BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009508
(533 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/469 (19%), Positives = 193/469 (41%), Gaps = 48/469 (10%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-----------DISMQGFWYPF 97
++V+ G+G AGL A +L+ GF VL+ + G + + F+ +
Sbjct: 2 RVVIAGAGLAGLACAKYLADAGFTPVVLERRDVLGGKIAAWKDEDGDWYETGLHIFFGAY 61
Query: 98 RNIFSLVDELGIKPFTGWMKSA----QYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSR 153
N+ L EL I+ W + + Q + G F D +P P+ L +
Sbjct: 62 PNMLQLFKELDIEDRLQWKEHSMIFNQPEKPGTYSRF----DFPDIPAPINGLVAILRNN 117
Query: 154 LPLVDRLT-------SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIG 206
D LT L L+ A++ + KY T E + R+ + V
Sbjct: 118 ----DMLTWPEKIRFGLGLLPAIVQGQSYVEEMDKY---TWSEWMAKQNIPPRIEKEVFI 170
Query: 207 PLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGC 266
+ + F ++ SA L L L + + + G E++ +P +D + RG
Sbjct: 171 AMSKALNFIDPDEISATILLTALNR-FLQEKNGSKMAFLDGAPPERLCQPLVDYITERGG 229
Query: 267 EFLDGRRVTDFIYDEERCCISDVVCG-----KETYSAGAVVLAVGISTLQELIKNSILCN 321
E + + + + +E+ ++ G E +A V A+ + L+ ++ +
Sbjct: 230 EVHINKPLKEILLNEDGSVKGYLIRGLDGAPDEVITADLYVSAMPVDPLKTMVP-APWRE 288
Query: 322 REEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDS 381
EF ++ L + V+++ LWFD+K+T ++ + L+ + D++ E+ D
Sbjct: 289 YPEFKQIQGLEGVPVINLHLWFDRKLT--DIDHLLFSRSPLLS-VYADMSNTCREYSDPD 345
Query: 382 ATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDF----STATVMDHKIRRFPKSLTH 437
++++ A + + D+++VA ++ + + + A ++ + + P+S+
Sbjct: 346 KSMLELVLAPAQDWIGKSDEEIVAATMAEIKQLFPQHFNGDNPARLLKSHVVKTPRSVYK 405
Query: 438 FFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRV 486
PG TS PN ++AGD+ ++ S E + ++G + A +
Sbjct: 406 ATPGRQACRPDQRTSVPNFYLAGDFTMQKYLG-SMEGAVLSGKQCAQAI 453
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 188/466 (40%), Gaps = 37/466 (7%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-----------DISMQGFWYPF 97
K+V+ G+G AGL A +L+ G +L+ + G + + F+ +
Sbjct: 94 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAY 153
Query: 98 RNIFSLVDELGIKPFTGW----MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSR 153
N+ +L ELGI W M A S+ G EF F + LP PL ++ +
Sbjct: 154 PNVQNLFGELGINDRLQWKEHSMIFAMPSKPG---EFSRFDFPDVLPAPLNGIWAILRNN 210
Query: 154 LPLVDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNVIGPLV 209
+ LT + I V + Y D ++ +E ++ G ER+ V +
Sbjct: 211 ----EMLTWPEKIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMS 266
Query: 210 QVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFL 269
+ F ++ S L I L + + + G E++ P +D +R+ G E
Sbjct: 267 KALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQ 325
Query: 270 DGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVL 329
R+ +++ S ++ T A V A + L+ L+ + F K+
Sbjct: 326 LNSRIKKIELNDDGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDP-WKEIPYFKKLD 384
Query: 330 NLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADF 389
L + V++V +WFD+K+ N + +L + D++ E+ D + ++++ F
Sbjct: 385 KLVGVPVINVHIWFDRKLK--NTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVF 442
Query: 390 YHANELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFPGSYK 444
A E + D ++ + L K D S A ++ + + + P+S+ P
Sbjct: 443 APAEEWISRTDSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEP 502
Query: 445 YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 489
+ ++AGD+ ++ + S E + ++G + +V DY
Sbjct: 503 CRPLQRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKFCSQSIVQDY 547
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/466 (19%), Positives = 191/466 (40%), Gaps = 37/466 (7%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVL---------------DDGNGFGSPDDISMQGF 93
+IV+ G+G GL A +L+ G +L DDG+ + + + F
Sbjct: 112 EIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWY----ETGLHIF 167
Query: 94 WYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLF--YTQ 150
+ + N+ +L ELGI W + S ++ EF F LP PL +
Sbjct: 168 FGAYPNMQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEALPAPLNGILAILKN 227
Query: 151 FSRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLV 209
L +++ ++ L+ A++ + A D I+ ++ ++ G +R+ V +
Sbjct: 228 NEMLTWPEKVKFAIGLLPAMLGGQSYVEA---QDGISVKDWMRKQGVPDRVTDEVFIAMS 284
Query: 210 QVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFL 269
+ F ++ S L I L + + + G E++ P ++ + ++G +
Sbjct: 285 KALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVR 343
Query: 270 DGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVL 329
R+ +E+ ++ T A V A + + L+ F K+
Sbjct: 344 LNSRIKKIELNEDGSVKCFILNDGSTIEGDAFVFATPVDIFKLLLPED-WKEIPYFQKLE 402
Query: 330 NLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADF 389
L + V++V +WFD+K+ N S+ L + D++ E+ D + ++++ F
Sbjct: 403 KLVGVPVINVHIWFDRKLK--NTSDNLLFSRSPLLSVYADMSVTCKEYYDPNKSMLELVF 460
Query: 390 YHANELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFPGSYK 444
A E + D +++ + L+K D S A ++ + + + P+S+ PG
Sbjct: 461 APAEEWVSRSDSEIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEP 520
Query: 445 YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 489
+ + ++AGD+ ++ + S E + ++G A +V DY
Sbjct: 521 CRLLQRSPVEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQAIVQDY 565
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/466 (19%), Positives = 198/466 (42%), Gaps = 40/466 (8%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-----------DISMQGFWYPF 97
++ + G+G AGL A +L+ G V + + G + + F+ +
Sbjct: 2 RVAIAGAGLAGLSCAKYLADAGHTPIVYERRDVLGGKVAAWKDEDGDWYETGLHIFFGAY 61
Query: 98 RNIFSLVDELGIKPFTGWMKSA----QYSEEGLEVEFPIFQDLNQLPTPLGTL--FYTQF 151
N+ L EL I+ W + Q ++ G F D +P P+ + +
Sbjct: 62 PNMLQLFKELNIEDRLQWKSHSMIFNQPTKPGTYSRF----DFPDIPAPINGVAAILSNN 117
Query: 152 SRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQ 210
