Query 009507
Match_columns 533
No_of_seqs 374 out of 2333
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 13:57:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009507.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009507hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2413 Xaa-Pro aminopeptidase 100.0 2E-117 5E-122 919.9 33.2 493 5-530 106-606 (606)
2 COG0006 PepP Xaa-Pro aminopept 100.0 5.8E-63 1.2E-67 520.2 35.2 361 69-483 4-379 (384)
3 PRK09795 aminopeptidase; Provi 100.0 8.4E-62 1.8E-66 507.2 36.4 345 77-487 2-356 (361)
4 TIGR02993 ectoine_eutD ectoine 100.0 1.7E-59 3.8E-64 493.9 32.9 359 69-487 5-388 (391)
5 PRK14575 putative peptidase; P 100.0 4.7E-57 1E-61 477.2 34.4 356 78-487 12-403 (406)
6 PRK14576 putative endopeptidas 100.0 1.9E-55 4.2E-60 464.7 34.8 355 79-487 13-402 (405)
7 PRK10879 proline aminopeptidas 100.0 4.3E-51 9.2E-56 434.8 31.5 357 72-485 3-426 (438)
8 PRK15173 peptidase; Provisiona 100.0 3.2E-51 7E-56 419.9 27.7 279 156-487 36-320 (323)
9 PRK13607 proline dipeptidase; 100.0 1.3E-45 2.7E-50 392.1 28.4 232 222-479 148-438 (443)
10 PRK12897 methionine aminopepti 100.0 1.7E-45 3.8E-50 364.9 24.6 221 234-479 3-247 (248)
11 cd01085 APP X-Prolyl Aminopept 100.0 2.8E-45 6.1E-50 357.1 25.1 217 243-462 1-219 (224)
12 PRK07281 methionine aminopepti 100.0 5.4E-45 1.2E-49 365.9 24.2 228 232-484 1-284 (286)
13 PRK12318 methionine aminopepti 100.0 2E-44 4.4E-49 363.8 25.0 229 228-481 35-290 (291)
14 TIGR00500 met_pdase_I methioni 100.0 9E-44 1.9E-48 352.6 24.4 221 234-479 2-246 (247)
15 PRK05716 methionine aminopepti 100.0 2.7E-43 5.8E-48 350.2 24.6 226 232-482 2-251 (252)
16 PRK12896 methionine aminopepti 100.0 1.4E-42 3E-47 345.7 24.0 224 231-479 6-254 (255)
17 cd01090 Creatinase Creatine am 100.0 1.9E-42 4.2E-47 338.5 23.1 213 241-478 1-227 (228)
18 cd01087 Prolidase Prolidase. E 100.0 1.5E-42 3.1E-47 343.1 22.2 212 241-479 1-243 (243)
19 KOG2737 Putative metallopeptid 100.0 1.4E-42 3.1E-47 341.5 19.9 241 227-489 177-476 (492)
20 PLN03158 methionine aminopepti 100.0 2.1E-41 4.5E-46 352.4 26.1 235 227-485 129-387 (396)
21 KOG2414 Putative Xaa-Pro amino 100.0 4.5E-41 9.7E-46 334.5 26.5 372 54-485 42-478 (488)
22 cd01092 APP-like Similar to Pr 100.0 4.6E-40 1E-44 317.1 23.2 204 241-460 1-206 (208)
23 cd01086 MetAP1 Methionine Amin 100.0 1.3E-39 2.8E-44 321.0 22.9 214 241-479 1-238 (238)
24 cd01091 CDC68-like Related to 100.0 1.3E-39 2.8E-44 320.7 21.4 217 241-479 1-243 (243)
25 PF00557 Peptidase_M24: Metall 100.0 1.9E-38 4.1E-43 306.0 19.1 203 242-459 1-207 (207)
26 cd01066 APP_MetAP A family inc 100.0 2.4E-36 5.1E-41 289.4 23.4 203 241-460 1-205 (207)
27 cd01089 PA2G4-like Related to 100.0 5.5E-36 1.2E-40 293.2 20.7 211 241-478 1-227 (228)
28 COG0024 Map Methionine aminope 100.0 5.9E-31 1.3E-35 255.9 23.9 222 235-481 5-253 (255)
29 TIGR00495 crvDNA_42K 42K curve 100.0 6.5E-30 1.4E-34 266.9 25.3 199 233-442 11-232 (389)
30 PTZ00053 methionine aminopepti 100.0 2.4E-30 5.2E-35 271.7 21.0 196 233-442 150-360 (470)
31 PRK08671 methionine aminopepti 100.0 3.2E-30 7E-35 260.9 21.3 195 240-450 1-196 (291)
32 TIGR00501 met_pdase_II methion 100.0 6.1E-30 1.3E-34 259.1 20.7 198 239-452 3-201 (295)
33 cd01088 MetAP2 Methionine Amin 100.0 7.9E-29 1.7E-33 250.8 20.4 195 241-451 1-196 (291)
34 KOG2738 Putative methionine am 100.0 2.3E-27 4.9E-32 227.9 20.0 225 232-480 113-360 (369)
35 KOG1189 Global transcriptional 99.9 1.7E-23 3.7E-28 221.5 24.4 336 103-492 21-390 (960)
36 COG5406 Nucleosome binding fac 99.7 1.1E-16 2.5E-21 166.9 18.5 231 220-460 155-410 (1001)
37 PF01321 Creatinase_N: Creatin 99.4 2.4E-13 5.2E-18 120.8 6.0 128 78-235 1-132 (132)
38 KOG2775 Metallopeptidase [Gene 99.3 8.1E-11 1.8E-15 114.3 13.9 181 250-439 90-284 (397)
39 KOG2776 Metallopeptidase [Gene 99.2 1.6E-09 3.4E-14 108.2 19.7 158 230-396 10-182 (398)
40 KOG2413 Xaa-Pro aminopeptidase 97.4 0.00041 8.9E-09 74.5 8.0 106 78-193 11-132 (606)
41 PLN03158 methionine aminopepti 96.9 0.0033 7.1E-08 66.5 9.0 113 338-458 127-246 (396)
42 cd01086 MetAP1 Methionine Amin 96.6 0.011 2.5E-07 57.9 9.9 99 353-459 2-105 (238)
43 cd01088 MetAP2 Methionine Amin 96.2 0.03 6.4E-07 57.0 10.2 85 353-445 2-87 (291)
44 COG0024 Map Methionine aminope 95.9 0.032 7E-07 55.2 8.2 90 354-448 13-106 (255)
45 PRK05716 methionine aminopepti 95.8 0.064 1.4E-06 53.1 10.0 95 354-457 13-113 (252)
46 PRK12896 methionine aminopepti 95.2 0.093 2E-06 52.0 8.9 106 343-457 5-118 (255)
47 KOG2738 Putative methionine am 93.4 0.27 5.8E-06 49.0 7.4 100 354-460 124-227 (369)
48 PF05195 AMP_N: Aminopeptidase 92.7 0.32 6.9E-06 43.5 6.5 97 72-178 3-127 (134)
49 TIGR00495 crvDNA_42K 42K curve 91.8 1.3 2.9E-05 46.9 10.7 102 355-459 22-130 (389)
50 PRK08671 methionine aminopepti 91.1 2.2 4.7E-05 43.4 11.1 94 354-457 4-99 (291)
51 TIGR00501 met_pdase_II methion 90.7 2.2 4.7E-05 43.5 10.7 94 354-457 7-102 (295)
52 cd01092 APP-like Similar to Pr 90.4 1.8 3.8E-05 41.1 9.4 96 354-458 3-99 (208)
53 PRK12897 methionine aminopepti 90.3 2.1 4.5E-05 42.3 10.0 91 356-457 14-112 (248)
54 cd01087 Prolidase Prolidase. E 89.4 3.3 7.1E-05 40.6 10.6 94 354-457 3-97 (243)
55 PF00557 Peptidase_M24: Metall 89.2 2.3 5E-05 40.4 9.1 94 354-457 2-98 (207)
56 PTZ00053 methionine aminopepti 88.4 3.8 8.2E-05 44.4 10.8 97 351-457 153-261 (470)
57 cd01090 Creatinase Creatine am 88.1 3.8 8.3E-05 40.0 9.9 95 354-457 3-104 (228)
58 PRK07281 methionine aminopepti 87.9 3.3 7.1E-05 42.0 9.6 82 355-441 13-101 (286)
59 TIGR00500 met_pdase_I methioni 87.1 4.6 0.0001 39.7 10.0 93 356-457 13-111 (247)
60 cd01089 PA2G4-like Related to 86.7 6 0.00013 38.5 10.4 99 354-458 3-111 (228)
61 cd01066 APP_MetAP A family inc 86.6 3.7 7.9E-05 38.4 8.7 95 354-457 3-97 (207)
62 PRK12318 methionine aminopepti 85.1 7.1 0.00015 39.7 10.3 94 356-457 53-153 (291)
63 cd01085 APP X-Prolyl Aminopept 73.4 16 0.00035 35.5 8.2 96 354-457 5-106 (224)
64 PRK10879 proline aminopeptidas 73.2 26 0.00057 37.8 10.5 91 356-457 183-276 (438)
65 PRK09795 aminopeptidase; Provi 72.6 20 0.00044 37.4 9.3 91 356-457 137-230 (361)
66 PRK14575 putative peptidase; P 71.7 25 0.00055 37.4 9.9 92 356-457 188-280 (406)
67 PF14826 FACT-Spt16_Nlob: FACT 70.8 10 0.00022 35.1 5.8 58 73-138 4-79 (163)
68 PRK14576 putative endopeptidas 69.0 34 0.00073 36.5 10.1 92 356-457 187-279 (405)
69 COG0006 PepP Xaa-Pro aminopept 67.8 29 0.00063 36.5 9.3 95 354-457 162-257 (384)
70 PRK15173 peptidase; Provisiona 64.5 47 0.001 34.2 9.9 92 356-457 105-197 (323)
71 KOG2775 Metallopeptidase [Gene 63.0 31 0.00067 34.9 7.6 83 356-445 89-177 (397)
72 TIGR03241 arg_catab_astB succi 61.2 23 0.00051 37.1 6.6 190 16-279 205-416 (443)
73 cd01091 CDC68-like Related to 58.5 46 0.001 32.8 8.2 99 244-350 121-234 (243)
74 PF14980 TIP39: TIP39 peptide 56.8 7.2 0.00016 27.9 1.5 19 490-508 28-47 (51)
75 PF01321 Creatinase_N: Creatin 53.8 12 0.00027 32.2 2.9 40 7-50 90-129 (132)
76 KOG2776 Metallopeptidase [Gene 51.5 63 0.0014 33.6 7.8 97 355-460 24-133 (398)
77 TIGR02993 ectoine_eutD ectoine 47.8 1.4E+02 0.0031 31.5 10.4 97 244-349 272-373 (391)
78 smart00862 Trans_reg_C Transcr 43.6 44 0.00096 25.8 4.5 57 20-91 7-63 (78)
79 PF04784 DUF547: Protein of un 37.2 37 0.0008 29.4 3.3 25 487-511 2-28 (117)
80 PF08003 Methyltransf_9: Prote 36.6 97 0.0021 31.7 6.5 88 6-101 136-227 (315)
81 cd00383 trans_reg_C Effector d 33.5 68 0.0015 25.8 4.2 65 10-90 13-79 (95)
82 KOG3303 Predicted alpha-helica 29.3 55 0.0012 30.7 3.1 24 492-515 109-132 (192)
83 PF04555 XhoI: Restriction end 28.6 97 0.0021 29.2 4.6 37 54-90 135-171 (196)
84 COG3642 Mn2+-dependent serine/ 27.8 41 0.00089 32.0 2.1 25 308-333 113-137 (204)
85 PRK13607 proline dipeptidase; 27.2 1.8E+02 0.004 31.4 7.3 32 355-387 170-201 (443)
86 PF00486 Trans_reg_C: Transcri 27.0 55 0.0012 25.3 2.4 56 19-90 6-61 (77)
87 PTZ00445 p36-lilke protein; Pr 22.1 3.4E+02 0.0074 26.4 7.1 80 12-103 20-104 (219)
88 cd07356 HN_L-whirlin_R1_like F 21.7 93 0.002 24.8 2.7 29 490-518 14-51 (78)
89 PF09776 Mitoc_L55: Mitochondr 20.4 60 0.0013 28.2 1.5 40 473-517 63-103 (116)
No 1
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-117 Score=919.94 Aligned_cols=493 Identities=52% Similarity=0.856 Sum_probs=462.7
Q ss_pred ccCCCCeEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhhcccCCCCCCCCccccccccccCcCHHHHHHHHHH
Q 009507 5 HQEAELALIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRS 84 (533)
Q Consensus 5 ~~~~~~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~iW~~~rP~~p~~~i~~~~~~~~g~~~~~Ki~~lr~ 84 (533)
+++.+++||+||+|+|...|+++.+.|..++.+|+++ ..||||+||+ +||++|.+|+..++.+|+|.++..|+..+|+
T Consensus 106 ~l~~~~~vG~Dp~Lis~~~~~~~~~~l~s~~~~Lv~i-~~nLVD~iW~-~rP~~~~~~v~~l~~~~~G~~~~~Kv~~LR~ 183 (606)
T KOG2413|consen 106 VLPEGSRVGIDPTLISFDAWKQLEKSLTSKGLELVPI-PGNLVDEIWG-DRPERPGNPVIVLDLEFAGLSVDDKVDNLRK 183 (606)
T ss_pred hCCCccccccCcceechhHHHhHHHHHhhCCCeEeec-cccchhhhhc-cCCccCCCceEEeeccccCcchhHHHHHHHH
Confidence 5788999999999999999999999999999999999 8999999996 9999999999999999999999999999999
Q ss_pred HHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhhhcCCeEEeeCccHHHHH
Q 009507 85 DLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVELRPYNSILSEI 164 (533)
Q Consensus 85 ~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l~~~~v~v~~y~~~~~~l 164 (533)
.|++.+++++|+|++|+|+||+|+||+||||||||+||++|+.+++.||+|+.|++.+..+++...+|+++||+++...+
T Consensus 184 ~l~~~~~~a~Vvs~LdeIaWllNLRGsDipynPv~~sY~~it~dei~lfvd~~k~~~~~~~~~~~~~v~i~pY~~i~~~i 263 (606)
T KOG2413|consen 184 KLKEKKCDAFVVTALDEIAWLLNLRGSDIPYNPVFYSYAIITMDEIFLFVDNSKLSDESKKHLREDGVEIRPYDQIWSDI 263 (606)
T ss_pred HHhhcCCcEEehhhHHHHHHHHhcccCcCCCCchhhhhhhhhhhhhheeecCcccCchhHHHHhhCceeeeeHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHHHhC--CCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchhhccCCHHHHH
Q 009507 165 KSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELE 242 (533)
Q Consensus 165 ~~l~~~--~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~ 242 (533)
+.+... ..++++.+ .+++.+...+.+ ...+...+||..+|++||+.|++
T Consensus 264 ~~~~~~~~~~~i~ia~-~~~~~i~~~i~~----------------------------~~~~~~~Spi~~~kAiKN~~E~~ 314 (606)
T KOG2413|consen 264 KNWASAFADKKIWISP-ETNYGIGELIGE----------------------------DHSMIDPSPISRAKAIKNDDELK 314 (606)
T ss_pred HHHhcccCceeEeecc-cceeeecccccc----------------------------cccccccCHHHHHHHhcChHHhh
Confidence 988753 44566655 566655544433 12345589999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEe-cCCcccccccCCCCCCccc
Q 009507 243 GMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGS-GANGAIIHYKPEPGKCSVV 321 (533)
Q Consensus 243 ~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~-G~n~a~~hy~p~~~~~~~i 321 (533)
+||.||++|++|+++++.|+++.+.++..+||.+++.+++++|..+.+|.++||+||+++ |+|+|++||+|.+++|+++
T Consensus 315 gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~G~NgAviHYsP~~e~n~~i 394 (606)
T KOG2413|consen 315 GMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSFETISSSVGPNGAVIHYSPPAETNRIV 394 (606)
T ss_pred hhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCcceeeccCCCCceeeecCCCcccccee
Confidence 999999999999999999999999544349999999999999999999999999999977 9999999999999999999
Q ss_pred CCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCc
Q 009507 322 DSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHG 401 (533)
Q Consensus 322 ~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~ 401 (533)
.+..++|||||+||.+||||+|||+++|+||+++++.||+|++||+++.+++||+|+.+..+|.+||..||+.|+||.|+
T Consensus 395 ~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~lD~laR~~LW~~gLDy~Hg 474 (606)
T KOG2413|consen 395 SPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSVLDALARSALWKAGLDYGHG 474 (606)
T ss_pred cCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcchhHHHHHHHHHhhccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCccccCCCCCCCcC-CCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCCCCCCCCcccccceecccC
Q 009507 402 TGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFV 480 (533)
Q Consensus 402 ~GHGvG~~l~vhE~P~~i~~~~-~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~ 480 (533)
||||||+||+|||+|.+|++++ .+..+|++|||+|+|||||.+|.|||||||+++|.+.++.++| ..||+||.||.+
T Consensus 475 TGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~fGIRienv~~vvd~~~~~~~--~~~L~fe~lT~v 552 (606)
T KOG2413|consen 475 TGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGIRIENVVEVVDAGTKHNF--RGFLTFEPLTLV 552 (606)
T ss_pred CCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCcceEEEeeEEEEEeccccccc--cceeeeccceec
Confidence 9999999999999999999874 3667899999999999999999999999999999998777777 679999999999
Q ss_pred CCCCCccchhcCCHHHHHHHHHHHHHHHHHHCCCCcH----HHHHHHHHccccc
Q 009507 481 PIQTKLVDLSLLSAAEIDWLNNYHSQVWEKVSPLLDG----FARQWLWNNTRPV 530 (533)
Q Consensus 481 P~~~~li~~~ll~~~e~~wln~yh~~v~~~~~~~l~~----~~~~wl~~~t~~~ 530 (533)
|+|++|||++|||++|++|||.||++|+++|+|+|++ .+++||.++|+||
T Consensus 553 P~q~klid~~LLs~eE~~~LN~Yh~~v~~~i~~~L~~~~~~~~~~WL~~~t~Pi 606 (606)
T KOG2413|consen 553 PYQTKLIDKSLLSEEEINWLNEYHAKVRSKIGPELQKEGRMEEYKWLINATQPI 606 (606)
T ss_pred ceecccCChhhCCHHHHHHHHHHHHHHHHhccHHHhhccchhHHHHHHhhccCC
Confidence 9999999999999999999999999999999999996 3899999999997
No 2
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-63 Score=520.18 Aligned_cols=361 Identities=30% Similarity=0.410 Sum_probs=297.5
Q ss_pred cccCcCHHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecC-ceEEEEeCCCCCHHHHhhh
Q 009507 69 KYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHL 147 (533)
Q Consensus 69 ~~~g~~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~-~~~Lfv~~~~~~~~~~~~l 147 (533)
.++...+..|+.+++..|++++.|++++++..|++||+|+... .+.. + ..++++.+ .++||++..... .+....
T Consensus 4 ~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~n~~yltg~~~~--~~~~-~-~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 78 (384)
T COG0006 4 RFADEEYRARLARLRELMEEAGLDALLLTSPSNFYYLTGFDAF--GFER-L-QALLVPAEGEPVLFVRGRDEE-AAKETS 78 (384)
T ss_pred ccchHHHHHHHHHHHHHHHHcCCcEEEecCCCceEEEeCCCCC--cccc-e-EEEEEcCCCceEEEEcchhHH-HHHhhc
Confidence 3455678899999999999999999999999999999999851 1211 1 23445544 588998754321 222222
Q ss_pred hc--CCeEEeeCc--------cHHHHHHHHHhCCCeEEEeCCC--chHHHHHHHHHHHhhhhhcccccccccccccCCCC
Q 009507 148 KN--AGVELRPYN--------SILSEIKSLAAQGAQLWLDPSS--VNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTG 215 (533)
Q Consensus 148 ~~--~~v~v~~y~--------~~~~~l~~l~~~~~~i~~d~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (533)
.. .++...... .+...+........++|++... .+...+..+...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~---------------------- 136 (384)
T COG0006 79 WIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAAL---------------------- 136 (384)
T ss_pred ccccCceEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhC----------------------
Confidence 11 122222111 1222333332235678998775 5666677776643
Q ss_pred CCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCC
Q 009507 216 QSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTS 295 (533)
Q Consensus 216 ~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~s 295 (533)
+..+++++.+++..+|+|||+.||+.||+|+.+++.|+.++++++ ++|+||.|++++++..+. ..|..++|
T Consensus 137 --~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~------~~g~tE~ev~a~l~~~~~-~~G~~~~s 207 (384)
T COG0006 137 --PRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAI------RPGMTEAEIAAELEYALR-KGGAEGPS 207 (384)
T ss_pred --CCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHH-HcCCCccC
Confidence 234689999999999999999999999999999999999999998 799999999999998765 45677789
Q ss_pred CCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q 009507 296 FDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFP 375 (533)
Q Consensus 296 f~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P 375 (533)
|++|+++|+|++++||.|++ +++++||+|+||+|++|.||+||+||||++|+|+++|+++|+.|++||.++++++||
T Consensus 208 f~~iv~~G~n~a~pH~~~~~---~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rp 284 (384)
T COG0006 208 FDTIVASGENAALPHYTPSD---RKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRP 284 (384)
T ss_pred cCcEEeccccccCcCCCCCc---ccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999987 889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchHHHHHHHHHHHcCC--CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEE
Q 009507 376 QSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIEN 453 (533)
Q Consensus 376 ~G~~~~~ld~~ar~~l~~~G~--~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd 453 (533)
|+++.++|.++|+++|+.|+ +|.|++|||||+++++||.|..++ +++..+|+||||||+|||+|.+|.+||||||
T Consensus 285 -G~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~--~~~~~~L~~GMv~t~Epg~y~~g~~GirIEd 361 (384)
T COG0006 285 -GVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLS--PGSDTTLEPGMVFSIEPGIYIPGGGGVRIED 361 (384)
T ss_pred -CCcHHHHHHHHHHHHHhcCCcccccCCccccCCCCcccCcCccccC--CCCCccccCCcEEEeccccccCCCceEEEEE
Confidence 99999999999999999665 799999999999999999996343 3478899999999999999999999999999
Q ss_pred eEEEeecCCCCCCCCcccccceecccCCCC
Q 009507 454 LLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 483 (533)
Q Consensus 454 ~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~ 483 (533)
+++||++ |+|.||..|.+
T Consensus 362 ~vlVte~------------G~e~LT~~~~~ 379 (384)
T COG0006 362 TVLVTED------------GFEVLTRVPKE 379 (384)
T ss_pred EEEEcCC------------CceecccCCcc
Confidence 9999998 99999966633
No 3
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=8.4e-62 Score=507.15 Aligned_cols=345 Identities=26% Similarity=0.348 Sum_probs=293.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhhhcCCeEEee
Q 009507 77 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVELRP 156 (533)
Q Consensus 77 ~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l~~~~v~v~~ 156 (533)
+|++++|+.|+++++|+++|++++|++|||||.|+. ++++|+.++..||+|. +...++.+.+....+.+.+
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~~~~n~~YLTGf~g~~--------g~llIt~~~~~l~td~-ry~~qa~~~~~~~~v~~~~ 72 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGS--------GYVVISRESAHILVDS-RYYADVEARAQGYQLHLLD 72 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEECCccccccccCccCCC--------eEEEEECCCCEEEcCc-chHHHHHhhCCCceEEEec
Confidence 589999999999999999999999999999999864 5788899888888886 4544554444322233332
Q ss_pred Cc-cHHHHHHHHHh--CCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchhh
Q 009507 157 YN-SILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSK 233 (533)
Q Consensus 157 y~-~~~~~l~~l~~--~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lr 233 (533)
+. .+.+.|.++.. +.++||+|...+++..+..|.+.+ +.++++. .+..+|
T Consensus 73 ~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~~l-------------------------~~~~~~~--~~~~lR 125 (361)
T PRK09795 73 ATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSEL-------------------------NAKLVSA--TPDVLR 125 (361)
T ss_pred CCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhc-------------------------Ccccccc--cHHHHh
Confidence 22 34455655543 236899999999999888887642 1233443 389999
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccC
Q 009507 234 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKP 313 (533)
Q Consensus 234 avK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p 313 (533)
+|||++||+.||+|+.+++.++..++..+ ++|+||.|+++.++... ...|....+|++|+++|+|++.||+.|
T Consensus 126 ~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i------~~G~tE~e~~~~~~~~~-~~~G~~~~~f~~iv~sG~~~~~ph~~~ 198 (361)
T PRK09795 126 QIKTPEEVEKIRLACGIADRGAEHIRRFI------QAGMSEREIAAELEWFM-RQQGAEKASFDTIVASGWRGALPHGKA 198 (361)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHH-HHCCCCcCCCCeEEEEeccccccCCCC
Confidence 99999999999999999999998887776 89999999999998754 456888899999999999999999999
Q ss_pred CCCCCcccCCCCeEEEEeceeecCcccceeecCcCCC--CCHH---HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHH
Q 009507 314 EPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGE--PTAR---EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 388 (533)
Q Consensus 314 ~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~--p~~e---~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar 388 (533)
++ ++|++||++++|+|+.|+||++|+||||++|. ++++ ++++|+.+++++.+++++++| |+++++|+.+++
T Consensus 199 ~~---~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rp-G~~~~~v~~~~~ 274 (361)
T PRK09795 199 SD---KIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRP-GVRCQQVDDAAR 274 (361)
T ss_pred CC---ceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHH
Confidence 76 99999999999999999999999999999963 3333 789999999999999999999 999999999999
Q ss_pred HHHHHcCC--CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCCCCCC
Q 009507 389 SSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRF 466 (533)
Q Consensus 389 ~~l~~~G~--~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~~~~~ 466 (533)
+++++.|+ .|.|++||||| |++||.|. ++. +++.+|++||||++|||+|.+|.+|+||||+|+||++
T Consensus 275 ~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~~--~~~~~l~~gmv~~iEpgiy~~~~~gvriEd~v~vt~~------ 343 (361)
T PRK09795 275 RVITEAGYGDYFGHNTGHAIG--IEVHEDPR-FSP--RDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQ------ 343 (361)
T ss_pred HHHHHcCCCccCCCCCCccCC--ccccCCCC-cCC--CCCCCcCCCCEEEECCEEEeCCCCEEEEeeEEEECCC------
Confidence 99999999 47999999999 99999997 653 3778999999999999999999999999999999998
Q ss_pred CCcccccceecccCCCCCCcc
Q 009507 467 GGVSYLGFEKLTFVPIQTKLV 487 (533)
Q Consensus 467 ~~~~~lg~e~LT~~P~~~~li 487 (533)
|+|.||..| ++|+
T Consensus 344 ------G~e~Lt~~~--~~l~ 356 (361)
T PRK09795 344 ------GAEVLYAMP--KTVL 356 (361)
T ss_pred ------CcEeCcCCC--ceEE
Confidence 999999999 5554
No 4
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=1.7e-59 Score=493.88 Aligned_cols=359 Identities=17% Similarity=0.202 Sum_probs=291.7
Q ss_pred cccCcCHHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEec-CceEEEEeCCCCCHHHHh--
Q 009507 69 KYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEM-DRAKLFVDDSKVTPDVMD-- 145 (533)
Q Consensus 69 ~~~g~~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~-~~~~Lfv~~~~~~~~~~~-- 145 (533)
.|+..++++|++|+|+.|+++++|++|+++++||+||||+.+.. ..+ ..+++|+. ++++|+++..... .++.
