Query 009507
Match_columns 533
No_of_seqs 374 out of 2333
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 06:45:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009507.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009507hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ctz_A XAA-Pro aminopeptidase 100.0 3E-105 1E-109 884.3 39.0 496 6-532 111-621 (623)
2 3q6d_A Proline dipeptidase; st 100.0 3.2E-70 1.1E-74 568.7 30.6 349 73-487 1-354 (356)
3 4ege_A Dipeptidase PEPE; struc 100.0 1.3E-68 4.3E-73 560.1 29.5 366 61-488 1-375 (378)
4 4fkc_A XAA-Pro aminopeptidase; 100.0 1.3E-67 4.4E-72 553.2 29.8 360 67-488 7-376 (377)
5 2zsg_A Aminopeptidase P, putat 100.0 8.3E-67 2.8E-71 543.5 29.0 343 77-483 2-355 (359)
6 1wn1_A Dipeptidase; prolidase, 100.0 1.2E-66 4E-71 541.6 25.2 343 77-484 1-353 (356)
7 1wy2_A XAA-Pro dipeptidase; st 100.0 4E-66 1.4E-70 536.5 29.2 340 76-482 5-348 (351)
8 1kp0_A Creatine amidinohydrola 100.0 3.6E-64 1.2E-68 531.4 30.1 365 69-486 18-397 (402)
9 3biq_A FACT complex subunit SP 100.0 1.5E-64 5E-69 544.3 27.5 382 68-496 6-454 (467)
10 1chm_A Creatine amidinohydrola 100.0 2.1E-62 7.3E-67 517.5 28.3 371 62-485 10-396 (401)
11 3cb6_A FACT complex subunit SP 100.0 1.8E-62 6.1E-67 524.9 26.0 371 68-490 6-440 (444)
12 4b28_A Metallopeptidase, famil 100.0 4.2E-63 1.4E-67 529.7 18.1 360 70-489 74-469 (470)
13 2v3z_A XAA-Pro aminopeptidase; 100.0 1.6E-60 5.5E-65 508.5 27.2 365 71-488 4-431 (440)
14 3ig4_A XAA-Pro aminopeptidase; 100.0 1.1E-59 3.6E-64 498.2 25.2 363 73-501 4-421 (427)
15 2iw2_A XAA-Pro dipeptidase; me 100.0 3.4E-54 1.2E-58 465.4 23.3 367 68-491 17-480 (494)
16 3rva_A Organophosphorus acid a 100.0 1.9E-53 6.4E-58 453.0 23.1 352 74-481 11-440 (451)
17 3l24_A XAA-Pro dipeptidase; PI 100.0 2.7E-51 9.1E-56 440.4 22.9 353 74-483 11-440 (517)
18 3tav_A Methionine aminopeptida 100.0 7.8E-50 2.7E-54 402.7 21.0 233 224-481 21-286 (286)
19 3mx6_A Methionine aminopeptida 100.0 1.1E-49 3.7E-54 396.9 20.0 228 231-484 4-257 (262)
20 3pka_A Methionine aminopeptida 100.0 3.4E-49 1.2E-53 397.8 20.9 223 231-479 37-284 (285)
21 3tb5_A Methionine aminopeptida 100.0 4.2E-49 1.4E-53 393.1 21.1 227 232-483 1-251 (264)
22 2gg2_A Methionine aminopeptida 100.0 1.5E-48 5.3E-53 388.8 19.6 228 232-483 1-253 (263)
23 3s6b_A Methionine aminopeptida 100.0 1.8E-48 6E-53 401.6 20.3 232 231-487 99-358 (368)
24 1o0x_A Methionine aminopeptida 100.0 3.5E-48 1.2E-52 386.0 20.5 225 230-479 11-260 (262)
25 2b3h_A Methionine aminopeptida 100.0 1.9E-47 6.4E-52 391.1 20.8 228 231-483 71-324 (329)
26 1qxy_A Methionyl aminopeptidas 100.0 1.3E-47 4.3E-52 379.8 18.9 223 235-483 3-251 (252)
27 4fuk_A Methionine aminopeptida 100.0 1.1E-46 3.6E-51 388.0 19.7 235 223-481 51-308 (337)
28 2q8k_A Proliferation-associate 100.0 2E-40 6.9E-45 347.7 20.5 205 227-442 11-238 (401)
29 1xgs_A Methionine aminopeptida 100.0 3E-38 1E-42 319.0 18.7 203 239-457 1-205 (295)
30 1b6a_A Methionine aminopeptida 100.0 2.3E-37 7.8E-42 327.9 18.4 200 230-443 153-369 (478)
31 2nw5_A Methionine aminopeptida 100.0 1.6E-36 5.4E-41 312.9 15.5 202 234-450 40-256 (360)
32 3fm3_A Methionine aminopeptida 100.0 1.3E-30 4.5E-35 269.5 17.8 201 228-441 32-246 (358)
33 3il0_A Aminopeptidase P; XAA-P 99.7 2.4E-16 8.2E-21 139.3 9.9 126 75-236 4-131 (131)
34 3pn9_A Proline dipeptidase; st 99.6 6.1E-16 2.1E-20 137.8 5.4 130 75-236 3-138 (138)
35 3ovk_A Aminopeptidase P, XAA-P 99.5 1.2E-13 4.2E-18 122.2 12.0 123 75-233 8-132 (132)
36 3qoc_A Putative metallopeptida 99.5 3.5E-14 1.2E-18 126.4 8.4 130 70-233 5-135 (135)
37 4b6a_t Probable metalloproteas 99.5 4.8E-13 1.6E-17 143.0 15.0 181 227-410 32-272 (614)
38 3o5v_A X-Pro dipeptidase; crea 99.3 2.1E-12 7.2E-17 114.1 6.9 125 76-233 2-132 (132)
39 3ooo_A Proline dipeptidase; st 99.3 3.3E-12 1.1E-16 112.8 7.5 124 77-233 3-132 (132)
40 3i7m_A XAA-Pro dipeptidase; st 99.3 2.5E-12 8.7E-17 114.7 6.6 126 78-234 5-139 (140)
41 3ctz_A XAA-Pro aminopeptidase 99.1 3.3E-11 1.1E-15 133.1 6.2 158 75-266 6-189 (623)
42 3fm3_A Methionine aminopeptida 94.9 0.044 1.5E-06 55.9 7.3 88 354-448 47-140 (358)
43 4fuk_A Methionine aminopeptida 93.1 0.22 7.6E-06 50.2 8.4 87 354-447 71-162 (337)
44 1xgs_A Methionine aminopeptida 91.2 0.52 1.8E-05 46.6 8.2 95 353-457 4-100 (295)
45 3tb5_A Methionine aminopeptida 91.1 0.53 1.8E-05 45.5 8.1 95 355-457 13-112 (264)
46 2b3h_A Methionine aminopeptida 89.7 0.86 2.9E-05 45.7 8.4 94 356-457 85-183 (329)
47 3qoc_A Putative metallopeptida 89.5 0.2 6.7E-06 43.4 3.0 41 7-50 94-134 (135)
48 3s6b_A Methionine aminopeptida 88.5 1.2 4E-05 45.5 8.4 94 356-457 113-211 (368)
49 2q8k_A Proliferation-associate 87.4 0.63 2.2E-05 48.1 5.7 99 355-458 28-135 (401)
50 2nw5_A Methionine aminopeptida 87.4 1.1 3.8E-05 45.5 7.5 94 355-457 50-150 (360)
51 1qxy_A Methionyl aminopeptidas 87.1 1.8 6.1E-05 41.3 8.5 92 355-457 12-111 (252)
52 3pka_A Methionine aminopeptida 85.5 2.4 8.2E-05 41.4 8.6 94 356-457 51-149 (285)
53 3mx6_A Methionine aminopeptida 85.4 2.4 8.2E-05 40.7 8.4 95 355-457 17-116 (262)
54 1o0x_A Methionine aminopeptida 84.2 2.8 9.7E-05 40.3 8.3 94 356-457 26-125 (262)
55 2gg2_A Methionine aminopeptida 83.4 3.1 0.00011 39.9 8.3 96 355-457 13-114 (263)
56 3tav_A Methionine aminopeptida 82.8 3.5 0.00012 40.2 8.4 96 355-457 43-143 (286)
57 3ovk_A Aminopeptidase P, XAA-P 80.4 1.5 5E-05 37.4 4.1 38 8-50 94-131 (132)
58 1b6a_A Methionine aminopeptida 80.3 1.9 6.6E-05 45.4 5.8 82 356-446 170-259 (478)
59 4ege_A Dipeptidase PEPE; struc 79.8 5 0.00017 40.8 8.6 93 356-457 160-253 (378)
60 3q6d_A Proline dipeptidase; st 79.5 4.6 0.00016 40.5 8.2 80 356-445 140-222 (356)
61 1wy2_A XAA-Pro dipeptidase; st 78.7 5.7 0.00019 39.9 8.6 80 356-445 137-219 (351)
62 2zsg_A Aminopeptidase P, putat 77.9 6.1 0.00021 39.5 8.6 80 356-445 143-225 (359)
63 4b6a_t Probable metalloproteas 74.9 6.4 0.00022 42.4 7.9 101 355-460 49-184 (614)
64 2v3z_A XAA-Pro aminopeptidase; 73.1 9.3 0.00032 39.6 8.6 81 355-445 184-267 (440)
65 3il0_A Aminopeptidase P; XAA-P 72.8 3.5 0.00012 34.7 4.4 36 10-50 92-127 (131)
66 3ig4_A XAA-Pro aminopeptidase; 70.5 8.6 0.00029 39.8 7.6 80 356-445 181-263 (427)
67 1wn1_A Dipeptidase; prolidase, 67.2 12 0.00041 37.5 7.7 80 356-445 141-222 (356)
68 2iw2_A XAA-Pro dipeptidase; me 65.6 19 0.00064 37.9 9.1 85 355-445 196-284 (494)
69 3pn9_A Proline dipeptidase; st 59.3 7.6 0.00026 32.8 3.9 38 9-50 97-134 (138)
70 1kp0_A Creatine amidinohydrola 56.8 13 0.00046 37.7 5.9 83 356-445 167-255 (402)
71 4fkc_A XAA-Pro aminopeptidase; 56.5 24 0.00081 35.5 7.6 80 356-445 160-243 (377)
72 4b28_A Metallopeptidase, famil 51.5 28 0.00096 36.4 7.4 91 356-457 239-337 (470)
73 1chm_A Creatine amidinohydrola 45.3 25 0.00085 35.7 5.7 82 356-445 167-255 (401)
74 3ooo_A Proline dipeptidase; st 38.1 25 0.00086 29.3 3.7 36 10-50 96-131 (132)
75 3rva_A Organophosphorus acid a 36.9 69 0.0023 33.2 7.5 91 355-457 168-262 (451)
76 3i7m_A XAA-Pro dipeptidase; st 34.6 23 0.0008 29.9 2.9 39 8-50 98-137 (140)
77 2ki0_A DS119; beta-alpha-beta, 32.4 19 0.00063 22.4 1.3 25 342-366 4-28 (36)
78 3cb6_A FACT complex subunit SP 30.2 2.4E+02 0.0082 28.5 10.4 96 244-349 308-420 (444)
79 2e9x_A DNA replication complex 29.3 34 0.0012 29.8 3.1 24 489-512 103-126 (149)
80 3o5v_A X-Pro dipeptidase; crea 29.2 25 0.00085 29.4 2.2 36 10-50 96-131 (132)
81 3l24_A XAA-Pro dipeptidase; PI 28.6 90 0.0031 33.0 6.8 94 355-457 168-262 (517)
82 2k4j_A Putative transcriptiona 25.2 37 0.0013 27.9 2.5 64 11-90 32-97 (115)
83 2b3g_B Cellular tumor antigen 24.3 48 0.0016 19.6 2.0 18 484-501 5-23 (28)
84 4ard_A Capsid protein P27; vir 21.9 25 0.00085 29.4 0.7 37 472-510 30-67 (116)
No 1
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-105 Score=884.30 Aligned_cols=496 Identities=45% Similarity=0.773 Sum_probs=453.8
Q ss_pred cCCCCeEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhhcccCCCCCCCCccccccccccCcCHHHHHHHHHHH
Q 009507 6 QEAELALIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSD 85 (533)
Q Consensus 6 ~~~~~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~iW~~~rP~~p~~~i~~~~~~~~g~~~~~Ki~~lr~~ 85 (533)
++.+.+|||||+++|.+.+++|++.|.+++++|+++ +.||||.+| +|||..|..+++.++.+|+|+++.+|++++|+.
T Consensus 111 l~~~~~vG~d~~~~s~~~~~~l~~~l~~~~~~lv~~-~~~lvd~iw-~~Rp~k~~~e~~~~~~~~ag~~~~~rl~~lr~~ 188 (623)
T 3ctz_A 111 LPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPV-KENLVDKIW-TDRPERPCKPLLTLGLDYTGISWKDKVADLRLK 188 (623)
T ss_dssp CCTTCEEEECGGGSBHHHHHHHHHHHHHTTCEEEEC-SSCHHHHHC-TTCCCCCCCCCEECCHHHHSSCHHHHHHHHHHH
T ss_pred CcCCCEEEECcccccHHHHHHHHHHHHhcCCEEEec-CCCcHHHHh-hcCCCCCchhhhhcchhhcChhHHHHHHHHHHH
Confidence 467899999999999999999999999989999997 679999999 699999999999999999999999999999999
Q ss_pred HHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCH-HHHhhhh-------cCCeEEeeC
Q 009507 86 LVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTP-DVMDHLK-------NAGVELRPY 157 (533)
Q Consensus 86 m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~-~~~~~l~-------~~~v~v~~y 157 (533)
|+++++|++||++++||+||+|+||+|++|+|++++|++|+.++++||++..++.. ++.+++. ..++++++|
T Consensus 189 m~e~~~dallit~~~~i~yl~~~~G~dv~~~pi~~~~llv~~~~~~l~v~~~~~~~~~~~~~l~~~~~~p~~~~v~v~~y 268 (623)
T 3ctz_A 189 MAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGDRIDAPSVKEHLLLDLGLEAEYRIQVHPY 268 (623)
T ss_dssp HHTTTEEEEEECCHHHHHHHHTEECCSSSSSCCCSCEEEEESSCEEEECCSGGGGSHHHHHHTTTTSCCCGGGCEEEECG
T ss_pred HHHcCCCEEEECCHHHHHHHhCCCCccCCCCcceeEEEEEecCCcEEEEechhcCHHHHHHHHhhccccccCCceEEEEh
Confidence 99999999999999999999999999999999999999999999999999766654 6777773 246899999
Q ss_pred ccHHHHHHHHHhC---CCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchhhc
Q 009507 158 NSILSEIKSLAAQ---GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKA 234 (533)
Q Consensus 158 ~~~~~~l~~l~~~---~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lra 234 (533)
.++.+.|+.+... .++|++|+. .++.+++.|... .++++..+++..+|+
T Consensus 269 ~~~~~~l~~l~~~~~~~~~i~id~~-~~~~l~~~l~~~---------------------------~~~v~~~~~i~~~R~ 320 (623)
T 3ctz_A 269 KSILSELKALCADLSPREKVWVSDK-ASYAVSETIPKD---------------------------HRCCMPYTPICIAKA 320 (623)
T ss_dssp GGHHHHHHHHHHTCCTTCEEEEETT-SBHHHHHHSCGG---------------------------GEEEESSCHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCeEEEECch-hhHHHHHhcccc---------------------------ceEEecccHHHHHHh
Confidence 9999999888642 378999987 456666555321 135778899999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCC
Q 009507 235 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPE 314 (533)
Q Consensus 235 vK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~ 314 (533)
|||+.||++||+|+++++.|++++++|+++.+ .++|+||.+++++++.++.+..|+.+.+|++|+++|+|++++||.|+
T Consensus 321 iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i-~~~g~tE~el~~~l~~~~~~~~g~~~~sf~~iv~~G~n~a~~H~~~~ 399 (623)
T 3ctz_A 321 VKNSAESEGMRRAHIKDAVALCELFNWLEKEV-PKGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPTGAIIHYAPV 399 (623)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCCBHHHHHHHHHHHHHTSTTEEEESSCCEEEEGGGGGCTTCCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcHHHHHHHHHHHHHhcCCCcCCCCCceeeecCccccccCCCC
Confidence 99999999999999999999999999998887 36899999999999988776677778999999999999999999998
Q ss_pred CCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHc
Q 009507 315 PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI 394 (533)
Q Consensus 315 ~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~ 394 (533)
++++++|++||++++|+|++|.||+||+|||+++|+|+++|+++|++|+++++++++++||.|+++.+||.+||+++|+.
T Consensus 400 ~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~~ar~~l~~~ 479 (623)
T 3ctz_A 400 PETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDS 479 (623)
T ss_dssp GGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCEETTCBGGGGGGGGTHHHHHT
T ss_pred CCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHh
Confidence 66679999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CCCCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCCCCCCCCcccccc
Q 009507 395 GLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGVSYLGF 474 (533)
Q Consensus 395 G~~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~ 474 (533)
|++|.|++|||||+||++||+|..++.+.+++.+|+||||||+|||+|.+|.+||||||+|+||++++.++|++++||||
T Consensus 480 G~~~~h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy~~g~~GiRiEd~vlVt~~~~~~~~~~~~~lg~ 559 (623)
T 3ctz_A 480 GLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTL 559 (623)
T ss_dssp TCCCSSCSEEBCCSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETTTEEEECBEEEEEEEECCSSCCSSSCEEEE
T ss_pred CCCCCCCccccCCCCCCCCCCCccCCCCCCCCCccCCCeEEEEeCcEEECCceEEEEeeEEEEecCCcccccccccccCC
Confidence 99999999999999999999998666532256789999999999999999999999999999999876677888899999
Q ss_pred eecccCCCCCCccchhcCCHHHHHHHHHHHHHHHHHHCCCCcH----HHHHHHHHccccccC
Q 009507 475 EKLTFVPIQTKLVDLSLLSAAEIDWLNNYHSQVWEKVSPLLDG----FARQWLWNNTRPVAK 532 (533)
Q Consensus 475 e~LT~~P~~~~li~~~ll~~~e~~wln~yh~~v~~~~~~~l~~----~~~~wl~~~t~~~~~ 532 (533)
|+||.+|+++++|+.+|||++|++|||+||++||++|+|+|++ ++++||+++|+||.+
T Consensus 560 e~LT~~P~~~~~i~~~ll~~~e~~wln~yh~~v~~~~~p~l~~~~~~~~~~wl~~~t~~~~~ 621 (623)
T 3ctz_A 560 EPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWLIRETQPISK 621 (623)
T ss_dssp EECCCCCCCGGGSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred ceeeeCCccHHHHHHHhCCHHHHHHHHHHHHHHHHHHhHhhCCCCcHHHHHHHHHHhHhhcc
Confidence 9999999999999999999999999999999999999999985 579999999999964
No 2
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=3.2e-70 Score=568.67 Aligned_cols=349 Identities=26% Similarity=0.392 Sum_probs=311.1
Q ss_pred cCHHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhhhcCCe
Q 009507 73 LDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGV 152 (533)
Q Consensus 73 ~~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l~~~~v 152 (533)
+++.+|++++|+.|+++|+|++||++++|++||||++|++ +|++|+.++++||+|. +..++++..+. ++
T Consensus 1 ~~~~~Rl~~lr~~m~~~giDa~lI~~~~ni~YLtGf~g~~--------~~llvt~~~~~l~~d~-r~~~~a~~~~~--~~ 69 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTA--------GVVLISKKRAQFITDF-RYVEQASKQAV--GY 69 (356)
T ss_dssp -CHHHHHHHHHTTHHHHTCSEEEECCHHHHHHHHCCCSSS--------CEEEEESSCEEEEECG-GGHHHHHHHST--TS
T ss_pred CcHHHHHHHHHHHHHHcCCCEEEECChhhceEccCCCCCC--------eEEEEECCCeEEEECh-hhHHHHHhhCC--CC
Confidence 4789999999999999999999999999999999999986 6899999999999985 44445555553 56
Q ss_pred EEeeC-ccHHHHHHHHHh--CCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCcc
Q 009507 153 ELRPY-NSILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPI 229 (533)
Q Consensus 153 ~v~~y-~~~~~~l~~l~~--~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i 229 (533)
++..| .+..+.|.++.. +.++||+|++.+++..++.|++.+ |+ +++++++++
T Consensus 70 ~v~~~~~~~~~~l~~~l~~~~~~~igve~~~~~~~~~~~l~~~~------------------------~~-~~~~~~~~~ 124 (356)
T 3q6d_A 70 EIVQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAI------------------------DA-EFIPTSGLV 124 (356)
T ss_dssp EEEECSSCHHHHHHHHHHHHTCSEEEEETTTSBHHHHHHHHHHC------------------------CS-EEEEECSHH
T ss_pred EEEEeCCCHHHHHHHHHHhcCCceEEEcCccCCHHHHHHHhhhc------------------------cc-ceecchhhh
Confidence 77776 345555544432 367999999999999999998753 34 678999999
Q ss_pred chhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccc
Q 009507 230 AFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAII 309 (533)
Q Consensus 230 ~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~ 309 (533)
..+|++||+.||+.||+|+++++.++..+++++ ++|+||.|+++.++.+.. ..|+.+.+|++|+++|+|++++
T Consensus 125 ~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~e~~~~~~~~~~-~~g~~~~~f~~iv~~g~n~~~~ 197 (356)
T 3q6d_A 125 EKLRLIKTDSEIKILKEAAQIADAAFEHILSFI------RPGVSEIEVSNELEFFMR-KQGATSSSFDIIVASGLRSALP 197 (356)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTC------CTTCBHHHHHHHHHHHHH-HTTCSEESSCCEEEEGGGGGCT
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHH-HCCCCcCCCCCEEEEcCccccC
Confidence 999999999999999999999999998877766 899999999999998654 5688888999999999999999
Q ss_pred cccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHH
Q 009507 310 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS 389 (533)
Q Consensus 310 hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~ 389 (533)
||.|++ ++|++||++++|+|++|+||++|+|||+++|+|+++++++|+.|++++.+++++++| |+++++|+.++|+
T Consensus 198 H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~~~ 273 (356)
T 3q6d_A 198 HGVASE---KVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKA-GLTGREADALTRD 273 (356)
T ss_dssp TCBCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHH
T ss_pred CCCCCC---cccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHH
Confidence 999975 999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHcCC--CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCCCCCCC
Q 009507 390 SLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFG 467 (533)
Q Consensus 390 ~l~~~G~--~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~~~~~~ 467 (533)
++++.|+ +|.|++||||| +++||+|. ++. +++.+|+||||||+|||+|.+|++|+||||+|+||++
T Consensus 274 ~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~~--~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt~~------- 341 (356)
T 3q6d_A 274 YITEKGYGEYFGHSTGHGIG--LEIHEAPG-LAF--RSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSE------- 341 (356)
T ss_dssp HHHHTTCGGGCCSCSEEECS--SSSSEEEE-EST--TCCCBCCTTCEEEECCEEEETTTEEEECBEEEEECSS-------
T ss_pred HHHHcCCcccCCCCCcccCC--CCcCcCCC-CCC--CCCCCcCCCCEEEECCEEEECCCCeEEEccEEEEeCC-------
Confidence 9999999 68999999999 99999996 653 3678999999999999999999999999999999998
Q ss_pred CcccccceecccCCCCCCcc
Q 009507 468 GVSYLGFEKLTFVPIQTKLV 487 (533)
Q Consensus 468 ~~~~lg~e~LT~~P~~~~li 487 (533)
|+|.||..| ++|+
T Consensus 342 -----G~e~Lt~~p--~~l~ 354 (356)
T 3q6d_A 342 -----GNEVITKSP--KELI 354 (356)
T ss_dssp -----SEEECCCSC--CSCC
T ss_pred -----cceeCCCCC--cceE
Confidence 999999998 5554
No 3
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=1.3e-68 Score=560.12 Aligned_cols=366 Identities=25% Similarity=0.329 Sum_probs=312.8
Q ss_pred CccccccccccCcCHHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecC-ceEEEEeCCCC
Q 009507 61 KPIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKV 139 (533)
Q Consensus 61 ~~i~~~~~~~~g~~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~-~~~Lfv~~~~~ 139 (533)
.|++.+|..|+++++++|++++|+.|+++|+|++||++++|++||||+++++.. .| ++++|+.+ +++||++....
T Consensus 1 ~~~~~~~~~~~~~e~~~R~~~l~~~m~~~g~da~li~~~~ni~YltG~~~~~~~-r~---~~l~v~~~g~~~l~~~~~~~ 76 (378)
T 4ege_A 1 GPGSMDSGRFDTAVYARRLAAAAAATEQAGLAGLVITPGYDLRYLIGSRADTFE-RL---TALVLPASGVPTIVLPRLEL 76 (378)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCCCSS-SC---CEEEEESSSCCEEEEEGGGG
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEECCcchhHHhhCCCCCCCc-ce---EEEEEEeCCcEEEEEChhhH
Confidence 389999999999999999999999999999999999999999999999987522 22 68888865 68999975322
Q ss_pred CHHHHhh-hhcCCeEEeeCc---cHHHHHHHHHhC-CCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCC
Q 009507 140 TPDVMDH-LKNAGVELRPYN---SILSEIKSLAAQ-GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTT 214 (533)
Q Consensus 140 ~~~~~~~-l~~~~v~v~~y~---~~~~~l~~l~~~-~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (533)
..+++. +...++.+.+|. +..+.+.++... .++||+| +.++...+..|.+.+
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~igve-~~~~~~~~~~l~~~~--------------------- 133 (378)
T 4ege_A 77 -ASLKESAASDLGVCVRDWVDGDDPYQLVAVALGGAPAATAVT-DSMPALHLLPLADAL--------------------- 133 (378)
T ss_dssp -GGGGTSSTTTTTCEEEEECTTSCHHHHHHHHTTSSSCCEEEC-TTCCHHHHHHHHHHH---------------------
T ss_pred -HHHHhcccCCCCeEEEEecCCCCHHHHHHHHHhcCCCEEEEc-CCCcHHHHHHHHHHc---------------------
Confidence 222222 323457888874 345556555433 3689999 678888888888754
Q ss_pred CCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCC
Q 009507 215 GQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDT 294 (533)
Q Consensus 215 ~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~ 294 (533)
+.+++++++++..+|++||++||+.||+|+++++.++..+++++ ++|+||.|+++.++.++. ..|..+.
T Consensus 134 ----~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el~~~~~~~~~-~~G~~~~ 202 (378)
T 4ege_A 134 ----GVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFL------VPGRTEAQVAADIAEAIV-AEGHSAV 202 (378)
T ss_dssp ----TSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHH-HTTCSEE
T ss_pred ----CCeEEEcHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHH-HcCCCCC
Confidence 35678999999999999999999999999999999999988877 899999999999998754 5677777
Q ss_pred CCCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceee-cCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 009507 295 SFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQY-VDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAI 373 (533)
Q Consensus 295 sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y-~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~ 373 (533)
+| +|+++|+|++.+||.|++ ++|++||++++|+|++| +||++|+|||+++|+|+++++++|+.|++++.++++++
T Consensus 203 ~f-~iv~sG~n~~~~H~~~~~---~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~ 278 (378)
T 4ege_A 203 AF-VIVGSGPHGADPHHGYSD---RKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAV 278 (378)
T ss_dssp EE-EEEEEGGGGGCTTCCCCS---CBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred Ce-eEEEeeCCCCccCCCCCC---CCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 89 999999999999999975 99999999999999999 99999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHcCC--CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEE
Q 009507 374 FPQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRI 451 (533)
Q Consensus 374 ~P~G~~~~~ld~~ar~~l~~~G~--~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~Giri 451 (533)
+| |+++++|+.++|++++++|+ +|.|++||||| +++||.|. +.. +++.+|+||||||+|||+|.+|.+|+||
T Consensus 279 ~p-G~~~~~v~~~~~~~~~~~G~~~~~~h~~GHgiG--l~~hE~P~-i~~--~~~~~L~~Gmv~tiEPgiy~~g~~gvri 352 (378)
T 4ege_A 279 RP-GVTAAQVDAAARDVLADAGLAEYFVHRTGHGIG--LCVHEEPY-IVA--GNELPLVAGMAFSIEPGIYFPGRWGARI 352 (378)
T ss_dssp CT-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEE-ECT--TCCCBCCTTBEEEECCEEEETTTEEEEC
T ss_pred CC-CCcHHHHHHHHHHHHHHcCCCCcCCCCCcccCC--CCcCCCCc-cCC--CCCCccCCCCEEEECCEEEeCCccEEEE
Confidence 99 99999999999999999999 58999999999 99999997 442 3678999999999999999999999999
Q ss_pred EEeEEEeecCCCCCCCCcccccceecccCCCCCCccc
Q 009507 452 ENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVD 488 (533)
Q Consensus 452 Ed~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~li~ 488 (533)
||+|+||++ |+|.||..| ++|+.
