Query 009508
Match_columns 533
No_of_seqs 185 out of 2004
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 06:46:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009508.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009508hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 7.6E-36 2.6E-40 304.7 39.8 407 48-487 1-424 (425)
2 3nrn_A Uncharacterized protein 100.0 8.4E-33 2.9E-37 281.6 41.9 399 48-499 1-412 (421)
3 1s3e_A Amine oxidase [flavin-c 100.0 4.7E-33 1.6E-37 291.0 32.6 426 46-500 3-464 (520)
4 3nks_A Protoporphyrinogen oxid 100.0 1E-32 3.5E-37 285.8 29.0 411 47-490 2-474 (477)
5 2ivd_A PPO, PPOX, protoporphyr 100.0 2.7E-32 9.4E-37 282.6 30.0 410 45-492 14-475 (478)
6 2vvm_A Monoamine oxidase N; FA 100.0 2.4E-32 8.4E-37 284.1 29.6 415 46-492 38-487 (495)
7 3i6d_A Protoporphyrinogen oxid 100.0 1E-32 3.5E-37 285.3 26.1 415 46-490 4-468 (470)
8 2yg5_A Putrescine oxidase; oxi 100.0 4.3E-32 1.5E-36 279.2 25.3 419 46-491 4-452 (453)
9 3lov_A Protoporphyrinogen oxid 100.0 9.5E-32 3.3E-36 278.3 27.4 419 46-493 3-468 (475)
10 4gde_A UDP-galactopyranose mut 100.0 4.3E-32 1.5E-36 283.8 24.2 414 44-488 7-477 (513)
11 1sez_A Protoporphyrinogen oxid 100.0 2.1E-31 7.1E-36 277.8 29.2 418 46-492 12-495 (504)
12 4dgk_A Phytoene dehydrogenase; 100.0 7.2E-31 2.5E-35 273.6 28.8 423 47-494 1-495 (501)
13 1b37_A Protein (polyamine oxid 100.0 1.6E-29 5.5E-34 261.0 23.8 413 46-492 3-460 (472)
14 4dsg_A UDP-galactopyranose mut 100.0 2.1E-29 7.3E-34 259.6 22.9 409 45-487 7-452 (484)
15 3k7m_X 6-hydroxy-L-nicotine ox 100.0 1.6E-27 5.4E-32 243.5 32.2 393 47-490 1-426 (431)
16 2iid_A L-amino-acid oxidase; f 100.0 4E-27 1.4E-31 245.0 25.7 421 45-493 31-487 (498)
17 2jae_A L-amino acid oxidase; o 99.9 1.3E-27 4.5E-32 248.0 17.6 235 242-491 231-486 (489)
18 1rsg_A FMS1 protein; FAD bindi 99.9 9.4E-26 3.2E-30 235.3 26.0 403 45-491 6-508 (516)
19 4gut_A Lysine-specific histone 99.9 3.1E-26 1.1E-30 246.0 21.5 399 45-488 334-775 (776)
20 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 1.5E-25 5E-30 221.5 23.7 228 246-490 108-342 (342)
21 2b9w_A Putative aminooxidase; 99.9 4.1E-25 1.4E-29 225.0 25.7 400 45-487 4-423 (424)
22 2xag_A Lysine-specific histone 99.9 1.2E-23 4.1E-28 227.2 33.8 232 245-495 567-834 (852)
23 2z3y_A Lysine-specific histone 99.9 2.7E-24 9.4E-29 229.6 28.5 229 245-492 396-660 (662)
24 3ayj_A Pro-enzyme of L-phenyla 99.9 3.6E-25 1.2E-29 232.4 14.6 258 241-503 338-692 (721)
25 1yvv_A Amine oxidase, flavin-c 99.9 2.9E-21 9.8E-26 190.2 25.2 208 265-492 119-329 (336)
26 2bcg_G Secretory pathway GDP d 99.9 1.1E-19 3.6E-24 185.9 35.4 380 46-487 10-438 (453)
27 1d5t_A Guanine nucleotide diss 99.8 4.4E-18 1.5E-22 172.8 34.8 249 46-309 5-290 (433)
28 3p1w_A Rabgdi protein; GDI RAB 99.8 1.4E-19 4.9E-24 182.7 22.6 257 46-308 19-313 (475)
29 1v0j_A UDP-galactopyranose mut 99.8 3.7E-21 1.3E-25 193.3 10.9 247 47-346 7-273 (399)
30 2bi7_A UDP-galactopyranose mut 99.8 2.4E-20 8.2E-25 186.2 14.6 241 47-344 3-260 (384)
31 1i8t_A UDP-galactopyranose mut 99.8 7.5E-20 2.6E-24 181.6 16.7 245 47-347 1-260 (367)
32 3hdq_A UDP-galactopyranose mut 99.8 1E-18 3.5E-23 173.2 17.7 345 45-489 27-390 (397)
33 1vg0_A RAB proteins geranylger 99.7 1E-12 3.6E-17 136.4 38.4 148 152-304 282-432 (650)
34 3nyc_A D-arginine dehydrogenas 99.6 4.5E-14 1.5E-18 141.2 24.3 58 251-311 154-211 (381)
35 3dme_A Conserved exported prot 99.6 2.6E-14 8.9E-19 142.1 22.1 207 251-486 150-367 (369)
36 3kkj_A Amine oxidase, flavin-c 99.6 1.5E-13 5E-18 131.3 23.7 86 398-492 244-329 (336)
37 1ryi_A Glycine oxidase; flavop 99.6 1.9E-13 6.6E-18 136.6 25.5 196 251-488 164-361 (382)
38 3dje_A Fructosyl amine: oxygen 99.6 1E-13 3.4E-18 141.4 22.2 58 251-310 161-222 (438)
39 2gag_B Heterotetrameric sarcos 99.6 2E-12 7E-17 130.2 30.5 199 252-489 175-375 (405)
40 1y56_B Sarcosine oxidase; dehy 99.6 7.4E-13 2.5E-17 132.4 26.7 203 251-489 149-355 (382)
41 3ps9_A TRNA 5-methylaminomethy 99.6 3.5E-13 1.2E-17 144.7 25.8 56 251-309 417-473 (676)
42 3oz2_A Digeranylgeranylglycero 99.6 7.2E-13 2.5E-17 132.9 24.8 41 45-85 2-42 (397)
43 3pvc_A TRNA 5-methylaminomethy 99.5 7E-13 2.4E-17 142.5 25.4 56 251-309 412-469 (689)
44 3cgv_A Geranylgeranyl reductas 99.5 2.3E-12 7.8E-17 129.5 27.3 57 252-310 103-163 (397)
45 2oln_A NIKD protein; flavoprot 99.5 1.2E-11 3.9E-16 124.3 32.1 58 251-311 153-210 (397)
46 2gf3_A MSOX, monomeric sarcosi 99.5 5.2E-12 1.8E-16 126.5 27.3 203 251-489 150-364 (389)
47 3axb_A Putative oxidoreductase 99.5 2.2E-12 7.6E-17 131.8 24.4 200 251-488 181-417 (448)
48 3nix_A Flavoprotein/dehydrogen 99.5 3.3E-12 1.1E-16 129.4 24.7 58 252-310 107-167 (421)
49 2e1m_A L-glutamate oxidase; L- 99.5 1.5E-13 5E-18 135.1 13.5 67 45-111 42-129 (376)
50 3da1_A Glycerol-3-phosphate de 99.5 5.1E-12 1.7E-16 132.1 23.3 223 251-503 170-407 (561)
51 3rp8_A Flavoprotein monooxygen 99.4 5.8E-12 2E-16 127.0 21.7 64 42-110 18-81 (407)
52 2uzz_A N-methyl-L-tryptophan o 99.4 2.2E-11 7.6E-16 121.1 21.5 56 252-310 150-205 (372)
53 2i0z_A NAD(FAD)-utilizing dehy 99.4 2.8E-12 9.7E-17 130.7 15.0 58 250-309 133-191 (447)
54 3nlc_A Uncharacterized protein 99.4 1.4E-10 4.9E-15 119.6 27.5 57 252-310 221-278 (549)
55 3i3l_A Alkylhalidase CMLS; fla 99.4 3.4E-11 1.2E-15 126.2 23.1 57 252-310 129-189 (591)
56 3ihg_A RDME; flavoenzyme, anth 99.4 9.5E-11 3.2E-15 122.4 25.6 61 45-110 3-63 (535)
57 2rgh_A Alpha-glycerophosphate 99.4 3.8E-10 1.3E-14 118.1 29.1 59 251-311 188-252 (571)
58 1pj5_A N,N-dimethylglycine oxi 99.3 3.4E-10 1.2E-14 124.3 28.3 58 251-310 151-208 (830)
59 3fmw_A Oxygenase; mithramycin, 99.3 1.5E-10 5.2E-15 121.0 23.6 59 252-311 149-209 (570)
60 3v76_A Flavoprotein; structura 99.3 1.3E-11 4.4E-16 123.9 13.9 56 251-309 132-187 (417)
61 2qa1_A PGAE, polyketide oxygen 99.3 8.1E-10 2.8E-14 113.9 26.2 65 41-110 5-69 (500)
62 2gmh_A Electron transfer flavo 99.3 7.8E-10 2.7E-14 116.1 26.3 58 252-310 145-218 (584)
63 3atr_A Conserved archaeal prot 99.3 3.9E-10 1.3E-14 115.1 23.4 57 252-310 101-163 (453)
64 3e1t_A Halogenase; flavoprotei 99.3 1.8E-10 6.2E-15 119.4 21.0 57 252-310 112-173 (512)
65 1k0i_A P-hydroxybenzoate hydro 99.3 1E-09 3.4E-14 110.0 25.5 60 252-311 104-165 (394)
66 2qa2_A CABE, polyketide oxygen 99.3 1E-09 3.5E-14 113.1 25.4 62 44-110 9-70 (499)
67 2qcu_A Aerobic glycerol-3-phos 99.2 9.8E-10 3.4E-14 113.5 23.9 58 251-311 149-212 (501)
68 1y0p_A Fumarate reductase flav 99.2 2.6E-10 9E-15 119.8 19.6 60 250-310 254-318 (571)
69 4at0_A 3-ketosteroid-delta4-5a 99.2 1.3E-10 4.5E-15 120.4 16.7 57 252-309 203-264 (510)
70 1qo8_A Flavocytochrome C3 fuma 99.2 3.7E-10 1.3E-14 118.5 18.5 60 250-310 249-313 (566)
71 3c4n_A Uncharacterized protein 99.2 2.2E-10 7.5E-15 115.2 15.8 57 251-310 172-237 (405)
72 2dkh_A 3-hydroxybenzoate hydro 99.2 1.2E-08 4E-13 108.5 29.7 60 46-110 31-91 (639)
73 3g3e_A D-amino-acid oxidase; F 99.2 9.6E-11 3.3E-15 115.5 12.4 190 251-492 142-336 (351)
74 2gqf_A Hypothetical protein HI 99.2 2.4E-10 8.3E-15 114.3 13.5 57 250-309 108-168 (401)
75 1c0p_A D-amino acid oxidase; a 99.1 6.4E-10 2.2E-14 110.1 15.2 39 46-84 5-43 (363)
76 3k30_A Histamine dehydrogenase 99.1 1.7E-10 5.7E-15 123.9 9.6 74 12-85 354-429 (690)
77 4hb9_A Similarities with proba 99.1 2.3E-09 7.9E-14 107.9 16.8 60 48-110 2-61 (412)
78 1rp0_A ARA6, thiazole biosynth 99.0 2.1E-09 7E-14 102.4 13.9 39 46-84 38-77 (284)
79 3lxd_A FAD-dependent pyridine 99.0 1.1E-09 3.6E-14 110.6 12.4 63 250-314 193-256 (415)
80 4a9w_A Monooxygenase; baeyer-v 99.0 1.1E-09 3.6E-14 108.0 10.7 40 46-85 2-41 (357)
81 1d4d_A Flavocytochrome C fumar 99.0 1.1E-08 3.8E-13 107.2 18.7 59 250-309 254-317 (572)
82 3alj_A 2-methyl-3-hydroxypyrid 99.0 3.7E-09 1.3E-13 105.2 14.4 54 252-311 108-162 (379)
83 3o0h_A Glutathione reductase; 99.0 1.7E-09 5.8E-14 111.3 11.5 59 250-311 231-290 (484)
84 3fg2_P Putative rubredoxin red 99.0 1.1E-08 3.8E-13 102.7 16.9 64 250-315 183-247 (404)
85 2x3n_A Probable FAD-dependent 99.0 3E-09 1E-13 106.7 12.5 58 252-311 108-168 (399)
86 4fk1_A Putative thioredoxin re 99.0 3.2E-09 1.1E-13 102.2 11.6 41 43-84 2-42 (304)
87 2wdq_A Succinate dehydrogenase 98.9 2.2E-08 7.5E-13 105.1 18.0 60 250-310 142-207 (588)
88 4ap3_A Steroid monooxygenase; 98.9 3.3E-09 1.1E-13 110.4 11.6 40 45-84 19-58 (549)
89 2bs2_A Quinol-fumarate reducta 98.9 2E-08 6.8E-13 106.3 17.6 59 250-310 157-221 (660)
90 1mo9_A ORF3; nucleotide bindin 98.9 2E-08 6.7E-13 104.3 16.9 62 250-312 254-319 (523)
91 1pn0_A Phenol 2-monooxygenase; 98.9 3.4E-07 1.1E-11 97.5 26.6 60 46-110 7-71 (665)
92 2vou_A 2,6-dihydroxypyridine h 98.9 1.2E-08 4.3E-13 102.1 14.8 63 45-111 3-65 (397)
93 4dna_A Probable glutathione re 98.9 3.9E-09 1.3E-13 108.0 10.7 60 250-311 210-270 (463)
94 2cul_A Glucose-inhibited divis 98.9 1.6E-08 5.5E-13 93.1 13.7 55 252-309 69-125 (232)
95 2bry_A NEDD9 interacting prote 98.9 8.1E-09 2.8E-13 106.3 12.8 41 44-84 89-129 (497)
96 3oc4_A Oxidoreductase, pyridin 98.9 5.3E-09 1.8E-13 106.7 11.2 60 249-311 187-246 (452)
97 1chu_A Protein (L-aspartate ox 98.9 8.4E-09 2.9E-13 107.2 12.7 40 45-85 6-45 (540)
98 3c96_A Flavin-containing monoo 98.9 2E-08 6.9E-13 101.0 15.2 60 46-110 3-63 (410)
99 3lzw_A Ferredoxin--NADP reduct 98.9 6.8E-09 2.3E-13 101.1 11.0 39 46-84 6-44 (332)
100 3uox_A Otemo; baeyer-villiger 98.9 7.8E-09 2.7E-13 107.4 11.9 40 45-84 7-46 (545)
101 3jsk_A Cypbp37 protein; octame 98.9 2.7E-08 9.3E-13 95.6 14.4 39 46-84 78-118 (344)
102 2h88_A Succinate dehydrogenase 98.9 4.5E-08 1.6E-12 102.8 17.0 59 250-310 154-218 (621)
103 2e5v_A L-aspartate oxidase; ar 98.8 5.5E-08 1.9E-12 99.4 16.9 57 251-310 119-177 (472)
104 3itj_A Thioredoxin reductase 1 98.8 1.6E-08 5.5E-13 98.7 12.3 37 44-80 19-55 (338)
105 2weu_A Tryptophan 5-halogenase 98.8 4.1E-08 1.4E-12 101.8 15.6 58 251-310 173-231 (511)
106 2xdo_A TETX2 protein; tetracyc 98.8 2.7E-08 9.4E-13 99.6 13.9 64 45-110 24-87 (398)
107 2aqj_A Tryptophan halogenase, 98.8 2E-08 6.7E-13 104.8 13.2 58 251-310 165-223 (538)
108 3ab1_A Ferredoxin--NADP reduct 98.8 2.4E-08 8.2E-13 98.6 13.0 39 46-84 13-51 (360)
109 3gwf_A Cyclohexanone monooxyge 98.8 7.5E-09 2.6E-13 107.4 9.5 39 46-84 7-46 (540)
110 3ef6_A Toluene 1,2-dioxygenase 98.8 1.2E-08 3.9E-13 102.7 10.5 61 251-314 185-246 (410)
111 2zbw_A Thioredoxin reductase; 98.8 2.5E-08 8.6E-13 97.3 12.7 39 46-84 4-42 (335)
112 3f8d_A Thioredoxin reductase ( 98.8 2.3E-08 7.9E-13 96.9 12.2 37 46-84 14-50 (323)
113 1kf6_A Fumarate reductase flav 98.8 5.3E-08 1.8E-12 102.4 15.7 59 251-311 134-199 (602)
114 2pyx_A Tryptophan halogenase; 98.8 4.7E-08 1.6E-12 101.6 14.8 57 252-310 176-234 (526)
115 1xdi_A RV3303C-LPDA; reductase 98.8 9.1E-09 3.1E-13 106.3 9.0 61 250-313 222-283 (499)
116 1w4x_A Phenylacetone monooxyge 98.8 2.3E-08 8E-13 104.2 12.2 40 45-84 14-53 (542)
117 2gjc_A Thiazole biosynthetic e 98.8 7.3E-08 2.5E-12 92.1 14.5 39 46-84 64-104 (326)
118 2e4g_A Tryptophan halogenase; 98.8 3.4E-08 1.2E-12 103.1 13.3 57 252-310 195-253 (550)
119 2gv8_A Monooxygenase; FMO, FAD 98.8 5.2E-08 1.8E-12 99.2 14.2 40 46-85 5-46 (447)
120 2cdu_A NADPH oxidase; flavoenz 98.8 5.3E-08 1.8E-12 99.2 13.6 64 249-314 189-252 (452)
