS +Y+ N +S A K+ +D+ + D + TL++ + G
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKI----FDSMTK-RGLEPDIATYRTLLQGHCKEGRVI 331
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
+++ M IGVKP++ITYN L+D A + + + M G+ P+ TY +L+
Sbjct: 332 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 391
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y R +D L++++EM G+ ++ YN +L T A E++ + S
Sbjct: 392 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS-GT 450
Query: 246 QPDSWTFSSMITICSCRGKVS-EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVV 304
Q + T+ ++I C+ ++ EA MF + + +I K R D+
Sbjct: 451 QLELSTY-NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 509
Query: 305 RALNRLPELGITPDDRFCGCLL-NVMTQTPKEELGKLVECVEKSNSK-----LGYVVKLL 358
G+ PD R + N++ Q EEL L +E++ L +V+ L
Sbjct: 510 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 569
Query: 359 LEEQDIEGDFKKEATELF 376
L+ GD + T LF
Sbjct: 570 LQ----RGDITRAGTYLF 583
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 52/343 (15%)
Query: 95 YDTRARNEKWRIDP--NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDT 152
Y+ AR ++ P + ++ LI AG D + G + + IT+ LL
Sbjct: 77 YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136
Query: 153 MGRAKRPWQ-VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK---G 208
+ KR + + + MT+ G P+ +Y +LL+ ++ L + M + G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196
Query: 209 MQLSVTLYNTLLAMCADVGY--------TDEAFEIFEDMKSSENCQPDSWTFSSMITICS 260
V YNT+L G D+A E+ M + PD T++S++
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYC 255
Query: 261 CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR 320
G+ EA +M G EPN+ +SL+ K R+ + + + + + G+ PD
Sbjct: 256 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315
Query: 321 FCGCLLNVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSIS 380
LL + + K G V+ E+ +LF+ +
Sbjct: 316 TYRTLL-------------------QGHCKEGRVI---------------ESEKLFDLMV 341
Query: 381 K-DVKKAYC--NCLIDLCVNLNLLENACKLLELGLTLEVYTDI 420
+ VK N LID C ++ A KLL +++ V DI
Sbjct: 342 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 384
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 98/229 (42%), Gaps = 19/229 (8%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG---LSPNWNTYASLL 185
+V++E+ G ++ N L + R P + Y M G ++P +TYA L+
Sbjct: 41 HVFDELLRRGRGASIYGLNRALADVAR-HSPAAAVSRYNRMARAGAGKVTPTVHTYAILI 99
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSEN 244
RA + + + +KG ++ + LL +CAD T +A +I +
Sbjct: 100 GCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCAD-KRTSDAMDIVLRRMTELG 158
Query: 245 CQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE---AGFEPNLFVLTSLIQCYGK----- 296
C PD +++++++ + EA + + M + G P++ +++ + K
Sbjct: 159 CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQT 218
Query: 297 ---AQRTDDVVRALNRLPELGITPDDRFCGCLLN--VMTQTPKEELGKL 340
AQ D + LN + + G+ PD +L+ + PKE +G L
Sbjct: 219 KLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 10/219 (4%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNV-YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV- 162
+PN F+TLI Y + G D V +E M ++G P++ TYN L+ +G K+ + V
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLI--LGLCKKGYLVS 407
Query: 163 -KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL- 220
+ + EM G PN TY L+ + + E+ +V EM KG+ L+ YN L+
Sbjct: 408 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 467
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
A+C D D A +F DM SS+ C+PD +TF+S+I K EA ++ +ML G
Sbjct: 468 ALCKDEKVQD-ALNMFGDM-SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 525
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
N +LI + + + ++ +N + G DD
Sbjct: 526 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 564
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 3/232 (1%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN ++ LI + G + NV +EM G+ N + YN L+ + + ++
Sbjct: 421 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 480
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M+ G P+ T+ SL+ + E+ L +Y++M +G+ + YNTL+
Sbjct: 481 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 540
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA ++ DM C D T++ +I G + + A+F +M+ G PN
Sbjct: 541 RRGAMQEALKLVNDM-LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 599
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
LI + + L + G+TPD L+N + +T + +
Sbjct: 600 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 651
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI G + EM+ G +PN+ITY L+D + R + + +
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM+ GL+ N Y L+ A + +D L+++ +M KG + + +N+L+ V
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA +++DM E ++ T++++I RG + EA + N+ML G +
Sbjct: 508 NKFEEALGLYQDM-LLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 566
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI+ +A + + + G+ P++ C L+N + +T
Sbjct: 567 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 612
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 130/308 (42%), Gaps = 23/308 (7%)
Query: 40 SLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIW---------VNPKSPRASKL 90
+ + +V L + N K N Y G SP Y + VN + L
Sbjct: 181 TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALL 240
Query: 91 KEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNN 148
K+ + + PNA + TLI G + L + EEM +G P++ T+N+
Sbjct: 241 KDMT--------RHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292
Query: 149 LLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKG 208
+ + + R + + M G +PN TY L+ +G R G+ + R + K
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLM--HGLCRMGK--VDEARMLLNKV 348
Query: 209 MQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
+V L+NTL+ G DEA + + S C PD +T++++I +G + A
Sbjct: 349 PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 408
Query: 269 EAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+ NEM G EPN+ T LI + K R ++ L+ + G+ + CL++
Sbjct: 409 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISA 468
Query: 329 MTQTPKEE 336
+ + K +
Sbjct: 469 LCKDEKVQ 476
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++LI F+ L +Y++M GV N ITYN L+ R + +
Sbjct: 493 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 552
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M G + TY L++A RA E L+++ +M KG+ + N L+
Sbjct: 553 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 612
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G A E DM PD T++S+I G+ EA +F+++ G P+
Sbjct: 613 GNIQHALEFLRDM-IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 671
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + K DD L+R + G P++
Sbjct: 672 YNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 704
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F ++K YG AG + +M+ + +P +YN +LD + P V ++ EM
Sbjct: 149 FILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM 208
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+SP T+ +++A + ++ ++M G + +Y TL+ VG
Sbjct: 209 LSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRV 268
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+E + C PD TF+ I ++ EA + + ML GF PN F
Sbjct: 269 NEV-LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 327
Query: 290 LIQCYGKAQRTDDVVRALNRLP 311
L+ + + D+ LN++P
Sbjct: 328 LMHGLCRMGKVDEARMLLNKVP 349
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LIK AGN + L ++E+M + G+ PN I+ N L++ + R
Sbjct: 562 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 621
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M GL+P+ TY SL+ + ++ L+++ +++ +G+ YNTL++
Sbjct: 622 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 681
Query: 226 VGYTDEA 232
G D+A
Sbjct: 682 EGMFDDA 688
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 108/261 (41%), Gaps = 9/261 (3%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + LI G AG F + +MK G+ + ++ GRA P Q + +
Sbjct: 112 DVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 171
Query: 169 MTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M P + +Y +L + +V+ EM KG+ +V + ++ V
Sbjct: 172 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 231
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A + +DM + C P++ + ++I G+V+E + EML G P++
Sbjct: 232 EVDSACALLKDM-TRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTF 290
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK 346
I K R + + ++R+ G TP+ G L++ + + K +E L+ V
Sbjct: 291 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 350
Query: 347 SNSKL------GYVVKLLLEE 361
N L GYV + L+E
Sbjct: 351 PNVVLFNTLINGYVSRGRLDE 371
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/149 (17%), Positives = 59/149 (39%)
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
T G ++ Y L+ G A + ++ +MK++G+ +L+ ++ G
Sbjct: 103 TQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLP 162
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A + DM+ +C+P +++ ++ + +F EML G P ++
Sbjct: 163 GQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 222
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ D L + G P+
Sbjct: 223 VMKALCLVNEVDSACALLKDMTRHGCVPN 251
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+T I + G + + ++ +M+ GV PN++T+N ++D +G R +
Sbjct: 248 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 307
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G+ P TY+ L++ RA+ D V +EM +KG +V +YN L+ +
Sbjct: 308 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 367
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A EI +D+ S+ S T++++I G+ AE + EML GF N
Sbjct: 368 GSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 426
Query: 287 LTSLI 291
TS+I
Sbjct: 427 FTSVI 431
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI + + +++ K G+ P++ TY+ ++D +A+R + + +
Sbjct: 563 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 622
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + PN Y L+RAY R+ L + +MK KG+ + Y +L+ + +
Sbjct: 623 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 682
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA +FE+M+ E +P+ + ++++I G++ + E + EM PN
Sbjct: 683 SRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 741
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T +I Y + + R LN + E GI PD
Sbjct: 742 YTVMIGGYARDGNVTEASRLLNEMREKGIVPD 773
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
++EM + V+PN + YN+L+ R+ R + ++M G+SPN TY SL++
Sbjct: 622 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 681
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
E+ ++ EM+ +G++ +V Y L+ +G + + +M S +N P+
Sbjct: 682 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS-KNVHPNKI 740
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
T++ MI + G V+EA + NEM E G P+ I Y K
Sbjct: 741 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 786
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 34/252 (13%)
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
N+ + +D + L+ AG D + +E+ G + ++YN L+ K+
Sbjct: 487 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 546
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ EM GL P+ TY+ L+ E+ + + + K GM V Y+ ++
Sbjct: 547 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 606
Query: 221 AMCADVGYTDEAFEIFEDMKSS----------------------------------ENCQ 246
C T+E E F++M S +
Sbjct: 607 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 666
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
P+S T++S+I S +V EA+ +F EM G EPN+F T+LI YGK + V
Sbjct: 667 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 726
Query: 307 LNRLPELGITPD 318
L + + P+
Sbjct: 727 LREMHSKNVHPN 738
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ LI+ Y +G L + E+MK G+ PN TY +L+ M R + K
Sbjct: 630 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 689
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++EM GL PN Y +L+ YG+ + REM K + + Y ++
Sbjct: 690 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 749
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEA 268
A G EA + +M+ + PDS T+ I +G V EA
Sbjct: 750 ARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGYLKQGGVLEA 793
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 5/187 (2%)
Query: 114 LIKLYGTAGNFDGC---LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
LI++Y T DGC L+V+ + G+ P+ T N LL ++ RA + + ++
Sbjct: 183 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVV 241
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+SP+ + + + A+ + E+ + ++ +M+E G+ +V +NT++ G D
Sbjct: 242 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 301
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EAF +F++ +P T+S ++ + ++ +A + EM + GF PN+ V +L
Sbjct: 302 EAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 360
Query: 291 IQCYGKA 297
I + +A
Sbjct: 361 IDSFIEA 367
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 105/272 (38%), Gaps = 34/272 (12%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ ++ +F+++I L + FD L EM + P L+ + + + +
Sbjct: 420 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 479
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ + + G + T +LL A ++ + +E+ +G + YNTL++ C
Sbjct: 480 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 539
Query: 224 ADVGYTDEAFEIFEDM-----------------------KSSENCQ-----------PDS 249
DEAF ++M K E Q PD
Sbjct: 540 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 599
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+T+S MI C + E + F+EM+ +PN V LI+ Y ++ R +
Sbjct: 600 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 659
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ GI+P+ L+ M+ + E KL+
Sbjct: 660 MKHKGISPNSATYTSLIKGMSIISRVEEAKLL 691
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S L+K A V +EM G PN+I YNNL+D+ A + I M
Sbjct: 322 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 381
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GLS +TY +L++ Y + ++ + +EM G ++ + +++ + D
Sbjct: 382 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 441
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A +M N P +++I+ GK S+A ++ + L GF + +L
Sbjct: 442 SALRFVGEM-LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 500
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +A + D+ R + G D
Sbjct: 501 LHGLCEAGKLDEAFRIQKEILGRGCVMD 528
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN+ +++LIK + ++EEM+ G++PN+ Y L+D G+ + +V+
Sbjct: 665 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 724
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +EM + PN TY ++ Y R + + EM+EKG+ Y +
Sbjct: 725 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 784
Query: 224 ADVGYTDEAFE 234
G EAF+
Sbjct: 785 LKQGGVLEAFK 795
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ + + G+ P+ T LL + RA + + ++ KG+ V L+ T +
Sbjct: 202 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFC 260
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +EA ++F M+ + P+ TF+++I G+ EA +M+E G EP L
Sbjct: 261 KGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTL 319
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ L++ +A+R D L + + G P+
Sbjct: 320 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 353
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 197 TLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI 256
L V+ + KGM S T N LL + E F+ + + PD + F++ I
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAI 256
Query: 257 TICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGIT 316
GKV EA +F++M EAG PN+ ++I G R D+ ++ E G+
Sbjct: 257 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 316
Query: 317 P 317
P
Sbjct: 317 P 317
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 10/219 (4%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNV-YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV- 162
+PN F+TLI Y + G D V +E M ++G P++ TYN L+ +G K+ + V
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLI--LGLCKKGYLVS 425
Query: 163 -KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL- 220
+ + EM G PN TY L+ + + E+ +V EM KG+ L+ YN L+
Sbjct: 426 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 485
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
A+C D D A +F DM SS+ C+PD +TF+S+I K EA ++ +ML G