T Consensus 353 Ed~v~Vt~~------------G~e~Lt~~p--~~l~~ 375 (378)
T 4ege_A 353 EDIVVVTEN------------GALSVNNRP--HELMV 375 (378)
T ss_dssp BEEEEEETT------------EEEESCCSC--CSCEE
T ss_pred eeEEEEeCC------------cCeECCCCC--CccEE
Confidence 999999998 999999999 55543
No 4
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=1.3e-67 Score=553.22 Aligned_cols=360 Identities=22% Similarity=0.312 Sum_probs=308.5
Q ss_pred cccccCcCHHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCc-eEEEEeCCCCCHHHHh
Q 009507 67 ALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDR-AKLFVDDSKVTPDVMD 145 (533)
Q Consensus 67 ~~~~~g~~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~-~~Lfv~~~~~~~~~~~ 145 (533)
+..|.-.++++|++++|+.|+++|+|++||++++|++||||+++.+....| .+++++.++ ++++.+ +......+
T Consensus 7 ~~~~~~~Ey~~Rl~rlr~~m~~~glDalli~~~~ni~YLTG~~~~~~~~~~---~~lvv~~~g~~~~~~~--~~~~~~~~ 81 (377)
T 4fkc_A 7 HHHHGSMDYKRRIHKFQAHFGKKGFEGALVAPGSNFYYLTGFNPLGTLERL---FVLILPSEGLLTAIAP--RLYEKELE 81 (377)
T ss_dssp -CCSSSSCHHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHSCCCCCCSSSC---CEEEEESSSCCEEEEE--GGGHHHHT
T ss_pred CCCcchHHHHHHHHHHHHHHHHCCCCEEEECCChhheeecCCCCCCCCcce---EEEEEcCCCcEEEEec--cchHHHHH
Confidence 455777899999999999999999999999999999999999987655555 356777664 555554 23222222
Q ss_pred hhhcCCeEEeeC---c----cHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCC
Q 009507 146 HLKNAGVELRPY---N----SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSG 218 (533)
Q Consensus 146 ~l~~~~v~v~~y---~----~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (533)
.+ ..++..| . .+.+.|+++....+++++|. .++...+..+.+.+ |
T Consensus 82 ~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~d~-~~~~~~~~~l~~~~------------------------~ 133 (377)
T 4fkc_A 82 EF---NGEVVLWSDSENPYKIFATKIKETFKEGEKLLIDD-TMPVGVFLKAKDIF------------------------D 133 (377)
T ss_dssp TC---SSEEEEECTTSCHHHHHHHHHHHHSCSSCEEEECT-TSCHHHHHHTHHHH------------------------T
T ss_pred hc---CCCEEEeccccCHHHHHHHHHHHhhhccceeeeec-cccHHHHHHHHhhC------------------------C
Confidence 22 2233333 2 33445555544578899984 57888888887754 3
Q ss_pred CCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCe
Q 009507 219 GPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDT 298 (533)
Q Consensus 219 ~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~ 298 (533)
+.+++++++++..+|+|||++||+.||+|+++++.|+.++++++ ++|+||.|+++.++..+..+.|+.+.+|++
T Consensus 134 ~~~~~d~~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~------~~G~tE~el~~~~~~~~~~~~g~~~~~f~~ 207 (377)
T 4fkc_A 134 KYSLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGK------LEGKSERELANRIEYMIKNEFGADDVSFEP 207 (377)
T ss_dssp TSEEEESHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSC------CTTCBHHHHHHHHHHHHHTSTTCCEESSCC
T ss_pred CCeEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhcc------CCCccHHHHHHHHhhhhhhccCCCCcccCc
Confidence 56788999999999999999999999999999999999888776 899999999999998766667888899999
Q ss_pred EEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCC
Q 009507 299 ISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQST 378 (533)
Q Consensus 299 i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~ 378 (533)
|+++|+|++++||.|++ ++|++||++++|+|++|+||++|+|||+++|+|+++|+++|+.|++++.+++++++| |+
T Consensus 208 iv~~G~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~ 283 (377)
T 4fkc_A 208 IVASGPNGANPHHRPSH---RKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAE-GI 283 (377)
T ss_dssp EEEEGGGGGCTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBT-TC
T ss_pred ccccccccccccccccc---ccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhhcC-Cc
Confidence 99999999999999876 999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CcchHHHHHHHHHHHcCC--CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEE
Q 009507 379 PGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLY 456 (533)
Q Consensus 379 ~~~~ld~~ar~~l~~~G~--~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~ 456 (533)
++++++.++++.+++.|+ +|.|++||||| |++||.|. ++. +++.+|+||||||+|||+|.+|.+||||||+|+
T Consensus 284 ~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~hE~P~-i~~--~~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~v~ 358 (377)
T 4fkc_A 284 PAEVVDATARGIISKYGYGEYFIHRTGHGLG--IDVHEEPY-ISP--GNKKILKDGMVFTIEPGIYLQGKFGVRIEDDVA 358 (377)
T ss_dssp BHHHHHHHHHHHHHHTTCTTTCCSCSEEECS--SSSSEEEE-ECS--SCCCBCCTTCEEEECCEEEETTTEEEECBEEEE
T ss_pred chhhhHHHHHHHHHHhcccccCCCCCeEeCC--CccccCCc-ccC--CCCCEeCCCCEEEECCeeEECCccEEEEccEEE
Confidence 999999999999999999 58999999999 99999997 653 477899999999999999999999999999999
Q ss_pred EeecCCCCCCCCcccccceecccCCCCCCccc
Q 009507 457 VKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVD 488 (533)
Q Consensus 457 Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~li~ 488 (533)
||++ |+|.||.+| ++||.
T Consensus 359 Vt~~------------g~e~Lt~~p--~eli~ 376 (377)
T 4fkc_A 359 LVDK------------KGIRLTNAD--RELIT 376 (377)
T ss_dssp EETT------------EEEESCCSC--CSCCB
T ss_pred EECC------------CcEECCCCC--CCeEe
Confidence 9998 999999998 66654
No 5
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=8.3e-67 Score=543.45 Aligned_cols=343 Identities=27% Similarity=0.395 Sum_probs=303.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEccCCcc-----ccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhhhcCC
Q 009507 77 SKLSSLRSDLVDAGSSAIVISMLDEI-----AWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAG 151 (533)
Q Consensus 77 ~Ki~~lr~~m~~~g~dallls~~d~I-----awL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l~~~~ 151 (533)
+|++++|+.|+++++|++|+++++|+ +||||+++++ ++++|+.+++.||++.... .++.+. .+
T Consensus 2 ~Rl~~Lr~~m~~~~lDa~li~~~~ni~~~~~~YLtGf~~~~--------~~llI~~~~~~L~~d~r~~-~~a~~~---~~ 69 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSF--------SIILISENTRLLITDSRYT-VQAKQE---TD 69 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEESTTTTHHHHHHHHCCCSSC--------EEEEEETTEEEEEECTTTH-HHHHHH---CC
T ss_pred hHHHHHHHHHHHCCCcEEEEEChhHcccccCeeEeccCCCC--------EEEEEECCCCEEEECcccH-HHHHhC---CC
Confidence 48999999999999999999999999 9999999875 7999999999999986433 344443 35
Q ss_pred eEEeeC-cc-HHHHHHHHHh--CCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCC
Q 009507 152 VELRPY-NS-ILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTS 227 (533)
Q Consensus 152 v~v~~y-~~-~~~~l~~l~~--~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 227 (533)
+++.+| .+ ..+.+.++.. +.++||+|++.++...++.|.+.+ ++.++++..+
T Consensus 70 ~~v~~~~~~~~~~~l~~~L~~~~~~~vgvd~~~~~~~~~~~l~~~l------------------------~~~~~v~~~~ 125 (359)
T 2zsg_A 70 FEVREVKGGDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAF------------------------GDRKFIGIDD 125 (359)
T ss_dssp SEEEEC---CCHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHHHT------------------------TTCEEEECHH
T ss_pred CEEEEecCcchHHHHHHHHHhcCCCEEEEeCCcCCHHHHHHHHhhC------------------------CCcEEEEChh
Confidence 788887 33 3444544432 257899999889999998887643 2346788889
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcc
Q 009507 228 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGA 307 (533)
Q Consensus 228 ~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a 307 (533)
++..+|++||+.||+.||+|+++++.|+.++++++ ++|+||.|+++.++... ...|+.+.+|++|+++|+|++
T Consensus 126 ~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~------~~G~te~e~~~~~~~~~-~~~g~~~~~f~~iv~~g~~~~ 198 (359)
T 2zsg_A 126 EVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQI------RAGMTEKEIAALLEYTM-RKEGAEGVAFDTIVASGCRSA 198 (359)
T ss_dssp HHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTC------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGG
T ss_pred hhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH-HHcCCCCCCCCCEEEEccccc
Confidence 99999999999999999999999999999988877 89999999999999864 457877789999999999999
Q ss_pred cccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHH
Q 009507 308 IIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFA 387 (533)
Q Consensus 308 ~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~a 387 (533)
++||.|++ ++|++||++++|+|++|+||++|+|||+++|+|+++++++|+.|++++.+++++++| |+++++|+.++
T Consensus 199 ~~h~~~~~---~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~p-G~~~~~v~~~~ 274 (359)
T 2zsg_A 199 LPHGKASD---KVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKA-GVTGKLLDSVA 274 (359)
T ss_dssp STTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHH
T ss_pred cccCCCCC---cccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHH
Confidence 99999875 899999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHcCC--CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCCCCC
Q 009507 388 RSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNR 465 (533)
Q Consensus 388 r~~l~~~G~--~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~~~~ 465 (533)
++++++.|+ +|.|++||||| +++||+|. ++. +++.+|+||||||+|||+|.+|.+|+||||+|+||++
T Consensus 275 ~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~~--~~~~~l~~gmv~tiEPgiy~~~~~gvriEd~v~vt~~----- 344 (359)
T 2zsg_A 275 REFIREKGYGEFFGHSLGHGIG--LEVHEGPA-ISF--RNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQ----- 344 (359)
T ss_dssp HHHHHHTTCGGGBCSCSEEECS--SSSSEEEE-EST--TCCCBCCTTBEEEECCEEEETTTEEEECBEEEEEETT-----
T ss_pred HHHHHHcCCcccCCCCCccccC--cccCCCCC-cCC--CCCCCcCCCCEEEECCEEEECCCcEEEEeeEEEEcCC-----
Confidence 999999999 68999999999 99999995 654 3678999999999999999999999999999999998
Q ss_pred CCCcccccceecccCCCC
Q 009507 466 FGGVSYLGFEKLTFVPIQ 483 (533)
Q Consensus 466 ~~~~~~lg~e~LT~~P~~ 483 (533)
|+|.||.+|.+
T Consensus 345 -------g~e~Lt~~~~~ 355 (359)
T 2zsg_A 345 -------GCEILTTLPRS 355 (359)
T ss_dssp -------EEEECCCSCCS
T ss_pred -------cceECCCCCcc
Confidence 99999999843
No 6
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=1.2e-66 Score=541.57 Aligned_cols=343 Identities=22% Similarity=0.252 Sum_probs=298.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCc-eEEEEeCCCCCHHHHhhhhcCCeEEe
Q 009507 77 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDR-AKLFVDDSKVTPDVMDHLKNAGVELR 155 (533)
Q Consensus 77 ~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~-~~Lfv~~~~~~~~~~~~l~~~~v~v~ 155 (533)
+|++++|+.|+++++|++++++++|++||||+++. +++.+ .+|++|+.++ ++||++..... .++. +++.
T Consensus 1 ~R~~~l~~~m~~~~~d~~li~~~~n~~yltG~~~~-~~~~~--~~~l~i~~~~~~~l~~~~~~~~-~~~~------~~v~ 70 (356)
T 1wn1_A 1 MRLEKFIHLLGERGFDGALISPGTNLYYLTGLRLH-EVGER--LAILAVSAEGDYRFLAPSLYEN-VVNN------FPAT 70 (356)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCS-CCTTS--CCEEEEETTSCEEEEEEGGGTT-TTTT------SCEE
T ss_pred CHHHHHHHHHHHCCCcEEEECCCccceeecCCcCC-CCCCc--eEEEEEeCCCcEEEEECcccHH-HhhC------CeEE
Confidence 48999999999999999999999999999999974 55544 3789998775 99999865433 2211 4455
Q ss_pred eCc---cHHHHHHHHHh----CCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCc
Q 009507 156 PYN---SILSEIKSLAA----QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSP 228 (533)
Q Consensus 156 ~y~---~~~~~l~~l~~----~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 228 (533)
+|. +..+.|.++.. ..++||+| +.++...+..|.+. |+.+++++.++
T Consensus 71 ~~~~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~~~~~~l~~~-------------------------~~~~~~~~~~~ 124 (356)
T 1wn1_A 71 FWHDGENPYAKLREILEELGISKGRILIE-DTMRADWLIGIMKL-------------------------GKFTFQPLSSL 124 (356)
T ss_dssp EECTTSCHHHHHHHHHHHTTCSSEEEEEC-TTSBHHHHHHHGGG-------------------------SCEEEEETHHH
T ss_pred EEcCCCCHHHHHHHHHHHhcCCCCEEEEe-CCcCHHHHHHHHcC-------------------------CCCeEEEcHHH
Confidence 552 23344444322 35689999 77888888777542 23457888899
Q ss_pred cchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCccc
Q 009507 229 IAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAI 308 (533)
Q Consensus 229 i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~ 308 (533)
+..+|++||+.||+.||+|+++++.|+.++++++ ++|+||.|+++.++.++.+. +.+.+|++|+++|+|+++
T Consensus 125 i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~~~~--~~~~~f~~iv~~g~n~~~ 196 (356)
T 1wn1_A 125 IKELRMIKDKEEVKMMEHASRIADKVFEEILTWD------LIGMKERELALKIELLIREL--SDGIAFEPIVASGENAAN 196 (356)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSC------CTTCBHHHHHHHHHHHHHHH--SSEESSCCEEEEGGGGGC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHh--CcCCCCCcEEEEeccccc
Confidence 9999999999999999999999999999998877 89999999999999876655 567899999999999999
Q ss_pred ccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHH
Q 009507 309 IHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 388 (533)
Q Consensus 309 ~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar 388 (533)
+||.|++ ++|++||++++|+|++|+||++|+|||+++|+|+++++++|+.+++++.+++++++| |+++++|+.+++
T Consensus 197 ~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~~ 272 (356)
T 1wn1_A 197 PHHEPGE---RKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVRE-GIKAKDVDSRAR 272 (356)
T ss_dssp TTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBT-TSBHHHHHHHHH
T ss_pred ccCCCCC---CeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHH
Confidence 9999965 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHcCC--CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCCCCCC
Q 009507 389 SSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRF 466 (533)
Q Consensus 389 ~~l~~~G~--~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~~~~~ 466 (533)
+.+++.|+ +|.|++||||| +++||.|. ++. +++.+|+||||||+|||+|.+|.+|+||||+|+||++
T Consensus 273 ~~~~~~g~~~~~~h~~GHgiG--l~~he~p~-i~~--~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt~~------ 341 (356)
T 1wn1_A 273 EVISKAGYGEYFIHRTGHGLG--LDVHEEPY-IGP--DGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEG------ 341 (356)
T ss_dssp HHHHTTTCGGGCCSCSEEECS--SSSSEEEE-EST--TCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETT------
T ss_pred HHHHHcCCcccCCCCCcccCC--CccCCCcc-cCC--CCCCCcCCCCEEEECCeeEeCCCcEEEEeeEEEEeCC------
Confidence 99999999 68999999999 99999997 653 3678999999999999999999999999999999998
Q ss_pred CCcccccceecccCCCCC
Q 009507 467 GGVSYLGFEKLTFVPIQT 484 (533)
Q Consensus 467 ~~~~~lg~e~LT~~P~~~ 484 (533)
|+|.||.+|.+.
T Consensus 342 ------g~e~Lt~~p~~l 353 (356)
T 1wn1_A 342 ------KGRRLTKAEREL 353 (356)
T ss_dssp ------EEEESCCCCCSC
T ss_pred ------ccEECCCCCCcc
Confidence 999999999543
No 7
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=4e-66 Score=536.50 Aligned_cols=340 Identities=23% Similarity=0.269 Sum_probs=300.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEE-EEEecCceEEEEeCCCCCHHHHhhhhcCCeEE
Q 009507 76 ASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAY-LIVEMDRAKLFVDDSKVTPDVMDHLKNAGVEL 154 (533)
Q Consensus 76 ~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~-liv~~~~~~Lfv~~~~~~~~~~~~l~~~~v~v 154 (533)
.+|++++|+.|+++++|++++++++|++||||+++.+ .+| ++|+.++..||++... .++ +.. .++++
T Consensus 5 ~~R~~~l~~~m~~~~~da~li~~~~n~~yltg~~~~~-------~~~~llv~~~~~~l~~~~~~--~~~-~~~--~~~~v 72 (351)
T 1wy2_A 5 NEKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLA-------GGYILITGESATLYVPELEY--EMA-KEE--SNIPV 72 (351)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCSS-------CCEEEEETTEEEEEEEHHHH--HHH-HHH--CSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCceEecCCCCCC-------CcEEEEEECCCcEEEECchH--HHH-hhc--CCCeE
Confidence 5899999999999999999999999999999998865 146 8888888889987643 333 222 35677
Q ss_pred eeCccHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchhhc
Q 009507 155 RPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKA 234 (533)
Q Consensus 155 ~~y~~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lra 234 (533)
..|+.+ +.+.++..+.++||+| +.++...++.|.+.+ |..+++++.+++..+|+
T Consensus 73 ~~~~~~-~~l~~~l~~~~~ig~e-~~~~~~~~~~l~~~~------------------------~~~~~~~~~~~i~~~r~ 126 (351)
T 1wy2_A 73 EKFKKM-DEFYKALEGIKSLGIE-SSLPYGFIEELKKKA------------------------NIKEFKKVDDVIRDMRI 126 (351)
T ss_dssp EEESSH-HHHHHHHTTCSEEEEC-TTCBHHHHHHHHHHS------------------------CCCEEEECHHHHHHHHT
T ss_pred EEeCcH-HHHHHHHccCCEEEEc-CcCCHHHHHHHHhhC------------------------CCCeEEEcHHHHHHHHh
Confidence 777653 4444443345799999 889999998887643 23367888999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCC
Q 009507 235 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPE 314 (533)
Q Consensus 235 vK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~ 314 (533)
+||++||+.||+|+++++.|+..+++++ ++|+||.|+++.++... ...|+.+.+|++|+++|+|++++||.|+
T Consensus 127 iK~~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~-~~~g~~~~~f~~iv~~g~n~~~~H~~~~ 199 (351)
T 1wy2_A 127 IKSEKEIKIIEKACEIADKAVMAAIEEI------TEGKKEREVAAKVEYLM-KMNGAEKPAFDTIIASGYRSALPHGVAS 199 (351)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGGSTTCBCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHH-HHcCCCCCCCCCEEEEccccccccCCCC
Confidence 9999999999999999999999888776 89999999999999865 4577778899999999999999999997
Q ss_pred CCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHc
Q 009507 315 PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI 394 (533)
Q Consensus 315 ~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~ 394 (533)
+ ++|++||++++|+|++|+||++|+|||+++|+|+++++++|+.|++++.+++++++| |+++++|+.++|+++++.
T Consensus 200 ~---~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~ 275 (351)
T 1wy2_A 200 D---KRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKP-GITAKELDSIARNIIAEY 275 (351)
T ss_dssp S---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHT
T ss_pred C---cccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHc
Confidence 5 999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CC--CCcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeecCCCCCCCCcccc
Q 009507 395 GL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEVGTPNRFGGVSYL 472 (533)
Q Consensus 395 G~--~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~~~~~~~~~~~~l 472 (533)
|+ +|.|++||||| +++||+|. ++. +++.+|+||||||+|||+|.+|.+|+||||+|+|| +
T Consensus 276 g~~~~~~h~~GHgiG--l~~hE~p~-i~~--~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt-~------------ 337 (351)
T 1wy2_A 276 GYGEYFNHSLGHGVG--LEVHEWPR-VSQ--YDETVLREGMVITIEPGIYIPKIGGVRIEDTILIT-K------------ 337 (351)
T ss_dssp TCGGGCCSCSEEECS--SSSSEEEE-EST--TCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE-T------------
T ss_pred CCcccCCCCcccccC--CCcCCCCc-cCC--CCCCCcCCCCEEEECCEEEeCCCCeEEEeeEEEEC-C------------
Confidence 98 58999999999 99999996 653 36789999999999999999999999999999999 8
Q ss_pred cce-ecccCCC
Q 009507 473 GFE-KLTFVPI 482 (533)
Q Consensus 473 g~e-~LT~~P~ 482 (533)
|+| .||.+|.
T Consensus 338 G~e~~Lt~~p~ 348 (351)
T 1wy2_A 338 NGSKRLTKTER 348 (351)
T ss_dssp TEEEESCCSCS
T ss_pred CceecCCCCCc
Confidence 999 9999884
No 8
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=3.6e-64 Score=531.42 Aligned_cols=365 Identities=16% Similarity=0.122 Sum_probs=311.5
Q ss_pred cccCcCHHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhhh
Q 009507 69 KYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLK 148 (533)
Q Consensus 69 ~~~g~~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l~ 148 (533)
.|+.+++++|+++||+.|+++++|++|+++++|++||+|++|++. ..| ++++|+.+++.||++.........+ +.
T Consensus 18 ~~~~~e~~~Rl~~Lr~~m~~~~lDa~li~~~~ni~yltgf~~s~~-~~p---~~llV~~~~~~l~~~~~~~~~a~~~-~~ 92 (402)
T 1kp0_A 18 PFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSGWLYCYF-GRK---YAZVIBZVKAVTISKGIDGGMPWRR-SF 92 (402)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTTHHHHH-CS
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEcCCCCceEecCCCCCCC-Cce---EEEEEeCCCCEEEeccchhhhhHHh-cc
Confidence 467788999999999999999999999999999999999998754 345 6889999999999997655543333 32
Q ss_pred cCCeEEeeC--ccHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccC
Q 009507 149 NAGVELRPY--NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRT 226 (533)
Q Consensus 149 ~~~v~v~~y--~~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 226 (533)
...+.+.+| ....+.|.++....++||+|.+.++...++.|.+.+ ++.++++..
T Consensus 93 ~~~v~~~~~~~~~~~~~l~~~l~~~~~igvd~~~~~~~~~~~l~~~l------------------------~~~~~v~~~ 148 (402)
T 1kp0_A 93 GBNIVYTDWKRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKAL------------------------PGTEFVDVG 148 (402)
T ss_dssp SEEEEECSSSTTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHS------------------------TTCEEEECH
T ss_pred CcceEeccccccCHHHHHHHHhccCCEEEEecCCCCHHHHHHHHHhC------------------------CCCEEEECH
Confidence 223444455 345667777654567999999989999998887643 245678888
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhC--CC-CCCCC--CeEEE
Q 009507 227 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQS--GF-LDTSF--DTISG 301 (533)
Q Consensus 227 ~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~--g~-~~~sf--~~i~~ 301 (533)
+++..+|++||+.||+.||+|+++++.|+.++++++ ++|+||.|+++.++++..+.. ++ ...+| ++|++
T Consensus 149 ~~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~iv~ 222 (402)
T 1kp0_A 149 ZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAI------SAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWFQ 222 (402)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEEE
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCcHHHHHHHHHHHHHHhcccccCcccccCccceee
Confidence 999999999999999999999999999999988877 899999999999987644321 11 12223 35899
Q ss_pred ecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcc
Q 009507 302 SGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGF 381 (533)
Q Consensus 302 ~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~ 381 (533)
+|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++++++|+.|++++.+++++++| |++++
T Consensus 223 ~g~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~ 298 (402)
T 1kp0_A 223 SGINTDGAHNPVTB---RVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKP-GARCK 298 (402)
T ss_dssp EGGGGGSTTCCEEC---CBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHH
T ss_pred cccccccccCCCCC---cccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHH
Confidence 99999999999875 999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred hHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCCCCC--cCCCCccccCCCEEecCcceeec----CcceEEEEE
Q 009507 382 VLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISF--RYGNMTPLVEGMIVSNEPGYYED----HAFGIRIEN 453 (533)
Q Consensus 382 ~ld~~ar~~l~~~G~~--~~h~~GHGvG~~l~vhE~P~~i~~--~~~~~~~L~~GMv~siEPg~y~~----g~~GiriEd 453 (533)
+|+.++++.+++.|+. +.|++||||| +.+||.|..++. .++++.+|+||||||+|||+|.+ |.+|+|+||
T Consensus 299 ~i~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~~G~ried 376 (402)
T 1kp0_A 299 DIASELNBMYRZWDLLRYRTFGYGHSFG--VLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBPEGEPGAGGYREHD 376 (402)
T ss_dssp HHHHHHHHHHHHTTCGGGBCSCSCBBCE--EEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEECTTSTTCEEEECBE
T ss_pred HHHHHHHHHHHHcCCCeecCCCcccccC--CccccCCcccCcccCCCCCCccCCCcEEEECCceeecCccCCCCcEEEEE
Confidence 9999999999999995 8899999999 899999875432 22367899999999999999999 889999999
Q ss_pred eEEEeecCCCCCCCCcccccceecccCCCCCCc
Q 009507 454 LLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKL 486 (533)
Q Consensus 454 ~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~l 486 (533)
+++||++ |+|.||.+|.+.++
T Consensus 377 ~v~Vt~~------------g~e~Lt~~p~~~~~ 397 (402)
T 1kp0_A 377 ILVIKEN------------BTENITGFPFGPEH 397 (402)
T ss_dssp EEEEETT------------EEEECCCSCCSTTT
T ss_pred EEEEcCC------------cceECCCCCCchHH
Confidence 9999998 99999999988765
No 9
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=1.5e-64 Score=544.34 Aligned_cols=382 Identities=13% Similarity=0.156 Sum_probs=316.3
Q ss_pred ccccCcCHHHHHHHHHHHHH--HcCCCEEEEccCC----cc--------ccccCcccCCCCCCcceeEEEEEecCceEEE
Q 009507 68 LKYAGLDVASKLSSLRSDLV--DAGSSAIVISMLD----EI--------AWLLNLRGSDVPHSPVMYAYLIVEMDRAKLF 133 (533)
Q Consensus 68 ~~~~g~~~~~Ki~~lr~~m~--~~g~dallls~~d----~I--------awL~n~rg~di~~~Pv~~s~liv~~~~~~Lf 133 (533)
..++++++++|+++||+.|+ ++++|++||++++ |+ +||||+++.+ ++++|+.++++||
T Consensus 6 ~~~~~~~~~~Rl~~Lr~~m~~~~~giDa~li~~~~~~~~~~y~~~~~~~~yLtGf~~~~--------~~lvVt~d~~~L~ 77 (467)
T 3biq_A 6 LNIDFDVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFPA--------TLIALVPGKVIII 77 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTTSTTCHHHHHHHHHHSSCCSS--------EEEEEETTEEEEE
T ss_pred cccCHHHHHHHHHHHHHHHHhhhcCCCEEEEEcCCCCCCCCCccchhhhhHhhCCCCCC--------EEEEEECCeEEEE
Confidence 35789999999999999999 9999999999998 99 6999998632 7999999999999
Q ss_pred EeCCCC--CHHHHh--hhh--cCCeEEeeC--c------cHHHHHHHHHhC-CCeEEEe-CCCchHHHHHHHHHHHhhhh
Q 009507 134 VDDSKV--TPDVMD--HLK--NAGVELRPY--N------SILSEIKSLAAQ-GAQLWLD-PSSVNAAIMNTYEIAIEKYL 197 (533)
Q Consensus 134 v~~~~~--~~~~~~--~l~--~~~v~v~~y--~------~~~~~l~~l~~~-~~~i~~d-~~~~~~~~~~~l~~~~~~~~ 197 (533)
++..+. ..++.+ .+. ..++++.+| . ...+.|.++... +++||++ .+.++...+..|.+.+....
T Consensus 78 ~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~ 157 (467)
T 3biq_A 78 TSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAV 157 (467)
T ss_dssp EEHHHHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHH
T ss_pred ECCcchHHHHHHhhhcccccCCCCeEEEEecccccccchhhHHHHHHHHHhhCCEEEEecCcccchhHHHHHHHHHHhhc
Confidence 986432 123443 222 114777777 3 234555554321 5689995 56778888888876542100
Q ss_pred hcccccccccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHH
Q 009507 198 TSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDV 277 (533)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~ei 277 (533)
. .++.++++..+++..+|+|||+.||+.||+|+++++.||.+++.+++..+..+.|+||.|+
T Consensus 158 ~------------------~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el 219 (467)
T 3biq_A 158 K------------------ENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKL 219 (467)
T ss_dssp H------------------HHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHH
T ss_pred c------------------cCCceeechHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccHHHH
Confidence 0 0135678888999999999999999999999999999999999999776633338999999
Q ss_pred HHHHHHHHHhh----CC-------------C----CCCCCCeEEEecCCcc-cccccCCCCCCcccCCCCeEEEEeceee
Q 009507 278 ADKLLEFRSKQ----SG-------------F----LDTSFDTISGSGANGA-IIHYKPEPGKCSVVDSKKLFLLDSGAQY 335 (533)
Q Consensus 278 a~~l~~~r~~~----~g-------------~----~~~sf~~i~~~G~n~a-~~hy~p~~~~~~~i~~gd~vliD~G~~y 335 (533)
++.++.++.+. .| + .+.+|++|+++|+|++ ++||.|++ ++|++||+|++|+|++|
T Consensus 220 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~~~~---~~l~~gd~v~iD~g~~~ 296 (467)
T 3biq_A 220 SDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTN---DQLYGNGCILASCGIRY 296 (467)
T ss_dssp HHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCCCSEEEEEEECEEE
T ss_pred HHHHHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCeEEecCCcceeeccCCCC---CccCCCCEEEEEEeEEE
Confidence 99999865430 22 2 3579999999999999 99999975 99999999999999999
Q ss_pred cCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHc-cCCCCCCcchHHHHHHHHHHHcC--C--CCcCccccccccCC
Q 009507 336 VDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQA-IFPQSTPGFVLDAFARSSLWKIG--L--DYRHGTGHGVGAAL 410 (533)
Q Consensus 336 ~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~-~~P~G~~~~~ld~~ar~~l~~~G--~--~~~h~~GHGvG~~l 410 (533)
+||++|+|||+++| |+++++++|++|++++.+++++ ++| |+++++|+.++|+++++.| + +|.|++||||| |
T Consensus 297 ~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiG--l 372 (467)
T 3biq_A 297 NNYCSNITRTFLID-PSEEMANNYDFLLTLQKEIVTNILKP-GRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIG--L 372 (467)
T ss_dssp TTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHTCCT-TCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--S
T ss_pred CCEEeeeeEEEEeC-CCHHHHHHHHHHHHHHHHHHHhCCcC-CCcHHHHHHHHHHHHHHhCcchhhcCCCCcccccc--c
Confidence 99999999999999 9999999999999999999999 999 9999999999999999997 4 58999999999 9
Q ss_pred ccccCCCCCCCcCCC-CccccCCCEEecCccee-e-----cCcceEEEEEeEEEe--ecCCCCCCCCcccccceecc-cC
Q 009507 411 NVHEGPQSISFRYGN-MTPLVEGMIVSNEPGYY-E-----DHAFGIRIENLLYVK--EVGTPNRFGGVSYLGFEKLT-FV 480 (533)
Q Consensus 411 ~vhE~P~~i~~~~~~-~~~L~~GMv~siEPg~y-~-----~g~~GiriEd~v~Vt--~~~~~~~~~~~~~lg~e~LT-~~ 480 (533)
++||.|..++.+ + +.+|+||||||+|||+| . +|.+|+||||+|+|| ++ |+|.|| .+
T Consensus 373 ~~hE~p~~~~~~--~~~~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt~~~~------------G~e~Lt~~~ 438 (467)
T 3biq_A 373 EFRDSNFILNVK--NDYRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIPLDET------------EPPRFLTNY 438 (467)
T ss_dssp SSCCGGGBSSTT--CCSCCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECCSSTT------------SCCEESCCS
T ss_pred ccccCCccCCCC--CCCCccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEecCCC------------CcEEecccC
Confidence 999999756543 6 78999999999999999 7 889999999999999 76 999999 99
Q ss_pred CCCCCccchhcCCHHH
Q 009507 481 PIQTKLVDLSLLSAAE 496 (533)
Q Consensus 481 P~~~~li~~~ll~~~e 496 (533)
|.+..+|+..|++++|
T Consensus 439 p~~~~~i~~~~~~~~e 454 (467)
T 3biq_A 439 TKAKSQISFYFNNEEE 454 (467)
T ss_dssp CCCHHHHEECC-----
T ss_pred CCCHHHHHHHHhcccc
Confidence 9999999999999888
No 10
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=2.1e-62 Score=517.52 Aligned_cols=371 Identities=16% Similarity=0.098 Sum_probs=305.0
Q ss_pred ccccccccccCcCHHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeE-EEEEecCceEEEEeCCCCC
Q 009507 62 PIRVHALKYAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYA-YLIVEMDRAKLFVDDSKVT 140 (533)
Q Consensus 62 ~i~~~~~~~~g~~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s-~liv~~~~~~Lfv~~~~~~ 140 (533)
|-...+..|+|+++++|++++|+.|+++++|++|+++++|++||+|+.. +|++.. +++|+.++.+||++.....