T Consensus 5 ~f~~~E~~~Rl~rl~~~m~~~~lDalli~~~~ni~YltG~~~~~-~~~---~~~l~v~~~~~~~l~~~~~~~~-~~~~~~ 79 (391)
T TIGR02993 5 FFTRAEYQARLDKTRAAMEARGIDLLIVTDPSNMAWLTGYDGWS-FYV---HQCVLLPPEGEPIWYGRGQDAN-GAKRTA 79 (391)
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEEcCcccceeeccCCCCc-eEE---EEEEEEcCCCceEEEehhhhhh-hHhhee
Confidence 46778899999999999999999999999999999999998642 112 24577774 4677777532111 1111
Q ss_pred hhhcCCeEEeeCc---------c----HHHHHHHHHhCCCeEEEeCCC--chHHHHHHHHHHHhhhhhcccccccccccc
Q 009507 146 HLKNAGVELRPYN---------S----ILSEIKSLAAQGAQLWLDPSS--VNAAIMNTYEIAIEKYLTSNNNKKSKTKMH 210 (533)
Q Consensus 146 ~l~~~~v~v~~y~---------~----~~~~l~~l~~~~~~i~~d~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 210 (533)
++.. ..+..|. + +.+.|++.....++||+|.+. ++...++.|.+.+
T Consensus 80 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l----------------- 140 (391)
T TIGR02993 80 FMDH--DNIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHL----------------- 140 (391)
T ss_pred eccc--cceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhC-----------------
Confidence 1110 1222221 2 233333332234589999874 7888898887653
Q ss_pred cCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHh---
Q 009507 211 TDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK--- 287 (533)
Q Consensus 211 ~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~--- 287 (533)
|+++++|++.++..+|+|||++||+.||+|+++++.++.++.+.+ ++|+||.|+++.+......
T Consensus 141 -------~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i------~pG~tE~ei~~~~~~~~~~~~~ 207 (391)
T TIGR02993 141 -------PNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERI------EPGMRKCDLVADIYDAGIRGVD 207 (391)
T ss_pred -------CCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHhhhhccc
Confidence 467789999999999999999999999999999999999888777 8999999999998653222
Q ss_pred hCCCCCCCCCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHH
Q 009507 288 QSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHI 367 (533)
Q Consensus 288 ~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~ 367 (533)
..|...++|.+|+++|+|++++|+.|++ ++|++||++++|+|+.|+||++|+|||+++|+|+++++++|+.+++++.
T Consensus 208 ~~g~~~~~~~~iv~sG~~~a~pH~~~~~---~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~ 284 (391)
T TIGR02993 208 GFGGDYPAIVPLLPSGADASAPHLTWDD---SPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGME 284 (391)
T ss_pred CcCCCcCCcccccccCccccCCCCCCCC---CcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 1233456788899999999999999876 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCccccccccCCccccCC----CCCCCcCCCCccccCCCEEecCcceee
Q 009507 368 ALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGP----QSISFRYGNMTPLVEGMIVSNEPGYYE 443 (533)
Q Consensus 368 ~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~~GHGvG~~l~vhE~P----~~i~~~~~~~~~L~~GMv~siEPg~y~ 443 (533)
+++++++| |+++++|+.++++.+.+.|+...|++||||| +++|+.+ ..++ ++++.+|++||||++|||+|.
T Consensus 285 ~~i~~ikp-G~~~~dv~~~~~~~~~~~G~~~~h~~GhgiG--l~~~~~~~e~~~~l~--~~~~~~L~~GMv~tvEpgiy~ 359 (391)
T TIGR02993 285 AGLEAAKP-GNTCEDIANAFFAVLKKYGIHKDSRTGYPIG--LSYPPDWGERTMSLR--PGDNTVLKPGMTFHFMTGLWM 359 (391)
T ss_pred HHHHHcCC-CCcHHHHHHHHHHHHHHcCCccCCCceeeec--cCcCCCCCCcccccc--CCCCceecCCCEEEEcceeEe
Confidence 99999999 9999999999999999999987899999999 8887532 1244 347789999999999999999
Q ss_pred cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCCCCCcc
Q 009507 444 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLV 487 (533)
Q Consensus 444 ~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~li 487 (533)
+| +|+||||+|+||++ |+|.||..| ++|+
T Consensus 360 ~~-~Gvried~v~VT~~------------G~e~Lt~~p--~~l~ 388 (391)
T TIGR02993 360 ED-WGLEITESILITET------------GVECLSSVP--RKLF 388 (391)
T ss_pred CC-CCeEEeeEEEECCC------------cceecccCC--cccE
Confidence 97 59999999999998 999999999 5544
No 5
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=4.7e-57 Score=477.15 Aligned_cols=356 Identities=17% Similarity=0.178 Sum_probs=289.0
Q ss_pred HHHHHHHHHHHcCCCEEEEccCCccccccCcccCCC-CCCcceeEEEEEecC-c-eE-EEEeCCCCCHHHHhh-h--hcC
Q 009507 78 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDV-PHSPVMYAYLIVEMD-R-AK-LFVDDSKVTPDVMDH-L--KNA 150 (533)
Q Consensus 78 Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di-~~~Pv~~s~liv~~~-~-~~-Lfv~~~~~~~~~~~~-l--~~~ 150 (533)
-++|+|+.|+++|+|++||++++|++||||+.+..+ .+.|...+.++|+.+ + +. ++++..... .++.. . ...
T Consensus 12 ~~~rlr~~m~~~glD~lvl~~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~~-~~~~~~~~~~~~ 90 (406)
T PRK14575 12 VSRKLRTIMERDNIDAVIVTTCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEAA-SLTLDMPNAELK 90 (406)
T ss_pred HHHHHHHHHHHcCCCEEeecCcchheeecccccccceecccCCceEEEEEcCCCCCceEEechhhhh-hhcccccccccc
Confidence 468999999999999999999999999999987532 345555566788876 3 55 555432221 11110 0 000
Q ss_pred Ce-EEe----eC------------------c----cHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhccccc
Q 009507 151 GV-ELR----PY------------------N----SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNK 203 (533)
Q Consensus 151 ~v-~v~----~y------------------~----~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~ 203 (533)
.+ .+. || + .+.+.|++....+++||+|.+..+...+..|...+
T Consensus 91 ~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~l---------- 160 (406)
T PRK14575 91 TFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDAVM---------- 160 (406)
T ss_pred cCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHHHHhC----------
Confidence 11 111 23 1 11233433322467999999988999998887643
Q ss_pred ccccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHH
Q 009507 204 KSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLE 283 (533)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~ 283 (533)
|+++++|++..+..+|+|||+.||+.||+|+++++.++.++++.+ ++|+||.|+++.+..
T Consensus 161 --------------p~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~pG~tE~elaa~~~~ 220 (406)
T PRK14575 161 --------------PNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLI------RVGCTSAELTAAYKA 220 (406)
T ss_pred --------------CCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHH
Confidence 467889999999999999999999999999999999999888776 899999999999976
Q ss_pred HHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHH
Q 009507 284 FRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVL 363 (533)
Q Consensus 284 ~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl 363 (533)
.... .|....++.+++++|++ +.+|+.|++ +++++||++++|+|+.|+||++|+||||++|+|+++|+++|+.++
T Consensus 221 ~~~~-~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~ 295 (406)
T PRK14575 221 AVMS-KSETHFSRFHLISVGAD-FSPKLIPSN---TKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIR 295 (406)
T ss_pred HHHH-cCCCcCCcCceEEECCC-cccCCCCCC---CcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHH
Confidence 5433 34333444478889988 568998865 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcce
Q 009507 364 QGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGY 441 (533)
Q Consensus 364 ~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~--~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~ 441 (533)
+++.+++++++| |+++++|+.++++.+++.|+. +.|++|||+|+++++||.|. +.. +++.+|++||||++|||+
T Consensus 296 ~a~~~~~~~~rp-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~-i~~--~~~~~Le~GMv~tiEpgi 371 (406)
T PRK14575 296 TGHEHMLSMVAP-GVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPF-VST--HATESFTSGMVLSLETPY 371 (406)
T ss_pred HHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCC-CCC--CCCCCcCCCCEEEECCee
Confidence 999999999999 999999999999999999993 57999999998789999997 543 367899999999999999
Q ss_pred eecCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCCCCCcc
Q 009507 442 YEDHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLV 487 (533)
Q Consensus 442 y~~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~li 487 (533)
|.+|.+|+|+||+|+||++ |+|.||..| ++|+
T Consensus 372 y~~g~gGvriEDtvlVT~~------------G~e~LT~~p--~~l~ 403 (406)
T PRK14575 372 YGYNLGSIMIEDMILINKE------------GIEFLSKLP--RDLV 403 (406)
T ss_pred ecCCCcEEEEEeEEEEcCC------------CcccCCCCC--cccc
Confidence 9999999999999999999 999999999 5554
No 6
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=1.9e-55 Score=464.68 Aligned_cols=355 Identities=17% Similarity=0.177 Sum_probs=285.6
Q ss_pred HHHHHHHHHHcCCCEEEEccCCccccccCcccCCC-CCCcceeEEEEEecC--ce-EEEEeCCCCCHHHH-----hhhhc
Q 009507 79 LSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDV-PHSPVMYAYLIVEMD--RA-KLFVDDSKVTPDVM-----DHLKN 149 (533)
Q Consensus 79 i~~lr~~m~~~g~dallls~~d~IawL~n~rg~di-~~~Pv~~s~liv~~~--~~-~Lfv~~~~~~~~~~-----~~l~~ 149 (533)
-+|+|+.|+++|+|++||++++||+||||+....+ ...+..+.+++++.+ ++ .++++..... .++ ..+..
T Consensus 13 ~~r~r~~M~~~gldalll~~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~~-~~~~~~~~~~~~~ 91 (405)
T PRK14576 13 SRKARVVMEREGIDALVVTVCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEAA-STHFDMPNSVLKT 91 (405)
T ss_pred HHHHHHHHHHcCCCEEEeccccceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhhh-hhhcccccccccc
Confidence 46899999999999999999999999999986532 223444456666645 24 4555432111 111 01110
Q ss_pred CCe--E-EeeC---------------------ccHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhccccccc
Q 009507 150 AGV--E-LRPY---------------------NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKS 205 (533)
Q Consensus 150 ~~v--~-v~~y---------------------~~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 205 (533)
..+ . -.|+ +.+.+.|+++...+++||+|.+.++...+..|...+
T Consensus 92 ~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~~------------ 159 (405)
T PRK14576 92 FPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDKVA------------ 159 (405)
T ss_pred CCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHhhC------------
Confidence 000 0 0111 112233444433567999999888888887776532
Q ss_pred ccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHH
Q 009507 206 KTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFR 285 (533)
Q Consensus 206 ~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r 285 (533)
|+.+++|++..+..+|+|||+.||+.||+|+.+++.++.++++.+ ++|+||.|+++.++...
T Consensus 160 ------------~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i------~pG~tE~elaa~~~~~~ 221 (405)
T PRK14576 160 ------------PGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKI------RVGCTAAELTAAFKAAV 221 (405)
T ss_pred ------------CCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999888777 89999999999998754
Q ss_pred HhhCCCCCCCCCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHH
Q 009507 286 SKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQG 365 (533)
Q Consensus 286 ~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~ 365 (533)
.. .|....++.+++++|+| +.+|+.|++ +++++||++++|+|+.|.||++|+||||++|+|+++++++|+.++++
T Consensus 222 ~~-~g~~~~~~~~~v~~G~~-~~~h~~~~~---~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a 296 (405)
T PRK14576 222 MS-FPETNFSRFNLISVGDN-FSPKIIADT---TPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTG 296 (405)
T ss_pred HH-cCCCcCCCCCEEEECCc-ccCCCCCCC---cccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHH
Confidence 43 34333444489999999 568998876 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCCCCcchHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceee
Q 009507 366 HIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYE 443 (533)
Q Consensus 366 ~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~--~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~ 443 (533)
+.+++++++| |+++++|+.++++.+.+.|+. +.|++|||+|.++++||.|. ++. +++.+|++||||++||++|.
T Consensus 297 ~~a~~~~~rP-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~-i~~--~~~~~Le~GMv~~vEp~~y~ 372 (405)
T PRK14576 297 HEHMLSMVAP-GVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEVPF-VST--QATETFCPGMVLSLETPYYG 372 (405)
T ss_pred HHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcCCC-cCC--CCCCccCCCCEEEECCceee
Confidence 9999999999 999999999999999999983 56899999998889999997 643 36789999999999999999
Q ss_pred cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCCCCCcc
Q 009507 444 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLV 487 (533)
Q Consensus 444 ~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~li 487 (533)
+|.+|+|+||+|+||++ |+|.||..| ++|+
T Consensus 373 ~g~ggvriEDtvlVTe~------------G~e~LT~~p--~~l~ 402 (405)
T PRK14576 373 IGVGSIMLEDMILITDS------------GFEFLSKLD--RDLR 402 (405)
T ss_pred cCCCEEEEeeEEEECCC------------ccccCCCCC--cccc
Confidence 99999999999999998 999999999 4443
No 7
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=4.3e-51 Score=434.84 Aligned_cols=357 Identities=21% Similarity=0.259 Sum_probs=275.6
Q ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEccC----------------CccccccCcccCCCCCCcceeEEEEEec-C----ce
Q 009507 72 GLDVASKLSSLRSDLVDAGSSAIVISML----------------DEIAWLLNLRGSDVPHSPVMYAYLIVEM-D----RA 130 (533)
Q Consensus 72 g~~~~~Ki~~lr~~m~~~g~dallls~~----------------d~IawL~n~rg~di~~~Pv~~s~liv~~-~----~~ 130 (533)
..++..|++++.+.|.+.. ++||.+- .|+.||||+.-.+ +++++.+ + ..
T Consensus 3 ~~~~~~rR~~l~~~~~~~~--~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~--------~~lv~~~~~~~~~~~ 72 (438)
T PRK10879 3 QQEFQRRRQALLAKMQPGS--AALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPE--------AVLVLIKSDDTHNHS 72 (438)
T ss_pred hHHHHHHHHHHHhhCCCCc--EEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCC--------eEEEEecCCCCCCeE
Confidence 3568899999999997532 4454432 3578899876333 5566532 2 36
Q ss_pred EEEEeCCCCCHHH--------HhhhhcCCe-EEeeCccHHHHHHHHHhCCCeEEEeCCCch---HH---HHHHHHHHHhh
Q 009507 131 KLFVDDSKVTPDV--------MDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVN---AA---IMNTYEIAIEK 195 (533)
Q Consensus 131 ~Lfv~~~~~~~~~--------~~~l~~~~v-~v~~y~~~~~~l~~l~~~~~~i~~d~~~~~---~~---~~~~l~~~~~~ 195 (533)
+||+++.....++ .+.....++ ++.+++++.+.|.++......+..+....+ .. .++.+.....
T Consensus 73 ~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (438)
T PRK10879 73 VLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRKGSR- 151 (438)
T ss_pred EEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhcCCceEEecCCccccchhHHHHHHHHHHhhhc-
Confidence 8999653221111 111112456 588999999999887654445555543221 11 2222221100
Q ss_pred hhhcccccccccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHH
Q 009507 196 YLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEV 275 (533)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~ 275 (533)
....+..+++|+...+..+|+|||++||+.||+|+.+++.|+.++++.+ ++|+||.
T Consensus 152 ------------------~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~------~pG~tE~ 207 (438)
T PRK10879 152 ------------------QNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKC------RPGMFEY 207 (438)
T ss_pred ------------------cccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCcHH
Confidence 0112345678888999999999999999999999999999999988776 8999999
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcC-CCCCHH
Q 009507 276 DVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAR 354 (533)
Q Consensus 276 eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~-G~p~~e 354 (533)
|+++.++... ...|....+|++|+++|+|++++||.|++ ++|++||+|++|+|+.|+||++|+||||++ |+++++
T Consensus 208 ei~a~~~~~~-~~~G~~~~~~~~iv~~G~na~~~H~~~~~---~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~ 283 (438)
T PRK10879 208 QLEGEIHHEF-NRHGARYPSYNTIVGSGENGCILHYTENE---SEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPA 283 (438)
T ss_pred HHHHHHHHHH-HHCCCCCCCCCcEEEEcCccccccCCCCc---cccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHH
Confidence 9999987653 34677778999999999999999999876 899999999999999999999999999998 899999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHH----Hc--------------CC--CCcCccccccccCCcccc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLW----KI--------------GL--DYRHGTGHGVGAALNVHE 414 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~----~~--------------G~--~~~h~~GHGvG~~l~vhE 414 (533)
|+++|++|++++.+++++++| |+++++|+.++++.+. +. |+ .|.|++||+|| |++||
T Consensus 284 q~~~y~~vl~a~~aai~~~kp-G~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iG--ldvHd 360 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRP-GTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLG--LDVHD 360 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccC--cCcCc
Confidence 999999999999999999999 9999999999886543 33 33 57999999999 99999
Q ss_pred CCCCCCCcCCCCccccCCCEEecCcceeecC---------cceEEEEEeEEEeecCCCCCCCCcccccceeccc-CCCCC
Q 009507 415 GPQSISFRYGNMTPLVEGMIVSNEPGYYEDH---------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQT 484 (533)
Q Consensus 415 ~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g---------~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~-~P~~~ 484 (533)
.|. +. .+++.+|+||||||+|||+|.+. .+||||||+|+||++ |+|.||. +|.+.
T Consensus 361 ~~~-~~--~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~~------------G~e~LT~~~pk~~ 425 (438)
T PRK10879 361 VGV-YG--QDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITET------------GNENLTASVVKKP 425 (438)
T ss_pred CCC-cC--CCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECCC------------cCeEcCccCCCCH
Confidence 886 43 23567899999999999999863 269999999999998 9999995 89554
Q ss_pred C
Q 009507 485 K 485 (533)
Q Consensus 485 ~ 485 (533)
+
T Consensus 426 ~ 426 (438)
T PRK10879 426 D 426 (438)
T ss_pred H
Confidence 3
No 8
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=3.2e-51 Score=419.92 Aligned_cols=279 Identities=20% Similarity=0.207 Sum_probs=241.1
Q ss_pred eCccHHHHHHH----HHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccch
Q 009507 156 PYNSILSEIKS----LAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAF 231 (533)
Q Consensus 156 ~y~~~~~~l~~----l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~ 231 (533)
+.+.+.+.|+. +....++||+|.+.+++..+..|++.+ |+++++|+++++..
T Consensus 36 ~~~~~~~~l~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~l------------------------~~~~~~d~~~~i~~ 91 (323)
T PRK15173 36 PIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDAVM------------------------PNVDFVDSSSIFNE 91 (323)
T ss_pred cHHHHHHHHHHHHHHcCccCCEEEEecCccCHHHHHHHHhhC------------------------CCCeEEEhHHHHHH
Confidence 34444444444 433567999999988999998888743 46778999999999
Q ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccc
Q 009507 232 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHY 311 (533)
Q Consensus 232 lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy 311 (533)
+|+||||+||+.||+|+++++.++.++++.+ ++|+||.|+++.++..... .|....++.+++++|+++ .+|+
T Consensus 92 lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i------~~G~tE~el~a~~~~~~~~-~g~~~~~~~~~i~~G~~~-~~h~ 163 (323)
T PRK15173 92 LRVIKSPWEIKRLRKSAEITEYGITEASKLI------RVGCTSAELTAAYKAAVMS-KSETHFSRFHLISVGADF-SPKL 163 (323)
T ss_pred HHccCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCCCCCCCcEEEECCCC-ccCC
Confidence 9999999999999999999999999887766 8999999999999765443 343333444677889874 5788
Q ss_pred cCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHH
Q 009507 312 KPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSL 391 (533)
Q Consensus 312 ~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l 391 (533)
.|++ +++++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++|+.++++++
T Consensus 164 ~~~~---~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irP-G~~~~dv~~a~~~~~ 239 (323)
T PRK15173 164 IPSN---TKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAP-GVKMKDVFDSTMEVI 239 (323)
T ss_pred CCCC---CccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHH
Confidence 8765 899999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHcCCC--CcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCCCCCCCCc
Q 009507 392 WKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGV 469 (533)
Q Consensus 392 ~~~G~~--~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~~~~~~~~ 469 (533)
++.|+. +.|++|||||+++++||.|. +.. +++.+|++|||||+|||+|.++.+|+|+||+|+||++
T Consensus 240 ~~~G~~~~~~~~~GHGiG~~lg~~E~P~-i~~--~~~~~Le~GMV~tiEPgiy~~g~ggvriEDtvlVTe~--------- 307 (323)
T PRK15173 240 KKSGLPNYNRGHLGHGNGVFLGLEESPF-VST--HATESFTSGMVLSLETPYYGYNLGSIMIEDMILINKE--------- 307 (323)
T ss_pred HHcCCccccCCCCCCcCCCCCCcCCCCC-CCC--CCCCccCCCCEEEECCEEEcCCCcEEEEeeEEEEcCC---------
Confidence 999983 56899999998889999998 443 3678899999999999999999999999999999999
Q ss_pred ccccceecccCCCCCCcc
Q 009507 470 SYLGFEKLTFVPIQTKLV 487 (533)
Q Consensus 470 ~~lg~e~LT~~P~~~~li 487 (533)
|+|.||..| ++|+
T Consensus 308 ---G~e~LT~~p--~~l~ 320 (323)
T PRK15173 308 ---GIEFLSKLP--RDLV 320 (323)
T ss_pred ---cceeCCCCC--ccce
Confidence 999999999 5444
No 9
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=1.3e-45 Score=392.10 Aligned_cols=232 Identities=25% Similarity=0.284 Sum_probs=198.5
Q ss_pred ccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEE
Q 009507 222 GVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISG 301 (533)
Q Consensus 222 ~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~ 301 (533)
..+....+..+|+|||+.||+.||+|+.+++.++.++++.+ ++|+||.|+++.+... ...+....+|++|++
T Consensus 148 ~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~tE~ei~~~~~~~--~~~~~~~~~y~~iva 219 (443)
T PRK13607 148 PKGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAF------RAGMSEFDINLAYLTA--TGQRDNDVPYGNIVA 219 (443)
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHh------hcCCCHHHHHHHHHHH--hCCCCcCCCCCcEEE
Confidence 34456678899999999999999999999999999888766 8999999999876532 234455689999999
Q ss_pred ecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcc
Q 009507 302 SGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGF 381 (533)
Q Consensus 302 ~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~ 381 (533)
+|+|++++||.|++ .+.+++||++++|+|+.|+||++|+||||+ |+++++++++|++|++++.+++++++| |+++.
T Consensus 220 ~G~naa~~H~~~~~--~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikP-G~~~~ 295 (443)
T PRK13607 220 LNEHAAVLHYTKLD--HQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKP-GVSYV 295 (443)
T ss_pred ecCcceEecCCccC--CCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccC-CCCHH
Confidence 99999999999875 246899999999999999999999999999 889999999999999999999999999 99999
Q ss_pred hHHHHHHHHHH----Hc--------------CC---CCcCccccccccCCccccCCCCCC-------------CcCCCCc
Q 009507 382 VLDAFARSSLW----KI--------------GL---DYRHGTGHGVGAALNVHEGPQSIS-------------FRYGNMT 427 (533)
Q Consensus 382 ~ld~~ar~~l~----~~--------------G~---~~~h~~GHGvG~~l~vhE~P~~i~-------------~~~~~~~ 427 (533)
+|+.+|++.+. +. |+ .|+|++||||| |++||.+.... +......
T Consensus 296 dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iG--ldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~ 373 (443)
T PRK13607 296 DLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLG--LQVHDVAGFMQDDRGTHLAAPEKHPYLRCTR 373 (443)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccC--cccccCCCcccccccccccccccccccccCC
Confidence 99999987664 22 33 47999999999 99999753100 0001457
Q ss_pred cccCCCEEecCcceeecC-------------------------cceEEEEEeEEEeecCCCCCCCCcccccceeccc
Q 009507 428 PLVEGMIVSNEPGYYEDH-------------------------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 479 (533)
Q Consensus 428 ~L~~GMv~siEPg~y~~g-------------------------~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~ 479 (533)
+|+||||||+|||+|.++ .+||||||+|+||++ |+|+||.
T Consensus 374 ~L~~GmV~TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~------------G~e~Lt~ 438 (443)
T PRK13607 374 VLEPGMVLTIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHEN------------GVENMTR 438 (443)
T ss_pred cCCCCcEEEECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCC------------CCeECCh
Confidence 899999999999999974 679999999999999 9999995
No 10
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.7e-45 Score=364.91 Aligned_cols=221 Identities=18% Similarity=0.181 Sum_probs=199.7
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCCeEEEecCCccc
Q 009507 234 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANGAI 308 (533)
Q Consensus 234 avK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~-----~~sf~~i~~~G~n~a~ 308 (533)
.||||+||+.||+|+++++.++..+++.+ ++|+||.|+++.++.... ..|.. ..+|++++++|+|++.