Sbjct: 486 ALCKDEKVQD-ALNMFGDM-SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
N +LI + + + ++ +N + G DD
Sbjct: 544 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 582
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 3/232 (1%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN ++ LI + G + NV +EM G+ N + YN L+ + + ++
Sbjct: 439 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 498
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M+ G P+ T+ SL+ + E+ L +Y++M +G+ + YNTL+
Sbjct: 499 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 558
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA ++ DM C D T++ +I G + + A+F +M+ G PN
Sbjct: 559 RRGAMQEALKLVNDM-LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 617
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
LI + + L + G+TPD L+N + +T + +
Sbjct: 618 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 669
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++TLI G + EM+ G +PN+ITY L+D + R + + +
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM+ GL+ N Y L+ A + +D L+++ +M KG + + +N+L+ V
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
+EA +++DM E ++ T++++I RG + EA + N+ML G +
Sbjct: 526 NKFEEALGLYQDM-LLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 584
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQT 332
LI+ +A + + + G+ P++ C L+N + +T
Sbjct: 585 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 630
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 24/318 (7%)
Query: 31 DSLSFYS-KTSLQKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIW---------V 80
D YS + + + +V L + N K N Y G SP Y + V
Sbjct: 189 DMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLV 248
Query: 81 NPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIG 138
N + LK+ + + PNA + TLI G + L + EEM +G
Sbjct: 249 NEVDSACALLKDMT--------RHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMG 300
Query: 139 VKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTL 198
P++ T+N+ + + + R + + M G +PN TY L+ +G R G+ +
Sbjct: 301 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLM--HGLCRMGK--V 356
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
R + K +V L+NTL+ G DEA + + S C PD +T++++I
Sbjct: 357 DEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+G + A + NEM G EPN+ T LI + K R ++ L+ + G+ +
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476
Query: 319 DRFCGCLLNVMTQTPKEE 336
CL++ + + K +
Sbjct: 477 AVGYNCLISALCKDEKVQ 494
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++LI F+ L +Y++M GV N ITYN L+ R + +
Sbjct: 511 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 570
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M G + TY L++A RA E L+++ +M KG+ + N L+
Sbjct: 571 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 630
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G A E DM PD T++S+I G+ EA +F+++ G P+
Sbjct: 631 GNIQHALEFLRDM-IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAIT 689
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+LI + K DD L+R + G P++
Sbjct: 690 YNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 722
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 2/202 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
F ++K YG AG + +M+ + +P +YN +LD + P V ++ EM
Sbjct: 167 FILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM 226
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+SP T+ +++A + ++ ++M G + +Y TL+ + VG
Sbjct: 227 LSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRV 286
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+E + C PD TF+ I ++ EA + + ML GF PN F
Sbjct: 287 NEV-LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 345
Query: 290 LIQCYGKAQRTDDVVRALNRLP 311
L+ + + D+ LN++P
Sbjct: 346 LMHGLCRMGKVDEARMLLNKVP 367
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++ LIK AGN + L ++E+M + G+ PN I+ N L++ + R
Sbjct: 580 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 639
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
++M GL+P+ TY SL+ + ++ L+++ +++ +G+ YNTL++
Sbjct: 640 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 699
Query: 226 VGYTDEA 232
G D+A
Sbjct: 700 EGMFDDA 706
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 9/261 (3%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ + LI G AG F + +MK G+ + ++ GRA P Q + +
Sbjct: 130 DVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 189
Query: 169 MTD-NGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M P + +Y +L + +V+ EM KG+ +V + ++ V
Sbjct: 190 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 249
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
D A + +DM + C P++ + ++I S G+V+E + EML G P++
Sbjct: 250 EVDSACALLKDM-TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTF 308
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVEK 346
I K R + + ++R+ G TP+ G L++ + + K +E L+ V
Sbjct: 309 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 368
Query: 347 SNSKL------GYVVKLLLEE 361
N L GYV + L+E
Sbjct: 369 PNVVLFNTLINGYVSRGRLDE 389
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/149 (18%), Positives = 60/149 (40%)
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
T G ++ Y L+ G A + T ++ +MK++G+ +L+ ++ G
Sbjct: 121 TQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLP 180
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
+A + DM+ +C+P +++ ++ + +F EML G P ++
Sbjct: 181 GQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 240
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
+++ D L + G P+
Sbjct: 241 VMKALCLVNEVDSACALLKDMTRHGCVPN 269
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%), Gaps = 2/232 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ + F +++ Y A + +E+M G+K + YN L+DT+ ++K+ + + I
Sbjct: 193 LSKDTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAI 252
Query: 166 YKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
YKEM G P+ TY L+ +G + ++Y+EM + G++ V Y L++
Sbjct: 253 YKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFC 312
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G DEA ++F +M++S C P + +I ++ EA F ++GF +
Sbjct: 313 KSGKCDEAIKVFYEMEAS-GCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEV 371
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
+++ Y +A + + ++ + + + P+ R +L+ + ++ K E
Sbjct: 372 PTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFE 423
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 109/253 (43%), Gaps = 3/253 (1%)
Query: 77 YIWVNPKSPRASKLKEKS--YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEM 134
Y W+ ++ ++K+ Y R K+ D ++ L++ +G + +Y+EM
Sbjct: 233 YNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEM 292
Query: 135 KAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYG 194
G++P+++ Y L+ ++ + + ++ EM +G P+ + Y L+ G
Sbjct: 293 IDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERL 352
Query: 195 EDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSS 254
++ L + K+ G + V N ++ AF++ ++M+ + P+S T+
Sbjct: 353 DEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCK-VGPNSRTYDV 411
Query: 255 MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELG 314
++ K EA +F M G EP L T ++ + R D ++ ++ E G
Sbjct: 412 ILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKG 471
Query: 315 ITPDDRFCGCLLN 327
+ P L+N
Sbjct: 472 VLPCMHMFSALIN 484
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D A+ LI + +G D + V+ EM+A G P+ Y L++ +G +R +
Sbjct: 298 RPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALK 357
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +G T +++ AY RA + + EM++ + + Y+ +L
Sbjct: 358 YFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLI 417
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+EA+ IF+ M + C+P T++ M+ + G+V A ++ +M E G P +
Sbjct: 418 KSQKFEEAYNIFQRM-GIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCM 476
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLV 341
+ ++LI R ++ + + GI P + L + Q + L + V
Sbjct: 477 HMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGGRISLAQEV 533
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 86 RASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNM 143
RASK + ++ K ++ PN+ + ++ + F+ N+++ M G +P +
Sbjct: 383 RASKFQH-AFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQL 441
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
TY ++ R ++K+M + G+ P + +++L+ E+ ++E
Sbjct: 442 NTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQE 501
Query: 204 MKEKGMQLSVTLYNTL 219
M +KG++ L++ L
Sbjct: 502 MLDKGIRPPGQLFSNL 517
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ ++ + +S LI G + ++++ +M G KPN++ Y+ L+D + R +P + K
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I M +G PN TY+SL++ + + E+ + V++EM + G + Y+ L+
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML---EAGF 280
VG EA ++ M + +PD+ +SS+I G + A +++EML E
Sbjct: 478 CGVGRVKEAMMVWSKMLTI-GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKL 340
+P++ L+ + V LN + + G PD C LN +++
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS----- 591
Query: 341 VECVEKSNSKLGYVVKLLLEEQDIEG 366
+K S L +V LL+ Q + G
Sbjct: 592 ---CDKGRSFLEELVVRLLKRQRVSG 614
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++TLI G D +++ E M + PN +TY L++ + + +R +
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
M + G N + Y+ L+ + E+ +S++R+M EKG + ++ +Y+ L+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +EA EI M +S C P+++T+SS++ G EA ++ EM + G N F
Sbjct: 410 EGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI R + + +++ +GI PD
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 108 PNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYK 167
P ++ LI G+ + + M G PN +TYN L+ + + + ++ +
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
M + PN TY +L+ + R D + + M+E+G L+ +Y+ L++ G
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 376
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+EA ++ M + + C+P+ +S ++ GK +EA+ + N M+ +G PN +
Sbjct: 377 KAEEAMSLWRKM-AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFC 322
+SL++ + K ++ V+ + + G + ++FC
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCS-RNKFC 469
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 3/220 (1%)
Query: 101 NEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
N I PN +F+ +IK D + V+ M P+ TY L+D + + +R
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEER 237
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ + EM G SP+ Y L+ + + M KG + YNT
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ G D+A + E M SS+ C P+ T+ ++I + + ++A + + M E
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSK-CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G+ N + + LI K + ++ + ++ E G P+
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPN 396
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 94 SYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
++D + I PN +S LI + G ++++ ++ +KP+ T+N L+D
Sbjct: 96 AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 155
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ ++ + KT++ M G+ P+ TY SL+ Y + S++ M + G+
Sbjct: 156 GFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNP 215
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
+ YN L+ + D+A +F +M +N P+ T++S+I S G++S A +
Sbjct: 216 DIRSYNILINGFCKIKKVDKAMNLFNEM-HCKNIIPNVVTYNSLIDGLSKSGRISYALQL 274
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
++M + G PN+ S+I K + D + + + + GI P
Sbjct: 275 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP 320
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 5/232 (2%)
Query: 108 PNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN + TLIK G ++++ A+G + ++Y L+ + + +
Sbjct: 5 PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ + + N Y +++ + ++ D +Y EM KG+ +V Y+ L++
Sbjct: 65 LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
VG +A ++F + EN +PD +TF+ ++ C R K+ E + +F M++ G P++
Sbjct: 125 VGKLKDAIDLFNKI-ILENIKPDGYTFNILVDGFCKDR-KMKEGKTVFAMMMKQGIIPDV 182
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE 336
SL+ Y + + N + + G+ PD R L+N + K +
Sbjct: 183 VTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVD 234
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++ LI + D +N++ EM + PN++TYN+L+D + ++ R +
Sbjct: 216 DIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLV 275
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M D G+ PN TY S++ A + + +++ + K++G+Q S+ Y L+
Sbjct: 276 DQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKG 335
Query: 227 GYTDEAFEIFEDM 239
G +A IFED+
Sbjct: 336 GRLKDARNIFEDL 348
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ +D ++ TLI G L++ + + V+ N + YN ++ M + K
Sbjct: 38 FHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAF 97
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AM 222
+Y EM G+SPN TY++L+ + +D + ++ ++ + ++ +N L+
Sbjct: 98 DLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGF 157
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
C D E +F M + PD T++S++ +V+ A+++FN M + G P
Sbjct: 158 CKD-RKMKEGKTVFA-MMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNP 215
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ LI + K ++ D + N + I P+
Sbjct: 216 DIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPN 251
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
Query: 137 IGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGED 196
+G PN IT N L+ + + Q + ++ G + +Y +L+ +G + GE
Sbjct: 1 MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLI--HGLCKVGET 58
Query: 197 --TLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFS 253
L + + + K +QL+ +YNT++ MC D + ++AF+++ +M S+ P+ T+S
Sbjct: 59 RAALDLLQRVDGKLVQLNAVMYNTVIYGMCKD-KHVNDAFDLYSEM-VSKGISPNVVTYS 116
Query: 254 SMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPEL 313
++I+ GK+ +A +FN+++ +P+ + L+ + K ++ + + +
Sbjct: 117 ALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQ 176
Query: 314 GITPD 318
GI PD
Sbjct: 177 GIIPD 181
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
++Y EM + G+ PN++TY+ L+ + ++ ++ + P+ T+ L+
Sbjct: 97 FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDG 156
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ + R ++ +V+ M ++G+ V YN+L+ V + A IF M + P
Sbjct: 157 FCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTM-AQGGVNP 215
Query: 248 DSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRA 306
D +++ +I C + KV +A +FNEM PN+ SLI K+ R ++
Sbjct: 216 DIRSYNILINGFCKIK-KVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQL 274
Query: 307 LNRLPELGITPD 318
++++ + G+ P+
Sbjct: 275 VDQMHDRGVPPN 286
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 19/309 (6%)
Query: 42 QKRSVSLQETQSSNPTKHSQNPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTR-AR 100
Q R V LQ P H+ N + HG W +A++++E + + +
Sbjct: 272 QARVVLLQLKSHITPNAHTFNI-FIHG----------WC-----KANRVEEALWTIQEMK 315
Query: 101 NEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+R +++T+I+ Y F + EM+A G PN ITY ++ ++ K
Sbjct: 316 GHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFE 375
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYR-EMKEKGMQLSVTLYNTL 219
+ + M +G P+ Y L+ RA E+ V+R EM E G+ ++ + YN++
Sbjct: 376 EALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSM 435
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEML-EA 278
+AM D+A E+ ++M+SS C PD T+ ++ C RG V E + EM+ +
Sbjct: 436 IAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKH 495
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
+ T LIQ +A + + ITP R C LL + + E
Sbjct: 496 HLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESA 555
Query: 339 KLVECVEKS 347
+ +E + K+
Sbjct: 556 ERIEHIMKT 564
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 38/243 (15%)
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G K + Y+ +D +G+AK+ ++K + M + L NT A ++R + A E+
Sbjct: 180 GHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLV-TLNTVAKIMRRFAGAGEWEEA 238
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
+ ++ + E G++ + N LL ++A + +KS + P++ TF+ I
Sbjct: 239 VGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS--HITPNAHTFNIFIH 296
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK--------------------- 296
+V EA EM GF P + T++I+CY +
Sbjct: 297 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 356