L +++ L L+ A+I + D + E ++ ER+ V + +
Sbjct: 118 DMLTWEEKIKFGLGLLPAMI---RGQSYVEEMDQYSWTEWLRKQNIPERVNDEVFIAMAK 174
Query: 211 VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLD 270
F ++ SA L L L +K + + G E++ +P ++ ++ RG + L
Sbjct: 175 ALNFIDPDEISATVVLTALNRF-LQEKKGSMMAFLDGAPPERLCQPIVEHVQARGGDVLL 233
Query: 271 GRRVTDFIYDEERCCISDVVCG-----KETYSAGAVVLAVGISTLQELIKNSILCNREEF 325
+ +F+ +++ + + G ++ A A V A+ + L+ L+ ++ F
Sbjct: 234 NAPLKEFVLNDDSSVQAFRIAGIKGQEEQLIEADAYVSALPVDPLKLLLPDAWKA-MPYF 292
Query: 326 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVI 385
++ L + V+++ LWFD+K+T ++ + L+ + D++ E++D +++
Sbjct: 293 QQLDGLQGVPVINIHLWFDRKLT--DIDHLLFSRSPLLS-VYADMSNTCREYEDPDRSML 349
Query: 386 QADFYHANELMPLKDDQVVAKAVSYLSKCI-KDFS---TATVMDHKIRRFPKSLTHFFPG 441
+ F A + + D+ ++A ++ + K + FS A + +KI + P S+ PG
Sbjct: 350 ELVFAPAKDWIGRSDEDILAATMAEIEKLFPQHFSGENPARLRKYKIVKTPLSVYKATPG 409
Query: 442 SYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 487
+Y + N F+ GD+ R+ + S E + ++G A ++
Sbjct: 410 RQQYRPDQASPIANFFLTGDYTMQRYLA-SMEGAVLSGKLTAQAII 454
>sp|Q9R6X4|ZDS_NOSS1 Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=crtQ PE=3 SV=2
Length = 479
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 193/484 (39%), Gaps = 54/484 (11%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG-----------NGFGSPDDISMQGFWYPF 97
++ +VG+G AGL A L+ G +V + + +G G+ ++ + F+ +
Sbjct: 2 RVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGCY 61
Query: 98 RNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQF 151
+F L++++G +K T + L+ F N L F+T
Sbjct: 62 YQLFELMNKVGAFSHLRLKEHTHTFVNKGGRTGALDFRFFTGAPFNGLKA-----FFTT- 115
Query: 152 SRLPLVDRLTSL------PLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVI 205
S+L L D+L + P++ ++DF+ R D I+ + F+ G S + +
Sbjct: 116 SQLSLQDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADWFRSHGGSNGSIKRMW 175
Query: 206 GPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRG 265
P+ F E SA L I F + + + L G+ E + +P + + RG
Sbjct: 176 NPIAYALGFIDCENISARCMLTIFQFFAVRSEASV-LRMLEGSPDEYLHQPILRYLEARG 234
Query: 266 CEFLDGRRVTDFIYDEE--RCCISDVVCGK----ETYSAGAVVLAVGISTLQELIKNSIL 319
+ R+V + Y E + ++ +V K E +A A V A I +Q ++
Sbjct: 235 TKVYTRRQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQE-W 293
Query: 320 CNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNA------CSGFGDSLAWT------- 366
EF + L ++ V +V++ FD VT N +G D+L +T
Sbjct: 294 RKWSEFDNIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGL-DNLLYTADADFSC 352
Query: 367 FFD--LNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 424
F D L D ++ +++Q + + ++ + + + + +
Sbjct: 353 FADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSRELNMT 412
Query: 425 DHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAAN 484
+ + + +SL PG Y T N F+AG + T + S E + V+G AA
Sbjct: 413 WYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSY-TQQDYIDSMEGATVSGRRAAK 471
Query: 485 RVVD 488
++D
Sbjct: 472 VILD 475
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 183/460 (39%), Gaps = 28/460 (6%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-----------DISMQGFWYPF 97
++V+ G+G AGL A +L+ G +L+ + G + + F+ +
Sbjct: 106 QVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAY 165
Query: 98 RNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLF--YTQFSRL 154
NI +L ELGI W + S ++ EF F LP PL ++ L
Sbjct: 166 PNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEML 225
Query: 155 PLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGL 213
+++ +L L+ A++ D T E K+ G +R+ V + +
Sbjct: 226 TWPEKVKFALGLLPAMV---GGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALN 282
Query: 214 FAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRR 273
F ++ S L I L + + + G E++ P +D +R+ G E R
Sbjct: 283 FINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSR 341
Query: 274 VTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 333
+ + + + + A V A + L+ L+ F K+ L
Sbjct: 342 IQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQE-WKEISYFKKLEKLVG 400
Query: 334 IDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHAN 393
+ V++V +WFD+K+ N + SL + D++ E+ D + ++++ F A
Sbjct: 401 VPVINVHIWFDRKLK--NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAE 458
Query: 394 ELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFPGSYKYMMR 448
E + D +++ + L+K D S A ++ + + + P+S+ P
Sbjct: 459 EWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPL 518
Query: 449 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 488
+ ++AGD+ ++ + S E + ++G A VV+
Sbjct: 519 QRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQSVVE 557
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 183/460 (39%), Gaps = 28/460 (6%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-----------DISMQGFWYPF 97
++V+ G+G AGL A +L+ G +L+ + G + + F+ +
Sbjct: 106 QVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAY 165
Query: 98 RNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLF--YTQFSRL 154
NI +L ELGI W + S ++ EF F LP PL ++ L
Sbjct: 166 PNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEML 225
Query: 155 PLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGL 213
+++ +L L+ A++ D T E K+ G +R+ V + +
Sbjct: 226 TWPEKVKFALGLLPAMV---GGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALN 282
Query: 214 FAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRR 273
F ++ S L I L + + + G E++ P +D +R+ G E R
Sbjct: 283 FINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSR 341
Query: 274 VTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 333
+ + + + + A V A + L+ L+ F K+ L
Sbjct: 342 IQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQE-WKEISYFKKLEKLVG 400