T Consensus 10 ~~~~~~~~~~~~e~~~R~~~l~~~m~~~~~da~li~~~~ni~yltg~~~-----~~~~~~~~llv~~~~~~l~~~~~~~~ 84 (401)
T 1chm_A 10 NGDKVRSTFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLY-----CSFGRPYALVVTEDDVISISANIDGG 84 (401)
T ss_dssp CSCCCCCSSCHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCC-----CCTTCCCEEEECSSCEEEEEEGGGTT
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcccceeeCCCCc-----CCCCCeEEEEEecCCCEEEecccchh
Confidence 3344566799999999999999999999999999999999999998864 333333 3457888888898754443
Q ss_pred HHHHhhhhcCCeEEeeC--ccHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCC
Q 009507 141 PDVMDHLKNAGVELRPY--NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSG 218 (533)
Q Consensus 141 ~~~~~~l~~~~v~v~~y--~~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (533)
....+.+....+.+.+| .++.+.|+++....++|++|.+.+++..++.|.+.+ |
T Consensus 85 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~~~i~ve~~~~~~~~~~~l~~~~------------------------~ 140 (401)
T 1chm_A 85 QPWRRTVGTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARY------------------------P 140 (401)
T ss_dssp HHHHHCCSSEEEEECTTSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHC------------------------T
T ss_pred hHHHhhcccceeeeccccccCHHHHHHHHhccCCeEEEecCCCCHHHHHHHHhhC------------------------C
Confidence 32333222122344443 456777777754457899999889999998887643 3
Q ss_pred CCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhh---CCCCCCC
Q 009507 219 GPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQ---SGFLDTS 295 (533)
Q Consensus 219 ~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~---~g~~~~s 295 (533)
+.++++..+++..+|+|||++||+.||+|+.+++.++..+++.+ ++|+||.|+++.+++..... ......+
T Consensus 141 ~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~tE~el~~~~~~~~~~~~~~~~~~~~~ 214 (401)
T 1chm_A 141 DAELVDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEAL------GDQVPEYEVALHATQAMVRAIADTFEDVEL 214 (401)
T ss_dssp TCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHHHHHCSSCCB
T ss_pred CCEEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCcHHHHHHHHHHHHHHhccccCCCccc
Confidence 56788999999999999999999999999999999888776655 89999999999887642221 1111245
Q ss_pred CCe--EEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 009507 296 FDT--ISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAI 373 (533)
Q Consensus 296 f~~--i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~ 373 (533)
|++ ++++|.|++.+||.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++|+++|+.|++++.++++++
T Consensus 215 ~~~~~~~~~g~n~~~~H~~~~~---~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~a~~~~i~~~ 291 (401)
T 1chm_A 215 MDTWTWFQSGINTDGAHNPVTT---RKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLI 291 (401)
T ss_dssp CCCEEEEEEGGGGGSTTCCEES---CBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcceeeeecccccccccCCCC---CccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 776 47999999999999865 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCCC--CCcCCCCccccCCCEEecCcceeec----C
Q 009507 374 FPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSI--SFRYGNMTPLVEGMIVSNEPGYYED----H 445 (533)
Q Consensus 374 ~P~G~~~~~ld~~ar~~l~~~G~~--~~h~~GHGvG~~l~vhE~P~~i--~~~~~~~~~L~~GMv~siEPg~y~~----g 445 (533)
+| |+++++|+.++++.+++.|+. +.|++||||| +.+||.|..+ +...+++.+|+||||||+|||+|.+ |
T Consensus 292 ~p-G~~~~~v~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~h~~~~~~g~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~g 368 (401)
T 1chm_A 292 KP-GARCSDIARELNEIFLKHDVLQYRTFGYGHSFG--TLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGLPG 368 (401)
T ss_dssp CT-TCBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCS--BEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEEECTTSTT
T ss_pred CC-CCcHHHHHHHHHHHHHHcCCCcccCCCCCcccC--ccCCccccccCccccCCCCCccCCCCEEEEcCeeeeccccCC
Confidence 99 999999999999999999993 6799999999 8899977532 2233467899999999999999998 8
Q ss_pred cceEEEEEeEEEeecCCCCCCCCcccccceecccCCCCCC
Q 009507 446 AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTK 485 (533)
Q Consensus 446 ~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~ 485 (533)
.+|+|+||+++||++ |+|.||.+|.+.+
T Consensus 369 ~~GvriEd~vlVt~~------------G~e~LT~~p~~~~ 396 (401)
T 1chm_A 369 AGGYREHDILIVNEN------------GAENITKFPYGPE 396 (401)
T ss_dssp CEEEECBEEEEEETT------------EEEECCCSCCSHH
T ss_pred CCeEEEeeeEEECCC------------cceECCCCCCChh
Confidence 899999999999998 9999999996643
No 11
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=1.8e-62 Score=524.94 Aligned_cols=371 Identities=14% Similarity=0.176 Sum_probs=304.1
Q ss_pred ccccCcCHHHHHHHHHHHHHH--------cCCCEEEEccCC----c--------cccccCcccCCCCCCcceeEEEEEec
Q 009507 68 LKYAGLDVASKLSSLRSDLVD--------AGSSAIVISMLD----E--------IAWLLNLRGSDVPHSPVMYAYLIVEM 127 (533)
Q Consensus 68 ~~~~g~~~~~Ki~~lr~~m~~--------~g~dallls~~d----~--------IawL~n~rg~di~~~Pv~~s~liv~~ 127 (533)
..|+++++.+|+++||+.|++ +++|++||++++ + ++||||+++.+ ++++++.
T Consensus 6 ~~~~~~~~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d~~~~y~q~~~~~~yLtG~~~~~--------~~lvi~~ 77 (444)
T 3cb6_A 6 YEIDEITFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLLGYEFPS--------TLILLEK 77 (444)
T ss_dssp CCCCHHHHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCCHHHHHHHHHHSSCCSS--------EEEEEET
T ss_pred CCcCHHHHHHHHHHHHHHhhhcCcccccccCCCEEEEEeCCCCCCCCcccchhhhHHHhCCCCCC--------EEEEEeC
Confidence 458899999999999999998 999999999997 6 79999998765 7899999
Q ss_pred CceEEEEeCCC--CCHHHH-hhhhcCCeEEeeC-cc------HHHHHHH-HHhCCCeEEEeC-CCchHHHHHHHHHHHhh
Q 009507 128 DRAKLFVDDSK--VTPDVM-DHLKNAGVELRPY-NS------ILSEIKS-LAAQGAQLWLDP-SSVNAAIMNTYEIAIEK 195 (533)
Q Consensus 128 ~~~~Lfv~~~~--~~~~~~-~~l~~~~v~v~~y-~~------~~~~l~~-l~~~~~~i~~d~-~~~~~~~~~~l~~~~~~ 195 (533)
++++||++..+ ....+. ..+....+++..| .+ ..+.+.+ +....++||+++ +..+...+..+...+..
T Consensus 78 ~~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~ig~~~~~~~~~~~~~~l~~~l~~ 157 (444)
T 3cb6_A 78 HRITILTSVNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEP 157 (444)
T ss_dssp TEEEEEEEHHHHTTTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTT
T ss_pred CcEEEEEcCchHHHHhhhhccccCCccEEEEecccccccCHHHHHHHHHHHHhcCCEEEEeccccchhHHHHHHHHHHhh
Confidence 89999998542 223443 3332123566665 31 1223332 322356899986 55666666555543311
Q ss_pred hhhcccccccccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCCC--c
Q 009507 196 YLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALA-QFWVWLEEEIHNGAK--L 272 (533)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~-~~~~~l~~~i~~~~g--~ 272 (533)
. .++.++++..+++..+|+|||+.||+.||+|+++++.|+. .++.|+.+.+ ++| +
T Consensus 158 ~--------------------~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i--~~G~~~ 215 (444)
T 3cb6_A 158 V--------------------KSEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYI--DQGKKI 215 (444)
T ss_dssp T--------------------GGGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH--HHTCCC
T ss_pred c--------------------cCCceEeecHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccc
Confidence 0 0235678889999999999999999999999999999999 7888888777 677 9
Q ss_pred CHHHHHHHHHHHHHhh-------CC---C----CCCCCCeEEEecCCcc-cccccCCCCCCcccCCCCeEEEEeceeecC
Q 009507 273 TEVDVADKLLEFRSKQ-------SG---F----LDTSFDTISGSGANGA-IIHYKPEPGKCSVVDSKKLFLLDSGAQYVD 337 (533)
Q Consensus 273 tE~eia~~l~~~r~~~-------~g---~----~~~sf~~i~~~G~n~a-~~hy~p~~~~~~~i~~gd~vliD~G~~y~g 337 (533)
||.++++.++....+. .| + .+.+|++|+++|+|++ ++||.|++ ++|+ ||+|++|+|++|+|
T Consensus 216 te~el~~~~~~~~~~~~~~~g~~~ga~~~~~~~~~~~f~~iv~~g~n~~~~~H~~~~~---~~l~-gd~v~iD~g~~~~g 291 (444)
T 3cb6_A 216 THSKFSDQMESLIDNEAFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDD---RNLH-GDVVLCSLGFRYKS 291 (444)
T ss_dssp BHHHHHHHHHGGGGCHHHHTCGGGCCTTCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCC-SSEEEEEECEEETT
T ss_pred CHHHHHHHHHHHHHHhccccccccccccccccccccccCceEeccCCcCceeccCCCC---Cccc-CCEEEEEEeEeeCC
Confidence 9999999998754321 12 2 2579999999999999 99999875 8998 99999999999999
Q ss_pred cccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHc--CC--CCcCccccccccCCccc
Q 009507 338 GTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI--GL--DYRHGTGHGVGAALNVH 413 (533)
Q Consensus 338 y~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~--G~--~~~h~~GHGvG~~l~vh 413 (533)
|++|+|||+++| |+++|+++|+.|++++.+++++++| |+++++|+.++++++++. |+ +|.|++||||| +++|
T Consensus 292 y~sD~tRT~~v~-~~~~~~~~y~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~h 367 (444)
T 3cb6_A 292 YCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLFEYCRD-GAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIG--IEFR 367 (444)
T ss_dssp EECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS--SSSC
T ss_pred EeeeeeEEEEec-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHhhhhhhHhhcccccccccC--cccc
Confidence 999999999998 8999999999999999999999999 999999999999999998 45 48999999999 9999
Q ss_pred cCCCCCCCcCCCCccccCCCEEecCccee-e---------cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCCC
Q 009507 414 EGPQSISFRYGNMTPLVEGMIVSNEPGYY-E---------DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 483 (533)
Q Consensus 414 E~P~~i~~~~~~~~~L~~GMv~siEPg~y-~---------~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~ 483 (533)
|.|..++. +++.+|+||||||+|||+| . +|.+|+||||+|+||++ |+|.||.+|.+
T Consensus 368 e~p~~~~~--~~~~~l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~~------------g~e~Lt~~p~~ 433 (444)
T 3cb6_A 368 ESSLLVNA--KNPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITRS------------DPIVFTDSPKA 433 (444)
T ss_dssp BGGGCCST--TCCCBCCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCSS------------SCEETTCCCCS
T ss_pred CCccccCC--CCCcccCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEECCC------------CceecccCCCc
Confidence 99865654 3678999999999999999 5 78899999999999998 99999999966
Q ss_pred CCccchh
Q 009507 484 TKLVDLS 490 (533)
Q Consensus 484 ~~li~~~ 490 (533)
...|+..
T Consensus 434 l~~Ie~~ 440 (444)
T 3cb6_A 434 QGDISYF 440 (444)
T ss_dssp HHHHEEC
T ss_pred HHHHHhh
Confidence 6555533
No 12
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=4.2e-63 Score=529.75 Aligned_cols=360 Identities=18% Similarity=0.127 Sum_probs=298.4
Q ss_pred ccCcCHHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCC--CCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhh
Q 009507 70 YAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSD--VPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHL 147 (533)
Q Consensus 70 ~~g~~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~d--i~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l 147 (533)
+..+.+++|++++|+.|+++|+|++||++++||+||||++|.+ .+++|. ++++|+.++..+|++..... .+..+.
T Consensus 74 ~~~~~~~~Rl~rlr~~m~~~glDalli~~~~ni~YlTGf~g~~~~~~~~~~--~~llV~~dg~~~l~d~r~~~-~l~~~~ 150 (470)
T 4b28_A 74 DLAAMRRFRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPF--RATLLCADGYMVMWDYKNSP-FLSEFN 150 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHCCCSSHHHHHHSCC--CEEEEETTSCEEEECCTTCG-GGGTTC
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCEEEEcCCCcceeecCCCCCcccccCCCC--EEEEEECCCCEEEEecchhh-hhhhhh
Confidence 3456788999999999999999999999999999999999865 345554 68999988777777753221 111111
Q ss_pred hcCCeEEeeC--------------------ccHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhccccccccc
Q 009507 148 KNAGVELRPY--------------------NSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKT 207 (533)
Q Consensus 148 ~~~~v~v~~y--------------------~~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 207 (533)
. .--+++++ +.+.+.|+++....++||+|.. +...+..|.+
T Consensus 151 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~igve~~--~~~~~~~L~~---------------- 211 (470)
T 4b28_A 151 P-LVREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKV--MLHGLRALQA---------------- 211 (470)
T ss_dssp T-TSCEEECCCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHSTTCCEEEESSC--CHHHHHHHHH----------------
T ss_pred h-HHHHHHhcCCeeeeccCccccccchhHHHHHHHHHHHhCccCceeeeCcc--hHHHHHHHHc----------------
Confidence 1 00122221 1223344444333679999975 4566777654
Q ss_pred ccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc-----CHHHHHHHHH
Q 009507 208 KMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKL-----TEVDVADKLL 282 (533)
Q Consensus 208 ~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~-----tE~eia~~l~ 282 (533)
++++++++.+++..+|+|||++||+.||+|+++++.|+.++++++ ++|+ ||.|+++.++
T Consensus 212 ----------~~~~~vd~~~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~~~~~~tE~el~~~l~ 275 (470)
T 4b28_A 212 ----------QGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFA------RSKVGDGVTCENDIWAILH 275 (470)
T ss_dssp ----------TTCEEEEHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHTTSSCCBHHHHHHHHH
T ss_pred ----------CCCEEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCHHHHHHHHH
Confidence 246789999999999999999999999999999999999999998 5677 9999999999
Q ss_pred HHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcccCCCCeEEEEecee-ecCcccceeecCcCC--CCCHHHHHHH
Q 009507 283 EFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQ-YVDGTTDITRTVHFG--EPTAREKECF 359 (533)
Q Consensus 283 ~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~-y~gy~tDitRT~~~G--~p~~e~~~~y 359 (533)
.+.. ..|.. .+|.+|+++|+|++.+||.|++ ++|++||+|++|+|++ |.||++|+||||++| +|+++++++|
T Consensus 276 ~~~~-~~G~~-~~~~~ivasG~n~~~~H~~~~~---~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~~y 350 (470)
T 4b28_A 276 SENV-RRGGE-WIETRLLASGPRSNPWFQECGP---RVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAM 350 (470)
T ss_dssp HHHH-TTTCC-EESCCCEEEGGGGSSTTCCCCS---CBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHHHH
T ss_pred HHHH-HcCCC-cCCCceeEEcCccccCCCCCCC---ccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHHHH
Confidence 8644 34543 5788999999999999999865 9999999999999998 899999999999999 6999999999
Q ss_pred HHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCccccccccCCccccCCCCCCCc-----CCCCccccCCCE
Q 009507 360 TRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFR-----YGNMTPLVEGMI 434 (533)
Q Consensus 360 ~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~~GHGvG~~l~vhE~P~~i~~~-----~~~~~~L~~GMv 434 (533)
+.|++++.+++++++| |+++.+|+.++|+++++.|.++.|++||||| + +||+|. |+.. .+++.+|+||||
T Consensus 351 ~~v~~a~~a~i~~ikp-G~~~~di~~~ar~~i~~~~~~~~~~~GHGIG--l-~HE~P~-i~~~~~~~~~~~~~~L~~GMV 425 (470)
T 4b28_A 351 QHGVEHIRTNMEMLKP-GVMIPELSANTHVLDAKFQKQKYGCLMHGVG--L-CDEWPL-VAYPDHAVAGAYDYPLEPGMT 425 (470)
T ss_dssp HHHHHHHHHHHHTCCT-TCBHHHHHHTCCCCCHHHHTTCCSCSEEEES--S-SEEEEE-ECCTTTCCTTSSCCBCCTTCE
T ss_pred HHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHhhhcCCCCccCCCC--c-CCCCCc-ccCccccccCCCCCEECCCCE
Confidence 9999999999999999 9999999999999999988887899999999 8 699996 6532 236789999999
Q ss_pred EecCcceee-cCcceEEEEEeEEEeecCCCCCCCCcccccceecccCCCCCCccch
Q 009507 435 VSNEPGYYE-DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVDL 489 (533)
Q Consensus 435 ~siEPg~y~-~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~li~~ 489 (533)
||+|||+|. +|.+||||||+|+||++ |+|.||.+|++.++|.+
T Consensus 426 ~tiEPgiy~~~g~~GvriEd~vlVte~------------G~e~LT~~p~~l~li~~ 469 (470)
T 4b28_A 426 LCVEALISEEGGDFSIKLEDQVLITED------------GYENLTKYPFDPALMGV 469 (470)
T ss_dssp EEEEEEEECTTCSCEEEEEEEEEECSS------------SEEECCCCCCCHHHHC-
T ss_pred EEEcCeeecCCCcEEEEEeeEEEEeCC------------cCeECCCCCCcHHhccC
Confidence 999999998 89999999999999998 99999999988877754
No 13
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=1.6e-60 Score=508.46 Aligned_cols=365 Identities=20% Similarity=0.261 Sum_probs=294.6
Q ss_pred cCcCHHHHHHHHHHHHHHcCCCEEEEccC---------------CccccccCcccCCCCCCcceeEEEEEec-----Cce
Q 009507 71 AGLDVASKLSSLRSDLVDAGSSAIVISML---------------DEIAWLLNLRGSDVPHSPVMYAYLIVEM-----DRA 130 (533)
Q Consensus 71 ~g~~~~~Ki~~lr~~m~~~g~dallls~~---------------d~IawL~n~rg~di~~~Pv~~s~liv~~-----~~~ 130 (533)
+++++++|++++++.|++.+ +++|++++ .|+.||||+... .++++++. +++
T Consensus 4 ~~~e~~~R~~~l~~~m~~~~-~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~~--------~~~lvi~~~~~~~~~~ 74 (440)
T 2v3z_A 4 SRQEFQRRRQALVEQMQPGS-AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEP--------EAVLVLIKSDDTHNHS 74 (440)
T ss_dssp CHHHHHHHHHHHHHHSCSSE-EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCS--------SCEEEEEECSSSCEEE
T ss_pred CHHHHHHHHHHHHHhcccCC-EEEEECCCccccCCCCCCcccCCCCEEEecCCCCC--------CEEEEEEecCCCCceE
Confidence 56789999999999999877 78888877 577888887532 26788864 468
Q ss_pred EEEEeCCCCCHHHH--------hhhhcCCe-EEeeCccHHHHHHHHHhCCCeEEEeCCCchH---HHHHHHHHHHhhhhh
Q 009507 131 KLFVDDSKVTPDVM--------DHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNA---AIMNTYEIAIEKYLT 198 (533)
Q Consensus 131 ~Lfv~~~~~~~~~~--------~~l~~~~v-~v~~y~~~~~~l~~l~~~~~~i~~d~~~~~~---~~~~~l~~~~~~~~~ 198 (533)
+||++......+++ .+....++ .+.+|+++.+.|+++....++|+++....+. ..+..+... .....
T Consensus 75 ~Lf~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l-~~~~~ 153 (440)
T 2v3z_A 75 VLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKL-RKGSR 153 (440)
T ss_dssp EEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHHHHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHH-HTCGG
T ss_pred EEEecCCCcccceecCCCCCHHHHHHhcCCCEEeeHHHHHHHHHHHHcCCCEEEEeCCcccchhHHHHHHHHHH-hhhcc
Confidence 99998654322221 01111233 5678999999998886555789988764321 111222211 00000
Q ss_pred cccccccccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHH
Q 009507 199 SNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVA 278 (533)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia 278 (533)
....++.++++..+++..+|+|||+.||+.||+|+++++.|+.++++++ ++|+||.+++
T Consensus 154 ---------------~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el~ 212 (440)
T 2v3z_A 154 ---------------QNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKC------RPGMFEYHLE 212 (440)
T ss_dssp ---------------GTCCCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHH
T ss_pred ---------------cccCCcceeeeHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHH
Confidence 0011456788999999999999999999999999999999999999887 8999999999
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcC-CCCCHHHHH
Q 009507 279 DKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPTAREKE 357 (533)
Q Consensus 279 ~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~-G~p~~e~~~ 357 (533)
+.++.... ..|+.+.+|++|+++|+|++++||.|++ ++|++||+|++|+|++|.||++|+|||+++ |+++++|++
T Consensus 213 ~~~~~~~~-~~G~~~~~f~~iv~~G~n~~~~H~~~~~---~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~~ 288 (440)
T 2v3z_A 213 GEIHHEFN-RHGARYPSYNTIVGSGENGCILHYTENE---CEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQRE 288 (440)
T ss_dssp HHHHHHHH-HTTCCEESSCCEEEEGGGGGSTTCCCCC---SBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHH
T ss_pred HHHHHHHH-HcCCCcCCCCCeEEEcCccccccCCCCC---ccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHHH
Confidence 99976433 4677788999999999999999999865 999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHH----HcCC----------------CCcCccccccccCCccccCCC
Q 009507 358 CFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLW----KIGL----------------DYRHGTGHGVGAALNVHEGPQ 417 (533)
Q Consensus 358 ~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~----~~G~----------------~~~h~~GHGvG~~l~vhE~P~ 417 (533)
+|+.|++++.+++++++| |+++.+|+.++++.+. +.|+ .|.|++||||| |++||.|.
T Consensus 289 ~y~~v~~a~~~~i~~~~p-G~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiG--l~~he~p~ 365 (440)
T 2v3z_A 289 IYDIVLESLETSLRLYRP-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLG--LDVHDVGV 365 (440)
T ss_dssp HHHHHHHHHHHHHHHCCT-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCS--SSSSCCSC
T ss_pred HHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCC--cccccCCC
Confidence 999999999999999999 9999999999998874 4443 47999999999 99999997
Q ss_pred CCCCcCCCCccccCCCEEecCcceeecC---------cceEEEEEeEEEeecCCCCCCCCcccccceecc-cCCCCCCcc
Q 009507 418 SISFRYGNMTPLVEGMIVSNEPGYYEDH---------AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLT-FVPIQTKLV 487 (533)
Q Consensus 418 ~i~~~~~~~~~L~~GMv~siEPg~y~~g---------~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT-~~P~~~~li 487 (533)
+... ++.+|+||||||+|||+|.++ .+||||||+|+||++ |+|.|| .+|++...|
T Consensus 366 -~~~~--~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt~~------------G~e~LT~~~p~~~~~I 430 (440)
T 2v3z_A 366 -YGQD--RSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVITET------------GNENLTASVVKKPEEI 430 (440)
T ss_dssp -CCGG--GCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEETT------------EEEESSTTSCCSHHHH
T ss_pred -cCCC--CCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEECCC------------cCeECCcccCCCHHHH
Confidence 4322 567899999999999999998 689999999999998 999999 599765555
Q ss_pred c
Q 009507 488 D 488 (533)
Q Consensus 488 ~ 488 (533)
+
T Consensus 431 e 431 (440)
T 2v3z_A 431 E 431 (440)
T ss_dssp H
T ss_pred H
Confidence 4
No 14
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=1.1e-59 Score=498.18 Aligned_cols=363 Identities=21% Similarity=0.273 Sum_probs=301.9
Q ss_pred cCHHHHHHHHHHHHHHcCC-------------CEEE-EccCCccccccCcccCCCCCCcceeEEEEEec----CceEEEE
Q 009507 73 LDVASKLSSLRSDLVDAGS-------------SAIV-ISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEM----DRAKLFV 134 (533)
Q Consensus 73 ~~~~~Ki~~lr~~m~~~g~-------------dall-ls~~d~IawL~n~rg~di~~~Pv~~s~liv~~----~~~~Lfv 134 (533)
+.+++|+++|.+.|.+.++ |... +....|+.||||+.+.+ +++++.. .+.+||+
T Consensus 4 ~~~~~RR~~l~~~l~~~~~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~--------~~~v~~~~~~~~~~~lfv 75 (427)
T 3ig4_A 4 KFFAQNRERLVNTLPDESITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPN--------VIFMLKKFGNSVEETLFI 75 (427)
T ss_dssp HHHHHHHHHHHTTSCSSEEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTT--------CEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHhCcCCCEEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCC--------EEEEEEccCCCceEEEEe
Confidence 4588999999999976543 3211 33335688999998776 5677754 2578999
Q ss_pred eC----------CCCCHHHHhhhhcCCe-EEeeCccHHHHHHHHHhC--CCeEEEeCC--------CchHHHHHHHHHHH
Q 009507 135 DD----------SKVTPDVMDHLKNAGV-ELRPYNSILSEIKSLAAQ--GAQLWLDPS--------SVNAAIMNTYEIAI 193 (533)
Q Consensus 135 ~~----------~~~~~~~~~~l~~~~v-~v~~y~~~~~~l~~l~~~--~~~i~~d~~--------~~~~~~~~~l~~~~ 193 (533)
+. .+...+..... .++ .+.+.+++.+.|.++... ..+|+++.+ ..+..+++.|.+.+
T Consensus 76 ~~~~~~~~~w~g~r~~~~~a~~~--~~~~~v~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~ 153 (427)
T 3ig4_A 76 EKSDPVMEKWVGKTVSNEEAEKI--SGIKKVIYLDSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQY 153 (427)
T ss_dssp CCCCTTGGGTTCCCCCHHHHHHH--HCCSEEEEGGGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHHC
T ss_pred cCCCccceEEeCCCCcHHHHHhc--CCCCEEEEhhhHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHhhC
Confidence 75 33443322222 245 567888898889887653 568999854 24556777776543
Q ss_pred hhhhhcccccccccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcC
Q 009507 194 EKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLT 273 (533)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~t 273 (533)
|+.++++....+..+|+|||+.||+.||+|+++++.|+.++++.+ ++|+|
T Consensus 154 ------------------------~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------~pG~t 203 (427)
T 3ig4_A 154 ------------------------PHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHA------KADMM 203 (427)
T ss_dssp ------------------------TTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC------CSSEE
T ss_pred ------------------------CCCeEeEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCC
Confidence 456788999999999999999999999999999999999988776 89999
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcC-CCCC
Q 009507 274 EVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHF-GEPT 352 (533)
Q Consensus 274 E~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~-G~p~ 352 (533)
|.|+++.++... ...|..+.+|++|+++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++ |+++
T Consensus 204 E~el~~~~~~~~-~~~G~~~~~f~~ivasG~n~~~~H~~~~~---~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s 279 (427)
T 3ig4_A 204 EYELEAQFDFTL-KSSGIKHHAFNTILASGKNATVLHYEDND---AQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFS 279 (427)
T ss_dssp HHHHHHHHHHHH-HHTTCCEESSCCEEEEGGGGGSTTCCCCC---SEECTTCEEEEEECEEETTEECCEEEEEETTSCCC
T ss_pred HHHHHHHHHHHH-HHcCCCCCCCCCEEEECccccccccCccc---ccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCC
Confidence 999999998754 35677788999999999999999999876 999999999999999999999999999999 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHc----CC---------CCcCccccccccCCccccCCCCC
Q 009507 353 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI----GL---------DYRHGTGHGVGAALNVHEGPQSI 419 (533)
Q Consensus 353 ~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~----G~---------~~~h~~GHGvG~~l~vhE~P~~i 419 (533)
++|+++|++|++++.+++++++| |+++.+|+.++++.+++. |+ .|.|++||||| |++||.|.
T Consensus 280 ~~~~~~y~~vl~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG--l~vhe~~~-- 354 (427)
T 3ig4_A 280 SRQKQIYNIVLNALKETTEIIKP-GLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG--LDTHDVGT-- 354 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCT-TCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS--SSSSCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC--cCCCcCCC--
Confidence 99999999999999999999999 999999999999999886 43 48999999999 99999774
Q ss_pred CCcCCCCccccCCCEEecCcceeecCcc-eEEEEEeEEEeecCCCCCCCCcccccceeccc-CCCCCCccchhcCCHHHH
Q 009507 420 SFRYGNMTPLVEGMIVSNEPGYYEDHAF-GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQTKLVDLSLLSAAEI 497 (533)
Q Consensus 420 ~~~~~~~~~L~~GMv~siEPg~y~~g~~-GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~-~P~~~~li~~~ll~~~e~ 497 (533)
+.+.+|+||||||+|||+|.++.+ ||||||+|+||++ |+|.||. +|.+.+.|. .+|...|+
T Consensus 355 ----~~~~~L~~GMV~tiEPgiy~~~~g~GvriEd~vlVt~~------------G~e~LT~~~pk~~~~IE-~~m~~~~~ 417 (427)
T 3ig4_A 355 ----YKDRVLEEGMVITIEPGLYIEEESIGIRIEDDILVTKD------------GHENLSKDIIREVEEIE-EFMRENNV 417 (427)
T ss_dssp ----CTTCBCCTTCEEEECCEEEEGGGTEEEECBEEEEECSS------------SEEETTTTSCCSHHHHH-HHHHHHCT
T ss_pred ----CCCCEeCCCCEEEECCEEEECCCceEEEEeeEEEEeCC------------cCeECCCCCCCCHHHHH-HHHccCcc
Confidence 256789999999999999999874 9999999999998 9999996 898877777 55689999
Q ss_pred HHHH
Q 009507 498 DWLN 501 (533)
Q Consensus 498 ~wln 501 (533)
.|||
T Consensus 418 ~~~~ 421 (427)
T 3ig4_A 418 NVKQ 421 (427)
T ss_dssp TC--
T ss_pred cccc
Confidence 9999
No 15
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=3.4e-54 Score=465.44 Aligned_cols=367 Identities=22% Similarity=0.266 Sum_probs=281.1
Q ss_pred ccccCcCHHHHHHHHHHHHHHcCC----CEEEEccC-----------------CccccccCcccCCCCCCcceeEEEEEe
Q 009507 68 LKYAGLDVASKLSSLRSDLVDAGS----SAIVISML-----------------DEIAWLLNLRGSDVPHSPVMYAYLIVE 126 (533)
Q Consensus 68 ~~~~g~~~~~Ki~~lr~~m~~~g~----dallls~~-----------------d~IawL~n~rg~di~~~Pv~~s~liv~ 126 (533)
..++-+++.+|+++|++.|++.+. +++|+.+. .|+.||||++..+ ++++|.