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~------~~G~tE~el~~~~~~~~~-~~G~~~~~~~~~~~~~~i~~g~n~~~ 75 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIM------KPGITTKEINTFVEAYLE-KHGATSEQKGYNGYPYAICASVNDEM 75 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCcHHHHHHHHHHHHH-HcCCcccccccCCCCcceEeccCCEe
Confidence 69999999999999999999999887766 899999999999987643 45544 2478888999999999
Q ss_pred ccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHH
Q 009507 309 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 388 (533)
Q Consensus 309 ~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar 388 (533)
+||.|++ ++|++||+|++|+|++|.||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++++.+++
T Consensus 76 ~H~~p~~---~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kp-G~~~~dv~~a~~ 151 (248)
T PRK12897 76 CHAFPAD---VPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVI-GNRVGDIGYAIE 151 (248)
T ss_pred ecCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCccchHHHHHH
Confidence 9999976 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CcCccccccccCCccccCCCCCCC-cCCCCccccCCCEEecCccee-----------------ecCcceE
Q 009507 389 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYY-----------------EDHAFGI 449 (533)
Q Consensus 389 ~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~-~~~~~~~L~~GMv~siEPg~y-----------------~~g~~Gi 449 (533)
+++.+.|+. +.|++||||| +++||.|..... .+++..+|+|||||++|||+| .+|.+|+
T Consensus 152 ~~~~~~g~~~~~~~~GHgiG--l~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~ 229 (248)
T PRK12897 152 SYVANEGFSVARDFTGHGIG--KEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSA 229 (248)
T ss_pred HHHHHcCCccCCCeEECccC--CcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEe
Confidence 999999995 6899999999 999999984322 223567899999999999999 3677899
Q ss_pred EEEEeEEEeecCCCCCCCCcccccceeccc
Q 009507 450 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 479 (533)
Q Consensus 450 riEd~v~Vt~~~~~~~~~~~~~lg~e~LT~ 479 (533)
|+||+|+||++ |+|.||.
T Consensus 230 r~edtv~Vt~~------------G~e~lt~ 247 (248)
T PRK12897 230 QYEHTIAITKD------------GPIILTK 247 (248)
T ss_pred ecceEEEEeCC------------ccEEeec
Confidence 99999999998 9999985
No 11
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=2.8e-45 Score=357.10 Aligned_cols=217 Identities=59% Similarity=0.965 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCC--cCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcc
Q 009507 243 GMLNSHLRDAAALAQFWVWLEEEIHNGAK--LTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 320 (533)
Q Consensus 243 ~~r~A~~~~~~a~~~~~~~l~~~i~~~~g--~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~ 320 (533)
+||.|+.+++.++.+.+.++.+.+ ++| +||.||++.+++++....++.+.+|++++++|+|++++||.|++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i--~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p~~~~~r~ 78 (224)
T cd01085 1 GMRAAHIRDGVALVEFLAWLEQEV--PKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSPTEESNRK 78 (224)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHh--ccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCcCcccCcc
Confidence 479999999999999999998888 899 9999999999987655555666789999999999999999998434599
Q ss_pred cCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcC
Q 009507 321 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRH 400 (533)
Q Consensus 321 i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h 400 (533)
|++||+|++|+|+.|+||++|+||||++|+|+++|+++|+.++++++++++.+++.|+++.+++.++++.+.+.|++|.|
T Consensus 79 l~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~h 158 (224)
T cd01085 79 ISPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYGH 158 (224)
T ss_pred cCCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999888633999999999999999999999999
Q ss_pred ccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCC
Q 009507 401 GTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGT 462 (533)
Q Consensus 401 ~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~ 462 (533)
++|||||.+|++||.|..+ ..++++.+|++|||||+||++|.+|.+|+|+||+|+||+++.
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~g~~gvried~v~Vt~~G~ 219 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKEGKYGIRIENLVLVVEAET 219 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeCCCeEEEeeEEEEEeeCCc
Confidence 9999999777899999844 123467899999999999999999999999999999999854
No 12
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=5.4e-45 Score=365.93 Aligned_cols=228 Identities=18% Similarity=0.157 Sum_probs=201.4
Q ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCC-------CC--CCCCCeEEEe
Q 009507 232 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSG-------FL--DTSFDTISGS 302 (533)
Q Consensus 232 lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g-------~~--~~sf~~i~~~ 302 (533)
|..+||++||+.||+|+++...++.++.+.+ ++|+||.|+++.++....+ .| +. ..+|++++++
T Consensus 1 m~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i------~pG~te~ei~~~~~~~~~~-~g~~~~~~G~~~~~~~f~~~v~~ 73 (286)
T PRK07281 1 MITLKSAREIEAMDRAGDFLASIHIGLRDLI------KPGVDMWEVEEYVRRRCKE-ENVLPLQIGVDGAMMDYPYATCC 73 (286)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHC------cCCCcHHHHHHHHHHHHHH-cCCcccccCCCCcccCCCcceEE
Confidence 3479999999999999999999988776666 8999999999999875432 32 22 2689999999
Q ss_pred cCCcccccccCCCCCCcccCCCCeEEEEece---------------------------eecCcccceeecCcCCCCCHHH
Q 009507 303 GANGAIIHYKPEPGKCSVVDSKKLFLLDSGA---------------------------QYVDGTTDITRTVHFGEPTARE 355 (533)
Q Consensus 303 G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~---------------------------~y~gy~tDitRT~~~G~p~~e~ 355 (533)
|.|++++|+.|++ ++|++||+|++|+|+ .|+||++|+||||++|+|++++
T Consensus 74 G~n~~~~H~~p~~---~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~ 150 (286)
T PRK07281 74 GLNDEVAHAFPRH---YILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEV 150 (286)
T ss_pred eccccccCCCCCC---cCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHH
Confidence 9999999999976 999999999999997 4899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCCCCC-cCCCCccccCCC
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGM 433 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~-~~~~~~~L~~GM 433 (533)
+++|+.+++++.+++++++| |+++++|+.++++.+.+.|+. +.|++||||| +++||.|..... .++++.+|+|||
T Consensus 151 ~~l~~~~~ea~~~ai~~~kp-G~~~~di~~a~~~~~~~~G~~~~~~~~GHGIG--l~~hE~P~i~~~~~~~~~~~Le~GM 227 (286)
T PRK07281 151 KNLMDVTKEAMYRGIEQAVV-GNRIGDIGAAIQEYAESRGYGVVRDLVGHGVG--PTMHEEPMVPNYGTAGRGLRLREGM 227 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccCCCeeeeeCC--CccCCCCcCCCcccCCCCCEECCCC
Confidence 99999999999999999999 999999999999999999985 6799999999 999999973222 134678899999
Q ss_pred EEecCcceee------------------cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCCCC
Q 009507 434 IVSNEPGYYE------------------DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQT 484 (533)
Q Consensus 434 v~siEPg~y~------------------~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~ 484 (533)
||++||++|. +|.+|+|+||+|+||++ |+|.||..+.++
T Consensus 228 V~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~------------G~e~LT~~~~~~ 284 (286)
T PRK07281 228 VLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKD------------GPVILTSQGEER 284 (286)
T ss_pred EEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeCC------------cceECCCCCccc
Confidence 9999999986 45678999999999998 999999877554
No 13
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2e-44 Score=363.78 Aligned_cols=229 Identities=21% Similarity=0.246 Sum_probs=201.4
Q ss_pred ccchhhc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCC-------CCCCCCeE
Q 009507 228 PIAFSKA-VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF-------LDTSFDTI 299 (533)
Q Consensus 228 ~i~~lra-vK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~-------~~~sf~~i 299 (533)
.+..++. |||+.||+.||+|+++++.++.++++.+ ++|+||.|+++.++++.. ..|. .+.+|+++
T Consensus 35 ~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~i------rpG~tE~Eiaa~~~~~~~-~~G~~~~~~~~~~~~f~~~ 107 (291)
T PRK12318 35 YASQYDIIIKTPEQIEKIRKACQVTARILDALCEAA------KEGVTTNELDELSRELHK-EYNAIPAPLNYGSPPFPKT 107 (291)
T ss_pred ccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHH-HcCCCccccccCCCCCCcc
Confidence 3445565 9999999999999999999999887776 899999999988776533 3342 23579999
Q ss_pred EEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCC
Q 009507 300 SGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTP 379 (533)
Q Consensus 300 ~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~ 379 (533)
+++|.|++++|+.|++ ++|++||+|++|+|+.|.||++|+||||++|+|+++++++|+.+++++.+++++++| |++
T Consensus 108 v~~g~n~~~~H~~p~~---~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~ 183 (291)
T PRK12318 108 ICTSLNEVICHGIPND---IPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKP-GIP 183 (291)
T ss_pred eEeeccceeecCCCCC---CccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCC
Confidence 9999999999999976 999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cchHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCc---------ceE
Q 009507 380 GFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHA---------FGI 449 (533)
Q Consensus 380 ~~~ld~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~---------~Gi 449 (533)
+++|+.++++++++.|+. +.|.+||||| |++||.|......++++.+|++||||++||++|.++. ||+
T Consensus 184 ~~dv~~a~~~~~~~~G~~~~~~~~GHgIG--l~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~ 261 (291)
T PRK12318 184 LYEIGEVIENCADKYGFSVVDQFVGHGVG--IKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEA 261 (291)
T ss_pred HHHHHHHHHHHHHHcCCccCCCcccCCcC--ccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEE
Confidence 999999999999999995 5789999999 9999999843433345678999999999999998743 334
Q ss_pred E---------EEEeEEEeecCCCCCCCCcccccceecccCC
Q 009507 450 R---------IENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 481 (533)
Q Consensus 450 r---------iEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P 481 (533)
| +||+|+||++ |+|.||..|
T Consensus 262 ~~~~g~~~~~~edtv~VTe~------------G~e~LT~~~ 290 (291)
T PRK12318 262 RTCDNQPSAQWEHTILITET------------GYEILTLLD 290 (291)
T ss_pred EecCCCeeeeeeeEEEEcCC------------cceeCCCCC
Confidence 4 6999999999 999999887
No 14
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=9e-44 Score=352.61 Aligned_cols=221 Identities=19% Similarity=0.213 Sum_probs=197.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCCeEEEecCCccc
Q 009507 234 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANGAI 308 (533)
Q Consensus 234 avK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~-----~sf~~i~~~G~n~a~ 308 (533)
+|||+.||+.||+|+++++.++.++++.+ ++|+||.|+++.++.... ..|... .+|++++++|.|+++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~tE~el~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~n~~~ 74 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREV------KPGVSTKELDRIAKDFIE-KHGAKPAFLGYYGFPGSVCISVNEVV 74 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHH-HCCCCccccCCCCCCceeEeccccEE
Confidence 69999999999999999999998887766 899999999999977543 445321 367888899999999
Q ss_pred ccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHH
Q 009507 309 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 388 (533)
Q Consensus 309 ~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar 388 (533)
+||.|++ ++|++||++++|+|++|+||++|+|||+++|+|+++|+++|+++++++.+++++++| |+++++|+.+++
T Consensus 75 ~H~~~~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~~~~ 150 (247)
T TIGR00500 75 IHGIPDK---KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKP-GNRIGEIGAAIQ 150 (247)
T ss_pred EecCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Confidence 9999976 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CcCccccccccCCccccCCCCCCCc-CCCCccccCCCEEecCcceeec-----------------CcceE
Q 009507 389 SSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYED-----------------HAFGI 449 (533)
Q Consensus 389 ~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~-~~~~~~L~~GMv~siEPg~y~~-----------------g~~Gi 449 (533)
+.+.+.|+. +.|.+||||| +.+||.|...++. .+++.+|++||||++||++|.+ |.+|+
T Consensus 151 ~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ 228 (247)
T TIGR00500 151 KYAEAKGFSVVREYCGHGIG--RKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSA 228 (247)
T ss_pred HHHHHcCCEeccCccCCccC--cccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEE
Confidence 999999995 5788999999 9999999633221 2357899999999999999973 56899
Q ss_pred EEEEeEEEeecCCCCCCCCcccccceeccc
Q 009507 450 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 479 (533)
Q Consensus 450 riEd~v~Vt~~~~~~~~~~~~~lg~e~LT~ 479 (533)
|+||+|+||++ |+|.||.
T Consensus 229 ried~v~Vt~~------------G~e~Lt~ 246 (247)
T TIGR00500 229 QFEHTIVITDN------------GPEILTE 246 (247)
T ss_pred EEeEEEEEcCC------------ccEEccC
Confidence 99999999999 9999984
No 15
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=2.7e-43 Score=350.17 Aligned_cols=226 Identities=22% Similarity=0.218 Sum_probs=202.3
Q ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCCeEEEecCCc
Q 009507 232 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANG 306 (533)
Q Consensus 232 lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~-----~~sf~~i~~~G~n~ 306 (533)
+-+|||++||+.||+|++++..++.++++.+ ++|+||.|+++.+.+... ..|.. ..+|++++++|.|+
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i------~pG~se~ela~~~~~~~~-~~G~~~~~~~~~~~~~~~~~g~~~ 74 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHV------KPGVTTKELDRIAEEYIR-DQGAIPAPLGYHGFPKSICTSVNE 74 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHH-HCCCEecccCCCCCCcCeEecccc
Confidence 4579999999999999999999998887766 899999999999876543 34432 24677888999999
Q ss_pred ccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHH
Q 009507 307 AIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAF 386 (533)
Q Consensus 307 a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ 386 (533)
+.+|+.|++ ++|++||++++|+|+.|.||++|++||+++|+|+++++++|+.+++++.+++++++| |+++++|+.+
T Consensus 75 ~~~h~~~~~---~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~dv~~~ 150 (252)
T PRK05716 75 VVCHGIPSD---KVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKP-GARLGDIGHA 150 (252)
T ss_pred eeecCCCCC---cccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHH
Confidence 999999876 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCC-CcCccccccccCCccccCCCCCCC-cCCCCccccCCCEEecCcceee-----------------cCcc
Q 009507 387 ARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYE-----------------DHAF 447 (533)
Q Consensus 387 ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~-~~~~~~~L~~GMv~siEPg~y~-----------------~g~~ 447 (533)
+++.+.+.|+. ..|.+||||| +.+||.|..+++ .++++.+|+|||||++||++|. +|.+
T Consensus 151 ~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~ 228 (252)
T PRK05716 151 IQKYAEAEGFSVVREYCGHGIG--RKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSL 228 (252)
T ss_pred HHHHHHHcCCeeecCccccccC--CccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCc
Confidence 99999999995 5688999999 999999974332 2346789999999999999996 6788
Q ss_pred eEEEEEeEEEeecCCCCCCCCcccccceecccCCC
Q 009507 448 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPI 482 (533)
Q Consensus 448 GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~ 482 (533)
|+|+||+|+||++ |+|.||..|.
T Consensus 229 g~~~ed~v~Vt~~------------G~e~Lt~~~~ 251 (252)
T PRK05716 229 SAQYEHTVAVTED------------GPEILTLRPE 251 (252)
T ss_pred EEeeeeEEEEcCC------------ccEEeeCCCC
Confidence 9999999999999 9999999884
No 16
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.4e-42 Score=345.68 Aligned_cols=224 Identities=22% Similarity=0.159 Sum_probs=200.2
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCCeEEEecCC
Q 009507 231 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGAN 305 (533)
Q Consensus 231 ~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~-----~~sf~~i~~~G~n 305 (533)
++++|||+.||+.||+|+++++.++.++++.+ ++|+||.|+++.+.+.. ...|.. ..+|++++++|.|
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i------~pG~te~el~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~n 78 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAV------EPGMTTKELDRIAEKRL-EEHGAIPSPEGYYGFPGSTCISVN 78 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhc------cCCCCHHHHHHHHHHHH-HHCCCEeCcccCCCCCcceEecCC
Confidence 35689999999999999999999999887766 89999999999998754 344543 2467888888999
Q ss_pred cccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHH
Q 009507 306 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 385 (533)
Q Consensus 306 ~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~ 385 (533)
.+.+|+.|++ ++|++||++++|+|+.|.||++|++||+++|+|+++++++|+.+++++.+++++++| |+++++|+.
T Consensus 79 ~~~~h~~p~~---~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~ 154 (255)
T PRK12896 79 EEVAHGIPGP---RVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKA-GRPLNDIGR 154 (255)
T ss_pred CeeEecCCCC---ccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9999999876 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCc--CCCCccccCCCEEecCccee-----------------ecC
Q 009507 386 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR--YGNMTPLVEGMIVSNEPGYY-----------------EDH 445 (533)
Q Consensus 386 ~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~--~~~~~~L~~GMv~siEPg~y-----------------~~g 445 (533)
++++.+.+.|+. +.|.+||||| +.+||.|..+... ++++.+|++||||++||++| .+|
T Consensus 155 ~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~ 232 (255)
T PRK12896 155 AIEDFAKKNGYSVVRDLTGHGVG--RSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDK 232 (255)
T ss_pred HHHHHHHHcCCEeccCcccCCcC--cccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCC
Confidence 999999999995 6789999999 9999999645422 34678999999999999998 468
Q ss_pred cceEEEEEeEEEeecCCCCCCCCcccccceeccc
Q 009507 446 AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 479 (533)
Q Consensus 446 ~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~ 479 (533)
.+|+|+||+|+||++ |+|.||.
T Consensus 233 ~~~~~~edtv~vt~~------------G~e~Lt~ 254 (255)
T PRK12896 233 SLSAQFEHTVVVTRD------------GPEILTD 254 (255)
T ss_pred CeEEEEEEEEEEcCC------------cceecCC
Confidence 889999999999999 9999985
No 17
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.9e-42 Score=338.46 Aligned_cols=213 Identities=20% Similarity=0.079 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCC------CCeEEEecCCcccccccCC
Q 009507 241 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTS------FDTISGSGANGAIIHYKPE 314 (533)
Q Consensus 241 I~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~s------f~~i~~~G~n~a~~hy~p~ 314 (533)
|+.||+|+++++.++.++++.+ ++|+||.|+++.+.+... ..|..+.+ +.+++++|+|++.+|+.|+
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i------~pG~tE~ei~a~~~~~~~-~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~ 73 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAI------REGVPEYEVALAGTQAMV-REIAKTFPEVELMDTWTWFQSGINTDGAHNPVT 73 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHH-HcCCccCCcccccCcceEEEeeccccccCCCCC
Confidence 6789999999999999888777 899999999999876533 34432222 2368999999999999886
Q ss_pred CCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHc
Q 009507 315 PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI 394 (533)
Q Consensus 315 ~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~ 394 (533)
+ ++|++||+|++|+|+.|+||++|++|||++|+|+++|+++|+++++++.+++++++| |+++.+|++++++.+.++
T Consensus 74 ~---r~l~~GD~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rp-G~~~~~v~~a~~~~~~~~ 149 (228)
T cd01090 74 N---RKVQRGDILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKP-GARCKDIAAELNEMYREH 149 (228)
T ss_pred C---cccCCCCEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHc
Confidence 5 999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CC--CCcCccccccccCCccccCCCCC--CCcCCCCccccCCCEEecCcceeec----CcceEEEEEeEEEeecCCCCCC
Q 009507 395 GL--DYRHGTGHGVGAALNVHEGPQSI--SFRYGNMTPLVEGMIVSNEPGYYED----HAFGIRIENLLYVKEVGTPNRF 466 (533)
Q Consensus 395 G~--~~~h~~GHGvG~~l~vhE~P~~i--~~~~~~~~~L~~GMv~siEPg~y~~----g~~GiriEd~v~Vt~~~~~~~~ 466 (533)
|+ .+.|++||||| +.+||.|... ....+++.+|+|||||++||++|.+ |.+|+|+||+|+||++
T Consensus 150 G~~~~~~~~~GHgiG--l~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~~------ 221 (228)
T cd01090 150 DLLRYRTFGYGHSFG--VLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGQPGAGGYREHDILVINEN------ 221 (228)
T ss_pred CCCcccccccCcccc--cccccCCCccccccCCCCCCccCCCCEEEECCEEeecccCCCCcEEEeeeEEEECCC------
Confidence 98 36899999999 9999988532 1223466899999999999999984 7899999999999998
Q ss_pred CCcccccceecc
Q 009507 467 GGVSYLGFEKLT 478 (533)
Q Consensus 467 ~~~~~lg~e~LT 478 (533)
|+|.||
T Consensus 222 ------G~e~Lt 227 (228)
T cd01090 222 ------GAENIT 227 (228)
T ss_pred ------ccccCc
Confidence 999998
No 18
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1.5e-42 Score=343.12 Aligned_cols=212 Identities=29% Similarity=0.315 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcc
Q 009507 241 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 320 (533)
Q Consensus 241 I~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~ 320 (533)
|+.||+|+++.+.++.++++.+ ++|+||.|+++.+++... ..|.. .+|++++++|+|++.+|+.|++ ++
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i------~pG~tE~ei~~~~~~~~~-~~G~~-~~~~~~v~~g~~~~~~H~~~~~---~~ 69 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKAS------RPGMSEYELEAEFEYEFR-SRGAR-LAYSYIVAAGSNAAILHYVHND---QP 69 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCcHHHHHHHHHHHHH-HcCCC-cCCCCeEEECCCccccCCCcCC---Cc
Confidence 6899999999999999888776 899999999999987544 45554 6889999999999999999875 89
Q ss_pred cCCCCeEEEEeceeecCcccceeecCcC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC---
Q 009507 321 VDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--- 396 (533)
Q Consensus 321 i~~gd~vliD~G~~y~gy~tDitRT~~~-G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~--- 396 (533)
|++||++++|+|++|+||++|++|||++ |+|+++++++|+.+++++.+++++++| |+++++|+.++++.+++.|.
T Consensus 70 l~~Gd~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~~v~~a~~~~~~~~~~~~g 148 (243)
T cd01087 70 LKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKP-GVSYEDIHLLAHRVLAEGLKELG 148 (243)
T ss_pred CCCCCEEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999 699999999999999999999999999 99999999999999976531
Q ss_pred -----------------CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecC----------cceE
Q 009507 397 -----------------DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDH----------AFGI 449 (533)
Q Consensus 397 -----------------~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g----------~~Gi 449 (533)
.+.|++||||| +++||.|. +...++++.+|++||||++||++|.++ .+|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~h~~GhgiG--l~~~e~p~-~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~ 225 (243)
T cd01087 149 ILKGDVDEIVESGAYAKFFPHGLGHYLG--LDVHDVGG-YLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGI 225 (243)
T ss_pred cccCchHhhhhhhhhhhhcCCCCccccC--cccccCcc-ccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEE
Confidence 46899999999 99999997 311234678999999999999999997 7899
Q ss_pred EEEEeEEEeecCCCCCCCCcccccceeccc
Q 009507 450 RIENLLYVKEVGTPNRFGGVSYLGFEKLTF 479 (533)
Q Consensus 450 riEd~v~Vt~~~~~~~~~~~~~lg~e~LT~ 479 (533)
|+||+|+||++ |+|.||.
T Consensus 226 ~ied~v~Vt~~------------G~e~Lt~ 243 (243)
T cd01087 226 RIEDDVLVTED------------GPENLTR 243 (243)
T ss_pred EeeeEEEEcCC------------cceeCcC
Confidence 99999999998 9999984
No 19
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=1.4e-42 Score=341.52 Aligned_cols=241 Identities=28% Similarity=0.387 Sum_probs=208.8
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCc
Q 009507 227 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANG 306 (533)
Q Consensus 227 ~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~ 306 (533)
..+.+.|.||++.||+.||.|+++.+.|+.++++.+ ++|+.|+++...++...-...|+...||.+|+++|+|+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~------~pg~~Eyq~eslF~hh~y~~GGcRh~sYtcIc~sG~ns 250 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAV------RPGMKEYQLESLFLHHSYSYGGCRHLSYTCICASGDNS 250 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhC------CchHhHHhHHHHHHHhhhccCCccccccceeeecCCCc
Confidence 456789999999999999999999999999999988 99999999999998765567788999999999999999
Q ss_pred cccccc-CCCCCCcccCCCCeEEEEeceeecCcccceeecCcC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHH
Q 009507 307 AIIHYK-PEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLD 384 (533)
Q Consensus 307 a~~hy~-p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~-G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld 384 (533)
++.||. +..++++.|+.||+.|+|+|+.|.+|++|||++|.. |+.|++||.+|++|+.++.+.+++++| |+...+++
T Consensus 251 ~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~Kp-Gv~W~Dmh 329 (492)
T KOG2737|consen 251 AVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKP-GVWWVDMH 329 (492)
T ss_pred ceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCC-CCccccHH
Confidence 999992 223345999999999999999999999999999998 999999999999999999999999999 99999999
Q ss_pred HHHHHHH----HHcCC----------------CCcCccccccccCCccccC---CCCCCCcC--------CCCccccCCC
Q 009507 385 AFARSSL----WKIGL----------------DYRHGTGHGVGAALNVHEG---PQSISFRY--------GNMTPLVEGM 433 (533)
Q Consensus 385 ~~ar~~l----~~~G~----------------~~~h~~GHGvG~~l~vhE~---P~~i~~~~--------~~~~~L~~GM 433 (533)
.++.+++ .+.|+ .++||.||-+| |+||+- |.... ++ .....|++||
T Consensus 330 ~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lG--lDvHDvGGyp~~~~-rp~~P~l~~LR~aR~L~e~M 406 (492)
T KOG2737|consen 330 KLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLG--LDVHDVGGYPEGVE-RPDEPGLRSLRTARHLKEGM 406 (492)
T ss_pred HHHHHHHHHHHHhcCceeccHHHHHHhccCeeecccccccccc--ccccccCCCCCCCC-CCCcchhhhhhhhhhhhcCc
Confidence 9987655 34443 47999999999 999982 21110 11 1346799999
Q ss_pred EEecCcceee--------------------------cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCCCCCcc
Q 009507 434 IVSNEPGYYE--------------------------DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLV 487 (533)
Q Consensus 434 v~siEPg~y~--------------------------~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~li 487 (533)
|+++|||+|. .+.+|+||||.|+||++ |.|+||.+|.+.+-|
T Consensus 407 viTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~------------G~enlt~vprtveeI 474 (492)
T KOG2737|consen 407 VITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKS------------GIENLTCVPRTVEEI 474 (492)
T ss_pred EEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEecc------------ccccccCCCCCHHHH
Confidence 9999999995 16789999999999999 999999999766555
Q ss_pred ch
Q 009507 488 DL 489 (533)
Q Consensus 488 ~~ 489 (533)
+.
T Consensus 475 Ea 476 (492)
T KOG2737|consen 475 EA 476 (492)
T ss_pred HH
Confidence 43
No 20
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.1e-41 Score=352.41 Aligned_cols=235 Identities=17% Similarity=0.188 Sum_probs=205.9
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCC----CCCCCeEEEe
Q 009507 227 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL----DTSFDTISGS 302 (533)
Q Consensus 227 ~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~----~~sf~~i~~~ 302 (533)
+.+...|+|||++||+.||+|++++..++..+++.+ ++|+||.||++.++++..+..++. ..+|+.++++
T Consensus 129 ~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~i------rpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svct 202 (396)
T PLN03158 129 SDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAI------KPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCT 202 (396)
T ss_pred cccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeee
Confidence 456678999999999999999999999999888777 899999999999988654443332 1468889999
Q ss_pred cCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcch
Q 009507 303 GANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFV 382 (533)
Q Consensus 303 G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ 382 (533)
|.|..++|+.|+. ++|++||+|++|+|+.|+||++|++|||++|+++++++++|+++.+++.+++++++| |++.++
T Consensus 203 s~N~~i~Hgip~~---r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~~aI~~vkP-Gv~~~d 278 (396)
T PLN03158 203 SVNEVICHGIPDA---RKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKP-GVRYRE 278 (396)
T ss_pred cccccccCCCCCC---ccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCCHHH
Confidence 9999999999976 999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCcC-CCCccccCCCEEecCcceee-----------------
Q 009507 383 LDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYE----------------- 443 (533)
Q Consensus 383 ld~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~~-~~~~~L~~GMv~siEPg~y~----------------- 443 (533)
|+.++++++.+.|+. +.|.+||||| +.+||.|....+.. ....+|+|||||+|||++|.