Query: 297 -------------AQRT-DDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVE 342
AQ+ ++ +R R+ G PD F CL++ + + + E + V
Sbjct: 357 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 416
Query: 343 CVE 345
VE
Sbjct: 417 RVE 419
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 4/243 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+P+ F+ LI ++ GN D +Y+EM V PN +TYN++++ + R +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
K + M G PN TY +L+ + + R ++ + +++ M +G + YNTL+
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
VG A +IF M S PD T ++ G++ A F++M E+
Sbjct: 359 HGYCQVGKLRVALDIFCWM-VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDR-FCGCLLNVMTQTPKEELGK 339
+ +I KA + + RLP G+ PD R + +L + P+ E +
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Query: 340 LVE 342
L+
Sbjct: 478 LIR 480
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +F+ LI + L+V +M +G +P+++T+ +LL R ++
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGE--DTLSVYREMKEKGMQLSVTLYNTLL-AMC 223
M +G PN Y +L+ G + GE L + EM++KG+ V YNTLL +C
Sbjct: 165 ILMVKSGYEPNVVVYNTLID--GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++D A + + MK S N PD TF+++I + +G + EA+ ++ EM+++ +PN
Sbjct: 223 YSGRWSDAARMLRDMMKRSIN--PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+I R D + + + G P+
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 107 DPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+PN ++TLI G + L + EM+ G+ +++TYN LL + + R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ ++M ++P+ T+ +L+ + + ++ +Y+EM + + + YN+++
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPN 283
G +A + F D+ +S+ C P+ T++++I+ C R V E +F M GF +
Sbjct: 293 MHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFR-MVDEGMKLFQRMSCEGFNAD 350
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+F +LI Y + + + + +TPD
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ L+ ++ + ++M+ G+ ++ ++ L+ R R ++ +M
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ T+ SLL + D S+ M + G + +V +YNTL+ G +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
A E+ +M+ + D T+++++T G+ S+A M +M++ P++ T+L
Sbjct: 194 IALELLNEME-KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
I + K D+ + + + P++
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
F+ ++ EM P+++ + LL +R V ++M G+S + ++
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
L+ + R LSV +M + G + S+ + +LL V +AF + M S
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS- 170
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
+P+ ++++I G+++ A + NEM + G ++ +L+ + R D
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 304 VRALNRLPELGITPD 318
R L + + I PD
Sbjct: 231 ARMLRDMMKRSINPD 245
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 36/246 (14%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTM------GRAKRPW---- 160
F+TLI Y GN + L ++ + ++P+++TYN L+D M G+A W
Sbjct: 407 FTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMH 466
Query: 161 ----------------------QVKTIYK---EMTDNGLSPNWNTYASLLRAYGRARYGE 195
QV + EM + G+ PN TY S+++ Y R+
Sbjct: 467 SREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVS 526
Query: 196 DTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSM 255
+M+ + + YNTL+ G EAF + + M++ EN QPD+ T++ +
Sbjct: 527 KGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMEN-ENVQPDAVTYNMI 585
Query: 256 ITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
I+ S G + EA+ ++ +M G EP+ + S+I + A + + + + + G+
Sbjct: 586 ISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGL 645
Query: 316 TPDDRF 321
PDD+F
Sbjct: 646 APDDKF 651
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 3/213 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I + AG L V +EM A G P+++TYN LL+ + + +R + +
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
EM + G+ P+ T+ +L+ Y R E L + + ++ ++ + YNTL+ MC
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQ 452
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G +A E+++DM S E P+ T+S +I +G+V A A +EM+ G PN+
Sbjct: 453 -GDLGKANELWDDMHSRE-IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIM 510
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
S+I+ Y ++ + L ++ + PD
Sbjct: 511 TYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 101/199 (50%), Gaps = 3/199 (1%)
Query: 121 AGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNT 180
AG+ + + + + M + G+KP ++TYN++L + R R + + +++ M G++P+ +
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266
Query: 181 YASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMK 240
+ L+ + RA E+ L Y+EM+ + + V ++ L+ + G D A E +M+
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326
Query: 241 SSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQR 299
PD + +M+ CR G + EA + +EM+ G P++ +L+ K +R
Sbjct: 327 EF-GLMPDGVIY-TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384
Query: 300 TDDVVRALNRLPELGITPD 318
D LN + E G+ PD
Sbjct: 385 LSDAEELLNEMKERGVPPD 403
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 14/298 (4%)
Query: 130 VYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYG 189
V EM+ V P+++T+N ++D RA + M G+ P TY S+L+
Sbjct: 181 VISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLL 240
Query: 190 RARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDS 249
R + V+R M G+ V +N L+ G +EA +++M+ PD
Sbjct: 241 RNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMR-GRRVTPDV 299
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+FS +I + + RG++ A EM E G P+ + T +I + +A + +R +
Sbjct: 300 VSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDE 359
Query: 310 LPELGITPDDRFCGCLLNVMTQTPK----EELGKLVECVEKSNSKLGYVVKLLLEEQDIE 365
+ G PD LLN + + + EEL L E E+ L+ +
Sbjct: 360 MVAFGCLPDVVTYNTLLNGLCKERRLSDAEEL--LNEMKERGVPPDLCTFTTLIHGYCRD 417
Query: 366 GDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLENACKLLELGLTLEVYTDIQSR 423
G+ +K A + F++IS + D+ L++ C+ +LG E++ D+ SR
Sbjct: 418 GNIEK-ALQFFDTISDQRLRP------DIVTYNTLIDGMCRQGDLGKANELWDDMHSR 468
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+++++K G +D V+ M A GV P++ ++N L+ RA + YKEM
Sbjct: 232 YNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMR 291
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
++P+ +++ L+ + R + REM+E G+ +Y ++ G
Sbjct: 292 GRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLML 351
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA + ++M + C PD T+++++ +C R ++S+AE + NEM E G P+L T+
Sbjct: 352 EALRVRDEMVAF-GCLPDVVTYNTLLNGLCKER-RLSDAEELLNEMKERGVPPDLCTFTT 409
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
LI Y + + ++ + + + + PD L++ M + + +LGK E + +S
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCR--QGDLGKANELWDDMHS 467
Query: 350 K 350
+
Sbjct: 468 R 468
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 4/235 (1%)
Query: 86 RASKLKEK-SYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RA +L+E + R + D +FS LI L+ G D EM+ G+ P+ +
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
Y ++ RA + + EM G P+ TY +LL + R D + EM
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395
Query: 205 KEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
KE+G+ + + TL+ C D G ++A + F D S + +PD T++++I +G
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRD-GNIEKALQFF-DTISDQRLRPDIVTYNTLIDGMCRQG 453
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +A ++++M PN + LI + + + D+ L+ + GI P+
Sbjct: 454 DLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPN 508
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +F+ LI + AG + L Y+EM+ V P++++++ L+ R
Sbjct: 263 DVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYL 322
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
+EM + GL P+ Y ++ + RA + L V EM G V YNTLL +C +
Sbjct: 323 REMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKE 382
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+D A E+ +MK PD TF+++I G + +A F+ + + P++
Sbjct: 383 RRLSD-AEELLNEMK-ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIV 440
Query: 286 VLTSLI 291
+LI
Sbjct: 441 TYNTLI 446
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K + + + R++K D ++TLI Y G N+ + M+ V+P+ +TYN ++
Sbjct: 527 KGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMII 586
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ +YK+M G+ P+ TY S++ + A + + ++ EM +KG+
Sbjct: 587 SGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGL 645
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 105 RIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R PN F+ L+ G + ++E+M+ G +P++ YN L+++ RA P+
Sbjct: 26 RCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGA 85
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
I+ M G P+ +Y ++ AYGRA ED +V+ EMK G+ ++ + LL+
Sbjct: 86 AEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSA 145
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ G + +I M S +PD++ +SM+ + G+ + E +F+ M +
Sbjct: 146 YSSAGNVAKCEDIIGQMHKS-GLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRA 204
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ LI YG+A + + LP + PD
Sbjct: 205 DISTYNILINVYGRAGFVERMEELFQLLPAKNLEPD 240
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Query: 129 NVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAY 188
N+++EM+ KPN+ T+ L++ + R + + I+++M + G P+ Y +L+ +Y
Sbjct: 17 NIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESY 76
Query: 189 GRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPD 248
RA + ++ M+ G + YN ++ G ++A +FE+MK P
Sbjct: 77 SRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRI-GITPT 135
Query: 249 SWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGK 296
+ +++ S G V++ E + +M ++G +P+ FV+ S++ YG+
Sbjct: 136 MKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGR 183
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ I+ EM PN T+ +L+ A R E ++ +M+E G + V YN L+
Sbjct: 16 QNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMES 75
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ G+ A EIF M+ C+PD +++ M+ G +A+A+F EM G P
Sbjct: 76 YSRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITP 134
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNV 328
+ L+ Y A + ++ + G+ PD +LN+
Sbjct: 135 TMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNL 180
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 114 LIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNG 173
L+ Y +AGN C ++ +M G+KP+ N++L+ GR + +++ ++ M
Sbjct: 142 LLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGP 201
Query: 174 LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAF 233
+ +TY L+ YGRA + E +++ + K ++ V + + + +
Sbjct: 202 CRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCL 261
Query: 234 EIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
E+FE M + C PD T +++ CS ++ + + M
Sbjct: 262 ELFEKMIDA-GCYPDGGTAKVLLSACSSEEQIEQVTNVVRTM 302
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 93 KSYDTRARNEKWRIDPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K D + K + P+ F ++++ LYG G F +++ M+ + ++ TYN L+
Sbjct: 154 KCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILI 213
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ GRA +++ +++ + L P+ T+ S + AY R + + L ++ +M + G
Sbjct: 214 NVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCY 273
Query: 211 LSVTLYNTLLAMCA 224
LL+ C+
Sbjct: 274 PDGGTAKVLLSACS 287
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
I+ F+T+I Y D L + M+ +G++ ++ TYN L + RA R + K +
Sbjct: 240 INQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 299
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M + G+ PN +Y +L+ + + ++REM G + S+ YN ++
Sbjct: 300 LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 359
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G EA E F++ + PD +++++++ GKV A +F EM + G +PNL
Sbjct: 360 KGSIREA-ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLV 418
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEEL 337
T+LI K R+++ + + + G+TPDD L+ + K+ +
Sbjct: 419 AYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQNV 470
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
+S++I Y AGN V++E G++PN TY L++ + + + + +M
Sbjct: 175 YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQ 234
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ N + +++ Y R + L + M++ G++L V YNTL D
Sbjct: 235 VRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 294
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + M + +P+ +++++I+I G + EA +F EM G EP+L +
Sbjct: 295 EAKNLLRIM-IEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVM 353
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ Y K + R N + + G+ PD
Sbjct: 354 MDGYIKKGSIREAERFKNEMEKKGLVPD 381
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+ P + S ++ Y +G + +EM GVK N + YN+LLD R K +V +
Sbjct: 65 VTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEM 124
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
K M + G+ P TY L+ AR +V+ EMK K + V Y++++
Sbjct: 125 LKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCR 184
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A E+F++ + +P+ T+ ++I G++ AE + +M G N
Sbjct: 185 AGNVRRASEVFDECVGN-GIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQI 243
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V ++I Y + D + + ++GI D
Sbjct: 244 VFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 276
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+++ +++L+ Y + D + + M+ G++P + TY L+D + A+ +V+
Sbjct: 99 KVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEA 158
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+++EM LS + Y+S++ AY RA V+ E G++ + Y L+
Sbjct: 159 VFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFC 218
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+G + A + DM+ + F++MI + V +A + M + G E ++
Sbjct: 219 KIGQMEAAEMLVTDMQ-VRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDV 277
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +L +A R D+ L + E G+ P+
Sbjct: 278 YTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 311
>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 426
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R K +D + +I +YG G ++ M+ IG++PN+++YN LL G A+
Sbjct: 141 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELF 200
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++ M + N TY S++ YG+ E ++ +EM+ +G++ + Y+T+
Sbjct: 201 GEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTI 260
Query: 220 LAMCADVGYTDEAFEIFEDMKSS------------------------------ENCQPDS 249
+++ VG D A +F+ +++S E +PD+
Sbjct: 261 ISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
+ I I + G++ EA +F + ++AG ++ V LI + K ++ +VV ++
Sbjct: 321 IPRDTAIHILAAAGRLEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDK 380
Query: 310 LPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
+ E PD +LN GKL E EK+NS
Sbjct: 381 MRERRYFPDSNVIALVLNA--------YGKLHE-FEKANS 411
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++TL+ ++ F L+V+ EM+ I ++ T N ++D G+ + ++
Sbjct: 113 DTVSYTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 172
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 173 WGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 232
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G E + +
Sbjct: 233 LEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVL 291
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
++I Y +A R L+ L P D
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y S++ + +A+ + S+ EM+ G+ Y TLL M +
Sbjct: 68 SRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 KRFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN++++ +AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM G+ P+ +Y +LL + + + LSV+ EM+E L +T N ++ + +
Sbjct: 103 NEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G EA ++F M+ +P+ ++++++ + EA +F M E N+
Sbjct: 163 GMAKEADKLFWGMRKI-GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 221
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK 334
S++ YGK + + + GI P+ ++++ + K
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGK 269
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 91 KEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
K S +R + + D A++++I ++ A F ++ EM+ GV P+ ++Y LL
Sbjct: 62 KAISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLL 121