T Consensus 17 ~~i~~~e~~~Rr~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~--------~~~vi~ 88 (494)
T 2iw2_A 17 LKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPG--------CYGVID 88 (494)
T ss_dssp CCEETHHHHHHHHHHHHHHHHCTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSS--------CEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCC--------eEEEEE
Confidence 356778899999999999998754 58888442 3468999997544 466774
Q ss_pred --cCceEEEEeCCCCCHHHH--------hhhhcCCe-EEeeCccHHHHHHHHHhCCCeEEEe----CCCch---HHHHHH
Q 009507 127 --MDRAKLFVDDSKVTPDVM--------DHLKNAGV-ELRPYNSILSEIKSLAAQGAQLWLD----PSSVN---AAIMNT 188 (533)
Q Consensus 127 --~~~~~Lfv~~~~~~~~~~--------~~l~~~~v-~v~~y~~~~~~l~~l~~~~~~i~~d----~~~~~---~~~~~~ 188 (533)
.++++||++......+.+ .+....++ .+.+.+++.+.|+++. .+++++. .+... ...+..
T Consensus 89 ~~~~~~~L~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~i~~~~g~~~~~~~~~~~~~~~~ 166 (494)
T 2iw2_A 89 VDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQK--PSVLLTLRGVNTDSGSVCREASFDG 166 (494)
T ss_dssp TTTCCEEEEECCCCGGGTTTTCCCCCHHHHHHHHTCSEEEEGGGHHHHHHHTC--CSCEECCCCBCTTTCCBCCCCCCTT
T ss_pred ccCCeEEEEECCCCHHHhhhcCCCCCHHHHHHHhCCcccccHHHHHHHHHhcC--CCeEEEecCccccccccccHhhhhh
Confidence 368999997532211110 01101122 3567778888887763 4456552 11100 000000
Q ss_pred HHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 009507 189 YEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHN 268 (533)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~ 268 (533)
+. ....+.++....+..+|+|||+.||+.||+|+++++.|+.++++++
T Consensus 167 l~--------------------------~~~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i------ 214 (494)
T 2iw2_A 167 IS--------------------------KFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAV------ 214 (494)
T ss_dssp GG--------------------------GSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred hh--------------------------hccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc------
Confidence 00 0012334555678999999999999999999999999999998877
Q ss_pred CCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCC-CCCCcccCCCCeEEEEeceeecCcccceeecCc
Q 009507 269 GAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPE-PGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVH 347 (533)
Q Consensus 269 ~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~-~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~ 347 (533)
++|+||.|+++.++....+..|+...+|++|+++|+|++++||.++ ..++++|++||+|++|+|++|.||++|+||||+
T Consensus 215 ~~G~tE~el~~~~~~~~~~~~G~~~~~~~~iv~sG~n~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~ 294 (494)
T 2iw2_A 215 KVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFP 294 (494)
T ss_dssp CTTCBHHHHHHHHHHHHHHHHCCCEESSCCEEEEGGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEE
T ss_pred cCCCcHHHHHHHHHHHHHHhCCCCcCCCCceEEEcCccccccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEE
Confidence 8999999999999876554447778899999999999999999764 334699999999999999999999999999999
Q ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHH----cCC----------------CCcCcccccc
Q 009507 348 F-GEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWK----IGL----------------DYRHGTGHGV 406 (533)
Q Consensus 348 ~-G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~----~G~----------------~~~h~~GHGv 406 (533)
+ |+++++|+++|++|++++.+++++++| |+++.+|+.++++.+++ .|+ .|.|++||||
T Consensus 295 v~G~~s~~q~~~y~~v~~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgi 373 (494)
T 2iw2_A 295 ANGKFTADQKAVYEAVLRSSRAVMGAMKP-GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFL 373 (494)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBC
T ss_pred ECCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCC
Confidence 9 899999999999999999999999999 99999999999998865 353 3789999999
Q ss_pred ccCCccccCCCCC---------CC-cCCCCccccCCCEEecCcceeec--------------------------CcceEE
Q 009507 407 GAALNVHEGPQSI---------SF-RYGNMTPLVEGMIVSNEPGYYED--------------------------HAFGIR 450 (533)
Q Consensus 407 G~~l~vhE~P~~i---------~~-~~~~~~~L~~GMv~siEPg~y~~--------------------------g~~Gir 450 (533)
| |++||.|... .. ...+..+|+||||||||||+|.+ |.+|||
T Consensus 374 G--l~vHd~~~~~~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gGvR 451 (494)
T 2iw2_A 374 G--IDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVR 451 (494)
T ss_dssp S--SSSSCSCSSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEE
T ss_pred C--cccccCCCcccccccccccccccCCCCCEeCCCCEEEECCccccccccchhhccccccccccccchhhhhCCCCEEE
Confidence 9 9999953210 00 01246789999999999999974 778999
Q ss_pred EEEeEEEeecCCCCCCCCcccccceecccCCCCCCccchhc
Q 009507 451 IENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQTKLVDLSL 491 (533)
Q Consensus 451 iEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~~li~~~l 491 (533)
|||+|+||++ |+|+||.+|.+...|+..|
T Consensus 452 iED~vlVte~------------G~e~LT~~p~~~~~ie~~m 480 (494)
T 2iw2_A 452 IEEDVVVTDS------------GIELLTCVPRTVEEIEACM 480 (494)
T ss_dssp CBEEEEECSS------------SEEECCCCCCSHHHHHHHH
T ss_pred eeeEEEEcCC------------cCeECCCCCCcHHHHHHHH
Confidence 9999999998 9999999997666565444
No 16
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=1.9e-53 Score=452.96 Aligned_cols=352 Identities=18% Similarity=0.186 Sum_probs=269.5
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCccccccC-----cccCC-CCC-Ccc---eeEEEEEecC-ceEEEEeCCC-CCH
Q 009507 74 DVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLN-----LRGSD-VPH-SPV---MYAYLIVEMD-RAKLFVDDSK-VTP 141 (533)
Q Consensus 74 ~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n-----~rg~d-i~~-~Pv---~~s~liv~~~-~~~Lfv~~~~-~~~ 141 (533)
..+++.+|+++.|++.+.|+++|.+..++.|++| ||... ..| +++ .-+++++..+ ++.||+...+ +-.
T Consensus 11 ~~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~~~~~~l~~~~~~d~w~ 90 (451)
T 3rva_A 11 HIEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWH 90 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECSSSCCEEEEECCCCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCcccCCCceEEeccCCCCCEEEEEecCCCeEEEeeccHHhhh
Confidence 3567788999999999999999999999999988 55421 101 111 1267777543 6677775421 000
Q ss_pred H----HHhh-hhcCCe-EEeeCccHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCC
Q 009507 142 D----VMDH-LKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTG 215 (533)
Q Consensus 142 ~----~~~~-l~~~~v-~v~~y~~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (533)
. ..+. ....+| .+.+.+++.+.|..+ ..++++.......+.+..+
T Consensus 91 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~~~~~~g~~~~~~~~~~~-------------------------- 141 (451)
T 3rva_A 91 KVPPEPNDFWTDSFDIKLLQQADAVEKFLPYD---KSRFAYVGEYIEVAKALGF-------------------------- 141 (451)
T ss_dssp CCCCSCCSTTGGGSEEEEESSGGGGGGGSCSC---GGGEEEESSCHHHHHHHTC--------------------------
T ss_pred ccccCcchhHHhccCeEEEecHHHHHHHHhhc---cCceEEEccCcCHHHhhhh--------------------------
Confidence 0 0011 111233 334445555555432 2245555433332111000
Q ss_pred CCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCC
Q 009507 216 QSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTS 295 (533)
Q Consensus 216 ~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~s 295 (533)
...++++..+.+..+|+|||+.||+.||+|+++++.|+.++++.+ ++|+||.|+++.+.... ..|..+.+
T Consensus 142 --~~~~~~~~~~~l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i------~pG~tE~el~~~~~~~~--~~g~~~~~ 211 (451)
T 3rva_A 142 --DNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAF------REGKSEFDINLAYAAAS--RQGDNDVP 211 (451)
T ss_dssp --SCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTCCHHHHHHHHHHHH--TCCTTTSS
T ss_pred --cccCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh------hcCCCHHHHHHHHHHHH--HcCCCcCC
Confidence 123456778889999999999999999999999999999988877 79999999999876532 45667889
Q ss_pred CCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCC--CHHHHHHHHHHHHHHHHHHHcc
Q 009507 296 FDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEP--TAREKECFTRVLQGHIALDQAI 373 (533)
Q Consensus 296 f~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p--~~e~~~~y~~vl~~~~~~~~~~ 373 (533)
|++|+++|+|++++||.|++ .+.+++||+|+||+|++|+||++|+||||++|++ +++++++|++|++++.++++++
T Consensus 212 f~~IVasG~naa~~H~~~~~--~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~i 289 (451)
T 3rva_A 212 YTSIVALNEHASILHYMQCD--TVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSL 289 (451)
T ss_dssp SCCEEEEGGGGGCTTCCCCC--SSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEEECCcccccCCCCCC--CcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999976 2357999999999999999999999999999987 8899999999999999999999
Q ss_pred CCCCCCcchHHHHHHHHHH-----------------HcCC---CCcCccccccccCCccccCCCCCCCc-----------
Q 009507 374 FPQSTPGFVLDAFARSSLW-----------------KIGL---DYRHGTGHGVGAALNVHEGPQSISFR----------- 422 (533)
Q Consensus 374 ~P~G~~~~~ld~~ar~~l~-----------------~~G~---~~~h~~GHGvG~~l~vhE~P~~i~~~----------- 422 (533)
+| |+++.+|+.+|++.++ +.|+ .|+|++||||| |++||.|......
T Consensus 290 kP-G~~~~di~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiG--ldvHe~p~~~~~~~g~~~~~~~~~ 366 (451)
T 3rva_A 290 KP-GVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLG--LQVHDVGGLVNDDRGTPKPAPDDH 366 (451)
T ss_dssp CT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--SSSSCTTTTBSSTTCCBCCCCTTC
T ss_pred CC-CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCccccc--CCcccCcccccccccccccccccc
Confidence 99 9999999999999886 5566 58999999999 9999998632210
Q ss_pred --CCCCccccCCCEEecCcceeec-------------------------CcceEEEEEeEEEeecCCCCCCCCcccccce
Q 009507 423 --YGNMTPLVEGMIVSNEPGYYED-------------------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFE 475 (533)
Q Consensus 423 --~~~~~~L~~GMv~siEPg~y~~-------------------------g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e 475 (533)
..+..+|+||||||||||+|.+ |.+||||||+|+||++ |+|
T Consensus 367 ~~l~~~~~L~~GMV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~------------G~e 434 (451)
T 3rva_A 367 PFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRD------------KNE 434 (451)
T ss_dssp TTCCCCCBCCTTCEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------------CEE
T ss_pred ccCCCCCCcCCCCEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCC------------cce
Confidence 0246789999999999999983 6679999999999999 999
Q ss_pred ecccCC
Q 009507 476 KLTFVP 481 (533)
Q Consensus 476 ~LT~~P 481 (533)
+||..|
T Consensus 435 ~LT~~~ 440 (451)
T 3rva_A 435 NMTRDL 440 (451)
T ss_dssp EHHHHT
T ss_pred ECCCCC
Confidence 999766
No 17
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=2.7e-51 Score=440.35 Aligned_cols=353 Identities=19% Similarity=0.163 Sum_probs=267.0
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCccccccC-----cccCC-CCC-Ccc---eeEEEEEec-CceEEEEeCCC-CCH
Q 009507 74 DVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLN-----LRGSD-VPH-SPV---MYAYLIVEM-DRAKLFVDDSK-VTP 141 (533)
Q Consensus 74 ~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n-----~rg~d-i~~-~Pv---~~s~liv~~-~~~~Lfv~~~~-~~~ 141 (533)
..+++.+|+++.|++.+.|+++|.+..++.|++| ||... ..| +++ .-+++++.. +++.||+...+ +-.
T Consensus 11 h~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~~~~~~l~~~~~~d~w~ 90 (517)
T 3l24_A 11 HIATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWH 90 (517)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCSSS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCceecCCceEEeccCCCCCEEEEEecCCCeEEEEecchhhhh
Confidence 3567788899999999999999999999999988 55431 111 111 126777754 36677765321 000
Q ss_pred H----HHhh-hhcCCe-EEeeCccHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCC
Q 009507 142 D----VMDH-LKNAGV-ELRPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTG 215 (533)
Q Consensus 142 ~----~~~~-l~~~~v-~v~~y~~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (533)
. ..+. ....+| .+.+.+++.+.|..+ ..++++.......+. +.. .
T Consensus 91 g~~~~~~~~~~~~~~v~~~~~~~~~~~~L~~~---~~~~~~~g~~~~~~~---~~~----~------------------- 141 (517)
T 3l24_A 91 KVPDEPNEYWADYFDIELLVKPDQVEKLLPYD---KARFAYIGEYLEVAQ---ALG----F------------------- 141 (517)
T ss_dssp CCCCCCCSGGGGGSEEEEESSGGGCGGGSCSC---CTTEEEESSCHHHHH---HHT----C-------------------
T ss_pred ccccCchhhhhhccCeEEEcCHHHHHHHHhhc---cCceEEEcCCcCHHH---hhh----h-------------------
Confidence 0 0011 111233 334445555555332 334555543333211 110 0
Q ss_pred CCCCCCccccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCC
Q 009507 216 QSGGPAGVFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTS 295 (533)
Q Consensus 216 ~~~~~~~vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~s 295 (533)
...++++..+.+..+|+|||+.||+.||+|+++++.|+..+++.+ ++|+||.|+++.+.... ..|..+.+
T Consensus 142 --~~~~~~~~~~~l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~i------kpG~tE~el~~~~~~~~--~~g~~~~s 211 (517)
T 3l24_A 142 --ELMNPEPVMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAF------FQGKSEFEIQQAYLLAT--QHSENDNP 211 (517)
T ss_dssp --CCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTCCHHHHHHHHHHHH--TCCGGGSS
T ss_pred --ccCCchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHH--HcCCCcCC
Confidence 123466778899999999999999999999999999999888877 79999999999876532 45666789
Q ss_pred CCeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q 009507 296 FDTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFP 375 (533)
Q Consensus 296 f~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P 375 (533)
|++|+++|+|++++||.|++ .+.+++||+|++|+|++|+||++|+||||++|++ ++++++|++|++++.+++++++|
T Consensus 212 f~~IVasG~naa~~H~~p~~--~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~~-~e~~~ly~~vl~Aq~aai~~ikP 288 (517)
T 3l24_A 212 YGNIVALNENCAILHYTHFD--RVAPATHRSFLIDAGANFNGYAADITRTYDFTGE-GEFAELVATMKQHQIALMNQLAP 288 (517)
T ss_dssp SCCEEEEGGGGGCTTCCCCC--SSCCSSCCEEEEEEEEEETTEEEEEEEEEESSSC-SHHHHHHHHHHHHHHHHHTTCCT
T ss_pred cCCEEEEccccccccCCCCC--CccccCCCEEEEeecEEECCEEEEeEEEEEcCCC-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999976 1347999999999999999999999999999975 77899999999999999999999
Q ss_pred CCCCcchHHHHHHHHHH-----------------HcCC---CCcCccccccccCCccccCCCCCCCc-------------
Q 009507 376 QSTPGFVLDAFARSSLW-----------------KIGL---DYRHGTGHGVGAALNVHEGPQSISFR------------- 422 (533)
Q Consensus 376 ~G~~~~~ld~~ar~~l~-----------------~~G~---~~~h~~GHGvG~~l~vhE~P~~i~~~------------- 422 (533)
|+++.+|+.+|++.+. +.|+ .|+|++||||| |++||.|......
T Consensus 289 -Gv~~~dI~~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiG--LdvHE~p~~~~~~~g~~~~~~~~~p~ 365 (517)
T 3l24_A 289 -GKLYGELHLDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIG--LQVHDVGGFMADEQGAHQEPPEGHPF 365 (517)
T ss_dssp -TCBHHHHHHHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCS--SSSSCCCCTTC---------------
T ss_pred -CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCC--cccccCcccccccccccccccccccc
Confidence 9999999999998875 4454 58999999999 9999998632210
Q ss_pred CCCCccccCCCEEecCcceeec-------------------------CcceEEEEEeEEEeecCCCCCCCCcccccceec
Q 009507 423 YGNMTPLVEGMIVSNEPGYYED-------------------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKL 477 (533)
Q Consensus 423 ~~~~~~L~~GMv~siEPg~y~~-------------------------g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~L 477 (533)
.++..+|+||||||||||+|.+ |.+||||||+|+||++ |+|+|
T Consensus 366 l~~~~~Le~GMV~TIEPGiY~~~~~l~~~~~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~------------G~e~L 433 (517)
T 3l24_A 366 LRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHED------------SLENM 433 (517)
T ss_dssp CCTTCBCCTTEEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------------CEEEH
T ss_pred CCCCccccCCcEEEECCEEeechhhhhhhcccccccccccchhhhcCCCCEEEEeeEEEECCC------------cCeeC
Confidence 0256789999999999999983 5679999999999999 99999
Q ss_pred cc-CCCC
Q 009507 478 TF-VPIQ 483 (533)
Q Consensus 478 T~-~P~~ 483 (533)
|. +|.+
T Consensus 434 T~~~~~~ 440 (517)
T 3l24_A 434 TRELRLR 440 (517)
T ss_dssp HHHTTCC
T ss_pred CCccchh
Confidence 95 6754
No 18
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=7.8e-50 Score=402.70 Aligned_cols=233 Identities=18% Similarity=0.155 Sum_probs=210.0
Q ss_pred ccCCccchhh--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCC-----CCC
Q 009507 224 FRTSPIAFSK--AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSF 296 (533)
Q Consensus 224 d~~~~i~~lr--avK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~-----~sf 296 (533)
+..+.+..+| +|||++||+.||+|+++++.++.++++++ ++|+||.|+++.++.+..+ .|... .+|
T Consensus 21 ~~~~~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~~G~tE~el~~~~~~~~~~-~G~~~~~~~~~~f 93 (286)
T 3tav_A 21 SMVGLFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAA------KAGVSTLELDQVAESVIRE-AGAVPSFLGYHGF 93 (286)
T ss_dssp --CCTTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGC
T ss_pred HHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHH-cCCcccccccCCC
Confidence 3467888999 99999999999999999999999888777 8999999999999987554 45432 379
Q ss_pred CeEEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCC
Q 009507 297 DTISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQ 376 (533)
Q Consensus 297 ~~i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~ 376 (533)
++|+++|+|++++||.|++ +++|++||+|++|+|++|+||++|+|||+++|+|+++++++|+++++++.+++++++|
T Consensus 94 ~~iv~~g~n~~~~H~~p~~--~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp- 170 (286)
T 3tav_A 94 PASICSSVNDQVVHGIPSA--TAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIP- 170 (286)
T ss_dssp CSSEEEEETTBCSCCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCCT-
T ss_pred CCceEEecCccccCCCCCC--CcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 9999999999999999972 4999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHH----HHc--CCC-CcCccccccccCCccccCCCCCCCc--CCCCccccCCCEEecCcceeec---
Q 009507 377 STPGFVLDAFARSSL----WKI--GLD-YRHGTGHGVGAALNVHEGPQSISFR--YGNMTPLVEGMIVSNEPGYYED--- 444 (533)
Q Consensus 377 G~~~~~ld~~ar~~l----~~~--G~~-~~h~~GHGvG~~l~vhE~P~~i~~~--~~~~~~L~~GMv~siEPg~y~~--- 444 (533)
|+++++|+.++++.+ ++. |+. +.|++||||| +++||+|. ++.. ++++.+|++|||||+|||+|.+
T Consensus 171 G~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~GHgiG--~~~hE~P~-i~~~~~~~~~~~L~~GmV~tiEPgiy~~~~~ 247 (286)
T 3tav_A 171 GNRLTDVSHAIELGTRAAEKQFDRAFGIVDGYGGHGIG--RSMHLDPF-LPNEGAPGKGPLLAVGSVLAIEPMLTLGTTQ 247 (286)
T ss_dssp TCBHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEEECS--SSSSEEEE-ECSSCCSSCSSBCCTTBEEEECCEEESSCSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCcccCCcccCccc--ccccCCcc-ccCcCCCCCCCCcCCCCEEEEcCEEEcCCCc
Confidence 999999999999999 999 884 6899999999 99999998 5421 2467899999999999999975
Q ss_pred --------------CcceEEEEEeEEEeecCCCCCCCCcccccceecccCC
Q 009507 445 --------------HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 481 (533)
Q Consensus 445 --------------g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P 481 (533)
|.+|+|+||+|+||++ |+|.||..|
T Consensus 248 ~~~~~~~w~~~t~dg~~gvriEd~v~Vt~~------------G~e~LT~~p 286 (286)
T 3tav_A 248 TRVLADDWTVVTTDGSRAAHWEHTVAVTEA------------GPRILTMRP 286 (286)
T ss_dssp EEECTTSSCEEETTCCCEEECBEEEECCTT------------SCEESSCCC
T ss_pred eEecCCCceEEecCCCcEEEeeeEEEECCC------------cceeCCCCC
Confidence 5789999999999998 999999877
No 19
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=1.1e-49 Score=396.94 Aligned_cols=228 Identities=18% Similarity=0.192 Sum_probs=205.0
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCCeEEEecCC
Q 009507 231 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGAN 305 (533)
Q Consensus 231 ~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~-----~sf~~i~~~G~n 305 (533)
.+++|||++||+.||+|+++++.++.++++++ ++|+||.|+++.++++..+ .|... .+|++++++|+|
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~pG~tE~el~~~~~~~~~~-~G~~~~~~~~~~f~~iv~~g~n 76 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHV------KPNVTTNSLNDLCHNFITS-HNAIPAPLNYKGFPKSICTSIN 76 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSSEEEET
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHH-cCCcccccccCCCCcceEeccc
Confidence 47999999999999999999999999887776 8999999999999887554 44322 358999999999
Q ss_pred cccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHH
Q 009507 306 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 385 (533)
Q Consensus 306 ~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~ 385 (533)
++++||.|++ ++|++||+|++|+|++|+||++|+|||+++|+|+++++++|+++++++.+++++++| |+++.+|+.
T Consensus 77 ~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~i~~ 152 (262)
T 3mx6_A 77 HVVCHGIPND---KPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRP-GAKLGDIGY 152 (262)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCST-TCBHHHHHH
T ss_pred ccccCCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHH
Confidence 9999999975 899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCCCCC-cCCCCccccCCCEEecCcceeecCcceEEE------------
Q 009507 386 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYEDHAFGIRI------------ 451 (533)
Q Consensus 386 ~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~-~~~~~~~L~~GMv~siEPg~y~~g~~Giri------------ 451 (533)
++++++++.|+. +.|++||||| +++||.|...++ .++++.+|++||||++|||+|. |.+|+|+
T Consensus 153 ~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~-g~~gvri~~~d~w~~~~~~ 229 (262)
T 3mx6_A 153 AIQSYAEKHNYSVVRDYTGHGIG--RVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINA-GNYDTILSKLDGWTVTTRD 229 (262)
T ss_dssp HHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEES-SCSCEEECTTTSCCEEETT
T ss_pred HHHHHHHHcCCccCCCccccccC--CcccCCCcccccCCCCCCCEeCCCCEEEEeCEEEc-CCCeEEEecCCCceEEecC
Confidence 999999999996 7899999999 999999974433 2346789999999999999997 7788877
Q ss_pred -------EEeEEEeecCCCCCCCCcccccceecccCCCCC
Q 009507 452 -------ENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQT 484 (533)
Q Consensus 452 -------Ed~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~~ 484 (533)
||+|+||++ |+|.||..|.+.
T Consensus 230 ~~~~~~~Ed~v~Vt~~------------G~e~LT~~p~~l 257 (262)
T 3mx6_A 230 KSLSAQFEHTIGVTKD------------GFEIFTLSPKKL 257 (262)
T ss_dssp CCCEEECBEEEEECSS------------SEEESCCCTTCC
T ss_pred CCceeeeceEEEECCC------------cCeECCCCCccc
Confidence 999999998 999999999543
No 20
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=3.4e-49 Score=397.75 Aligned_cols=223 Identities=21% Similarity=0.221 Sum_probs=203.9
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCCeEEEecCC
Q 009507 231 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGAN 305 (533)
Q Consensus 231 ~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~-----~sf~~i~~~G~n 305 (533)
.+|++||++||+.||+|+++++.|+..+++++ ++|+||.|+++.++.+..+ .|... .+|++++++|+|
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i------~pG~tE~el~~~~~~~~~~-~G~~~~~~~~~~f~~iv~~g~n 109 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAV------APGVTTDELDRIAHEYLVD-NGAYPSTLGYKGFPKSCCTSLN 109 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSSEEEET
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCcHHHHHHHHHHHHHH-cCCccccccccCCCCceEeccc
Confidence 69999999999999999999999999888777 8999999999999987654 44321 469999999999
Q ss_pred cccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHH
Q 009507 306 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 385 (533)
Q Consensus 306 ~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~ 385 (533)
++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++++++|+++++++.+++++++| |+++++|+.
T Consensus 110 ~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~di~~ 185 (285)
T 3pka_A 110 EVICHGIPDS---TVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKP-GRALSVIGR 185 (285)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TSBTTHHHH
T ss_pred ceeecCCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHH
Confidence 9999999975 999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCCCC-Cc-CCCCccccCCCEEecCcceeec-----------------C
Q 009507 386 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSIS-FR-YGNMTPLVEGMIVSNEPGYYED-----------------H 445 (533)
Q Consensus 386 ~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~-~~-~~~~~~L~~GMv~siEPg~y~~-----------------g 445 (533)
++++.+++.|+. +.|++||||| +++||+|. +. +. ++++.+|++|||||+|||+|.+ |
T Consensus 186 ~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~P~-i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g 262 (285)
T 3pka_A 186 VIESYANRFGYNVVRDFTGHGIG--TTFHNGLV-VLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDR 262 (285)
T ss_dssp HHHHHHHTTTCEECCSSCEEBCS--SSSSCSCE-ECSSCCTTCCCBCCTTBEEEECCEEESSCSCEEECTTSCCEEETTC
T ss_pred HHHHHHHHcCCccCCCcccccCC--CcccCCCc-ccCccCCCCCCccCCCCEEEEcCEEEcCCCceeecCCCceEEecCC
Confidence 999999999996 8999999999 99999998 43 21 2367889999999999999984 5
Q ss_pred cceEEEEEeEEEeecCCCCCCCCcccccceeccc
Q 009507 446 AFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 479 (533)
Q Consensus 446 ~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~ 479 (533)
.+|+|+||+|+||++ |+|.||.
T Consensus 263 ~~gvriEdtv~Vt~~------------G~e~LT~ 284 (285)
T 3pka_A 263 KWTAQFEHTLLVTDT------------GVEILTC 284 (285)
T ss_dssp CCEEECBEEEEECSS------------SEEESSC
T ss_pred CcEEEEeeEEEECCC------------cCeECCC
Confidence 789999999999998 9999995
No 21
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=4.2e-49 Score=393.11 Aligned_cols=227 Identities=19% Similarity=0.169 Sum_probs=203.9
Q ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCCeEEEecCCc
Q 009507 232 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGANG 306 (533)
Q Consensus 232 lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~-----~sf~~i~~~G~n~ 306 (533)
||.|||+.||+.||+|+++++.|+..+++.+ ++|+||.|+++.++.+..+ .|... .+|++++++|.|+
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~i------kpG~tE~el~~~~~~~~~~-~G~~~~~~~~~~~~~~v~~g~~~ 73 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFI------KPGITSWDIEVFVRDFIES-HGGVAAQIGYEGYKYATCCSIND 73 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCCSEEEEETT
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhC------cCCCCHHHHHHHHHHHHHH-cCCCcccccccCCCcceEECCcc
Confidence 7899999999999999999999998888776 8999999999999886543 44321 4678899999999
Q ss_pred ccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHH
Q 009507 307 AIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAF 386 (533)
Q Consensus 307 a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ 386 (533)
+.+||.|++ ++|++||++++|+|+.|+||++|+||||++|+++++++++|+++++++.+++++++| |+++++|+.+
T Consensus 74 ~~~H~~~~~---~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kp-G~~~~di~~a 149 (264)
T 3tb5_A 74 EICHGFPRK---KVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQV-GNRIGDIGHA 149 (264)
T ss_dssp EEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHH
T ss_pred cccCCCCCC---ccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHHHHHHHhhhCC-CCCHHHHHHH
Confidence 999999976 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCC-CcCccccccccCCccccCCCCCCC-cCCCCccccCCCEEecCcceeec-----------------Ccc
Q 009507 387 ARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HAF 447 (533)
Q Consensus 387 ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~-~~~~~~~L~~GMv~siEPg~y~~-----------------g~~ 447 (533)
+++.+.+.|+. +.|++|||+| +.+||.|..... .++++.+|+||||||+|||+|.+ |.+
T Consensus 150 ~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~ 227 (264)
T 3tb5_A 150 IQTYVEGEGYGVVRDFVGHGIG--PTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGL 227 (264)
T ss_dssp HHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCC
T ss_pred HHHHHHHcCCceeeeceecCCC--CCCccCCccCccccCCCCCCccCCcEEEEeeeEEcCCCceEEcCCCCeEEecCCcc
Confidence 99999999995 6899999999 889999973322 12356789999999999999963 556
Q ss_pred eEEEEEeEEEeecCCCCCCCCcccccceecccCCCC
Q 009507 448 GIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 483 (533)
Q Consensus 448 GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~ 483 (533)
|+||||+|+||++ |+|.||..|.+
T Consensus 228 gvriEd~vlVT~~------------G~e~LT~~p~e 251 (264)
T 3tb5_A 228 SCQYEHSLAITKE------------GPRILTSQGEE 251 (264)
T ss_dssp EEECCEEEECCTT------------CCEETTCCSST
T ss_pred EEEeceEEEEcCC------------cCEECCCCCcc
Confidence 9999999999999 99999999943
No 22
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=1.5e-48 Score=388.82 Aligned_cols=228 Identities=16% Similarity=0.178 Sum_probs=204.1
Q ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHH-HHhhCCCC-----CCCCCeEEEecCC
Q 009507 232 SKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEF-RSKQSGFL-----DTSFDTISGSGAN 305 (533)
Q Consensus 232 lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~-r~~~~g~~-----~~sf~~i~~~G~n 305 (533)
||++||+.||+.||+|+++...++..+++.+ ++|+||.|+++.++.+ ..+ .|.. ..+|++++++|.|
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~el~~~~~~~~~~~-~g~~~~~~~~~~f~~iv~~g~n 73 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYV------KPGVSTGELDRICNDYIVNE-QHAVSACLGYHGYPKSVCISIN 73 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGC------STTCBHHHHHHHHHHHHHHT-SCCEESSTTGGGCCSSSEEEET
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHHH-hCCccccccccCCCcceEeccc
Confidence 6899999999999999999998887765544 8999999999999987 543 4432 1479999999999
Q ss_pred cccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHH
Q 009507 306 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 385 (533)
Q Consensus 306 ~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~ 385 (533)
++++||.|++ +++|++||++++|+|++|+||++|+||||++|+|+++++++|+++++++.+++++++| |+++++|+.