T Consensus 279 I~~~i~~~~~~~G~~~v~~~~GHGIG--~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~ 356 (396)
T PLN03158 279 VGEVINRHATMSGLSVVKSYCGHGIG--ELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTA 356 (396)
T ss_pred HHHHHHHHHHHcCCCccCCccCCccc--cccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEEec
Confidence 999999999999996 5788999999 99999997332211 13368999999999999985
Q ss_pred cCcceEEEEEeEEEeecCCCCCCCCcccccceeccc-CCCCCC
Q 009507 444 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQTK 485 (533)
Q Consensus 444 ~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~-~P~~~~ 485 (533)
+|.+|+|+||+|+||++ |+|.||. .|....
T Consensus 357 dG~~~aq~E~tvlVTe~------------G~EiLT~~~~~~~~ 387 (396)
T PLN03158 357 DGKRSAQFEHTLLVTET------------GVEVLTARLPSSPD 387 (396)
T ss_pred CCceeeEeeeEEEEeCC------------cceECCCCCCCCcc
Confidence 35567899999999999 9999996 665544
No 21
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-41 Score=334.50 Aligned_cols=372 Identities=22% Similarity=0.294 Sum_probs=270.1
Q ss_pred CCCCCCCCccccccccc----cCcCHHHHHHHHHHHHHHcCCCEEEEcc-C---------------CccccccCcccCCC
Q 009507 54 SRPKPPNKPIRVHALKY----AGLDVASKLSSLRSDLVDAGSSAIVISM-L---------------DEIAWLLNLRGSDV 113 (533)
Q Consensus 54 ~rP~~p~~~i~~~~~~~----~g~~~~~Ki~~lr~~m~~~g~dallls~-~---------------d~IawL~n~rg~di 113 (533)
.+|.....|-...|-+. +-.++..|+.||.+.|.++. .+||++ + .|+.||+|.--.|
T Consensus 42 GQpt~~thPhli~pgEltPgis~~Ey~~RR~rl~~ll~~~a--~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~- 118 (488)
T KOG2414|consen 42 GQPTSVTHPHLIQPGELTPGISATEYKERRSRLMSLLPANA--MVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPD- 118 (488)
T ss_pred CCCCCCCCccccCCCCcCCCccHHHHHHHHHHHHHhCCccc--EEEEccCchhhhcCccceeeecCCCeEEEeccCCCC-
Confidence 57888888887777764 44578899999999998754 333333 2 3466666655333
Q ss_pred CCCcceeEEEEEe--cC---ceEEEEeCCCCCHHHHhhhhcCCe----------EEeeCccHHHHHHHHHhCCCeEEEeC
Q 009507 114 PHSPVMYAYLIVE--MD---RAKLFVDDSKVTPDVMDHLKNAGV----------ELRPYNSILSEIKSLAAQGAQLWLDP 178 (533)
Q Consensus 114 ~~~Pv~~s~liv~--~~---~~~Lfv~~~~~~~~~~~~l~~~~v----------~v~~y~~~~~~l~~l~~~~~~i~~d~ 178 (533)
+.+++. +. ...+|++...-..+.++-.. .|+ +-.+-.++...|.+.......++.|.
T Consensus 119 -------~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~r-tG~~~a~~if~v~ea~~~s~l~~~L~k~~~~~~~i~~d~ 190 (488)
T KOG2414|consen 119 -------AVLLLLKGDERSVAYDLFMPPKDPTAELWEGPR-TGTDGASEIFGVDEAYPLSGLAVFLPKMSALLYKIWQDK 190 (488)
T ss_pred -------eeEEEeecccccceeeEecCCCCccHHhhcCcc-ccchhhhhhhcchhhcchhhHHHHHHHHHhhhhhhhhhh
Confidence 445553 22 24577765433334333221 111 11222344455554433234556554
Q ss_pred CCchH-HHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHH
Q 009507 179 SSVNA-AIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQ 257 (533)
Q Consensus 179 ~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~ 257 (533)
..... ..+..++.... .++-..+++...+.+.++|.||||.|++.||+|+.+++.++-+
T Consensus 191 ~ss~a~s~~~~~~dl~~--------------------~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~ 250 (488)
T KOG2414|consen 191 ASSKASSALKNMQDLLG--------------------FQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSE 250 (488)
T ss_pred ccchhhhHHHHHHhhhh--------------------hcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHH
Confidence 33221 11111111100 0111224667788999999999999999999999999987654
Q ss_pred HHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecC
Q 009507 258 FWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVD 337 (533)
Q Consensus 258 ~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~g 337 (533)
.+ ..+++...|..+.+.++. +-...|+.-..|+++|+.|.|+..+||..++ ..+.++|+||+|.|+.+.|
T Consensus 251 ~m------~~sr~~~~E~~l~a~~ey-e~r~rGad~~AYpPVVAgG~na~tIHY~~Nn---q~l~d~emVLvDaGcelgG 320 (488)
T KOG2414|consen 251 TM------FGSRDFHNEAALSALLEY-ECRRRGADRLAYPPVVAGGKNANTIHYVRNN---QLLKDDEMVLVDAGCELGG 320 (488)
T ss_pred HH------hhccCCcchhhHhhhhhh-heeecCccccccCCeeecCcccceEEEeecc---cccCCCcEEEEecCcccCc
Confidence 43 234778899999999984 3345788889999999999999999999765 8999999999999999999
Q ss_pred cccceeecCcC-CCCCHHHHHHHHHHHHHHHHHHHccCC-CCCCcchHHHHHH----HHHHHcCC-------------CC
Q 009507 338 GTTDITRTVHF-GEPTAREKECFTRVLQGHIALDQAIFP-QSTPGFVLDAFAR----SSLWKIGL-------------DY 398 (533)
Q Consensus 338 y~tDitRT~~~-G~p~~e~~~~y~~vl~~~~~~~~~~~P-~G~~~~~ld~~ar----~~l~~~G~-------------~~ 398 (533)
|++||||||.+ |..|+-|+++|++|+..|...+..++| .|++..+|+.... +.|.+.|. -+
T Consensus 321 YvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klc 400 (488)
T KOG2414|consen 321 YVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLC 400 (488)
T ss_pred eEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcC
Confidence 99999999998 999999999999999999999999987 5889999987654 44555564 37
Q ss_pred cCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcc---------eEEEEEeEEEeecCCCCCCCCc
Q 009507 399 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAF---------GIRIENLLYVKEVGTPNRFGGV 469 (533)
Q Consensus 399 ~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~---------GiriEd~v~Vt~~~~~~~~~~~ 469 (533)
+|+.||-+| |+||+-|. ++ .+.+|+||||||||||+|+|..+ ||||||.|+|+++
T Consensus 401 PHhVgHyLG--mDVHD~p~-v~----r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~ed--------- 464 (488)
T KOG2414|consen 401 PHHVGHYLG--MDVHDCPT-VS----RDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGED--------- 464 (488)
T ss_pred CcccchhcC--cccccCCC-CC----CCccCCCCceEEecCceecCccCCCchHhcCceEEeecceEeccC---------
Confidence 899999999 99999997 43 46789999999999999997543 9999999999999
Q ss_pred ccccceecc-cCCCCCC
Q 009507 470 SYLGFEKLT-FVPIQTK 485 (533)
Q Consensus 470 ~~lg~e~LT-~~P~~~~ 485 (533)
|.|.|| .+|.+.+
T Consensus 465 ---g~evLT~a~pKei~ 478 (488)
T KOG2414|consen 465 ---GPEVLTAACPKEII 478 (488)
T ss_pred ---CceeehhcccCCHH
Confidence 889999 5894433
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=4.6e-40 Score=317.09 Aligned_cols=204 Identities=37% Similarity=0.488 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcc
Q 009507 241 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 320 (533)
Q Consensus 241 I~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~ 320 (533)
|+.||+|+++++.++.++.+.+ ++|+||.|+++.++.... ..|..+.+|++++++|+|+..+|+.|++ ++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~-~~g~~~~~~~~~v~~g~~~~~~h~~~~~---~~ 70 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFI------KPGMTEREVAAELEYFMR-KLGAEGPSFDTIVASGPNSALPHGVPSD---RK 70 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCCCCCCCCcEEEECccccccCCCCCC---cC
Confidence 6799999999999998877665 899999999999987654 5677778999999999999999999875 89
Q ss_pred cCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC--CC
Q 009507 321 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DY 398 (533)
Q Consensus 321 i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~--~~ 398 (533)
|++||++++|+|++|+||++|++||+++|+|+++++++|+.+++++.+++++++| |+++++|+.++++.+++.|+ +|
T Consensus 71 l~~gd~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~di~~~~~~~~~~~g~~~~~ 149 (208)
T cd01092 71 IEEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKP-GVTAKEVDKAARDVIEEAGYGEYF 149 (208)
T ss_pred cCCCCEEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999998 57
Q ss_pred cCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeec
Q 009507 399 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 460 (533)
Q Consensus 399 ~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~ 460 (533)
.|++||||| +..||.|. +.. +++.+|++||||++||++|.++.+|+|+||+|+||++
T Consensus 150 ~~~~Gh~iG--~~~~e~p~-i~~--~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~ 206 (208)
T cd01092 150 IHRTGHGVG--LEVHEAPY-ISP--GSDDVLEEGMVFTIEPGIYIPGKGGVRIEDDVLVTED 206 (208)
T ss_pred CCCCccccC--cccCcCCC-cCC--CCCCCcCCCCEEEECCeEEecCCCEEEeeeEEEECCC
Confidence 999999999 99999997 653 3778999999999999999999999999999999987
No 23
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.3e-39 Score=320.99 Aligned_cols=214 Identities=23% Similarity=0.230 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCCeEEEecCCcccccccCCC
Q 009507 241 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGANGAIIHYKPEP 315 (533)
Q Consensus 241 I~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~-----~~sf~~i~~~G~n~a~~hy~p~~ 315 (533)
|+.||+|+.++..++.++++.+ ++|+||.|+++.+.+... ..|.. ..+|+..+.+|.|++.+|+.|++
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~------~pG~tE~ev~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 73 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAI------KPGVTTKELDQIAHEFIE-EHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDD 73 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHH-HcCCCcccccCCCCCcceecCCCCceeCCCCCC
Confidence 6889999999999999887766 899999999999987543 44542 23567788899999999999875
Q ss_pred CCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcC
Q 009507 316 GKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIG 395 (533)
Q Consensus 316 ~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G 395 (533)
++|++||++++|+|+.|.||++|++||+++|+|+++++++|+.+++++.+++++++| |+++.+|+.++++.+.+.|
T Consensus 74 ---~~l~~Gd~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~G 149 (238)
T cd01086 74 ---RVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKP-GNRIGDIGHAIEKYAEKNG 149 (238)
T ss_pred ---cccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CC-CcCccccccccCCccccCCCCCC-CcCCCCccccCCCEEecCcceee-----------------cCcceEEEEEeEE
Q 009507 396 LD-YRHGTGHGVGAALNVHEGPQSIS-FRYGNMTPLVEGMIVSNEPGYYE-----------------DHAFGIRIENLLY 456 (533)
Q Consensus 396 ~~-~~h~~GHGvG~~l~vhE~P~~i~-~~~~~~~~L~~GMv~siEPg~y~-----------------~g~~GiriEd~v~ 456 (533)
+. +.|.+||||| +.+||.|..+. ..++++.+|++||||++||++|. +|.+|+|+||+|+
T Consensus 150 ~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~ 227 (238)
T cd01086 150 YSVVREFGGHGIG--RKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVL 227 (238)
T ss_pred cceecCccccCCC--CccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEE
Confidence 95 5788999999 99999997442 22346789999999999999996 6788999999999
Q ss_pred EeecCCCCCCCCcccccceeccc
Q 009507 457 VKEVGTPNRFGGVSYLGFEKLTF 479 (533)
Q Consensus 457 Vt~~~~~~~~~~~~~lg~e~LT~ 479 (533)
||++ |+|.||.
T Consensus 228 Vte~------------G~e~Lt~ 238 (238)
T cd01086 228 ITED------------GPEILTL 238 (238)
T ss_pred EcCC------------cceeCCC
Confidence 9999 9999984
No 24
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1.3e-39 Score=320.71 Aligned_cols=217 Identities=19% Similarity=0.218 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCC---------CCCCCeEEEecCCc-ccc
Q 009507 241 LEGMLNSHLRDAAALAQF-WVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL---------DTSFDTISGSGANG-AII 309 (533)
Q Consensus 241 I~~~r~A~~~~~~a~~~~-~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~---------~~sf~~i~~~G~n~-a~~ 309 (533)
++.+|+|+.++..+|..+ ...|++.|+....+|+.+++..++.... ..+.. +.+|++|+++|+|+ +.+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~-~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIE-DKKKYKAKLDPEQLDWCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHh-CchhhhcCCCHHHcCcccCCeEeECcCcccCC
Confidence 468999999999999755 4578888843333999999999998643 44433 67999999999999 899
Q ss_pred cccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHH
Q 009507 310 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS 389 (533)
Q Consensus 310 hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~ 389 (533)
|+.+++ +.+..|+++++|+|+.|+||++|+||||++| |+++|+++|+.+++++.+++++++| |+++++|+.++++
T Consensus 80 h~~~s~---~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkp-G~~~~dv~~~a~~ 154 (243)
T cd01091 80 SSSSSD---KLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKP-GAKLSDVYQKTLD 154 (243)
T ss_pred CCCCCc---cccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHH
Confidence 988765 8899999999999999999999999999998 7999999999999999999999999 9999999999999
Q ss_pred HHHHcCC----CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCccee-ecC---------cceEEEEEeE
Q 009507 390 SLWKIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY-EDH---------AFGIRIENLL 455 (533)
Q Consensus 390 ~l~~~G~----~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y-~~g---------~~GiriEd~v 455 (533)
++.+.|. .|.|++||||| |++||.|..++. +++.+|++||||++|||+| .++ .||+||||+|
T Consensus 155 ~i~~~~~~~~~~~~~~~GHgiG--le~hE~~~~l~~--~~~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV 230 (243)
T cd01091 155 YIKKKKPELEPNFTKNLGFGIG--LEFRESSLIINA--KNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTI 230 (243)
T ss_pred HHHHhChhHHHhCcCCcccccC--cccccCccccCC--CCCCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEE
Confidence 9999873 47899999999 999998865553 3678999999999999999 443 7899999999
Q ss_pred EEeecCCCCCCCCcccccc-eeccc
Q 009507 456 YVKEVGTPNRFGGVSYLGF-EKLTF 479 (533)
Q Consensus 456 ~Vt~~~~~~~~~~~~~lg~-e~LT~ 479 (533)
+||++ |+ |.||.
T Consensus 231 ~Vt~~------------G~~~~LT~ 243 (243)
T cd01091 231 LVTED------------EPAIVLTN 243 (243)
T ss_pred EEcCC------------CCceecCC
Confidence 99998 88 88873
No 25
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.9e-38 Score=305.96 Aligned_cols=203 Identities=31% Similarity=0.447 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCccc
Q 009507 242 EGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVV 321 (533)
Q Consensus 242 ~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i 321 (533)
|.||+|+++++.++.++++++ ++|+||.|+++.+.+......|..+.+|++++++|+|+.++||.|++ ++|
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~---~~l 71 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEAL------RPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTPTD---RRL 71 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------STTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBCCS---SBE
T ss_pred CHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceeccc---eee
Confidence 689999999999999998888 89999999999999874455677788999999999999999998854 999
Q ss_pred CCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC--CCc
Q 009507 322 DSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DYR 399 (533)
Q Consensus 322 ~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~--~~~ 399 (533)
++||++.+|+|++|.||++|++||+++| |+++++++|+.+++++.+++++++| |+++++|++++++.+.+.|+ .+.
T Consensus 72 ~~gd~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~~~~~~ 149 (207)
T PF00557_consen 72 QEGDIVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRP-GVTGSDVYEAVREVLEEYGLEEPYP 149 (207)
T ss_dssp STTEEEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-ST-TSBHHHHHHHHHHHHHHTTEGEEBT
T ss_pred ecCCcceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhccc-ccccchhhHHHHHHHHhhcccceee
Confidence 9999999999999999999999999999 9999999999999999999999999 99999999999999999998 689
Q ss_pred CccccccccCCccccC-CCCCCCcCCCCccccCCCEEecCccee-ecCcceEEEEEeEEEee
Q 009507 400 HGTGHGVGAALNVHEG-PQSISFRYGNMTPLVEGMIVSNEPGYY-EDHAFGIRIENLLYVKE 459 (533)
Q Consensus 400 h~~GHGvG~~l~vhE~-P~~i~~~~~~~~~L~~GMv~siEPg~y-~~g~~GiriEd~v~Vt~ 459 (533)
|.+||||| +.+||. |. +.. .+++.+|++||||++||++| .++.+|+|+||+++||+
T Consensus 150 ~~~GH~iG--~~~~~~~P~-i~~-~~~~~~l~~gmv~~iep~~~~~~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 150 HGLGHGIG--LEFHEPGPN-IAR-PGDDTVLEPGMVFAIEPGLYFIPGWGGVRFEDTVLVTE 207 (207)
T ss_dssp SSSEEEES--SSSSEEEEE-ESS-TTTSSB--TTBEEEEEEEEEEETTSEEEEEBEEEEEES
T ss_pred eccccccc--cccccccee-eec-ccccceecCCCceeEeeeEEccCCCcEEEEEEEEEECc
Confidence 99999999 999997 97 531 24788999999999999999 67999999999999986
No 26
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=2.4e-36 Score=289.35 Aligned_cols=203 Identities=33% Similarity=0.460 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcc
Q 009507 241 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 320 (533)
Q Consensus 241 I~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~ 320 (533)
|+.||+|+++.+.++..++..+ ++|+||.|+++.+.+... ..|. +.+|++++++|+|+..+||.|++ ++
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~------~~G~te~ei~~~~~~~~~-~~g~-~~~~~~~v~~g~~~~~~h~~~~~---~~ 69 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAI------RPGVTEAEVAAAIEQALR-AAGG-YPAGPTIVGSGARTALPHYRPDD---RR 69 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCC-CCCCCcEEEECccccCcCCCCCC---CC
Confidence 5789999999999999888776 899999999999987643 4555 67889999999999999999875 89
Q ss_pred cCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC--CC
Q 009507 321 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DY 398 (533)
Q Consensus 321 i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~--~~ 398 (533)
+++||++++|+|++|.||++|++||+++|+|+++++++|+.+.+++.+++++++| |+++.+|+.++++.+.+.|+ ++
T Consensus 70 i~~gd~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~p-G~~~~ei~~~~~~~~~~~g~~~~~ 148 (207)
T cd01066 70 LQEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRP-GVTAEEVDAAAREVLEEHGLGPNF 148 (207)
T ss_pred cCCCCEEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999998 57
Q ss_pred cCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeec
Q 009507 399 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 460 (533)
Q Consensus 399 ~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~ 460 (533)
.|++||||| +.+||.|. +.. +++.+|++||||++||++|.++.+|+|+||+++||++
T Consensus 149 ~~~~Gh~iG--~~~~e~~~-~~~--~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~ 205 (207)
T cd01066 149 GHRTGHGIG--LEIHEPPV-LKA--GDDTVLEPGMVFAVEPGLYLPGGGGVRIEDTVLVTED 205 (207)
T ss_pred CCCCccccC--cccCCCCC-cCC--CCCCCcCCCCEEEECCEEEECCCcEEEeeeEEEEeCC
Confidence 899999999 99999997 443 3678999999999999999998899999999999987
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=5.5e-36 Score=293.21 Aligned_cols=211 Identities=12% Similarity=0.111 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHh---------hCCCCCCCCCeEEEecCCcccccc
Q 009507 241 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---------QSGFLDTSFDTISGSGANGAIIHY 311 (533)
Q Consensus 241 I~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~---------~~g~~~~sf~~i~~~G~n~a~~hy 311 (533)
++.||+|+++++.++.++++++ ++|+||.|++...+++... ..|..+.+|+++++ .|++.+||
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i------~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~ 72 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLC------VPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHF 72 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecC
Confidence 3689999999999999888777 8999999998776554332 14566789988887 48889999
Q ss_pred cCCC-CCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCH-----HHHHHHHHHHHHHHHHHHccCCCCCCcchHHH
Q 009507 312 KPEP-GKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTA-----REKECFTRVLQGHIALDQAIFPQSTPGFVLDA 385 (533)
Q Consensus 312 ~p~~-~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~-----e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~ 385 (533)
.|.+ .++++|++||++++|+|+.|+||++|+||||++|+|++ +++++|+++++++.+++++++| |+++++|+.
T Consensus 73 ~p~~~~~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kp-G~~~~dv~~ 151 (228)
T cd01089 73 SPLKSDATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRP-GNQNSDITE 151 (228)
T ss_pred CCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHH
Confidence 9864 25689999999999999999999999999999999875 8999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCCCC
Q 009507 386 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPN 464 (533)
Q Consensus 386 ~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~~~ 464 (533)
++++.+.+.|+. +...+||++|++++.|+++..+ ..+|++||||++||++|.+|.+|+|+||+|+||++
T Consensus 152 a~~~~~~~~G~~~~~~~~~h~~g~~~~~~~~~~~~------~~~l~~gmvf~~ep~~~~~g~~~~~~~~Tv~vt~~---- 221 (228)
T cd01089 152 AIQKVIVDYGCTPVEGVLSHQLKRVVSSGEGKAKL------VECVKHGLLFPYPVLYEKEGEVVAQFKLTVLLTPN---- 221 (228)
T ss_pred HHHHHHHHcCCEEecCccccCcCceEecCCCCccc------hhhccCCcccccceeEccCCCeEEEEEEEEEEcCC----
Confidence 999999999962 2223344444445677776422 46799999999999999999999999999999998
Q ss_pred CCCCcccccceecc
Q 009507 465 RFGGVSYLGFEKLT 478 (533)
Q Consensus 465 ~~~~~~~lg~e~LT 478 (533)
|.|.||
T Consensus 222 --------G~e~lt 227 (228)
T cd01089 222 --------GVTVLT 227 (228)
T ss_pred --------CCeeCC
Confidence 999998
No 28
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=5.9e-31 Score=255.90 Aligned_cols=222 Identities=24% Similarity=0.275 Sum_probs=190.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHh------hCCCCCCCCCeEEEecCCccc
Q 009507 235 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK------QSGFLDTSFDTISGSGANGAI 308 (533)
Q Consensus 235 vK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~------~~g~~~~sf~~i~~~G~n~a~ 308 (533)
+|++.||+.||+|+++...++..+...+ +||+|-.|+....+++... ..|+.+ |+--++..-|-..
T Consensus 5 ikt~~eiek~r~Ag~i~a~~l~~~~~~v------~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g--~~~~~ciSvNe~v 76 (255)
T COG0024 5 IKTPEEIEKMREAGKIAAKALKEVASLV------KPGVTTLELDEIAEEFIREKGAYPAFLGYKG--FPFPTCISVNEVV 76 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCCHHHHHHHHHHHHHHcCceehhccCcC--CCcceEeehhhee
Confidence 8999999999999999998887766554 8999999999999987553 344545 4444555678888
Q ss_pred ccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCC-HHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHH
Q 009507 309 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPT-AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 387 (533)
Q Consensus 309 ~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~-~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~a 387 (533)
+||.|+ .+++|++||++.||+|++++||++|.++|+.+|+.+ +..+++.+++.+++.+++++++| |++..+|-.+.
T Consensus 77 ~HgiP~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkp-G~~l~~Ig~aI 153 (255)
T COG0024 77 AHGIPG--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKP-GARLGDIGRAI 153 (255)
T ss_pred eecCCC--CCcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHH
Confidence 999998 469999999999999999999999999999999766 46677999999999999999999 99999999999
Q ss_pred HHHHHHcCCC-CcCccccccccCCccccCCCCCCCcC-CCCccccCCCEEecCcceee------------------cCcc
Q 009507 388 RSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYE------------------DHAF 447 (533)
Q Consensus 388 r~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~~-~~~~~L~~GMv~siEPg~y~------------------~g~~ 447 (533)
.++..+.|+. ....+||||| ...||+|+...+.. +....|+|||||+|||.+-. ++..