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
KR + +++ EM + + T ++ YG+ ++ ++ M++ G++
Sbjct: 122 TMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIE 181
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
+V YNTLL + D EA +F M+ +N + + T++SM+ I + +A
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKANN 240
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ EM G EPN +++I + K + D +L G+ D
Sbjct: 241 LIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEID 288
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD ++SMI + EA ++ NEM AG P+ T+L
Sbjct: 62 KAISIFSRLKRS-GFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ + + +R + + + E+ D C +++V Q
Sbjct: 121 LTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 107/235 (45%), Gaps = 2/235 (0%)
Query: 86 RASKLKE-KSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
R K E KS+ RN D ++T+I GN L + EMK +KPN+I
Sbjct: 586 RLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLI 645
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY L+ + A + K + EM G +P TY +L+A +R L V+ M
Sbjct: 646 TYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELM 705
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
G+ +T+YNTL+ + G T +A + ++M PD+ TF+++I
Sbjct: 706 MGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEML-GRGIAPDTITFNALILGHCKSSH 764
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ A A + +ML G PN+ +L+ A R + + + ++G+ P++
Sbjct: 765 LDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNN 819
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+ LI + + + D Y +M G+ PN+ T+N LL + A R + T+
Sbjct: 748 DTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVI 807
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM GL PN TY L+ Y + + L +Y EM KG + YN+L++ A
Sbjct: 808 CEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKA 867
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G ++A E+F +MK S T+ ++ S +E + +M E GF+P+
Sbjct: 868 GMMNQAKELFSEMKRRGVLHTSS-TYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGT 926
Query: 287 LTSLIQCYGKAQRTDDVVRALNRL 310
++S+ + + K T + R L L
Sbjct: 927 ISSMSRAFSKPGMTWEARRLLKTL 950
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Query: 98 RARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R + +D ++TL+ + +G+ D V E MKA GV+P+++T+ L+ + K
Sbjct: 214 RMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMK 273
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
R + T+Y+ M +G+ P+ T ++L+ R + +++REM + G+ + Y
Sbjct: 274 RIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYC 333
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
T + A V +E+ + +M S D +++++ GK+ EA+ + L
Sbjct: 334 TFIDSLAKVQRVNESLGLLGEM-VSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALS 392
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
PN T L+ + +A D + L ++ E ++P+ +LN + +
Sbjct: 393 DNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVK 446
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
E+ + PN FS+++ G +MK G+ PN++TY L+D + +
Sbjct: 426 EEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQ 485
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+Y++M G+ N SL+ + E+ +++++M E+G+ L Y TL
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCR-GKVSEAEAMFNEMLEA 278
+ G A ++ +++ N PD+ ++ I C CR GK SEA++ EM
Sbjct: 546 MDGLFKTGNMPAALKVGQELM-ERNLSPDAVVYNVFIN-CLCRLGKFSEAKSFLKEMRNT 603
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G EP+ ++I + T ++ LN + I P+
Sbjct: 604 GLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 116/272 (42%), Gaps = 36/272 (13%)
Query: 92 EKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+ +++ R + ++P+ + TLI Y + +YE M GV P+++T + L
Sbjct: 241 DAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSAL 300
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+D + R R + +++EM G++PN TY + + + + + ++L + EM +G+
Sbjct: 301 VDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGV 360
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS---SENC--------------------- 245
+ + +Y T++ G +EA ++ S + NC
Sbjct: 361 AMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQ 420
Query: 246 ----------QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYG 295
P+ TFSS++ RG +++A +M ++G PN+ +LI +
Sbjct: 421 MLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFF 480
Query: 296 KAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
K Q + + + G+ ++ L+N
Sbjct: 481 KCQGQEAALDVYRDMLHEGVEANNFIVDSLVN 512
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
++ +N L+D + + + + MT GLS + Y +L+ + + + V
Sbjct: 188 GVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVA 247
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
MK G++ SV + TL+ + +EAF ++E M S PD T S+++
Sbjct: 248 ERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRS-GVLPDVVTLSALVDGLCR 306
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
G+ SEA A+F EM + G PN + I K QR ++ + L + G+ D
Sbjct: 307 DGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMD--- 363
Query: 322 CGCLLNVMTQTPKEELGK 339
VM T + LGK
Sbjct: 364 -----LVMYTTVMDRLGK 376
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 102/247 (41%), Gaps = 34/247 (13%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++TL+ GN L V +E+ + P+ + YN ++ + R + + K+
Sbjct: 537 LDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSF 596
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
KEM + GL P+ TY +++ A R L + EMK ++ ++ Y TL+ +
Sbjct: 597 LKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLE 656
Query: 226 VGYTDEAFEIFEDMKSS-------------ENC---------------------QPDSWT 251
G ++A + +M S+ + C D
Sbjct: 657 AGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITV 716
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
+++++ + C G +A + +EML G P+ +LI + K+ D+ ++
Sbjct: 717 YNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQML 776
Query: 312 ELGITPD 318
G++P+
Sbjct: 777 HQGLSPN 783
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L V+E M G+ ++ YN L+ + + + EM G++P+ T+ +L+
Sbjct: 699 LEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILG 758
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ ++ + ++ + Y +M +G+ ++ +NTLL G EA + +MK +P
Sbjct: 759 HCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKM-GLEP 817
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
++ T+ ++T + + EA ++ EM+ GF P SLI + KA +
Sbjct: 818 NNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELF 877
Query: 308 NRLPELGITPDDRFCGCLLN 327
+ + G+ LLN
Sbjct: 878 SEMKRRGVLHTSSTYDILLN 897
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 102 EKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
+K + PN + T I + L + EM + GV +++ Y ++D +G+ +
Sbjct: 321 DKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKI 380
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ K + + + ++PN TY L+ A+ RA + + +M+EK + +V ++++
Sbjct: 381 EEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSI 440
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEA 278
L G +A MK S P+ T+ ++I C+G+ A ++ +ML
Sbjct: 441 LNGLVKRGCIAKAAGYMRKMKDS-GIAPNVVTYGTLIDGFFKCQGQ-EAALDVYRDMLHE 498
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G E N F++ SL+ K ++ + E G+ D
Sbjct: 499 GVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLD 538
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
GN + ++++M G+ + + Y L+D + + + +E+ + LSP+ Y
Sbjct: 518 GNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVY 577
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+ R + S +EM+ G++ YNT+++ G T +A ++ +MK
Sbjct: 578 NVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKW 637
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ-CYG 295
S + +P+ T+++++ G V +A+ + NEM AGF P ++Q C G
Sbjct: 638 S-SIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSG 691
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 118/258 (45%), Gaps = 30/258 (11%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R K +D + +I +YG G ++ M+ +G++PN+++YN LL G A+
Sbjct: 141 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELF 200
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++ M + N TY S++ YG+ E ++ +EM+ +G++ + Y+T+
Sbjct: 201 GEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTI 260
Query: 220 LAMCADVGYTDEAFEIFEDMKSS------------------------------ENCQPDS 249
+++ VG D A +F+ ++SS E +PD+
Sbjct: 261 ISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 250 WTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
I I + G++ EA +F + ++AG ++ V +I + K ++ +VV ++
Sbjct: 321 IPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIXVFERMIHLFSKYKKYGNVVEVFDK 380
Query: 310 LPELGITPDDRFCGCLLN 327
+ LG PD +LN
Sbjct: 381 MRGLGYFPDSNVIALILN 398
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN +++ G+AK + +++
Sbjct: 43 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 102
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G++PN +Y++LL Y R + LSV+ EM+E
Sbjct: 103 SEMRTAGVTPNTASYSTLLTMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 162
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 163 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 221
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 222 YNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 281
Query: 312 ELGITPD 318
G+ D
Sbjct: 282 SSGVDID 288
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 106 IDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++STL+ +Y F L+V+ EM+ I ++ T N ++D G+ +
Sbjct: 110 VTPNTASYSTLLTMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
++A + ++M+ + +P+S T+S++I+I GK+ A +F ++ +G + +
Sbjct: 230 GKTLEHEKANNLIQEMQ-NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDID 288
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 289 QVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRD 324
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 67
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y +++ +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 68 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVEN 127
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +M+ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 128 RKFLEALSVFAEMREIK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 187 YNTLLRVYGDAE 198
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 109/249 (43%), Gaps = 32/249 (12%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 177 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 236
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM + G+ PN TY++++ +G+ + ++++++ G+ + LY T++
Sbjct: 237 KANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPD---------------SWTFSS----------- 254
G A + ++K +N D +W F
Sbjct: 297 VAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIX 356
Query: 255 ----MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
MI + S K +F++M G+ P+ V+ ++ YGK D +
Sbjct: 357 VFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEM 416
Query: 311 PELGITPDD 319
E+G D
Sbjct: 417 QEVGCVFSD 425
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A IF +K S PD +++MI + EA ++ +EM AG PN ++L
Sbjct: 62 KAISIFSRLKRS-GFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
+ Y + ++ + + + E+ D C +++V Q
Sbjct: 121 LTMYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQ 161
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 9/233 (3%)
Query: 102 EKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
EK PN +STLI Y G D +V++ M + G PN+ TY +L++ + +R
Sbjct: 194 EKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERI 253
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ + E GL P+ T+ +++ RA ++R + G ++ Y L
Sbjct: 254 EEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVL 313
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEA 278
L G +EAF +F++M+ S +P+ ++ +I ++C C GK+ + + +F+ +++
Sbjct: 314 LDGLCKHGNLEEAFALFQEMQRS-TVKPNLVIYTILIDSLCKC-GKIKDGKELFSRLIDE 371
Query: 279 GFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
G +PN++ T+L+ K + + ++ E G TPD C NV+ Q
Sbjct: 372 GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDK----CAYNVIIQ 420
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ S LI + D L+V ++ +G++P+++T+ LL+ + + QV +Y
Sbjct: 96 DIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLY 155
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M GL PN TY ++ + ++ + L ++M++ G +V Y+TL+
Sbjct: 156 DDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLR 215
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA +F D+ S+ C P+ +T++S++ ++ EA + +E L G P++
Sbjct: 216 GQMDEARSVF-DLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVT 274
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECVE 345
T++I +A R + + G TP+ G LL+ + + EE L + ++
Sbjct: 275 FTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQ 334
Query: 346 KSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSI 379
+S K V+ +L + + K+ ELF+ +
Sbjct: 335 RSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRL 368
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 109/208 (52%), Gaps = 5/208 (2%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
FS+++++ G+++ + + +E++ +G++ ++ + + L++ R ++ ++
Sbjct: 69 FSSIVRM----GHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL 124
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
GL P+ T+ +LL + + +Y +M +G+Q +V YN ++ + G +
Sbjct: 125 KLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKAN 184
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
EA + M+ C P+ +S++I RG++ EA ++F+ M+ G PN++ TSL
Sbjct: 185 EALGFLKQMEKV-GCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSL 243
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPD 318
+ Y K +R ++ V+ L+ G+ PD
Sbjct: 244 MNGYCKIERIEEAVQLLDETLRKGLVPD 271
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN ++ +I +G + L ++M+ +G PN++ Y+ L+D + + +
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ M G +PN TY SL+ Y + E+ + + E KG+ + + T+++
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G A ++F + + P+ T+ ++ G + EA A+F EM + +PN
Sbjct: 283 CRAGRPLAAQQLFRYI-CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
L + T LI K + D +RL + G+ P+
Sbjct: 342 LVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPN 376
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F+T+I AG ++ + A G PN++TY LLD + + + ++
Sbjct: 271 DIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALF 330
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + + PN Y L+ + + +D ++ + ++G++ +V Y L+
Sbjct: 331 QEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKE 390
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA ++F M+ + C PD ++ +I S A + EM+ GF +
Sbjct: 391 GLIIEAHKLFRKME-EDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446
>gi|147778635|emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
Length = 466
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D ++ +++ G + V EM A+G+ N TY L+D GRA R V
Sbjct: 109 KLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYGRAGRLNDVWA 168
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ EM+ +G P+ Y+ ++ Y + + + RE++E G+ L +YN+++
Sbjct: 169 VIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFG 228
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G EA E+FE M+ E +PD T++S+I G V +A +F++M E G P+
Sbjct: 229 KCGELSEALEVFEKMQ-EEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDP 287
Query: 285 FVLTSLIQCYGKAQRTDDVVR 305
+ ++I G+ + D + R
Sbjct: 288 KIFITIISRLGEQGKWDVIKR 308
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+++T+I+ G+ G ++ EM +G+K ++ YN +L + R + E
Sbjct: 78 GSYTTVIEALGSVGRTLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAE 137
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G+ N TY +L+ YGRA D +V EM G +Y+ ++ + D G
Sbjct: 138 MDALGIGRNRATYEALVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGM 197
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+A EI +++ D ++S+I G++SEA +F +M E G +P++
Sbjct: 198 WKKAMEIVREIREM-GVSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWN 256
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRF 321
SLIQ + KA + +++ E G+ PD +
Sbjct: 257 SLIQWHCKAGDVGKALELFSKMQEEGLYPDPKI 289
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 106 IDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