T Consensus 74 ~~~~H~~p~~--~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v~~ 150 (263)
T 2gg2_A 74 EVVCHGIPDD--AKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKP-GINLREIGA 150 (263)
T ss_dssp TEEECCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHH
T ss_pred ccccCCCCCC--CcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9999999864 3899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCCCCC-cCCCCccccCCCEEecCcceeec-----------------Cc
Q 009507 386 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISF-RYGNMTPLVEGMIVSNEPGYYED-----------------HA 446 (533)
Q Consensus 386 ~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~-~~~~~~~L~~GMv~siEPg~y~~-----------------g~ 446 (533)
++++.+++.|+. +.|++||||| +.+||+|...++ .++++.+|++|||||+|||+|.+ +.
T Consensus 151 ~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~ 228 (263)
T 2gg2_A 151 AIQKFVEAEGFSVVREYCGHGIG--RGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRS 228 (263)
T ss_dssp HHHHHHHHTTCEECSSCCEEECS--SSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCC
T ss_pred HHHHHHHHcCCEECCCcccccCC--cceecCCcccCccCCCCCCCcCCCCEEEEecEEEcCCCceEEcCCCceEEecCCC
Confidence 999999999996 7899999999 999999974433 12367899999999999999973 46
Q ss_pred ceEEEEEeEEEeecCCCCCCCCcccccceecccCCCC
Q 009507 447 FGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 483 (533)
Q Consensus 447 ~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~ 483 (533)
+|+|+||+|+||++ |+|.||..|.+
T Consensus 229 ~g~riEdtvlVt~~------------G~e~LT~~p~~ 253 (263)
T 2gg2_A 229 LSAQYEHTIVVTDN------------GCEILTLRKDD 253 (263)
T ss_dssp CEEECBEEEEEETT------------EEEESSCCTTC
T ss_pred eEEEEEEEEEECCC------------ccEEeCCCCcc
Confidence 79999999999998 99999999954
No 23
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=1.8e-48 Score=401.65 Aligned_cols=232 Identities=19% Similarity=0.205 Sum_probs=208.0
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCC-----CCCCCeEEEecCC
Q 009507 231 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL-----DTSFDTISGSGAN 305 (533)
Q Consensus 231 ~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~-----~~sf~~i~~~G~n 305 (533)
.+++|||++||+.||+|+++++.|+..+++++ ++|+||.|+++.++++..+ .|.. ..+|++|+++|.|
T Consensus 99 ~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~i------kpGvTE~El~~~~~~~~~~-~Ga~ps~l~y~~Fp~iv~sg~N 171 (368)
T 3s6b_A 99 SDIYVNNEEEIQRIREACILGRKTLDYAHTLV------SPGVTTDEIDRKVHEFIIK-NNAYPSTLNYYKFPKSCCTSVN 171 (368)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSEEEEET
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHH-cCCccccccccCCCCeEEEcCc
Confidence 47899999999999999999999999888776 8999999999999987654 4432 2469999999999
Q ss_pred cccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCC---CCCHHHHHHHHHHHHHHHHHHHccCCCCCCcch
Q 009507 306 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFG---EPTAREKECFTRVLQGHIALDQAIFPQSTPGFV 382 (533)
Q Consensus 306 ~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G---~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ 382 (533)
++++||.|++ ++|++||+|+||+|++|+||++|+||||++| +++++++++|+++++++.+++++++| |+++++
T Consensus 172 ~~i~H~~p~~---r~L~~GDiV~iD~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikP-G~~~~d 247 (368)
T 3s6b_A 172 EIVCHGIPDY---RPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKP-GMFYKN 247 (368)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCT-TCBTHH
T ss_pred cccccCCCCC---ccccCCCEEEEEEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccC-CCcHHH
Confidence 9999999975 9999999999999999999999999999999 99999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCc-CCCCccccCCCEEecCcceee-----------------
Q 009507 383 LDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYE----------------- 443 (533)
Q Consensus 383 ld~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~-~~~~~~L~~GMv~siEPg~y~----------------- 443 (533)
|+.++++++++.|+. +.|++||||| +++||.|....+. ++...+|++|||||||||+|.
T Consensus 248 I~~aa~~~i~~~G~~~~~~~~GHGIG--~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPgiy~~~~~~~~~~d~wt~~t~ 325 (368)
T 3s6b_A 248 IGTLIDAYVSKKNFSVVRSYSGHGVG--KLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATS 325 (368)
T ss_dssp HHHHHHHHHHTTTCEECCSCCEEECS--SSSSEEEEECSSSSCCCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEET
T ss_pred HHHHHHHHHHHcCCCcccceeeCCCC--ccccCCCccccccCCCCCCEECCCCEEEEcCeEEcCcccccccCCCceeEee
Confidence 999999999999996 8899999999 9999999743322 124568999999999999997
Q ss_pred cCcceEEEEEeEEEeecCCCCCCCCcccccceeccc-CCCCCCcc
Q 009507 444 DHAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-VPIQTKLV 487 (533)
Q Consensus 444 ~g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~-~P~~~~li 487 (533)
+|.+|+|+||+|+||++ |+|.||. .|.+..++
T Consensus 326 dG~~gvriEdtVlVTe~------------G~EvLT~~~pk~~~~~ 358 (368)
T 3s6b_A 326 DGKLSAQFEHTLLITNN------------GVEILTKRTQDSPPLG 358 (368)
T ss_dssp TCCCEEECBEEEEEETT------------EEEETTCCCTTCCCCS
T ss_pred CCccEEEEeEEEEEcCC------------cCeECCCCCCCCcCce
Confidence 46789999999999998 9999996 56555544
No 24
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=3.5e-48 Score=385.99 Aligned_cols=225 Identities=24% Similarity=0.231 Sum_probs=201.2
Q ss_pred chhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCC----C-CCCCeEEEecC
Q 009507 230 AFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFL----D-TSFDTISGSGA 304 (533)
Q Consensus 230 ~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~----~-~sf~~i~~~G~ 304 (533)
..||++||+.||+.||+|+++...++..+++.+ ++|+||.|+++.++.+..+. |.. + .+|++++++|+
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~pG~te~el~~~~~~~~~~~-G~~~~~~~~~~f~~~v~~g~ 83 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKVI------VPGKTAWDVETLVLEIFKKL-RVKPAFKGYGGYKYATCVSV 83 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGC------STTCBHHHHHHHHHHHHHHH-TCEESSTTGGGCCCSEEEEE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCcHHHHHHHHHHHHHHc-CCccccccccCCCcceEecc
Confidence 469999999999999999999998887766544 89999999999999876544 332 1 47889999999
Q ss_pred CcccccccCCCCCCcc-cCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchH
Q 009507 305 NGAIIHYKPEPGKCSV-VDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVL 383 (533)
Q Consensus 305 n~a~~hy~p~~~~~~~-i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~l 383 (533)
|++++||.|++ ++ |++||+|++|+|++|+||++|+||||++|+|+++++++|+++++++.+++++++| |+++.+|
T Consensus 84 n~~~~H~~p~~---~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v 159 (262)
T 1o0x_A 84 NEEVVHGLPLK---EKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKP-GIRLGDV 159 (262)
T ss_dssp TTBCSCCCCCT---TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCT-TSBHHHH
T ss_pred cccccCCCCCC---CcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHH
Confidence 99999999975 88 9999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCc-CCCCccccCCCEEecCcceee-----------------c
Q 009507 384 DAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYE-----------------D 444 (533)
Q Consensus 384 d~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~-~~~~~~L~~GMv~siEPg~y~-----------------~ 444 (533)
+.++++.+++.|+. +.|++||||| +++||.|...++. ++++.+|+||||||+|||+|. +
T Consensus 160 ~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi~~g~~~v~~~~~~w~~~~~~ 237 (262)
T 1o0x_A 160 SHCIQETVESVGFNVIRDYVGHGVG--RELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVD 237 (262)
T ss_dssp HHHHHHHHHHTTCEECCSSCEEECS--SSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETT
T ss_pred HHHHHHHHHHcCCcccCCcccCccc--ccccCCCccCCCCCCCCCCccCCCCEEEECCEEEcCCCceeecCCCceEEeeC
Confidence 99999999999996 8999999999 9999999733221 236789999999999999997 4
Q ss_pred CcceEEEEEeEEEeecCCCCCCCCcccccceeccc
Q 009507 445 HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF 479 (533)
Q Consensus 445 g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~ 479 (533)
+.+|+|+||+|+||++ |+|.||.
T Consensus 238 g~~gvriEdtvlVt~~------------G~e~LT~ 260 (262)
T 1o0x_A 238 GSRCAHFEHTILITEN------------GAEILTK 260 (262)
T ss_dssp CCCEEECBEEEEECSS------------SEEESSC
T ss_pred CCcEEEEEEEEEECCC------------ccEeCCC
Confidence 6789999999999998 9999995
No 25
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=1.9e-47 Score=391.08 Aligned_cols=228 Identities=17% Similarity=0.152 Sum_probs=204.8
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCC-----CCCCeEEEecCC
Q 009507 231 FSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLD-----TSFDTISGSGAN 305 (533)
Q Consensus 231 ~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~-----~sf~~i~~~G~n 305 (533)
.+|+|||++||+.||+|+++++.|+..+++++ ++|+||.|+++.++++..+ .|... .+|++++++|.|
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i------~pGvte~el~~~~~~~~~~-~G~~~~~~~y~~fp~iv~sg~n 143 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAAGMI------KPGVTTEEIDHAVHLACIA-RNCYPSPLNYYNFPKSCCTSVN 143 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC------CTTCBHHHHHHHHHHHHHH-TTCEETTTTGGGCCSSSEEEET
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHh------hCCCcHHHHHHHHHHHHHH-cCCccccccccCCCCeEEecCC
Confidence 58999999999999999999999999887766 8999999999999987654 44321 469999999999
Q ss_pred cccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHH
Q 009507 306 GAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDA 385 (533)
Q Consensus 306 ~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~ 385 (533)
++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+++++++++|+++++++.+++++++| |+++.+|+.
T Consensus 144 ~~~~H~~p~~---~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kP-G~~~~dI~~ 219 (329)
T 2b3h_A 144 EVICHGIPDR---RPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKP-GVRYRELGN 219 (329)
T ss_dssp TEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBTTHHHH
T ss_pred CCcCCCCCCC---cCCCCCCEEEEEeeEEECCEEEeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcHHHHHH
Confidence 9999999975 999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCcC-CCCccccCCCEEecCcceee-----------------cCc
Q 009507 386 FARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-GNMTPLVEGMIVSNEPGYYE-----------------DHA 446 (533)
Q Consensus 386 ~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~~-~~~~~L~~GMv~siEPg~y~-----------------~g~ 446 (533)
++++.+++.|+. +.|++||||| +++||+|....+.. ....+|++|||||||||+|. +|.
T Consensus 220 ~~~~~~~~~G~~~~~~~~GHGIG--~~~HE~P~i~~~~~~~~~~~L~~GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~ 297 (329)
T 2b3h_A 220 IIQKHAQANGFSVVRSYCGHGIH--KLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGK 297 (329)
T ss_dssp HHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEESSCCCEEECTTSCCEEETTCC
T ss_pred HHHHHHHHcCCCccCCcccCCcC--cccccCCcccccccCCCCCEECCCCEEEEeCCcCcCcccccccCCCceeEeeCCe
Confidence 999999999996 8999999999 89999997433221 12478999999999999995 477
Q ss_pred ceEEEEEeEEEeecCCCCCCCCcccccceeccc-C-CCC
Q 009507 447 FGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTF-V-PIQ 483 (533)
Q Consensus 447 ~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~-~-P~~ 483 (533)
+|+|+||+|+||++ |+|.||. . |..
T Consensus 298 ~g~riEdtvlVTe~------------G~evLT~~~~~k~ 324 (329)
T 2b3h_A 298 RSAQFEHTLLVTDT------------GCEILTRRLDSAR 324 (329)
T ss_dssp CEEECBEEEEECSS------------SEEETTCCSSCSS
T ss_pred EEEEEeeEEEEcCC------------eeEECCCCCCCCC
Confidence 99999999999998 9999995 3 543
No 26
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=1.3e-47 Score=379.81 Aligned_cols=223 Identities=21% Similarity=0.221 Sum_probs=199.4
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCC-----CCCeEEEecCCcccc
Q 009507 235 VKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDT-----SFDTISGSGANGAII 309 (533)
Q Consensus 235 vK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~-----sf~~i~~~G~n~a~~ 309 (533)
|||+.||+.||+|+++...++..+++.+ ++|+||.|+++.++++..+ .|.... +|++++++|+|++++
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i------~~G~te~el~~~~~~~~~~-~g~~~~~~~~~~f~~~v~~g~n~~~~ 75 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAAT------KPGITTKELDNIAKELFEE-YGAISAPIHDENFPGQTCISVNEEVA 75 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-HTCEEHHHHHHCCSSSSEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHC------CCCCcHHHHHHHHHHHHHH-cCCcccccccCCCCcceEEcCCcccc
Confidence 9999999999999999998888766555 8999999999999987554 343322 799899999999999
Q ss_pred cccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCH-HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHH
Q 009507 310 HYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTA-REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFAR 388 (533)
Q Consensus 310 hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~-e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar 388 (533)
||.|++ ++|++||+|++|+|++|+||++|+||||++|++++ +++++|+++++++.+++++++| |+++++|+.+++
T Consensus 76 H~~p~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kp-G~~~~~i~~~~~ 151 (252)
T 1qxy_A 76 HGIPSK---RVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKP-GTKLSNIGKAVH 151 (252)
T ss_dssp CCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCT-TCBTHHHHHHHH
T ss_pred CCCCCC---cCcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Confidence 999975 99999999999999999999999999999999999 9999999999999999999999 999999999999
Q ss_pred HHHHHcCCC-CcCccccccccCCccccCC-CCCCCc-CCCCccccCCCEEecCcceee-----------------cCcce
Q 009507 389 SSLWKIGLD-YRHGTGHGVGAALNVHEGP-QSISFR-YGNMTPLVEGMIVSNEPGYYE-----------------DHAFG 448 (533)
Q Consensus 389 ~~l~~~G~~-~~h~~GHGvG~~l~vhE~P-~~i~~~-~~~~~~L~~GMv~siEPg~y~-----------------~g~~G 448 (533)
+.+++.|+. +.|++||||| +++||.| ...++. ++++.+|++|||||+|||+|. ++.+|
T Consensus 152 ~~~~~~g~~~~~~~~GHgiG--~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g 229 (252)
T 1qxy_A 152 NTARQNDLKVIKNLTGHGVG--LSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFV 229 (252)
T ss_dssp HHHHHTTCEECTTCCEEECS--SSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCE
T ss_pred HHHHHcCCEecCCccccccC--cccccCCccccCCCCCCCCCCccCCCEEEEecEEEcCCCceEecCCCceEEecCCCcE
Confidence 999999995 7899999999 9999999 643332 235789999999999999997 56799
Q ss_pred EEEEEeEEEeecCCCCCCCCcccccceecccCCCC
Q 009507 449 IRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVPIQ 483 (533)
Q Consensus 449 iriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P~~ 483 (533)
+|+||+|+||++ | |.||..|.+
T Consensus 230 ~riEdtvlVt~~------------G-e~Lt~~p~~ 251 (252)
T 1qxy_A 230 AQIEHTVIVTKD------------G-PILTTKIEE 251 (252)
T ss_dssp EEEEEEEECCTT------------C-CEETTCC--
T ss_pred EEEEEEEEECCC------------c-eEccCCCCC
Confidence 999999999998 9 999999854
No 27
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=1.1e-46 Score=388.01 Aligned_cols=235 Identities=16% Similarity=0.110 Sum_probs=207.0
Q ss_pred cccCCccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCC----CCCCCCCe
Q 009507 223 VFRTSPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSG----FLDTSFDT 298 (533)
Q Consensus 223 vd~~~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g----~~~~sf~~ 298 (533)
+...++....|.|||++||+.||+|+++++.|+..+++.+ ++|+||.|+++.++++..+... ....+|++
T Consensus 51 v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~~~~~~i------kpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~ 124 (337)
T 4fuk_A 51 VKVYNIQFLHDDSKKTAEIQRIKTVCQLSREVLDIATAAA------KPGITTDELDRIVHEATVERNMYPSPLNYYGFPK 124 (337)
T ss_dssp CCCCCCTTTTCTTC--CHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCS
T ss_pred cccccchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHc------cCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCc
Confidence 3445677789999999999999999999999999888777 9999999999998876544322 23468999
Q ss_pred EEEecCCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCC
Q 009507 299 ISGSGANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQST 378 (533)
Q Consensus 299 i~~~G~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~ 378 (533)
++++|.|++++||.|++ ++|++||+|++|+|+.|+||++|+||||++|+++++++++|+.+++++.+++++++| |+
T Consensus 125 iv~~g~n~~~~H~~~~~---~~l~~GD~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kp-G~ 200 (337)
T 4fuk_A 125 SVCTSVNEVICHGIPDS---RELEEGDILNIDVSSYLNGFHGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKP-EA 200 (337)
T ss_dssp SSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCST-TC
T ss_pred eeeccccccccCCCCCC---ccccCCCEEEEecceeECCEEEeeeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccc-cc
Confidence 99999999999999976 999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CcchHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCc-CCCCccccCCCEEecCcceeec------------
Q 009507 379 PGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFR-YGNMTPLVEGMIVSNEPGYYED------------ 444 (533)
Q Consensus 379 ~~~~ld~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~-~~~~~~L~~GMv~siEPg~y~~------------ 444 (533)
++++++.++++.+.+.|+. +.|++||||| +.+||.|....+. +++..+|+||||||||||+|.+
T Consensus 201 ~~~di~~~~~~~~~~~g~~~~~~~~GHGIG--~~~he~p~~~~~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt 278 (337)
T 4fuk_A 201 LYKQVGDAIEACASQYQCSVVRTYTGHGVG--HLFHTSPTVCHYANNKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWT 278 (337)
T ss_dssp BTTHHHHHHHHHHHTTTCEECSSEEEEECS--SSSSEEEEECCSCC---CCBCCTTCEEEECCEEESSCSCEEECTTSSC
T ss_pred cHHHHHHHHHHHHHHhcCCcccCcccCCCC--CccccCCcccccccCCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCe
Confidence 9999999999999999995 7899999999 8899998744322 2355789999999999999974
Q ss_pred -----CcceEEEEEeEEEeecCCCCCCCCcccccceecccCC
Q 009507 445 -----HAFGIRIENLLYVKEVGTPNRFGGVSYLGFEKLTFVP 481 (533)
Q Consensus 445 -----g~~GiriEd~v~Vt~~~~~~~~~~~~~lg~e~LT~~P 481 (533)
|.+|+||||+|+||++ |+|.||..|
T Consensus 279 ~~t~dg~~gvriEd~VlVTe~------------G~EvLT~~p 308 (337)
T 4fuk_A 279 STTKDGRRSAQFEHTMVVTNG------------GVEIFTDWV 308 (337)
T ss_dssp EEETTCCCEEECBEEEEECSS------------SEEESSCCS
T ss_pred EEecCCceEEEeccEEEEcCC------------cCEECCCCC
Confidence 6679999999999999 999999877
No 28
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=2e-40 Score=347.71 Aligned_cols=205 Identities=9% Similarity=0.028 Sum_probs=173.5
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhC---------CCCCCCCC
Q 009507 227 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQS---------GFLDTSFD 297 (533)
Q Consensus 227 ~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~---------g~~~~sf~ 297 (533)
.-+..+|+|||++||+.||+|+++...++..+...+ ++|+||.|+++.++++..+.. .+.+.+|+
T Consensus 11 ~~v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~i------kpGvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~ 84 (401)
T 2q8k_A 11 EDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEAS------SSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFP 84 (401)
T ss_dssp ---CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHC------C-CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEE
T ss_pred ccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCC
Confidence 346789999999999999999999998888766655 899999999999887644321 22345676
Q ss_pred eEEEecCCcccccccCCCC-CCcccCCCCeEEEEeceeecCcccceeecCcCC-----CCCHHHHHHHHHHHHHHHHHHH
Q 009507 298 TISGSGANGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFG-----EPTAREKECFTRVLQGHIALDQ 371 (533)
Q Consensus 298 ~i~~~G~n~a~~hy~p~~~-~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G-----~p~~e~~~~y~~vl~~~~~~~~ 371 (533)
++++ .|.+++||.|.+. ++++|++||+|+||+|++|+||++|+||||++| +++++++++|+++++++.++++
T Consensus 85 ~~vS--~N~~v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~ 162 (401)
T 2q8k_A 85 TSIS--VNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALR 162 (401)
T ss_dssp EEEE--ETTEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred cEEe--CCcccccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6554 7999999999543 258999999999999999999999999999999 8999999999999999999999
Q ss_pred ccCCCCCCcchHHHHHHHHHHHcCCC-CcCccccccccCCccccCCCCCCCcC-------CCCccccCCCEEecCccee
Q 009507 372 AIFPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGVGAALNVHEGPQSISFRY-------GNMTPLVEGMIVSNEPGYY 442 (533)
Q Consensus 372 ~~~P~G~~~~~ld~~ar~~l~~~G~~-~~h~~GHGvG~~l~vhE~P~~i~~~~-------~~~~~L~~GMv~siEPg~y 442 (533)
+++| |+++++|+.++++++++.|+. +.+.+||||| +.+||+|..|...+ +...+|++||||+|||+++
T Consensus 163 ~~kP-G~~~~dI~~ai~~~~~~~G~~~v~~~~GHGIG--~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~ 238 (401)
T 2q8k_A 163 LVKP-GNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLK--QHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVS 238 (401)
T ss_dssp HCST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEB--TTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEE
T ss_pred HhCC-CCcHHHHHHHHHHHHHHcCCeecCCcccccCC--CccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceE
Confidence 9999 999999999999999999995 5688999999 89999996332211 2467899999999999997
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=3e-38 Score=318.99 Aligned_cols=203 Identities=16% Similarity=0.103 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCCCCCCCCCeEEEecCCcccccccCCCCCC
Q 009507 239 AELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSGFLDTSFDTISGSGANGAIIHYKPEPGKC 318 (533)
Q Consensus 239 ~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g~~~~sf~~i~~~G~n~a~~hy~p~~~~~ 318 (533)
+||+.||+|+++++.++..+++++ ++|+||.|+++.++++..+ .|.. ++|+++++. |.+++||.|++.++
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i------~pG~te~el~~~~~~~~~~-~G~~-~~fp~~vs~--n~~~~H~~p~~~~~ 70 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLA------RPGMLLLELAESIEKMIME-LGGK-PAFPVNLSI--NEIAAHYTPYKGDT 70 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHH-TTCE-ESSCCEEEE--TTEEECCCCCTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHHH-cCCC-CCCCcEEee--CCccccccCCCCCC
Confidence 489999999999999999888776 8999999999999987654 4543 799988864 67789999986556
Q ss_pred cccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-
Q 009507 319 SVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD- 397 (533)
Q Consensus 319 ~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~- 397 (533)
++|++||+|++|+|++|+||++|+||||++|+ +++++|+++++++.+++++++| |+++++|+.++++++++.|+.
T Consensus 71 ~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kp-G~~~~dI~~a~~~~~~~~G~~~ 146 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARA-GVEIKELGKAIENEIRKRGFKP 146 (295)
T ss_dssp CBCCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCST-TCBTHHHHHHHHHHHHTTTCEE
T ss_pred ccccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHCCCeE
Confidence 99999999999999999999999999999997 7889999999999999999999 999999999999999999996
Q ss_pred CcCccccccccCCccccCCCCCCCcCCC-CccccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 398 YRHGTGHGVGAALNVHEGPQSISFRYGN-MTPLVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 398 ~~h~~GHGvG~~l~vhE~P~~i~~~~~~-~~~L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+.|++|||||. +.+||+|...++...+ +.+|+|||||+|||++| +|.+++|+||..-|
T Consensus 147 ~~~~~GHgIG~-l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~-~G~g~v~~~~~~~i 205 (295)
T 1xgs_A 147 IVNLSGHKIER-YKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFAT-IGAGQVIEVPPTLI 205 (295)
T ss_dssp CTTCCEEECBT-TBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEE-SSCSCEEEEEEEEE
T ss_pred ECCCcCCCCCC-cccCCCCcCCccCCCCCCCEeCCCCEEEEcceeE-CCCCEEEECCceEE
Confidence 78999999985 5899999744433334 78999999999999999 89999999985433
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=2.3e-37 Score=327.86 Aligned_cols=200 Identities=17% Similarity=0.204 Sum_probs=172.9
Q ss_pred chhhcc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHh---hCCC-CCCCCCeEEEec
Q 009507 230 AFSKAV--KNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSK---QSGF-LDTSFDTISGSG 303 (533)
Q Consensus 230 ~~lrav--K~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~---~~g~-~~~sf~~i~~~G 303 (533)
..+|++ ||+.||+.||+|+++...++..++..+ ++|+||.|+++.++..... ..|. .+.+|+++++.
T Consensus 153 eelR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~i------kpGvTe~ELa~~le~~~~~~i~~~Ga~~g~~FP~ivSv- 225 (478)
T 1b6a_A 153 EEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWI------KPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSL- 225 (478)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC------CTTSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEEEE-
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhc------CCCCcHHHHHHHHHHHHHHHHHhcCCcccCCCCeEEEC-
Confidence 355655 999999999999999998888776665 8999999999998875432 2344 45689998764
Q ss_pred CCcccccccCCCCCCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchH
Q 009507 304 ANGAIIHYKPEPGKCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVL 383 (533)
Q Consensus 304 ~n~a~~hy~p~~~~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~l 383 (533)
|.+++||.|+..++++|++||+|+||+|++|+||++|+||||++| ++++++|+++++++.+++++++| |+++++|
T Consensus 226 -N~~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~eA~~aaI~~~kP-G~~~~dI 300 (478)
T 1b6a_A 226 -NNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVKDATNTGIKCAGI-DVRLCDV 300 (478)
T ss_dssp -TTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHHHHHHHHHHHCCT-TCBHHHH
T ss_pred -CCccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcC-CCCHHHH
Confidence 788899999853358999999999999999999999999999996 68999999999999999999999 9999999
Q ss_pred HHHHHHHHHHcCCC----------CcCcccccc-ccCCccccCCCCCCCcCCCCccccCCCEEecCcceee
Q 009507 384 DAFARSSLWKIGLD----------YRHGTGHGV-GAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYE 443 (533)
Q Consensus 384 d~~ar~~l~~~G~~----------~~h~~GHGv-G~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~ 443 (533)
+.+++++++++|+. +.|++|||| | +.+||+|......++...+|++||||+|||++|.
T Consensus 301 ~~ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGG--l~iHE~P~vP~~~~~~~~~Le~GMVftIEP~i~~ 369 (478)
T 1b6a_A 301 GEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQ--YRIHAGKTVPIVKGGEATRMEEGEVYAIETFGST 369 (478)
T ss_dssp HHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBT--TBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEES
T ss_pred HHHHHHHHHHcCCCcccccccceeecCcceeCCCC--ccccCCCccceecCCCCCEeCCCCEEEEeCeeEC
Confidence 99999999999973 689999999 7 8999988655544556789999999999999983
No 31
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=1.6e-36 Score=312.92 Aligned_cols=202 Identities=12% Similarity=0.061 Sum_probs=176.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCC---CCCCCCCeEEEecCCccccc
Q 009507 234 AVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSG---FLDTSFDTISGSGANGAIIH 310 (533)
Q Consensus 234 avK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g---~~~~sf~~i~~~G~n~a~~h 310 (533)
...|++||+.||+|+++...++..+.+.+ ++|+||.|+++.+++...+..+ ..+.+|++++ |.|++++|
T Consensus 40 ~~~s~~EI~~mR~A~~I~~~a~~~~~~~i------kpG~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~--s~N~~~~H 111 (360)
T 2nw5_A 40 NFTESDILQDARRAAEAHRRARYRVQSIV------RPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGM--SMNSCAAH 111 (360)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEE--EETTEEEC
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCHHHHHHHHHHHHHHhcCCCccCccccCcee--eccccccC
Confidence 34599999999999999999988877666 8999999999999876544433 2356898874 68999999
Q ss_pred ccCCCCC-CcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHH
Q 009507 311 YKPEPGK-CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARS 389 (533)
Q Consensus 311 y~p~~~~-~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~ 389 (533)
|.|+..+ +++|++||+|+||+|++|+||++|+|||+++| ++++++|+++++|+.+++++++| |+++++|+.++++
T Consensus 112 ~~P~~~d~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~---~~~~~l~~av~eA~~aai~~~kP-Gv~~~dI~~ai~~ 187 (360)
T 2nw5_A 112 YTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK---ENLEPLLVAAREGTETGIKSLGV-DVRVCDIGRDINE 187 (360)
T ss_dssp CCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECC---GGGHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHH
T ss_pred CCCCcccCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC---HHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHH
Confidence 9998543 68999999999999999999999999999995 58999999999999999999999 9999999999999
Q ss_pred HHHHcCC----------CCcCccccccccCC-ccccCCCCCCCcCCCCccccCCCEEecCcceeecCcceEE
Q 009507 390 SLWKIGL----------DYRHGTGHGVGAAL-NVHEGPQSISFRYGNMTPLVEGMIVSNEPGYYEDHAFGIR 450 (533)
Q Consensus 390 ~l~~~G~----------~~~h~~GHGvG~~l-~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~y~~g~~Gir 450 (533)
++.++|+ .+.|.+||||| + .+||+|...+..++++.+|++||||+|||++| +|.+++|
T Consensus 188 vi~~~G~~~~g~~~~~~~v~~~~GHgIG--~y~iHe~P~I~~~~~~~~~~Le~GmV~aIEP~i~-~G~G~Vr 256 (360)
T 2nw5_A 188 VISSYEVEIGGRMWPIRPISDLHGHSIS--QFRIHGGISIPAVNNRDTTRIKGDSFYAVETFAT-TGKGSID 256 (360)
T ss_dssp HHTTCEEECSSSEEECEECTTCCEEEEB--TTBSCCSCEECSSCCCCCCBCCSSEEEEEEEEEE-SSCSCCE
T ss_pred HHHHcCCccccccccccccCCeeEeeec--CceeccCCEeccccCCCCcEEeCCcEEEEeceEE-CCcceEE
Confidence 9999986 25699999999 8 89999984444445778999999999999999 8999998
No 32
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.97 E-value=1.3e-30 Score=269.54 Aligned_cols=201 Identities=12% Similarity=0.063 Sum_probs=164.7
Q ss_pred ccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhCC---CCCCCCCeEEEecC
Q 009507 228 PIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQSG---FLDTSFDTISGSGA 304 (533)
Q Consensus 228 ~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~g---~~~~sf~~i~~~G~ 304 (533)
-...+|.+|+++||+.||+|+++...++..+..++ +||+|+.|+++.++++..+..+ +.+.+||+.++ .