121 3ics_A Coenzyme A-disulfide re 98.8 3.7E-08 1.3E-12 103.9 12.5 61 250-314 227-287 (588)
122 3d1c_A Flavin-containing putat 98.8 6.4E-08 2.2E-12 95.8 13.5 38 46-84 3-41 (369)
123 3iwa_A FAD-dependent pyridine 98.8 1E-07 3.5E-12 97.7 15.3 65 248-314 199-263 (472)
124 1zk7_A HGII, reductase, mercur 98.8 3.9E-08 1.3E-12 100.7 12.1 59 250-311 215-273 (467)
125 3dk9_A Grase, GR, glutathione 98.7 4.4E-08 1.5E-12 100.6 12.4 60 250-310 227-294 (478)
126 2bc0_A NADH oxidase; flavoprot 98.7 8E-08 2.7E-12 98.9 13.7 63 249-314 234-296 (490)
127 1q1r_A Putidaredoxin reductase 98.7 5.7E-08 1.9E-12 98.3 12.3 64 250-315 190-256 (431)
128 2yqu_A 2-oxoglutarate dehydrog 98.7 5.6E-08 1.9E-12 99.1 12.1 59 250-311 207-266 (455)
129 3ces_A MNMG, tRNA uridine 5-ca 98.7 1.3E-07 4.3E-12 98.5 14.6 55 252-309 125-181 (651)
130 1ges_A Glutathione reductase; 98.7 1.1E-07 3.7E-12 96.8 13.6 59 250-310 207-266 (450)
131 2e1m_C L-glutamate oxidase; L- 98.7 4.4E-09 1.5E-13 92.2 2.4 99 393-495 49-157 (181)
132 3s5w_A L-ornithine 5-monooxyge 98.7 1.2E-07 4E-12 97.1 13.4 39 46-84 29-72 (463)
133 2ywl_A Thioredoxin reductase r 98.7 2.5E-07 8.6E-12 81.4 13.6 53 253-309 58-110 (180)
134 2zxi_A TRNA uridine 5-carboxym 98.7 6.1E-08 2.1E-12 100.5 11.0 57 252-311 124-182 (637)
135 2r0c_A REBC; flavin adenine di 98.7 1.9E-07 6.7E-12 97.3 14.8 60 46-110 25-84 (549)
136 1vdc_A NTR, NADPH dependent th 98.7 6.4E-08 2.2E-12 94.3 10.5 33 46-78 7-39 (333)
137 4a5l_A Thioredoxin reductase; 98.7 1.4E-07 4.7E-12 91.1 12.6 35 46-80 3-37 (314)
138 2q0l_A TRXR, thioredoxin reduc 98.7 2.3E-07 7.8E-12 89.4 13.9 37 47-84 1-38 (311)
139 3gyx_A Adenylylsulfate reducta 98.7 2.9E-07 1E-11 97.3 15.7 58 251-309 166-233 (662)
140 2r9z_A Glutathione amide reduc 98.7 3.2E-07 1.1E-11 93.6 15.6 58 250-310 206-265 (463)
141 2v3a_A Rubredoxin reductase; a 98.7 1.8E-07 6.1E-12 93.1 13.3 62 250-314 186-248 (384)
142 3urh_A Dihydrolipoyl dehydroge 98.7 2.5E-07 8.7E-12 95.2 14.6 42 44-85 22-63 (491)
143 3cgb_A Pyridine nucleotide-dis 98.6 1.5E-07 5.1E-12 96.6 12.4 62 250-314 226-287 (480)
144 1jnr_A Adenylylsulfate reducta 98.6 8.5E-07 2.9E-11 94.1 18.3 58 252-310 152-219 (643)
145 3fpz_A Thiazole biosynthetic e 98.6 2.8E-08 9.6E-13 96.6 6.4 66 45-110 63-132 (326)
146 2xve_A Flavin-containing monoo 98.6 3.4E-07 1.2E-11 93.4 14.6 38 48-85 3-46 (464)
147 1onf_A GR, grase, glutathione 98.6 1.2E-07 4.3E-12 97.7 11.4 60 250-311 216-277 (500)
148 3kd9_A Coenzyme A disulfide re 98.6 2E-07 6.8E-12 94.9 12.8 62 249-314 188-249 (449)
149 2q7v_A Thioredoxin reductase; 98.6 3E-07 1E-11 89.2 13.5 38 46-84 7-44 (325)
150 1trb_A Thioredoxin reductase; 98.6 2.2E-07 7.5E-12 89.9 12.2 38 46-84 4-41 (320)
151 3ntd_A FAD-dependent pyridine 98.6 1.8E-07 6.3E-12 98.1 12.3 64 250-314 191-272 (565)
152 3h8l_A NADH oxidase; membrane 98.6 1.2E-07 4.1E-12 95.3 10.4 54 250-309 217-270 (409)
153 3lad_A Dihydrolipoamide dehydr 98.6 3.9E-07 1.3E-11 93.5 14.2 44 46-89 2-45 (476)
154 3h28_A Sulfide-quinone reducta 98.6 6.1E-08 2.1E-12 98.1 7.9 38 47-84 2-41 (430)
155 3fbs_A Oxidoreductase; structu 98.6 3.1E-07 1.1E-11 87.7 12.5 34 47-80 2-35 (297)
156 1dxl_A Dihydrolipoamide dehydr 98.6 5.8E-07 2E-11 92.0 14.7 41 45-85 4-44 (470)
157 3cp8_A TRNA uridine 5-carboxym 98.6 5.1E-07 1.7E-11 94.0 14.0 56 252-310 118-175 (641)
158 3qvp_A Glucose oxidase; oxidor 98.6 3.6E-07 1.2E-11 95.1 12.8 56 262-317 238-301 (583)
159 2qae_A Lipoamide, dihydrolipoy 98.5 8.3E-07 2.8E-11 90.8 14.8 38 47-84 2-39 (468)
160 1nhp_A NADH peroxidase; oxidor 98.5 9.4E-07 3.2E-11 89.8 14.4 62 250-314 190-251 (447)
161 4g6h_A Rotenone-insensitive NA 98.5 3.7E-07 1.3E-11 93.8 10.9 59 247-308 268-331 (502)
162 1v59_A Dihydrolipoamide dehydr 98.5 5.6E-07 1.9E-11 92.3 12.2 38 47-84 5-42 (478)
163 1fl2_A Alkyl hydroperoxide red 98.5 8.7E-07 3E-11 85.2 12.5 36 47-84 1-36 (310)
164 1ojt_A Surface protein; redox- 98.5 1.1E-06 3.8E-11 90.1 14.0 38 47-84 6-43 (482)
165 3klj_A NAD(FAD)-dependent dehy 98.5 4.8E-07 1.6E-11 89.8 10.5 39 44-82 6-44 (385)
166 2a8x_A Dihydrolipoyl dehydroge 98.5 1E-06 3.6E-11 89.9 13.1 37 47-84 3-39 (464)
167 4gcm_A TRXR, thioredoxin reduc 98.5 1.2E-07 4E-12 91.6 5.4 41 44-85 3-43 (312)
168 1n4w_A CHOD, cholesterol oxida 98.5 2.1E-06 7.2E-11 88.5 15.0 64 254-317 224-296 (504)
169 1hyu_A AHPF, alkyl hydroperoxi 98.5 9.3E-07 3.2E-11 91.5 12.4 38 45-84 210-247 (521)
170 4b1b_A TRXR, thioredoxin reduc 98.5 1.7E-07 5.9E-12 96.8 6.8 63 250-314 262-324 (542)
171 3hyw_A Sulfide-quinone reducta 98.4 2.4E-07 8.1E-12 93.6 7.4 36 47-82 2-39 (430)
172 1ebd_A E3BD, dihydrolipoamide 98.4 2.6E-06 8.9E-11 86.7 14.5 37 47-84 3-39 (455)
173 3t37_A Probable dehydrogenase; 98.4 7.7E-07 2.6E-11 92.5 10.4 53 263-317 223-279 (526)
174 1ps9_A 2,4-dienoyl-COA reducta 98.4 2.8E-07 9.4E-12 98.6 7.1 74 10-86 339-412 (671)
175 3sx6_A Sulfide-quinone reducta 98.4 2E-06 6.8E-11 87.1 12.2 36 47-82 4-42 (437)
176 1o94_A Tmadh, trimethylamine d 98.4 3.8E-07 1.3E-11 98.3 7.2 75 12-86 351-428 (729)
177 3vrd_B FCCB subunit, flavocyto 98.4 6.2E-07 2.1E-11 89.8 7.9 37 47-83 2-40 (401)
178 1coy_A Cholesterol oxidase; ox 98.3 1.4E-05 4.7E-10 82.4 18.1 63 254-317 229-301 (507)
179 4eqs_A Coenzyme A disulfide re 98.3 3.8E-06 1.3E-10 84.9 13.5 59 250-314 187-245 (437)
180 3fim_B ARYL-alcohol oxidase; A 98.3 2E-06 7E-11 89.2 11.0 56 262-317 219-284 (566)
181 4b63_A L-ornithine N5 monooxyg 98.3 5.2E-06 1.8E-10 85.4 13.1 41 44-84 36-76 (501)
182 2vdc_G Glutamate synthase [NAD 98.2 8E-07 2.7E-11 90.1 5.8 45 45-89 120-164 (456)
183 3r9u_A Thioredoxin reductase; 98.2 7.5E-07 2.6E-11 85.8 4.4 40 45-85 2-42 (315)
184 3qfa_A Thioredoxin reductase 1 98.2 1.3E-06 4.4E-11 90.4 6.4 36 45-80 30-65 (519)
185 3ihm_A Styrene monooxygenase A 98.2 1.1E-06 3.8E-11 88.7 4.7 36 45-80 20-55 (430)
186 3l8k_A Dihydrolipoyl dehydroge 98.1 9.9E-07 3.4E-11 90.1 4.2 39 47-85 4-42 (466)
187 3cty_A Thioredoxin reductase; 98.1 1.7E-06 5.8E-11 83.6 4.9 38 47-85 16-53 (319)
188 1zmd_A Dihydrolipoyl dehydroge 98.1 1.4E-06 4.7E-11 89.3 4.2 41 45-85 4-44 (474)
189 3ic9_A Dihydrolipoamide dehydr 98.1 1.4E-06 4.6E-11 89.7 3.6 39 46-85 7-45 (492)
190 3dgz_A Thioredoxin reductase 2 98.1 2.9E-06 9.9E-11 87.2 5.5 41 45-85 4-52 (488)
191 2a87_A TRXR, TR, thioredoxin r 98.1 2.6E-06 8.9E-11 82.9 4.9 40 45-85 12-51 (335)
192 3dgh_A TRXR-1, thioredoxin red 98.0 3.7E-06 1.2E-10 86.3 5.9 61 250-311 226-291 (483)
193 3c4a_A Probable tryptophan hyd 98.0 3.6E-06 1.2E-10 83.5 5.3 35 48-82 1-37 (381)
194 3pl8_A Pyranose 2-oxidase; sub 98.0 4E-06 1.4E-10 88.4 5.7 40 46-85 45-84 (623)
195 2hqm_A GR, grase, glutathione 98.0 3.2E-06 1.1E-10 86.7 4.4 59 250-309 225-285 (479)
196 2eq6_A Pyruvate dehydrogenase 98.0 3.3E-06 1.1E-10 86.1 4.1 59 250-310 209-272 (464)
197 1fec_A Trypanothione reductase 98.0 4.4E-06 1.5E-10 85.8 4.9 60 250-311 230-290 (490)
198 1lvl_A Dihydrolipoamide dehydr 98.0 4E-06 1.4E-10 85.4 4.3 39 46-85 4-42 (458)
199 3g5s_A Methylenetetrahydrofola 98.0 7.5E-06 2.6E-10 79.2 5.9 36 48-83 2-37 (443)
200 2eq6_A Pyruvate dehydrogenase 97.9 0.00011 3.6E-09 74.9 14.0 36 47-82 169-204 (464)
201 1lqt_A FPRA; NADP+ derivative, 97.8 8.8E-06 3E-10 82.5 4.5 41 46-86 2-49 (456)
202 1ebd_A E3BD, dihydrolipoamide 97.8 0.00016 5.4E-09 73.4 13.6 35 47-81 170-204 (455)
203 2wpf_A Trypanothione reductase 97.8 6.4E-06 2.2E-10 84.7 3.2 60 250-311 234-294 (495)
204 1v59_A Dihydrolipoamide dehydr 97.8 0.00015 5.3E-09 74.1 13.5 35 47-81 183-217 (478)
205 1cjc_A Protein (adrenodoxin re 97.8 1.5E-05 5.3E-10 80.8 5.4 43 46-88 5-49 (460)
206 1y56_A Hypothetical protein PH 97.8 7.5E-06 2.6E-10 84.1 3.0 39 47-86 108-146 (493)
207 1gte_A Dihydropyrimidine dehyd 97.8 1.3E-05 4.4E-10 89.6 5.1 40 46-85 186-226 (1025)
208 2hqm_A GR, grase, glutathione 97.8 0.00016 5.4E-09 74.0 12.9 37 46-82 184-220 (479)
209 2gag_A Heterotetrameric sarcos 97.8 1.4E-05 4.9E-10 88.6 4.8 41 47-87 128-168 (965)
210 2gqw_A Ferredoxin reductase; f 97.7 2.3E-05 8E-10 78.4 5.3 58 250-314 186-244 (408)
211 1zmd_A Dihydrolipoyl dehydroge 97.7 0.00032 1.1E-08 71.6 13.9 35 47-81 178-212 (474)
212 2a8x_A Dihydrolipoyl dehydroge 97.7 0.00032 1.1E-08 71.3 13.8 35 47-81 171-205 (464)
213 2gqw_A Ferredoxin reductase; f 97.7 0.00014 4.9E-09 72.6 11.0 36 47-82 145-180 (408)
214 1ojt_A Surface protein; redox- 97.7 0.00018 6.3E-09 73.5 11.8 35 47-81 185-219 (482)
215 1kdg_A CDH, cellobiose dehydro 97.7 2.5E-05 8.5E-10 81.4 5.3 61 255-317 199-269 (546)
216 2wpf_A Trypanothione reductase 97.7 0.00024 8.1E-09 72.9 12.6 36 47-82 191-229 (495)
217 1fec_A Trypanothione reductase 97.7 0.00023 7.7E-09 73.0 12.2 36 47-82 187-225 (490)
218 1trb_A Thioredoxin reductase; 97.7 0.00034 1.2E-08 67.1 12.8 34 47-80 145-178 (320)
219 2x8g_A Thioredoxin glutathione 97.7 2.7E-05 9.4E-10 82.1 5.2 35 45-79 105-139 (598)
220 1lvl_A Dihydrolipoamide dehydr 97.7 0.00019 6.5E-09 72.9 10.9 35 47-81 171-205 (458)
221 2qae_A Lipoamide, dihydrolipoy 97.6 0.00053 1.8E-08 69.8 13.7 36 46-81 173-208 (468)
222 1m6i_A Programmed cell death p 97.6 3.5E-05 1.2E-09 79.1 4.8 62 250-314 225-287 (493)
223 1dxl_A Dihydrolipoamide dehydr 97.6 0.00042 1.5E-08 70.6 12.3 35 47-81 177-211 (470)
224 3urh_A Dihydrolipoyl dehydroge 97.6 0.00065 2.2E-08 69.6 13.7 36 46-81 197-232 (491)
225 3q9t_A Choline dehydrogenase a 97.6 4.3E-05 1.5E-09 79.5 4.6 56 262-317 217-278 (577)
226 3lad_A Dihydrolipoamide dehydr 97.5 0.00087 3E-08 68.4 13.9 36 46-81 179-214 (476)
227 3ic9_A Dihydrolipoamide dehydr 97.5 0.00088 3E-08 68.6 13.9 36 46-81 173-208 (492)
228 1ju2_A HydroxynitrIle lyase; f 97.5 2.9E-05 1E-09 80.4 2.8 61 257-317 200-269 (536)
229 3s5w_A L-ornithine 5-monooxyge 97.5 0.0023 7.9E-08 64.9 16.8 36 46-81 226-263 (463)
230 1xhc_A NADH oxidase /nitrite r 97.5 0.00045 1.5E-08 67.8 10.7 34 48-81 144-177 (367)
231 1m6i_A Programmed cell death p 97.5 0.00092 3.1E-08 68.5 13.3 35 47-81 180-218 (493)
232 1xhc_A NADH oxidase /nitrite r 97.5 6.7E-05 2.3E-09 73.8 4.6 59 249-314 181-239 (367)
233 3ab1_A Ferredoxin--NADP reduct 97.4 0.00057 1.9E-08 66.9 10.6 34 47-80 163-196 (360)
234 1gpe_A Protein (glucose oxidas 97.4 0.00016 5.4E-09 75.7 5.8 56 262-317 242-305 (587)
235 2zbw_A Thioredoxin reductase; 97.3 0.0022 7.7E-08 61.8 13.4 34 47-80 152-185 (335)
236 3dgh_A TRXR-1, thioredoxin red 97.3 0.0022 7.5E-08 65.5 13.4 34 46-79 186-219 (483)
237 2jbv_A Choline oxidase; alcoho 97.3 0.00017 5.9E-09 74.8 4.7 54 263-317 221-281 (546)
238 3dgz_A Thioredoxin reductase 2 97.2 0.004 1.4E-07 63.6 14.1 34 46-79 184-217 (488)
239 3uox_A Otemo; baeyer-villiger 97.1 0.0039 1.3E-07 64.5 13.2 36 46-81 184-219 (545)
240 3itj_A Thioredoxin reductase 1 97.1 0.0027 9.2E-08 61.2 11.3 34 46-79 172-205 (338)
241 3cty_A Thioredoxin reductase; 97.1 0.0033 1.1E-07 60.2 11.2 33 47-79 155-187 (319)
242 3qfa_A Thioredoxin reductase 1 97.0 0.0082 2.8E-07 61.8 14.2 33 47-79 210-242 (519)
243 3r9u_A Thioredoxin reductase; 96.8 0.0097 3.3E-07 56.6 11.7 34 47-80 147-180 (315)
244 3f8d_A Thioredoxin reductase ( 96.6 0.016 5.4E-07 55.2 11.7 35 46-80 153-187 (323)