+D ++++I +G G L V+E+M+ GVKP+++T+N+L+ +A + +
Sbjct: 215 LDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALEL 274
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M + GL P+ + +++ G + + MK +G Q S +Y L+ +
Sbjct: 275 FSKMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQ 334
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G E +K SE QP + F + + +G + + M G EPNL
Sbjct: 335 YGRFQGPEECISALK-SEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLI 393
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRL----PEL-------GITPDDR 320
+L LI +G A R + + + + PE+ G TPD +
Sbjct: 394 MLNMLINAFGIAGRHLEALSVYHHIKDTVPEIYEEMESAGCTPDRK 439
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 103/221 (46%), Gaps = 1/221 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S +I +Y G + + + E++ +GV + YN+++DT G+ + ++
Sbjct: 181 DSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGELSEALEVF 240
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
++M + G+ P+ T+ SL++ + +A L ++ +M+E+G+ ++ T+++ +
Sbjct: 241 EKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRLGEQ 300
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D FE+MK + Q ++ ++ I G+ E + + G +P+ +
Sbjct: 301 GKWDVIKRNFENMKCRGH-QRSGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASM 359
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
L Y + + V+ L + GI P+ L+N
Sbjct: 360 FCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLIN 400
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 144 ITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYRE 203
+ YN + R + + +M G S + +Y +++ A G + +++RE
Sbjct: 43 VVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEAIFRE 102
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
M G++L + +YN +L C G + A ++ +M + + T+ +++ G
Sbjct: 103 MVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDAL-GIGRNRATYEALVDYYGRAG 161
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLTSLIQCY---GKAQRTDDVVRALNRLPELGITPDDR 320
++++ A+ EM GF P+ FV + +I Y G ++ ++VR + E+G++ D R
Sbjct: 162 RLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIR---EMGVSLDKR 218
Query: 321 FCGCLLNVMTQTPKEELGKLVECVEK 346
+++ + EL + +E EK
Sbjct: 219 IYNSIIDTFGKCG--ELSEALEVFEK 242
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 36/150 (24%)
Query: 204 MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRG 263
+ E G +LS +YN + VG D+A ++ M++ +++++I G
Sbjct: 33 ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEAL-GFSLSLGSYTTVIEALGSVG 91
Query: 264 KVSEAEAMFNEMLEAGFEPNLFVLT----------------------------------- 288
+ EAEA+F EM+ G + +L V
Sbjct: 92 RTLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYE 151
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+L+ YG+A R +DV + + G PD
Sbjct: 152 ALVDYYGRAGRLNDVWAVIGEMSRDGFGPD 181
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ LI G +++ E+M G +PN ++YN LL + K+ + + M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G P+ TY ++L A + ED + + ++ KG + YNT++ A G T
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSL 290
+A ++ ++M+ +++ +PD+ T+SS++ S GKV EA F+E G PN S+
Sbjct: 467 KAIKLLDEMR-AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 291 IQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ K+++TD + L + G P++
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D ++ +I Y AG + L+V + M V P+++TYN +L ++ + + Q +
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
M P+ TY L+ A R + + EM+++G V YN L+
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G DEA + DM SS CQP+ T + ++ G+ +AE + +ML GF P++
Sbjct: 288 GRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI + + L ++P+ G P+
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++T+I AG + + +EM+A +KP+ ITY++L+ + R + + + E
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
G+ PN T+ S++ ++R + + M +G + + T Y L+ A G
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 231 EAFEIFEDM 239
EA E+ ++
Sbjct: 572 EALELLNEL 580
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 71/172 (41%), Gaps = 4/172 (2%)
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
NN L M R + + M +G P+ +L+R + R + ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G V YN +++ G + A + + M S PD T+++++ GK+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLK 221
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A + + ML+ P++ T LI+ + ++ L+ + + G TPD
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 52/110 (47%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R + + D +S+L+ G D + + E + +G++PN +T+N+++ + ++++
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ M + G PN +Y L+ ++ L + E+ KG+
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 1/189 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+++ ++M IG +P+++ YN ++D++ + +R +KE+ G+ PN TY +L+
Sbjct: 175 VSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNG 234
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ D + R+M ++ + +V Y+ LL G EA EIFE+M + P
Sbjct: 235 LCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM-VRMSIDP 293
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D T+SS+I ++ EA MF+ M+ G P++ +LI + KA+R +D ++
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 308 NRLPELGIT 316
++ + G+
Sbjct: 354 RKMSQRGLV 362
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K +I PN +S L+ + G ++EEM + + P+++TY++L++ + R
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ M G P+ +Y +L+ + +A+ ED + ++R+M ++G+ + YNTL+
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
VG D+A E F M S PD WT++ ++ G + +A +F +M ++
Sbjct: 373 QGFFQVGDVDKAQEFFSQM-DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEM 431
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ ++ T++IQ K + +D L G+ PD
Sbjct: 432 DLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPD 469
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 1/234 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D F+ +I + L+V +M +G +P+ +T +L++ R R +
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ +M + G P+ Y +++ + + R D L ++E+ KG++ +V Y L+
Sbjct: 177 LVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLC 236
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
+ G ++A + DM P+ T+S+++ GKV EA+ +F EM+ +P++
Sbjct: 237 NSGRWNDAARLLRDM-IKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG 338
+SLI R D+ + + + G PD L+N + + E G
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 349
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 105/216 (48%), Gaps = 3/216 (1%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+R D A++ +I + L+ ++E+ G++PN++TY L++ + + R
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ ++M ++PN TY++LL A+ + + ++ EM + + Y++L+
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEP 282
DEA ++F D+ S+ C PD +++++I C + +V + +F +M + G
Sbjct: 306 CLHDRIDEANQMF-DLMVSKGCFPDVVSYNTLINGFCKAK-RVEDGMKLFRKMSQRGLVN 363
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
N +LIQ + + D +++ G++PD
Sbjct: 364 NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD 399
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++TLI+ + G+ D + +M + GV P++ TYN LL + + I+++M
Sbjct: 368 YNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQ 427
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ + + TY ++++ + ED ++ + KG++ + Y T+++ G
Sbjct: 428 KSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQH 487
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
E ++ MK + DS +C G ++ + + +ML G+ P+L
Sbjct: 488 EVEALYTKMKQEGLMKNDSM-------LCLGDGDITISAELIKKMLSCGYAPSLL 535
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 110/226 (48%), Gaps = 14/226 (6%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIG---------VKPNMITYNNLLDTMGRAKRPWQ 161
++T++++YG AG F +++++ M++ VKPN++TYN ++ G++ +
Sbjct: 357 YNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEK 416
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
+ +EM G+ P+ TY+++L + +A + ++ +++E G ++ LY T++
Sbjct: 417 AGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVV 476
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G +A + D+K E + + I I + G++ EA +F + G
Sbjct: 477 AYERAGLVSQAKRLLRDLKDPEGIPKE-----TAIKILASAGRLEEAAWLFRRAVNTGEI 531
Query: 282 PNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ V +++ Y K +R +V+ + + +LG PD +N
Sbjct: 532 KDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSEIIATAMN 577
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 97 TRARNEKWRIDPNAFSTLIKLYGTAGNF-DGCLNVYEEMKAIGVKPNMITYNNLLDTMGR 155
+R R R D A++ + Y + D + +M A GV P+ TY+ +L + R
Sbjct: 236 SRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALAR 295
Query: 156 AKRPWQVKTIYKEMTDNG-LSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVT 214
R +++ M + P+ + + +L AYG+ + ++ M+ G+ SV
Sbjct: 296 RGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVV 355
Query: 215 LYNTLLAMCADVGYTDEAFEIFEDMKSSEN--------CQPDSWTFSSMITICSCRGKVS 266
YNT+L + D G EA +F+ M+S+ + +P+ T+++MITI +
Sbjct: 356 TYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDE 415
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL 326
+A + EM G +P+ ++++ + KA + D R +L E G D
Sbjct: 416 KAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDP------- 468
Query: 327 NVMTQTPKEELGKLVECVEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISK 381
V+ QT +V E++ + +LL + +D EG K+ A ++ S +
Sbjct: 469 -VLYQT-------MVVAYERAG-LVSQAKRLLRDLKDPEGIPKETAIKILASAGR 514
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ P+AFS TL+ AG+ D L M+ V P++I ++NL+ R +
Sbjct: 173 VTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDAPKAL 232
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS-VYREMKEKGMQLSVTLYNTLLAM 222
++ + G+ P+ Y + + AY ++ D + +M G+ Y+ +LA
Sbjct: 233 ALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAA 292
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
A G A +F M++ +PD F+ ++ EA+ +F M AG P
Sbjct: 293 LARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAGVPP 352
Query: 283 NLFVLTSLIQCYGKA 297
++ ++++ YG A
Sbjct: 353 SVVTYNTMLRVYGDA 367
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 31/254 (12%)
Query: 78 IWVNPKSPR----------ASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGC 127
+W+NP P A++L+++ +D R ID A T + TA +
Sbjct: 47 VWLNPNLPSSHPLHQRHKSAAELQQRQHDDRT------IDVPALVTALSAARTAPDLAAV 100
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
L + + A LL + +R V + D Y LLR+
Sbjct: 101 LATHRPVSAR-------LLGALLSRLPDPRR--GVALLDLLAPDLPAPTLLIPYNLLLRS 151
Query: 188 YGRARYGEDTLS--VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
RA GE L+ + EM+E+G+ Y+TLLA G+ D A F + +
Sbjct: 152 ACRA--GELRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHAL-TFLPLMEDDAV 208
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
PD FS++I + G +A A+F+ + AG P+L + + Y K+ D R
Sbjct: 209 APDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKR 268
Query: 306 A-LNRLPELGITPD 318
L+ +P G+ PD
Sbjct: 269 MLLHDMPADGVAPD 282
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 107 DPNAF--STLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
DP T IK+ +AG + ++ G + + ++D + +R V
Sbjct: 496 DPEGIPKETAIKILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIE 555
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
++ EM G P+ A+ + AYG+ + + ++Y+ M+E G S ++ ++++
Sbjct: 556 VFDEMRKLGQLPDSEIIATAMNAYGKLKEFDKAAALYQAMREAGCVFSDRVHFQMISLL 614
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 3/225 (1%)
Query: 105 RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQV 162
R PN ++ LI Y A + ++++M GV PN++T N L+D M + R
Sbjct: 411 RCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGA 470
Query: 163 KTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAM 222
+ EM GL N TY +L+RA+ E + ++ EM E G +Y TL++
Sbjct: 471 VEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISG 530
Query: 223 CADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEP 282
+ G D A + MK + PD +F+ +I + K+ EA M EM AG +P
Sbjct: 531 LSQAGKLDRASFVLSKMKEA-GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKP 589
Query: 283 NLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLN 327
+ +LI + K R + ++ + G+ P G L++
Sbjct: 590 DGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIH 634
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Query: 104 WRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAI-GVKPNMITYNNLLDTMGRAKRPW 160
+ ++P+ ++TLI G + L + E M++ PN +TYN L+D +A
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIE 433
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ ++ +M +G+ PN T +L+ + + + EM+ KG++ + Y L+
Sbjct: 434 AARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALI 493
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
+V ++A E+F++M + C PD+ + ++I+ S GK+ A + ++M EAGF
Sbjct: 494 RAFCNVNNIEKAMELFDEMLEA-GCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGF 552
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
P++ LI + + + D+ L + GI PD
Sbjct: 553 SPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPD 590
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + TLI AG D V +MK G P+++++N L++ R + + +
Sbjct: 520 DAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML 579
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCAD 225
KEM + G+ P+ TY +L+ + + + ++M ++G+ +V Y L+ A C +
Sbjct: 580 KEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G DEA +IF DM S+ P++ ++ +I + +V A ++ ++M G +PN
Sbjct: 640 -GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTN 698
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++ + + ++R+ E PD
Sbjct: 699 TFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 8/257 (3%)
Query: 66 PHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGN 123
P+ TG S + K RA +E+ ++ + + PN+ + LI +G
Sbjct: 227 PNSNTGHIVFSALSKRDKVGRAVD-EEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGR 285
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
D +V + +G + N LL +GRA+ ++ T+ EM + + PN T+
Sbjct: 286 TDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGI 345
Query: 184 LLRAYGRARYGEDTLSVYREM---KEKG--MQLSVTLYNTLLAMCADVGYTDEAFEIFED 238
L+ + R ++ L V+ +M + G ++ V YNTL+ VG +E + E
Sbjct: 346 LINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVER 405
Query: 239 MKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQ 298
M+S C P++ T++ +I + A +F++M + G PN+ L +L+ K
Sbjct: 406 MRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHG 465
Query: 299 RTDDVVRALNRLPELGI 315
R + V N + G+
Sbjct: 466 RINGAVEFFNEMQGKGL 482
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++K + + + N L+R +GRA+ +++ VY E+ + + N L+ +
Sbjct: 146 LFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPS--RRLTHIRNILIDVLF 203
Query: 225 DVGYTDEAFEIFEDM-KSSENCQPDSWTFSSMITICSCRGKVSEAE------AMFNEMLE 277
G D+A + ++M + P+S T + + S R KV A + ++ E
Sbjct: 204 RKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAE 263
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVM 329
PN LT LI ++ RTD L+ L +LG + C LL +
Sbjct: 264 HEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 124/251 (49%), Gaps = 9/251 (3%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+++ +I + AG + L + M+ G PN++T+N L++ + K K +
Sbjct: 427 SYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMV 486
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
++GL P+ T+ SL+ +D + + EM E G++ +V YN L+ G+
Sbjct: 487 MEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHV 546
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSS-MITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+A E+ MK + PD+++F++ +++ C R K+ +A+ +FN+M G P+ +
Sbjct: 547 SKAIELLNKMK-MDGITPDAYSFNAPILSFCRMR-KIEKAQKLFNDMSRYGVSPDSYTYN 604
Query: 289 SLIQCYGKAQRTD---DVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGKLVECV 344
+LI+ +R D +++ A+ + +G + ++ +T+ + E G + +
Sbjct: 605 ALIKALCDERRVDEAKEIILAMESISCIGTKQHTYW--PVVGALTKMGRFSEAGMFMNKL 662
Query: 345 EKSNSKLGYVV 355
+ N+ LG V+
Sbjct: 663 HRKNAHLGSVL 673
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 183 SLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSS 242
+L+ ++GR V+ ++ G++ S +YN ++A G D A+ F+ M +
Sbjct: 150 ALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQM-PA 208
Query: 243 ENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDD 302
+ C+PD +T+++++ RG V EA + +M AG PN+ T L+ + A R ++