T Consensus 32 ~~~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~i------kpG~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciS--v 103 (358)
T 3fm3_A 32 RNMEIENFTESDILQDARRAAEAHRRARYRVQSIV------RPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMS--M 103 (358)
T ss_dssp TSCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC------CTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEE--E
T ss_pred hHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhC------CCCCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEe--e
Confidence 34789999999999999999999998887776665 9999999999999876443222 23458886554 5
Q ss_pred CcccccccCCCC-CCcccCCCCeEEEEeceeecCcccceeecCcCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCcchH
Q 009507 305 NGAIIHYKPEPG-KCSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEPTAREKECFTRVLQGHIALDQAIFPQSTPGFVL 383 (533)
Q Consensus 305 n~a~~hy~p~~~-~~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p~~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~l 383 (533)
|..++||.|... ++++|+.||+|.||+|++|+||++|+|||+.+|+..+ ++++++.+++.+++++++| |++..++
T Consensus 104 N~~v~Hg~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~~~---~l~~~~~~al~aai~~~~p-G~~~~di 179 (358)
T 3fm3_A 104 NSCAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKENLE---PLLVAAREGTETGIKSLGV-DVRVCDI 179 (358)
T ss_dssp TTEEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGGGH---HHHHHHHHHHHHHHHHCCT-TCBHHHH
T ss_pred CCEEEecCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccccccch---hHHHHHHHHHHHHHHhhhc-CCccccc
Confidence 777889999642 4689999999999999999999999999999997554 4567778888899999999 9999999
Q ss_pred HHHHHHHHHHcCCC----------CcCccccccccCCccccCCCCCCCcCCCCccccCCCEEecCcce
Q 009507 384 DAFARSSLWKIGLD----------YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGMIVSNEPGY 441 (533)
Q Consensus 384 d~~ar~~l~~~G~~----------~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GMv~siEPg~ 441 (533)
..++++++.+.|+. +.+.+|||||++ ..||.|....+..+....|++||||+|||.+
T Consensus 180 g~ai~~v~~~~~~~v~~~~~~~~~v~~~~GHgiG~~-~~he~~~ip~~~~~~~~~le~GmV~tIEP~i 246 (358)
T 3fm3_A 180 GRDINEVISSYEVEIGGRMWPIRPISDLHGHSISQF-RIHGGISIPAVNNRDTTRIKGDSFYAVETFA 246 (358)
T ss_dssp HHHHHHHHTTCEEECSSSEEECEECTTCCEEEEBTT-BSCCSCEECSSCCCCCCBCCSSEEEEEEEEE
T ss_pred cHHHHHHHhhccceeccccccccccccccccccCCc-cccCCCccCccCCCCCcEEeeeeeEEeeeee
Confidence 99999999988752 356789999954 3588876444444566789999999999975
No 33
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=99.66 E-value=2.4e-16 Score=139.27 Aligned_cols=126 Identities=17% Similarity=0.247 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhhhcCCeEE
Q 009507 75 VASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVEL 154 (533)
Q Consensus 75 ~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l~~~~v~v 154 (533)
+++|++++|+.|+++|+|+++|++++|++||||++|++ ++++|+.+++.||+|.. ...++++.+ .++++
T Consensus 4 ~~~Rl~~lr~~m~~~~~da~li~~~~ni~YltGf~~~~--------~~llv~~~~~~l~~d~r-~~~~a~~~~--~~~~v 72 (131)
T 3il0_A 4 MQRRLERFDAKLVQSGLDALLVTGQNNIYYLTDFWGTN--------ATVFITKNRRLFLTDSR-YTLIAKQSV--HGFDI 72 (131)
T ss_dssp GGGHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCSS--------EEEEEESSCEEEEECTT-SHHHHHHHC--CSSEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccccEEEeCcccCC--------eEEEEECCCCEEEECch-hHHHHHHhC--CCcEE
Confidence 56899999999999999999999999999999999875 68999999999999863 444566555 36788
Q ss_pred eeCccHHHHHHHHHhC--CCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchh
Q 009507 155 RPYNSILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFS 232 (533)
Q Consensus 155 ~~y~~~~~~l~~l~~~--~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~l 232 (533)
..|.+..+.+.++... .++||+|++ +|+..+..|.+.+ |+.+++++++++..+
T Consensus 73 ~~~~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~~------------------------~~~~~v~~~~~v~~l 127 (131)
T 3il0_A 73 IESKDPLKDIVKFVEVDKLETIGFDNQ-VSFAYYQALQAIF------------------------EGYTLSPQTNFMEEL 127 (131)
T ss_dssp EECSCHHHHHHHHHHHTTCCEEEEETT-SCHHHHHHHHHHT------------------------TTSEEEEESSHHHHH
T ss_pred EEeCCHHHHHHHHHHhcCCCEEEEcCC-CCHHHHHHHHhhc------------------------CCCEEEECchHHHHh
Confidence 8888777777765432 378999999 9999999998754 356788999999999
Q ss_pred hccC
Q 009507 233 KAVK 236 (533)
Q Consensus 233 ravK 236 (533)
|+||
T Consensus 128 R~iK 131 (131)
T 3il0_A 128 RMIK 131 (131)
T ss_dssp HC--
T ss_pred ccCC
Confidence 9998
No 34
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=99.59 E-value=6.1e-16 Score=137.84 Aligned_cols=130 Identities=16% Similarity=0.093 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecC-ceEEEEeCCCCCHHHHhhhhcCCeE
Q 009507 75 VASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVE 153 (533)
Q Consensus 75 ~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~-~~~Lfv~~~~~~~~~~~~l~~~~v~ 153 (533)
+.+|++++|+.|+++|+|++||++++|++||||++|++.. .+++++|+.+ +++||+|..... +++ .. .+++
T Consensus 3 ~~~Rl~~lr~~m~~~~~da~li~~~~ni~yltGf~g~~~e----r~~~lli~~~g~~~l~~d~~~~~-~a~-~~--~~~~ 74 (138)
T 3pn9_A 3 AMSKLQQILTYLESEKLDVAVVSDPVTINYLTGFYSDPHE----RQMFLFVLADQEPLLFVPALEVE-RAS-ST--VSFP 74 (138)
T ss_dssp SCCHHHHHHHHHHHHTCSEEEECCHHHHHHHHSCCCCCTT----SCCEEEEESSSCCEEEEEGGGHH-HHH-HH--CSSC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEcCcCceeeecCCCCCCcc----ceEEEEEeCCCCEEEEEeccchh-hhh-cc--CCCc
Confidence 3579999999999999999999999999999999998753 2368889877 899999965443 444 33 3567
Q ss_pred EeeCc---cHHHHHHHHHh--CCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCc
Q 009507 154 LRPYN---SILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSP 228 (533)
Q Consensus 154 v~~y~---~~~~~l~~l~~--~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 228 (533)
+..|. +..+.+.++.. +.++||+|++.+|+..++.|.+.+ |+.++++++++
T Consensus 75 v~~~~~~~~~~~~l~~~l~~~~~~~vg~e~~~~~~~~~~~l~~~~------------------------~~~~~v~~~~~ 130 (138)
T 3pn9_A 75 VVGYVDSENPWQKIKHALPQLDFKRVAVEFDNLILTKYHGLKTVF------------------------ETAEFDNLTPR 130 (138)
T ss_dssp EEEECTTSCHHHHHHHHSCCCCCCEEEECTTTCCHHHHHHHHHHS------------------------TTCEEEECHHH
T ss_pred EEEEcCCCCHHHHHHHHHHhccCCeEEEecCcCCHHHHHHHHHHC------------------------CCCeeeehHHH
Confidence 77774 45566666543 256899999999999999998754 45678999999
Q ss_pred cchhhccC
Q 009507 229 IAFSKAVK 236 (533)
Q Consensus 229 i~~lravK 236 (533)
+..+|+||
T Consensus 131 i~~lR~iK 138 (138)
T 3pn9_A 131 IQRMRLIK 138 (138)
T ss_dssp HHHHTTCC
T ss_pred HHHHhhcC
Confidence 99999998
No 35
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.50 E-value=1.2e-13 Score=122.23 Aligned_cols=123 Identities=15% Similarity=0.244 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecCceEEEEeCCCCCHHHHhhhhcCCeEE
Q 009507 75 VASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDSKVTPDVMDHLKNAGVEL 154 (533)
Q Consensus 75 ~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~~~~~~~~~~l~~~~v~v 154 (533)
+.+|++++|+.|+++|+|+++|+++.|++||||++|++ ++++++.++++||+|. +...++.+.+. +.++
T Consensus 8 ~~~Rl~~l~~~m~~~~~da~li~~~~n~~YltGf~~~~--------~~~vv~~~~~~l~td~-ry~~qa~~~~~--~~~v 76 (132)
T 3ovk_A 8 LEQRLGHCLRQMAEKGLEALLVTHLTNSYYLTGFSGTA--------ATVLITAKRRVLITDS-RYTLLAKASVE--GFDI 76 (132)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSHHHHHHHHCCCCSC--------CEEEEESSCEEEEECT-TTHHHHHHHCT--TCEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEcCcccceeeeCccCCC--------EEEEEECCccEEEECc-hhHHHHHHhCC--CcEE
Confidence 57899999999999999999999999999999999874 6888899999999985 45556665553 4677
Q ss_pred eeCccHHHHHHHHHh--CCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccchh
Q 009507 155 RPYNSILSEIKSLAA--QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIAFS 232 (533)
Q Consensus 155 ~~y~~~~~~l~~l~~--~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~~l 232 (533)
..|.+..+.+.++.. +.++||+|++ +++..+..|++.+ |+.+++++++++..+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~l------------------------~~~~~v~~~~~v~~l 131 (132)
T 3ovk_A 77 IESRTPLKVVAELLEADQIDCLGFEDQ-VSFSFYQAMQAEL------------------------SGITLLAQSGFVEHL 131 (132)
T ss_dssp EECSCHHHHHHHHHHHHTCCEEEEETT-SBHHHHHHHHHHC------------------------TTCEEEEESSTTGGG
T ss_pred EEeCCCHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHhhC------------------------CCCeEEECchHHHHh
Confidence 777654345544432 4689999999 9999999998754 356788888888887
Q ss_pred h
Q 009507 233 K 233 (533)
Q Consensus 233 r 233 (533)
|
T Consensus 132 R 132 (132)
T 3ovk_A 132 R 132 (132)
T ss_dssp C
T ss_pred C
Confidence 6
No 36
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=99.50 E-value=3.5e-14 Score=126.37 Aligned_cols=130 Identities=14% Similarity=0.156 Sum_probs=101.9
Q ss_pred ccCcCHHHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEe-cCceEEEEeCCCCCHHHHhhhh
Q 009507 70 YAGLDVASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVE-MDRAKLFVDDSKVTPDVMDHLK 148 (533)
Q Consensus 70 ~~g~~~~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~-~~~~~Lfv~~~~~~~~~~~~l~ 148 (533)
|+-.++.+|++++|+.|+++|+|+++|+++.|++||||+.|++ ++++|+ .++++||+|. +...++++.+.
T Consensus 5 ~~~~~~~~Rl~~l~~~m~~~~~da~li~~~~n~~yltGf~~s~--------g~lvv~~~~~a~l~td~-Ry~~qA~~~~~ 75 (135)
T 3qoc_A 5 LADTRFLQRRRALSAQLAAKRIDAMLVTHLTHIRYLSGFTGSN--------AALIINKDLSARISTDG-RYITQIAEQVP 75 (135)
T ss_dssp CCCCHHHHHHHHHHHTHHHHTCSEEEECCHHHHHHHHCCCSSC--------CEEEEETTSCEEEEECG-GGHHHHHHHCT
T ss_pred cChHHHHHHHHHHHHHHHHCCCCEEEEcChhhCeeeecccCCC--------eEEEEeeCCccEEEeCc-HHHHHHHHhCC
Confidence 6667899999999999999999999999999999999999864 689999 8899999985 45556666553
Q ss_pred cCCeEEeeCccHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCc
Q 009507 149 NAGVELRPYNSILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSP 228 (533)
Q Consensus 149 ~~~v~v~~y~~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 228 (533)
++++..+.+..+.|.+.....++||+|++.+++..++.|.+.++. +.++++.+++
T Consensus 76 --~~~i~~~~~~~~~l~~~~~~~~~vG~e~~~ls~~~~~~L~~~l~~-----------------------~~~lv~~~~~ 130 (135)
T 3qoc_A 76 --DIESLMARNCAPALLSDINGPKRVGFEADYLSVSQCEELRKSAGS-----------------------DVELIPVTGA 130 (135)
T ss_dssp --TSEEEECSSHHHHHHHTCCSSEEEEEETTTSBHHHHHHHHHHSCT-----------------------TEEEEEECSC
T ss_pred --CcEEEEeCcHHHHHHhcCcCCCeEEECCCcccHHHHHHHHHhccC-----------------------CcEEEECccH
Confidence 578888877766666533346789999999999999999875421 2567888888
Q ss_pred cchhh
Q 009507 229 IAFSK 233 (533)
Q Consensus 229 i~~lr 233 (533)
|..+|
T Consensus 131 v~~lR 135 (135)
T 3qoc_A 131 IEKLR 135 (135)
T ss_dssp C----
T ss_pred HHHhC
Confidence 88776
No 37
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.46 E-value=4.8e-13 Score=142.96 Aligned_cols=181 Identities=9% Similarity=0.016 Sum_probs=131.9
Q ss_pred CccchhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccCCCcCHHHHHHHHHHHHHhhC--------CCCCCC
Q 009507 227 SPIAFSKAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEI---HNGAKLTEVDVADKLLEFRSKQS--------GFLDTS 295 (533)
Q Consensus 227 ~~i~~lravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i---~~~~g~tE~eia~~l~~~r~~~~--------g~~~~s 295 (533)
+.+..=+-+-|+.-+..+|.|+.+...++..+..++.... .-++|++-.|++...+.+..+.. ...|.+
T Consensus 32 ~~~lkekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIA 111 (614)
T 4b6a_t 32 QILLKDKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKVNERGIA 111 (614)
T ss_dssp ----CCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEE
T ss_pred hhhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCc
Confidence 3344456788999999999999999999988876652110 01577888888887665533211 123578
Q ss_pred CCeEEEecCCcccccccCCCCC-------------------CcccCCCCeEEEEeceeecCcccceeecCcCCCC-----
Q 009507 296 FDTISGSGANGAIIHYKPEPGK-------------------CSVVDSKKLFLLDSGAQYVDGTTDITRTVHFGEP----- 351 (533)
Q Consensus 296 f~~i~~~G~n~a~~hy~p~~~~-------------------~~~i~~gd~vliD~G~~y~gy~tDitRT~~~G~p----- 351 (533)
|||-++ .|....||+|.... +.+|+.||+|.||+|++.+||.+|+++|+.||..
T Consensus 112 FPT~IS--vN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~ 189 (614)
T 4b6a_t 112 IPTTID--IDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKP 189 (614)
T ss_dssp EEEEEE--ETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTST
T ss_pred cCceec--HHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCcccccc
Confidence 987776 57788999996532 3579999999999999999999999999999842
Q ss_pred --------CHHHHHHHHHHHHHHHHHHHcc----------------CCCCCCcchHHHHHHHHHHHcCCC-CcCcccccc
Q 009507 352 --------TAREKECFTRVLQGHIALDQAI----------------FPQSTPGFVLDAFARSSLWKIGLD-YRHGTGHGV 406 (533)
Q Consensus 352 --------~~e~~~~y~~vl~~~~~~~~~~----------------~P~G~~~~~ld~~ar~~l~~~G~~-~~h~~GHGv 406 (533)
+....++..++..|.+++++.+ +| |++..++-.++.+....+|+. ...-+||+|
T Consensus 190 ~~~~~~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~-gvt~~~It~~IekvaksY~ck~Vegl~sH~i 268 (614)
T 4b6a_t 190 ILQPTGPLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSS-GITGQLIRTIVDTIARSYNCGVVPGSRVRRI 268 (614)
T ss_dssp TTTTTSCBCHHHHHHHHHHHHHHHHHHHHC----------------ST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEE
T ss_pred cccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCC-CcchHHHHHHHHHHHhcCCcEEecccccccc
Confidence 2233345555555555555544 88 999999999999999999986 445579999
Q ss_pred ccCC
Q 009507 407 GAAL 410 (533)
Q Consensus 407 G~~l 410 (533)
+.|+
T Consensus 269 ~r~~ 272 (614)
T 4b6a_t 269 RRFL 272 (614)
T ss_dssp BTTB
T ss_pred ccee
Confidence 9773
No 38
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.31 E-value=2.1e-12 Score=114.13 Aligned_cols=125 Identities=15% Similarity=0.138 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecC-ceEEEEeCCCCCHHHHhhhhcCCeEE
Q 009507 76 ASKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVEL 154 (533)
Q Consensus 76 ~~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~-~~~Lfv~~~~~~~~~~~~l~~~~v~v 154 (533)
.+|++++|+.|+++|+|+++|+++.|++||||+.|+... .| .+++|+.+ +++||+|.. ...+++... +.++
T Consensus 2 ~~Rl~~l~~~m~~~glDa~li~~~~ni~YltGf~~~~~e-r~---~~l~v~~~g~~~l~~~~~-y~~~a~~~~---~~~i 73 (132)
T 3o5v_A 2 NAKLDQIRLYLDQKGAELAIFSDPVTINYLTGFFCDPHE-RQ---LFLFVYHDLAPVLFVPAL-EVARASQAI---SFPV 73 (132)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECCHHHHHHHHSCCCCCTT-SC---CEEEEESSSCCEEEEEGG-GHHHHHHHC---CSCE
T ss_pred hHHHHHHHHHHHHCCCCEEEEcCcchhhHhhCCCCCCcc-ce---EEEEEeCCCCEEEEeehh-hhHHHHhcC---CCcE
Confidence 369999999999999999999999999999999987522 22 57888876 799999953 334444433 3456
Q ss_pred eeCc---cHHHHHHHHHhC--CCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCcc
Q 009507 155 RPYN---SILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPI 229 (533)
Q Consensus 155 ~~y~---~~~~~l~~l~~~--~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i 229 (533)
..|. +..+.|.+.... .++||+|.+.+++..+..|++.+ | +++++++..+
T Consensus 74 ~~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~------------------------~-~~~~~~~~~v 128 (132)
T 3o5v_A 74 FGYVDSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIF------------------------S-GQFNNLTPYV 128 (132)
T ss_dssp EEECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHTTC------------------------C-SEEEECHHHH
T ss_pred EEEECCCCHHHHHHHHHhhccCCeEEEecCCCCHHHHHHHHHhC------------------------C-CceeccHHHH
Confidence 6663 455566665432 35899999999999999987642 3 5677777777
Q ss_pred chhh
Q 009507 230 AFSK 233 (533)
Q Consensus 230 ~~lr 233 (533)
..+|
T Consensus 129 ~~lR 132 (132)
T 3o5v_A 129 QGMR 132 (132)
T ss_dssp HTC-
T ss_pred HHhC
Confidence 6665
No 39
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=99.30 E-value=3.3e-12 Score=112.84 Aligned_cols=124 Identities=16% Similarity=0.108 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecC-ceEEEEeCCCCCHHHHhhhhcCCeEEe
Q 009507 77 SKLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVELR 155 (533)
Q Consensus 77 ~Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~-~~~Lfv~~~~~~~~~~~~l~~~~v~v~ 155 (533)
+|++++|+.|+++|+|+++|+++.|++||||+.|+. ...| .+++|+.+ +++||+|.. ...++++.. +.++.
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~-~er~---~~l~v~~~g~~~l~~~~~-y~~~a~~~~---~~~v~ 74 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDPVTVNYLTGFFCDP-HERQ---MFLFVYEDRDPILFVPAL-EVSRAKQSV---PFPVF 74 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCHHHHHHHHSCCCCC-TTSC---CEEEEESSSCCEEEEEGG-GHHHHHHHC---SSCEE
T ss_pred hHHHHHHHHHHHCCCCEEEEcCcchHHHHhCCCCCC-Ccce---EEEEEeCCCCEEEEEecc-chHHHHhcC---CCcEE
Confidence 699999999999999999999999999999999864 2223 46788866 699999853 333444433 45566
Q ss_pred eCc---cHHHHHHHHHhC--CCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCccccCCccc
Q 009507 156 PYN---SILSEIKSLAAQ--GAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGVFRTSPIA 230 (533)
Q Consensus 156 ~y~---~~~~~l~~l~~~--~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~i~ 230 (533)
.|. +..+.+.+.... .++||+|.+.+++..+..|++.+ | +++++++..+.
T Consensus 75 ~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~------------------------~-~~~~~~~~~v~ 129 (132)
T 3ooo_A 75 GYIDSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVF------------------------D-GHFENLTPYIQ 129 (132)
T ss_dssp EECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHC------------------------C-SEEEECCHHHH
T ss_pred EEeCCCCHHHHHHHHHhhccCCeEEEecCCcCHHHHHHHHHhC------------------------C-cceechHHHHH
Confidence 663 456666665432 35899999999999999998753 3 56778887777
Q ss_pred hhh
Q 009507 231 FSK 233 (533)
Q Consensus 231 ~lr 233 (533)
.+|
T Consensus 130 ~lR 132 (132)
T 3ooo_A 130 NMR 132 (132)
T ss_dssp TTC
T ss_pred hcC
Confidence 766
No 40
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=99.29 E-value=2.5e-12 Score=114.74 Aligned_cols=126 Identities=14% Similarity=0.076 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHcCCCEEEEccCCccccccCcccCCCCCCcceeEEEEEecC-ceEEEEeCCCCCHHHHhhhhcCCeEEee
Q 009507 78 KLSSLRSDLVDAGSSAIVISMLDEIAWLLNLRGSDVPHSPVMYAYLIVEMD-RAKLFVDDSKVTPDVMDHLKNAGVELRP 156 (533)
Q Consensus 78 Ki~~lr~~m~~~g~dallls~~d~IawL~n~rg~di~~~Pv~~s~liv~~~-~~~Lfv~~~~~~~~~~~~l~~~~v~v~~ 156 (533)
|++++|+.|+++|+|++||+++.|++||||+.|+. ...| .+++|+.+ +++||+|.. ...++++... +.++..
T Consensus 5 Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~-~er~---~~llv~~~g~~~l~~~~~-~~~~a~~~~~--~~~i~~ 77 (140)
T 3i7m_A 5 KLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGSDP-IERV---LALVVFPDQDPFIFAPAL-EVEVIKETGW--QFPVIG 77 (140)
T ss_dssp HHHHHHHHHHHTTCSEEEECCHHHHHHHHCCCCCC-CSSC---CEEEECSSSCCEEEEEGG-GHHHHHTTTC--CSCEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCcceeecCCCCCC-ccce---EEEEEeCCCCEEEEEecc-cHHHHHhccC--cCcEEE
Confidence 99999999999999999999999999999999864 2223 47888865 799999853 3344544432 345555
Q ss_pred Cc---cHHHHHHHHHh----CCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccCCCCCCCCCCcc-ccCCc
Q 009507 157 YN---SILSEIKSLAA----QGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTDTTGQSGGPAGV-FRTSP 228 (533)
Q Consensus 157 y~---~~~~~l~~l~~----~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-d~~~~ 228 (533)
|. +..+.+.++.. ..++||+|.+.+++..+..|++.+ |+++++ +++..
T Consensus 78 ~~d~~~~~~~l~~~l~~~~~~~~~ig~e~~~~~~~~~~~L~~~l------------------------~~~~~v~~~~~~ 133 (140)
T 3i7m_A 78 YLDHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQF------------------------SAPSFDLDITSF 133 (140)
T ss_dssp ECTTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHTTS------------------------SSCEEEEECHHH
T ss_pred EcCCCCHHHHHHHHHHHhCCCCCeEEEccCCCCHHHHHHHHHHC------------------------CCCEEecCHHHH
Confidence 53 44455544432 347899999999999999998643 467788 88888
Q ss_pred cchhhc
Q 009507 229 IAFSKA 234 (533)
Q Consensus 229 i~~lra 234 (533)
+..+|+
T Consensus 134 i~~lR~ 139 (140)
T 3i7m_A 134 IEHMRG 139 (140)
T ss_dssp HHHC--
T ss_pred HHHHHc
Confidence 888886
No 41
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=99.12 E-value=3.3e-11 Score=133.12 Aligned_cols=158 Identities=11% Similarity=0.097 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHcC-----CCEEEEcc------------CCccccccCcccCCCCCCcceeEEEEEecCceEEEEeCC
Q 009507 75 VASKLSSLRSDLVDAG-----SSAIVISM------------LDEIAWLLNLRGSDVPHSPVMYAYLIVEMDRAKLFVDDS 137 (533)
Q Consensus 75 ~~~Ki~~lr~~m~~~g-----~dallls~------------~d~IawL~n~rg~di~~~Pv~~s~liv~~~~~~Lfv~~~ 137 (533)
..+|+++||+.|++++ +||+||++ ..+++||+||.|+. ++++|+.+++.||+|.
T Consensus 6 ~~~Rl~~LR~~m~~~~~~~~~lda~lv~~~D~h~sey~~~~~~~~~ylsGFtGSa--------G~~vVt~~~a~l~tDg- 76 (623)
T 3ctz_A 6 TSELLRQLRQAMRNSEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA--------GTAIITEEHAAMWTDG- 76 (623)
T ss_dssp CHHHHHHHHHHTTCTTTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSC--------CEEEEESSCEEEEECG-
T ss_pred HHHHHHHHHHHHHhcCCCCCceeEEEECCCCccccccccchhccceeccCcCCCc--------eEEEEecCeeEEEECc-
Confidence 4789999999999999 99999999 88999999999985 7999999999999985
Q ss_pred CCCHHHHhhhhcCCeEEeeCc-----cHHHHHHHHHhCCCeEEEeCCCchHHHHHHHHHHHhhhhhcccccccccccccC
Q 009507 138 KVTPDVMDHLKNAGVELRPYN-----SILSEIKSLAAQGAQLWLDPSSVNAAIMNTYEIAIEKYLTSNNNKKSKTKMHTD 212 (533)
Q Consensus 138 ~~~~~~~~~l~~~~v~v~~y~-----~~~~~l~~l~~~~~~i~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 212 (533)
++..++.+.+. .++++.... .+.+.|++....+++||+|+..++...++.|.+.+...
T Consensus 77 RY~~QA~~ql~-~~~~l~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~l~~~l~~~---------------- 139 (623)
T 3ctz_A 77 RYFLQAAKQMD-SNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSA---------------- 139 (623)
T ss_dssp GGHHHHHHHBC-TTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHHhcC-CceEEEEecCCCCccHHHHHHHhCcCCCEEEECcccccHHHHHHHHHHHHhc----------------
Confidence 66677888875 357776533 56778877555678999999999999999998876421
Q ss_pred CCCCCCCCCcccc-CCccchh---hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 009507 213 TTGQSGGPAGVFR-TSPIAFS---KAVKNSAELEGMLNSHLRDAAALAQFWVWLEEEI 266 (533)
Q Consensus 213 ~~~~~~~~~~vd~-~~~i~~l---ravK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i 266 (533)
+.++++. .+++..+ |.+|++.| .++.+..+++.++..-+..+.+.+
T Consensus 140 ------~~~lv~~~~~lvd~iw~~Rp~k~~~e--~~~~~~~~ag~~~~~rl~~lr~~m 189 (623)
T 3ctz_A 140 ------GHHLIPVKENLVDKIWTDRPERPCKP--LLTLGLDYTGISWKDKVADLRLKM 189 (623)
T ss_dssp ------TCEEEECSSCHHHHHCTTCCCCCCCC--CEECCHHHHSSCHHHHHHHHHHHH
T ss_pred ------CCEEEecCCCcHHHHhhcCCCCCchh--hhhcchhhcChhHHHHHHHHHHHH
Confidence 3456777 5899999 99999999 888888888888776666664443
No 42
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=94.88 E-value=0.044 Score=55.94 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCC-cCccccccccCCcc-----ccCCCCCCCcCCCCc
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDY-RHGTGHGVGAALNV-----HEGPQSISFRYGNMT 427 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~-~h~~GHGvG~~l~v-----hE~P~~i~~~~~~~~ 427 (533)
..|++-+.+.+++..+.+.++| |++..||+..+.+.+.+.|..- ..|.|.-+. +++ |--|. - ..++.