Query: 334 IDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHAN 393
+ V++V +WFD+K+ N + SL + D++ E+ D + ++++ F A
Sbjct: 401 VPVINVHIWFDRKLK--NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAE 458
Query: 394 ELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFPGSYKYMMR 448
E + D +++ + L+K D S A ++ + + + P+S+ P
Sbjct: 459 EWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPL 518
Query: 449 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 488
+ ++AGD+ ++ + S E + ++G A VV+
Sbjct: 519 QRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQSVVE 557
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 184/463 (39%), Gaps = 31/463 (6%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-----------DISMQGFWYPF 97
++VV G+G AGL A +L+ G +L+ + G + + F+ +
Sbjct: 98 QVVVAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAY 157
Query: 98 RNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPL 156
NI +L EL I+ W + S ++ EF F LP P+ ++ +
Sbjct: 158 PNIQNLFGELRIEDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPINGIWAILRNN--- 214
Query: 157 VDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNVIGPLVQVG 212
+ LT + I V + Y D +T E K+ G +R+ V + +
Sbjct: 215 -EMLTWPEKVKFAIGLLPAMVGGQPYVEAQDGLTVSEWMKKQGVPDRVNDEVFIAMSKAL 273
Query: 213 LFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGR 272
F ++ S L I L + + + G E++ P +D +R+RG E
Sbjct: 274 NFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSRGGEVRLNS 332
Query: 273 RVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLA 332
R+ + + + + A V A + + L+ F K+ L
Sbjct: 333 RIKKIELNPDGTVKHFALSDGTQITGDAYVCATPVDIFKLLVPQE-WSEITYFKKLEKLV 391
Query: 333 SIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHA 392
+ V++V +WFD+K+ N + SL + D++ E+ D + ++++ F A
Sbjct: 392 GVPVINVHIWFDRKLN--NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPA 449
Query: 393 NELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFPGSYKYMM 447
+E + D +++ + L+K D S A ++ + I + P+S+ P
Sbjct: 450 DEWIGRSDTEIIDATMEELAKLFPDEIAADQSKAKILKYHIVKTPRSVYKTVPNCEPCRP 509
Query: 448 RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 489
+ ++AGD+ ++ + S E + ++G A +V DY
Sbjct: 510 LQRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQSIVQDY 551
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 187/465 (40%), Gaps = 35/465 (7%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-----------DISMQGFWYPF 97
++VVVG+G AGL A +L+ G +L+ + G + + F+ +
Sbjct: 99 EVVVVGAGLAGLSTAKYLADAGHKPILLESRDVLGGKIAAWKDKDGDWYETGLHIFFGAY 158
Query: 98 RNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPL 156
N+ +L ELGI W + S ++ EF F LP PL ++ +
Sbjct: 159 PNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILRNN--- 215
Query: 157 VDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNVIGPLVQVG 212
+ LT + I V + Y D +T E ++ G +R+ V + +
Sbjct: 216 -EMLTWPEKVRFAIGLLPAMVGGQAYVEAQDGLTVTEWMRRQGVPDRVNDEVFIAMSKAL 274
Query: 213 LFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGR 272
F ++ S L I L + + + G E++ P +D +++ G
Sbjct: 275 NFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGRAQLNS 333
Query: 273 RVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNRE--EFLKVLN 330
R+ + + V+ + A V+A + L+ L+ RE F K+
Sbjct: 334 RLQKIELNPDGTVKHFVLGNGNIITGDAYVVAAPVDILKLLLPQEW---REIPYFQKLDK 390
Query: 331 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY 390
L + V++V +WFD+K+ N + L + D++ E+ D + ++++ F
Sbjct: 391 LVGVPVINVHIWFDRKLK--NTYDHLLFTRSPLLSVYADMSVTCKEYYDPNRSMLELVFA 448
Query: 391 HANELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFPGSYKY 445
A E + D +++ + + L+K D S A ++ + + + P+S+ P
Sbjct: 449 PAEEWISRSDSEIIERTMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPC 508
Query: 446 MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 489
+ ++AGD+ ++ + S E + ++G A +V DY
Sbjct: 509 RPLQRSPIEGFYLAGDYTNQKYLA-SMEGAVLSGKLCAQSIVQDY 552
>sp|P74306|ZDS_SYNY3 Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=crtQ PE=3 SV=1
Length = 489
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 103/478 (21%), Positives = 198/478 (41%), Gaps = 43/478 (8%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG-----------NGFGSPDDISMQGFWYPF 97
++ +VG+G AG+ A L G +V + + +G G+ ++ + F+ +
Sbjct: 2 RVAIVGAGLAGMATAVELVDAGHEVELYEARSFIGGKVGSWVDGDGNHIEMGLHVFFGCY 61
Query: 98 RNIFSLVDELGIKPFTGWMKSAQ-YSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPL 156
N+F+L++++G K + + +G + F+ L P F+T S+L
Sbjct: 62 YNLFNLMEKVGAKQNLRLKEHTHTFVNQGGRIGELDFRFLTGAPFNGLKAFFTT-SQLDT 120
Query: 157 VDR------LTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQ 210
D+ L + P++ ++DFD R D I+ E F G +E + + P+
Sbjct: 121 KDKIANSIALATSPIVRGLVDFDGAMKTIRDLDRISFAEWFLSKGGNEGSLKKMWDPIAY 180
Query: 211 VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLD 270
F E SA L I + + A + L G+ +E + +P + + RG +F
Sbjct: 181 ALGFIDTENISARCMLTI-FQLFAARTEASVLRMLEGSPQEYLHKPIQEYLEQRGTKFYT 239
Query: 271 GRRVTDF---IYDEER----CCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNRE 323
+V + + D E I+D V K T +A A V A + ++ L+ + +
Sbjct: 240 RHKVKEIKTKVTDGETRVTGLIINDGVETK-TVTADAYVAACDVPGIKNLLPENWRTQWD 298
Query: 324 EFLKVLNLASIDVVSVKLWFDKKVTVPN----VSNACSGFG-DSLAWT-------FFD-- 369
F K+ L ++ V +V+L FD VT N FG D+L +T F D
Sbjct: 299 FFNKIYYLDTVPVATVQLRFDGWVTEMNDPAKRKQLEQAFGLDNLLYTSDAEFSCFADLA 358
Query: 370 LNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIR 429
L D ++ +++Q + M ++ + + + + + + + +
Sbjct: 359 LTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPSAADLNMTWYSVI 418
Query: 430 RFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 487
+ +SL PG + T N F+AG + T + S E + ++G +AA ++
Sbjct: 419 KLAQSLYREAPGMDLFRPSQATPIANFFLAGSY-TQQDYIDSMEGATLSGRQAAQAIL 475