Sbjct: 209 DGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEE 268
Query: 303 VVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELG--KLVECVEKSNSKLGYVVKLLLE 360
V L R+ E G++ + L++ + ++E L E +E S+ L + L
Sbjct: 269 AVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIE-SDPTLHSIAYHTLL 327
Query: 361 EQDIEGDFKKEATELFNSISK 381
+ D KEA EL +SK
Sbjct: 328 YCLSKNDMDKEAVELAKKMSK 348
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 100/222 (45%), Gaps = 1/222 (0%)
Query: 131 YEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGR 190
+ +M + G+ ++ +YN ++D +A + K M ++G SPN T+ +L+ Y +
Sbjct: 413 FSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLK 472
Query: 191 ARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSW 250
D + + + E G+ V + +L+ D+AF F +M S +P+
Sbjct: 473 LGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEM-SEWGVRPNVQ 531
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
T++ +I G VS+A + N+M G P+ + + I + + ++ + + N +
Sbjct: 532 TYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDM 591
Query: 311 PELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNSKLG 352
G++PD L+ + + + K + +S S +G
Sbjct: 592 SRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIG 633
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D F++LI D N + EM GV+PN+ TYN L+ + A + +
Sbjct: 494 DVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELL 553
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M +G++P+ ++ + + ++ R R E ++ +M G+ YN L+ D
Sbjct: 554 NKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDE 613
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEM 275
DEA EI M+S T+ ++ + G+ SEA N++
Sbjct: 614 RRVDEAKEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKL 662
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
Y ++ + R K + + +M +GL + +Y ++ + +A E L + M+
Sbjct: 393 YIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQ 452
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
E G ++ +NTL+ +G +A + F M PD TF+S+I ++
Sbjct: 453 ESGFSPNLVTFNTLINGYLKLGNVHDA-KAFLKMVMEHGLMPDVITFTSLIDGLCHTHQL 511
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+A F+EM E G PN+ LI A + LN++ GITPD
Sbjct: 512 DDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPD 564
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 36/249 (14%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D ++TL+ G D L + ++M+ G++PN++TY L+D A R +
Sbjct: 212 RPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVC 271
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+ + M + G+S TY SL+ R E + E E L Y+TLL +
Sbjct: 272 VLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLS 331
Query: 225 DVGYTDEAFEIFEDM-----------------------KSSENCQ--------PDSWTFS 253
EA E+ + M +SS+ C+ + F
Sbjct: 332 KNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFD 391
Query: 254 SMITICS----CRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNR 309
I I C+ +S+A F++M+ G ++ +I C+ KA + + +
Sbjct: 392 MYIMIIKSFLRCK-DISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKV 450
Query: 310 LPELGITPD 318
+ E G +P+
Sbjct: 451 MQESGFSPN 459
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
++ +I AG D +++M A G +P+ TYN L+ + R + + K+M
Sbjct: 183 YNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQME 242
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
G+ PN TY L+ + A E+ + V MKEKG+ + Y +L+
Sbjct: 243 RAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLV 292
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 92 EKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
+ +++ + +W + PN ++ LI +AG+ + + +MK G+ P+ ++N
Sbjct: 512 DDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAP 571
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
+ + R ++ + + ++ +M+ G+SP+ TY +L++A
Sbjct: 572 ILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKA 609
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
+I +++LI + GN ++ ++EM G+KP +++Y +L+ + +
Sbjct: 433 KITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFR 492
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
+Y EMT G++PN T+ +L+ A RA D ++ EM E+ M + YN ++
Sbjct: 493 LYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHC 552
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G T +AFE+ M + PD++T+ +I+ G+V EA+ +++ F+ N
Sbjct: 553 KEGNTVKAFELLNQM-VQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNE 611
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++L+ Y K R D + + + G+ D
Sbjct: 612 MCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
A S+L++ G ++ +K +G P++ YN L++++ + + + + ++KEM
Sbjct: 333 ALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM 392
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ GL N TY+ L+ ++ R + + +M G++++V YN+L+ +G
Sbjct: 393 GEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNL 452
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A F++M + +P +++S+I+ +GK+ EA +++EM G PN + T+
Sbjct: 453 SAAVSFFDEM-IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDD 319
LI +A R D R + + E + P++
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNE 541
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 110/253 (43%), Gaps = 5/253 (1%)
Query: 69 KTGSSPKSYIW---VNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFD 125
+ G P +Y + ++ + K + E ++++ +S L+ Y G
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLR 628
Query: 126 GCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLL 185
L V EM GV +++ Y L+D + + V + K M D L P+ Y S++
Sbjct: 629 DALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMI 688
Query: 186 RAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENC 245
Y +A + ++ M ++G ++ Y TL+ G D+A ++++M S N
Sbjct: 689 DGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVS-NS 747
Query: 246 QPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVR 305
P+ T+ + + G + +A + N+ML+ G N L++ + K R ++ +
Sbjct: 748 TPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATK 806
Query: 306 ALNRLPELGITPD 318
L+ + + I PD
Sbjct: 807 LLDEMIDNAIFPD 819
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 1/209 (0%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
++++LI Y G +Y EM G+ PN T+ L+ + RA R ++ EM
Sbjct: 473 SYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEM 532
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ + PN TY ++ + + + +M +KG+ Y L++ G
Sbjct: 533 LEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRV 592
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
EA + +D+ E+ + + +S+++ G++ +A + EM++ G + +L
Sbjct: 593 CEAKKFIDDL-HREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAV 651
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI K Q T V L + + + PD
Sbjct: 652 LIDGTIKEQDTSAVFGLLKNMHDQRLRPD 680
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Query: 71 GSSPKSYIWVNPKSP--RASKLKEKSYDTRARNEKWRIDPN--AFSTLIKLYGTAGNFDG 126
G +P +Y + S RA+++ + ++ + + PN ++ +I+ + GN
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTD-AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559
Query: 127 CLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLR 186
+ +M G+ P+ TY L+ ++ R + K ++ N Y++LL
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLH 619
Query: 187 AYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
Y + D L V REM ++G+ + + Y L+ T F + ++M + +
Sbjct: 620 GYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHD-QRLR 678
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
PD ++SMI S G V +A +++ M++ G PN+ T+LI KA D
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMD 733
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 3/211 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D + +I+ + NF + + M++ + N++ YN L+ + + KR W+
Sbjct: 225 RPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVE 282
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
I + GL+ + TY +L+ + + E V EM E G + ++L+
Sbjct: 283 IKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLR 342
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G +AF++ +K P + ++++I GK EAE +F EM E G N
Sbjct: 343 RKGKVVDAFDLVNRVKKV-GAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAND 401
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+ LI + + + D + L ++ GI
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKMIMAGI 432
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
D L ++ E+ ++G++P++ Y ++ + K + K + + M + L N Y L
Sbjct: 210 DMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVL 267
Query: 185 LRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL-LAMC------ADVGYTDEAFEIFE 237
+ + + + + + + +KG+ S Y TL L +C G DE E+
Sbjct: 268 IHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIEL-- 325
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
P SS++ +GKV +A + N + + G P+LFV +LI K
Sbjct: 326 ------GFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379
Query: 298 QRTDDVVRALNRLPELGITPDD 319
+ D+ + E G+ +D
Sbjct: 380 GKFDEAELLFKEMGEKGLCAND 401
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G+ + + ++ +M G+ N ++YN L+ + R + + EM DN + P+ TY
Sbjct: 765 GSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITY 823
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
++++ R + + + M KG++ YN L+ C G +AFE+ +DM
Sbjct: 824 STIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDM-I 882
Query: 242 SENCQPDSWTFSSM 255
+P+ T S+
Sbjct: 883 RRGVKPNQATHKSL 896
>gi|449525305|ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Cucumis sativus]
Length = 600
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 6/231 (2%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+ +I G +D L V+++M G++PN +++N L++ +G+AK ++Y
Sbjct: 326 DTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNV 385
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G SP+ T+ +LL A +A D + ++ +K + +QL++ +YNT+L C+ +G
Sbjct: 386 MKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQLNIHIYNTILMSCSKLGL 445
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ A +I +M+ S + +++ ++T C K A ++ M+ P+ F
Sbjct: 446 WERAVQILWEMEVS-GLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTFTHL 504
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGK 339
SLI+C D+V LN+ PD ++ M K +L K
Sbjct: 505 SLIRCCIWGSLWDEVELLLNK-----SAPDVSVYNVVIQGMCLRGKSDLAK 550
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN+ F+ LI G A +VY MK++G P++ T+N LL + +A R
Sbjct: 356 LQPNSVSFNALINALGKAKEVTLAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAI 415
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+++ + + N + Y ++L + + E + + EM+ G+ +S + YN ++ C
Sbjct: 416 HLFEFVKREKVQLNIHIYNTILMSCSKLGLWERAVQILWEMEVSGLSISTSSYNIVMTAC 475
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ A +++E M + PD++T S+I C E E + N+ P+
Sbjct: 476 EMARKPEIALQVYERM-VHQKLTPDTFTHLSLIRCCIWGSLWDEVELLLNKS-----APD 529
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
+ V +IQ ++D + ++ E GI PD + +L + + P
Sbjct: 530 VSVYNVVIQGMCLRGKSDLAKKLYTKMRENGIQPDGKTRALMLQNLPKDP 579
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 38/212 (17%)
Query: 109 NAFSTLIKLYGTAGNFDGCLNVYE--EMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
+ +S ++K A F L +++ E + + + + I YN ++ G+ + + +
Sbjct: 219 HTYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQFDAIVYNTMISICGKDNNWVEAERTW 278
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ M NG TY+ L+ + R E + Y +M + +
Sbjct: 279 RLMEKNGCGATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFK---------------- 322
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
P + T ++I S GK A +F +ML+ G +PN
Sbjct: 323 --------------------PGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVS 362
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI GKA+ N + +G +PD
Sbjct: 363 FNALINALGKAKEVTLAFSVYNVMKSMGHSPD 394
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 71 GSSPKSYIWVNPKSPRASKLKEKSYDTR------ARNEKWRIDPNAFSTLIKLYGTAGNF 124
G SP Y W + + K Y + EK +++ + ++T++ G +
Sbjct: 390 GHSPDVYTW---NALLGALYKANRYSDAIHLFEFVKREKVQLNIHIYNTILMSCSKLGLW 446
Query: 125 DGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASL 184
+ + + EM+ G+ + +YN ++ A++P +Y+ M L+P+ T+ SL
Sbjct: 447 ERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTFTHLSL 506
Query: 185 LRA--YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFEDMKS 241
+R +G + + E L + + + V++YN ++ MC G +D A +++ M+
Sbjct: 507 IRCCIWG-SLWDEVELLLNKSAPD------VSVYNVVIQGMCLR-GKSDLAKKLYTKMRE 558
Query: 242 SENCQPDSWTFSSMI 256
+ QPD T + M+
Sbjct: 559 N-GIQPDGKTRALML 572
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 41/281 (14%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R K +D + +I +YG G ++ M+ +G++PN+++YN LL G A+
Sbjct: 144 REMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELF 203
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
+ +++ M + N TY S++ YG+ E ++ +EM+ +G++ + Y+T+
Sbjct: 204 GEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTI 263
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT---------------------- 257
+++ VG D A +F+ ++SS + D F +MI
Sbjct: 264 ISIWGKVGKLDRAAMLFQKLRSS-GVEIDQILFQTMIVAYERAGLVAHAKRLLHELKSPD 322
Query: 258 ---------ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALN 308
I + G++ EA +F ++AG ++ V +I + K ++ +VV +
Sbjct: 323 NIPRDTAIHILAGAGRIEEATYVFRRAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFD 382
Query: 309 RLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSNS 349
++ LG PD +LN GKL E +K+NS
Sbjct: 383 KMRGLGYFPDSNVIALVLNA--------YGKLHE-FDKANS 414
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 108 PN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTI 165
PN ++STL+ +Y F L+V+ E++ + ++ T N ++D G+ + +
Sbjct: 115 PNTASYSTLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKL 174
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ M G+ PN +Y +LLR YG A + + ++R M+ K ++ +V YN+++ +
Sbjct: 175 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 234
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
++A + ++M+ +P+S T+S++I+I GK+ A +F ++ +G E +
Sbjct: 235 TLEHEKANNLIQEMQ-GRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 293
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ ++I Y +A R L+ L P D
Sbjct: 294 LFQTMIVAYERAGLVAHAKRLLHELKSPDNIPRD 327
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +STLI +G G FD L+ ++M+ V +++ Y+NL++ + + +I+
Sbjct: 11 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIF 70
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+ +G +P+ Y + + +G+A+ + S+ EM+ G+ + Y+TLL M +
Sbjct: 71 SRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVEN 130
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
EA +F +++ + C D T + MI + G EA+ +F M + G EPN+
Sbjct: 131 KKFLEALSVFSELREMK-CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 189
Query: 287 LTSLIQCYGKAQ 298
+L++ YG A+
Sbjct: 190 YNTLLRVYGDAE 201
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S LI+L ++ ++++ +K G P+++ YN ++ G+AK + +++
Sbjct: 46 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLI 105
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE-------------------- 206
EM G+ PN +Y++LL Y + + LSV+ E++E
Sbjct: 106 SEMRIAGVMPNTASYSTLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQL 165
Query: 207 ---------------KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWT 251
G++ +V YNTLL + D EA +F M+ +N + + T
Sbjct: 166 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVT 224
Query: 252 FSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLP 311
++SM+ I + +A + EM G EPN +++I +GK + D +L
Sbjct: 225 YNSMMMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 284
Query: 312 ELGITPD 318
G+ D
Sbjct: 285 SSGVEID 291
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 110/249 (44%), Gaps = 32/249 (12%)
Query: 103 KWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
K I+PN +++TL+++YG A F ++++ M+ ++ N++TYN+++ G+
Sbjct: 180 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 239
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ + +EM G+ PN TY++++ +G+ + ++++++ G+++ L+ T++
Sbjct: 240 KANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 299
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSW------------------------------ 250
G A + ++KS +N D+
Sbjct: 300 VAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRRAIDAGEVKDIT 359