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikp-G~t~~el~~~~e~~i~~~~~~~~~~g~~FP~c--iSvN~~v~Hg~P~-~---~~~~~ 119 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAG--MSMNSCAAHYTVN-P---GEQDI 119 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEE--EEETTEEECCCCC-T---TCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHhcCCCcccCCCCCcE--EeeCCEEEecCCC-C---CCCCe
Confidence 4578888889999999999999 9999999999999998876521 111122111 222 33343 1 01467
Q ss_pred cccCCCEEecCcceeecCcce
Q 009507 428 PLVEGMIVSNEPGYYEDHAFG 448 (533)
Q Consensus 428 ~L~~GMv~siEPg~y~~g~~G 448 (533)
+|++|.++.+.-|.+..|..|
T Consensus 120 ~L~~GDiV~ID~G~~~dGY~s 140 (358)
T 3fm3_A 120 VLKEDDVLKIDFGTHSDGRIM 140 (358)
T ss_dssp BCCTTCEEEEEEEEEETTEEE
T ss_pred EecCCCEEEEEeeEEECCEEE
Confidence 899999999999999988655
No 43
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=93.14 E-value=0.22 Score=50.22 Aligned_cols=87 Identities=18% Similarity=0.056 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc----CccccccccCCcccc-CCCCCCCcCCCCcc
Q 009507 354 REKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHE-GPQSISFRYGNMTP 428 (533)
Q Consensus 354 e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~----h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~ 428 (533)
.+|++-..+.+++..+.+.++| |++-.+|+.++.+.+.++|.... ++....+. .+.++ .|..+ .++.+
T Consensus 71 ~mR~A~~i~~~a~~~~~~~ikp-G~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~--~g~n~~~~H~~----~~~~~ 143 (337)
T 4fuk_A 71 RIKTVCQLSREVLDIATAAAKP-GITTDELDRIVHEATVERNMYPSPLNYYGFPKSVC--TSVNEVICHGI----PDSRE 143 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEECCC----CCSCB
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceee--ccccccccCCC----CCCcc
Confidence 4577888888999999999999 99999999999999998886311 01111111 11111 12111 15678
Q ss_pred ccCCCEEecCcceeecCcc
Q 009507 429 LVEGMIVSNEPGYYEDHAF 447 (533)
Q Consensus 429 L~~GMv~siEPg~y~~g~~ 447 (533)
|++|.++.+.-|.+..|..
T Consensus 144 l~~GD~v~iD~g~~~~GY~ 162 (337)
T 4fuk_A 144 LEEGDILNIDVSSYLNGFH 162 (337)
T ss_dssp CCTTCEEEEEEEEEETTEE
T ss_pred ccCCCEEEEecceeECCEE
Confidence 9999999999998877654
No 44
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=91.20 E-value=0.52 Score=46.57 Aligned_cols=95 Identities=14% Similarity=0.054 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC--CcCccccccccCCccccCCCCCCCcCCCCcccc
Q 009507 353 AREKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLV 430 (533)
Q Consensus 353 ~e~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~--~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~ 430 (533)
+..|++-..+.+++..+.+.++| |++-.+|+..+.+.+.+.|.. |+..+ +++.. ..|--|. +.++.+|+
T Consensus 4 ~~mr~A~~i~~~~l~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~fp~~v--s~n~~-~~H~~p~-----~~~~~~L~ 74 (295)
T 1xgs_A 4 EKLMKAGEIAKKVREKAIKLARP-GMLLLELAESIEKMIMELGGKPAFPVNL--SINEI-AAHYTPY-----KGDTTVLK 74 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEESSCCEE--EETTE-EECCCCC-----TTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHcCCCCCCCcEE--eeCCc-cccccCC-----CCCCcccc
Confidence 35678888889999999999999 999999999999999998874 33222 22321 1233331 11357899
Q ss_pred CCCEEecCcceeecCcceEEEEEeEEE
Q 009507 431 EGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 431 ~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|.++.+.-|....|.. .=+..|+.|
T Consensus 75 ~GDiv~iD~G~~~~GY~-sD~tRT~~v 100 (295)
T 1xgs_A 75 EGDYLKIDVGVHIDGFI-ADTAVTVRV 100 (295)
T ss_dssp TTCEEEEEEEEEETTEE-EEEEEEEET
T ss_pred CCCEEEEEEeEEECCEE-EEEEEEEEe
Confidence 99999999998776533 333444444
No 45
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=91.13 E-value=0.53 Score=45.49 Aligned_cols=95 Identities=14% Similarity=0.011 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc----CccccccccCCcccc-CCCCCCCcCCCCccc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHE-GPQSISFRYGNMTPL 429 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~----h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~L 429 (533)
.|++-..+.+++.++.+.++| |++-.+|++.++..+.+.|-... .+....+. .+.+. .|... .++.+|
T Consensus 13 mr~A~~i~~~a~~~~~~~ikp-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~--~g~~~~~~H~~----~~~~~l 85 (264)
T 3tb5_A 13 MDESGELLADVHRHLRTFIKP-GITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATC--CSINDEICHGF----PRKKVL 85 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEE--EEETTEEECCC----CCSCBC
T ss_pred HHHHHHHHHHHHHHHHHhCcC-CCCHHHHHHHHHHHHHHcCCCcccccccCCCcceE--ECCcccccCCC----CCCccc
Confidence 356667778889999999999 99999999999999999886311 11111111 11111 11111 156789
Q ss_pred cCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 430 VEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 430 ~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
++|.++.+.-|....|. -.=+..|+.|
T Consensus 86 ~~Gdlv~iD~g~~~~GY-~sD~tRT~~v 112 (264)
T 3tb5_A 86 KDGDLIKVDMCVDLKGA-ISDSCWSYVV 112 (264)
T ss_dssp CTTCEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred cCCCEEEEeccceecce-eeeccccccc
Confidence 99999999988776653 3334444444
No 46
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=89.70 E-value=0.86 Score=45.73 Aligned_cols=94 Identities=15% Similarity=0.038 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc----CccccccccCCcccc-CCCCCCCcCCCCcccc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHE-GPQSISFRYGNMTPLV 430 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~----h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~L~ 430 (533)
|++...+.+++.++.+.++| |++-.+|++.+.+.+.+.|.... ++..-.+. .++++ -|..+ + ++.+|+
T Consensus 85 R~A~~ia~~al~~~~~~i~p-Gvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~--sg~n~~~~H~~---p-~~~~L~ 157 (329)
T 2b3h_A 85 RLVCRLAREVLDVAAGMIKP-GVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCC--TSVNEVICHGI---P-DRRPLQ 157 (329)
T ss_dssp HHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEECCC---C-CSCBCC
T ss_pred HHHHHHHHHHHHHHHHHhhC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCeEE--ecCCCCcCCCC---C-CCcCCC
Confidence 45566667788889999999 99999999999999999886310 01111111 11111 11111 1 457899
Q ss_pred CCCEEecCcceeecCcceEEEEEeEEE
Q 009507 431 EGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 431 ~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|.++.+.-|.+..|. -.=+..|+.|
T Consensus 158 ~GDiv~iD~G~~~~GY-~sD~tRT~~v 183 (329)
T 2b3h_A 158 EGDIVNVDITLYRNGY-HGDLNETFFV 183 (329)
T ss_dssp TTCEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred CCCEEEEEeeEEECCE-EEeeEEEEEe
Confidence 9999999988877553 3334444444
No 47
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=89.47 E-value=0.2 Score=43.40 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=31.8
Q ss_pred CCCCeEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhh
Q 009507 7 EAELALIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 50 (533)
Q Consensus 7 ~~~~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~i 50 (533)
..+.+||||+..+|.+.+++|++.|.. +++++++ .++|+.+
T Consensus 94 ~~~~~vG~e~~~ls~~~~~~L~~~l~~-~~~lv~~--~~~v~~l 134 (135)
T 3qoc_A 94 NGPKRVGFEADYLSVSQCEELRKSAGS-DVELIPV--TGAIEKL 134 (135)
T ss_dssp CSSEEEEEETTTSBHHHHHHHHHHSCT-TEEEEEE--CSCC---
T ss_pred cCCCeEEECCCcccHHHHHHHHHhccC-CcEEEEC--ccHHHHh
Confidence 456799999999999999999988853 4788885 6788764
No 48
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=88.47 E-value=1.2 Score=45.46 Aligned_cols=94 Identities=13% Similarity=0.037 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc----CccccccccCCccccC-CCCCCCcCCCCcccc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHEG-PQSISFRYGNMTPLV 430 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~----h~~GHGvG~~l~vhE~-P~~i~~~~~~~~~L~ 430 (533)
|++...+.+++.++.+.++| |++-.+|++.+.+.+.+.|.... ++..-.|+ .++++. |..+ + ++.+|+
T Consensus 113 R~A~~ia~~al~~~~~~ikp-GvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~--sg~N~~i~H~~---p-~~r~L~ 185 (368)
T 3s6b_A 113 REACILGRKTLDYAHTLVSP-GVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCC--TSVNEIVCHGI---P-DYRPLK 185 (368)
T ss_dssp HHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTEEECCC---C-CSCBCC
T ss_pred HHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCCeEE--EcCccccccCC---C-CCcccc
Confidence 55666777788889999999 99999999999999999886311 11111122 122221 1111 1 457899
Q ss_pred CCCEEecCcceeecCcceEEEEEeEEE
Q 009507 431 EGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 431 ~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|.++.+.-|.+..| |-.=+..|+.|
T Consensus 186 ~GDiV~iD~G~~~~G-Y~sDitRT~~v 211 (368)
T 3s6b_A 186 SGDIINIDISVFYKG-VHSDLNETYFV 211 (368)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCEEEEEEeEEECc-EEEEEEEEEEE
Confidence 999999999987765 33445555555
No 49
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=87.39 E-value=0.63 Score=48.07 Aligned_cols=99 Identities=13% Similarity=-0.012 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC-CCc------CccccccccCCcccc-CCCCCCCcCC-C
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL-DYR------HGTGHGVGAALNVHE-GPQSISFRYG-N 425 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~-~~~------h~~GHGvG~~l~vhE-~P~~i~~~~~-~ 425 (533)
.|++-..+.+++..+.+.++| |++-.+|+..+.+.+.+.|. .|. .+..+.+. .++.+ -|..+. .++ +
T Consensus 28 mR~A~~i~~~~l~~~~~~ikp-Gvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~~--vS~N~~v~H~~P-~~~d~ 103 (401)
T 2q8k_A 28 YKMGGDIANRVLRSLVEASSS-GVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTS--ISVNNCVCHFSP-LKSDQ 103 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEE--EEETTEEECCCC-CTTSC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCcE--EeCCcccccCCC-CCCCC
Confidence 355666677788889999999 99999999999998888663 121 12222222 22222 121111 012 2
Q ss_pred CccccCCCEEecCcceeecCcceEEEEEeEEEe
Q 009507 426 MTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVK 458 (533)
Q Consensus 426 ~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt 458 (533)
+.+|++|.++.+.-|....|.+ .=+..|++|.
T Consensus 104 ~~~L~~GDiV~ID~G~~~~GY~-sD~tRT~~vG 135 (401)
T 2q8k_A 104 DYILKEGDLVKIDLGVHVDGFI-ANVAHTFVVD 135 (401)
T ss_dssp CCBCCTTCEEEEEEEEEETTEE-EEEEEEEETT
T ss_pred CcccCCCCEEEEEEEEEECCEE-EEEEEEEEEC
Confidence 4689999999999998776643 3455566554
No 50
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=87.36 E-value=1.1 Score=45.48 Aligned_cols=94 Identities=14% Similarity=0.098 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc-Ccccc--ccccCCc---cccCCCCCCCcCCC-Cc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR-HGTGH--GVGAALN---VHEGPQSISFRYGN-MT 427 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~-h~~GH--GvG~~l~---vhE~P~~i~~~~~~-~~ 427 (533)
.|++-..+.+++..+.+.++| |++-.+|...+.+.+.+.|-.-. .+.+. ++| .+ .|-.|. .++ +.
T Consensus 50 mR~A~~I~~~a~~~~~~~ikp-G~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~s--~N~~~~H~~P~-----~~d~~~ 121 (360)
T 2nw5_A 50 ARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMS--MNSCAAHYTVN-----PGEQDI 121 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEE--ETTEEECCCCC-----TTCCCC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHhcCCCccCccccCceee--ccccccCCCCC-----cccCCc
Confidence 355666677788889999999 99999999999998888764211 00111 122 11 132221 112 57
Q ss_pred cccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 428 PLVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 428 ~L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|++|.++.+.-|....|. -.=+..|+.|
T Consensus 122 ~L~~GDlV~ID~G~~~~GY-~sD~tRT~~v 150 (360)
T 2nw5_A 122 VLKEDDVLKIDFGTHSDGR-IMDSAFTVAF 150 (360)
T ss_dssp BCCTTCEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred CcCCCCEEEEEEEEEECCE-EEEEEEEEEc
Confidence 8999999999998876653 3333444444
No 51
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=87.09 E-value=1.8 Score=41.31 Aligned_cols=92 Identities=17% Similarity=0.078 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC--------CcCccccccccCCccccCCCCCCCcCCCC
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--------YRHGTGHGVGAALNVHEGPQSISFRYGNM 426 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~--------~~h~~GHGvG~~l~vhE~P~~i~~~~~~~ 426 (533)
.|++-..+.+++..+.+.++| |++-.+|...+.+.+.+.|.. |+..+.=|... .-.|-.| ++
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~-~~~H~~p--------~~ 81 (252)
T 1qxy_A 12 LKEIGYICAKVRNTMQAATKP-GITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNE-EVAHGIP--------SK 81 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETT-EEECCCC--------CS
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCc-cccCCCC--------CC
Confidence 355666677788888999999 999999999999999988863 11111111110 0122222 45
Q ss_pred ccccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 427 TPLVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 427 ~~L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
.+|++|.++.+.-|....| |-.-+..|+.|
T Consensus 82 ~~l~~gd~v~iD~g~~~~g-y~sD~tRT~~v 111 (252)
T 1qxy_A 82 RVIREGDLVNIDVSALKNG-YYADTGISFVV 111 (252)
T ss_dssp CBCCTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred cCcCCCCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 6899999999998876654 33445555555
No 52
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=85.52 E-value=2.4 Score=41.42 Aligned_cols=94 Identities=15% Similarity=0.012 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc----CccccccccCCcccc-CCCCCCCcCCCCcccc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR----HGTGHGVGAALNVHE-GPQSISFRYGNMTPLV 430 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~----h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~L~ 430 (533)
|++...+.+++..+.+.++| |++-.+|...+...+.+.|.... .+..-.++ .+.+. -|+ +.+ ++.+|+
T Consensus 51 r~A~~i~~~a~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p-~~~~l~ 123 (285)
T 3pka_A 51 RVAGRIAAGALAEAGKAVAP-GVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCC--TSLNEVICH---GIP-DSTVIT 123 (285)
T ss_dssp HHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEEC---CCC-CSCBCC
T ss_pred HHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCceE--ecccceeec---CCC-CCcccC
Confidence 55666677788888899999 99999999999999999886311 01111121 11111 111 111 457899
Q ss_pred CCCEEecCcceeecCcceEEEEEeEEE
Q 009507 431 EGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 431 ~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|.++.+.-|....| |-.-+..|+.|
T Consensus 124 ~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 149 (285)
T 3pka_A 124 DGDIVNIDVTAYIGG-VHGDTNATFPA 149 (285)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 999999998876544 33334444444
No 53
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=85.39 E-value=2.4 Score=40.75 Aligned_cols=95 Identities=13% Similarity=0.035 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCc--Ccccc--ccccCCcccc-CCCCCCCcCCCCccc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYR--HGTGH--GVGAALNVHE-GPQSISFRYGNMTPL 429 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~--h~~GH--GvG~~l~vhE-~P~~i~~~~~~~~~L 429 (533)
.|++...+.+++..+.+.++| |++-.+|.+.+.+.+.+.|.... ...|+ .+. .+.+. -|+ +.+ ++.+|
T Consensus 17 ~r~A~~i~~~~~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p-~~~~l 89 (262)
T 3mx6_A 17 MRAAGKLAAETLDFITDHVKP-NVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSIC--TSINHVVCH---GIP-NDKPL 89 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEEC---CCC-CSCBC
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceE--ecccccccC---CCC-CCccc
Confidence 456666777788888999999 99999999999999999886311 00111 111 11111 111 111 45689
Q ss_pred cCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 430 VEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 430 ~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
++|.++.+.-|....| |-.-+..|+.|
T Consensus 90 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 116 (262)
T 3mx6_A 90 KNGDIVNIDVTVILDG-WYGDTSRMYYV 116 (262)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 9999999998876554 33334444444
No 54
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=84.20 E-value=2.8 Score=40.27 Aligned_cols=94 Identities=16% Similarity=0.098 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC--CcC--ccccccccCCcccc-CCCCCCCcCCCCcc-c
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRH--GTGHGVGAALNVHE-GPQSISFRYGNMTP-L 429 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~--~~h--~~GHGvG~~l~vhE-~P~~i~~~~~~~~~-L 429 (533)
|++-..+.+++..+.+.++| |++-.+|...+.+.+.+.|.. |.. +....|. .+.++ -|. +.+ ++.+ |
T Consensus 26 r~A~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~--~g~n~~~~H---~~p-~~~~~l 98 (262)
T 1o0x_A 26 KKAGKAVAVALREVRKVIVP-GKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATC--VSVNEEVVH---GLP-LKEKVF 98 (262)
T ss_dssp HHHHHHHHHHHHHGGGGCST-TCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEE--EEETTBCSC---CCC-CTTCBC
T ss_pred HHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCcceE--ecccccccC---CCC-CCCccc
Confidence 45556666777888889999 999999999999999998873 211 1111121 11222 121 112 3566 9
Q ss_pred cCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 430 VEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 430 ~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
++|.++.+.-|....| |-.-+..|+.|
T Consensus 99 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 125 (262)
T 1o0x_A 99 KEGDIVSVDVGAVYQG-LYGDAAVTYIV 125 (262)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred CCCCEEEEEEEEEECC-EEEEEEEEEEC
Confidence 9999999998876544 33334444444
No 55
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=83.45 E-value=3.1 Score=39.88 Aligned_cols=96 Identities=15% Similarity=0.060 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHH-HHHcCCCCc----CccccccccCCcccc-CCCCCCCcCCCCcc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSS-LWKIGLDYR----HGTGHGVGAALNVHE-GPQSISFRYGNMTP 428 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~-l~~~G~~~~----h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~ 428 (533)
.|++-..+.+++..+.+.++| |++-.+|...+.+. +.+.|.... .+...-+. .+.+. -|. +.+.+..+
T Consensus 13 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p~~~~~ 86 (263)
T 2gg2_A 13 MRVAGRLAAEVLEMIEPYVKP-GVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVC--ISINEVVCH---GIPDDAKL 86 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGCST-TCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSE--EEETTEEEC---CCCCTTCB
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHhCCccccccccCCCcceE--ecccccccC---CCCCCCcC
Confidence 355666667788888999999 99999999999998 888876321 01111111 11111 011 11112268
Q ss_pred ccCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 429 LVEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 429 L~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
|++|.++.+.-|....| |-.-+..|+.|
T Consensus 87 l~~gd~v~iD~G~~~~g-y~sD~tRT~~v 114 (263)
T 2gg2_A 87 LKDGDIVNIDVTVIKDG-FHGDTSKMFIV 114 (263)
T ss_dssp CCTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred cCCCCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 99999999998876654 33344455544
No 56
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=82.76 E-value=3.5 Score=40.25 Aligned_cols=96 Identities=18% Similarity=0.095 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC--CcCcccc--ccccCCcccc-CCCCCCCcCCCCccc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD--YRHGTGH--GVGAALNVHE-GPQSISFRYGNMTPL 429 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~--~~h~~GH--GvG~~l~vhE-~P~~i~~~~~~~~~L 429 (533)
.|++...+.+++..+.+.++| |++-.+|...+...+.+.|.. |....++ -++ .+.+. -|.. .+..+.+|
T Consensus 43 ~r~A~~i~~~a~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~~~H~---~p~~~~~l 116 (286)
T 3tav_A 43 MAAAGSIVGAALVAVRDAAKA-GVSTLELDQVAESVIREAGAVPSFLGYHGFPASIC--SSVNDQVVHG---IPSATAVL 116 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTBCSCC---CCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCCceE--EecCccccCC---CCCCCccc
Confidence 356666777788888999999 999999999999999998863 1100111 111 11111 1221 11126789
Q ss_pred cCCCEEecCcceeecCcceEEEEEeEEE
Q 009507 430 VEGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 430 ~~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
++|.++.+.-|....| |-.-+..|+.|
T Consensus 117 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 143 (286)
T 3tav_A 117 ADGDLVSIDCGAILDG-WHGDSAWTFAV 143 (286)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred CCCCEEEEEEEEEECC-EEEeeEEEEEC
Confidence 9999999998876554 33334444443
No 57
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=80.36 E-value=1.5 Score=37.40 Aligned_cols=38 Identities=11% Similarity=-0.011 Sum_probs=31.9
Q ss_pred CCCeEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhh
Q 009507 8 AELALIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 50 (533)
Q Consensus 8 ~~~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~i 50 (533)
.+.+||||+. +|...+++|++.|. +++++++ .++|+.+
T Consensus 94 ~~~~ig~e~~-~~~~~~~~L~~~l~--~~~~v~~--~~~v~~l 131 (132)
T 3ovk_A 94 QIDCLGFEDQ-VSFSFYQAMQAELS--GITLLAQ--SGFVEHL 131 (132)
T ss_dssp TCCEEEEETT-SBHHHHHHHHHHCT--TCEEEEE--SSTTGGG
T ss_pred CCCEEEEcCC-CCHHHHHHHHhhCC--CCeEEEC--chHHHHh
Confidence 3579999999 99999999998874 5788885 6888875
No 58
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=80.26 E-value=1.9 Score=45.39 Aligned_cols=82 Identities=18% Similarity=0.158 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchH----HHHHHHHHHHcCCC----CcCccccccccCCccccCCCCCCCcCCCCc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVL----DAFARSSLWKIGLD----YRHGTGHGVGAALNVHEGPQSISFRYGNMT 427 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~l----d~~ar~~l~~~G~~----~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~ 427 (533)
|++-..+.+++..+...++| |++-.+| +..+++.+.+.|.. |+..+ +++.. .+|--|. .+++.
T Consensus 170 R~A~~Ia~~al~~~~~~ikp-GvTe~ELa~~le~~~~~~i~~~Ga~~g~~FP~iv--SvN~~-v~Hg~P~-----~~d~r 240 (478)
T 1b6a_A 170 REAAEAHRQVRKYVMSWIKP-GMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGC--SLNNC-AAHYTPN-----AGDTT 240 (478)
T ss_dssp HHHHHHHHHHHHHHHHHCCT-TSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEE--EETTE-EECCCCC-----TTCCC
T ss_pred HHHHHHHHHHHHHHhhhcCC-CCcHHHHHHHHHHHHHHHHHhcCCcccCCCCeEE--ECCCc-cccCCCC-----cccCc
Confidence 45556667777888899999 9999999 44455555455652 22111 11111 1122221 11247
Q ss_pred cccCCCEEecCcceeecCc
Q 009507 428 PLVEGMIVSNEPGYYEDHA 446 (533)
Q Consensus 428 ~L~~GMv~siEPg~y~~g~ 446 (533)
+|++|.++.+.-|....|.
T Consensus 241 ~Lk~GDiV~ID~G~~~dGY 259 (478)
T 1b6a_A 241 VLQYDDICKIDFGTHISGR 259 (478)
T ss_dssp BCCTTCCEEEEEEEEETTE
T ss_pred cccCCCeEEEEEEEEECCE
Confidence 8999999999998877654
No 59
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=79.76 E-value=5 Score=40.78 Aligned_cols=93 Identities=15% Similarity=0.061 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCccccccccCCcccc-CCCCCCCcCCCCccccCCCE
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHE-GPQSISFRYGNMTPLVEGMI 434 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~L~~GMv 434 (533)
|++...+-+++..+.+.++| |++-.+|...+...+.+.|......+ -++ -+.+. .|+.. + ++.+|++|.+
T Consensus 160 r~A~~i~~~a~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~f~--iv~--sG~n~~~~H~~---~-~~~~l~~Gd~ 230 (378)
T 4ege_A 160 AKAGAAIDRVHARVPAFLVP-GRTEAQVAADIAEAIVAEGHSAVAFV--IVG--SGPHGADPHHG---Y-SDRKLQVGDI 230 (378)
T ss_dssp HHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCSEEEEE--EEE--EGGGGGCTTCC---C-CSCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCCCCCee--EEE--eeCCCCccCCC---C-CCCCcCCCCE
Confidence 45566667777888899999 99999999999999999887421111 111 01111 13211 1 4578999999
Q ss_pred EecCcceeecCcceEEEEEeEEE
Q 009507 435 VSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 435 ~siEPg~y~~g~~GiriEd~v~V 457 (533)
+.+.-|....+.|-.-+..|+.|
T Consensus 231 v~iD~G~~~~~GY~sD~tRT~~v 253 (378)
T 4ege_A 231 VVVDIGGTYEPGYYSDSTRTYSI 253 (378)
T ss_dssp EEEEEEEEETTTEECCEEEEEEE
T ss_pred EEEEEEEEECCeEEEccEEEEEe
Confidence 99998775522233334445544
No 60
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=79.48 E-value=4.6 Score=40.49 Aligned_cols=80 Identities=18% Similarity=0.106 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC---CcCccccccccCCccccCCCCCCCcCCCCccccCC
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD---YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 432 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~---~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~G 432 (533)
|++...+.+++..+.+.++| |++-.+|...+...+.+.|.. |..-.+-|.-..+ .|-.| ++.+|++|
T Consensus 140 r~A~~i~~~~~~~~~~~i~~-G~te~e~~~~~~~~~~~~g~~~~~f~~iv~~g~n~~~-~H~~~--------~~~~l~~g 209 (356)
T 3q6d_A 140 KEAAQIADAAFEHILSFIRP-GVSEIEVSNELEFFMRKQGATSSSFDIIVASGLRSAL-PHGVA--------SEKVIETG 209 (356)
T ss_dssp HHHHHHHHHHHHHHTTTCCT-TCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGGGGC-TTCBC--------CSCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHCCCCcCCCCCEEEEcCcccc-CCCCC--------CCcccCCC
Confidence 44555566777888889999 999999999999999998874 2222222221111 12222 45689999
Q ss_pred CEEecCcceeecC
Q 009507 433 MIVSNEPGYYEDH 445 (533)
Q Consensus 433 Mv~siEPg~y~~g 445 (533)
.++.+.-|....|
T Consensus 210 d~v~iD~g~~~~g 222 (356)
T 3q6d_A 210 DFVTLDFGAYYKG 222 (356)
T ss_dssp CEEEEEECEEETT
T ss_pred CEEEEEEeEEECC
Confidence 9999998765544
No 61
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=78.68 E-value=5.7 Score=39.89 Aligned_cols=80 Identities=13% Similarity=0.074 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC---CcCccccccccCCccccCCCCCCCcCCCCccccCC
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD---YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 432 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~---~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~G 432 (533)
|++...+-+++..+.+.++| |++-.+|...+...+.+.|.. |+.-.+-|.-. ..|+.. + ++.+|++|
T Consensus 137 r~A~~i~~~a~~~~~~~i~~-G~te~el~~~~~~~~~~~g~~~~~f~~iv~~g~n~-----~~~H~~---~-~~~~l~~g 206 (351)
T 1wy2_A 137 EKACEIADKAVMAAIEEITE-GKKEREVAAKVEYLMKMNGAEKPAFDTIIASGYRS-----ALPHGV---A-SDKRIERG 206 (351)
T ss_dssp HHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGGG-----GSTTCB---C-CSCBCCTT
T ss_pred HHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCCCCCCCCEEEEcccc-----ccccCC---C-CCcccCCC
Confidence 55566667788888999999 999999999999999988864 22222222111 122211 1 45679999
Q ss_pred CEEecCcceeecC
Q 009507 433 MIVSNEPGYYEDH 445 (533)
Q Consensus 433 Mv~siEPg~y~~g 445 (533)
.++.+.-|....|
T Consensus 207 d~v~iD~G~~~~g 219 (351)
T 1wy2_A 207 DLVVIDLGALYQH 219 (351)
T ss_dssp CEEEEEECEEETT
T ss_pred CEEEEEEEEEECC
Confidence 9999998875544
No 62
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=77.90 E-value=6.1 Score=39.54 Aligned_cols=80 Identities=13% Similarity=0.106 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC---CcCccccccccCCccccCCCCCCCcCCCCccccCC
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD---YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 432 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~---~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~G 432 (533)
|++...+-+++..+.+.++| |++-.+|...+...+.+.|.. |+.-.+-|.- ...|+.. + ++.+|++|
T Consensus 143 r~a~~~~~~~~~~~~~~~~~-G~te~e~~~~~~~~~~~~g~~~~~f~~iv~~g~~-----~~~~h~~---~-~~~~l~~g 212 (359)
T 2zsg_A 143 KQAIEISERAFLETVQQIRA-GMTEKEIAALLEYTMRKEGAEGVAFDTIVASGCR-----SALPHGK---A-SDKVVERG 212 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCCT-TCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGG-----GGSTTCC---C-CSCBCCTT
T ss_pred HHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHcCCCCCCCCCEEEEccc-----cccccCC---C-CCcccCCC
Confidence 45556667778888899999 999999999999999998873 2221111111 0122211 1 45679999
Q ss_pred CEEecCcceeecC
Q 009507 433 MIVSNEPGYYEDH 445 (533)
Q Consensus 433 Mv~siEPg~y~~g 445 (533)
.++.+.-|....|
T Consensus 213 d~v~iD~g~~~~g 225 (359)
T 2zsg_A 213 DVIVIDFGATYEN 225 (359)
T ss_dssp CEEEEEECEEETT
T ss_pred CEEEEEEeEEECC
Confidence 9999998876544
No 63
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=74.94 E-value=6.4 Score=42.38 Aligned_cols=101 Identities=12% Similarity=0.010 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHcc---------CCCCCCcchHHHHHHHHHHHcCC------CCcCccccccccCCcccc-----
Q 009507 355 EKECFTRVLQGHIALDQAI---------FPQSTPGFVLDAFARSSLWKIGL------DYRHGTGHGVGAALNVHE----- 414 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~---------~P~G~~~~~ld~~ar~~l~~~G~------~~~h~~GHGvG~~l~vhE----- 414 (533)
.|.+-+.+.++...++..+ +| |++..+|.....+.+.+.+- ....|.+|-++ +++.+
T Consensus 49 Yr~AgeIa~~vLk~v~~li~~G~~~~~~kp-ga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFPT~--ISvN~~vaHy 125 (614)
T 4b6a_t 49 YRTAGQIAQTALKYVTSLINDSYHSKTTQR-QLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIPTT--IDIDQISGGW 125 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHTTC-CCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEEEE--EEETTEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccCC-CCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccCce--ecHHHcccCC
Confidence 3445555555555555544 56 78888888777776665321 12335555555 44433
Q ss_pred CCCCCCC---------------cCCCCccccCCCEEecCcceeecCcceEEEEEeEEEeec
Q 009507 415 GPQSISF---------------RYGNMTPLVEGMIVSNEPGYYEDHAFGIRIENLLYVKEV 460 (533)
Q Consensus 415 ~P~~i~~---------------~~~~~~~L~~GMv~siEPg~y~~g~~GiriEd~v~Vt~~ 460 (533)
-|. .+- ....+.+|++|.|+-|.-|.+++| |..-.-.|++|.+.