245 2g1u_A Hypothetical protein TM 96.5 0.0032 1.1E-07 53.2 5.4 37 44-80 16-52 (155)
246 3fwz_A Inner membrane protein 96.4 0.0047 1.6E-07 51.1 6.1 36 45-80 5-40 (140)
247 1lss_A TRK system potassium up 96.3 0.0047 1.6E-07 50.9 5.2 33 47-79 4-36 (140)
248 3klj_A NAD(FAD)-dependent dehy 96.2 0.0045 1.5E-07 61.1 5.3 38 47-84 146-183 (385)
249 1nhp_A NADH peroxidase; oxidor 96.2 0.0059 2E-07 61.6 6.3 39 46-84 148-186 (447)
250 3llv_A Exopolyphosphatase-rela 96.1 0.0062 2.1E-07 50.4 5.2 34 47-80 6-39 (141)
251 3c85_A Putative glutathione-re 96.1 0.0061 2.1E-07 53.1 5.2 35 46-80 38-73 (183)
252 4gcm_A TRXR, thioredoxin reduc 96.0 0.0058 2E-07 58.3 5.0 36 47-82 145-180 (312)
253 1id1_A Putative potassium chan 96.0 0.0091 3.1E-07 50.2 5.6 34 46-79 2-35 (153)
254 3ic5_A Putative saccharopine d 95.9 0.0082 2.8E-07 47.7 4.8 33 47-79 5-38 (118)
255 1f0y_A HCDH, L-3-hydroxyacyl-C 95.7 0.012 4E-07 55.9 5.9 34 46-79 14-47 (302)
256 2yqu_A 2-oxoglutarate dehydrog 95.7 0.01 3.6E-07 59.9 5.7 58 47-110 167-224 (455)
257 2v3a_A Rubredoxin reductase; a 95.7 0.013 4.4E-07 57.8 6.1 38 47-84 145-182 (384)
258 1ps9_A 2,4-dienoyl-COA reducta 95.6 0.052 1.8E-06 57.7 11.1 49 257-310 579-629 (671)
259 3ado_A Lambda-crystallin; L-gu 95.6 0.011 3.9E-07 55.9 5.2 35 46-80 5-39 (319)
260 2e1m_B L-glutamate oxidase; L- 95.5 0.011 3.8E-07 47.8 4.1 112 294-424 4-117 (130)
261 3lk7_A UDP-N-acetylmuramoylala 95.5 0.014 4.6E-07 58.9 5.5 36 45-80 7-42 (451)
262 1ges_A Glutathione reductase; 95.4 0.017 5.7E-07 58.3 5.9 58 47-110 167-224 (450)
263 3k6j_A Protein F01G10.3, confi 95.4 0.026 8.8E-07 56.4 7.1 40 41-80 48-87 (460)
264 4a5l_A Thioredoxin reductase; 95.4 0.013 4.6E-07 55.6 5.0 35 47-81 152-186 (314)
265 2hmt_A YUAA protein; RCK, KTN, 95.3 0.016 5.6E-07 47.7 4.8 33 47-79 6-38 (144)
266 2bc0_A NADH oxidase; flavoprot 95.2 0.021 7.1E-07 58.3 6.0 39 46-84 193-231 (490)
267 3k96_A Glycerol-3-phosphate de 95.1 0.02 6.8E-07 55.5 5.3 38 42-79 24-61 (356)
268 2r9z_A Glutathione amide reduc 95.1 0.022 7.6E-07 57.6 5.9 58 47-110 166-223 (463)
269 1pzg_A LDH, lactate dehydrogen 95.1 0.024 8.2E-07 54.4 5.7 36 45-80 7-43 (331)
270 3i83_A 2-dehydropantoate 2-red 95.0 0.023 7.8E-07 54.4 5.4 33 47-79 2-34 (320)
271 1q1r_A Putidaredoxin reductase 95.0 0.031 1.1E-06 55.9 6.3 38 47-84 149-186 (431)
272 3cgb_A Pyridine nucleotide-dis 94.9 0.018 6.2E-07 58.6 4.6 59 46-110 185-243 (480)
273 3tl2_A Malate dehydrogenase; c 94.9 0.029 1E-06 53.2 5.7 37 43-79 4-41 (315)
274 3ef6_A Toluene 1,2-dioxygenase 94.9 0.029 1E-06 55.7 5.9 37 47-83 143-179 (410)
275 4e12_A Diketoreductase; oxidor 94.9 0.03 1E-06 52.5 5.6 33 47-79 4-36 (283)
276 2dpo_A L-gulonate 3-dehydrogen 94.8 0.028 9.4E-07 53.6 5.2 35 46-80 5-39 (319)
277 3l4b_C TRKA K+ channel protien 94.8 0.023 8E-07 50.9 4.5 33 48-80 1-33 (218)
278 2x5o_A UDP-N-acetylmuramoylala 94.8 0.021 7.2E-07 57.3 4.5 36 47-82 5-40 (439)
279 3d1c_A Flavin-containing putat 94.7 0.03 1E-06 54.5 5.4 35 47-81 166-200 (369)
280 3hn2_A 2-dehydropantoate 2-red 94.7 0.025 8.5E-07 53.9 4.6 32 48-79 3-34 (312)
281 3kd9_A Coenzyme A disulfide re 94.7 0.037 1.3E-06 55.7 6.1 38 47-84 148-185 (449)
282 4eqs_A Coenzyme A disulfide re 94.6 0.03 1E-06 56.1 5.2 58 47-110 147-204 (437)
283 2q0l_A TRXR, thioredoxin reduc 94.6 0.036 1.2E-06 52.5 5.5 35 47-81 143-177 (311)
284 1onf_A GR, grase, glutathione 94.5 0.033 1.1E-06 56.9 5.4 58 47-110 176-233 (500)
285 1lld_A L-lactate dehydrogenase 94.5 0.037 1.3E-06 52.9 5.4 34 46-79 6-41 (319)
286 3ghy_A Ketopantoate reductase 94.5 0.037 1.3E-06 53.3 5.3 33 47-79 3-35 (335)
287 3gwf_A Cyclohexanone monooxyge 94.4 0.033 1.1E-06 57.5 5.1 36 46-81 177-212 (540)
288 2ew2_A 2-dehydropantoate 2-red 94.4 0.038 1.3E-06 52.5 5.3 33 47-79 3-35 (316)
289 1zk7_A HGII, reductase, mercur 94.4 0.042 1.5E-06 55.6 5.8 57 47-110 176-232 (467)
290 3vtf_A UDP-glucose 6-dehydroge 94.4 0.043 1.5E-06 54.4 5.5 37 44-80 18-54 (444)
291 3gg2_A Sugar dehydrogenase, UD 94.3 0.041 1.4E-06 55.1 5.4 33 48-80 3-35 (450)
292 2y0c_A BCEC, UDP-glucose dehyd 94.3 0.041 1.4E-06 55.6 5.4 35 46-80 7-41 (478)
293 2hjr_A Malate dehydrogenase; m 94.3 0.049 1.7E-06 52.2 5.6 35 46-80 13-48 (328)
294 2qyt_A 2-dehydropantoate 2-red 94.3 0.027 9.4E-07 53.6 3.9 36 43-78 4-45 (317)
295 1fl2_A Alkyl hydroperoxide red 94.3 0.039 1.3E-06 52.2 5.0 35 47-81 144-178 (310)
296 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.041 1.4E-06 49.2 4.7 35 45-79 29-63 (223)
297 2raf_A Putative dinucleotide-b 94.2 0.056 1.9E-06 48.0 5.5 36 46-81 18-53 (209)
298 3g17_A Similar to 2-dehydropan 94.2 0.031 1.1E-06 52.7 4.0 33 47-79 2-34 (294)
299 3fg2_P Putative rubredoxin red 94.2 0.054 1.8E-06 53.7 6.0 38 47-84 142-179 (404)
300 3gvi_A Malate dehydrogenase; N 94.2 0.054 1.8E-06 51.6 5.6 37 44-80 4-41 (324)
301 2cdu_A NADPH oxidase; flavoenz 94.2 0.043 1.5E-06 55.3 5.2 58 47-110 149-207 (452)
302 2o3j_A UDP-glucose 6-dehydroge 94.2 0.04 1.4E-06 55.8 5.0 35 46-80 8-44 (481)
303 4ap3_A Steroid monooxygenase; 94.1 0.046 1.6E-06 56.5 5.4 36 46-81 190-225 (549)
304 3lxd_A FAD-dependent pyridine 94.1 0.058 2E-06 53.6 6.0 38 47-84 152-189 (415)
305 3doj_A AT3G25530, dehydrogenas 94.1 0.057 1.9E-06 51.3 5.6 36 45-80 19-54 (310)
306 2xve_A Flavin-containing monoo 94.1 0.043 1.5E-06 55.5 5.1 38 46-83 196-233 (464)
307 2uyy_A N-PAC protein; long-cha 94.1 0.062 2.1E-06 51.2 5.9 35 45-79 28-62 (316)
308 3g79_A NDP-N-acetyl-D-galactos 94.0 0.052 1.8E-06 54.6 5.4 36 46-81 17-54 (478)
309 1vdc_A NTR, NADPH dependent th 94.0 0.046 1.6E-06 52.3 4.9 36 46-81 158-193 (333)
310 4g65_A TRK system potassium up 94.0 0.023 7.8E-07 57.3 2.8 35 46-80 2-36 (461)
311 1ks9_A KPA reductase;, 2-dehyd 94.0 0.059 2E-06 50.5 5.5 33 48-80 1-33 (291)
312 1kyq_A Met8P, siroheme biosynt 94.0 0.034 1.1E-06 51.4 3.6 34 46-79 12-45 (274)
313 1zej_A HBD-9, 3-hydroxyacyl-CO 94.0 0.057 1.9E-06 50.6 5.2 34 46-80 11-44 (293)
314 3l8k_A Dihydrolipoyl dehydroge 93.9 0.065 2.2E-06 54.2 6.1 37 46-82 171-207 (466)
315 3ego_A Probable 2-dehydropanto 93.9 0.056 1.9E-06 51.3 5.2 32 47-79 2-33 (307)
316 4dio_A NAD(P) transhydrogenase 93.9 0.065 2.2E-06 52.3 5.6 35 46-80 189-223 (405)
317 3ntd_A FAD-dependent pyridine 93.9 0.055 1.9E-06 56.2 5.5 58 47-110 151-208 (565)
318 3dk9_A Grase, GR, glutathione 93.9 0.06 2E-06 54.7 5.7 58 47-110 187-244 (478)
319 2a87_A TRXR, TR, thioredoxin r 93.9 0.052 1.8E-06 52.1 5.0 35 47-81 155-189 (335)
320 1bg6_A N-(1-D-carboxylethyl)-L 93.9 0.059 2E-06 52.3 5.4 33 47-79 4-36 (359)
321 1zcj_A Peroxisomal bifunctiona 93.9 0.071 2.4E-06 53.7 6.1 35 46-80 36-70 (463)
322 3g0o_A 3-hydroxyisobutyrate de 93.8 0.064 2.2E-06 50.7 5.4 34 46-79 6-39 (303)
323 2q7v_A Thioredoxin reductase; 93.8 0.055 1.9E-06 51.6 5.0 35 47-81 152-186 (325)
324 3eag_A UDP-N-acetylmuramate:L- 93.8 0.06 2.1E-06 51.5 5.1 34 47-80 4-38 (326)
325 3l6d_A Putative oxidoreductase 93.7 0.09 3.1E-06 49.8 6.3 34 46-79 8-41 (306)
326 2i6t_A Ubiquitin-conjugating e 93.7 0.058 2E-06 50.9 4.8 37 44-80 11-49 (303)
327 3p2y_A Alanine dehydrogenase/p 93.7 0.052 1.8E-06 52.6 4.5 34 46-79 183-216 (381)
328 3ggo_A Prephenate dehydrogenas 93.7 0.087 3E-06 50.0 6.0 36 44-79 30-67 (314)
329 3mog_A Probable 3-hydroxybutyr 93.6 0.068 2.3E-06 54.0 5.5 35 46-80 4-38 (483)
330 3oc4_A Oxidoreductase, pyridin 93.6 0.071 2.4E-06 53.7 5.7 38 47-84 147-184 (452)
331 2ewd_A Lactate dehydrogenase,; 93.6 0.068 2.3E-06 50.9 5.2 34 47-80 4-38 (317)
332 2gv8_A Monooxygenase; FMO, FAD 93.6 0.059 2E-06 54.2 4.9 37 46-82 211-248 (447)
333 3hwr_A 2-dehydropantoate 2-red 93.5 0.075 2.6E-06 50.7 5.2 33 46-79 18-50 (318)
334 2v6b_A L-LDH, L-lactate dehydr 93.4 0.08 2.7E-06 50.1 5.2 32 48-79 1-34 (304)
335 1t2d_A LDH-P, L-lactate dehydr 93.4 0.095 3.2E-06 50.0 5.8 34 47-80 4-38 (322)
336 2vns_A Metalloreductase steap3 93.4 0.082 2.8E-06 47.2 5.0 34 46-79 27-60 (215)
337 1mo9_A ORF3; nucleotide bindin 93.3 0.083 2.8E-06 54.3 5.7 57 48-110 215-271 (523)
338 4b1b_A TRXR, thioredoxin reduc 93.3 0.08 2.7E-06 54.4 5.5 58 46-110 222-279 (542)
339 1y6j_A L-lactate dehydrogenase 93.3 0.09 3.1E-06 50.0 5.4 35 46-80 6-42 (318)
340 3pid_A UDP-glucose 6-dehydroge 93.2 0.082 2.8E-06 52.3 5.1 35 45-80 34-68 (432)
341 3qsg_A NAD-binding phosphogluc 93.2 0.073 2.5E-06 50.6 4.6 34 46-79 23-57 (312)
342 4dll_A 2-hydroxy-3-oxopropiona 93.2 0.088 3E-06 50.2 5.2 34 46-79 30-63 (320)
343 3pqe_A L-LDH, L-lactate dehydr 93.2 0.092 3.1E-06 50.0 5.2 35 45-79 3-39 (326)
344 2a9f_A Putative malic enzyme ( 93.1 0.094 3.2E-06 50.6 5.2 37 44-80 185-222 (398)
345 3p7m_A Malate dehydrogenase; p 93.1 0.11 3.8E-06 49.3 5.8 36 45-80 3-39 (321)
346 3ics_A Coenzyme A-disulfide re 93.1 0.097 3.3E-06 54.7 5.8 58 47-110 187-244 (588)
347 2x8g_A Thioredoxin glutathione 93.0 0.085 2.9E-06 55.2 5.3 33 47-79 286-318 (598)
348 2vdc_G Glutamate synthase [NAD 93.0 0.12 4E-06 52.0 6.1 36 46-81 263-299 (456)
349 1ur5_A Malate dehydrogenase; o 93.0 0.11 3.6E-06 49.3 5.5 32 48-79 3-35 (309)
350 1mv8_A GMD, GDP-mannose 6-dehy 93.0 0.078 2.7E-06 53.0 4.8 33 48-80 1-33 (436)
351 3qha_A Putative oxidoreductase 93.0 0.068 2.3E-06 50.4 4.0 34 47-80 15-48 (296)
352 1vl6_A Malate oxidoreductase; 92.9 0.1 3.4E-06 50.4 5.0 36 44-79 189-225 (388)
353 1hyu_A AHPF, alkyl hydroperoxi 92.9 0.08 2.7E-06 54.3 4.7 35 47-81 355-389 (521)
354 4huj_A Uncharacterized protein 92.9 0.064 2.2E-06 48.1 3.5 34 46-79 22-56 (220)
355 3dfu_A Uncharacterized protein 92.9 0.04 1.4E-06 49.5 2.1 35 45-79 4-38 (232)
356 4a7p_A UDP-glucose dehydrogena 92.9 0.11 3.9E-06 51.7 5.6 35 47-81 8-42 (446)
357 3dtt_A NADP oxidoreductase; st 92.8 0.11 3.9E-06 47.3 5.3 36 45-80 17-52 (245)
358 1xdi_A RV3303C-LPDA; reductase 92.8 0.1 3.5E-06 53.2 5.5 58 47-110 182-239 (499)
359 3l9w_A Glutathione-regulated p 92.8 0.1 3.4E-06 51.6 5.2 64 46-110 3-67 (413)
360 1z82_A Glycerol-3-phosphate de 92.8 0.11 3.7E-06 49.9 5.4 34 46-79 13-46 (335)
361 3pef_A 6-phosphogluconate dehy 92.8 0.11 3.7E-06 48.7 5.2 33 48-80 2-34 (287)
362 1guz_A Malate dehydrogenase; o 92.6 0.12 4.2E-06 48.9 5.3 33 48-80 1-35 (310)
363 3gpi_A NAD-dependent epimerase 92.6 0.13 4.4E-06 48.0 5.4 34 47-80 3-36 (286)
364 3c4a_A Probable tryptophan hyd 92.6 1.3 4.5E-05 43.0 13.0 47 251-310 98-144 (381)
365 3iwa_A FAD-dependent pyridine 92.6 0.12 4.2E-06 52.2 5.6 58 47-110 159-218 (472)
366 3c24_A Putative oxidoreductase 92.6 0.15 5.2E-06 47.7 5.8 33 47-79 11-44 (286)
367 1evy_A Glycerol-3-phosphate de 92.5 0.082 2.8E-06 51.5 3.9 31 49-79 17-47 (366)
368 4e21_A 6-phosphogluconate dehy 92.4 0.14 4.8E-06 49.5 5.4 34 46-79 21-54 (358)
369 3ldh_A Lactate dehydrogenase; 92.3 0.18 6.2E-06 47.9 5.9 34 46-79 20-55 (330)
370 2wtb_A MFP2, fatty acid multif 92.2 0.15 5.2E-06 54.3 5.9 34 47-80 312-345 (725)
371 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.057 2E-06 44.6 2.2 33 47-79 21-53 (144)
372 1x13_A NAD(P) transhydrogenase 92.2 0.15 5E-06 50.3 5.4 33 47-79 172-204 (401)
373 2h78_A Hibadh, 3-hydroxyisobut 92.1 0.13 4.4E-06 48.6 4.8 33 47-79 3-35 (302)
374 1jw9_B Molybdopterin biosynthe 92.1 0.13 4.5E-06 46.9 4.7 33 47-79 31-64 (249)