T Consensus 154 q~~~~~~G~~vVr~~~GHgig--~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~ 231 (255)
T COG0024 154 QEYAESRGFSVVRNLTGHGIG--RELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSL 231 (255)
T ss_pred HHHHHHcCCEEeecccCCccC--cccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCE
Confidence 9999999995 5677999999 79999999766432 23478999999999998753 3456
Q ss_pred eEEEEEeEEEeecCCCCCCCCcccccceecccCC
Q 009507 448 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 481 (533)
Q Consensus 448 GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P 481 (533)
..+.|.|++||++ |+|.||..+
T Consensus 232 ~aq~EHTv~Vt~~------------g~eilT~~~ 253 (255)
T COG0024 232 SAQFEHTVIVTED------------GCEILTLRP 253 (255)
T ss_pred EeEEEEEEEEeCC------------CcEEeeCCC
Confidence 7899999999999 999999765
No 29
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.97 E-value=6.5e-30 Score=266.92 Aligned_cols=199 Identities=13% Similarity=0.050 Sum_probs=169.6
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhh---------CCCCCCCCCeEEEec
Q 009507 233 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---------SGFLDTSFDTISGSG 303 (533)
Q Consensus 233 ravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~---------~g~~~~sf~~i~~~G 303 (533)
-.+|||+||+.||+|+++...++..+..++ ++|+|+.|+++..+++..+. .+..+.+|+++++
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~i------kpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS-- 82 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEAC------SPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS-- 82 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--
Confidence 478999999999999999999999888777 89999999999876654321 3356789998887
Q ss_pred CCcccccccCCCC-CCcccCCCCeEEEEeceeecCcccceeecCcCCC-----CCHHHHHHHHHHHHHHHHHHHccCCCC
Q 009507 304 ANGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGE-----PTAREKECFTRVLQGHIALDQAIFPQS 377 (533)
Q Consensus 304 ~n~a~~hy~p~~~-~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~-----p~~e~~~~y~~vl~~~~~~~~~~~P~G 377 (533)
.|...+||.|... ++++|++||+|.||+|++|+||++|++||+++|+ +++++++++.++..|+.+++++++| |
T Consensus 83 vN~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkP-G 161 (389)
T TIGR00495 83 VNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKP-G 161 (389)
T ss_pred cCCeeeCCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 6888999999642 3489999999999999999999999999999995 4678999999999999999999999 9
Q ss_pred CCcchHHHHHHHHHHHcCCC-CcCccccccccCCcccc-CCCCCCCc-C-----CCCccccCCCEEecCccee
Q 009507 378 TPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHE-GPQSISFR-Y-----GNMTPLVEGMIVSNEPGYY 442 (533)
Q Consensus 378 ~~~~~ld~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE-~P~~i~~~-~-----~~~~~L~~GMv~siEPg~y 442 (533)
++.++|+.++++++.++|+. ..+.+||||| -.+|| +|..+... . .....|++|||++|||.+-
T Consensus 162 ~~~~dI~~ai~~v~~~~G~~~v~~~~gH~ig--r~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs 232 (389)
T TIGR00495 162 NTNTQVTEAINKVAHSYGCTPVEGMLSHQLK--QHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVS 232 (389)
T ss_pred CcHHHHHHHHHHHHHHcCCeecCCceeeccc--ceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeec
Confidence 99999999999999999995 5677999999 67888 67533321 1 1356899999999999653
No 30
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.97 E-value=2.4e-30 Score=271.71 Aligned_cols=196 Identities=15% Similarity=0.128 Sum_probs=168.8
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHh---hCCC-CCCCCCeEEEecCCccc
Q 009507 233 KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---QSGF-LDTSFDTISGSGANGAI 308 (533)
Q Consensus 233 ravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~---~~g~-~~~sf~~i~~~G~n~a~ 308 (533)
+..+|++||+.||+|+.+...++..+..++ ++|+||.||++.++....+ ..|. .+.+|++.+ +.|.+.
T Consensus 150 ~~~~s~~EI~~~R~AaeIa~~vl~~~~~~I------kpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~v--S~N~~a 221 (470)
T PTZ00053 150 LEKLSEEQYQDLRRAAEVHRQVRRYAQSVI------KPGVKLIDICERIESKSRELIEADGLKCGWAFPTGC--SLNHCA 221 (470)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHh------hCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCcee--ecCccc
Confidence 344799999999999999999988777766 8999999999998864322 2344 468999966 478888
Q ss_pred ccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHH
Q 009507 309 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 388 (533)
Q Consensus 309 ~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar 388 (533)
+||.|+..++++|+.||+|.||+|++|+||++|++||+++| +++++++.++.+|+.+++++++| |+++++|+.+++
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kp-Gv~~~dI~~AIq 297 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGI-DVRLSDIGAAIQ 297 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHH
Confidence 99999854568999999999999999999999999999998 58899999999999999999999 999999999999
Q ss_pred HHHHHcCCC----------CcCccccccccCC-ccccCCCCCCCcCCCCccccCCCEEecCccee
Q 009507 389 SSLWKIGLD----------YRHGTGHGVGAAL-NVHEGPQSISFRYGNMTPLVEGMIVSNEPGYY 442 (533)
Q Consensus 389 ~~l~~~G~~----------~~h~~GHGvG~~l-~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y 442 (533)
+++.++|+. +.|.+||||| + .+|++|.......++...|++||||+|||.+-
T Consensus 298 evies~G~e~~Gk~f~~k~I~nltGHgIG--~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~s 360 (470)
T PTZ00053 298 EVIESYEVEIKGKTYPIKSIRNLNGHSIG--PYIIHGGKSVPIVKGGENTRMEEGELFAIETFAS 360 (470)
T ss_pred HHHHHcCCcccCcccccccccCCcccCCC--CccccCCCcCCeeCCCCCCEecCCCEEEEcceee
Confidence 999999973 3799999999 6 79997764443445678999999999999765
No 31
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.97 E-value=3.2e-30 Score=260.90 Aligned_cols=195 Identities=21% Similarity=0.227 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCc
Q 009507 240 ELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCS 319 (533)
Q Consensus 240 EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~ 319 (533)
+|+.||+|+++...++..+++.+ ++|+||.|+++.+++... ..|. +++|++++++|.+ .+||.|++.+++
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i------~pG~se~ei~~~~~~~i~-~~g~-~~afp~~vs~n~~--~~H~~p~~~d~~ 70 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLI------KPGAKLLDVAEFVENRIR-ELGA-KPAFPCNISINEV--AAHYTPSPGDER 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHH-HcCC-ccCCCCEEeeCCC--ccCCCCCCCCCc
Confidence 58999999999999998887666 899999999999988654 3453 6899999887665 469999865568
Q ss_pred ccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-C
Q 009507 320 VVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-Y 398 (533)
Q Consensus 320 ~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~ 398 (533)
+|++||++++|+|++|+||++|++||+++| ++++++++++.+++.+++++++| |+++++|+.++++.+.+.|+. +
T Consensus 71 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikp-G~~~~dv~~~i~~vi~~~G~~~~ 146 (291)
T PRK08671 71 VFPEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRP-GVSVGEIGRVIEETIRSYGFKPI 146 (291)
T ss_pred ccCCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccc
Confidence 999999999999999999999999999999 47889999999999999999999 999999999999999999994 6
Q ss_pred cCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEE
Q 009507 399 RHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIR 450 (533)
Q Consensus 399 ~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~Gir 450 (533)
.|.+|||||.+ .+||+|.......+++.+|++||||++||.+ ..|.+.++
T Consensus 147 ~~~~GHgiG~~-~~he~p~ip~~~~~~~~~le~GmV~aIEp~~-t~G~G~v~ 196 (291)
T PRK08671 147 RNLTGHGLERY-ELHAGPSIPNYDEGGGVKLEEGDVYAIEPFA-TDGEGKVV 196 (291)
T ss_pred CCCcccCcCCC-cccCCCccCccCCCCCceeCCCCEEEEcceE-ECCCCeEe
Confidence 78999999943 7899997433334467899999999999965 46655554
No 32
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.97 E-value=6.1e-30 Score=259.09 Aligned_cols=198 Identities=17% Similarity=0.137 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCC
Q 009507 239 AELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKC 318 (533)
Q Consensus 239 ~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~ 318 (533)
+||+.||+|+++...++..+++++ ++|+||.|+++.++.... ..|. .++|+++++. |...+||.|...++
T Consensus 3 ~~i~~~r~A~~I~~~~~~~~~~~i------~~G~se~el~~~~e~~~~-~~g~-~~aFp~~vs~--n~~~~H~~p~~~d~ 72 (295)
T TIGR00501 3 ERAEKWIEAGKIHSKVRREAADRI------VPGVKLLEVAEFVENRIR-ELGA-EPAFPCNISI--NECAAHFTPKAGDK 72 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC------cCCCCHHHHHHHHHHHHH-HcCC-CCCCCcceec--CCEeeCCCCCCCcC
Confidence 689999999999999999888777 899999999999988654 4454 3799998774 66778999986556
Q ss_pred cccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC-C
Q 009507 319 SVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL-D 397 (533)
Q Consensus 319 ~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~-~ 397 (533)
++|++||++++|+|++|+||++|++||+++|++ ++++|+++.+|+.+++++++| |+++++|+.++++.+.+.|+ .
T Consensus 73 ~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~~---~~~l~~a~~~A~~aai~~~kP-Gv~~~dV~~ai~~vi~~~G~~~ 148 (295)
T TIGR00501 73 TVFKDGDVVKLDLGAHVDGYIADTAITVDLGDQ---YDNLVKAAKDALYTAIKEIRA-GVRVGEIGKAIQEVIESYGVKP 148 (295)
T ss_pred ccCCCCCEEEEEEeEEECCEEEEEEEEEEeCcH---HHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCee
Confidence 899999999999999999999999999999953 689999999999999999999 99999999999999999999 4
Q ss_pred CcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEE
Q 009507 398 YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIE 452 (533)
Q Consensus 398 ~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriE 452 (533)
+.|.+|||+|.| .+|++|......++++.+|++||||++||. +..|.+.++-+
T Consensus 149 i~~~~GHgig~~-~~h~g~~ip~i~~~~~~~le~GmV~aIEP~-~~~G~G~v~~~ 201 (295)
T TIGR00501 149 ISNLTGHSMAPY-RLHGGKSIPNVKERDTTKLEEGDVVAIEPF-ATDGVGYVTDG 201 (295)
T ss_pred ecCCCCcceecc-cccCCCccCeecCCCCCEeCCCCEEEEcee-EECCcCeEecC
Confidence 689999999963 578886532223346788999999999994 56776655443
No 33
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.96 E-value=7.9e-29 Score=250.77 Aligned_cols=195 Identities=18% Similarity=0.150 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcc
Q 009507 241 LEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSV 320 (533)
Q Consensus 241 I~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~ 320 (533)
++.||+|+.+...++.++++.+ ++|+||.|+++.+++... ..|. +++|++.+ +.|...+||.|+..++++
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i------~pG~te~ei~~~~~~~i~-~~G~-~~afp~~i--s~n~~~~H~~p~~~d~~~ 70 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLI------KPGMTLLEIAEFVENRIR-ELGA-GPAFPVNL--SINECAAHYTPNAGDDTV 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHH-HcCC-CCCCCcee--ccCCEeeCCCCCCCCCcc
Confidence 3689999999999999887766 899999999999987644 4453 68898765 467788999998656789
Q ss_pred cCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-Cc
Q 009507 321 VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YR 399 (533)
Q Consensus 321 i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~~ 399 (533)
|++||++.+|+|++|+||++|++||+.+|+ +++++|+++++++.+++++++| |+++++|+.++++.+.++|+. +.
T Consensus 71 l~~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikP-G~~~~dV~~ai~~~i~~~G~~~~~ 146 (291)
T cd01088 71 LKEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGP-DVRLGEIGEAIEEVIESYGFKPIR 146 (291)
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCEEee
Confidence 999999999999999999999999999995 7789999999999999999999 999999999999999999994 67
Q ss_pred CccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEE
Q 009507 400 HGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRI 451 (533)
Q Consensus 400 h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~Giri 451 (533)
|.+|||||. +.+|++|.......+++.+|++||||++||. +..|.+.++-
T Consensus 147 ~~~GHgig~-~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~-~s~G~G~v~~ 196 (291)
T cd01088 147 NLTGHSIER-YRLHAGKSIPNVKGGEGTRLEEGDVYAIEPF-ATTGKGYVHD 196 (291)
T ss_pred cCCccCccC-ccccCCCccCccCCCCCCEeCCCCEEEEcee-EECCCCeeec
Confidence 899999995 2689987633333346788999999999995 5677776654
No 34
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=2.3e-27 Score=227.89 Aligned_cols=225 Identities=16% Similarity=0.154 Sum_probs=196.2
Q ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCC----CCCCeEEEecCCcc
Q 009507 232 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD----TSFDTISGSGANGA 307 (533)
Q Consensus 232 lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~----~sf~~i~~~G~n~a 307 (533)
--.|.++++|++||.|+++....+..+...+ +||+|..||...+.+...+...+-+ -.|+--+++.-|..
T Consensus 113 ~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v------~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEv 186 (369)
T KOG2738|consen 113 EIKILDPEGIEGMRKACRLAREVLDYAATLV------RPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEV 186 (369)
T ss_pred ceeccCHHHHHHHHHHHHHHHHHHHHHhhhc------CCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhhe
Confidence 3457899999999999999988877665555 9999999999999987666555533 37888889999999
Q ss_pred cccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHH
Q 009507 308 IIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 387 (533)
Q Consensus 308 ~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~a 387 (533)
+.|+.|.. |+|+.||++-||+..-++||+.|..+||++|+.+++.+++.+...+++..+++.++| |++..+|..++
T Consensus 187 iCHGIPD~---RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kp-Gv~freiG~iI 262 (369)
T KOG2738|consen 187 ICHGIPDS---RPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKP-GVSFREIGNII 262 (369)
T ss_pred eecCCCCc---CcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHH
Confidence 99999977 999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHcCCC-CcCccccccccCCccccCCCCCCCcCC-CCccccCCCEEecCcceee-----------------cCcce
Q 009507 388 RSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYG-NMTPLVEGMIVSNEPGYYE-----------------DHAFG 448 (533)
Q Consensus 388 r~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~~~-~~~~L~~GMv~siEPg~y~-----------------~g~~G 448 (533)
.+...+.|+. ....+||||| --.|-.|...-+..+ ...++++||+|+|||.+-. +|...
T Consensus 263 ~kha~~~g~sVVr~ycGHGig--~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~s 340 (369)
T KOG2738|consen 263 QKHATKNGYSVVRSYCGHGIG--RVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRS 340 (369)
T ss_pred HHHhhhcCceeehhhhccccc--cccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCcee
Confidence 9999999997 5677899999 447999974444322 3457999999999998864 35567
Q ss_pred EEEEEeEEEeecCCCCCCCCcccccceecccC
Q 009507 449 IRIENLLYVKEVGTPNRFGGVSYLGFEKLTFV 480 (533)
Q Consensus 449 iriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~ 480 (533)
..+|.+++||++ |+|.||..
T Consensus 341 AQFEhTlLVT~t------------G~EILT~r 360 (369)
T KOG2738|consen 341 AQFEHTLLVTET------------GCEILTKR 360 (369)
T ss_pred cceeeEEEEecc------------cceehhcc
Confidence 899999999999 99999964
No 35
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.92 E-value=1.7e-23 Score=221.50 Aligned_cols=336 Identities=20% Similarity=0.256 Sum_probs=247.7
Q ss_pred ccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhh---hc-----CCeE--EeeCc-----cHHHHHHHH
Q 009507 103 AWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHL---KN-----AGVE--LRPYN-----SILSEIKSL 167 (533)
Q Consensus 103 awL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l---~~-----~~v~--v~~y~-----~~~~~l~~l 167 (533)
-||+|+.-.| ..+++.++.+++.+...+.. ..+.. .. ..|. +++-. .+...++.+
T Consensus 21 ~WLlGYEfpd--------Tilv~~~~~i~iltSkkKa~--~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdkii~~i 90 (960)
T KOG1189|consen 21 TWLLGYEFPD--------TILVLCKDKIYILTSKKKAE--FLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDKIIKAI 90 (960)
T ss_pred HHHhccccCc--------eEEEEecCcEEEEecchhHH--HHHhhcccccCcccCcceEEEecccCccccccHHHHHHHH
Confidence 4999886333 46677787777776644432 22111 10 1232 23211 134444555
Q ss_pred HhCCCeEEEeCCC-chHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHH
Q 009507 168 AAQGAQLWLDPSS-VNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLN 246 (533)
Q Consensus 168 ~~~~~~i~~d~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~ 246 (533)
...+++||+-... .+-.+.......+.. .+.+.+|.+..+..+-++|++.||+.+|.
T Consensus 91 k~~gk~vGvf~ke~~~G~F~~~W~~~l~~----------------------~~fn~vDis~~ls~l~avKDd~Ei~~irk 148 (960)
T KOG1189|consen 91 KSAGKKVGVFAKEKFQGEFMESWNKRLEA----------------------GGFNKVDISLGLSKLFAVKDDEEIANIRK 148 (960)
T ss_pred HhcCCeeeeecccccchhHHHHHHHHhhh----------------------cCCceeehhhhhhhheeeccHHHHHHHHH
Confidence 4457889987543 444555555543321 36678898888999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHhccCCCcCHHHHHHHHHHHHHh---hCC----CCCCCCCeEEEecCCcccccccCCCCCC
Q 009507 247 SHLRDAAALAQFW-VWLEEEIHNGAKLTEVDVADKLLEFRSK---QSG----FLDTSFDTISGSGANGAIIHYKPEPGKC 318 (533)
Q Consensus 247 A~~~~~~a~~~~~-~~l~~~i~~~~g~tE~eia~~l~~~r~~---~~g----~~~~sf~~i~~~G~n~a~~hy~p~~~~~ 318 (533)
|+....+.|.+++ ..+...+++...+|...+...++.+... ..| ..+..|++|+.+|.+..+-....+ ++
T Consensus 149 sa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d~cY~PIiqSGg~ydlk~sa~s--~~ 226 (960)
T KOG1189|consen 149 SAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLDMCYPPIIQSGGKYDLKPSAVS--DD 226 (960)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccccccChhhhcCCcccccccccc--cc
Confidence 9999999998554 4566777666678988888888765322 122 235789999999998765322222 23
Q ss_pred cccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC--
Q 009507 319 SVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL-- 396 (533)
Q Consensus 319 ~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~-- 396 (533)
..| + ++++.+|++|++||+.++||+.+. |+.++.+.|+.++.+|.+++..++| |+..++|+..+..++.+.+.
T Consensus 227 ~~L--~-~I~cs~G~RynsYCSNv~RT~Lid-pssemq~nY~fLl~aqe~il~~lrp-G~ki~dVY~~~l~~v~k~~Pel 301 (960)
T KOG1189|consen 227 NHL--H-VILCSLGIRYNSYCSNVSRTYLID-PSSEMQENYEFLLAAQEEILKLLRP-GTKIGDVYEKALDYVEKNKPEL 301 (960)
T ss_pred ccc--c-eEEeeccchhhhhhccccceeeec-chHHHHHHHHHHHHHHHHHHHhhcC-CCchhHHHHHHHHHHHhcCcch
Confidence 566 3 999999999999999999999997 8999999999999999999999999 99999999999999999987
Q ss_pred --CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceee------cCcceEEEEEeEEEeecCCCCCCCC
Q 009507 397 --DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYE------DHAFGIRIENLLYVKEVGTPNRFGG 468 (533)
Q Consensus 397 --~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~------~g~~GiriEd~v~Vt~~~~~~~~~~ 468 (533)
++....|-||| |...|.-..|+.. ++.+|++||||.+.-|+-. .+.|.+-+.|||+|++++
T Consensus 302 ~~~~~k~lG~~iG--lEFREssl~inaK--nd~~lk~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e~~------- 370 (960)
T KOG1189|consen 302 VPNFTKNLGFGIG--LEFRESSLVINAK--NDRVLKKGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGEDP------- 370 (960)
T ss_pred hhhhhhhcccccc--eeeeccccccccc--chhhhccCcEEEEeeccccccCcccccchhhhccceeeecCCC-------
Confidence 45667899999 9999988777654 7899999999999988753 356889999999999982
Q ss_pred cccccceecccCCCCCCccchhcC
Q 009507 469 VSYLGFEKLTFVPIQTKLVDLSLL 492 (533)
Q Consensus 469 ~~~lg~e~LT~~P~~~~li~~~ll 492 (533)
-.+.||.++....-+....-
T Consensus 371 ----p~~vLT~~~K~~~dv~~~f~ 390 (960)
T KOG1189|consen 371 ----PAEVLTDSAKAVKDVSYFFK 390 (960)
T ss_pred ----cchhhcccchhhcccceeec
Confidence 23788887765555554444
No 36
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.73 E-value=1.1e-16 Score=166.87 Aligned_cols=231 Identities=14% Similarity=0.150 Sum_probs=177.1
Q ss_pred CCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhh---------CC
Q 009507 220 PAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---------SG 290 (533)
Q Consensus 220 ~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~---------~g 290 (533)
..++|++.-+..|-++|+..||+++|.+.+...+.|.-+...++..++..-.+|...+...++...-.. .|
T Consensus 155 fN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~ 234 (1001)
T COG5406 155 FNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLG 234 (1001)
T ss_pred cchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCcccc
Confidence 346788888899999999999999999999998888877777766664333466666666665421100 11
Q ss_pred -----CCCCCCCeEEEecCCcccccccCCCC-CCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHH
Q 009507 291 -----FLDTSFDTISGSGANGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQ 364 (533)
Q Consensus 291 -----~~~~sf~~i~~~G~n~a~~hy~p~~~-~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~ 364 (533)
..+..|.+|+.+|..--+ .|+.- .+..+ .||++++.+|.+|+|||+.++||+.+. |+.||++-|..++.
T Consensus 235 ~~~~d~lew~ytpiiqsg~~~Dl---~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~d-p~~e~~~Ny~fl~~ 309 (1001)
T COG5406 235 DIDLDQLEWCYTPIIQSGGSIDL---TPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILTD-PDSEQQKNYEFLYM 309 (1001)
T ss_pred ccchhhhhhhcchhhccCceeec---ccccccCchhh-cCceEEEEeeeeeccccccccceEEeC-CchHhhhhHHHHHH
Confidence 124678899999876433 33322 12555 578999999999999999999999997 89999999999999
Q ss_pred HHHHHHHccCCCCCCcchHHHHHHHHHHHcCC----CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcc
Q 009507 365 GHIALDQAIFPQSTPGFVLDAFARSSLWKIGL----DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPG 440 (533)
Q Consensus 365 ~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~----~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg 440 (533)
++..+...++| |+...+|+..+.+++.+.|. +|....|-++| +...+.-..++.. ++.+|+.||+|.+.-|
T Consensus 310 lQk~i~~~~rp-G~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~ig--iefR~s~~~~nvk--n~r~lq~g~~fnis~g 384 (1001)
T COG5406 310 LQKYILGLVRP-GTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIG--IEFRSSQKPFNVK--NGRVLQAGCIFNISLG 384 (1001)
T ss_pred HHHHHHhhcCC-CCCchhHHHHHHHHHHhcCCccCchHhhhhhhhcc--ccccccccceecc--CCceeccccEEEEeec
Confidence 99999999999 99999999999999999887 45667899999 8777755434433 6789999999999887
Q ss_pred eee------cCcceEEEEEeEEEeec
Q 009507 441 YYE------DHAFGIRIENLLYVKEV 460 (533)
Q Consensus 441 ~y~------~g~~GiriEd~v~Vt~~ 460 (533)
+-. .+.|.+.+-|++-|+-+
T Consensus 385 f~nl~~~~~~Nnyal~l~dt~qi~ls 410 (1001)
T COG5406 385 FGNLINPHPKNNYALLLIDTEQISLS 410 (1001)
T ss_pred ccccCCCCcccchhhhhccceEeecC
Confidence 643 24566666666666555
No 37
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.41 E-value=2.4e-13 Score=120.78 Aligned_cols=128 Identities=23% Similarity=0.374 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhhhcCCeEEeeC
Q 009507 78 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVELRPY 157 (533)
Q Consensus 78 Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l~~~~v~v~~y 157 (533)
|++++|+.|+++|+|++|+++++|++||||++.. ....| .+++++.++.+||++.........+. ....++..|
T Consensus 1 Rl~rl~~~m~~~gid~lll~~~~ni~YltG~~~~-~~~~~---~~l~i~~~~~~l~~~~~~~~~~~~~~--~~~~~v~~~ 74 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLTSPENIRYLTGFRWQ-PGERP---VLLVITADGAVLFVPKGEYERAAEES--APDDEVVEY 74 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEESHHHHHHHHS--ST--TSSE---EEEEEESSSEEEEEEGGGHHHHHHHH--TTSSEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEcChhhceEecCCCcC-CCcce---EEEEecccCcEEEeccccHHHHHHhh--cCCceEEEE
Confidence 7899999999999999999999999999999722 11122 34448888889999854443333332 134566766
Q ss_pred cc----HHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchhh
Q 009507 158 NS----ILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSK 233 (533)
Q Consensus 158 ~~----~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lr 233 (533)
.+ +.+.|+++....++||+|.+.+++..++.|++.+ |+.+++++++++..+|
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~~------------------------~~~~~v~~~~~i~~~R 130 (132)
T PF01321_consen 75 EDPYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQEAL------------------------PGAEFVDASPLIEELR 130 (132)
T ss_dssp STHHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHHHS------------------------TTSEEEEEHHHHHHHH
T ss_pred ecccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHHhC------------------------CCCEEEEcHHHHHHcC
Confidence 55 4556666654568999999999999999998864 4678999999999999
Q ss_pred cc
Q 009507 234 AV 235 (533)
Q Consensus 234 av 235 (533)
+|
T Consensus 131 ~I 132 (132)
T PF01321_consen 131 MI 132 (132)
T ss_dssp TS
T ss_pred cC
Confidence 86
No 38
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.26 E-value=8.1e-11 Score=114.28 Aligned_cols=181 Identities=18% Similarity=0.200 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHH-H---HhhCCCCCCCCCeEEEecCCcccccccCCCCCCcccCCCC
Q 009507 250 RDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEF-R---SKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKK 325 (533)
Q Consensus 250 ~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~-r---~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd 325 (533)
+++.|+.++...+...+ +||||-.||++.++.. | .+..-..+..|||-++- |.+-.||+|+.....+|+.+|
T Consensus 90 raAE~HRqvR~yv~s~i--kPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~Sl--N~cAAHyTpNaGd~tVLqydD 165 (397)
T KOG2775|consen 90 RAAEAHRQVRKYVQSII--KPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCSL--NHCAAHYTPNAGDKTVLKYDD 165 (397)
T ss_pred HHHHHHHHHHHHHHHhc--cCcccHHHHHHHHHHHHHHHHHhccccccccCCCcccc--cchhhhcCCCCCCceeeeecc
Confidence 33455666666665556 9999999999999863 2 22222346889887664 555679999988778999999
Q ss_pred eEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC--------
Q 009507 326 LFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-------- 397 (533)
Q Consensus 326 ~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-------- 397 (533)
+..||+|.+.+|-.-|.+.|+.|.+ ....+..+|.+|....+...-- .++..+|.+++++++.++-..
T Consensus 166 V~KiDfGthi~GrIiDsAFTv~F~p---~~d~Ll~AvreaT~tGIkeaGi-DvRlcdiG~aiqEVmeSyEvEi~Gk~~~V 241 (397)
T KOG2775|consen 166 VMKIDFGTHIDGRIIDSAFTVAFNP---KYDPLLAAVREATNTGIKEAGI-DVRLCDIGEAIQEVMESYEVEINGKTYQV 241 (397)
T ss_pred eEEEeccccccCeEeeeeeEEeeCc---cccHHHHHHHHHHhhhhhhcCc-eeeehhhhHHHHHHhhheEEEeCCceecc
Confidence 9999999999999999999999963 3446777888888888877665 688999999999999987541
Q ss_pred --CcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCc
Q 009507 398 --YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEP 439 (533)
Q Consensus 398 --~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEP 439 (533)
.+.-.||+|+.| .+|-+-.....+.+..+.+++|.+++||.