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/470 (20%), Positives = 187/470 (39%), Gaps = 45/470 (9%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVL---------------DDGNGFGSPDDISMQGF 93
+IV+ G+G GL A +L+ G +L DDG+ + + + F
Sbjct: 113 EIVIAGAGLGGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWY----ETGLHIF 168
Query: 94 WYPFRNIFSLVDELGIKPFTGW----MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYT 149
+ + NI +L ELGI W M A S+ G EF F LP PL +
Sbjct: 169 FGAYPNIQNLFGELGINDRLQWKEHSMIFAMPSKPG---EFSRFDFSEALPAPLNGIL-- 223
Query: 150 QFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNVI 205
+ L + LT + I + + Y D I+ ++ ++ G +R+ V
Sbjct: 224 --AILKNNEMLTWPEKVKFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQGVPDRVTDEVF 281
Query: 206 GPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRG 265
+ + F ++ S L I L + + + G E++ P ++ + ++G
Sbjct: 282 IAMSKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKG 340
Query: 266 CEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEF 325
+ R+ +E+ S ++ A V A + + L+ F
Sbjct: 341 GQVRLNSRIKKIELNEDGSVKSFILSDGSAIEGDAFVFAAPVDIFKLLLPED-WKEIPYF 399
Query: 326 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVI 385
K+ L + V++V +WFD+K+ N + SL + D++ E+ + + +++
Sbjct: 400 QKLEKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSSLLSVYADMSVTCKEYYNPNQSML 457
Query: 386 QADFYHANELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFP 440
+ F A E + D +++ + L+ D S A ++ + + + P+S+ P
Sbjct: 458 ELVFAPAEEWISRSDSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVP 517
Query: 441 GSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV-DY 489
G + ++AGD+ ++ + S E + ++G A +V DY
Sbjct: 518 GCEPCRPLQRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQAIVQDY 566
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/459 (19%), Positives = 185/459 (40%), Gaps = 30/459 (6%)
Query: 50 IVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-----------DISMQGFWYPFR 98
IV+ G+G AGL A +L+ G +L+ + G + + F+ +
Sbjct: 101 IVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYP 160
Query: 99 NIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLV 157
+ +L ELGI W + S ++ EF F LP+PL ++ +
Sbjct: 161 YVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPSPLNGIWAILRNN---- 216
Query: 158 DRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNVIGPLVQVGL 213
+ LT + I + + Y D ++ +E K+ G ER+ V + +
Sbjct: 217 EMLTWPEKVKFAIGLLPAMLGGQPYVEAQDGLSVQEWMKKQGVPERVADEVFIAMSKALN 276
Query: 214 FAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRR 273
F ++ S L I L + + + G E++ P +D +++ G E R
Sbjct: 277 FINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDYIQSLGGEVHLNSR 335
Query: 274 VTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 333
+ +++ S ++ + A V A + L+ L+ ++ F ++ L
Sbjct: 336 IQKIELNDDGTVKSFLLNNGKVMEGDAYVFATPVDILKLLLPDN-WKGIPYFQRLDKLVG 394
Query: 334 IDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHAN 393
+ V++V +WFD+K+ N + L + D++ E+ + ++++ F A
Sbjct: 395 VPVINVHIWFDRKLK--NTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAE 452
Query: 394 ELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFPGSYKYMMR 448
E + DD ++ ++ L+K D S A ++ + + + P+S+ P
Sbjct: 453 EWISRSDDDIIQATMTELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPI 512
Query: 449 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 487
+ ++AGD+ ++ + S E + ++G A +V
Sbjct: 513 QRSPIEGFYLAGDYTKQKYLA-SMEGAVLSGKLCAQAIV 550
>sp|Q31N27|ZDS_SYNE7 Probable zeta-carotene desaturase OS=Synechococcus elongatus
(strain PCC 7942) GN=zds PE=3 SV=1
Length = 481
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 175/437 (40%), Gaps = 39/437 (8%)
Query: 83 GSPDDISMQGFWYPFRNIFSLVDELGIKPFTGWMKSAQ---YSEEGLEV-----EFPIFQ 134
G+ ++ + F++ + N+F+L+ ++G F + A + +G EV FPI
Sbjct: 47 GNHIEMGLHVFFFNYANLFALMRKVG--AFENLLPKAHTHTFINKGGEVGELDFRFPIGA 104
Query: 135 DLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQF 194
N L T T +L L + PL+ ++D++ R D I+ + F+
Sbjct: 105 PFNGLKAFFTTSQLTWLDKLQNALALGTSPLVRGILDYEGAMKIIRALDRISFADWFRSH 164
Query: 195 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIF 254
G SE + + P+ F E SA L + + + A + L G+ E +
Sbjct: 165 GGSEGSLKRMWNPIAYALGFIDTENISARCMLTV-FQMFAAKTEASKLNLLAGSPAEYLH 223
Query: 255 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAV--------VLAVG 306
+P +D ++ RG RRV + Y E VV G + AV + A
Sbjct: 224 KPILDYIQARGATLHLRRRVREIEYTETNG--QTVVTGLQIADGDAVERVEADVYLAACD 281
Query: 307 ISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVT------VPNVSNACSGFG 360
+ +Q L+ + EF + L ++ V +V+L FD VT + + +G
Sbjct: 282 VPGIQRLLPEA-WRKWSEFDNIYKLDAVPVATVQLRFDGWVTELGDREKRHQLDHATGL- 339
Query: 361 DSLAWT-------FFD--LNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYL 411
D+L +T F D L+ D ++ +++Q + + +K++ + + +
Sbjct: 340 DNLLYTADADFSCFTDLALSSPKDYYRKGQGSLLQCVLTPGDPFIAMKNEDIAQHVLKQV 399
Query: 412 SKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWS 471
+ + + + +SL PG + T N F+AG + + S
Sbjct: 400 HELFPSSRDLNMTWSNVVKLAQSLYREAPGMDPFRPDQKTPIANFFLAGSYTQQDYID-S 458
Query: 472 QERSYVTGLEAANRVVD 488
E + ++G AA +++
Sbjct: 459 MEGATISGRRAAKAMLE 475
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 103/491 (20%), Positives = 193/491 (39%), Gaps = 63/491 (12%)
Query: 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD----GNGFGSPDD-------ISMQGFWY 95
K K+ ++G+G AG+ A L QG +V + D G GS D + + F+
Sbjct: 56 KLKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFG 115
Query: 96 PFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYT 149
+ N+F L+ ++G +K T + + L+ FP+ ++ + L T
Sbjct: 116 CYNNLFRLMKKVGAEKNLLVKDHTHTFINKDGTIGELDFRFPVGAPIHGIRAFLVTNQLK 175
Query: 150 QFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLV 209