375 4dna_A Probable glutathione re 92.1 0.17 5.8E-06 51.0 5.9 59 46-110 169-227 (463)
376 3d0o_A L-LDH 1, L-lactate dehy 92.1 0.15 5E-06 48.5 5.1 35 45-79 4-40 (317)
377 1txg_A Glycerol-3-phosphate de 92.1 0.12 4.1E-06 49.5 4.6 31 48-78 1-31 (335)
378 3o0h_A Glutathione reductase; 92.0 0.16 5.5E-06 51.5 5.7 58 47-110 191-248 (484)
379 3pdu_A 3-hydroxyisobutyrate de 92.0 0.11 3.6E-06 48.8 4.0 33 48-80 2-34 (287)
380 1ldn_A L-lactate dehydrogenase 92.0 0.17 5.9E-06 48.0 5.4 34 46-79 5-40 (316)
381 4aj2_A L-lactate dehydrogenase 91.9 0.22 7.5E-06 47.4 6.0 36 44-79 16-53 (331)
382 1dlj_A UDP-glucose dehydrogena 91.9 0.12 4E-06 51.1 4.3 32 48-80 1-32 (402)
383 1l7d_A Nicotinamide nucleotide 91.9 0.18 6.2E-06 49.4 5.7 35 46-80 171-205 (384)
384 1nyt_A Shikimate 5-dehydrogena 91.9 0.21 7.1E-06 46.3 5.8 34 46-79 118-151 (271)
385 1jay_A Coenzyme F420H2:NADP+ o 91.8 0.16 5.5E-06 45.0 4.8 32 48-79 1-33 (212)
386 3k31_A Enoyl-(acyl-carrier-pro 91.8 0.22 7.4E-06 46.8 5.9 43 37-79 20-65 (296)
387 2izz_A Pyrroline-5-carboxylate 91.7 0.17 5.7E-06 48.3 5.1 35 46-80 21-59 (322)
388 3ius_A Uncharacterized conserv 91.7 0.13 4.5E-06 47.9 4.3 34 47-80 5-38 (286)
389 4ffl_A PYLC; amino acid, biosy 91.7 0.18 6.1E-06 49.0 5.4 35 47-81 1-35 (363)
390 1pjc_A Protein (L-alanine dehy 91.7 0.19 6.4E-06 48.8 5.4 34 47-80 167-200 (361)
391 4ezb_A Uncharacterized conserv 91.7 0.16 5.4E-06 48.4 4.8 34 47-80 24-58 (317)
392 1a5z_A L-lactate dehydrogenase 91.6 0.15 5.2E-06 48.5 4.7 32 48-79 1-34 (319)
393 2rcy_A Pyrroline carboxylate r 91.6 0.18 6.3E-06 46.3 5.1 35 47-81 4-42 (262)
394 1cjc_A Protein (adrenodoxin re 91.5 0.18 6.3E-06 50.7 5.4 36 46-81 144-200 (460)
395 1hyh_A L-hicdh, L-2-hydroxyiso 91.5 0.17 5.7E-06 48.0 4.7 32 48-79 2-35 (309)
396 4gwg_A 6-phosphogluconate dehy 91.4 0.2 6.8E-06 50.4 5.5 35 46-80 3-37 (484)
397 1x0v_A GPD-C, GPDH-C, glycerol 91.4 0.11 3.8E-06 50.3 3.5 35 47-81 8-49 (354)
398 3phh_A Shikimate dehydrogenase 91.4 0.24 8.1E-06 45.6 5.5 33 47-79 118-150 (269)
399 2pv7_A T-protein [includes: ch 91.4 0.25 8.6E-06 46.5 5.9 34 47-80 21-55 (298)
400 1oju_A MDH, malate dehydrogena 91.3 0.18 6E-06 47.3 4.6 32 48-79 1-34 (294)
401 3zwc_A Peroxisomal bifunctiona 91.2 0.26 9E-06 52.3 6.4 37 44-80 313-349 (742)
402 2eez_A Alanine dehydrogenase; 91.2 0.22 7.5E-06 48.5 5.4 35 46-80 165-199 (369)
403 2zyd_A 6-phosphogluconate dehy 91.2 0.18 6.1E-06 51.0 4.9 35 45-79 13-47 (480)
404 3nep_X Malate dehydrogenase; h 91.2 0.19 6.5E-06 47.5 4.8 33 48-80 1-35 (314)
405 3lzw_A Ferredoxin--NADP reduct 91.2 0.17 5.6E-06 48.2 4.5 36 47-82 154-189 (332)
406 3e8x_A Putative NAD-dependent 91.2 0.22 7.5E-06 44.9 5.0 35 45-79 19-54 (236)
407 1vpd_A Tartronate semialdehyde 91.1 0.19 6.4E-06 47.3 4.8 32 48-79 6-37 (299)
408 2f1k_A Prephenate dehydrogenas 91.1 0.23 7.9E-06 46.1 5.3 32 48-79 1-32 (279)
409 3fi9_A Malate dehydrogenase; s 91.1 0.26 8.8E-06 47.2 5.6 34 46-79 7-43 (343)
410 1hdo_A Biliverdin IX beta redu 91.1 0.26 9E-06 43.0 5.4 33 48-80 4-37 (206)
411 3ktd_A Prephenate dehydrogenas 91.1 0.26 9E-06 47.2 5.7 34 46-79 7-40 (341)
412 1pjq_A CYSG, siroheme synthase 91.0 0.19 6.5E-06 50.5 4.9 34 46-79 11-44 (457)
413 3ew7_A LMO0794 protein; Q8Y8U8 91.0 0.25 8.5E-06 43.8 5.3 32 48-79 1-33 (221)
414 1edz_A 5,10-methylenetetrahydr 91.0 0.2 6.7E-06 47.2 4.6 35 45-79 175-210 (320)
415 3vku_A L-LDH, L-lactate dehydr 91.0 0.23 8E-06 47.1 5.1 34 46-79 8-43 (326)
416 2q3e_A UDP-glucose 6-dehydroge 91.0 0.17 6E-06 51.0 4.5 33 48-80 6-40 (467)
417 3o38_A Short chain dehydrogena 90.9 0.3 1E-05 45.0 5.8 35 45-79 20-56 (266)
418 1wdk_A Fatty oxidation complex 90.9 0.21 7.1E-06 53.2 5.3 35 46-80 313-347 (715)
419 3fbs_A Oxidoreductase; structu 90.9 0.16 5.6E-06 47.4 4.1 34 46-80 140-173 (297)
420 1yj8_A Glycerol-3-phosphate de 90.8 0.17 5.9E-06 49.4 4.2 35 47-81 21-62 (375)
421 1yqg_A Pyrroline-5-carboxylate 90.8 0.22 7.4E-06 45.9 4.7 32 48-79 1-33 (263)
422 3tri_A Pyrroline-5-carboxylate 90.6 0.3 1E-05 45.4 5.5 33 47-79 3-38 (280)
423 1p77_A Shikimate 5-dehydrogena 90.6 0.23 7.8E-06 46.0 4.6 34 46-79 118-151 (272)
424 3cky_A 2-hydroxymethyl glutara 90.5 0.23 8E-06 46.7 4.8 33 47-79 4-36 (301)
425 2egg_A AROE, shikimate 5-dehyd 90.5 0.27 9.3E-06 46.2 5.2 34 46-79 140-174 (297)
426 4id9_A Short-chain dehydrogena 90.5 0.25 8.5E-06 47.5 5.1 38 44-81 16-54 (347)
427 3c7a_A Octopine dehydrogenase; 90.4 0.15 5.2E-06 50.3 3.5 31 48-78 3-34 (404)
428 2g5c_A Prephenate dehydrogenas 90.4 0.31 1E-05 45.4 5.4 32 48-79 2-35 (281)
429 3h2s_A Putative NADH-flavin re 90.4 0.3 1E-05 43.4 5.2 32 48-79 1-33 (224)
430 3gt0_A Pyrroline-5-carboxylate 90.3 0.32 1.1E-05 44.3 5.4 32 48-79 3-38 (247)
431 2vhw_A Alanine dehydrogenase; 90.3 0.3 1E-05 47.6 5.4 35 46-80 167-201 (377)
432 1yb4_A Tartronic semialdehyde 90.2 0.18 6.1E-06 47.3 3.7 32 47-79 3-34 (295)
433 4b4o_A Epimerase family protei 90.2 0.34 1.2E-05 45.4 5.7 33 48-80 1-34 (298)
434 2gf2_A Hibadh, 3-hydroxyisobut 90.2 0.26 8.8E-06 46.2 4.7 32 48-79 1-32 (296)
435 2ahr_A Putative pyrroline carb 90.2 0.25 8.5E-06 45.3 4.5 33 47-79 3-35 (259)
436 3vps_A TUNA, NAD-dependent epi 90.1 0.32 1.1E-05 46.0 5.4 36 46-81 6-42 (321)
437 3ojo_A CAP5O; rossmann fold, c 90.1 0.25 8.5E-06 48.9 4.6 33 48-80 12-44 (431)
438 1smk_A Malate dehydrogenase, g 90.1 0.2 6.9E-06 47.8 3.9 34 46-79 7-43 (326)
439 2aef_A Calcium-gated potassium 90.1 0.12 4E-06 46.8 2.1 34 46-80 8-41 (234)
440 3d1l_A Putative NADP oxidoredu 90.0 0.24 8.2E-06 45.6 4.3 33 47-79 10-43 (266)
441 2pgd_A 6-phosphogluconate dehy 89.9 0.32 1.1E-05 49.2 5.5 33 48-80 3-35 (482)
442 2qrj_A Saccharopine dehydrogen 89.9 0.24 8.4E-06 48.0 4.3 40 46-85 213-257 (394)
443 4a9w_A Monooxygenase; baeyer-v 89.9 0.26 8.9E-06 47.3 4.6 33 46-79 162-194 (357)
444 1o94_A Tmadh, trimethylamine d 89.9 0.26 8.9E-06 52.8 5.0 35 46-80 527-563 (729)
445 1w4x_A Phenylacetone monooxyge 89.6 0.27 9.1E-06 50.7 4.7 36 46-81 185-220 (542)
446 2p4q_A 6-phosphogluconate dehy 89.6 0.36 1.2E-05 48.9 5.5 35 46-80 9-43 (497)
447 2iz1_A 6-phosphogluconate dehy 89.6 0.36 1.2E-05 48.7 5.5 33 47-79 5-37 (474)
448 2cvz_A Dehydrogenase, 3-hydrox 89.5 0.27 9.1E-06 45.9 4.3 31 48-79 2-32 (289)
449 2hk9_A Shikimate dehydrogenase 89.5 0.32 1.1E-05 45.1 4.7 33 47-79 129-161 (275)
450 3r6d_A NAD-dependent epimerase 89.5 0.5 1.7E-05 42.0 5.8 32 48-79 6-39 (221)
451 2pzm_A Putative nucleotide sug 89.4 0.39 1.3E-05 45.8 5.4 38 43-80 16-54 (330)
452 2zqz_A L-LDH, L-lactate dehydr 89.4 0.39 1.3E-05 45.7 5.3 35 45-79 7-43 (326)
453 3ond_A Adenosylhomocysteinase; 89.3 0.42 1.4E-05 47.8 5.5 34 46-79 264-297 (488)
454 4iiu_A 3-oxoacyl-[acyl-carrier 89.3 0.32 1.1E-05 44.8 4.6 55 20-79 4-59 (267)
455 1b8p_A Protein (malate dehydro 89.3 0.27 9.4E-06 46.9 4.1 34 46-79 4-45 (329)
456 3dhn_A NAD-dependent epimerase 89.2 0.33 1.1E-05 43.3 4.4 34 47-80 4-38 (227)
457 1leh_A Leucine dehydrogenase; 89.2 0.51 1.8E-05 45.5 6.0 35 45-79 171-205 (364)
458 3pwz_A Shikimate dehydrogenase 89.2 0.53 1.8E-05 43.4 5.9 34 46-79 119-153 (272)
459 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.2 0.35 1.2E-05 48.8 5.1 32 48-79 2-33 (478)
460 1a4i_A Methylenetetrahydrofola 89.2 0.43 1.5E-05 44.3 5.2 35 45-79 163-198 (301)
461 1gte_A Dihydropyrimidine dehyd 89.2 0.41 1.4E-05 53.4 6.0 34 47-80 332-366 (1025)
462 2gag_A Heterotetrameric sarcos 89.1 0.19 6.4E-06 55.7 3.2 36 47-82 284-319 (965)
463 2rir_A Dipicolinate synthase, 89.1 0.44 1.5E-05 44.8 5.4 34 46-79 156-189 (300)
464 3jyo_A Quinate/shikimate dehyd 89.1 0.53 1.8E-05 43.8 5.8 34 46-79 126-160 (283)
465 3don_A Shikimate dehydrogenase 89.0 0.35 1.2E-05 44.8 4.5 35 46-80 116-151 (277)
466 2x6t_A ADP-L-glycero-D-manno-h 88.9 0.39 1.3E-05 46.4 5.0 34 47-80 46-81 (357)
467 3tnl_A Shikimate dehydrogenase 88.9 0.52 1.8E-05 44.5 5.7 34 46-79 153-187 (315)
468 1np3_A Ketol-acid reductoisome 88.8 0.47 1.6E-05 45.5 5.4 34 47-80 16-49 (338)
469 1i36_A Conserved hypothetical 88.8 0.39 1.3E-05 44.1 4.7 31 48-78 1-31 (264)
470 3i6i_A Putative leucoanthocyan 88.7 0.42 1.4E-05 45.9 5.1 35 46-80 9-44 (346)
471 4gbj_A 6-phosphogluconate dehy 88.7 0.33 1.1E-05 45.6 4.2 33 48-80 6-38 (297)
472 3d4o_A Dipicolinate synthase s 88.7 0.48 1.7E-05 44.4 5.4 34 46-79 154-187 (293)
473 3fbt_A Chorismate mutase and s 88.7 0.49 1.7E-05 43.9 5.2 34 46-79 121-155 (282)
474 3h8v_A Ubiquitin-like modifier 88.6 0.38 1.3E-05 44.8 4.4 34 46-79 35-69 (292)
475 3b1f_A Putative prephenate deh 88.6 0.39 1.3E-05 44.8 4.7 33 47-79 6-40 (290)
476 1lqt_A FPRA; NADP+ derivative, 88.6 0.44 1.5E-05 47.9 5.3 36 46-81 146-202 (456)
477 2x0j_A Malate dehydrogenase; o 88.5 0.38 1.3E-05 44.9 4.4 32 48-79 1-34 (294)
478 1mld_A Malate dehydrogenase; o 88.5 0.36 1.2E-05 45.7 4.3 33 48-80 1-36 (314)
479 1nvt_A Shikimate 5'-dehydrogen 88.3 0.42 1.4E-05 44.6 4.7 33 46-79 127-159 (287)
480 3rui_A Ubiquitin-like modifier 88.3 0.54 1.9E-05 44.7 5.4 34 46-79 33-67 (340)
481 1ez4_A Lactate dehydrogenase; 88.3 0.46 1.6E-05 45.1 4.9 33 47-79 5-39 (318)
482 3qvo_A NMRA family protein; st 88.3 0.29 1E-05 44.1 3.5 37 44-80 20-58 (236)
483 4a26_A Putative C-1-tetrahydro 88.2 0.51 1.7E-05 43.8 4.9 35 45-79 163-198 (300)
484 3k30_A Histamine dehydrogenase 88.1 0.47 1.6E-05 50.4 5.5 38 46-83 522-561 (690)
485 3o8q_A Shikimate 5-dehydrogena 88.0 0.59 2E-05 43.4 5.4 34 46-79 125-159 (281)
486 3ngx_A Bifunctional protein fo 88.0 0.54 1.9E-05 43.0 5.0 35 45-79 148-183 (276)
487 1kdg_A CDH, cellobiose dehydro 88.0 1 3.5E-05 46.3 7.8 38 45-82 5-42 (546)
488 1zud_1 Adenylyltransferase THI 88.0 0.5 1.7E-05 43.1 4.9 33 47-79 28-61 (251)
489 1b0a_A Protein (fold bifunctio 88.0 0.5 1.7E-05 43.5 4.8 35 45-79 157-192 (288)
490 3u62_A Shikimate dehydrogenase 87.8 0.55 1.9E-05 42.8 5.0 31 49-79 110-141 (253)
491 3gvp_A Adenosylhomocysteinase 87.8 0.48 1.6E-05 46.4 4.7 35 46-80 219-253 (435)
492 1y1p_A ARII, aldehyde reductas 87.8 0.77 2.6E-05 43.7 6.3 35 45-79 9-44 (342)
493 3fpz_A Thiazole biosynthetic e 87.6 0.36 1.2E-05 46.0 3.8 41 450-491 280-325 (326)
494 4hv4_A UDP-N-acetylmuramate--L 87.6 0.4 1.4E-05 48.7 4.3 35 45-79 20-55 (494)
495 1lu9_A Methylene tetrahydromet 87.4 0.72 2.4E-05 43.0 5.7 34 46-79 118-152 (287)
496 3t4e_A Quinate/shikimate dehyd 87.4 0.72 2.5E-05 43.4 5.6 34 46-79 147-181 (312)
497 1ff9_A Saccharopine reductase; 87.3 0.47 1.6E-05 47.5 4.5 33 47-79 3-35 (450)
498 3d7l_A LIN1944 protein; APC893 87.3 0.62 2.1E-05 40.6 4.9 33 47-80 3-36 (202)
499 3ce6_A Adenosylhomocysteinase; 87.2 0.67 2.3E-05 46.7 5.5 35 46-80 273-307 (494)
500 2d5c_A AROE, shikimate 5-dehyd 87.2 0.63 2.1E-05 42.8 5.0 31 49-79 118-148 (263)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=7.6e-36 Score=304.66 Aligned_cols=407 Identities=14% Similarity=0.104 Sum_probs=275.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC----------Ccccccccc--cCCCcHHHHHHHhCCCCCCcc
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP----------DDISMQGFW--YPFRNIFSLVDELGIKPFTGW 115 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~----------~~~G~~~~~--~~~~~~~~~~~~lg~~~~~~~ 115 (533)
|||||||||++||+||++|+++|++|+|||+++++||+ ++.|++.+. ...+.+.++++++|+......