T Consensus 242 KpIrnLnGHSI~~y-rIH~gksVPiVkgge~trmee~e~yAIET 284 (397)
T KOG2775|consen 242 KPIRNLNGHSIAQY-RIHGGKSVPIVKGGEQTRMEEGEIYAIET 284 (397)
T ss_pred eeccccCCCcccce-EeecCcccceecCCcceeecCCeeEEEEe
Confidence 234469999987 57877542223334678899999999995
No 39
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.20 E-value=1.6e-09 Score=108.16 Aligned_cols=158 Identities=11% Similarity=0.052 Sum_probs=128.4
Q ss_pred chhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHh---------hCCCCCCCCCeEE
Q 009507 230 AFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---------QSGFLDTSFDTIS 300 (533)
Q Consensus 230 ~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~---------~~g~~~~sf~~i~ 300 (533)
..=..+-++.-+..+|.|+.+...++..+.+.+ .+|.+-.|++..-+.+..+ ..-..|..|||-+
T Consensus 10 ~~d~tia~~~vvtKYk~AgeI~n~~lk~V~~~~------~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~I 83 (398)
T KOG2776|consen 10 EKDKTIANDSVVTKYKMAGEIVNKVLKSVVELC------QPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSI 83 (398)
T ss_pred ccccccccHHHHhhhhhHHHHHHHHHHHHHHHh------cCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhcccccccee
Confidence 344567788889999999999999998888776 8999999999887655332 2334578999977
Q ss_pred EecCCcccccccCCCCC-CcccCCCCeEEEEeceeecCcccceeecCcCCCCC-----HHHHHHHHHHHHHHHHHHHccC
Q 009507 301 GSGANGAIIHYKPEPGK-CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPT-----AREKECFTRVLQGHIALDQAIF 374 (533)
Q Consensus 301 ~~G~n~a~~hy~p~~~~-~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~-----~e~~~~y~~vl~~~~~~~~~~~ 374 (533)
+ .|-...||.|.... +..|++||++.||+|++.+||++-++.|+++|+++ ....++..++..|..++++.++
T Consensus 84 s--vnncv~h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllk 161 (398)
T KOG2776|consen 84 S--VNNCVCHFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLK 161 (398)
T ss_pred c--ccceeeccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhC
Confidence 6 57778999998654 68999999999999999999999999999998643 3445666666777788899999
Q ss_pred CCCCCcchHHHHHHHHHHHcCC
Q 009507 375 PQSTPGFVLDAFARSSLWKIGL 396 (533)
Q Consensus 375 P~G~~~~~ld~~ar~~l~~~G~ 396 (533)
| |.+-.+|-.+..+...+.|+
T Consensus 162 p-gn~n~~vT~~i~k~aas~~c 182 (398)
T KOG2776|consen 162 P-GNTNTQVTRAIVKTAASYGC 182 (398)
T ss_pred C-CCCCchhhHHHHHHHHHhCC
Confidence 9 99988988888888777765
No 40
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=97.41 E-value=0.00041 Score=74.52 Aligned_cols=106 Identities=17% Similarity=0.267 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHcCCCEEEEccCCc------------cccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHh
Q 009507 78 KLSSLRSDLVDAGSSAIVISMLDE------------IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMD 145 (533)
Q Consensus 78 Ki~~lr~~m~~~g~dallls~~d~------------IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~ 145 (533)
++.++|+.|++.+++|.|+.+-|. .+|++||.|+. ++++|+..++.||+|.+ +-.++..
T Consensus 11 ~~~~~~~~~~~~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsa--------g~Avit~~~a~lwtD~R-Y~~QA~~ 81 (606)
T KOG2413|consen 11 ELMRLRELMKSPPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSA--------GTAVITEEEAALWTDGR-YFQQAEQ 81 (606)
T ss_pred HHHHHHHHhcCCCceEEEccCCchhhhhhhcchhhhhhhhcccCCCc--------ceEEEecCcceEEEccH-HHHHHHh
Confidence 678999999999999999998875 78999999985 89999999999999964 4446667
Q ss_pred hhhcCCeEE-eeCc---cHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHH
Q 009507 146 HLKNAGVEL-RPYN---SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAI 193 (533)
Q Consensus 146 ~l~~~~v~v-~~y~---~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~ 193 (533)
+++. +.++ +... .+.+.|.+....+++||+|+.-+++..+..+.+.+
T Consensus 82 qld~-~W~l~k~~~~~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~~~l 132 (606)
T KOG2413|consen 82 QLDS-NWTLMKMGEDVPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSL 132 (606)
T ss_pred hhcc-cceeeeccCCCccHHHHHHHhCCCccccccCcceechhHHHhHHHHH
Confidence 7764 3443 2332 46788888777788999999999998888887654
No 41
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.93 E-value=0.0033 Score=66.49 Aligned_cols=113 Identities=19% Similarity=0.176 Sum_probs=79.5
Q ss_pred cccceeecCcCCCCC--HHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCC-c---CccccccccCCc
Q 009507 338 GTTDITRTVHFGEPT--AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY-R---HGTGHGVGAALN 411 (533)
Q Consensus 338 y~tDitRT~~~G~p~--~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~-~---h~~GHGvG~~l~ 411 (533)
..+++.|+..+..|. +.+|++.+.+.+++.++.++++| |++-.+|+.++++.+.+.|... . ++..-++. .+
T Consensus 127 ~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irp-GvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svc--ts 203 (396)
T PLN03158 127 PNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKP-GVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCC--TS 203 (396)
T ss_pred cccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCceee--ec
Confidence 356777888887655 55678888889999999999999 9999999999999988887421 1 11111111 11
Q ss_pred ccc-CCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEe
Q 009507 412 VHE-GPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 458 (533)
Q Consensus 412 vhE-~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt 458 (533)
+.+ -+..+ + ++.+|++|+++.++.|.+..|.++ -+..+++|.
T Consensus 204 ~N~~i~Hgi---p-~~r~L~~GDiV~iDvg~~~~GY~a-D~tRT~~VG 246 (396)
T PLN03158 204 VNEVICHGI---P-DARKLEDGDIVNVDVTVYYKGCHG-DLNETFFVG 246 (396)
T ss_pred ccccccCCC---C-CCccCCCCCEEEEEEeEEECCEEE-eEEeEEEcC
Confidence 112 11111 1 457899999999999999887554 788888874
No 42
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.65 E-value=0.011 Score=57.93 Aligned_cols=99 Identities=22% Similarity=0.115 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-CcC---ccccccccCCcccc-CCCCCCCcCCCCc
Q 009507 353 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH---GTGHGVGAALNVHE-GPQSISFRYGNMT 427 (533)
Q Consensus 353 ~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~~h---~~GHGvG~~l~vhE-~P~~i~~~~~~~~ 427 (533)
+.+|++...+.+++.++.++++| |++-.+|..++++.+++.|.. +.+ +....+. .+... .|... + ++.
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~p-G~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~--~~~~~~~~h~~---~-~~~ 74 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKP-GVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSIC--TSVNEVVCHGI---P-DDR 74 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCcccccCCCCCccee--cCCCCceeCCC---C-CCc
Confidence 45789999999999999999999 999999999999999999873 111 1001111 11111 11111 1 457
Q ss_pred cccCCCEEecCcceeecCcceEEEEEeEEEee
Q 009507 428 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 459 (533)
Q Consensus 428 ~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~ 459 (533)
+|++|+++.+++|....| |...+..++++.+
T Consensus 75 ~l~~Gd~v~id~g~~~~G-Y~ad~~RT~~~G~ 105 (238)
T cd01086 75 VLKDGDIVNIDVGVELDG-YHGDSARTFIVGE 105 (238)
T ss_pred ccCCCCEEEEEEEEEECC-EEEEEEEEEECCC
Confidence 899999999999986665 4558888888743
No 43
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.22 E-value=0.03 Score=56.99 Aligned_cols=85 Identities=19% Similarity=0.165 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCccccccccCCcccc-CCCCCCCcCCCCccccC
Q 009507 353 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHE-GPQSISFRYGNMTPLVE 431 (533)
Q Consensus 353 ~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~L~~ 431 (533)
+..+++-..+.+++.++.+.++| |++..||...+++.+.+.|......+ + +++++ .+. ..+..+++..|++
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~p-G~te~ei~~~~~~~i~~~G~~~afp~----~--is~n~~~~H-~~p~~~d~~~l~~ 73 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKP-GMTLLEIAEFVENRIRELGAGPAFPV----N--LSINECAAH-YTPNAGDDTVLKE 73 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHcCCCCCCCc----e--eccCCEeeC-CCCCCCCCcccCC
Confidence 35788889999999999999999 99999999999999999885432222 2 22222 111 1111224578999
Q ss_pred CCEEecCcceeecC
Q 009507 432 GMIVSNEPGYYEDH 445 (533)
Q Consensus 432 GMv~siEPg~y~~g 445 (533)
|+++.++.|....|
T Consensus 74 GDvV~iD~G~~~dG 87 (291)
T cd01088 74 GDVVKLDFGAHVDG 87 (291)
T ss_pred CCEEEEEEEEEECC
Confidence 99999999987766
No 44
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=95.86 E-value=0.032 Score=55.17 Aligned_cols=90 Identities=20% Similarity=0.142 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc----CccccccccCCccccCCCCCCCcCCCCccc
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHEGPQSISFRYGNMTPL 429 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~----h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L 429 (533)
..|++-+.+.+++..+...++| |++..+|+.++++.+.+.|..-. ++..-.+. +++.|--. ..-|+++.+|
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~p-Gvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~c--iSvNe~v~--HgiP~d~~vl 87 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKP-GVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTC--ISVNEVVA--HGIPGDKKVL 87 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHcCceehhccCcCCCcceE--eehhheee--ecCCCCCccc
Confidence 4466777778888899999999 99999999999999998765211 11222222 33333110 0112256789
Q ss_pred cCCCEEecCcceeecCcce
Q 009507 430 VEGMIVSNEPGYYEDHAFG 448 (533)
Q Consensus 430 ~~GMv~siEPg~y~~g~~G 448 (533)
++|.++.+.-|++.+|.+|
T Consensus 88 k~GDiv~IDvg~~~dG~~~ 106 (255)
T COG0024 88 KEGDIVKIDVGAHIDGYIG 106 (255)
T ss_pred CCCCEEEEEEEEEECCeee
Confidence 9999999999999988765
No 45
>PRK05716 methionine aminopeptidase; Validated
Probab=95.76 E-value=0.064 Score=53.10 Aligned_cols=95 Identities=15% Similarity=0.004 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCC--cCccccc----cccCCccccCCCCCCCcCCCCc
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY--RHGTGHG----VGAALNVHEGPQSISFRYGNMT 427 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~--~h~~GHG----vG~~l~vhE~P~~i~~~~~~~~ 427 (533)
.+|++.+.+.+++.++.++++| |++-.+|+.++++.+++.|... .+..++. .| .+ .-.|. .. .++.
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~p-G~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g--~~-~~~~h---~~-~~~~ 84 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKP-GVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTS--VN-EVVCH---GI-PSDK 84 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEec--cc-ceeec---CC-CCCc
Confidence 4568888889999999999999 9999999999999999988631 1111111 11 11 00111 11 1557
Q ss_pred cccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 428 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 428 ~L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|++||++.++.|....| |..-+..+++|
T Consensus 85 ~l~~Gd~v~id~g~~~~g-Y~~d~~RT~~v 113 (252)
T PRK05716 85 VLKEGDIVNIDVTVIKDG-YHGDTSRTFGV 113 (252)
T ss_pred ccCCCCEEEEEEEEEECC-EEEEeEEEEEC
Confidence 899999999999987644 45556666655
No 46
>PRK12896 methionine aminopeptidase; Reviewed
Probab=95.19 E-value=0.093 Score=52.04 Aligned_cols=106 Identities=18% Similarity=0.156 Sum_probs=69.7
Q ss_pred eecCcCCCCCH--HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCC-cC---cc--ccccccCCcccc
Q 009507 343 TRTVHFGEPTA--REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY-RH---GT--GHGVGAALNVHE 414 (533)
Q Consensus 343 tRT~~~G~p~~--e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~-~h---~~--GHGvG~~l~vhE 414 (533)
.|++.+-.+.+ ..|++...+.+++.++.+.++| |++-.+|...++..+.+.|... .+ +. .-..| .+ ..
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~~ 80 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEP-GMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCIS--VN-EE 80 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEec--CC-Ce
Confidence 57777755443 4567778888888889999999 9999999999999999988631 11 11 11122 11 11
Q ss_pred CCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 415 GPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 415 ~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
.++.. + ++.+|++|.++.++.|....| |..-+.-++++
T Consensus 81 ~~h~~---p-~~~~l~~Gd~v~iD~g~~~~g-Y~aD~~RT~~v 118 (255)
T PRK12896 81 VAHGI---P-GPRVIKDGDLVNIDVSAYLDG-YHGDTGITFAV 118 (255)
T ss_pred eEecC---C-CCccCCCCCEEEEEEeEEECc-EEEeeEEEEEC
Confidence 11111 1 446899999999999986655 44445555554
No 47
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.40 E-value=0.27 Score=49.02 Aligned_cols=100 Identities=15% Similarity=0.097 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCccccc---cccCCccccCCC-CCCCcCCCCccc
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHG---VGAALNVHEGPQ-SISFRYGNMTPL 429 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~~GHG---vG~~l~vhE~P~-~i~~~~~~~~~L 429 (533)
.+|++..+..+.++.+..+++| |+|..+||.++.+..-+.|.+ +...|.+ =.-+-+|.|--. +| | +..+|
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~P-gvTTdEiD~~VH~a~Ierg~Y-PSPLnYy~FPKS~CTSVNEviCHGI---P-D~RpL 197 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRP-GVTTDEIDRAVHNAIIERGAY-PSPLNYYGFPKSVCTSVNEVICHGI---P-DSRPL 197 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCC-CccHHHHHHHHHHHHHhcCCc-CCCcccCCCchhhhcchhheeecCC---C-CcCcC
Confidence 3466777778888999999999 999999999999888877742 1111111 000123333110 01 1 56789
Q ss_pred cCCCEEecCcceeecCcceEEEEEeEEEeec
Q 009507 430 VEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 460 (533)
Q Consensus 430 ~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~ 460 (533)
+.|.++.|.-.+|..|..|= +..+++|.+-
T Consensus 198 edGDIvNiDVtvY~~GyHGD-lneTffvG~V 227 (369)
T KOG2738|consen 198 EDGDIVNIDVTVYLNGYHGD-LNETFFVGNV 227 (369)
T ss_pred CCCCEEeEEEEEEeccccCc-cccceEeecc
Confidence 99999999999999887662 4456666553
No 48
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=92.74 E-value=0.32 Score=43.50 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=57.0
Q ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEccC----------------CccccccCcccCCCCCCcceeEEEEE-ec--CceEE
Q 009507 72 GLDVASKLSSLRSDLVDAGSSAIVISML----------------DEIAWLLNLRGSDVPHSPVMYAYLIV-EM--DRAKL 132 (533)
Q Consensus 72 g~~~~~Ki~~lr~~m~~~g~dallls~~----------------d~IawL~n~rg~di~~~Pv~~s~liv-~~--~~~~L 132 (533)
.+.+.+|+++|.+.|.+. .++||.+. .|+.||||+.-.| +++++ .. ++.+|
T Consensus 3 ~~~~~~RR~~l~~~l~~~--~~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~--------~~lvl~~~~~~~~~L 72 (134)
T PF05195_consen 3 AEEYAERRKKLAEKLPDN--SIVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPD--------AVLVLKDGESGKSTL 72 (134)
T ss_dssp HHHHHHHHHHHHHHSHSS--EEEEEE----EEEETTEEE-----HHHHHHH---STT---------EEEEEECTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCC--cEEEEECCCeeeecCCCccccccCCcEEEEeCCCCCC--------EEEEEecCCCCeEEE
Confidence 357899999999999872 23444332 2478999976444 67777 33 37889
Q ss_pred EEeCCCCCHH--------HHhhhhcCCe-EEeeCccHHHHHHHHHhCCCeEEEeC
Q 009507 133 FVDDSKVTPD--------VMDHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDP 178 (533)
Q Consensus 133 fv~~~~~~~~--------~~~~l~~~~v-~v~~y~~~~~~l~~l~~~~~~i~~d~ 178 (533)
|+++.....+ ..+.....|| ++.+.+++.+.|.++.....++..+.
T Consensus 73 F~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~~~~~~~~~~ 127 (134)
T PF05195_consen 73 FVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLKRSRTVYYDL 127 (134)
T ss_dssp EE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHTTTSCEEE-T
T ss_pred EeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHcCCCEEEEEC
Confidence 9975332211 1122222466 88889999999999876666677664
No 49
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=91.75 E-value=1.3 Score=46.89 Aligned_cols=102 Identities=13% Similarity=-0.010 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC-CCcC--ccccccccC--Ccccc-CCCCCCCcCC-CCc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL-DYRH--GTGHGVGAA--LNVHE-GPQSISFRYG-NMT 427 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~-~~~h--~~GHGvG~~--l~vhE-~P~~i~~~~~-~~~ 427 (533)
.|++-..+.+++..+.+.++| |++..+|+..+.+.+++.+- -|.. ...+|+++. +++.+ -++.+ +.++ ++.
T Consensus 22 ~r~Aa~Ia~~~l~~~~~~ikp-G~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~-P~~~d~~~ 99 (389)
T TIGR00495 22 YKMAGEIANNVLKSVVEACSP-GAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFS-PLKSDQDY 99 (389)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCC-CCCCCCCc
Confidence 456666777788889999999 99999999999888887542 1211 112333311 22211 11111 1111 246
Q ss_pred cccCCCEEecCcceeecCcceEEEEEeEEEee
Q 009507 428 PLVEGMIVSNEPGYYEDHAFGIRIENLLYVKE 459 (533)
Q Consensus 428 ~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~ 459 (533)
.|++|.++.+.-|....| |..-+..|++|.+
T Consensus 100 ~Lk~GDvVkIDlG~~idG-Y~aD~arTv~vG~ 130 (389)
T TIGR00495 100 ILKEGDVVKIDLGCHIDG-FIALVAHTFVVGV 130 (389)
T ss_pred CcCCCCEEEEEEEEEECC-EEEEEEEEEEECC
Confidence 899999999999998877 5566778888753
No 50
>PRK08671 methionine aminopeptidase; Provisional
Probab=91.08 E-value=2.2 Score=43.40 Aligned_cols=94 Identities=14% Similarity=0.147 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCCCCCcCCCCccccC
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVE 431 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~--~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~ 431 (533)
..+++-..+.+++..+.+.++| |++-.||...+.+.+.+.|.. |+... ++|.. ..|-.|. ++++.+|++
T Consensus 4 ~~r~A~~I~~~~~~~~~~~i~p-G~se~ei~~~~~~~i~~~g~~~afp~~v--s~n~~-~~H~~p~-----~~d~~~l~~ 74 (291)
T PRK08671 4 KYLEAGKIASKVREEAAKLIKP-GAKLLDVAEFVENRIRELGAKPAFPCNI--SINEV-AAHYTPS-----PGDERVFPE 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCccCCCCEE--eeCCC-ccCCCCC-----CCCCcccCC
Confidence 4677888888899999999999 999999999999999988753 32211 22311 1233332 124568999
Q ss_pred CCEEecCcceeecCcceEEEEEeEEE
Q 009507 432 GMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 432 GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
|.++.++.|....| |-.-+..|+++
T Consensus 75 GDvV~iD~G~~~dG-Y~aD~arT~~v 99 (291)
T PRK08671 75 GDVVKLDLGAHVDG-YIADTAVTVDL 99 (291)
T ss_pred CCEEEEEEeEEECC-EEEEEEEEEEe
Confidence 99999999987766 34444455554
No 51
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=90.68 E-value=2.2 Score=43.51 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCCCCCcCCCCccccC
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVE 431 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~--~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~ 431 (533)
..|++-+.+.+++..+.+.++| |++-.||.......+.+.|.. |+... +++.. ..|-.|. ++++..|++
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~-G~se~el~~~~e~~~~~~g~~~aFp~~v--s~n~~-~~H~~p~-----~~d~~~l~~ 77 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVP-GVKLLEVAEFVENRIRELGAEPAFPCNI--SINEC-AAHFTPK-----AGDKTVFKD 77 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCcce--ecCCE-eeCCCCC-----CCcCccCCC
Confidence 4567777778888889999999 999999999999999998864 32221 12211 1233332 124568999
Q ss_pred CCEEecCcceeecCcceEEEEEeEEE
Q 009507 432 GMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 432 GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
|.++.++.|....| |-.-+.-|+.+
T Consensus 78 GDvV~iD~G~~~dG-Y~aD~arT~~v 102 (295)
T TIGR00501 78 GDVVKLDLGAHVDG-YIADTAITVDL 102 (295)
T ss_pred CCEEEEEEeEEECC-EEEEEEEEEEe
Confidence 99999999988776 44555556555
No 52
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=90.43 E-value=1.8 Score=41.13 Aligned_cols=96 Identities=18% Similarity=0.041 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCcCCCCccccCC
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 432 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~G 432 (533)
..|++...+.+++.++.+.++| |++-.||...+++.+.+.|.. +.+.+--+.| .+ ...|. ..+ ++.+|++|
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g--~~-~~~~h---~~~-~~~~l~~g 74 (208)
T cd01092 3 LLRKAARIADKAFEELLEFIKP-GMTEREVAAELEYFMRKLGAEGPSFDTIVASG--PN-SALPH---GVP-SDRKIEEG 74 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCCcEEEEC--cc-ccccC---CCC-CCcCcCCC
Confidence 4678888888999999999999 999999999999999988874 3333322333 11 11122 111 45679999
Q ss_pred CEEecCcceeecCcceEEEEEeEEEe
Q 009507 433 MIVSNEPGYYEDHAFGIRIENLLYVK 458 (533)
Q Consensus 433 Mv~siEPg~y~~g~~GiriEd~v~Vt 458 (533)
.++.++.|....| |-.-+..++++.
T Consensus 75 d~v~id~g~~~~g-y~~d~~RT~~~g 99 (208)
T cd01092 75 DLVLIDFGAIYDG-YCSDITRTVAVG 99 (208)
T ss_pred CEEEEEeeeeECC-EeccceeEEECC
Confidence 9999998875443 444455666654
No 53
>PRK12897 methionine aminopeptidase; Reviewed
Probab=90.33 E-value=2.1 Score=42.34 Aligned_cols=91 Identities=18% Similarity=0.048 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCC-----cCc-cccccc--cCCccccCCCCCCCcCCCCc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY-----RHG-TGHGVG--AALNVHEGPQSISFRYGNMT 427 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~-----~h~-~GHGvG--~~l~vhE~P~~i~~~~~~~~ 427 (533)
|++-..+.+++.++.+.++| |++-.+|.......+++.|... ... +....| .. ..|-.| ++.
T Consensus 14 r~A~~i~~~~~~~~~~~~~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~-~~H~~p--------~~~ 83 (248)
T PRK12897 14 HESGKLLASCHREIAKIMKP-GITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDE-MCHAFP--------ADV 83 (248)
T ss_pred HHHHHHHHHHHHHHHhhcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCE-eecCCC--------CCc
Confidence 56667777788888999999 9999999999999999988642 110 011112 00 012222 456
Q ss_pred cccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 428 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 428 ~L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|++|.++.++-|.-..| |..-+..++.|
T Consensus 84 ~l~~Gd~V~iD~g~~~~G-Y~sD~tRT~~v 112 (248)
T PRK12897 84 PLTEGDIVTIDMVVNLNG-GLSDSAWTYRV 112 (248)
T ss_pred ccCCCCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 799999999998764443 33445555544
No 54
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=89.41 E-value=3.3 Score=40.65 Aligned_cols=94 Identities=17% Similarity=0.088 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCccccccccCCccc-cCCCCCCCcCCCCccccCC
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVH-EGPQSISFRYGNMTPLVEG 432 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~~GHGvG~~l~vh-E~P~~i~~~~~~~~~L~~G 432 (533)
..|++...+.+++.++.+.++| |++-.+|...++..+.+.|... ..+.-|+ .+.+ ..|.. .+ ++.+|++|
T Consensus 3 ~lr~A~~i~~~~~~~~~~~i~p-G~tE~ei~~~~~~~~~~~G~~~--~~~~~v~--~g~~~~~~H~---~~-~~~~l~~G 73 (243)
T cd01087 3 LMRKACDISAEAHRAAMKASRP-GMSEYELEAEFEYEFRSRGARL--AYSYIVA--AGSNAAILHY---VH-NDQPLKDG 73 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCCc--CCCCeEE--ECCCccccCC---Cc-CCCcCCCC
Confidence 4678888999999999999999 9999999999999999988751 1112222 1111 11221 11 45689999
Q ss_pred CEEecCcceeecCcceEEEEEeEEE
Q 009507 433 MIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 433 Mv~siEPg~y~~g~~GiriEd~v~V 457 (533)
.++.++.|....| |-.-+..++.|
T Consensus 74 d~v~vD~g~~~~G-Y~ad~~Rt~~v 97 (243)
T cd01087 74 DLVLIDAGAEYGG-YASDITRTFPV 97 (243)
T ss_pred CEEEEEeCceECC-EeeeeeEEEEe
Confidence 9999998875544 33444555554
No 55
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=89.16 E-value=2.3 Score=40.42 Aligned_cols=94 Identities=19% Similarity=0.147 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHH-HHHcCCC-CcCccccccccCCccccC-CCCCCCcCCCCcccc
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSS-LWKIGLD-YRHGTGHGVGAALNVHEG-PQSISFRYGNMTPLV 430 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~-l~~~G~~-~~h~~GHGvG~~l~vhE~-P~~i~~~~~~~~~L~ 430 (533)
..|++...+.+++.++.+.++| |++-.+|...+.+. +.+.|.. ..+.+-=+.| .+.. |. +.+ ++..|+
T Consensus 2 ~~R~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g----~~~~~~~---~~~-~~~~l~ 72 (207)
T PF00557_consen 2 CMRKAARIADAAMEAAMEALRP-GMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSG----PNTDLPH---YTP-TDRRLQ 72 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHST-TCBHHHHHHHHHHHHHHHTTTTEESSESEEEEC----CCCGETT---TBC-CSSBES
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHHcCCCcccCCceEecC----Ccceecc---eec-cceeee
Confidence 4688889999999999999999 99999999999987 6777742 2222111122 1111 22 112 467799
Q ss_pred CCCEEecCcceeecCcceEEEEEeEEE
Q 009507 431 EGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 431 ~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|+++.++-+.-..| |-.-+..++++
T Consensus 73 ~gd~v~id~~~~~~g-y~~d~~Rt~~~ 98 (207)
T PF00557_consen 73 EGDIVIIDFGPRYDG-YHADIARTFVV 98 (207)
T ss_dssp TTEEEEEEEEEEETT-EEEEEEEEEES
T ss_pred cCCcceeeccceeee-eEeeeeeEEEE
Confidence 999999998765554 34445555543
No 56
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=88.41 E-value=3.8 Score=44.36 Aligned_cols=97 Identities=14% Similarity=0.036 Sum_probs=56.8
Q ss_pred CCHHHH----HHHHHHHHHHHHHHHccCCCCCCcchHHHHHHH----HHHHcCCC----CcCccccccccCCccccCCCC
Q 009507 351 PTAREK----ECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS----SLWKIGLD----YRHGTGHGVGAALNVHEGPQS 418 (533)
Q Consensus 351 p~~e~~----~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~----~l~~~G~~----~~h~~GHGvG~~l~vhE~P~~ 418 (533)
.++++. ++-..+.+++..+...++| |++..+|...... .+.+.|.. |+. +=++++. ..|-.|.