T Consensus 126 sP~-~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDG-yiadvA~Tvvvg~~ 184 (614)
T 4b6a_t 126 CPE-IDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDG-YTSEVSHTMVIYPV 184 (614)
T ss_dssp CCC-TTS------------------CCCBCCTTCEEEEEEEEEETT-EEEEEEEEEECCCC
T ss_pred CCC-CcchhhcccccccccccccccccccccCCCEEEEEeeEEECC-eEEEEEEEEEECCc
Confidence 342 110 001346899999999999999987 56778899998764
No 64
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=73.08 E-value=9.3 Score=39.62 Aligned_cols=81 Identities=14% Similarity=0.066 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC---CcCccccccccCCccccCCCCCCCcCCCCccccC
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD---YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVE 431 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~---~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~ 431 (533)
.|++...+-+++..+.+.++| |++-.+|...+...+.+.|.. |..-.+-|.-. ..|+.. + ++.+|++
T Consensus 184 ~r~A~~i~~~a~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~f~~iv~~G~n~-----~~~H~~---~-~~~~l~~ 253 (440)
T 2v3z_A 184 LRRAGEITAMAHTRAMEKCRP-GMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENG-----CILHYT---E-NECEMRD 253 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCCEESSCCEEEEGGGG-----GSTTCC---C-CCSBCCT
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCCcCCCCCeEEEcCcc-----ccccCC---C-CCccccC
Confidence 355666777788889999999 999999999998888888864 22222222111 112211 1 4578999
Q ss_pred CCEEecCcceeecC
Q 009507 432 GMIVSNEPGYYEDH 445 (533)
Q Consensus 432 GMv~siEPg~y~~g 445 (533)
|.++.+.-|....|
T Consensus 254 gd~vliD~G~~~~g 267 (440)
T 2v3z_A 254 GDLVLIDAGCEYKG 267 (440)
T ss_dssp TCEEEEEECEEETT
T ss_pred CCEEEEEeeEEECC
Confidence 99999998775543
No 65
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=72.80 E-value=3.5 Score=34.67 Aligned_cols=36 Identities=11% Similarity=-0.025 Sum_probs=30.5
Q ss_pred CeEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhh
Q 009507 10 LALIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 50 (533)
Q Consensus 10 ~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~i 50 (533)
.+||||+. +|...+++|++.+ .+++++.. .++|+.+
T Consensus 92 ~~ig~e~~-~~~~~~~~L~~~~--~~~~~v~~--~~~v~~l 127 (131)
T 3il0_A 92 ETIGFDNQ-VSFAYYQALQAIF--EGYTLSPQ--TNFMEEL 127 (131)
T ss_dssp CEEEEETT-SCHHHHHHHHHHT--TTSEEEEE--SSHHHHH
T ss_pred CEEEEcCC-CCHHHHHHHHhhc--CCCEEEEC--chHHHHh
Confidence 68999999 9999999999887 35788885 6888865
No 66
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=70.49 E-value=8.6 Score=39.81 Aligned_cols=80 Identities=18% Similarity=0.108 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC---CcCccccccccCCccccCCCCCCCcCCCCccccCC
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD---YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEG 432 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~---~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~G 432 (533)
|++...+-+++..+++.++| |++-.+|.......+.+.|.. |..-++-|.-. .-|+.+ + ++.+|++|
T Consensus 181 r~A~~i~~~a~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~f~~ivasG~n~-----~~~H~~---~-~~~~l~~G 250 (427)
T 3ig4_A 181 KEAIAVTKDGIYNVLKHAKA-DMMEYELEAQFDFTLKSSGIKHHAFNTILASGKNA-----TVLHYE---D-NDAQIQNG 250 (427)
T ss_dssp HHHHHHHHHHHHHHHHHCCS-SEEHHHHHHHHHHHHHHTTCCEESSCCEEEEGGGG-----GSTTCC---C-CCSEECTT
T ss_pred HHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCCCCCCCEEEECccc-----cccccC---c-ccccCCCC
Confidence 55666677788889999999 999999999999999988863 32222222111 112211 1 45789999
Q ss_pred CEEecCcceeecC
Q 009507 433 MIVSNEPGYYEDH 445 (533)
Q Consensus 433 Mv~siEPg~y~~g 445 (533)
.++.+.-|....|
T Consensus 251 dlvliD~G~~~~g 263 (427)
T 3ig4_A 251 DLVLLDLGAQKDY 263 (427)
T ss_dssp CEEEEEECEEETT
T ss_pred CEEEEEeeeEECc
Confidence 9999988775544
No 67
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=67.22 E-value=12 Score=37.49 Aligned_cols=80 Identities=9% Similarity=-0.074 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCC--CCcCccccccccCCccccCCCCCCCcCCCCccccCCC
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGL--DYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVEGM 433 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~--~~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~GM 433 (533)
|++...+.+++..+.+.++| |++-.+|...+...+.+.+. .|..-.+-|.-. ..|+.. + ++.+|++|.
T Consensus 141 r~A~~i~~~a~~~~~~~i~~-G~te~el~~~~~~~~~~~~~~~~f~~iv~~g~n~-----~~~H~~---~-~~~~l~~gd 210 (356)
T 1wn1_A 141 EHASRIADKVFEEILTWDLI-GMKERELALKIELLIRELSDGIAFEPIVASGENA-----ANPHHE---P-GERKIRKGD 210 (356)
T ss_dssp HHHHHHHHHHHHHHTTSCCT-TCBHHHHHHHHHHHHHHHSSEESSCCEEEEGGGG-----GCTTCC---C-CSCBCCTTC
T ss_pred HHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhCcCCCCCcEEEEeccc-----ccccCC---C-CCCeecCCC
Confidence 55666667788888899999 99999999999888887622 122222222211 122211 1 456899999
Q ss_pred EEecCcceeecC
Q 009507 434 IVSNEPGYYEDH 445 (533)
Q Consensus 434 v~siEPg~y~~g 445 (533)
++.+.-|....|
T Consensus 211 ~v~iD~g~~~~g 222 (356)
T 1wn1_A 211 IIILDYGARWKG 222 (356)
T ss_dssp EEEEEECEEETT
T ss_pred EEEEEEEEEECC
Confidence 999998875544
No 68
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=65.65 E-value=19 Score=37.93 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHc-CCC---CcCccccccccCCccccCCCCCCCcCCCCcccc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI-GLD---YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLV 430 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~-G~~---~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~ 430 (533)
.|++...+.+++.++++.++| |++-.+|.......+.+. |.. |..-++-|.-.. ..|-.+..+ + ++.+|+
T Consensus 196 mr~A~~i~~~a~~~~~~~i~~-G~tE~el~~~~~~~~~~~~G~~~~~~~~iv~sG~n~~-~~Hy~~~g~---p-~~~~l~ 269 (494)
T 2iw2_A 196 LRYTNKISSEAHREVMKAVKV-GMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSA-VLHYGHAGA---P-NDRTIQ 269 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHCCCEESSCCEEEEGGGGG-CSSCSSTTS---C-SCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhCCCCcCCCCceEEEcCccc-cccccccCC---C-CCCccC
Confidence 356667777888999999999 999999999988877665 763 322222222110 123211111 1 356799
Q ss_pred CCCEEecCcceeecC
Q 009507 431 EGMIVSNEPGYYEDH 445 (533)
Q Consensus 431 ~GMv~siEPg~y~~g 445 (533)
+|.++.+.-|....|
T Consensus 270 ~Gd~vliD~G~~~~g 284 (494)
T 2iw2_A 270 NGDMCLFDMGGEYYC 284 (494)
T ss_dssp TTCEEEEEECEEBTT
T ss_pred CCCEEEEEeeEEECC
Confidence 999999998875544
No 69
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=59.31 E-value=7.6 Score=32.77 Aligned_cols=38 Identities=11% Similarity=-0.094 Sum_probs=30.5
Q ss_pred CCeEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhh
Q 009507 9 ELALIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 50 (533)
Q Consensus 9 ~~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~i 50 (533)
+.+||||+..+|...++.|++.+. +.+++.. .++|+.+
T Consensus 97 ~~~vg~e~~~~~~~~~~~l~~~~~--~~~~v~~--~~~i~~l 134 (138)
T 3pn9_A 97 FKRVAVEFDNLILTKYHGLKTVFE--TAEFDNL--TPRIQRM 134 (138)
T ss_dssp CCEEEECTTTCCHHHHHHHHHHST--TCEEEEC--HHHHHHH
T ss_pred CCeEEEecCcCCHHHHHHHHHHCC--CCeeeeh--HHHHHHH
Confidence 578999999999999999988764 4677774 5777654
No 70
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=56.83 E-value=13 Score=37.67 Aligned_cols=83 Identities=11% Similarity=-0.015 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-CcCcc--cc--ccccCCccc-cCCCCCCCcCCCCccc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRHGT--GH--GVGAALNVH-EGPQSISFRYGNMTPL 429 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~~h~~--GH--GvG~~l~vh-E~P~~i~~~~~~~~~L 429 (533)
|++...+.+++..+.+.++| |++-.+|...+.+.+.+.|.. +..+. +. .++ -+.+ ..|+.+ + ++.+|
T Consensus 167 r~A~~i~~~a~~~~~~~i~~-G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~iv~--~g~n~~~~H~~---~-~~~~l 239 (402)
T 1kp0_A 167 RZGARISDIGGAATAAAISA-GVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWFQ--SGINTDGAHNP---V-TBRVV 239 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEEE--EGGGGGSTTCC---E-ECCBC
T ss_pred HHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHhcccccCcccccCccceee--cccccccccCC---C-CCccc
Confidence 45566666778888999999 999999999888888776531 21110 00 111 1111 122211 1 35679
Q ss_pred cCCCEEecCcceeecC
Q 009507 430 VEGMIVSNEPGYYEDH 445 (533)
Q Consensus 430 ~~GMv~siEPg~y~~g 445 (533)
++|.++.+.-|....|
T Consensus 240 ~~gd~v~iD~g~~~~g 255 (402)
T 1kp0_A 240 ZRGDILSLNCFPMIFG 255 (402)
T ss_dssp CTTCEEEEEEEEEETT
T ss_pred CCCCEEEEEEEeeECC
Confidence 9999999998776544
No 71
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=56.48 E-value=24 Score=35.49 Aligned_cols=80 Identities=15% Similarity=0.063 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHc-CCC---CcCccccccccCCccccCCCCCCCcCCCCccccC
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKI-GLD---YRHGTGHGVGAALNVHEGPQSISFRYGNMTPLVE 431 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~-G~~---~~h~~GHGvG~~l~vhE~P~~i~~~~~~~~~L~~ 431 (533)
|++...+-+++.++++.++| |++-.+|...+...+.+. |.. |..-.+-|.-. -..|-.| ++.+|++
T Consensus 160 r~A~~i~~~a~~~~~~~~~~-G~tE~el~~~~~~~~~~~~g~~~~~f~~iv~~G~n~-~~~H~~~--------~~~~l~~ 229 (377)
T 4fkc_A 160 KKAAEIVDKVFYRFIEGKLE-GKSERELANRIEYMIKNEFGADDVSFEPIVASGPNG-ANPHHRP--------SHRKIRK 229 (377)
T ss_dssp HHHHHHHHHHHHHHTTSCCT-TCBHHHHHHHHHHHHHTSTTCCEESSCCEEEEGGGG-GCTTCCC--------CSCBCCT
T ss_pred HHHHHHHHHHHHhhhhccCC-CccHHHHHHHHhhhhhhccCCCCcccCccccccccc-ccccccc--------ccccccc
Confidence 55667777788888999999 999999988887777654 543 22222222111 0112211 5678999
Q ss_pred CCEEecCcceeecC
Q 009507 432 GMIVSNEPGYYEDH 445 (533)
Q Consensus 432 GMv~siEPg~y~~g 445 (533)
|.++.+.-|....|
T Consensus 230 gd~v~iD~g~~~~g 243 (377)
T 4fkc_A 230 GDVVIFDYGAKYLG 243 (377)
T ss_dssp TCEEEEEECEEETT
T ss_pred cccccccccccccC
Confidence 99999998765544
No 72
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=51.48 E-value=28 Score=36.40 Aligned_cols=91 Identities=8% Similarity=-0.079 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCC-----CcchHHHHHHHHHHHcCCCCcC--ccccccccCCccccCCCCCCCcCCCCcc
Q 009507 356 KECFTRVLQGHIALDQAIFPQST-----PGFVLDAFARSSLWKIGLDYRH--GTGHGVGAALNVHEGPQSISFRYGNMTP 428 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~-----~~~~ld~~ar~~l~~~G~~~~h--~~GHGvG~~l~vhE~P~~i~~~~~~~~~ 428 (533)
|++...+-+++..+.+.++| |+ +-.+|...+...+.+.|..+.. -.+-|.-..+ .|-.| ++.+
T Consensus 239 r~A~~i~~~a~~~~~~~i~p-G~~~~~~tE~el~~~l~~~~~~~G~~~~~~~ivasG~n~~~-~H~~~--------~~~~ 308 (470)
T 4b28_A 239 RCASHACEVAVRKMEDFARS-KVGDGVTCENDIWAILHSENVRRGGEWIETRLLASGPRSNP-WFQEC--------GPRV 308 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HTTSSCCBHHHHHHHHHHHHHTTTCCEESCCCEEEGGGGSS-TTCCC--------CSCB
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCCCCCCCHHHHHHHHHHHHHHcCCCcCCCceeEEcCcccc-CCCCC--------CCcc
Confidence 55666667788888899999 99 9999999999988888865321 1122211100 12111 4578
Q ss_pred ccCCCEEecCccee-ecCcceEEEEEeEEE
Q 009507 429 LVEGMIVSNEPGYY-EDHAFGIRIENLLYV 457 (533)
Q Consensus 429 L~~GMv~siEPg~y-~~g~~GiriEd~v~V 457 (533)
|++|.++.+.-|.. ..| |-.-+..|+.|
T Consensus 309 l~~Gd~vliD~G~~g~~G-Y~sDitRT~~v 337 (470)
T 4b28_A 309 CQRNEIISFDTDLVGAYG-ICTDISRSWWI 337 (470)
T ss_dssp CCSSEEEEEECCEECGGG-CEECCEEEEEE
T ss_pred ccCCCEEEEEecccccCe-EEEeeEEEEEE
Confidence 99999999997653 222 33344555555
No 73
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=45.34 E-value=25 Score=35.74 Aligned_cols=82 Identities=16% Similarity=0.119 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC-CcC----ccc--cccccCCccccCCCCCCCcCCCCcc
Q 009507 356 KECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD-YRH----GTG--HGVGAALNVHEGPQSISFRYGNMTP 428 (533)
Q Consensus 356 ~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~-~~h----~~G--HGvG~~l~vhE~P~~i~~~~~~~~~ 428 (533)
|++...+..++.++.+.++| |++-.+|...+.+.+.+.|.. +.. ++- =..| .+ ...|+.. + ++.+
T Consensus 167 r~A~~i~~~~~~~~~~~i~~-G~tE~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~n-~~~~H~~---~-~~~~ 238 (401)
T 1chm_A 167 RHGARIADIGGAAVVEALGD-QVPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQSG--IN-TDGAHNP---V-TTRK 238 (401)
T ss_dssp HHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHHCSSCCBCCCEEEEEEG--GG-GGSTTCC---E-ESCB
T ss_pred HHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhccccCCCccccCcceeeeec--cc-ccccccC---C-CCCc
Confidence 34444455667778888999 999999998877766665321 111 100 0112 11 1112211 1 4568
Q ss_pred ccCCCEEecCcceeecC
Q 009507 429 LVEGMIVSNEPGYYEDH 445 (533)
Q Consensus 429 L~~GMv~siEPg~y~~g 445 (533)
|++|.++.+.-|....|
T Consensus 239 l~~gd~v~iD~G~~~~g 255 (401)
T 1chm_A 239 VNKGDILSLNCFPMIAG 255 (401)
T ss_dssp CCTTCEEEEEEECEETT
T ss_pred cCCCCEEEEEEEEeeCC
Confidence 99999999998766554
No 74
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=38.15 E-value=25 Score=29.29 Aligned_cols=36 Identities=6% Similarity=0.007 Sum_probs=29.1
Q ss_pred CeEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhh
Q 009507 10 LALIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 50 (533)
Q Consensus 10 ~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~i 50 (533)
.+||||+..+|...++.|++.+. .+++.. .++|+.+
T Consensus 96 ~~ig~e~~~~~~~~~~~L~~~~~---~~~~~~--~~~v~~l 131 (132)
T 3ooo_A 96 SKVLAEFDNLNVTKFQGLQTVFD---GHFENL--TPYIQNM 131 (132)
T ss_dssp SEEEECTTTCCHHHHHHHHHHCC---SEEEEC--CHHHHTT
T ss_pred CeEEEecCCcCHHHHHHHHHhCC---cceech--HHHHHhc
Confidence 58999999999999999998763 678874 5677654
No 75
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=36.86 E-value=69 Score=33.19 Aligned_cols=91 Identities=18% Similarity=0.135 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCC---CcCccccccccCCcccc-CCCCCCCcCCCCcccc
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLD---YRHGTGHGVGAALNVHE-GPQSISFRYGNMTPLV 430 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~---~~h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~L~ 430 (533)
.|++-..+.+++.++++.++| |++-.+|.......+ +.|.. |..- |+ .+.+. -|..+ +.+...++
T Consensus 168 mr~A~~ia~~a~~~~~~~i~p-G~tE~el~~~~~~~~-~~g~~~~~f~~I----Va--sG~naa~~H~~---~~~~~~l~ 236 (451)
T 3rva_A 168 MREANKLAVAGHKAAEQAFRE-GKSEFDINLAYAAAS-RQGDNDVPYTSI----VA--LNEHASILHYM---QCDTVAPK 236 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHH-TCCTTTSSSCCE----EE--EGGGGGCTTCC---CCCSSCCS
T ss_pred HHHHHHHHHHHHHHHHHhhhc-CCCHHHHHHHHHHHH-HcCCCcCCcCcE----EE--ECCcccccCCC---CCCCcccC
Confidence 456677778888899999999 999888876543332 22321 2211 11 11111 12211 11333578
Q ss_pred CCCEEecCcceeecCcceEEEEEeEEE
Q 009507 431 EGMIVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 431 ~GMv~siEPg~y~~g~~GiriEd~v~V 457 (533)
+|.++.+.-|....| |-.=+..|+.|
T Consensus 237 ~GdlVliD~G~~~~G-Y~sDiTRT~~v 262 (451)
T 3rva_A 237 ESRSFLIDAGANYHG-YAADITRTYAQ 262 (451)
T ss_dssp SCCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCEEEEEeeEEECC-EEEEeEEEEEe
Confidence 999999998876554 33444555554
No 76
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=34.61 E-value=23 Score=29.85 Aligned_cols=39 Identities=5% Similarity=0.014 Sum_probs=30.1
Q ss_pred CCCeEEEcCCCCCHHHHHHHHHHHHhCCCEEE-eCCCCChhhhh
Q 009507 8 AELALIPVQFLFSSDAAEELKEAIAKKNHELV-YLYDLNLVDVI 50 (533)
Q Consensus 8 ~~~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~-~~~~~nlvd~i 50 (533)
...+||||+..+|...++.|++.|. +.+++ .+ .++|+.+
T Consensus 98 ~~~~ig~e~~~~~~~~~~~L~~~l~--~~~~v~~~--~~~i~~l 137 (140)
T 3i7m_A 98 NPEHVAIEKGQLQVARMEALAAQFS--APSFDLDI--TSFIEHM 137 (140)
T ss_dssp CCSEEEECTTTSCHHHHHHHHTTSS--SCEEEEEC--HHHHHHC
T ss_pred CCCeEEEccCCCCHHHHHHHHHHCC--CCEEecCH--HHHHHHH
Confidence 3478999999999999999987763 46777 74 5666654
No 77
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=32.37 E-value=19 Score=22.40 Aligned_cols=25 Identities=16% Similarity=0.167 Sum_probs=18.5
Q ss_pred eeecCcCCCCCHHHHHHHHHHHHHH
Q 009507 342 ITRTVHFGEPTAREKECFTRVLQGH 366 (533)
Q Consensus 342 itRT~~~G~p~~e~~~~y~~vl~~~ 366 (533)
--||+.+|-.+++.+++-+-+.++.
T Consensus 4 qvrtiwvggtpeelkklkeeakkan 28 (36)
T 2ki0_A 4 QVRTIWVGGTPEELKKLKEEAKKAN 28 (36)
T ss_dssp SCCCCCBCCCHHHHHHHHHHHHHHC
T ss_pred eeEEEEecCCHHHHHHHHHHHHhcc
Confidence 3589999877777887777666654
No 78
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=30.22 E-value=2.4e+02 Score=28.55 Aligned_cols=96 Identities=11% Similarity=0.061 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHhhC-CCCCCCCC--eEEEecCCcccccccC---CCCC
Q 009507 244 MLNSHLRDAAALAQFWVWLEEEIHNGAKLTEVDVADKLLEFRSKQS-GFLDTSFD--TISGSGANGAIIHYKP---EPGK 317 (533)
Q Consensus 244 ~r~A~~~~~~a~~~~~~~l~~~i~~~~g~tE~eia~~l~~~r~~~~-g~~~~sf~--~i~~~G~n~a~~hy~p---~~~~ 317 (533)
.|++....-.|+..+++.+ +||++-.++.....+...+.. |+. ..|. +--+.|-+ .|=.| +..+
T Consensus 308 ~~~~y~~v~~a~~~~~~~~------~pG~~~~~v~~~~~~~~~~~~~g~~-~~~~h~~GHgiGl~---~he~p~~~~~~~ 377 (444)
T 3cb6_A 308 QQKNYSFLVALQKKLFEYC------RDGAVIGDIYTKILGLIRAKRPDLE-PNFVRNLGAGIGIE---FRESSLLVNAKN 377 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHC------STTCBHHHHHHHHHHHHHHHCGGGG-GGBCSCCEEECSSS---SCBGGGCCSTTC
T ss_pred HHHHHHHHHHHHHHHHHHc------CCCCcHHHHHHHHHHHHHhhhhhhH-hhcccccccccCcc---ccCCccccCCCC
Confidence 3445444455555555544 899999999999987654432 332 1122 22233322 24222 2235
Q ss_pred CcccCCCCeEEEEecee--e---------cCcccceeecCcCC
Q 009507 318 CSVVDSKKLFLLDSGAQ--Y---------VDGTTDITRTVHFG 349 (533)
Q Consensus 318 ~~~i~~gd~vliD~G~~--y---------~gy~tDitRT~~~G 349 (533)
+.+|++|.++.+.-|.. + .++..=+.-|+.|.
T Consensus 378 ~~~l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt 420 (444)
T 3cb6_A 378 PRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQIT 420 (444)
T ss_dssp CCBCCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECC
T ss_pred CcccCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEEC
Confidence 68999999999998874 1 13445566667664
No 79
>2e9x_A DNA replication complex GINS protein PSF1; eukaryotic DNA replication; HET: DNA; 2.30A {Homo sapiens} SCOP: a.278.1.1 PDB: 2eho_B*
Probab=29.30 E-value=34 Score=29.77 Aligned_cols=24 Identities=25% Similarity=0.526 Sum_probs=19.0
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHC
Q 009507 489 LSLLSAAEIDWLNNYHSQVWEKVS 512 (533)
Q Consensus 489 ~~ll~~~e~~wln~yh~~v~~~~~ 512 (533)
.+.||+.|++|+++|.+.+-+-.+
T Consensus 103 ~~~LS~~E~~f~~~Y~~lL~~y~~ 126 (149)
T 2e9x_A 103 RFHMAAEEMEWFNNYKRSLATYMR 126 (149)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999887665443
No 80
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=29.15 E-value=25 Score=29.36 Aligned_cols=36 Identities=8% Similarity=0.018 Sum_probs=27.8
Q ss_pred CeEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhh
Q 009507 10 LALIPVQFLFSSDAAEELKEAIAKKNHELVYLYDLNLVDVI 50 (533)
Q Consensus 10 ~~vg~D~~~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~i 50 (533)
.+||||+..+|...++.|++.+. .+++.. .++|+.+
T Consensus 96 ~~ig~e~~~~~~~~~~~L~~~~~---~~~~~~--~~~v~~l 131 (132)
T 3o5v_A 96 KTIYAEFDHLNVNKFHGLQTIFS---GQFNNL--TPYVQGM 131 (132)
T ss_dssp SEEEECTTTCCHHHHHHHHTTCC---SEEEEC--HHHHHTC
T ss_pred CeEEEecCCCCHHHHHHHHHhCC---Cceecc--HHHHHHh
Confidence 58999999999999999987663 567764 4566543
No 81
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=28.61 E-value=90 Score=32.98 Aligned_cols=94 Identities=15% Similarity=0.046 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCcchHHHHHHHHHHHcCCCCcCccccccccCCcccc-CCCCCCCcCCCCccccCCC
Q 009507 355 EKECFTRVLQGHIALDQAIFPQSTPGFVLDAFARSSLWKIGLDYRHGTGHGVGAALNVHE-GPQSISFRYGNMTPLVEGM 433 (533)
Q Consensus 355 ~~~~y~~vl~~~~~~~~~~~P~G~~~~~ld~~ar~~l~~~G~~~~h~~GHGvG~~l~vhE-~P~~i~~~~~~~~~L~~GM 433 (533)
.|++-..+.+++.++.+.++| |++-.+|.......+ +.|... .....-|+ .+.+. -|+.+ +++...+++|.
T Consensus 168 mR~A~~ia~~a~~~~~~~ikp-G~tE~el~~~~~~~~-~~g~~~-~sf~~IVa--sG~naa~~H~~---p~~~~~l~~GD 239 (517)
T 3l24_A 168 MREANKIAVQGHKAARDAFFQ-GKSEFEIQQAYLLAT-QHSEND-NPYGNIVA--LNENCAILHYT---HFDRVAPATHR 239 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHH-TCCGGG-SSSCCEEE--EGGGGGCTTCC---CCCSSCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHH-HcCCCc-CCcCCEEE--EccccccccCC---CCCCccccCCC
Confidence 466677777888899999999 999888876543322 222110 00111111 11111 12211 11333579999
Q ss_pred EEecCcceeecCcceEEEEEeEEE
Q 009507 434 IVSNEPGYYEDHAFGIRIENLLYV 457 (533)
Q Consensus 434 v~siEPg~y~~g~~GiriEd~v~V 457 (533)
++.+.-|....| |-.=+..|+.|
T Consensus 240 lVliD~G~~~~G-Y~sDiTRT~~v 262 (517)
T 3l24_A 240 SFLIDAGANFNG-YAADITRTYDF 262 (517)
T ss_dssp EEEEEEEEEETT-EEEEEEEEEES
T ss_pred EEEEeecEEECC-EEEEeEEEEEc
Confidence 999998876554 33334455544
No 82
>2k4j_A Putative transcriptional regulator; response regulator, acid resistance, DN binding, phosphoprotein, transcription regul; NMR {Helicobacter pylori}
Probab=25.24 E-value=37 Score=27.87 Aligned_cols=64 Identities=14% Similarity=0.066 Sum_probs=41.2
Q ss_pred eEEEcCC--CCCHHHHHHHHHHHHhCCCEEEeCCCCChhhhhcccCCCCCCCCccccccccccCcCHHHHHHHHHHHHHH
Q 009507 11 ALIPVQF--LFSSDAAEELKEAIAKKNHELVYLYDLNLVDVIWKESRPKPPNKPIRVHALKYAGLDVASKLSSLRSDLVD 88 (533)
Q Consensus 11 ~vg~D~~--~~s~~~~~~~~~~l~~~~~~l~~~~~~nlvd~iW~~~rP~~p~~~i~~~~~~~~g~~~~~Ki~~lr~~m~~ 88 (533)
+|-.|+. -+|..+++-|.--+...| +.++ .+.|++.+|+ +.+.. +..+...-|.+||+.|.+
T Consensus 32 ~l~~~g~~i~Lt~~E~~LL~~L~~~~g-~vvs--re~L~~~vW~-~~~~~------------~~~tl~~~I~rLRkkL~~ 95 (115)
T 2k4j_A 32 EVYMHEKKLDLTRAEYEILSLLISKKG-YVFS--RESIAIESES-INPES------------SNKSIDVIIGRLRSKIEK 95 (115)
T ss_dssp EEEETTEEECSCHHHHHHHHHHHHHCC-CEEC--HHHHHHHTCC-SSCTT------------CHHHHHHHHHHHHHHHHH
T ss_pred EEEECCEEEecCHHHHHHHHHHHHcCC-cEEc--HHHHHHHHcC-CCCCC------------chhHHHHHHHHHHHHhhc
Confidence 4444543 246777776665555554 4665 4789999995 43211 124577889999999987
Q ss_pred cC
Q 009507 89 AG 90 (533)
Q Consensus 89 ~g 90 (533)
.+
T Consensus 96 ~~ 97 (115)
T 2k4j_A 96 NP 97 (115)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 83
>2b3g_B Cellular tumor antigen P53; OB-fold, ssDNA mimicry, replication; 1.60A {Homo sapiens}
Probab=24.27 E-value=48 Score=19.64 Aligned_cols=18 Identities=28% Similarity=0.654 Sum_probs=14.0
Q ss_pred CCccchhcCCHHHH-HHHH
Q 009507 484 TKLVDLSLLSAAEI-DWLN 501 (533)
Q Consensus 484 ~~li~~~ll~~~e~-~wln 501 (533)
...+|-=|||+++| +|+.
T Consensus 5 sqa~ddlmlspddi~qw~s 23 (28)
T 2b3g_B 5 SQAMDDLMLSPDDIEQWFT 23 (28)
T ss_dssp GGTTGGGGCCHHHHHHHHH
T ss_pred hhHHHhhhcChHHHHHHhh
Confidence 56678889999998 5764
No 84
>4ard_A Capsid protein P27; viral protein, retrovirus, GAG; 7.00A {Mason-pfizer monkey virus}
Probab=21.91 E-value=25 Score=29.35 Aligned_cols=37 Identities=16% Similarity=0.288 Sum_probs=29.9
Q ss_pred ccceecccCCCCCCccchhcCCH-HHHHHHHHHHHHHHHH
Q 009507 472 LGFEKLTFVPIQTKLVDLSLLSA-AEIDWLNNYHSQVWEK 510 (533)
Q Consensus 472 lg~e~LT~~P~~~~li~~~ll~~-~e~~wln~yh~~v~~~ 510 (533)
|+++.|| |.|-+-|....|++ ..+.|+-.|+..|+..
T Consensus 30 la~~~Lt--P~DWkslar~~L~pgq~llW~se~~e~cr~q 67 (116)
T 4ard_A 30 VADNWLT--PTDWNTLVRAVLSGGDHLLWKSEFFENCRDT 67 (116)
T ss_pred HHHhccC--hHhHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 3566655 88999999999997 4579999999988764
Done!