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR 80 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence 58999999999999999999999999999999999998 345654433 245578899999998633221
Q ss_pred cc-cce-ecCCCceecccccccCCCCCCCcccchhhhh-cCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHHH
Q 009508 116 MK-SAQ-YSEEGLEVEFPIFQDLNQLPTPLGTLFYTQF-SRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFK 192 (533)
Q Consensus 116 ~~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 192 (533)
.. ... +..++.... .........+..+ ..++..++......+..... ...+..++.+|++
T Consensus 81 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~s~~~~l~ 143 (425)
T 3ka7_A 81 SEMTTVRVPLKKGNPD---------YVKGFKDISFNDFPSLLSYKDRMKIALLIVSTRK--------NRPSGSSLQAWIK 143 (425)
T ss_dssp CCCCEEEEESSTTCCS---------STTCEEEEEGGGGGGGSCHHHHHHHHHHHHHTTT--------SCCCSSBHHHHHH
T ss_pred cCCceEEeecCCCccc---------ccccccceehhhhhhhCCHHHHHHHHHHHHhhhh--------cCCCCCCHHHHHH
Confidence 11 111 110000000 0000000001111 11233333322221111100 1235678999999
Q ss_pred HhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhhcCCcceeeecCCcchhhHHHHHHHHHhcCCEEEcCc
Q 009508 193 QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGR 272 (533)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~~ 272 (533)
+. +.++....++.++....++.++.++++......+...... ....++.||+ ..++++|.+.++++|++|++|+
T Consensus 144 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~----~~~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~ 217 (425)
T 3ka7_A 144 SQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRF----GGTGIPEGGC-KGIIDALETVISANGGKIHTGQ 217 (425)
T ss_dssp HH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH----CSCEEETTSH-HHHHHHHHHHHHHTTCEEECSC
T ss_pred Hh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhc----CCccccCCCH-HHHHHHHHHHHHHcCCEEEECC
Confidence 87 4566778888888878888899999987666665544221 1234677885 4799999999999999999999
Q ss_pred eeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhcccc--CchhHHhhccCcceeeEEEEEEeccCCCCC
Q 009508 273 RVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILC--NREEFLKVLNLASIDVVSVKLWFDKKVTVP 350 (533)
Q Consensus 273 ~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~--~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~ 350 (533)
+|++|..++ +++++|++++++++||.||+|+|++.+.+++++.... .....+.+..+.+.+..+++++++.+..
T Consensus 218 ~V~~i~~~~--~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~-- 293 (425)
T 3ka7_A 218 EVSKILIEN--GKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLV-- 293 (425)
T ss_dssp CEEEEEEET--TEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSS--
T ss_pred ceeEEEEEC--CEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCcc--
Confidence 999999886 7777788888899999999999999999998754211 2233456777777777889999998754
Q ss_pred CCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCccccceeee
Q 009508 351 NVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRR 430 (533)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r 430 (533)
..+..++..+......+...+...+.+.+++++++.+.++...+..+. .++..+.++++|++++|+.. .....+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~~~---~~~~~v~~ 369 (425)
T 3ka7_A 294 GHTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPGKR---YEVLLIQS 369 (425)
T ss_dssp CSSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTTCC---EEEEEEEE
T ss_pred CcCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCCCc---eEEEEEEE
Confidence 233444433211111233445566777788888876655433222222 34557999999999999832 22336778
Q ss_pred CCCCccccCCCccccCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHH
Q 009508 431 FPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 487 (533)
Q Consensus 431 ~~~~~~~~~pg~~~~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il 487 (533)
|+.++|.+.+|. ..++...+|++|||+||||+.+..+ .+|++|+.||++||++|+
T Consensus 370 ~~~~~P~~~~~~-~~~~~~~~p~~gL~laG~~~~~~gg-~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 370 YHDEWPVNRAAS-GTDPGNETPFSGLYVVGDGAKGKGG-IEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp EBTTBCSBSSCT-TCCCCSBCSSBTEEECSTTSCCTTC-CHHHHHHHHHHHHHHC--
T ss_pred ECCCcccccccc-CCCCCCCCCcCCeEEeCCccCCCCC-CccHHHHHHHHHHHHHhh
Confidence 999999999885 3567778899999999999998666 699999999999999986
No 2
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=8.4e-33 Score=281.56 Aligned_cols=399 Identities=15% Similarity=0.102 Sum_probs=257.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC----------Cccccccccc--CCCcHHHHHHHhCCCCCCc-
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP----------DDISMQGFWY--PFRNIFSLVDELGIKPFTG- 114 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~----------~~~G~~~~~~--~~~~~~~~~~~lg~~~~~~- 114 (533)
+||||||||++||+||++|+++|++|+|||+++++||+ ++.|++.+.. ..+.+.++++++|+.....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN 80 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEEE
Confidence 58999999999999999999999999999999999998 3455544332 3557888999998863211
Q ss_pred ccccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHHHHh
Q 009508 115 WMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQF 194 (533)
Q Consensus 115 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~ 194 (533)
......+..+|..+..+.. ...++..++..+...+...... ....+..++.+|+++.
T Consensus 81 ~~~~~~~~~~g~~~~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~s~~~~l~~~ 137 (421)
T 3nrn_A 81 SNPKGKILWEGKIFHYRES-----------------WKFLSVKEKAKALKLLAEIRMN------KLPKEEIPADEWIKEK 137 (421)
T ss_dssp CSSSCEEEETTEEEEGGGG-----------------GGGCC--------CCHHHHHTT------CCCCCCSBHHHHHHHH
T ss_pred CCCCeEEEECCEEEEcCCc-----------------hhhCCHhHHHHHHHHHHHHHhc------cCCCCCCCHHHHHHHh
Confidence 1111111113332221100 0011111221111111111100 1112347899999998
Q ss_pred CCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhhcCCcceeeecCCcchhhHHHHHHHHHhcCCEEEcCcee
Q 009508 195 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRV 274 (533)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~~~V 274 (533)
+++++....++.++....++.++.++++......+..+... ....++.||+ ..++++|.+.++++|++|++|++|
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V 212 (421)
T 3nrn_A 138 IGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRW----GGPGLIRGGC-KAVIDELERIIMENKGKILTRKEV 212 (421)
T ss_dssp TCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH----CSCEEETTCH-HHHHHHHHHHHHTTTCEEESSCCE
T ss_pred cCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhc----CCcceecCCH-HHHHHHHHHHHHHCCCEEEcCCeE
Confidence 67777778888898888889999999987666666554221 1235678885 589999999999999999999999
Q ss_pred eEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEEeccCCCCCCCCc
Q 009508 275 TDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSN 354 (533)
Q Consensus 275 ~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~ 354 (533)
++|..++ +.+ |.++++++.||.||+|+|++.+.+|++....+ ....+.+..+.+.+..++++.++.+.. ..+.
T Consensus 213 ~~i~~~~--~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~v~l~~~~~~~--~~~~ 285 (421)
T 3nrn_A 213 VEINIEE--KKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFD-RDYLKQVDSIEPSEGIKFNLAVPGEPR--IGNT 285 (421)
T ss_dssp EEEETTT--TEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSC-HHHHHHHHTCCCCCEEEEEEEEESSCS--SCSS
T ss_pred EEEEEEC--CEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCC-HHHHHHHhCCCCCceEEEEEEEcCCcc--cCCe
Confidence 9999876 555 66677799999999999999999998743221 123455777777788888999988742 2334
Q ss_pred eeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCccccceeeeCCCC
Q 009508 355 ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS 434 (533)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~ 434 (533)
.+++.+... ..+...+...+.+.+.+++++.+..+.. ..++++..+.++++|++++| ..++. .+.+|..+
T Consensus 286 ~~~~~~~~~-~~i~~~s~~~p~~ap~G~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~~p---~~~~~--~~~~~~~~ 355 (421)
T 3nrn_A 286 IVFTPGLMI-NGFNEPSALDKSLAREGYTLIMAHMALK----NGNVKKAIEKGWEELLEIFP---EGEPL--LAQVYRDG 355 (421)
T ss_dssp EEECTTSSS-CEEECGGGTCGGGSCTTEEEEEEEEECT----TCCHHHHHHHHHHHHHHHCT---TCEEE--EEEEC---
T ss_pred EEEcCCcce-eeEeccCCCCCCcCCCCceEEEEEEeec----cccHHHHHHHHHHHHHHHcC---CCeEE--EeeeccCC
Confidence 444433221 1223344555666666777766554432 22344668999999999999 22333 45667777
Q ss_pred ccccCCCccccCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHHhCCCCCcccc
Q 009508 435 LTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKII 499 (533)
Q Consensus 435 ~~~~~pg~~~~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~~g~~~~~~~~ 499 (533)
++.+.+......+ .++ +|||+||||+.++.+ .+|++|+.||++||+.| |.++..+.+
T Consensus 356 ~p~~~~~~~~~~~--~~~-~gl~laGd~~~~~~g-~~~~ga~~sg~~aA~~l----~~~~~~~~~ 412 (421)
T 3nrn_A 356 NPVNRTRAGLHIE--WPL-NEVLVVGDGYRPPGG-IEVDGIALGVMKALEKL----NLGSFSEWY 412 (421)
T ss_dssp ----------CCC--CCC-SSEEECSTTCCCTTC-CHHHHHHHHHHHHHHHT----TSCCCCTTT
T ss_pred CCcccccCCCCCC--CCC-CcEEEECCcccCCCc-eeeehHHHHHHHHHHHh----CcCchhhhh
Confidence 7766332212233 667 999999999986544 47799999999999999 555655444
No 3
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=4.7e-33 Score=291.01 Aligned_cols=426 Identities=18% Similarity=0.159 Sum_probs=265.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-----------CcccccccccCCCcHHHHHHHhCCCCCCc
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP-----------DDISMQGFWYPFRNIFSLVDELGIKPFTG 114 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~-----------~~~G~~~~~~~~~~~~~~~~~lg~~~~~~ 114 (533)
+++||||||||++||+||+.|+++|++|+|||+++++||+ +|.|.+.+...++.+.++++++|++....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKV 82 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceec
Confidence 3579999999999999999999999999999999999998 34566777666677889999999884332
Q ss_pred cccc-ceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCc-----hhhhccCCccHH
Q 009508 115 WMKS-AQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTD-----VAWRKYDSITAR 188 (533)
Q Consensus 115 ~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~ 188 (533)
.... ..+..+|..+..+. .++..........+. .....+.......... .....++.+|+.
T Consensus 83 ~~~~~~~~~~~g~~~~~~~-----~~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 149 (520)
T 1s3e_A 83 NEVERLIHHVKGKSYPFRG-----PFPPVWNPITYLDHN--------NFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMK 149 (520)
T ss_dssp CCSSEEEEEETTEEEEECS-----SSCCCCSHHHHHHHH--------HHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHH
T ss_pred ccCCceEEEECCEEEEecC-----CCCCCCCHHHHHHHH--------HHHHHHHHHHhhcCcCCCccccchhhhhccCHH
Confidence 2211 12222333222110 011101000000000 0000011110000000 111235678999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHH-----HhhcCCcceeeecCCcchhhHHHHHHHHHh
Q 009508 189 ELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII-----LAHQKNFDLVWCRGTLREKIFEPWMDSMRT 263 (533)
Q Consensus 189 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~ 263 (533)
+|+++...++.. ..++.+++...++.++.++++..++..+.... ..........++.||++ .+++.+.+.+
T Consensus 150 ~~l~~~~~~~~~-~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l-- 225 (520)
T 1s3e_A 150 ELLDKLCWTESA-KQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSG-QVSERIMDLL-- 225 (520)
T ss_dssp HHHHHHCSSHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTH-HHHHHHHHHH--
T ss_pred HHHHhhCCCHHH-HHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHH-HHHHHHHHHc--
Confidence 999988765544 77888888888888999998876543332110 00011122345678764 7877777554
Q ss_pred cCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEE
Q 009508 264 RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLW 342 (533)
Q Consensus 264 ~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~ 342 (533)
|++|++|++|++|..++ +.+. |.+ +++++.||+||+|+|+..+.+++.+++.+ ....+.++.+.+.+..++++.
T Consensus 226 -g~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp-~~~~~~i~~~~~~~~~kv~l~ 300 (520)
T 1s3e_A 226 -GDRVKLERPVIYIDQTR--ENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLP-MMRNQMITRVPLGSVIKCIVY 300 (520)
T ss_dssp -GGGEESSCCEEEEECSS--SSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCC-HHHHHHTTSCCBCCEEEEEEE
T ss_pred -CCcEEcCCeeEEEEECC--CeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCC-HHHHHHHHhCCCcceEEEEEE
Confidence 78999999999999876 4444 555 45589999999999999988776443221 223345788888888999999
Q ss_pred eccCCCCCCCCce-ee--ccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHHHHHHhhhhcC
Q 009508 343 FDKKVTVPNVSNA-CS--GFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKD 417 (533)
Q Consensus 343 ~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~ei~~~~~~~l~~~~p~ 417 (533)
|+.++|...+... .+ ..+.... ..++.+. .+++..++...+.+ ...+..++++++.+.++++|+++||.
T Consensus 301 ~~~~~w~~~~~~g~~~~~~~~~~~~-~~~d~~~-----~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~ 374 (520)
T 1s3e_A 301 YKEPFWRKKDYCGTMIIDGEEAPVA-YTLDDTK-----PEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGS 374 (520)
T ss_dssp CSSCGGGGGTEEEEEEECSTTCSCS-EEEECCC-----TTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTC
T ss_pred eCCCcccCCCCCceeeccCCCCceE-EEeeCCC-----CCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCc
Confidence 9998874332211 11 1111121 2333321 11122333322222 23456678999999999999999985
Q ss_pred CCCCccccceeeeCCC------Ccc-ccCCCccc-cCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 009508 418 FSTATVMDHKIRRFPK------SLT-HFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 489 (533)
Q Consensus 418 ~~~~~v~~~~~~r~~~------~~~-~~~pg~~~-~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~ 489 (533)
....++.+....+|.. ++. .+.||+.. ..+...+|++||||||++++..++ ++|+||+.||++||++|++.
T Consensus 375 ~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~-g~v~GAi~SG~~aA~~i~~~ 453 (520)
T 1s3e_A 375 LEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWS-GYMEGAVEAGERAAREILHA 453 (520)
T ss_dssp GGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSST-TSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCc-EEhHHHHHHHHHHHHHHHHH
Confidence 3112445555555642 122 35566532 234566788999999999987777 79999999999999999999
Q ss_pred hCCCCCccccc
Q 009508 490 LGDGSFSKIIP 500 (533)
Q Consensus 490 ~g~~~~~~~~~ 500 (533)
++...+..+-.
T Consensus 454 l~~~~~~~~~~ 464 (520)
T 1s3e_A 454 MGKIPEDEIWQ 464 (520)
T ss_dssp TTSSCGGGSSC
T ss_pred HhcCccccccc
Confidence 98755544433
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=285.79 Aligned_cols=411 Identities=15% Similarity=0.133 Sum_probs=267.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCCCCCCCC-----------cccccccccC---CCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGNGFGSPD-----------DISMQGFWYP---FRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~~~~GG~~-----------~~G~~~~~~~---~~~~~~~~~~lg~~ 110 (533)
++||+|||||++||+||++|+++|+ +|+|||+++++||++ +.|.+.+... ++.+.++++++|+.
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 4799999999999999999999999 999999999999982 3444544332 44577899999987
Q ss_pred CCCccc-------ccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccC
Q 009508 111 PFTGWM-------KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYD 183 (533)
Q Consensus 111 ~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (533)
...... ...+...+|.....+. ....+... ...+. .......+.... . .....+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~p~--~~~~~~~~--------~~~~~---~~~~~~~~~~~~---~---~~~~~~ 142 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYVGGALHALPT--GLRGLLRP--------SPPFS---KPLFWAGLRELT---K---PRGKEP 142 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEETTEEEECCC--SSCC---C--------CTTSC---SCSSHHHHTTTT---S---CCCCSS
T ss_pred ceeeecCCCCchhcceEEEECCEEEECCC--Chhhcccc--------cchhh---hHHHHHHHHhhh---c---CCCCCC
Confidence 432211 1112222333222211 00001000 00000 000000011100 0 112335
Q ss_pred CccHHHHHHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhh--------------------------c
Q 009508 184 SITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH--------------------------Q 237 (533)
Q Consensus 184 ~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~--------------------------~ 237 (533)
+.++.+|+++. ++.+..+.++.+++...++.++.++++......+....... .
T Consensus 143 ~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~ 221 (477)
T 3nks_A 143 DETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALA 221 (477)
T ss_dssp CCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHH
T ss_pred CcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcc
Confidence 67999999873 56888899999999999999999998876655443321111 1
Q ss_pred CCcceeeecCCcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhc
Q 009508 238 KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNS 317 (533)
Q Consensus 238 ~~~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~ 317 (533)
....+.+++||+. .+++.|.+.+++.|++|++|++|++|..++ ++ ++.|+++++++.||+||+|+|++.+.++++..
T Consensus 222 ~~~~~~~~~gG~~-~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~-~~-~~~v~~~~~~~~ad~vv~a~p~~~~~~ll~~~ 298 (477)
T 3nks_A 222 ERWSQWSLRGGLE-MLPQALETHLTSRGVSVLRGQPVCGLSLQA-EG-RWKVSLRDSSLEADHVISAIPASVLSELLPAE 298 (477)
T ss_dssp TTCSEEEETTCTT-HHHHHHHHHHHHTTCEEECSCCCCEEEECG-GG-CEEEECSSCEEEESEEEECSCHHHHHHHSCGG
T ss_pred cCccEEEECCCHH-HHHHHHHHHHHhcCCEEEeCCEEEEEEEcC-Cc-eEEEEECCeEEEcCEEEECCCHHHHHHhcccc
Confidence 1223456778865 899999999999999999999999999876 33 23466677789999999999999999998764
Q ss_pred cccCchhHHhhccCcceeeEEEEEEeccCCCCCCCCceeeccCC---CccceeeeccccccccCCCCCeEEEEEecCC--
Q 009508 318 ILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD---SLAWTFFDLNKIYDEHKDDSATVIQADFYHA-- 392 (533)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 392 (533)
. ++..+.+..+.+.++.++.+.|+.+++.......+....+ ..++ .|+.........+++..++.+.+.+.
T Consensus 299 ~---~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~l~~~~gg~~~ 374 (477)
T 3nks_A 299 A---APLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGI-VYDSVAFPEQDGSPPGLRVTVMLGGSWL 374 (477)
T ss_dssp G---HHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEE-ECHHHHCGGGSTTTTCEEEEEEECHHHH
T ss_pred C---HHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEE-EEeccccCCCCCCCCceEEEEEECCccc
Confidence 2 2344567888889999999999998774333333322111 1122 33322211111122445543332211
Q ss_pred ----CCCCCCCHHHHHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCC----CCCCCceEEeccccc
Q 009508 393 ----NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG----FTSFPNLFMAGDWIT 464 (533)
Q Consensus 393 ----~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~----~~~~~~l~~aG~~~~ 464 (533)
......+++++.+.++++|.++|+. . .++....+.+|+++++.+.+|+...+... ....+||++||+|..