T Consensus 153 ~s~~EI~~~R~AaeIa~~vl~~~~~~Ikp-G~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt--~vS~N~~-aaH~tP~- 227 (470)
T PTZ00053 153 LSEEQYQDLRRAAEVHRQVRRYAQSVIKP-GVKLIDICERIESKSRELIEADGLKCGWAFPT--GCSLNHC-AAHYTPN- 227 (470)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHHHHHhcCCcccCCCCc--eeecCcc-ccCCCCC-
Confidence 355554 4444555566677888999 9998888775544 44444542 322 2122221 1233332
Q ss_pred CCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 419 ISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 419 i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
++++.+|+.|.++.+.-|....|. -+=+.-|+++
T Consensus 228 ----~gd~~vLk~GDvVkID~G~~vdGY-iaD~ArTv~v 261 (470)
T PTZ00053 228 ----TGDKTVLTYDDVCKLDFGTHVNGR-IIDCAFTVAF 261 (470)
T ss_pred ----CCCCcEecCCCeEEEEEeEEECCE-EEeEEEEEEe
Confidence 224678999999999999887764 3333444444
No 57
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=88.06 E-value=3.8 Score=39.98 Aligned_cols=95 Identities=14% Similarity=0.053 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC---CCcCcccc----ccccCCccccCCCCCCCcCCCC
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL---DYRHGTGH----GVGAALNVHEGPQSISFRYGNM 426 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~---~~~h~~GH----GvG~~l~vhE~P~~i~~~~~~~ 426 (533)
..|++-..+-+++.++.+.++| |++-.||.+.+...+.+.|- .+.+..+. ..| .+ ...|... .++
T Consensus 3 ~ir~Aa~i~d~~~~~~~~~i~p-G~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G--~~-~~~~H~~----~~~ 74 (228)
T cd01090 3 LIRHGARIADIGGAAVVEAIRE-GVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSG--IN-TDGAHNP----VTN 74 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEee--cc-ccccCCC----CCC
Confidence 4678888899999999999999 99999999999999988773 22221110 122 11 1122211 155
Q ss_pred ccccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 427 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 427 ~~L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
..|++|.++.++.+....| |-.-++.|++|
T Consensus 75 r~l~~GD~v~~d~g~~~~G-Y~ad~~RT~~v 104 (228)
T cd01090 75 RKVQRGDILSLNCFPMIAG-YYTALERTLFL 104 (228)
T ss_pred cccCCCCEEEEEEeEEECC-EeeeeEEEEEC
Confidence 7899999999998865554 34445555554
No 58
>PRK07281 methionine aminopeptidase; Reviewed
Probab=87.95 E-value=3.3 Score=42.01 Aligned_cols=82 Identities=15% Similarity=0.082 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc-Cc-cccccccC----Ccc-ccCCCCCCCcCCCCc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR-HG-TGHGVGAA----LNV-HEGPQSISFRYGNMT 427 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~-h~-~GHGvG~~----l~v-hE~P~~i~~~~~~~~ 427 (533)
.|++-..+.+++.++.+.++| |++-.+|+..++..+.+.|.... +| .|++.++- .++ ..-|+.+ + ++.
T Consensus 13 mr~A~~i~~~~~~~~~~~i~p-G~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H~~---p-~~~ 87 (286)
T PRK07281 13 MDRAGDFLASIHIGLRDLIKP-GVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAHAF---P-RHY 87 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccCCC---C-CCc
Confidence 356677778888888999999 99999999999999998885321 11 11111100 111 1122211 1 557
Q ss_pred cccCCCEEecCcce
Q 009507 428 PLVEGMIVSNEPGY 441 (533)
Q Consensus 428 ~L~~GMv~siEPg~ 441 (533)
.|++|.++.++-|.
T Consensus 88 ~l~~Gd~v~iD~g~ 101 (286)
T PRK07281 88 ILKEGDLLKVDMVL 101 (286)
T ss_pred CcCCCCEEEEEecc
Confidence 89999999999765
No 59
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=87.08 E-value=4.6 Score=39.70 Aligned_cols=93 Identities=17% Similarity=0.094 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-CcCc-c----ccccccCCccccCCCCCCCcCCCCccc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHG-T----GHGVGAALNVHEGPQSISFRYGNMTPL 429 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~~h~-~----GHGvG~~l~vhE~P~~i~~~~~~~~~L 429 (533)
|++...+.+++.++.++++| |++-.+|...++..+.+.|.. ..++ . ..+.| .+ ...|+ ..+ ++..|
T Consensus 13 r~A~~i~~~~~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~n-~~~~H---~~~-~~~~l 84 (247)
T TIGR00500 13 RKAGRLAAEVLEELEREVKP-GVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCIS--VN-EVVIH---GIP-DKKVL 84 (247)
T ss_pred HHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEec--cc-cEEEe---cCC-CCccc
Confidence 56666677778888889999 999999999999999998853 1111 1 11122 11 01111 111 46789
Q ss_pred cCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 430 VEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 430 ~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
++|.++.++-|.-..| |-.-+..+++|
T Consensus 85 ~~Gd~v~iD~g~~~~g-Y~aD~~RT~~v 111 (247)
T TIGR00500 85 KDGDIVNIDVGVIYDG-YHGDTAKTFLV 111 (247)
T ss_pred CCCCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 9999999998864433 44445555555
No 60
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=86.69 E-value=6 Score=38.48 Aligned_cols=99 Identities=14% Similarity=0.073 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-CcC--cccccccc--CCcc-----ccCCCCCCCcC
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH--GTGHGVGA--ALNV-----HEGPQSISFRY 423 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~~h--~~GHGvG~--~l~v-----hE~P~~i~~~~ 423 (533)
..|++-..+.+++.++.+.++| |++-.+|...+.+.+.+..-. |.. ....|.++ ++.+ |-.|. . .
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~p-G~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~-~---~ 77 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVP-GAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPL-K---S 77 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCC-C---C
Confidence 5678888899999999999999 999999988777777763221 211 11122221 0111 22221 0 0
Q ss_pred CCCccccCCCEEecCcceeecCcceEEEEEeEEEe
Q 009507 424 GNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 458 (533)
Q Consensus 424 ~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt 458 (533)
.++..|++|.++.++.|....| |-.-+..++++.
T Consensus 78 ~~~~~l~~Gd~v~iD~g~~~~G-Y~sD~tRT~~vG 111 (228)
T cd01089 78 DATYTLKDGDVVKIDLGCHIDG-YIAVVAHTIVVG 111 (228)
T ss_pred CCCcccCCCCEEEEEEEEEECC-EEEEEEEEEEeC
Confidence 1556799999999999987766 455566777664
No 61
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=86.59 E-value=3.7 Score=38.43 Aligned_cols=95 Identities=20% Similarity=0.146 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCccccccccCCccccCCCCCCCcCCCCccccCCC
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGM 433 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GM 433 (533)
..+++-..+.+++.++...++| |++-.++...+++.+.+.|..+.+.+-=+.| -+ ...|. +.+ ++.++++|.
T Consensus 3 ~~r~a~~i~~~~~~~~~~~~~~-G~te~ei~~~~~~~~~~~g~~~~~~~~v~~g--~~-~~~~h---~~~-~~~~i~~gd 74 (207)
T cd01066 3 RLRKAAEIAEAAMAAAAEAIRP-GVTEAEVAAAIEQALRAAGGYPAGPTIVGSG--AR-TALPH---YRP-DDRRLQEGD 74 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHCcC-CCCHHHHHHHHHHHHHHcCCCCCCCcEEEEC--cc-ccCcC---CCC-CCCCcCCCC
Confidence 4678888889999999999999 9999999999999999998733333222222 00 01121 111 356899999
Q ss_pred EEecCcceeecCcceEEEEEeEEE
Q 009507 434 IVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 434 v~siEPg~y~~g~~GiriEd~v~V 457 (533)
++.++.|....| |-.-+..++++
T Consensus 75 ~v~~d~g~~~~g-y~~d~~rt~~~ 97 (207)
T cd01066 75 LVLVDLGGVYDG-YHADLTRTFVI 97 (207)
T ss_pred EEEEEeceeECC-CccceeceeEc
Confidence 999998876554 33334444444
No 62
>PRK12318 methionine aminopeptidase; Provisional
Probab=85.12 E-value=7.1 Score=39.68 Aligned_cols=94 Identities=16% Similarity=0.078 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-----CcC-ccccccccCCcccc-CCCCCCCcCCCCcc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-----YRH-GTGHGVGAALNVHE-GPQSISFRYGNMTP 428 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-----~~h-~~GHGvG~~l~vhE-~P~~i~~~~~~~~~ 428 (533)
|++-..+-+++.++.++++| |++-.||..++++.+.+.|.. |.. +....+. .+..+ -|... .++.+
T Consensus 53 R~Aa~I~~~a~~a~~~~irp-G~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~--~g~n~~~~H~~----p~~~~ 125 (291)
T PRK12318 53 RKACQVTARILDALCEAAKE-GVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTIC--TSLNEVICHGI----PNDIP 125 (291)
T ss_pred HHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceE--eeccceeecCC----CCCCc
Confidence 56666777788888999999 999999999888888877742 210 0111111 11111 11101 14568
Q ss_pred ccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 429 LVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 429 L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
|++|.++.++.|....| |..-+..+++|
T Consensus 126 l~~GD~V~vD~g~~~~G-Y~aDitRT~~v 153 (291)
T PRK12318 126 LKNGDIMNIDVSCIVDG-YYGDCSRMVMI 153 (291)
T ss_pred cCCCCEEEEEEeEEECc-EEEEEEEEEEC
Confidence 99999999998876544 44555566555
No 63
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=73.36 E-value=16 Score=35.50 Aligned_cols=96 Identities=9% Similarity=-0.026 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCC--CCcchHHHHHHHHHHHcC-C---CCcCccccccccCCccccCCCCCCCcCCCCc
Q 009507 354 REKECFTRVLQGHIALDQAIFPQS--TPGFVLDAFARSSLWKIG-L---DYRHGTGHGVGAALNVHEGPQSISFRYGNMT 427 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G--~~~~~ld~~ar~~l~~~G-~---~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~ 427 (533)
.+.+.-..+.+++..+.+.++| | ++-.||++.+.+.+...| + .|.....=|... ..+|-.|. +.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~-G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~-~~~H~~p~-----~~~~r 77 (224)
T cd01085 5 AHIRDGVALVEFLAWLEQEVPK-GETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNG-AIVHYSPT-----EESNR 77 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCcc-CcCCCCcC-----cccCc
Confidence 3444555556778888899999 9 899999999887766543 1 122111111110 01222221 01267
Q ss_pred cccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 428 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 428 ~L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|++|.++.++-|....|. -.-+..+++|
T Consensus 78 ~l~~GD~V~iD~g~~~~gY-~aD~~RT~~v 106 (224)
T cd01085 78 KISPDGLYLIDSGGQYLDG-TTDITRTVHL 106 (224)
T ss_pred ccCCCCEEEEEeCccCCCc-ccccEEeecC
Confidence 8999999999988766553 3334444444
No 64
>PRK10879 proline aminopeptidase P II; Provisional
Probab=73.24 E-value=26 Score=37.77 Aligned_cols=91 Identities=15% Similarity=0.138 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc---CccccccccCCccccCCCCCCCcCCCCccccCC
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR---HGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 432 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~---h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~G 432 (533)
|++...+-+++.++++.++| |++-.+|.+.+...+.+.|..+. .-++-|.-. ...|-.| ++..|++|
T Consensus 183 r~A~~i~~~a~~~~~~~~~p-G~tE~ei~a~~~~~~~~~G~~~~~~~~iv~~G~na-~~~H~~~--------~~~~l~~G 252 (438)
T PRK10879 183 RRAGEISALAHTRAMEKCRP-GMFEYQLEGEIHHEFNRHGARYPSYNTIVGSGENG-CILHYTE--------NESEMRDG 252 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHCCCCCCCCCcEEEEcCcc-ccccCCC--------CccccCCC
Confidence 45666677788888999999 99999999988888888886432 212222111 0112111 45679999
Q ss_pred CEEecCcceeecCcceEEEEEeEEE
Q 009507 433 MIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 433 Mv~siEPg~y~~g~~GiriEd~v~V 457 (533)
.++.+..|....| |..-+.-|+.|
T Consensus 253 DlVliD~G~~~~G-Y~sDitRT~~v 276 (438)
T PRK10879 253 DLVLIDAGCEYKG-YAGDITRTFPV 276 (438)
T ss_pred CEEEEEeCeEECC-EEEEeEEEEEE
Confidence 9999999876655 55566666665
No 65
>PRK09795 aminopeptidase; Provisional
Probab=72.58 E-value=20 Score=37.41 Aligned_cols=91 Identities=12% Similarity=0.026 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc---CccccccccCCccccCCCCCCCcCCCCccccCC
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR---HGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 432 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~---h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~G 432 (533)
|++...+-+++.++...++| |++-.+|.......+.+.|.... .-.+.|-- .-.|... + ++.+|++|
T Consensus 137 r~a~~i~~~~~~~~~~~i~~-G~tE~e~~~~~~~~~~~~G~~~~~f~~iv~sG~~-----~~~ph~~---~-~~~~l~~g 206 (361)
T PRK09795 137 RLACGIADRGAEHIRRFIQA-GMSEREIAAELEWFMRQQGAEKASFDTIVASGWR-----GALPHGK---A-SDKIVAAG 206 (361)
T ss_pred HHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHCCCCcCCCCeEEEEecc-----ccccCCC---C-CCceecCC
Confidence 34555566677777888999 99999999999889998887432 22222211 1122211 1 45689999
Q ss_pred CEEecCcceeecCcceEEEEEeEEE
Q 009507 433 MIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 433 Mv~siEPg~y~~g~~GiriEd~v~V 457 (533)
.++.++-|....| |-.-+..|++|
T Consensus 207 d~v~~d~g~~~~g-Y~sd~tRt~~~ 230 (361)
T PRK09795 207 EFVTLDFGALYQG-YCSDMTRTLLV 230 (361)
T ss_pred CEEEEEeccccCC-EeecceEEEEe
Confidence 9999998864433 33445556555
No 66
>PRK14575 putative peptidase; Provisional
Probab=71.66 E-value=25 Score=37.43 Aligned_cols=92 Identities=15% Similarity=0.149 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC-CCcCccccccccCCccccCCCCCCCcCCCCccccCCCE
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL-DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMI 434 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~-~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv 434 (533)
|++-..+.+++.++.+.++| |++-.+|....+..+.+.|- .+... |.|+ .+-...|..+. ++..|++|.+
T Consensus 188 r~A~~i~~~a~~~~~~~i~p-G~tE~elaa~~~~~~~~~g~~~~~~~--~~v~--~G~~~~~h~~~----~~~~l~~Gd~ 258 (406)
T PRK14575 188 RKSAEITEYGITEASKLIRV-GCTSAELTAAYKAAVMSKSETHFSRF--HLIS--VGADFSPKLIP----SNTKACSGDL 258 (406)
T ss_pred HHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCCcCCcC--ceEE--ECCCcccCCCC----CCCcCCCCCE
Confidence 45666667788888899999 99999999988887777654 22211 2222 11112233121 4568999999
Q ss_pred EecCcceeecCcceEEEEEeEEE
Q 009507 435 VSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 435 ~siEPg~y~~g~~GiriEd~v~V 457 (533)
+.++.|....| |-.-+..++.|
T Consensus 259 v~iD~g~~~~G-Y~sditRT~~v 280 (406)
T PRK14575 259 IKFDCGVDVDG-YGADIARTFVV 280 (406)
T ss_pred EEEEeceEECC-EeeeeEEEEEC
Confidence 99998864433 44555566555
No 67
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=70.83 E-value=10 Score=35.10 Aligned_cols=58 Identities=19% Similarity=0.343 Sum_probs=41.7
Q ss_pred cCHHHHHHHHHHHHHHcC------CCEEEEccCC---c---------cccccCcccCCCCCCcceeEEEEEecCceEEEE
Q 009507 73 LDVASKLSSLRSDLVDAG------SSAIVISMLD---E---------IAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFV 134 (533)
Q Consensus 73 ~~~~~Ki~~lr~~m~~~g------~dallls~~d---~---------IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv 134 (533)
+.+.+|++++.+.+++.+ +|+++|.... + -.||+|+.=.| ..++++.+.+++++
T Consensus 4 ~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~aLq~WLlGYEfpd--------Tiiv~tk~~i~~lt 75 (163)
T PF14826_consen 4 ETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKSTALQTWLLGYEFPD--------TIIVFTKKKIHFLT 75 (163)
T ss_dssp HHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHHHHHHHHHSS--SS--------EEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHHHHHHHHhcccHhh--------hhhhhcCCEEEEEe
Confidence 457899999999999985 8998876552 3 23999986333 57788999988888
Q ss_pred eCCC
Q 009507 135 DDSK 138 (533)
Q Consensus 135 ~~~~ 138 (533)
...|
T Consensus 76 S~KK 79 (163)
T PF14826_consen 76 SKKK 79 (163)
T ss_dssp EHHH
T ss_pred CHHH
Confidence 7543
No 68
>PRK14576 putative endopeptidase; Provisional
Probab=69.01 E-value=34 Score=36.50 Aligned_cols=92 Identities=12% Similarity=0.139 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC-CCcCccccccccCCccccCCCCCCCcCCCCccccCCCE
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL-DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMI 434 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~-~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv 434 (533)
|++-..+-+++.++.+.++| |++-.+|....+..+++.|. .+... .-|+ .+.+-.|... .++..+++|.+
T Consensus 187 r~A~~i~~~~~~~~~~~i~p-G~tE~elaa~~~~~~~~~g~~~~~~~--~~v~--~G~~~~~h~~----~~~~~l~~Gd~ 257 (405)
T PRK14576 187 RKSAEITEYGIASAAKKIRV-GCTAAELTAAFKAAVMSFPETNFSRF--NLIS--VGDNFSPKII----ADTTPAKVGDL 257 (405)
T ss_pred HHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCCcCCCC--CEEE--ECCcccCCCC----CCCcccCCCCE
Confidence 45566666777888889999 99999999999888888764 22221 1121 1111112211 14567999999
Q ss_pred EecCcceeecCcceEEEEEeEEE
Q 009507 435 VSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 435 ~siEPg~y~~g~~GiriEd~v~V 457 (533)
+.++.|....| |..-+.-++++
T Consensus 258 v~~d~g~~~~G-Y~sd~tRT~~~ 279 (405)
T PRK14576 258 IKFDCGIDVAG-YGADLARTFVL 279 (405)
T ss_pred EEEEeceeECC-EEeeeeEEEEC
Confidence 99998864443 44445555544
No 69
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=67.78 E-value=29 Score=36.55 Aligned_cols=95 Identities=16% Similarity=0.050 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCccccccccCCcccc-CCCCCCCcCCCCccccCC
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHE-GPQSISFRYGNMTPLVEG 432 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~L~~G 432 (533)
..|++.....+++.++.+.++| |++-.+|.+.....+.+.|.... ....-|+ .+.+- .|+ ..+ ++..+++|
T Consensus 162 ~ir~A~~i~~~a~~~~~~~~~~-g~tE~ev~a~l~~~~~~~G~~~~-sf~~iv~--~G~n~a~pH---~~~-~~~~~~~g 233 (384)
T COG0006 162 KIRKAAEIADAALEAALEAIRP-GMTEAEIAAELEYALRKGGAEGP-SFDTIVA--SGENAALPH---YTP-SDRKLRDG 233 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCCcc-CcCcEEe--ccccccCcC---CCC-CcccccCC
Confidence 4578888889999999999998 99999999999999999985432 1122222 11111 121 111 45667999
Q ss_pred CEEecCcceeecCcceEEEEEeEEE
Q 009507 433 MIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 433 Mv~siEPg~y~~g~~GiriEd~v~V 457 (533)
-.+.++-|....| |---+-.|+.+
T Consensus 234 d~vliD~G~~~~g-Y~sDiTRT~~~ 257 (384)
T COG0006 234 DLVLIDLGGVYNG-YCSDITRTFPI 257 (384)
T ss_pred CEEEEEeeeEECC-ccccceeEEec
Confidence 9999998876655 43334444444
No 70
>PRK15173 peptidase; Provisional
Probab=64.48 E-value=47 Score=34.23 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCcCCCCccccCCCE
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMI 434 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv 434 (533)
|++-..+.+++.++.+.++| |++-.+|.......+.+.|.. +.-..--.+| ..-.|..+. ++..|++|.+
T Consensus 105 r~A~~i~~~~~~~~~~~i~~-G~tE~el~a~~~~~~~~~g~~~~~~~~~i~~G----~~~~~h~~~----~~~~l~~Gd~ 175 (323)
T PRK15173 105 RKSAEITEYGITEASKLIRV-GCTSAELTAAYKAAVMSKSETHFSRFHLISVG----ADFSPKLIP----SNTKACSGDL 175 (323)
T ss_pred HHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCCCCCCcEEEEC----CCCccCCCC----CCCccCCCCE
Confidence 45566667777788888999 999999998887777665542 2100001112 011122111 4567999999
Q ss_pred EecCcceeecCcceEEEEEeEEE
Q 009507 435 VSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 435 ~siEPg~y~~g~~GiriEd~v~V 457 (533)
+.++-|....| |..-+..|+.|
T Consensus 176 V~iD~g~~~~G-Y~aDitRT~~v 197 (323)
T PRK15173 176 IKFDCGVDVDG-YGADIARTFVV 197 (323)
T ss_pred EEEEeCccCCC-EeeeeEEEEEc
Confidence 99998763333 45556666665
No 71
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=62.98 E-value=31 Score=34.86 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHH----HHHHHHHHcCCC--CcCccccccccCCccccCCCCCCCcCCCCccc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDA----FARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPL 429 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~----~ar~~l~~~G~~--~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L 429 (533)
+++.++-.++...+.+-++| |++.-+|-. -.|..+.+.|+. ..-.||-++-++ ..|--|. +++.++|
T Consensus 89 rraAE~HRqvR~yv~s~ikP-Gmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~SlN~c-AAHyTpN-----aGd~tVL 161 (397)
T KOG2775|consen 89 RRAAEAHRQVRKYVQSIIKP-GMTMIEICETIENTTRKLILENGLNAGIGFPTGCSLNHC-AAHYTPN-----AGDKTVL 161 (397)
T ss_pred HHHHHHHHHHHHHHHHhccC-cccHHHHHHHHHHHHHHHHHhccccccccCCCcccccch-hhhcCCC-----CCCceee
Confidence 33344444445567778899 999776644 567777787774 233355555543 2354553 3577899
Q ss_pred cCCCEEecCcceeecC
Q 009507 430 VEGMIVSNEPGYYEDH 445 (533)
Q Consensus 430 ~~GMv~siEPg~y~~g 445 (533)
+.+.|+-+.-|....|
T Consensus 162 qydDV~KiDfGthi~G 177 (397)
T KOG2775|consen 162 KYDDVMKIDFGTHIDG 177 (397)
T ss_pred eecceEEEeccccccC
Confidence 9999999887776543
No 72
>TIGR03241 arg_catab_astB succinylarginine dihydrolase. Members of this family are succinylarginine dihydrolase (EC 3.5.3.23), the second of five enzymes in the arginine succinyltransferase (AST) pathway.
Probab=61.19 E-value=23 Score=37.10 Aligned_cols=190 Identities=21% Similarity=0.321 Sum_probs=110.8
Q ss_pred CCCCCHHHHHHHHHHHHhC-CC---EEEeCCCCC--hhhh-hcccCCCCCCC-CccccccccccCcCHHHHHHHHHHHHH
Q 009507 16 QFLFSSDAAEELKEAIAKK-NH---ELVYLYDLN--LVDV-IWKESRPKPPN-KPIRVHALKYAGLDVASKLSSLRSDLV 87 (533)
Q Consensus 16 ~~~~s~~~~~~~~~~l~~~-~~---~l~~~~~~n--lvd~-iW~~~rP~~p~-~~i~~~~~~~~g~~~~~Ki~~lr~~m~ 87 (533)
|.-++..+-..-+++.+.. +. ..+.+ .+| -||. +.+.|=-...+ +-+|.|...| ..-.+.++.||+.|.