Query: 251 TFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRL 310
F MI + S K + +F++M G+ P+ V+ ++ YGK D +
Sbjct: 360 VFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANSVYMEM 419
Query: 311 PELGITPDD 319
E+G D
Sbjct: 420 QEVGCVFSD 428
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 168 EMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVG 227
EM D LSP+ TY++L+ +G+ + LS ++M++ + + LY+ L+ + +
Sbjct: 2 EMRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 228 YTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVL 287
+A IF +K S PD +++ I + EA ++ +EM AG PN
Sbjct: 62 DYSKAISIFSRLKRS-GFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASY 120
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
++L+ Y + ++ + + + L E+ D C +++V Q
Sbjct: 121 STLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQ 164
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 132/256 (51%), Gaps = 7/256 (2%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI YG G D ++EEMK +G +P++ITYN L++ + ++ +
Sbjct: 286 DIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFL 345
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM ++GL PN TY++L+ A + + + +M+ G+ + Y +L+
Sbjct: 346 HEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKA 405
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
GY +A ++ ++M + + T+++++ G++ EAE +F M++AG PNL
Sbjct: 406 GYLSDALKLADEMLQVQ-VGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKT 464
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLL-NVMTQTPKEE----LGKLV 341
T+L+ + K +R ++ + L + E I PD G ++ + +Q EE + ++
Sbjct: 465 YTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMK 524
Query: 342 ECVEKSNSKLGYVVKL 357
C ++NS + Y +++
Sbjct: 525 ACGIRANSVI-YTIRM 539
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 92 EKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLN--VYEEMKAIGVKPNMITYNNL 149
E++ +R ++R+ P A S LY A G L+ + +M G+ ++ TYN +
Sbjct: 199 EEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIM 258
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ M + K+++ +M GL+P+ TY SL+ YG+ +++ ++ EMK+ G
Sbjct: 259 IGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGC 318
Query: 210 QLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAE 269
+ V YN L+ +AF +MK+S +P+ T+S++I + +A
Sbjct: 319 EPDVITYNALINCFCKYEQMPKAFHFLHEMKNS-GLKPNVVTYSTLIDALCKEHMLQQAI 377
Query: 270 AMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGI 315
+M G PN F TSLI KA D ++ + + ++ +
Sbjct: 378 KFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQV 423
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 15/257 (5%)
Query: 117 LYGTA-------GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
LYGT + C V EMKA G++ N + Y +D + + + + +EM
Sbjct: 499 LYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEM 558
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL-SVTLYNTLLAMCADVGY 228
D G+ T+ L+ + E+ + + M + +Q +V + L+ Y
Sbjct: 559 CDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNY 618
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLT 288
+ A ++F++M+ +N PD ++++I EA + + M E G E +L T
Sbjct: 619 IEAAKKLFDEMQ-DKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYT 677
Query: 289 SLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEELGKLVECVEKSN 348
SL+ + LN + GI PD+ C LL ELG + E +E +
Sbjct: 678 SLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLR-----KYYELGSIDEAIELHD 732
Query: 349 SKLGYV-VKLLLEEQDI 364
L V + LLEEQ++
Sbjct: 733 ELLKKVPLDELLEEQNL 749
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ MT + P + + L + G+ + +R+M G+ SV YN ++
Sbjct: 205 FSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCK 264
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G A +F MK PD T++S+I G + E+ +F EM + G EP++
Sbjct: 265 EGDMVTAKSLFHQMKQM-GLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVI 323
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+LI C+ K ++ L+ + G+ P+
Sbjct: 324 TYNALINCFCKYEQMPKAFHFLHEMKNSGLKPN 356
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFSTLIKLY-GTAGN--FDGCLNVYEEMKAIGVKPNMITY 146
L E++ D AR + + PN + L G N + +++EM+ + P+ I Y
Sbjct: 582 LVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAY 641
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
L+D + K + I M++ G+ + + Y SL+ + + EM
Sbjct: 642 TALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIG 701
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDM 239
KG+ L LL ++G DEA E+ +++
Sbjct: 702 KGIVPDEILCIRLLRKYYELGSIDEAIELHDEL 734
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 100 RNEKWRIDPN--AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAK 157
R ++ + PN +++TLI Y + GN D +++ +MK+ G P++ TYN L+ AK
Sbjct: 329 RMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAK 388
Query: 158 RPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYN 217
V + +EM GLSP+ TY L+ A R+ E +Y M++ G+ + +Y
Sbjct: 389 NSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYG 448
Query: 218 TLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLE 277
L+ VG EA ++F+ + + +P+ +++MI G A + EM E
Sbjct: 449 VLIHGLCVVGDMKEASKLFKSLDEM-HLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGE 507
Query: 278 AGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
G PN+ S IQ K ++ + L + ELG+ P
Sbjct: 508 NGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKP 547
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
++D +F +IK G D V +M+ +G+ PN++ Y L+D + + K
Sbjct: 161 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 220
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ +M + + N TY L+ + + +D + +Y +MK G+ +V YN+++ C
Sbjct: 221 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 280
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPN 283
+ G + AFE+F++M+ + T++++I +C R +V EAE + M G PN
Sbjct: 281 NDGKLNNAFELFDEMR-ERGVACNVVTYNTLIGGLCQER-RVLEAERLMCRMKRDGLSPN 338
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITP 317
L +LI Y D N++ G +P
Sbjct: 339 LISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSP 372
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 38/266 (14%)
Query: 90 LKEKSYDTRARNEKWRIDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYN 147
LK+ + + + I PN ++ ++I G + +++EM+ GV N++TYN
Sbjct: 249 LKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYN 308
Query: 148 NLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEK 207
L+ + + +R + + + M +GLSPN +Y +L+ Y + S++ +MK
Sbjct: 309 TLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSS 368
Query: 208 GMQLSVTLYNTLLAMCAD----VGYTD-------------------------------EA 232
G S+ YN L+A ++ G TD +A
Sbjct: 369 GQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKA 428
Query: 233 FEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQ 292
F+I+ M+ + D + + +I G + EA +F + E +PN + ++I
Sbjct: 429 FQIYSSMEKA-GLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIY 487
Query: 293 CYGKAQRTDDVVRALNRLPELGITPD 318
Y K + +R L + E G+ P+
Sbjct: 488 GYCKEGSSYRALRLLKEMGENGMVPN 513
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Query: 142 NMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVY 201
+++ + +++ R++ P Q + +M GL P NT+ +LL ++ + E V+
Sbjct: 94 HVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 153
Query: 202 REMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSC 261
E K ++L V + ++ C +VGY D+ FE+ M+ P+ ++++I C
Sbjct: 154 NETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEM-GLSPNVVVYTTLIDGCCK 211
Query: 262 RGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + + +F +M E N + T LI + K D + ++ GI P+
Sbjct: 212 NGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPN 268
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 92 EKSYDTRARNEKWRI--DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNL 149
EK++ + EK + D + LI G+ +++ + + +KPN + YN +
Sbjct: 426 EKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM 485
Query: 150 LDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGM 209
+ + ++ + KEM +NG+ PN +Y S ++ + + + ++M E G+
Sbjct: 486 IYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGL 545
Query: 210 QLSVTLYNTL 219
+ S++++N +
Sbjct: 546 KPSISIWNMI 555
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 9/221 (4%)
Query: 110 AFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+F+T+I AG+ DG ++ M GV P++ TY L+ + R R + ++++M
Sbjct: 277 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 336
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
G+ PN + L+ A+ + E L ++REM+E+G++ YN ++
Sbjct: 337 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 396
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
A I +M+S+ +PD+ T++++I ++ A + M+ G + T+
Sbjct: 397 KSASGIVVEMRSA-GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 455
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
LI KA R+ D R L + E G+ PD D FC
Sbjct: 456 LISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFC 496
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 149/316 (47%), Gaps = 11/316 (3%)
Query: 111 FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMT 170
F+ L++ G NV++EM++ GV+ ++++N ++ M RA +T+++ M+
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302
Query: 171 DNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTD 230
+ G++P+ TY +L++ R ED V+ +M +GM+ + ++ L+ G +
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362
Query: 231 EAFEIFEDMKSSENCQPDSWTFSSMIT-ICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
E+ +M+ +PD+ T+++++ +C R + A + EM AG P+ T+
Sbjct: 363 TMLELHREMR-ERGVRPDAVTYNAIVNGLCRAR-DLKSASGIVVEMRSAGLRPDTVTYTT 420
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPKEE-----LGKLVEC- 343
LI Y K + D + + G+ D+ L++ +++ + LG+++E
Sbjct: 421 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 480
Query: 344 VEKSNSKLGYVVKLLLEEQDIEGDFKKEATELFNSISKDVKKAYCNCLIDLCVNLNLLEN 403
+E N+ V+ + D++ + E+ N K Y N +++ L ++N
Sbjct: 481 LEPDNTTYTMVIDAFCRKGDVKTGLRL-LKEMQNKGRKPGVVTY-NVIMNGFCKLGQMKN 538
Query: 404 ACKLLELGLTLEVYTD 419
A LL + + V D
Sbjct: 539 ADMLLNAMINIGVSPD 554
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 6/229 (2%)
Query: 96 DTRARNEKW---RIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLL 150
D R EK + PNA F+ LI + G+ + L ++ EM+ GV+P+ +TYN ++
Sbjct: 328 DARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIV 387
Query: 151 DTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQ 210
+ + RA+ I EM GL P+ TY +L+ Y + + + + + M +G+
Sbjct: 388 NGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVG 447
Query: 211 LSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEA 270
L Y L++ + G + +A + +M + +PD+ T++ +I +G V
Sbjct: 448 LDEVTYTALISGLSKAGRSADAERVLGEMMEA-GLEPDNTTYTMVIDAFCRKGDVKTGLR 506
Query: 271 MFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDD 319
+ EM G +P + ++ + K + + LN + +G++PDD
Sbjct: 507 LLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDD 555
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 4/207 (1%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D + LI+ G + V+E+M G+KPN + + L+D + + ++
Sbjct: 309 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 368
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+EM + G+ P+ TY +++ RAR + + EM+ G++ Y TL+
Sbjct: 369 REMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKE 428
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
D A EI ++M +E D T++++I+ S G+ ++AE + EM+EAG EP+
Sbjct: 429 EELDMAMEIKQNM-VAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTT 487
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPEL 313
T +I + R DV L L E+
Sbjct: 488 YTMVIDAF---CRKGDVKTGLRLLKEM 511
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 5/207 (2%)
Query: 86 RASKLKEKS-YDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMI 144
RA LK S R+ R D ++TLI Y D + + + M A GV + +
Sbjct: 392 RARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEV 451
Query: 145 TYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREM 204
TY L+ + +A R + + EM + GL P+ TY ++ A+ R + L + +EM
Sbjct: 452 TYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEM 511
Query: 205 KEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGK 264
+ KG + V YN ++ +G A + M + PD T++ ++ GK
Sbjct: 512 QNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINI-GVSPDDITYNILLDGHCKHGK 570
Query: 265 VSEAEAMFNEMLEAGFEPNLFVLTSLI 291
V++ E + + G P+L V TS++
Sbjct: 571 VTDIEELKS---AKGTVPDLGVYTSIV 594
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
Y ++ D GL P + L+R R +V+ EM+ +G++ +V +NT+++
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
G D A + M S PD +T+ ++I G++ +A +F +M G +PN
Sbjct: 288 AGDLDGAETLHRRM-SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV 346
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
V T LI + K + ++ + E G+ PD
Sbjct: 347 VFTILIDAHCKKGDAETMLELHREMRERGVRPD 379
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 100 RNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRP 159
R R D ++ ++ A + + EM++ G++P+ +TY L+D + +
Sbjct: 372 RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEEL 431
Query: 160 WQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTL 219
I + M G+ + TY +L+ +A D V EM E G++ T Y +
Sbjct: 432 DMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMV 491
Query: 220 LAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAG 279
+ G + ++M++ +P T++ ++ G++ A+ + N M+ G
Sbjct: 492 IDAFCRKGDVKTGLRLLKEMQNKGR-KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550
Query: 280 FEPNLFVLTSLI--QC-YGKAQRTDDVVRALNRLPELGI 315
P+ L+ C +GK +++ A +P+LG+
Sbjct: 551 VSPDDITYNILLDGHCKHGKVTDIEELKSAKGTVPDLGV 589
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 199 SVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITI 258
+ Y ++ + G+ L+N L+ +G A +F++M+ S + +F++MI+
Sbjct: 226 AFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQ-SRGVRRTVVSFNTMISG 284
Query: 259 CSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
G + AE + M EAG P+++ +LIQ + R +D ++ G+ P+
Sbjct: 285 MCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN 344
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
++++ M++IG+ P ++TYN+L+ M + + Q ++KEM + + P+ T++ L+ A
Sbjct: 264 VDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDA 323
Query: 188 YGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQP 247
+ + LSV+ +M + M+ + Y++L+ E+ + +M S N +P
Sbjct: 324 LCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML-SRNIRP 382
Query: 248 DSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRAL 307
D TFS + + +G VSEA+++ N M+E G PN+ SL+ Y + D+ +
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442
Query: 308 NRLPELGITPD 318
+ + G PD
Sbjct: 443 DIMVNKGCAPD 453
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 6/282 (2%)
Query: 103 KWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPW 160
+W + P+ FS L+ G L+V+ +M I ++P+++TY++L+ + ++
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366
Query: 161 QVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL 220
+ T+ EM + P+ T++ + + + + S+ M E+G++ +V YN+L+
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM 426
Query: 221 AMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
DEA ++F D+ ++ C PD +++ +I ++ EA+ +F+EM G
Sbjct: 427 DGYCLHSQMDEARKVF-DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGL 485
Query: 281 EPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTPK-EELGK 339
PN T+LI +A R ++ G PD LL+ + +E
Sbjct: 486 TPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALA 545
Query: 340 LVECVEKSNSKLGYVV-KLLLEEQDIEGDFKKEATELFNSIS 380
L E ++KS K +V+ K+LL G ++A ELF+S+S
Sbjct: 546 LFEALKKSQLKPNHVICKILLGGMCKAGKL-EDAKELFSSLS 586
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 105 RIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKT 164
R D FS + ++ G ++ M G++PN++TYN+L+D + + +
Sbjct: 381 RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARK 440
Query: 165 IYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCA 224
++ M + G +P+ +Y L++ Y ++ ++ ++ EM KG+ + + TL++
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500
Query: 225 DVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNL 284
G A E+F+ M S C PD T+S++++ G + EA A+F + ++ +PN
Sbjct: 501 QAGRPYAAKELFKKM-GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNH 559