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~L~~~~g~-~-~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~ 452 (477)
T 3nks_A 375 QTLEASGCVLSQELFQQRAQEAAATQLGL-K-EMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYE 452 (477)
T ss_dssp HHHHHSSCCCCHHHHHHHHHHHHHHHHCC-C-SCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTS
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHhCC-C-CCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCC
Confidence 1122468999999999999999964 2 35677788899999999999975322111 112368999999984
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHh
Q 009508 465 TRHGSWSQERSYVTGLEAANRVVDYL 490 (533)
Q Consensus 465 ~g~~~~~iegA~~SG~~aA~~Il~~~ 490 (533)
| .++++|+.||+++|++|++..
T Consensus 453 -G---~gv~~a~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 453 -G---VAVNDCIESGRQAAVSVLGTE 474 (477)
T ss_dssp -C---CSHHHHHHHHHHHHHHHHHCC
T ss_pred -C---CcHHHHHHHHHHHHHHHHhcc
Confidence 3 469999999999999998753
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=2.7e-32 Score=282.60 Aligned_cols=410 Identities=16% Similarity=0.130 Sum_probs=262.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC----------CcccccccccCCCcHHHHHHHhCCCCCCc
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP----------DDISMQGFWYPFRNIFSLVDELGIKPFTG 114 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~----------~~~G~~~~~~~~~~~~~~~~~lg~~~~~~ 114 (533)
...+||+|||||++||+||+.|+++|++|+|||+++++||+ +|.|++.+...++.+.++++++|+.....
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~~ 93 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRIR 93 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCcceee
Confidence 45689999999999999999999999999999999999999 57788888776778899999999863221
Q ss_pred cc----ccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccHHHH
Q 009508 115 WM----KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITAREL 190 (533)
Q Consensus 115 ~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 190 (533)
+. ...++..+|..+.. +..... +.....+.+.++... +...... .....+..|+.+|
T Consensus 94 ~~~~~~~~~~~~~~g~~~~~---------p~~~~~--~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~s~~~~ 154 (478)
T 2ivd_A 94 AADPAAKRRYVYTRGRLRSV---------PASPPA--FLASDILPLGARLRV---AGELFSR-----RAPEGVDESLAAF 154 (478)
T ss_dssp CSCSSCCCEEEEETTEEEEC---------CCSHHH--HHTCSSSCHHHHHHH---HGGGGCC-----CCCTTCCCBHHHH
T ss_pred ecCccccceEEEECCEEEEC---------CCCHHH--hccCCCCCHHHHHHH---hhhhhcC-----CCCCCCCCCHHHH
Confidence 11 11222223322211 111100 000111222222211 1111111 0123567899999
Q ss_pred HHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHh---------------------hcCC----cceeee
Q 009508 191 FKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA---------------------HQKN----FDLVWC 245 (533)
Q Consensus 191 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~---------------------~~~~----~~~~~~ 245 (533)
+++. ++++..+.++.+++...++.++.++++...+..+..+... .... ....++
T Consensus 155 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (478)
T 2ivd_A 155 GRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTF 233 (478)
T ss_dssp HHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEE
T ss_pred HHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEE
Confidence 9985 6788889999999989999999998876554433322110 0011 334567
Q ss_pred cCCcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe----CCeeeecCEEEEccChhhHHHhhhhccccC
Q 009508 246 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGISTLQELIKNSILCN 321 (533)
Q Consensus 246 ~g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~----~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~ 321 (533)
+||+. .|++.|++.+ |++|+++++|++|..++ ++ +.|++ +++++.||+||+|+|++.+.++++..+
T Consensus 234 ~gG~~-~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~--~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l~--- 303 (478)
T 2ivd_A 234 DGGLQ-VLIDALAASL---GDAAHVGARVEGLARED-GG--WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPLD--- 303 (478)
T ss_dssp TTCTH-HHHHHHHHHH---GGGEESSEEEEEEECC---C--CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTTC---
T ss_pred CCCHH-HHHHHHHHHh---hhhEEcCCEEEEEEecC-Ce--EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhccC---
Confidence 78865 7888888665 67999999999999876 34 33443 456899999999999999998886431
Q ss_pred chhHHhhccCcceeeEEEEEEeccCCCCC-CCCceeecc-C-CCccceeeeccccccccCCCCCeEEEEEecCC--CCCC
Q 009508 322 REEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGF-G-DSLAWTFFDLNKIYDEHKDDSATVIQADFYHA--NELM 396 (533)
Q Consensus 322 ~~~~~~~~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~ 396 (533)
....+.+..+.+.+..++.+.++.+++.. ..+..+... . ....+..++... .+...+.+..++.+.+.+. ..+.
T Consensus 304 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~p~g~~~l~~~~~~~~~~~~~ 382 (478)
T 2ivd_A 304 DALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTT-FPFRAEGGRVLYSCMVGGARQPGLV 382 (478)
T ss_dssp HHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHH-CGGGBSTTCEEEEEEEECTTCGGGG
T ss_pred HHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEccc-CCCcCCCCCEEEEEEeCCcCCcccc
Confidence 22334577888888899999999887543 222222111 0 111222332221 1222333445544333322 2344
Q ss_pred CCCHHHHHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCC----CCCCCCCceEEecccccCCCCCchh
Q 009508 397 PLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMM----RGFTSFPNLFMAGDWITTRHGSWSQ 472 (533)
Q Consensus 397 ~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p----~~~~~~~~l~~aG~~~~~g~~~~~i 472 (533)
..+++++.+.++++|+++||... .+....+.+|.++++.+.+|+..... .... .+||||||+++. + .++
T Consensus 383 ~~~~~~~~~~~~~~l~~~~~~~~--~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~-g---~gv 455 (478)
T 2ivd_A 383 EQDEDALAALAREELKALAGVTA--RPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYK-G---VGL 455 (478)
T ss_dssp GSCHHHHHHHHHHHHHHHHCCCS--CCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTS-C---CSH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCC--CCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCC-C---CCH
Confidence 67889999999999999998742 45566678899988888888632111 1112 689999999983 2 469
Q ss_pred hHHHHHHHHHHHHHHHHhCC
Q 009508 473 ERSYVTGLEAANRVVDYLGD 492 (533)
Q Consensus 473 egA~~SG~~aA~~Il~~~g~ 492 (533)
++|+.||+++|++|++.++.
T Consensus 456 ~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 456 NDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp HHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999988764
No 6
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=2.4e-32 Score=284.11 Aligned_cols=415 Identities=13% Similarity=0.092 Sum_probs=259.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC----------CcccccccccCCCcHHHHHHHhCCCCCCcc
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP----------DDISMQGFWYPFRNIFSLVDELGIKPFTGW 115 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~----------~~~G~~~~~~~~~~~~~~~~~lg~~~~~~~ 115 (533)
.++||+|||||++||+||+.|+++|++|+|+|+++++||+ +|.|++++...++++.++++++|+......
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~ 117 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSP 117 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEE
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCcceeec
Confidence 3489999999999999999999999999999999999999 578889888778889999999998522111
Q ss_pred c------ccceecCC--CceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhc--CCC-CchhhhccCC
Q 009508 116 M------KSAQYSEE--GLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVID--FDN-TDVAWRKYDS 184 (533)
Q Consensus 116 ~------~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~ 184 (533)
. ...++..+ +.....+.. .....+.. .+..+..+... ....... +.. ....+..++.
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 185 (495)
T 2vvm_A 118 SFNFSRGVNHFQLRTNPTTSTYMTHE----AEDELLRS-ALHKFTNVDGT-------NGRTVLPFPHDMFYVPEFRKYDE 185 (495)
T ss_dssp SCCCSSSCCEEEEESSTTCCEEECHH----HHHHHHHH-HHHHHHCSSSS-------TTTTTCSCTTSTTSSTTHHHHHT
T ss_pred ccccCCCceEEEecCCCCceeecCHH----HHHHHHHH-HHHHHHccchh-------hhhhcCCCCCCcccCcchhhhhh
Confidence 1 11111111 111110000 00000000 00000000000 0000000 000 0112344567
Q ss_pred ccHHHHHHHhC--CCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHH---HhhcCCcceeeecCCcchhhHHHHHH
Q 009508 185 ITARELFKQFG--CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII---LAHQKNFDLVWCRGTLREKIFEPWMD 259 (533)
Q Consensus 185 ~s~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~l~~~l~~ 259 (533)
+|+.+|+++.+ .++.. ..++.+++...++.++.++++...+..+.... ...........+.||+. .+++.|.+
T Consensus 186 ~s~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~ 263 (495)
T 2vvm_A 186 MSYSERIDQIRDELSLNE-RSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQS-AFARRFWE 263 (495)
T ss_dssp SBHHHHHHHHGGGCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHH-HHHHHHHH
T ss_pred hhHHHHHHHhhccCCHHH-HHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHH-HHHHHHHH
Confidence 89999999876 66554 67888888888888999998876554332110 00000112234567754 89999999
Q ss_pred HHHhcC-CEEEcCceeeEEEeccCCceEEEEEeCC-eeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeE
Q 009508 260 SMRTRG-CEFLDGRRVTDFIYDEERCCISDVVCGK-ETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVV 337 (533)
Q Consensus 260 ~l~~~G-~~i~~~~~V~~I~~~~~~~~v~~v~~~~-~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~ 337 (533)
.+++.| ++|++|++|++|..++ ++ + .|++.+ ++++||+||+|+|+..+.++...++++ ....+.++.+.+.+..
T Consensus 264 ~l~~~g~~~i~~~~~V~~i~~~~-~~-v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp-~~~~~ai~~~~~~~~~ 339 (495)
T 2vvm_A 264 EAAGTGRLGYVFGCPVRSVVNER-DA-A-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALS-TERISAMQAGHVSMCT 339 (495)
T ss_dssp HHHTTTCEEEESSCCEEEEEECS-SS-E-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCC-HHHHHHHHHCCCCCCE
T ss_pred HhhhcCceEEEeCCEEEEEEEcC-CE-E-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCC-HHHHHHHHhcCCCcee
Confidence 999888 9999999999999875 33 3 355544 479999999999999988765333221 2233457778888888
Q ss_pred EEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhhhhcC
Q 009508 338 SVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKD 417 (533)
Q Consensus 338 ~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ei~~~~~~~l~~~~p~ 417 (533)
++++.|+.++|. ....+...+....+. ++... .+.+..++.. +.+... .+.+++..+.++++|++++|+
T Consensus 340 kv~l~~~~~~~~--~~~g~~~~~~~~~~~-~~~~~-----~~~~~~vl~~-~~~~~~--~~~~~e~~~~~~~~L~~~~~~ 408 (495)
T 2vvm_A 340 KVHAEVDNKDMR--SWTGIAYPFNKLCYA-IGDGT-----TPAGNTHLVC-FGNSAN--HIQPDEDVRETLKAVGQLAPG 408 (495)
T ss_dssp EEEEEESCGGGG--GEEEEECSSCSSCEE-EEEEE-----CTTSCEEEEE-EECSTT--CCCTTTCHHHHHHHHHTTSTT
T ss_pred EEEEEECCccCC--CceeEecCCCCcEEE-ecCCC-----CCCCCeEEEE-EeCccc--cCCCHHHHHHHHHHHHHhcCC
Confidence 999999987752 221111111122222 22111 1222234333 333222 134556678889999999886
Q ss_pred CCCCccccceeeeCC------CCccccCCCccc-cCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHHh
Q 009508 418 FSTATVMDHKIRRFP------KSLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 490 (533)
Q Consensus 418 ~~~~~v~~~~~~r~~------~~~~~~~pg~~~-~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~~ 490 (533)
. ..+....+.+|. ++++.+.||+.. ..+....|.+||||||++++..++ ++||||+.||++||++|++.+
T Consensus 409 ~--~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~-g~veGAi~SG~raA~~i~~~l 485 (495)
T 2vvm_A 409 T--FGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWR-SFIDGAIEEGTRAARVVLEEL 485 (495)
T ss_dssp S--CCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSST-TSHHHHHHHHHHHHHHHHHHH
T ss_pred C--CCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCc-eEEEhHHHHHHHHHHHHHHHh
Confidence 3 245555555663 355566777642 233445678999999999987777 899999999999999999999
Q ss_pred CC
Q 009508 491 GD 492 (533)
Q Consensus 491 g~ 492 (533)
+.
T Consensus 486 ~~ 487 (495)
T 2vvm_A 486 GT 487 (495)
T ss_dssp CC
T ss_pred cc
Confidence 84
No 7
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=1e-32 Score=285.30 Aligned_cols=415 Identities=17% Similarity=0.227 Sum_probs=262.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC------CeEEEEcCCCCCCCC----------CcccccccccCCCcHHHHHHHhCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQG------FDVTVLDDGNGFGSP----------DDISMQGFWYPFRNIFSLVDELGI 109 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G------~~V~vlE~~~~~GG~----------~~~G~~~~~~~~~~~~~~~~~lg~ 109 (533)
+++||+|||||++||+||++|+++| ++|+|||+++++||+ ++.|.+.+...++.+.++++++|+
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 83 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGL 83 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHcCC
Confidence 4589999999999999999999999 999999999999998 467777777778889999999999
Q ss_pred CCCCcc--cccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccH
Q 009508 110 KPFTGW--MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITA 187 (533)
Q Consensus 110 ~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 187 (533)
...... ....++..++.....+. .....++..+.... ....+...++. ........ ......+..++
T Consensus 84 ~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~p~~~~~~~--~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~s~ 152 (470)
T 3i6d_A 84 EHLLVNNATGQSYVLVNRTLHPMPK-GAVMGIPTKIAPFV--STGLFSLSGKA---RAAMDFIL-----PASKTKDDQSL 152 (470)
T ss_dssp CTTEEECCCCCEEEECSSCEEECCC------------------------CCSH---HHHHHHHS-----CCCSSSSCCBH
T ss_pred cceeecCCCCccEEEECCEEEECCC-CcccCCcCchHHhh--ccCcCCHHHHH---HHhcCccc-----CCCCCCCCcCH
Confidence 854322 11122223332222110 00001111111100 00001111111 11111111 01123467899
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhh---------------------cCCcceeeec
Q 009508 188 RELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH---------------------QKNFDLVWCR 246 (533)
Q Consensus 188 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 246 (533)
.+|+++. +..+..+.++.+++...++.++.++++......+..+.... ........+.
T Consensus 153 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (470)
T 3i6d_A 153 GEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLS 231 (470)
T ss_dssp HHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEET
T ss_pred HHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeC
Confidence 9999884 67888889999999999999999888764433221110000 0011233456
Q ss_pred CCcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHHHhhhhccccCchhH
Q 009508 247 GTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEF 325 (533)
Q Consensus 247 g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~ 325 (533)
+|+. .+++.|.+.+.+ ++|++|++|++|+.++ ++ + .|++. +++++||+||+|+|++.+.+++.+. +..