T Consensus 205 p~rfPARQt~eAS~AVARlH~L~~~~~vf~-qQnp~~Id~GvFHNDVIaV~N~~vLf~He~AF--~d~~~~~~~ir~k~~ 281 (443)
T TIGR03241 205 PKRYPARQTLEASQAVARLHGLNPAQVVFA-QQNPDVIDQGVFHNDVIAVSNRNVLFHHQQAF--LNQSQVLDELRAKLA 281 (443)
T ss_pred CCCCCchhHHHHHHHHHHHhCCCccceEEe-ccCHHHHhcCCcccceEEecCcceeeEhHhhh--cCHHHHHHHHHHHhh
Confidence 4566666555555554321 11 12222 343 4552 22233333333 3457888888 466788999999998
Q ss_pred HcCCCEEEEccCCc--------cccccCcccCCCCCCcceeEEEEE-ecCceEEEEeCC-CCCHHHHhhhhcCCeEEeeC
Q 009507 88 DAGSSAIVISMLDE--------IAWLLNLRGSDVPHSPVMYAYLIV-EMDRAKLFVDDS-KVTPDVMDHLKNAGVELRPY 157 (533)
Q Consensus 88 ~~g~dallls~~d~--------IawL~n~rg~di~~~Pv~~s~liv-~~~~~~Lfv~~~-~~~~~~~~~l~~~~v~v~~y 157 (533)
..+.+-.+|.-+++ -.||+|- -++- +.++..|.++.+ +-.+.+
T Consensus 282 ~~~~~~~~ieVp~~~vsv~DAV~sYLFNS-------------QLlt~pdg~M~Lv~P~Ecr~n~~v-------------- 334 (443)
T TIGR03241 282 GLGQQFVAIEVPDAEVSVADAVSSYLFNS-------------QLLSREDGKMMLVVPEECRENAAV-------------- 334 (443)
T ss_pred ccCCCeEEEEeccccCcHHHHHHHhhhcc-------------eeeecCCCcEEEEechHhhcCHHH--------------
Confidence 76666665544433 2377762 2333 344666777642 122233
Q ss_pred ccHHHHHHHHHhCC---CeE-EEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchhh
Q 009507 158 NSILSEIKSLAAQG---AQL-WLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSK 233 (533)
Q Consensus 158 ~~~~~~l~~l~~~~---~~i-~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lr 233 (533)
+.+|..+...+ ++| .+| +.++... -+.+.+-++|
T Consensus 335 ---~~yl~~l~~~~~PI~~v~~fD-------lrqSM~N--------------------------------GGGPACLRLR 372 (443)
T TIGR03241 335 ---WAYLNELVAGGGPIDEVRVFD-------LRESMRN--------------------------------GGGPACLRLR 372 (443)
T ss_pred ---HHHHHHHHhcCCCcceEEEec-------chhhhhc--------------------------------CCCceeeeee
Confidence 34444433221 122 233 1122221 1345688999
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHH
Q 009507 234 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVAD 279 (533)
Q Consensus 234 avK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~ 279 (533)
.+-|+.|++.+-.+...++.-+.+.-.|+++.. +..++..|++.
T Consensus 373 Vvl~~~E~~Avnp~~lm~~~l~~~L~~wV~~hY--RdrL~~~DLaD 416 (443)
T TIGR03241 373 VVLNDAELAAVNPAVMMNDALFATLNAWVDRHY--RDRLSAADLAD 416 (443)
T ss_pred eeCCHHHHhhcCcceecCHHHHHHHHHHHHHhc--cccCChhhccC
Confidence 999999999999999999988888889999887 56677777654
No 73
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=58.47 E-value=46 Score=32.77 Aligned_cols=99 Identities=16% Similarity=0.038 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCC-CCCCCCeEEEecCCcccccc---cCCCCCCc
Q 009507 244 MLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGF-LDTSFDTISGSGANGAIIHY---KPEPGKCS 319 (533)
Q Consensus 244 ~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~-~~~sf~~i~~~G~n~a~~hy---~p~~~~~~ 319 (533)
.|+++...-.|..++++.+ +||++-.++.....+...+ .+. ....|..-++.|--- -.|= ..++.+++
T Consensus 121 ~~~~y~~~~~a~~~~i~~l------kpG~~~~dv~~~a~~~i~~-~~~~~~~~~~~~~GHgiGl-e~hE~~~~l~~~~~~ 192 (243)
T cd01091 121 QQKNYNFLLALQEEILKEL------KPGAKLSDVYQKTLDYIKK-KKPELEPNFTKNLGFGIGL-EFRESSLIINAKNDR 192 (243)
T ss_pred HHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHH-hChhHHHhCcCCcccccCc-ccccCccccCCCCCC
Confidence 4445555555666666655 8999999999888776433 221 112222222221110 1121 11223458
Q ss_pred ccCCCCeEEEEecee-ec----------CcccceeecCcCCC
Q 009507 320 VVDSKKLFLLDSGAQ-YV----------DGTTDITRTVHFGE 350 (533)
Q Consensus 320 ~i~~gd~vliD~G~~-y~----------gy~tDitRT~~~G~ 350 (533)
+|++|.++.+..|.. .. .|.-=++-|+.|.+
T Consensus 193 ~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 193 KLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 999999999998875 22 34555777887753
No 74
>PF14980 TIP39: TIP39 peptide
Probab=56.82 E-value=7.2 Score=27.87 Aligned_cols=19 Identities=42% Similarity=0.787 Sum_probs=13.6
Q ss_pred hcCCHHHH-HHHHHHHHHHH
Q 009507 490 SLLSAAEI-DWLNNYHSQVW 508 (533)
Q Consensus 490 ~ll~~~e~-~wln~yh~~v~ 508 (533)
.||+.-|+ +|||.|-++..
T Consensus 28 rLl~amER~~WLnSYMqkLL 47 (51)
T PF14980_consen 28 RLLTAMERQKWLNSYMQKLL 47 (51)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45665555 89999988753
No 75
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=53.81 E-value=12 Score=32.18 Aligned_cols=40 Identities=18% Similarity=0.132 Sum_probs=31.6
Q ss_pred CCCCeEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhh
Q 009507 7 EAELALIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 50 (533)
Q Consensus 7 ~~~~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~i 50 (533)
....+||+|+..+|...++.|++.+. +.+++.. .++++++
T Consensus 90 ~~~~~igve~~~~~~~~~~~l~~~~~--~~~~v~~--~~~i~~~ 129 (132)
T PF01321_consen 90 PEGKRIGVEPDSLSAAEYQRLQEALP--GAEFVDA--SPLIEEL 129 (132)
T ss_dssp TTTSEEEEETTTSBHHHHHHHHHHST--TSEEEEE--HHHHHHH
T ss_pred CCCCEEEEcCCcChHHHHHHHHHhCC--CCEEEEc--HHHHHHc
Confidence 34589999999999999999999884 4477774 5666655
No 76
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=51.49 E-value=63 Score=33.59 Aligned_cols=97 Identities=19% Similarity=0.087 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHH-------------cCCCCcCccccccccCCccccCCCCCCC
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWK-------------IGLDYRHGTGHGVGAALNVHEGPQSISF 421 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~-------------~G~~~~h~~GHGvG~~l~vhE~P~~i~~ 421 (533)
.|.+-+.+.++...+.+.+.| |++..+|-......+-+ .|.-|+ |-=.|-.+ ..|=.|. .+
T Consensus 24 Yk~AgeI~n~~lk~V~~~~~~-gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfP--T~Isvnnc-v~h~sPl-ks- 97 (398)
T KOG2776|consen 24 YKMAGEIVNKVLKSVVELCQP-GASVREICEKGDSLILEETGKIYKKEKDFEKGIAFP--TSISVNNC-VCHFSPL-KS- 97 (398)
T ss_pred hhhHHHHHHHHHHHHHHHhcC-CchHHHHHHhhhHHHHHHHHHHHhhhhhhhcccccc--ceecccce-eeccCcC-CC-
Confidence 355566777788888999999 99998886655443332 122222 11111111 0122342 21
Q ss_pred cCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeec
Q 009507 422 RYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 460 (533)
Q Consensus 422 ~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~ 460 (533)
+.+..|++|.|+-|..|..++| |-.-+..+++|.+.
T Consensus 98 --d~~~~Lk~GDvVKIdLG~HiDG-fiA~vaHT~VV~~~ 133 (398)
T KOG2776|consen 98 --DADYTLKEGDVVKIDLGVHIDG-FIALVAHTIVVGPA 133 (398)
T ss_pred --CCcccccCCCEEEEEeeeeecc-ceeeeeeeEEeccC
Confidence 2467899999999999999987 56678999999886
No 77
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=47.77 E-value=1.4e+02 Score=31.50 Aligned_cols=97 Identities=16% Similarity=0.110 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccc---cC--CCCCC
Q 009507 244 MLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHY---KP--EPGKC 318 (533)
Q Consensus 244 ~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy---~p--~~~~~ 318 (533)
+|++....-.|+.+.++.+ +||+|-.++.....+.. +..|+... ..+--+.|-.. .+++ .| ++.++
T Consensus 272 ~~~~~~~~~~a~~~~i~~i------kpG~~~~dv~~~~~~~~-~~~G~~~~-h~~GhgiGl~~-~~~~~e~~~~l~~~~~ 342 (391)
T TIGR02993 272 FLDAEKAVLEGMEAGLEAA------KPGNTCEDIANAFFAVL-KKYGIHKD-SRTGYPIGLSY-PPDWGERTMSLRPGDN 342 (391)
T ss_pred HHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHH-HHcCCccC-CCceeeeccCc-CCCCCCccccccCCCC
Confidence 4556666666666666655 99999999999888754 34555321 11111222211 0111 11 22345
Q ss_pred cccCCCCeEEEEeceeecCcccceeecCcCC
Q 009507 319 SVVDSKKLFLLDSGAQYVDGTTDITRTVHFG 349 (533)
Q Consensus 319 ~~i~~gd~vliD~G~~y~gy~tDitRT~~~G 349 (533)
.+|++|-++.+.-|.-..|+..-+.-|+++.
T Consensus 343 ~~L~~GMv~tvEpgiy~~~~Gvried~v~VT 373 (391)
T TIGR02993 343 TVLKPGMTFHFMTGLWMEDWGLEITESILIT 373 (391)
T ss_pred ceecCCCEEEEcceeEeCCCCeEEeeEEEEC
Confidence 8999999999998875455444566677774
No 78
>smart00862 Trans_reg_C Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.
Probab=43.61 E-value=44 Score=25.81 Aligned_cols=57 Identities=19% Similarity=0.338 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHhCCCEEEeCCCCChhhhhcccCCCCCCCCccccccccccCcCHHHHHHHHHHHHHHcCC
Q 009507 20 SSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAGS 91 (533)
Q Consensus 20 s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~iW~~~rP~~p~~~i~~~~~~~~g~~~~~Ki~~lr~~m~~~g~ 91 (533)
|..+++ +-..|....-+.++ .+++++.+|+ +++... +-.+...-+.+||+.|.+.+.
T Consensus 7 t~~e~~-lL~~L~~~~~~~vs--~~~l~~~lw~-~~~~~~-----------~~~~l~~~i~~LR~~l~~~~~ 63 (78)
T smart00862 7 TPKEFR-LLELLLRNPGRVVS--REELLEAVWG-DDDDDV-----------DDNTLDVHISRLRKKLEDDGA 63 (78)
T ss_pred CHHHHH-HHHHHHhCCCCccC--HHHHHHHHcC-CCCCCC-----------ccchHHHHHHHHHHHHhcCCC
Confidence 666677 44555444334554 4789999994 443111 114578889999999987543
No 79
>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress).
Probab=37.20 E-value=37 Score=29.44 Aligned_cols=25 Identities=44% Similarity=0.632 Sum_probs=20.3
Q ss_pred cchhcCCHHHHH--HHHHHHHHHHHHH
Q 009507 487 VDLSLLSAAEID--WLNNYHSQVWEKV 511 (533)
Q Consensus 487 i~~~ll~~~e~~--wln~yh~~v~~~~ 511 (533)
+|++-||++|+- |||-||..+...+
T Consensus 2 v~~~~l~~~e~lAFwIN~yNal~~h~~ 28 (117)
T PF04784_consen 2 VDLSSLSREEKLAFWINLYNALVLHAI 28 (117)
T ss_pred cChHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 467778988885 9999999987643
No 80
>PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification
Probab=36.59 E-value=97 Score=31.73 Aligned_cols=88 Identities=14% Similarity=0.037 Sum_probs=60.2
Q ss_pred cCCCCeEEEcCCCCCHHHHHHHHHHHHhCC-CEEEeCCCCChhhhhcccCCCCCCCCccccccccccCcCHHHHHHHHHH
Q 009507 6 QEAELALIPVQFLFSSDAAEELKEAIAKKN-HELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRS 84 (533)
Q Consensus 6 ~~~~~~vg~D~~~~s~~~~~~~~~~l~~~~-~~l~~~~~~nlvd~iW~~~rP~~p~~~i~~~~~~~~g~~~~~Ki~~lr~ 84 (533)
..+..+|||||...-..+++-+++.+.... +..+++ -|..+ .. .-.-.-||.+.+=|--.+=-+-+..+++
T Consensus 136 ~GA~~ViGiDP~~lf~~QF~~i~~~lg~~~~~~~lpl----gvE~L---p~-~~~FDtVF~MGVLYHrr~Pl~~L~~Lk~ 207 (315)
T PF08003_consen 136 RGAKSVIGIDPSPLFYLQFEAIKHFLGQDPPVFELPL----GVEDL---PN-LGAFDTVFSMGVLYHRRSPLDHLKQLKD 207 (315)
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHhCCCccEEEcCc----chhhc---cc-cCCcCEEEEeeehhccCCHHHHHHHHHH
Confidence 345568999999999999999988874332 223322 12222 11 2335668888899999999999999999
Q ss_pred HHHHcC---CCEEEEccCCc
Q 009507 85 DLVDAG---SSAIVISMLDE 101 (533)
Q Consensus 85 ~m~~~g---~dallls~~d~ 101 (533)
.|+..| ++.++|-..++
T Consensus 208 ~L~~gGeLvLETlvi~g~~~ 227 (315)
T PF08003_consen 208 SLRPGGELVLETLVIDGDEN 227 (315)
T ss_pred hhCCCCEEEEEEeeecCCCc
Confidence 998766 45555554444
No 81
>cd00383 trans_reg_C Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and a response regulator. The former autophosphorylates in a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. The C-terminal effector domain contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunite of RNA polymerase.
Probab=33.50 E-value=68 Score=25.83 Aligned_cols=65 Identities=17% Similarity=0.200 Sum_probs=39.6
Q ss_pred CeEEEcCCCC--CHHHHHHHHHHHHhCCCEEEeCCCCChhhhhcccCCCCCCCCccccccccccCcCHHHHHHHHHHHHH
Q 009507 10 LALIPVQFLF--SSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLV 87 (533)
Q Consensus 10 ~~vg~D~~~~--s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~iW~~~rP~~p~~~i~~~~~~~~g~~~~~Ki~~lr~~m~ 87 (533)
..+-++...+ |..+++-|. .|....-+.++ .+.|++.+|+ +.+..+ -.+...-+.+||+.|.
T Consensus 13 ~~l~~~~~~v~Lt~~e~~lL~-~L~~~~~~~vs--~~~l~~~lw~-~~~~~~------------~~~l~~~I~rLRkkl~ 76 (95)
T cd00383 13 REVTRDGEPVELTPKEFELLE-LLARNPGRVLS--REQLLEAVWG-DDYDVD------------DRTVDVHISRLRKKLE 76 (95)
T ss_pred CEEEECCEEEEeCHHHHHHHH-HHHhCCCCcCC--HHHHHHHhcC-CCCCCC------------cccHHHHHHHHHHHhc
Confidence 3455555543 445555444 44443345565 5789999994 443221 1346788999999998
Q ss_pred HcC
Q 009507 88 DAG 90 (533)
Q Consensus 88 ~~g 90 (533)
+.+
T Consensus 77 ~~~ 79 (95)
T cd00383 77 DDP 79 (95)
T ss_pred cCC
Confidence 765
No 82
>KOG3303 consensus Predicted alpha-helical protein, potentially involved in replication/repair [Replication, recombination and repair]
Probab=29.31 E-value=55 Score=30.67 Aligned_cols=24 Identities=33% Similarity=0.494 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCC
Q 009507 492 LSAAEIDWLNNYHSQVWEKVSPLL 515 (533)
Q Consensus 492 l~~~e~~wln~yh~~v~~~~~~~l 515 (533)
||.+|++|+|+|.....+-.+|..
T Consensus 109 ls~~E~eyf~~Ys~~La~y~~~~g 132 (192)
T KOG3303|consen 109 LSHEEEEYFKNYSNLLAEYMGPLG 132 (192)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCcc
Confidence 788999999999988888777754
No 83
>PF04555 XhoI: Restriction endonuclease XhoI; InterPro: IPR007636 There are four classes of restriction endonucleases: types I, II,III and IV. All types of enzymes recognise specific short DNA sequences and carry out the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. They differ in their recognition sequence, subunit composition, cleavage position, and cofactor requirements [, ], as summarised below: Type I enzymes (3.1.21.3 from EC) cleave at sites remote from recognition site; require both ATP and S-adenosyl-L-methionine to function; multifunctional protein with both restriction and methylase (2.1.1.72 from EC) activities. Type II enzymes (3.1.21.4 from EC) cleave within or at short specific distances from recognition site; most require magnesium; single function (restriction) enzymes independent of methylase. Type III enzymes (3.1.21.5 from EC) cleave at sites a short distance from recognition site; require ATP (but doesn't hydrolyse it); S-adenosyl-L-methionine stimulates reaction but is not required; exists as part of a complex with a modification methylase methylase (2.1.1.72 from EC). Type IV enzymes target methylated DNA. Type II restriction endonucleases (3.1.21.4 from EC) are components of prokaryotic DNA restriction-modification mechanisms that protect the organism against invading foreign DNA. These site-specific deoxyribonucleases catalyse the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. Of the 3000 restriction endonucleases that have been characterised, most are homodimeric or tetrameric enzymes that cleave target DNA at sequence-specific sites close to the recognition site. For homodimeric enzymes, the recognition site is usually a palindromic sequence 4-8 bp in length. Most enzymes require magnesium ions as a cofactor for catalysis. Although they can vary in their mode of recognition, many restriction endonucleases share a similar structural core comprising four beta-strands and one alpha-helix, as well as a similar mechanism of cleavage, suggesting a common ancestral origin []. However, there is still considerable diversity amongst restriction endonucleases [, ]. The target site recognition process triggers large conformational changes of the enzyme and the target DNA, leading to the activation of the catalytic centres. Like other DNA binding proteins, restriction enzymes are capable of non-specific DNA binding as well, which is the prerequisite for efficient target site location by facilitated diffusion. Non-specific binding usually does not involve interactions with the bases but only with the DNA backbone []. This entry represents type II restriction enzymes such as XhoI (3.1.21.4 from EC), which recognises the double-stranded sequence CTCGAG and cleave after C-1 [].; GO: 0003677 DNA binding, 0009036 Type II site-specific deoxyribonuclease activity, 0009307 DNA restriction-modification system
Probab=28.58 E-value=97 Score=29.25 Aligned_cols=37 Identities=19% Similarity=0.230 Sum_probs=32.5
Q ss_pred CCCCCCCCccccccccccCcCHHHHHHHHHHHHHHcC
Q 009507 54 SRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAG 90 (533)
Q Consensus 54 ~rP~~p~~~i~~~~~~~~g~~~~~Ki~~lr~~m~~~g 90 (533)
-+|-...+|-|....+|.|.||.+|.+-+.+.|...+
T Consensus 135 ~~pVr~~~phFpv~p~F~g~SY~~Ry~ilc~rLv~e~ 171 (196)
T PF04555_consen 135 RRPVRVSEPHFPVDPEFKGASYLKRYEILCERLVQER 171 (196)
T ss_pred cCCCcCCCCCCCccHHhcCCcHHHHHHHHHHHHHHhc
Confidence 4788888999999999999999999999988876654
No 84
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=27.81 E-value=41 Score=32.05 Aligned_cols=25 Identities=16% Similarity=0.417 Sum_probs=20.2
Q ss_pred cccccCCCCCCcccCCCCeEEEEece
Q 009507 308 IIHYKPEPGKCSVVDSKKLFLLDSGA 333 (533)
Q Consensus 308 ~~hy~p~~~~~~~i~~gd~vliD~G~ 333 (533)
++|+-+|. +|-.+..+++++||+|-
T Consensus 113 ivHGDLTt-sNiIl~~~~i~~IDfGL 137 (204)
T COG3642 113 IVHGDLTT-SNIILSGGRIYFIDFGL 137 (204)
T ss_pred eecCCCcc-ceEEEeCCcEEEEECCc
Confidence 46887775 67888888899999994
No 85
>PRK13607 proline dipeptidase; Provisional
Probab=27.25 E-value=1.8e+02 Score=31.39 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHH
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 387 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~a 387 (533)
.|++-..+.+++.+++++++| |++-.+|....
T Consensus 170 mr~A~~i~~~a~~~~~~~i~p-G~tE~ei~~~~ 201 (443)
T PRK13607 170 MREAQKIAVAGHRAAKEAFRA-GMSEFDINLAY 201 (443)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHH
Confidence 356777778888899999999 99988887543
No 86
>PF00486 Trans_reg_C: Transcriptional regulatory protein, C terminal; InterPro: IPR001867 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain that is almost always found associated with the response regulator receiver domain (see IPR001789 from INTERPRO). It may play a role in DNA binding [].; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2K4J_A 2JPB_A 1ODD_A 1OPC_A 1KGS_A 2PMU_E 2JZY_A 1GXP_B 1QQI_A 2Z33_A ....
Probab=26.99 E-value=55 Score=25.28 Aligned_cols=56 Identities=20% Similarity=0.361 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHHHHhCCCEEEeCCCCChhhhhcccCCCCCCCCccccccccccCcCHHHHHHHHHHHHHHcC
Q 009507 19 FSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVDAG 90 (533)
Q Consensus 19 ~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~iW~~~rP~~p~~~i~~~~~~~~g~~~~~Ki~~lr~~m~~~g 90 (533)
+|..+++-|.--+...+ +.++ .+.|++.+|+ +.+ ..+..+....+.+||+.|++.+
T Consensus 6 Lt~~e~~lL~~L~~~~~-~~vs--~~~l~~~~w~-~~~------------~~~~~~l~~~I~rLR~kL~~~~ 61 (77)
T PF00486_consen 6 LTPKEFRLLELLLRNPG-RVVS--REELIEALWG-DEE------------DVSDNSLDVHISRLRKKLEDAG 61 (77)
T ss_dssp SSHHHHHHHHHHHHTTT-SEEE--HHHHHHHHTS-SSS------------TTCTHHHHHHHHHHHHHHHSST
T ss_pred cCHHHHHHHHHHHhCCC-CCCC--HHHhCChhhh-ccc------------ccchhhHHHHHHHHHHHHhhcC
Confidence 35666666654444444 5666 5789999995 333 2234567889999999999865
No 87
>PTZ00445 p36-lilke protein; Provisional
Probab=22.06 E-value=3.4e+02 Score=26.36 Aligned_cols=80 Identities=14% Similarity=0.203 Sum_probs=52.4
Q ss_pred EEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCC--hhhhh---cccCCCCCCCCccccccccccCcCHHHHHHHHHHHH
Q 009507 12 LIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLN--LVDVI---WKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDL 86 (533)
Q Consensus 12 vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~n--lvd~i---W~~~rP~~p~~~i~~~~~~~~g~~~~~Ki~~lr~~m 86 (533)
.++| .+-..+..+.+.+.|++.||+++.. +-| ||+.. | .+|.. .... -+.+...-...+-..|
T Consensus 20 ~~~~-~~~~~~~~~~~v~~L~~~GIk~Va~-D~DnTlI~~HsgG~--~~~~~--~~~~------~~~~~tpefk~~~~~l 87 (219)
T PTZ00445 20 GLFD-HLNPHESADKFVDLLNECGIKVIAS-DFDLTMITKHSGGY--IDPDN--DDIR------VLTSVTPDFKILGKRL 87 (219)
T ss_pred cccc-cCCHHHHHHHHHHHHHHcCCeEEEe-cchhhhhhhhcccc--cCCCc--chhh------hhccCCHHHHHHHHHH
Confidence 3455 4445567888889999999999886 544 34422 6 34441 1111 1223334466788889
Q ss_pred HHcCCCEEEEccCCccc
Q 009507 87 VDAGSSAIVISMLDEIA 103 (533)
Q Consensus 87 ~~~g~dallls~~d~Ia 103 (533)
++.|+..+|+|-.|+..
T Consensus 88 ~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 88 KNSNIKISVVTFSDKEL 104 (219)
T ss_pred HHCCCeEEEEEccchhh
Confidence 99999999999888876
No 88
>cd07356 HN_L-whirlin_R1_like First harmonin_N_like domain (repeat 1) of the long isoform of whirlin, and related domains. This subgroup contains the first of two harmonin_N_like domains of the long isoform of whirlin, and related domains. Whirlin is a postsynaptic density-95/discs-large/ZO-1 (PDZ) domain-containing scaffold protein which binds various components of the Usher protein network of the inner ear and the retina: erythrocyte protein p55, usherin, VlGR1, and myosin XVa. The long isoform of whirlin contains two harmonin_N_like domains, and three PDZ protein-binding domains, PDZ1-3. This first harmonin_N_like domain precedes PDZ1, and is a putative protein-binding module based on its sequence similarity to the N-terminal domain of harmonin. This first harmonin_N_like domain has been assayed for interaction with the cytoplasmic domain of cadherin 23 (a component of the Usher network and an interacting partner of the harmonin N-domain), however no interaction could be detected. Th
Probab=21.73 E-value=93 Score=24.78 Aligned_cols=29 Identities=41% Similarity=0.642 Sum_probs=20.4
Q ss_pred hcCCHHHHH----HHHHHHHH--HHHH---HCCCCcHH
Q 009507 490 SLLSAAEID----WLNNYHSQ--VWEK---VSPLLDGF 518 (533)
Q Consensus 490 ~ll~~~e~~----wln~yh~~--v~~~---~~~~l~~~ 518 (533)
.+||+.|++ -||+||++ |++. |.+.|+..
T Consensus 14 ~lLs~~Er~~f~h~Ln~Y~~~RnV~~Lv~sL~~vLd~P 51 (78)
T cd07356 14 KLLSEAEREEFIHCLNDYHAKRNVYDLVQSLKVVLDTP 51 (78)
T ss_pred HHccHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhCCH
Confidence 578888876 58999987 7663 44566544
No 89
>PF09776 Mitoc_L55: Mitochondrial ribosomal protein L55; InterPro: IPR018615 Members of this family are involved in mitochondrial biogenesis and G2/M phase cell cycle progression. They form a component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.
Probab=20.39 E-value=60 Score=28.20 Aligned_cols=40 Identities=23% Similarity=0.249 Sum_probs=27.0
Q ss_pred cceecccCCCCCCccchhcCCHHHH-HHHHHHHHHHHHHHCCCCcH
Q 009507 473 GFEKLTFVPIQTKLVDLSLLSAAEI-DWLNNYHSQVWEKVSPLLDG 517 (533)
Q Consensus 473 g~e~LT~~P~~~~li~~~ll~~~e~-~wln~yh~~v~~~~~~~l~~ 517 (533)
.+..+-..| +|.+.||++|. .+|-.-+.+...++.+.+++
T Consensus 63 EPR~ii~mP-----lDl~~LSeeERk~rl~kR~pk~k~~~~~e~eD 103 (116)
T PF09776_consen 63 EPRRIIKMP-----LDLDTLSEEERKARLRKRKPKKKIKIEEELED 103 (116)
T ss_pred ChHHHhccc-----cCcccCCHHHHHHHHHHhCCccccccchhhcc
Confidence 455556677 66889999997 56666666555555666654
Done!