+ +L L P++ A++D D R DSI+ + F G + + + P+
Sbjct: 176 PYDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDWFLSKGGTRASIQRMWDPVA 235
Query: 210 QVGLFAPAEQCSAAATLGILYFIILAHQKNFDLV-WCRGTLREKIFEPWMDSMRTRGCEF 268
F + SA L I F + A + L+ +G+ + P + RG
Sbjct: 236 YALGFIDCDNMSARCMLTI--FSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRI 293
Query: 269 LDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSIL---CN---- 321
+ +YD+ ETY G LA+ +T ++++K + C+
Sbjct: 294 HLRWGCREILYDKS--------ADGETYVTG---LAISKATNKKIVKADVYVAACDVPGI 342
Query: 322 --------REE--FLKVLNLASIDVVSVKLWFDKKVT----VPNVSNACSGFG-DSLAWT 366
RE F + L + VV+V+L ++ VT + G D+L +T
Sbjct: 343 KRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLLYT 402
Query: 367 -------FFD--LNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKD 417
F D L D + + T++Q + M + +D+++ K +++
Sbjct: 403 PDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPS 462
Query: 418 FSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYV 477
V + + +SL PG + T N F+AG + T + S E + +
Sbjct: 463 SRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSY-TKQDYIDSMEGATL 521
Query: 478 TGLEAANRVVD 488
+G +A++ + D
Sbjct: 522 SGRQASSYICD 532
>sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes
erecta PE=2 SV=1
Length = 587
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 195/492 (39%), Gaps = 65/492 (13%)
Query: 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD----GNGFGSPDD-------ISMQGFWY 95
K K+ ++G+G AG+ A L QG +V + + G GS D + + F+
Sbjct: 82 KLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKQGNHIEMGLHVFFG 141
Query: 96 PFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYT 149
+ N+F L+ ++G +K T + L+ FP+ L+ + L T
Sbjct: 142 CYNNLFRLLKKVGAEKNLLVKDHTHTFVNRGGELGELDFRFPVGAPLHGINAFLTTNQLK 201
Query: 150 QFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLV 209
+ + L P++ A++D D R D+I+ E F G + + + P+
Sbjct: 202 TYDKARNAVALALSPVVRALVDPDGAMTQIRNLDNISFSEWFMSKGGTRTSIQRMWDPVA 261
Query: 210 QVGLFAPAEQCSAAATLGILYFIILAHQKNFDLV-WCRGTLREKIFEPWMDSMRTRGCEF 268
F + SA L I F + A + L+ +G+ + P D + +G F
Sbjct: 262 YALGFIDCDNISARCMLTI--FSLFATKTEASLLRMLKGSPDVYLSGPIRDYIIEKGGRF 319
Query: 269 LDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSIL---CNR--- 322
+ +Y++ ETY G LA+ +T ++++K + C+
Sbjct: 320 HLRWGCREILYEKS--------ANGETYVTG---LAMSKATQKQIVKADVYIAACDVPGI 368
Query: 323 -----------EEFLKVLNLASIDVVSVKLWFDKKVT-VPNVSNA-----CSGFGDSLAW 365
E F + L + VV+V+L ++ VT + +V + +G D+L +
Sbjct: 369 KRLLPSNWREWEFFDNIYKLVGVPVVTVQLRYNGWVTELQDVERSRQLRQAAGL-DNLLY 427
Query: 366 T-------FFD--LNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIK 416
T F D L D + + +++Q + MPL +++++++ +
Sbjct: 428 TPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQVLALFP 487
Query: 417 DFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSY 476
V + + +SL PG + T N F+AG + T + S E +
Sbjct: 488 SSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSY-TKQDYIDSMEGAT 546
Query: 477 VTGLEAANRVVD 488
++G +A+ + D
Sbjct: 547 LSGRQASAFICD 558
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 111/531 (20%), Positives = 203/531 (38%), Gaps = 57/531 (10%)
Query: 2 LASLRAAPTLCLSKRRYRNGFCCRASTLQSNANGDRNS------TNNNGKNKKKIVVVGS 55
LA RA P L R + R ST+ S R+ + K K+ ++G+
Sbjct: 14 LAPRRARPGTGLVPPRRASAVAAR-STVTSPTWRQRSQRLFPPEPEHYRGPKLKVAIIGA 72
Query: 56 GWAGLGAAHHLSKQGFDVTVLDD----GNGFGSPDD-------ISMQGFWYPFRNIFSLV 104
G AG+ A L QG +V + + G GS D + + F+ + N+F L+
Sbjct: 73 GLAGMSTAVELLDQGHEVDLYESRPFIGGKVGSFVDRQGNHIEMGLHVFFGCYSNLFRLM 132
Query: 105 DELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVD 158
++G +K T + + L+ FP+ L+ + L T + +
Sbjct: 133 KKVGADNNLLVKEHTHTFVNKGGTIGELDFRFPVGAPLHGIQAFLRTNQLKVYDKARNAV 192
Query: 159 RLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAE 218
L P++ A++D D R D I+ + F G + + P+ F +
Sbjct: 193 ALALSPVVRALVDPDGALQQVRDLDDISFSDWFMSKGGTRESITRMWDPVRYALGFIDCD 252
Query: 219 QCSAAATLGILYFIILAHQKNFDLV-WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDF 277
SA L I F + A + L+ +G+ + P + RG F +
Sbjct: 253 NISARCMLTI--FTLFATKTEASLLRMLKGSPDVYLSGPIKKYITDRGGRFHLRWGCREV 310
Query: 278 IYDEE-------RCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 330
+Y++ + + +E A A V A + ++ L+ S E F +
Sbjct: 311 LYEKSPDGETYVKGLLLTKATSREIIKADAYVAACDVPGIKRLLP-SEWREWEMFDNIYK 369
Query: 331 LASIDVVSVKLWFDKKVT----VPNVSNACSGFG-DSLAWT-------FFD--LNKIYDE 376
L + VV+V+L ++ VT + G D+L +T F D L+ D
Sbjct: 370 LDGVPVVTVQLRYNGWVTELQDLEKSRQLQRAVGLDNLLYTADADFSCFSDLALSSPADY 429
Query: 377 HKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLT 436
+ + ++IQA + MPL ++++++K + + V + + +SL
Sbjct: 430 YIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSSRGLEVTWSSVVKIGQSLY 489
Query: 437 HFFPGSYKYMMRGFTSFPNLFMAG-----DWITTRHG---SWSQERSYVTG 479
PG+ + T N F++G D+I + G S + +Y+ G
Sbjct: 490 REAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAYICG 540
>sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=ZDS PE=1 SV=1
Length = 588
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 100/487 (20%), Positives = 185/487 (37%), Gaps = 55/487 (11%)
Query: 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD----GNGFGSPDD-------ISMQGFWY 95
K K+ ++G+G AG+ A L QG +V + + G GS D + + F+
Sbjct: 79 KLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRGNHIEMGLHVFFG 138
Query: 96 PFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYT 149
+ N+F L+ ++G +K T + L+ FP+ L+ + L T
Sbjct: 139 CYNNLFRLMKKVGAEKNLLVKEHTHTFVNKGGEIGELDFRFPVGAPLHGINAFLSTNQLK 198
Query: 150 QFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLV 209
+ + L P++ A++D D R DS++ + F G + + + P+
Sbjct: 199 TYDKARNAVALALSPVVRALVDPDGALQQIRDLDSVSFSDWFMSKGGTRASIQRMWDPVA 258