T Consensus 232 ~g~~-~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~-~-~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~-----~~~ 300 (470)
T 3i6d_A 232 TGLQ-TLVEEIEKQLKL--TKVYKGTKVTKLSHSG-SC-Y-SLELDNGVTLDADSVIVTAPHKAAAGMLSEL-----PAI 300 (470)
T ss_dssp TCTH-HHHHHHHHTCCS--EEEECSCCEEEEEECS-SS-E-EEEESSSCEEEESEEEECSCHHHHHHHTTTS-----TTH
T ss_pred ChHH-HHHHHHHHhcCC--CEEEeCCceEEEEEcC-Ce-E-EEEECCCCEEECCEEEECCCHHHHHHHcCCc-----hhh
Confidence 7754 677777765543 7999999999999886 34 3 35554 4489999999999999999888664 234
Q ss_pred HhhccCcceeeEEEEEEeccCCCCCCC--CceeeccCCCcc--ceeeeccccccccCCCCCeEEEEEecCC--CCCCCCC
Q 009508 326 LKVLNLASIDVVSVKLWFDKKVTVPNV--SNACSGFGDSLA--WTFFDLNKIYDEHKDDSATVIQADFYHA--NELMPLK 399 (533)
Q Consensus 326 ~~~~~l~~~~~~~v~l~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~ 399 (533)
..+..+.+.++.++.+.|+.++|.... ...+........ ...++ +...+...+.+..++.+.+... ..+..++
T Consensus 301 ~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~ 379 (470)
T 3i6d_A 301 SHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWT-NKKWPHAAPEGKTLLRAYVGKAGDESIVDLS 379 (470)
T ss_dssp HHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEH-HHHCGGGSCTTCEEEEEEECCSSCCGGGTSC
T ss_pred HHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEE-cCcCCCcCCCCCEEEEEEECCCCCccccCCC
Confidence 567888899999999999998874321 112221111110 01121 1111223334444444433222 3355788
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccC----CCCCCCCCceEEecccccCCCCCchhhHH
Q 009508 400 DDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYM----MRGFTSFPNLFMAGDWITTRHGSWSQERS 475 (533)
Q Consensus 400 ~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~----p~~~~~~~~l~~aG~~~~~g~~~~~iegA 475 (533)
++++.+.++++|.++||.. .++....+.+|+++++.+.+|+.... +....+.+|||+||+|+.. .++++|
T Consensus 380 ~~~~~~~~~~~l~~~~g~~--~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g----~gv~~a 453 (470)
T 3i6d_A 380 DNDIINIVLEDLKKVMNIN--GEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEG----VGIPDC 453 (470)
T ss_dssp HHHHHHHHHHHHGGGSCCC--SCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC----CSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCC--CCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC----CCHHHH
Confidence 9999999999999999863 35667788899999999999864321 1222356899999998842 469999
Q ss_pred HHHHHHHHHHHHHHh
Q 009508 476 YVTGLEAANRVVDYL 490 (533)
Q Consensus 476 ~~SG~~aA~~Il~~~ 490 (533)
+.||+++|++|++.+
T Consensus 454 ~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 454 IDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999876
No 8
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=4.3e-32 Score=279.19 Aligned_cols=419 Identities=16% Similarity=0.176 Sum_probs=254.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC----------CcccccccccCCCcHHHHHHHhCCCCCCcc
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP----------DDISMQGFWYPFRNIFSLVDELGIKPFTGW 115 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~----------~~~G~~~~~~~~~~~~~~~~~lg~~~~~~~ 115 (533)
.++||+|||||++||+||++|+++|++|+|||+++++||+ ++.|.+.+....+.+.++++++|+.....+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFERY 83 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCcccccc
Confidence 4679999999999999999999999999999999999999 356666666556678899999998843333
Q ss_pred ccc-cee-cCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCC--chhhhccCCccHHHHH
Q 009508 116 MKS-AQY-SEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNT--DVAWRKYDSITARELF 191 (533)
Q Consensus 116 ~~~-~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~l 191 (533)
... ..+ ..++..+... . .++ ++.......+. ........+...+..... ......++..|+.+|+
T Consensus 84 ~~~~~~~~~~~g~~~~~~--~---~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 152 (453)
T 2yg5_A 84 REGESVYISSAGERTRYT--G---DSF-PTNETTKKEMD-----RLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWL 152 (453)
T ss_dssp CCSEEEEECTTSCEEEEC--S---SSC-SCCHHHHHHHH-----HHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHH
T ss_pred cCCCEEEEeCCCceeecc--C---CCC-CCChhhHHHHH-----HHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHH
Confidence 221 122 2213222110 0 011 01100000000 000000111111110000 0112335678999999
Q ss_pred HHhCCCHHHHHHHHHHHHHhhccCCch-hhhHHHHHHHHHHHH----HhhcCCcceeeecCCcchhhHHHHHHHHHhcCC
Q 009508 192 KQFGCSERLYRNVIGPLVQVGLFAPAE-QCSAAATLGILYFII----LAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGC 266 (533)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~G~ 266 (533)
++.+.++. ...++.+++...++.++. ++++...+..+.... ..........++.||++ .+++.|++.+ |+
T Consensus 153 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l---g~ 227 (453)
T 2yg5_A 153 INQSDDAE-ARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQ-QVSIRMAEAL---GD 227 (453)
T ss_dssp HHHCSCHH-HHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTH-HHHHHHHHHH---GG
T ss_pred HhhcCCHH-HHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChH-HHHHHHHHhc---CC
Confidence 98876554 466777776667777888 888876544332110 00000011245678865 7888777554 78
Q ss_pred EEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEEeccC
Q 009508 267 EFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKK 346 (533)
Q Consensus 267 ~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~ 346 (533)
+|++|++|++|..++ +..+.|.++++++.||+||+|+|+..+.+++..++.+ ....+.++.+...+..++.+.|+.+
T Consensus 228 ~i~~~~~V~~i~~~~--~~~v~v~~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp-~~~~~~i~~~~~~~~~kv~l~~~~~ 304 (453)
T 2yg5_A 228 DVFLNAPVRTVKWNE--SGATVLADGDIRVEASRVILAVPPNLYSRISYDPPLP-RRQHQMHQHQSLGLVIKVHAVYETP 304 (453)
T ss_dssp GEECSCCEEEEEEET--TEEEEEETTTEEEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHGGGEEECCEEEEEEEESSC
T ss_pred cEEcCCceEEEEEeC--CceEEEEECCeEEEcCEEEEcCCHHHHhcCEeCCCCC-HHHHHHHhcCCCcceEEEEEEECCC
Confidence 999999999999876 4413366677889999999999999888776443221 1223457777777888999999998
Q ss_pred CCCCCCCc-eeeccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCCcc
Q 009508 347 VTVPNVSN-ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATV 423 (533)
Q Consensus 347 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v 423 (533)
+|...... .+...+....+ .++.+.. ++...++.....+ ...+..++++++.+.++++|+++||.-. .++
T Consensus 305 ~w~~~~~~g~~~~~~~~~~~-~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~-~~p 377 (453)
T 2yg5_A 305 FWREDGLSGTGFGASEVVQE-VYDNTNH-----EDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKA-EEP 377 (453)
T ss_dssp GGGGGTEEEEEECTTSSSCE-EEECCCT-----TCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGG-GCC
T ss_pred CCCCCCCCceeecCCCCeEE-EEeCCCC-----CCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccC-CCc
Confidence 76433211 11111112222 2332211 1112333222221 1234456789999999999999997521 234
Q ss_pred ccceeeeCCC------Cc-cccCCCccc-cCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHHhC
Q 009508 424 MDHKIRRFPK------SL-THFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 491 (533)
Q Consensus 424 ~~~~~~r~~~------~~-~~~~pg~~~-~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~~g 491 (533)
......+|.. ++ +.+.||... ..+...+|++||||||++++..++ ++++||+.||++||++|++.++
T Consensus 378 ~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~-g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 378 VVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGY-QHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp SEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTT-TSHHHHHHHHHHHHHHHHHHC-
T ss_pred cEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccc-cchHHHHHHHHHHHHHHHHHhc
Confidence 4444455542 11 234666422 234567789999999999987777 7999999999999999998875
No 9
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=9.5e-32 Score=278.25 Aligned_cols=419 Identities=15% Similarity=0.146 Sum_probs=267.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCCCCCCCC----------CcccccccccCCCcHHHHHHHhCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDGNGFGSP----------DDISMQGFWYPFRNIFSLVDELGIKPFT 113 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G--~~V~vlE~~~~~GG~----------~~~G~~~~~~~~~~~~~~~~~lg~~~~~ 113 (533)
+++||+|||||++||++|++|+++| ++|+|||+++++||+ ++.|.+.+...++.+.++++++|++...
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 4689999999999999999999999 999999999999997 4667777777788899999999998433
Q ss_pred ccc--ccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHH
Q 009508 114 GWM--KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELF 191 (533)
Q Consensus 114 ~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 191 (533)
... ...++..++.....+.. ....++..+.. +.....+...+++ .+....... ........+..++.+|+
T Consensus 83 ~~~~~~~~~~~~~g~~~~~p~~-~~~~~p~~~~~--~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~s~~~~l 154 (475)
T 3lov_A 83 VRNNTSQAFILDTGGLHPIPKG-AVMGIPTDLDL--FRQTTLLTEEEKQ----EVADLLLHP-SDSLRIPEQDIPLGEYL 154 (475)
T ss_dssp EECCCCCEEEEETTEEEECCSS-EETTEESCHHH--HTTCSSSCHHHHH----HHHHHHHSC-CTTCCCCSSCCBHHHHH
T ss_pred eecCCCceEEEECCEEEECCCc-ccccCcCchHH--HhhccCCChhHHH----HhhCcccCC-cccccCCCCCcCHHHHH
Confidence 221 11222223322221100 00001111100 1111223333332 111111100 00111245678999999
Q ss_pred HHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhh----------c--------------CCcceeeecC
Q 009508 192 KQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH----------Q--------------KNFDLVWCRG 247 (533)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~----------~--------------~~~~~~~~~g 247 (533)
++. +..+..+.++.+++...++.+++++++......+..+.... . ....+..+++
T Consensus 155 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (475)
T 3lov_A 155 RPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLET 233 (475)
T ss_dssp HHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETT
T ss_pred HHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCC
Confidence 874 56888899999999999999998888654333332211000 0 1223445678
Q ss_pred CcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHh
Q 009508 248 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLK 327 (533)
Q Consensus 248 ~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~ 327 (533)
|+. .+++.|++.+.+ ++|++|++|++|+.++ +.+ .|++.++++.||+||+|+|++.+.+++++.+. ..
T Consensus 234 G~~-~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~ad~vV~a~p~~~~~~ll~~~~~------~~ 301 (475)
T 3lov_A 234 GLE-SLIERLEEVLER--SEIRLETPLLAISRED--GRY-RLKTDHGPEYADYVLLTIPHPQVVQLLPDAHL------PE 301 (475)
T ss_dssp CHH-HHHHHHHHHCSS--CEEESSCCCCEEEEET--TEE-EEECTTCCEEESEEEECSCHHHHHHHCTTSCC------HH
T ss_pred hHH-HHHHHHHhhccC--CEEEcCCeeeEEEEeC--CEE-EEEECCCeEECCEEEECCCHHHHHHHcCccCH------HH
Confidence 765 677777766644 7999999999999876 443 36665558999999999999999999876421 56
Q ss_pred hccCcceeeEEEEEEeccCCCCCCC-CceeeccCCCcc--ceeeeccccccccCCCCCeEEEEEec--CCCCCCCCCHHH
Q 009508 328 VLNLASIDVVSVKLWFDKKVTVPNV-SNACSGFGDSLA--WTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQ 402 (533)
Q Consensus 328 ~~~l~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~e 402 (533)
+..+.+.++.++.+.|+.+++.+.. ...+....+... ...++ +...+...++ ..++...+. ....+...++++
T Consensus 302 ~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~ 379 (475)
T 3lov_A 302 LEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEV 379 (475)
T ss_dssp HHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHH
T ss_pred HhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHH
Confidence 7888889999999999998732221 122222211111 01111 1111222222 333333222 123455678999
Q ss_pred HHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccC----CCCCCCCCceEEecccccCCCCCchhhHHHHH
Q 009508 403 VVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYM----MRGFTSFPNLFMAGDWITTRHGSWSQERSYVT 478 (533)
Q Consensus 403 i~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~----p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~S 478 (533)
+.+.++++|.++||.. ..+....+.+|+++.+.+.+|+.... +...++.+|||+||+++.. .+|++|+.|
T Consensus 380 ~~~~~~~~L~~~~g~~--~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g----~g~~~a~~s 453 (475)
T 3lov_A 380 LQQAVLQDLEKICGRT--LEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG----VGLPDCVAS 453 (475)
T ss_dssp HHHHHHHHHHHHHSSC--CCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC----SSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC----CCHHHHHHH
Confidence 9999999999999853 35677788899999999999874321 1122356899999998852 469999999
Q ss_pred HHHHHHHHHHHhCCC
Q 009508 479 GLEAANRVVDYLGDG 493 (533)
Q Consensus 479 G~~aA~~Il~~~g~~ 493 (533)
|+++|++|++.++..
T Consensus 454 G~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 454 AKTMIESIELEQSHT 468 (475)
T ss_dssp HHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999998753
No 10
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=4.3e-32 Score=283.84 Aligned_cols=414 Identities=14% Similarity=0.135 Sum_probs=261.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHH-CCCeEEEEcCCCCCCCC-----------CcccccccccCCCcHHHHHHHhCCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSK-QGFDVTVLDDGNGFGSP-----------DDISMQGFWYPFRNIFSLVDELGIKP 111 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~-~G~~V~vlE~~~~~GG~-----------~~~G~~~~~~~~~~~~~~~~~lg~~~ 111 (533)
+++.+||||||||++||+||++|++ .|++|+|||+++++||+ +|.|+|.++..++.+.+++++++...
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~ 86 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKE 86 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSG
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCcc
Confidence 3556899999999999999999998 49999999999999998 57788999888889999999987653
Q ss_pred CC--cccccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcc-hhhHHhhcCCCCchhhhccCCccHH
Q 009508 112 FT--GWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSL-PLMAAVIDFDNTDVAWRKYDSITAR 188 (533)
Q Consensus 112 ~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~ 188 (533)
.. .......+..+|..+.+|+.. ....++........ .++.... ..........+++
T Consensus 87 ~~~~~~~~~~~i~~~g~~~~~p~~~---------------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~ 146 (513)
T 4gde_A 87 DDWYTHQRISYVRCQGQWVPYPFQN---------------NISMLPKEEQVKCIDGMIDAAL-----EARVANTKPKTFD 146 (513)
T ss_dssp GGEEEEECCEEEEETTEEEESSGGG---------------GGGGSCHHHHHHHHHHHHHHHH-----HHHTCCSCCCSHH
T ss_pred ceeEEecCceEEEECCeEeecchhh---------------hhhhcchhhHHHHHHHHHHHHH-----hhhcccccccCHH
Confidence 21 112222233344433332110 01111111111111 1111100 0111233557889
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHH---------HHHHHHhhc-----CCcceeee-cCCcchhh
Q 009508 189 ELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGI---------LYFIILAHQ-----KNFDLVWC-RGTLREKI 253 (533)
Q Consensus 189 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~---------~~~~~~~~~-----~~~~~~~~-~g~~~~~l 253 (533)
+|+.+. +.+.+.+.++.++....++.++.++++.+.... ......... ......++ +||++ .+
T Consensus 147 ~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l 224 (513)
T 4gde_A 147 EWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTG-GI 224 (513)
T ss_dssp HHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHH-HH
T ss_pred HHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHH-HH
Confidence 988753 458888899999999999998888776532111 111111111 11122334 57754 89
Q ss_pred HHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcc
Q 009508 254 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 333 (533)
Q Consensus 254 ~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~ 333 (533)
+++|++.+++.|++|++|++|++|..++ +.+ +..+++++.||+||+|+|...+.+++... +.......+.+
T Consensus 225 ~~~l~~~l~~~g~~i~~~~~V~~I~~~~--~~v--~~~~G~~~~ad~vI~t~P~~~l~~~l~~~-----~~~~~~~~l~y 295 (513)
T 4gde_A 225 WIAVANTLPKEKTRFGEKGKVTKVNANN--KTV--TLQDGTTIGYKKLVSTMAVDFLAEAMNDQ-----ELVGLTKQLFY 295 (513)
T ss_dssp HHHHHHTSCGGGEEESGGGCEEEEETTT--TEE--EETTSCEEEEEEEEECSCHHHHHHHTTCH-----HHHHHHTTCCE
T ss_pred HHHHHHHHHhcCeeeecceEEEEEEccC--CEE--EEcCCCEEECCEEEECCCHHHHHHhcCch-----hhHhhhhcccC
Confidence 9999999999999999999999999875 543 34566799999999999999999888753 23345677888
Q ss_pred eeeEEEEEEeccCCCCCCC--CceeeccCCCccceeeeccccccccCCCCCe-EEEEEe---------------------
Q 009508 334 IDVVSVKLWFDKKVTVPNV--SNACSGFGDSLAWTFFDLNKIYDEHKDDSAT-VIQADF--------------------- 389 (533)
Q Consensus 334 ~~~~~v~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~--------------------- 389 (533)
.++..+.+.++........ ...++.-..........+.+..+...+.+.. +....+
T Consensus 296 ~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (513)
T 4gde_A 296 SSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIML 375 (513)
T ss_dssp EEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEE
T ss_pred CceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEe
Confidence 8888888887765432111 1111110000001111111111111111111 111111
Q ss_pred -cCCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCCCC--CCCceEEecccccCC
Q 009508 390 -YHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFT--SFPNLFMAGDWITTR 466 (533)
Q Consensus 390 -~~~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~~~--~~~~l~~aG~~~~~g 466 (533)
....++..++++++++.++++|.++.+....+.++..++.||++++|.+..|+...+...+. ..+|||++|.+....
T Consensus 376 ~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~~~l~~~GR~g~~~ 455 (513)
T 4gde_A 376 EVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWR 455 (513)
T ss_dssp EEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTEEECSTTTTCC
T ss_pred cccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhhcCcEEecCCcccC
Confidence 11244556889999999999999998755556788899999999999999987543221111 126999999876433
Q ss_pred CCCchhhHHHHHHHHHHHHHHH
Q 009508 467 HGSWSQERSYVTGLEAANRVVD 488 (533)
Q Consensus 467 ~~~~~iegA~~SG~~aA~~Il~ 488 (533)
+..+.|++|+.+|+.||+.|++
T Consensus 456 Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 456 YEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp GGGCSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHc
Confidence 3214799999999999999997
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=2.1e-31 Score=277.80 Aligned_cols=418 Identities=15% Similarity=0.124 Sum_probs=262.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC----------CcccccccccCCCcHHHHHHHhCCCCCCcc
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP----------DDISMQGFWYPFRNIFSLVDELGIKPFTGW 115 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~----------~~~G~~~~~~~~~~~~~~~~~lg~~~~~~~ 115 (533)
+.+||+|||||++||+||+.|+++|++|+|+|+++++||+ ++.|.+.+...++.+.++++++|+.....+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~~~ 91 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQF 91 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccccee
Confidence 3579999999999999999999999999999999999998 577888887777789999999998743222
Q ss_pred cc---cceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHHH
Q 009508 116 MK---SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFK 192 (533)
Q Consensus 116 ~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 192 (533)
.. ..++..+|..+..+ ..... +.....+...+++.... ..+............+..|+.+|++
T Consensus 92 ~~~~~~~~~~~~g~~~~~p---------~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~l~ 157 (504)
T 1sez_A 92 PLSQNKRYIARNGTPVLLP---------SNPID--LIKSNFLSTGSKLQMLL---EPILWKNKKLSQVSDSHESVSGFFQ 157 (504)
T ss_dssp CSSCCCEEEESSSSEEECC---------SSHHH--HHHSSSSCHHHHHHHHT---HHHHC----------CCCBHHHHHH
T ss_pred ccCCCceEEEECCeEEECC---------CCHHH--HhccccCCHHHHHHHhH---hhhccCcccccccCCCCccHHHHHH
Confidence 11 12223333322211 11000 01111122222221110 0000000000001234589999998
Q ss_pred HhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhh-----------c------------------CCccee
Q 009508 193 QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH-----------Q------------------KNFDLV 243 (533)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~-----------~------------------~~~~~~ 243 (533)
+. ++++..+.++.+++...++.+++++++...+..++...... . ......