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ L+ KA + +D + L + PD
Sbjct: 560 VICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 112/233 (48%), Gaps = 3/233 (1%)
Query: 88 SKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGT--AGNFDGCLNVYEEMKAIGVKPNMIT 145
++L ++ D I P + +YG +G + +++EM +KP+++T
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316
Query: 146 YNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMK 205
++ L+D + + + +++ +M + P+ TY+SL+ ++ +++ ++ EM
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376
Query: 206 EKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKV 265
+ ++ V ++ + + G EA I ++ +P+ T++S++ ++
Sbjct: 377 SRNIRPDVVTFSIWVDVFCKKGMVSEAQSII-NLMIERGLRPNVVTYNSLMDGYCLHSQM 435
Query: 266 SEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
EA +F+ M+ G P++ LI+ Y K++R D+ + + + G+TP+
Sbjct: 436 DEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 78 IWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAI 137
IWV+ + + +S R + +++L+ Y D V++ M
Sbjct: 389 IWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNK 448
Query: 138 GVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDT 197
G P++++YN L+ +++R + K ++ EM+ GL+PN T+ +L+ +A
Sbjct: 449 GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAA 508
Query: 198 LSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMIT 257
++++M G + Y+TLL+ G+ DEA +FE +K S+ +P+ ++
Sbjct: 509 KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQ-LKPNHVICKILLG 567
Query: 258 ICSCRGKVSEAEAMFNEMLEAGFEPNL 284
GK+ +A+ +F+ + +P++
Sbjct: 568 GMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 3/200 (1%)
Query: 119 GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNW 178
G+ NFD L + +M + P + +N LL + R K V +IY++M G+S +
Sbjct: 80 GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139
Query: 179 NTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLL-AMCADVGYTDEAFEIFE 237
T L+ SV ++ + G + S+ +NTL+ +C + G EA E
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIE-GRIVEAMEQL- 197
Query: 238 DMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKA 297
D S QP +T + ++ GK S A +M+E EP + + +I K
Sbjct: 198 DYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKN 257
Query: 298 QRTDDVVRALNRLPELGITP 317
+ ++ V + +GI+P
Sbjct: 258 RLVNEAVDLFYHMRSIGISP 277
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Query: 166 YKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCAD 225
+ +M P + LL A R ++ + +S+YR+M+ G+ SV L+
Sbjct: 92 FNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCH 151
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLF 285
+ F + + +P TF+++I G++ EA + ++ G++P ++
Sbjct: 152 LHLVGLGFSVLGKI-FKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVY 210
Query: 286 VLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
T ++ K +T + + ++ EL P+
Sbjct: 211 THTMIVNGLCKIGKTSAAIVWMKKMVELDCEPE 243
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +S +I N D +N+ EMK + PN+ TYN+L+D + + + +VKT+
Sbjct: 202 DVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLL 261
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
EM + ++PN +T++ L+ + ED V R M EKG++ + Y+ ++
Sbjct: 262 SEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLR 321
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFV 286
G D A +F ++ + +P+ +++S +I + +++A +F E+ + G +P+
Sbjct: 322 GQVDRARRVFNVLR-DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT 380
Query: 287 LTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
++++ + R D + + + +G TPD
Sbjct: 381 YSTILHGLIEVGRIGDAKKIFDEMLRVGPTPD 412
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 106 IDPNAFS--TLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
I PN FS LI Y N + ++ E+ G+KP+ +TY+ +L + R K
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAK 398
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
I+ EM G +P+ +++LL Y + E+ + ++ +++ +++ Y ++
Sbjct: 399 KIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGL 458
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
EA IFE + S PD T++ MIT G E + + +M + G N
Sbjct: 459 CKNDRVREAHAIFEKLPSI-GLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPAN 517
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQTP 333
++Q + ++ + ++V + + G + D G L+NV+ + P
Sbjct: 518 NITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENP 567
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 8/209 (3%)
Query: 117 LYGTA-------GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEM 169
+YGT G+ + L++ M+ KP++ TY+ ++D + + + EM
Sbjct: 170 MYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM 229
Query: 170 TDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYT 229
+ PN TY SL+ + E ++ EM + +V ++ L+ G
Sbjct: 230 KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289
Query: 230 DEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTS 289
++A E+ M + +PD T+S+++ RG+V A +FN + + G +PN+F +
Sbjct: 290 EDADEVMRHM-IEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348
Query: 290 LIQCYGKAQRTDDVVRALNRLPELGITPD 318
LI Y K + ++ + + G+ PD
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPD 377
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 140 KPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLS 199
+PN + Y +++ + + + ++ + M P+ TY+ ++ A + + ++
Sbjct: 165 EPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAIN 224
Query: 200 VYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITIC 259
+ EMK+K + ++ YN+L+ +G ++ + +M + N P+ TFS +I
Sbjct: 225 LLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM-VNLNINPNVHTFSILIDGL 283
Query: 260 SCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
GKV +A+ + M+E G EP++ ++++ Y + D R N L + GI P+
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 84/195 (43%)
Query: 124 FDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYAS 183
D ++++ M + P++I ++ L TM K V ++++EM G+ + +
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 184 LLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSE 243
+ +Y + SV + G+ +V +NTLL +A +F+ + +
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 244 NCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDV 303
C+P+ + +++ S RG + ++ M + +P++ + +I K D
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222
Query: 304 VRALNRLPELGITPD 318
+ LN + + I P+
Sbjct: 223 INLLNEMKQKNIPPN 237
>gi|219363531|ref|NP_001137052.1| uncharacterized protein LOC100217224 [Zea mays]
gi|194698168|gb|ACF83168.1| unknown [Zea mays]
Length = 338
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 110 AFSTLIKLY-GTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKE 168
+F+TLI Y +G + L + E M+ G+ PN +TYN ++ + + R Q + I E
Sbjct: 82 SFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLCKEGRMHQARRIVNE 141
Query: 169 MTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGY 228
M G++PN T+ +L+ +Y E + ++ EM + G+ + YN L+ + G
Sbjct: 142 MRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLVTYNALILGLCNEGK 201
Query: 229 TDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSE-AEAMFNEMLEAGFEPNLFVL 287
T +A ++ +++ +++ +P++ TFS++I I C+ + E A + N M +AGF+PN +
Sbjct: 202 TWKASQLVQELCAAK-LEPNASTFSALI-IGQCKKQNPERALDLLNAMKKAGFQPNYYTY 259
Query: 288 TSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ LI + K + + + L + I PD
Sbjct: 260 SILISTFSKNKDFEGAIDVLKDMLMRCIAPD 290
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 106 IDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ PN F+TLI Y T G+ + + ++EEM G+ +++TYN L+ + + W+
Sbjct: 147 VTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLVTYNALILGLCNEGKTWKAS 206
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+ +E+ L PN +T+++L+ + + E L + MK+ G Q + Y+ L++
Sbjct: 207 QLVQELCAAKLEPNASTFSALIIGQCKKQNPERALDLLNAMKKAGFQPNYYTYSILISTF 266
Query: 224 ADVGYTDEAFEIFEDM 239
+ + A ++ +DM
Sbjct: 267 SKNKDFEGAIDVLKDM 282
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 2/186 (1%)
Query: 134 MKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARY 193
M+A G+ P + + N + R +RP + ++EM +SPN T ++RA
Sbjct: 1 MRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKCALGR 60
Query: 194 GEDTLSVYREMKEKGMQLSVTLYNTLLAM-CADVGYTDEAFEIFEDMKSSENCQPDSWTF 252
D + EM G + +NTL+A C D G + + E M+ E P+ T+
Sbjct: 61 VVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERME-REGLVPNEVTY 119
Query: 253 SSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPE 312
++++ G++ +A + NEM G PN +LI Y + ++ + +
Sbjct: 120 NTIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMK 179
Query: 313 LGITPD 318
G++ D
Sbjct: 180 AGLSAD 185
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 128 LNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRA 187
++ + EM+ V PN+ T N ++ R + EM G S ++ +L+ A
Sbjct: 30 ISFFREMRRCRVSPNVYTVNMVMRAKCALGRVVDAAQLLDEMPCWGFSRTAASFNTLIAA 89
Query: 188 YGRARYGEDTLSVYRE-MKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQ 246
Y G +T+ +E M+ +G+ + YNT++ G +A I +M+ +
Sbjct: 90 YCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLCKEGRMHQARRIVNEMR-VKGVT 148
Query: 247 PDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLI 291
P++ TF+++I G A M EM++AG +L +LI
Sbjct: 149 PNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLVTYNALI 193
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 3/232 (1%)
Query: 89 KLKEKSYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITY 146
KL +++D + I P+ +S LI + G + + ++ +M + + P++ T+
Sbjct: 210 KLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTF 269
Query: 147 NNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKE 206
+ L+D + R + K + M G+ P+ TY SL+ Y + S++ M +
Sbjct: 270 SILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ 329
Query: 207 KGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVS 266
G+ +V YN ++ + DEA +F++M +N PD T++S+I GK+S
Sbjct: 330 GGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMH-CKNIIPDVVTYNSLIDGLCKSGKIS 388
Query: 267 EAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
A + +EM + G + S++ K + D + L ++ + GI PD
Sbjct: 389 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 7/257 (2%)
Query: 62 NPQYPHGKTGSSPKSYIWVNPKSPRASKLKEKSYDTRARNEKWRIDPNAFSTLIKLYGTA 121
NP P + G S + +N S +E ++ A D F+ LI +
Sbjct: 51 NPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIAS------DLVTFNILINCFSQL 104
Query: 122 GNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTY 181
G+ +V+ + G +PN IT L+ + + Q + ++ G N Y
Sbjct: 105 GHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCY 164
Query: 182 ASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADVGYTDEAFEIFEDMKS 241
+L+ + L + R + K +Q +V +YNT++ V +EAF+++ +M
Sbjct: 165 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM-V 223
Query: 242 SENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPNLFVLTSLIQCYGKAQRTD 301
S+ PD T+S++I+ GK+++A +FN+M+ P+++ + L+ + K R
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283
Query: 302 DVVRALNRLPELGITPD 318
+ L + + GI PD
Sbjct: 284 EAKNVLAMMMKQGIKPD 300
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 113/245 (46%), Gaps = 3/245 (1%)
Query: 94 SYDTRARNEKWRIDPNA--FSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLD 151
S+ A K +PNA +TLIK G L+ ++++ A+G N + Y L++
Sbjct: 110 SFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLIN 169
Query: 152 TMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQL 211
+ + + + + + + PN Y +++ + + + + +Y EM KG+
Sbjct: 170 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 229
Query: 212 SVTLYNTLLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAM 271
V Y+ L++ +G ++A +F M SE PD +TFS ++ G+V EA+ +
Sbjct: 230 DVVTYSALISGFCILGKLNDAIGLFNKM-ISEEINPDVYTFSILVDGFCKEGRVKEAKNV 288
Query: 272 FNEMLEAGFEPNLFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPDDRFCGCLLNVMTQ 331
M++ G +P++ SL+ Y ++ + N + + G+T + + ++N +
Sbjct: 289 LAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCK 348
Query: 332 TPKEE 336
K +
Sbjct: 349 IKKVD 353
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Query: 102 EKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQ 161
E+ D FS L+ + G NV M G+KP+++TY +L+D K+ +
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNK 319
Query: 162 VKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLA 221
K+I+ M G++ N +Y ++ + + + ++ +++++EM K + V YN+L+
Sbjct: 320 AKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLID 379
Query: 222 MCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFE 281
G A ++ ++M D T++S++ +V +A A+ +M + G +
Sbjct: 380 GLCKSGKISYALKLVDEMH-DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ 438
Query: 282 PNLFVLTSLIQCYGKAQRTDD 302
P+++ T LI K R D
Sbjct: 439 PDMYTYTILIDGLCKGGRLKD 459
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Query: 104 WRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVK 163
+ ++ + TLI G L + + V+PN++ YN ++D+M + K +
Sbjct: 157 FHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 216
Query: 164 TIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMC 223
+Y EM G+SP+ TY++L+ + D + ++ +M + + V ++ L+
Sbjct: 217 DLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGF 276
Query: 224 ADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGFEPN 283
G EA + M + +PD T+ S++ +V++A+++FN M + G N
Sbjct: 277 CKEGRVKEAKNVLA-MMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTAN 335
Query: 284 LFVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD 318
+ +I + K ++ D+ + + I PD
Sbjct: 336 VQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPD 370
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 107 DPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKRPWQVKTIY 166
D +++LI +G L + +EM GV + ITYN++LD + + + + +
Sbjct: 370 DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 429
Query: 167 KEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNTLLAMCADV 226
+M D G+ P+ TY L+ + +D +++ ++ KG ++V Y ++ D
Sbjct: 430 TKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDN 489
Query: 227 GYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEAGF 280
D+A + M+ + C P++ T+ +I + + AE + EM+ G
Sbjct: 490 DLFDKALALLSKMEDN-GCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Query: 99 ARNEKWRIDPNAFSTLIKLYGTAGNFDGCLNVYEEMKAIGVKPNMITYNNLLDTMGRAKR 158
A + + I N F + K+ D +N+++EM + P+++TYN+L+D + ++ +
Sbjct: 334 ANVQSYNIMINGFCKIKKV-------DEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386
Query: 159 PWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSVYREMKEKGMQLSVTLYNT 218
+ EM D G+ + TY S+L A + + +++ +MK++G+Q + Y
Sbjct: 387 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTI 446
Query: 219 LLAMCADVGYTDEAFEIFEDMKSSENCQPDSWTFSSMITICSCRGKVSEAEAMFNEMLEA 278
L+ G +A IFED+ + +T++ MI +A A+ ++M +
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDL-LVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDN 505
Query: 279 GFEPN 283
G PN
Sbjct: 506 GCIPN 510
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/226 (18%), Positives = 92/226 (40%), Gaps = 46/226 (20%)
Query: 141 PNMITYNNLLDTMGRAKRPWQVKTIYKEMTDNGLSPNWNTYASLLRAYGRARYGEDTLSV 200
P + + +L ++ + ++++EM NG++ + T+ L+ + + + + SV
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 201 YREMKEK-----------------------------------GMQLSVTLYNTLLAMCAD 225
+ + +K G L+ Y TL+
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173
Query: 226 VGYTDEAFEIFEDMKSSENCQPDSWTFSSMI-TICSCRGKVSEAEAMFNEMLEAGFEPNL 284
VG T A ++ + + QP+ ++++I ++C + V+EA +++EM+ G P++
Sbjct: 174 VGQTSAALQLLRRV-DGKLVQPNVVMYNTIIDSMCKVK-LVNEAFDLYSEMVSKGISPDV 231
Query: 285 FVLTSLIQCYGKAQRTDDVVRALNRLPELGITPD--------DRFC 322
++LI + + +D + N++ I PD D FC
Sbjct: 232 VTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFC 277
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,288,678,408
Number of Sequences: 23463169
Number of extensions: 341416154
Number of successful extensions: 1035453
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7429
Number of HSP's successfully gapped in prelim test: 4399
Number of HSP's that attempted gapping in prelim test: 901768
Number of HSP's gapped (non-prelim): 67959
length of query: 533
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 386
effective length of database: 8,910,109,524
effective search space: 3439302276264
effective search space used: 3439302276264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)