Query: 210 QVGLFAPAEQCSAAATLGILYFIILAHQKNFDL---------VWCRGTLREKIFEPWMDS 260
F + SA L I F + A + L V+ G +++ I +
Sbjct: 259 YALGFIDCDNISARCMLTI--FALFATKTEASLLRMLKGSPDVYLSGPIKKYIIDKGGRF 316
Query: 261 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKET----YSAGAVVLAVGISTLQELIKN 316
GC R V + +S + K T A A V A + ++ L+
Sbjct: 317 HLRWGC-----REVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACVVPGIKRLVPQ 371
Query: 317 SILCNREEFLKVLNLASIDVVSVKLWFDKKVTV------PNVSNACSGFGDSLAWT---- 366
E F + L + VV+V+L ++ VT S +G D+L +T
Sbjct: 372 K-WRELEFFGNIYKLIGVPVVTVQLRYNGWVTELQDLERSRQSKRATGL-DNLLYTPDAD 429
Query: 367 ---FFD--LNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTA 421
F D L D + + +++Q + MPL +++++ + +
Sbjct: 430 FSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPSSQGL 489
Query: 422 TVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 481
V + + +SL PG + T N F+AG + T + S E + ++G +
Sbjct: 490 EVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSY-TKQDYIDSMEGATLSGRQ 548
Query: 482 AANRVVD 488
A+ + D
Sbjct: 549 ASAYICD 555
>sp|Q9SE20|ZDS_SOLLC Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=ZDS PE=2 SV=1
Length = 588
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 100/484 (20%), Positives = 184/484 (38%), Gaps = 62/484 (12%)
Query: 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD----GNGFGSPDD-------ISMQGFWY 95
K K+ ++G+G AG+ A L QG +V + + G GS D + + F+
Sbjct: 79 KLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDRRGNHIEMGLHVFFG 138
Query: 96 PFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYT 149
+ N+F L+ ++G +K T + L+ FP+ L+ + L T
Sbjct: 139 CYNNLFRLLKKVGAEKNLLVKEHTHTFVNKGGEIGELDFRFPVGAPLHGINAFLSTNQLK 198
Query: 150 QFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLV 209
+ + L P++ A++D D R D+++ E F G + + + P+
Sbjct: 199 IYDKARNAVALALSPVVRALVDPDGALQQIRDLDNVSFSEWFLSKGGTRASIQRMWDPVA 258
Query: 210 QVGLFAPAEQCSAAATLGILYFIILAHQKNFDL---------VWCRGTLREKIFEPWMDS 260
F + SA L I F + A + L V+ G +++ I +
Sbjct: 259 YALGFIDCDNMSARCMLTI--FALFATKTEASLLRMLKGSPDVYLSGPIKKYIMDKGGRF 316
Query: 261 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKET----YSAGAVVLAVGISTLQELIKN 316
GC R V + +S + K T A A V A + ++ L+
Sbjct: 317 HLRWGC-----REVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACDVPGIKRLVPQ 371
Query: 317 SILCNREEFLKVLNLASIDVVSVKLWFDKKVT-VPNVSNA-----CSGFGDSLAWT---- 366
E F + L + VV+V+L ++ VT + ++ + +G D+L +T
Sbjct: 372 K-WRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGL-DNLLYTPDAD 429
Query: 367 ---FFDLNKIY--DEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTA 421
F DL D + + +++Q + MPL +D+++ + +
Sbjct: 430 FSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVLALFPSSQGL 489
Query: 422 TVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAG-----DWITTRHG---SWSQE 473
V + + +SL PG + T N F+AG D+I + G S Q
Sbjct: 490 EVTWSSVLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQA 549
Query: 474 RSYV 477
+Y+
Sbjct: 550 SAYI 553
>sp|O49901|ZDS_NARPS Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=ZDS1 PE=2 SV=1
Length = 574
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 186/476 (39%), Gaps = 43/476 (9%)
Query: 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD----GNGFGSPDD-------ISMQGFWY 95
K K+ ++G+G AG+ A L QG +V + + G GS D + + F+
Sbjct: 64 KLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRQFIGGKVGSFVDKRGNHIEMGLHVFFG 123
Query: 96 PFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYT 149
+ N+F L+ ++G +K T + L+ P+ L+ + L T
Sbjct: 124 CYNNLFRLMKKVGADENLLVKDHTHTFVNRGGEIGELDFRLPMGAPLHGIRAFLTTNQLK 183
Query: 150 QFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLV 209
+ + L P++ A+ID + R D+I+ + F G + + + P+
Sbjct: 184 PYDKARNAVALALSPVVRALIDPNGAMQDIRNLDNISFSDWFLSKGGTRMSIQRMWDPVA 243
Query: 210 QVGLFAPAEQCSAAATLGILYFIILAHQKNFDLV-WCRGTLREKIFEPWMDSMRTRGCEF 268
F + SA L I F + A + L+ +G+ + P + +G F
Sbjct: 244 YALGFIDCDNISARCMLTI--FSLFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRF 301
Query: 269 LDGRRVTDFIYDE---ERCCISDVVCGKET----YSAGAVVLAVGISTLQELIKNSILCN 321
+ +YDE I+ + K T A V A + ++ LI S
Sbjct: 302 HLRWGCREILYDELSNGDTYITGIAMSKATNKKLVKADVYVAACDVPGIKRLIP-SEWRE 360
Query: 322 REEFLKVLNLASIDVVSVKLWFDKKVT----VPNVSNACSGFG-DSLAWT-------FFD 369
+ F + L + VV+V+L ++ VT + + G D+L +T F D
Sbjct: 361 WDLFDNIYKLVGVPVVTVQLRYNGWVTEMQDLEKSRQLRAAVGLDNLLYTPDADFSCFSD 420
Query: 370 --LNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHK 427
L+ D + + ++IQA + MPL +D ++ + + V+
Sbjct: 421 LALSSPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPSSQGLEVLWSS 480
Query: 428 IRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAA 483
+ + +SL PG + T N F+AG + T + S E + ++G +AA
Sbjct: 481 VVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSY-TKQDYIDSMEGATLSGRQAA 535
>sp|Q54IT3|AOFA_DICDI Probable flavin-containing monoamine oxidase A OS=Dictyostelium
discoideum GN=maoA PE=3 SV=1
Length = 456
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 50 IVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS-PDDISMQGFWYPF---------RN 99
+V+VG G GL AA+ K G +V VL + FG + I ++ +W+ +
Sbjct: 7 VVIVGGGLTGLNAAYQFKKAGLNVMVLKPKDRFGGRTESIKVEDYWFDLGGQWMGGTHKY 66
Query: 100 IFSLVDELGIKPF 112
+ L DELG+K F
Sbjct: 67 LKELCDELGVKSF 79
>sp|O96566|A37C_DROSI Protein anon-37Cs (Fragment) OS=Drosophila simulans GN=anon-37Cs
PE=3 SV=1
Length = 501
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 14 SKRRYRNGFCCRASTLQSNANGD--RNSTNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGF 71
S+RR N A LQ++ GD RN + + +IVVVG+G GL AA HL GF
Sbjct: 5 SRRRLYN-----ARVLQADNIGDKQRNPDVDAARQNTQIVVVGAGLPGLSAAQHLLYNGF 59
Query: 72 DVTVL 76
TV+
Sbjct: 60 RRTVI 64
>sp|Q4JHE2|OXLA_NOTSC L-amino-acid oxidase OS=Notechis scutatus scutatus PE=2 SV=1
Length = 517
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 7 AAPTLCLSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHL 66
AA C RR C + + + RN N N K +VVVG+G AGL AA+ L
Sbjct: 13 AALESCADDRRRPLEECFQEADYEEFLEIARNGLNETS-NPKHVVVVGAGMAGLSAAYVL 71
Query: 67 SKQGFDVTVLDDGNGFG 83
+ G +VT+L+ G
Sbjct: 72 AGAGHNVTLLEASERVG 88
>sp|A8QL51|OXLA_BUNMU L-amino-acid oxidase OS=Bungarus multicinctus PE=2 SV=1
Length = 517
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 7 AAPTLCLSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHL 66
AA C RR C R + + RN N K +VVVG+G AGL AA+ L
Sbjct: 13 AAFGSCADDRRSPLEECFREADYEEFLEIARNGLKKTS-NPKHVVVVGAGMAGLSAAYVL 71
Query: 67 SKQGFDVTVLDDGNGFG 83
K G VT+L+ + G
Sbjct: 72 EKAGHRVTLLEASDRVG 88
>sp|P18487|A37C_DROME Protein anon-37Cs OS=Drosophila melanogaster GN=anon-37Cs PE=2
SV=3
Length = 504
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 26 ASTLQSNANGDRNSTNN--NGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVL 76
A LQ++ GD+ + + + +IVVVG+G AGL AA HL GF TV+
Sbjct: 15 ARVLQADNIGDKQRSPDLEAARQNTQIVVVGAGLAGLSAAQHLLSHGFRRTVI 67
>sp|A6W0S5|MNMC_MARMS tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Marinomonas sp. (strain MWYL1) GN=mnmC
PE=3 SV=1
Length = 674
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYP 96
K++VVG+G AG A+ L+KQG V V + GN + QG YP
Sbjct: 266 KVLVVGAGLAGANTAYALAKQGIKVEVWEQGNCIAGGASGNPQGMLYP 313
>sp|A6MFL0|OXLA_DEMVE L-amino-acid oxidase OS=Demansia vestigiata PE=2 SV=1
Length = 517
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 7 AAPTLCLSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHL 66
AA C RR G C R + + + N N K++VVVG+G AGL AA+ L
Sbjct: 13 AALESCADDRRNPLGECFREADYEEFVDIATNGLKQTS-NPKRVVVVGAGMAGLSAAYVL 71
Query: 67 SKQGFDVTVLDDGNGFG 83
+ G +V +L+ G
Sbjct: 72 AGAGHNVMLLEASERVG 88
>sp|Q4JHE1|OXLA_PSEAU L-amino-acid oxidase OS=Pseudechis australis PE=1 SV=1
Length = 517
Score = 39.7 bits (91), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 7 AAPTLCLSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHL 66
AA C RR C R + + +N N K++VVVG+G AGL AA+ L
Sbjct: 13 AALGSCADDRRRPLEECFREADYEEFLEIAKNGLQRTS-NPKRVVVVGAGMAGLSAAYVL 71
Query: 67 SKQGFDVTVLDDGNGFG 83
+ G VT+L+ G
Sbjct: 72 AGAGHQVTLLEASERVG 88
>sp|P56742|OXLA_CROAT L-amino-acid oxidase OS=Crotalus atrox PE=1 SV=2
Length = 516
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWY 95
N K++V+VG+G AGL AA+ L+ G VTVL+ G + WY
Sbjct: 50 NPKRVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGGRVRTYRKKDWY 99
>sp|F8S0Z5|OXLA2_CROAD L-amino-acid oxidase OS=Crotalus adamanteus PE=2 SV=1
Length = 516
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWY 95
N K++V+VG+G AGL AA+ L+ G VTVL+ G + WY
Sbjct: 50 NPKRVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGGRVRTYRKKDWY 99
>sp|O93364|OXLA_CROAD L-amino-acid oxidase OS=Crotalus adamanteus PE=1 SV=1
Length = 516
Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWY 95
N K++V+VG+G AGL AA+ L+ G VTVL+ G + WY
Sbjct: 50 NPKRVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGGRVRTYRKKDWY 99
>sp|A8QL52|OXLA_BUNFA L-amino-acid oxidase OS=Bungarus fasciatus PE=1 SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 12 CLSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGF 71
C RR C R + + RN N K +VVVG+G AGL AA+ L+ G
Sbjct: 18 CADDRRSALEECFREADYEEFLEIARNGLKKTS-NPKHVVVVGAGMAGLSAAYVLAGAGH 76
Query: 72 DVTVLDDGNGFG 83
VT+L+ + G
Sbjct: 77 RVTLLEASDRVG 88
>sp|Q4JHE3|OXLA_OXYSC L-amino-acid oxidase OS=Oxyuranus scutellatus scutellatus PE=2
SV=1
Length = 517
Score = 38.9 bits (89), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 7 AAPTLCLSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHL 66
AA C RR C R + + RN N K +VVVG+G AGL AA+ L
Sbjct: 13 AALESCADVRRNPLEECFREADYEEFLEIARNGLKKTS-NPKHVVVVGAGMAGLSAAYVL 71
Query: 67 SKQGFDVTVLDDGNGFG 83
+ G VT+L+ G
Sbjct: 72 AGAGHKVTLLEASERVG 88
>sp|Q5WWF9|MNMC_LEGPL tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Legionella pneumophila (strain Lens)
GN=mnmC PE=3 SV=1
Length = 666
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLV 104
K ++ ++VG G AG A+ L+K+G++VT+L++ G + Q +P +I+
Sbjct: 275 KEERTALIVGGGLAGCFIANSLAKRGWEVTILEEKEKVGCGGSANQQAVLFPKLSIYK-- 332
Query: 105 DELGIKPFTGWM 116
PFT +M
Sbjct: 333 -----SPFTQFM 339
>sp|O96570|A37C_DROLE Protein anon-37Cs OS=Drosophila lebanonensis GN=anon-37Cs PE=3
SV=1
Length = 544
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 43 NGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVL 76
+ K +IVV+G+G AGL AA HL + GF T++
Sbjct: 55 SAKQNTQIVVIGAGLAGLSAAQHLLRHGFRSTIV 88
>sp|A8QL58|OXLA_NAJAT L-amino-acid oxidase (Fragment) OS=Naja atra PE=1 SV=1
Length = 449
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 7 AAPTLCLSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHL 66
AA C RR C + + + RN N K +VVVG+G AGL AA+ L
Sbjct: 13 AALESCADDRRSPLEECFQQNDYEEILEIARNGLKKTS-NPKHVVVVGAGMAGLSAAYVL 71
Query: 67 SKQGFDVTVLDDGNGFG 83
+ G VT+L+ G
Sbjct: 72 AGAGHKVTLLEASERVG 88
>sp|A3M0Z0|DADA_ACIBT D-amino acid dehydrogenase small subunit OS=Acinetobacter
baumannii (strain ATCC 17978 / NCDC KC 755) GN=dadA
PE=3 SV=2
Length = 421
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 7/55 (12%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG------FGSPDDISMQGFWYPF 97
+++V+GSG G+ +A++L++QG +VTVLD +G FG+ IS G+ P+
Sbjct: 2 RVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAEETSFGNAGQIS-PGYSTPW 55
>sp|O48917|SQD1_ARATH UDP-sulfoquinovose synthase, chloroplastic OS=Arabidopsis thaliana
GN=SQD1 PE=1 SV=1
Length = 477
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 2 LASLRAAPTLCLSKRRYRNGFCCRAST--LQSNANGDRNSTNNNGKNKKKIVVVGSGWAG 59
L S + L +++ R RA+ + A + ++ N++ K K+ +V+ G G+ G
Sbjct: 38 LLSRSSLKGLLFQEKKPRKSCVFRATAVPITQQAPPETSTNNSSSKPKRVMVIGGDGYCG 97
Query: 60 LGAAHHLSKQGFDVTVLDD 78
A HLSK+ ++V ++D+
Sbjct: 98 WATALHLSKKNYEVCIVDN 116
>sp|B0V6N4|DADA_ACIBY D-amino acid dehydrogenase small subunit OS=Acinetobacter
baumannii (strain AYE) GN=dadA PE=3 SV=1
Length = 421
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 7/55 (12%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG------FGSPDDISMQGFWYPF 97
+++V+GSG G+ +A++L++QG +VTVLD +G FG+ IS G+ P+
Sbjct: 2 RVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAEETSFGNAGQIS-PGYSTPW 55
>sp|B7I1Q9|DADA_ACIB5 D-amino acid dehydrogenase small subunit OS=Acinetobacter
baumannii (strain AB0057) GN=dadA PE=3 SV=1
Length = 421
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 7/55 (12%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG------FGSPDDISMQGFWYPF 97
+++V+GSG G+ +A++L++QG +VTVLD +G FG+ IS G+ P+
Sbjct: 2 RVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAEETSFGNAGQIS-PGYSTPW 55
>sp|B7H2E9|DADA_ACIB3 D-amino acid dehydrogenase small subunit OS=Acinetobacter
baumannii (strain AB307-0294) GN=dadA PE=3 SV=1
Length = 421
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 7/55 (12%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG------FGSPDDISMQGFWYPF 97
+++V+GSG G+ +A++L++QG +VTVLD +G FG+ IS G+ P+
Sbjct: 2 RVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAEETSFGNAGQIS-PGYSTPW 55
>sp|B0VNF5|DADA_ACIBS D-amino acid dehydrogenase small subunit OS=Acinetobacter
baumannii (strain SDF) GN=dadA PE=3 SV=1
Length = 421
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 6/47 (12%)
Query: 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG------FGSPDDIS 89
+++V+GSG G+ +A++L++QG +VTVLD +G FG+ IS
Sbjct: 2 RVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAEETSFGNAGQIS 48
>sp|Q14534|ERG1_HUMAN Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=1 SV=3
Length = 574
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 13 LSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFD 72
L RR R G ++L A T+ + +N ++++VG+G G A LS+ G
Sbjct: 93 LEARRRRKGTNISETSLIGTAA----CTSTSSQNDPEVIIVGAGVLGSALAAVLSRDGRK 148
Query: 73 VTVLDDGNGFGSPDDISMQ----GFWYPFRN--IFSLVDELGIKPFTGWMKSAQYSEEGL 126
VTV++ PD I + G ++ ++ + V+ L + G+M Q S+ +
Sbjct: 149 VTVIE--RDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEV 206
Query: 127 EVEFPIFQDLNQL 139
++ +P+ ++ NQ+
Sbjct: 207 QIPYPLSEN-NQV 218
>sp|P37906|PUUB_ECOLI Gamma-glutamylputrescine oxidoreductase OS=Escherichia coli
(strain K12) GN=puuB PE=1 SV=2
Length = 426
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 50 IVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN-GFGS 84
+ VVG G+ GL +A HL++ GFDV VL+ GFG+
Sbjct: 30 VCVVGGGYTGLSSALHLAEAGFDVVVLEASRIGFGA 65
>sp|Q31JE7|MNMC_THICR tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Thiomicrospira crunogena (strain XCL-2)
GN=mnmC PE=3 SV=1
Length = 674
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 11 LCLSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHLSKQG 70
+C + + F +A + G + KK +V+G+G AG A+ L+ QG
Sbjct: 242 MCFGRYAHSRPFSSKAPWFERAKGGH--------PSPKKAIVIGAGLAGATVAYQLASQG 293
Query: 71 FDVTVLDDGNGFGSPDDISMQGFWYPF 97
VTVL+ ++ G +P
Sbjct: 294 LSVTVLEQEKAVAQQASGNLAGAIHPL 320
>sp|B0VXW0|OXLA_SISCA L-amino-acid oxidase OS=Sistrurus catenatus edwardsii PE=2 SV=1
Length = 516
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWY 95
N K++V+VG+G +GL AA+ L+ G VTVL+ G + WY
Sbjct: 50 NPKRVVIVGAGMSGLSAAYVLAGAGHQVTVLEASERVGGRVRTYRKEDWY 99
>sp|Q6STF1|OXLA_GLOHA L-amino-acid oxidase OS=Gloydius halys PE=1 SV=1
Length = 504
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLD 77
N K +VVVG+G +GL AA+ LS G VTVL+
Sbjct: 50 NPKHVVVVGAGMSGLSAAYVLSGAGHQVTVLE 81
>sp|Q6TGQ8|OXLA_BOTMO L-amino-acid oxidase (Fragment) OS=Bothrops moojeni PE=1 SV=1
Length = 478
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLD 77
N K++V+VG+G +GL AA+ L+ G VTVL+
Sbjct: 38 NPKRVVIVGAGMSGLSAAYVLANAGHQVTVLE 69
>sp|Q6TGQ9|OXLA_BOTJR L-amino-acid oxidase (Fragment) OS=Bothrops jararacussu PE=1 SV=1
Length = 497
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLD 77
N K++V+VG+G +GL AA+ L+ G VTVL+
Sbjct: 45 NPKRVVIVGAGMSGLSAAYVLANAGHQVTVLE 76
>sp|A5IC27|MNMC_LEGPC tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Legionella pneumophila (strain Corby)
GN=mnmC PE=3 SV=1
Length = 666
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLV 104
K+++ ++VG G AG A+ L+K+G++VT+L++ G + Q +P + +
Sbjct: 275 KDERTALIVGGGLAGCFIANSLAKRGWEVTILEEKEKVGCGGSANQQAVLFPKLSTYK-- 332
Query: 105 DELGIKPFTGWM 116
PFT +M
Sbjct: 333 -----SPFTQFM 339
>sp|Q5ZVA8|MNMC_LEGPH tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=mnmC PE=3 SV=1
Length = 666
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLV 104
K+++ ++VG G AG A+ L+K+G++VT+L++ G + Q +P + +
Sbjct: 275 KDERTALIVGGGLAGCFIANSLAKRGWEVTILEEKEKVGCGGSANQQAVLFPKLSTYK-- 332
Query: 105 DELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQL 139
PFT +M + + E + DL +L
Sbjct: 333 -----SPFTQFMLYSFLYANDVYKELLKYYDLGEL 362
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,474,590
Number of Sequences: 539616
Number of extensions: 8855192
Number of successful extensions: 27466
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 27158
Number of HSP's gapped (non-prelim): 333
length of query: 533
length of database: 191,569,459
effective HSP length: 122
effective length of query: 411
effective length of database: 125,736,307
effective search space: 51677622177
effective search space used: 51677622177
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)