T Consensus 158 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (504)
T 1sez_A 158 RH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSF 236 (504)
T ss_dssp HH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCB
T ss_pred HH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceE
Confidence 75 56888899999998888999999998765543333221100 0 011244
Q ss_pred eecCCcchhhHHHHHHHHHhcC-CEEEcCceeeEEEeccCCc------eEEEEEeC-C---eeeecCEEEEccChhhHHH
Q 009508 244 WCRGTLREKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERC------CISDVVCG-K---ETYSAGAVVLAVGISTLQE 312 (533)
Q Consensus 244 ~~~g~~~~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~~------~v~~v~~~-~---~~~~ad~VV~a~~~~~~~~ 312 (533)
+++||++ .|+++|++. ++ ++|++|++|++|..++ ++ ..+.+.++ + +++.||+||+|+|+..+.+
T Consensus 237 ~~~GG~~-~l~~~l~~~---l~~~~i~~~~~V~~I~~~~-~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ 311 (504)
T 1sez_A 237 SFLGGMQ-TLTDAICKD---LREDELRLNSRVLELSCSC-TEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKS 311 (504)
T ss_dssp EETTCTH-HHHHHHHTT---SCTTTEETTCCEEEEEEEC-SSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHT
T ss_pred eeCcHHH-HHHHHHHhh---cccceEEcCCeEEEEEecC-CCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHH
Confidence 5678865 677777743 45 7899999999999876 34 22223322 3 4789999999999999998
Q ss_pred hhhhcc-ccCchhHHhhccCcceeeEEEEEEeccCCCCCC--CCceeeccCC-----CccceeeeccccccccCCCCCeE
Q 009508 313 LIKNSI-LCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN--VSNACSGFGD-----SLAWTFFDLNKIYDEHKDDSATV 384 (533)
Q Consensus 313 ll~~~~-~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v 384 (533)
++.+.. .+..+ ..+..+.+.++.++.+.|+.++|... .+..++...+ ......+. +...+...+++..+
T Consensus 312 ll~~~~~~~~~~--~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~-s~~~~~~~p~g~~~ 388 (504)
T 1sez_A 312 MKIAKRGNPFLL--NFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFS-SMMFPDRAPNNVYL 388 (504)
T ss_dssp SEEESSSSBCCC--TTSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEH-HHHCGGGSCTTEEE
T ss_pred HhhcccCCcccH--HHHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEee-ccccCCcCCCCCEE
Confidence 874210 00111 12566777788899999998875422 1222221111 00011121 12223333334444
Q ss_pred EEEEecC--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCC---CCCCCCCceEEe
Q 009508 385 IQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMM---RGFTSFPNLFMA 459 (533)
Q Consensus 385 ~~~~~~~--~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p---~~~~~~~~l~~a 459 (533)
+.....+ ...+..++++++.+.++++|++++|.. .++....+.+|+++++.+.+|+....+ ...++++|||||
T Consensus 389 l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~--~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~a 466 (504)
T 1sez_A 389 YTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAE--GEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYA 466 (504)
T ss_dssp EEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBC--SCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEEC
T ss_pred EEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEE
Confidence 3322222 234566789999999999999999863 356777788899888999888643221 123467899999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHHHHHhCC
Q 009508 460 GDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 492 (533)
Q Consensus 460 G~~~~~g~~~~~iegA~~SG~~aA~~Il~~~g~ 492 (533)
|++++ | .++++|+.||++||++|++.++.
T Consensus 467 G~~~~-g---~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 467 GNHRG-G---LSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp CSSSS-C---SSHHHHHHHHHHHHHHHHHHHSS
T ss_pred eecCC-C---CCHHHHHHHHHHHHHHHHHHHhh
Confidence 99985 2 57999999999999999999875
No 12
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.98 E-value=7.2e-31 Score=273.60 Aligned_cols=423 Identities=14% Similarity=0.110 Sum_probs=202.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC----------CcccccccccCCCcHHHHHHHhCCCC--CCc
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP----------DDISMQGFWYPFRNIFSLVDELGIKP--FTG 114 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~----------~~~G~~~~~~~~~~~~~~~~~lg~~~--~~~ 114 (533)
+++|||||||++||+||++|+++|++|+|||+++++||+ +|.|.+.+... ..+.++++.+|... ...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~~-~~~~~l~~~~g~~~~~~~~ 79 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITDP-SAIEELFALAGKQLKEYVE 79 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBSCT-HHHHHHHHTTTCCGGGTCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeecCc-hhHHHHHHHhcchhhhcee
Confidence 478999999999999999999999999999999999998 56777765431 23456777777542 112
Q ss_pred ccc----cceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCC-----C----C------
Q 009508 115 WMK----SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD-----N----T------ 175 (533)
Q Consensus 115 ~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~----~------ 175 (533)
+.. ...+..+|..+..+. +...+...+ ..+..-.......+........... . .
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l-----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (501)
T 4dgk_A 80 LLPVTPFYRLCWESGKVFNYDN--DQTRLEAQI-----QQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLR 152 (501)
T ss_dssp EEEESSSEEEEETTSCEEEECS--CHHHHHHHH-----HHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHH
T ss_pred eEecCcceEEEcCCCCEEEeec--cHHHHHHHH-----hhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhh
Confidence 111 112223443322110 000000000 0000000000000000011100000 0 0
Q ss_pred -chhhhcc-CCccHHHHHHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhhcCCcceeeecCCcchhh
Q 009508 176 -DVAWRKY-DSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKI 253 (533)
Q Consensus 176 -~~~~~~~-~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l 253 (533)
...+..+ ...++.+++.++. .++.+..++.... ...+..+...++...+ +... ......++++||++ .|
T Consensus 153 ~~~~~~~l~~~~~~~~~~~~~~-~~~~l~~~l~~~~-~~~g~~p~~~~~~~~~--~~~~----~~~~G~~~p~GG~~-~l 223 (501)
T 4dgk_A 153 AAPQLAKLQAWRSVYSKVASYI-EDEHLRQAFSFHS-LLVGGNPFATSSIYTL--IHAL----EREWGVWFPRGGTG-AL 223 (501)
T ss_dssp SGGGTTTSHHHHHHHHHHHTTC-CCHHHHHHHHHHH-HHHHSCC--CCCTHHH--HHHH----HSCCCEEEETTHHH-HH
T ss_pred hhhhhhhhhhcccHHHHHHHHh-ccHHHHhhhhhhh-cccCCCcchhhhhhhh--hhhh----hccCCeEEeCCCCc-ch
Confidence 0000000 0124555666543 3333344443322 2233344443332111 1111 11233457889865 89
Q ss_pred HHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHH-HhhhhccccCchhHHhhccC
Q 009508 254 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ-ELIKNSILCNREEFLKVLNL 331 (533)
Q Consensus 254 ~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~-~ll~~~~~~~~~~~~~~~~l 331 (533)
+++|++.++++|++|++|++|++|..++ +++++|++. ++++.||.||++++++.+. .|++..+.+ ....+.++..
T Consensus 224 ~~aL~~~~~~~Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~-~~~~~~~~~~ 300 (501)
T 4dgk_A 224 VQGMIKLFQDLGGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA-VKQSNKLQTK 300 (501)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC--------------------------
T ss_pred HHHHHHHHHHhCCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc-hhhhhhhhcc
Confidence 9999999999999999999999999987 888888875 5689999999999888764 566554322 1222334444
Q ss_pred cce-eeEEEEEEeccCCCCCCCCceeeccCC-------------Ccc-cee-eeccccccccCCCCCeEEEE-EecCCCC
Q 009508 332 ASI-DVVSVKLWFDKKVTVPNVSNACSGFGD-------------SLA-WTF-FDLNKIYDEHKDDSATVIQA-DFYHANE 394 (533)
Q Consensus 332 ~~~-~~~~v~l~~~~~~~~~~~~~~~~~~~~-------------~~~-~~~-~~~~~~~~~~~~~~~~v~~~-~~~~~~~ 394 (533)
... +..++++.++.+......+.++++.+. ... ..+ ..++..++.+.+.+.+.+.+ ...+...
T Consensus 301 ~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~ 380 (501)
T 4dgk_A 301 RMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLG 380 (501)
T ss_dssp --CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTT
T ss_pred ccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccc
Confidence 443 456778888876643333333332110 000 111 12233455666666665433 2222222
Q ss_pred CCC----CCHHHHHHHHHHHHhhh-hcCCCCCccccceeeeCCC-----------CccccCCC--c-cccCCCC-CCCCC
Q 009508 395 LMP----LKDDQVVAKAVSYLSKC-IKDFSTATVMDHKIRRFPK-----------SLTHFFPG--S-YKYMMRG-FTSFP 454 (533)
Q Consensus 395 ~~~----~~~~ei~~~~~~~l~~~-~p~~~~~~v~~~~~~r~~~-----------~~~~~~pg--~-~~~~p~~-~~~~~ 454 (533)
..+ ..++++.+++++.|++. +|++++ .++...+. .|. +.+...+. + ...+|.. .++++
T Consensus 381 ~~~~~~~~~~~~~~~~vl~~l~~~~~P~~~~-~i~~~~~~-tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~ 458 (501)
T 4dgk_A 381 TANLDWTVEGPKLRDRIFAYLEQHYMPGLRS-QLVTHRMF-TPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTIT 458 (501)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHTCTTHHH-HEEEEEEE-CTTTTC------------------------------CCT
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhCCChHH-ceEEEEEC-CHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCC
Confidence 222 22467788888889875 488764 44444333 121 22222221 1 1134543 47899
Q ss_pred ceEEecccccCCCCCchhhHHHHHHHHHHHHHHHHhCCCC
Q 009508 455 NLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGS 494 (533)
Q Consensus 455 ~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~~g~~~ 494 (533)
|||+||+++++| ++++||+.||+.||+.|++++-.++
T Consensus 459 gLyl~G~~t~pG---~Gv~ga~~SG~~aA~~il~dL~gG~ 495 (501)
T 4dgk_A 459 NLYLVGAGTHPG---AGIPGVIGSAKATAGLMLEDLIGGS 495 (501)
T ss_dssp TEEECCCH---------HHHHHHHHHHHHHHHHHHHC---
T ss_pred CEEEECCCCCCc---ccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999765 4799999999999999999996544
No 13
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.97 E-value=1.6e-29 Score=261.00 Aligned_cols=413 Identities=13% Similarity=0.148 Sum_probs=236.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCCCCC----------Cccccccccc----CCCcHHHHHHH-hCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNGFGSP----------DDISMQGFWY----PFRNIFSLVDE-LGI 109 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~~~GG~----------~~~G~~~~~~----~~~~~~~~~~~-lg~ 109 (533)
..+||+|||||++||++|+.|+++|+ +|+|+|+++++||+ +|.|++++.+ ..+.+.+++++ +|+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl 82 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKL 82 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCC
Confidence 45799999999999999999999999 89999999999998 5778888763 34678899999 898
Q ss_pred CCCCc-ccc--cceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCcc
Q 009508 110 KPFTG-WMK--SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSIT 186 (533)
Q Consensus 110 ~~~~~-~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 186 (533)
..... +.. ...+..+|..+..+ .....+... ..+ ..+......... . ...++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~g~~~~~~-----------~~~~~~~~~------~~~--~~~~~~~~~~~~-~---~~~~~~s 139 (472)
T 1b37_A 83 RNFRSDFDYLAQNVYKEDGGVYDED-----------YVQKRIELA------DSV--EEMGEKLSATLH-A---SGRDDMS 139 (472)
T ss_dssp CEEECCCTTGGGCEECSSSSBCCHH-----------HHHHHHHHH------HHH--HHHHHHHHHTSC-T---TCTTCCB
T ss_pred ceeeccCccccceeEcCCCCCCCHH-----------HHHHHHHHH------HHH--HHHHHHHHHhhc-c---ccchhhh
Confidence 74221 111 11222223211100 000000000 000 000000000000 0 1224445
Q ss_pred HHH--HHHHhCC--CHHHHHHHHHHHHH-hhccCCchhhhHHHHHHHHHHHHHhhcCCcceeeecCCcchhhHHHHHHHH
Q 009508 187 ARE--LFKQFGC--SERLYRNVIGPLVQ-VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSM 261 (533)
Q Consensus 187 ~~~--~l~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~l 261 (533)
+.+ ++.+... .......++..+.. ..++.+....+....... ..+ ........+.+..||+. .+++.|++.+
T Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~-~~~~~~~~~~~~~gG~~-~l~~~l~~~l 216 (472)
T 1b37_A 140 ILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATF-SDFGDDVYFVADQRGYE-AVVYYLAGQY 216 (472)
T ss_dssp HHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHH-HHHCSEEEEECCTTCTT-HHHHHHHHTT
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-ccc-cccCCceeeeecCCcHH-HHHHHHHHhc
Confidence 443 4443221 11112333333331 122333333332111000 000 01111112222357765 7888888877
Q ss_pred Hhc--------CCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHHHhhhhccccCch-hHHhhccC
Q 009508 262 RTR--------GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNRE-EFLKVLNL 331 (533)
Q Consensus 262 ~~~--------G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~-~~~~~~~l 331 (533)
.+. |++|++|++|++|..++ +.+. |++. +++++||+||+|+|++.+.+++....++.++ ..+.++.+
T Consensus 217 ~~~~~~~~~i~~~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~ 293 (472)
T 1b37_A 217 LKTDDKSGKIVDPRLQLNKVVREIKYSP--GGVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQF 293 (472)
T ss_dssp SCBCTTTCCBCCTTEESSCCEEEEEECS--SCEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHS
T ss_pred cccccccccccccEEEcCCEEEEEEEcC--CcEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhc
Confidence 654 78999999999999876 4444 5554 4589999999999999988765432111222 34557888
Q ss_pred cceeeEEEEEEeccCCCCCCCCceeeccCC-Ccc-ceeeeccccccccCCCCCeEEEEEecCC--CCCCCCCHHHHHHHH
Q 009508 332 ASIDVVSVKLWFDKKVTVPNVSNACSGFGD-SLA-WTFFDLNKIYDEHKDDSATVIQADFYHA--NELMPLKDDQVVAKA 407 (533)
Q Consensus 332 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~ei~~~~ 407 (533)
...++.++.+.|+.++|.......+..+.. ... ...+. ...+. .+ ++.++...+.+. ..+..++++++.+.+
T Consensus 294 ~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~p-~~~~l~~~~~~~~a~~~~~~~~~e~~~~~ 369 (472)
T 1b37_A 294 DMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQ--EFEKQ-YP-DANVLLVTVTDEESRRIEQQSDEQTKAEI 369 (472)
T ss_dssp EEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEE--ECTTT-ST-TCCEEEEEEEHHHHHHHHTSCHHHHHHHH
T ss_pred CCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeee--cccCC-CC-CCCEEEEEechHHHHHHHhCCHHHHHHHH
Confidence 888888999999998875421111111110 100 01111 01111 12 334443333221 234456899999999
Q ss_pred HHHHhhhhcCCCCCccccceeeeC------CCCccccCCCccc-cCCCCCCCCCceEEecccccCCCCCchhhHHHHHHH
Q 009508 408 VSYLSKCIKDFSTATVMDHKIRRF------PKSLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGL 480 (533)
Q Consensus 408 ~~~l~~~~p~~~~~~v~~~~~~r~------~~~~~~~~pg~~~-~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~ 480 (533)
+++|+++||+....+++...+.+| .+++..+.||+.. ..+...+|++||||||++++++++ ++|+||+.||+
T Consensus 370 l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~-g~v~GA~~SG~ 448 (472)
T 1b37_A 370 MQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYN-GYVHGAYLSGI 448 (472)
T ss_dssp HHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTT-TSHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCC-CchhHHHHHHH
Confidence 999999998753223444444555 3344445666542 234456788999999999988777 79999999999
Q ss_pred HHHHHHHHHhCC
Q 009508 481 EAANRVVDYLGD 492 (533)
Q Consensus 481 ~aA~~Il~~~g~ 492 (533)
+||++|++.++.
T Consensus 449 ~aA~~i~~~l~~ 460 (472)
T 1b37_A 449 DSAEILINCAQK 460 (472)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999874
No 14
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.97 E-value=2.1e-29 Score=259.60 Aligned_cols=409 Identities=14% Similarity=0.101 Sum_probs=257.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCCCCCCC-----------CcccccccccCCCcHHHHHHHhCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDGNGFGSP-----------DDISMQGFWYPFRNIFSLVDELGIKPF 112 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G-~~V~vlE~~~~~GG~-----------~~~G~~~~~~~~~~~~~~~~~lg~~~~ 112 (533)
+.++||+|||||++||++|++|+++| .+|+|+|+++++||+ ++.|.+.+....+.+.++++++. +..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~~~ 85 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-QGW 85 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-SCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-hhh
Confidence 45689999999999999999999998 799999999999998 35566777666677888888874 322
Q ss_pred CcccccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcc-hhhHHhhcCCCCchhhhccCCccHHHHH
Q 009508 113 TGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSL-PLMAAVIDFDNTDVAWRKYDSITARELF 191 (533)
Q Consensus 113 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~l 191 (533)
........+..+|..+..|+... +..++...+.... .++..... ....+..|+++|+
T Consensus 86 ~~~~~~~~~~~~g~~~~~P~~~~---------------~~~l~~~~~~~~~~~ll~~~~~-------~~~~~~~s~~e~~ 143 (484)
T 4dsg_A 86 NVLQRESWVWVRGRWVPYPFQNN---------------IHRLPEQDRKRCLDELVRSHAR-------TYTEPPNNFEESF 143 (484)
T ss_dssp EEEECCCEEEETTEEEESSGGGC---------------GGGSCHHHHHHHHHHHHHHHHC-------CCSSCCSSHHHHH
T ss_pred hhccCceEEEECCEEEEeCccch---------------hhhCCHHHHHHHHHHHHHHHhc-------cCCCCCCCHHHHH
Confidence 22222222223443333321100 1112222221111 11111000 1224567999999
Q ss_pred HHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHH---------HHHHHHHHHhhc-----CCcceeeec-CCcchhhHHH
Q 009508 192 KQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAAT---------LGILYFIILAHQ-----KNFDLVWCR-GTLREKIFEP 256 (533)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---------~~~~~~~~~~~~-----~~~~~~~~~-g~~~~~l~~~ 256 (533)
.+. ++.++++.++.+++...|+.+++++++.+. ...+........ ....+.||. ||++ .++++
T Consensus 144 ~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~-~l~~~ 221 (484)
T 4dsg_A 144 TRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTG-IIYQA 221 (484)
T ss_dssp HHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTH-HHHHH
T ss_pred HHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHH-HHHHH
Confidence 875 568888888999999999999999887432 111121111111 122245565 7754 88888
Q ss_pred HHHHHHhcCCEEEcC--ceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccc-cCchhHHhhccCcc
Q 009508 257 WMDSMRTRGCEFLDG--RRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSIL-CNREEFLKVLNLAS 333 (533)
Q Consensus 257 l~~~l~~~G~~i~~~--~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~-~~~~~~~~~~~l~~ 333 (533)
|++.+.+. +|+++ ++|++|..++ +.+. ..+++++.||+||+|+|++.+.+++.+... ......+.+..+.+
T Consensus 222 la~~l~~~--~i~~~~~~~V~~I~~~~--~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y 295 (484)
T 4dsg_A 222 IKEKLPSE--KLTFNSGFQAIAIDADA--KTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVY 295 (484)
T ss_dssp HHHHSCGG--GEEECGGGCEEEEETTT--TEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCE
T ss_pred HHhhhhhC--eEEECCCceeEEEEecC--CEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCc
Confidence 88776442 79999 4699999876 4432 244568999999999999999999865111 11233345788899
Q ss_pred eeeEEEEEEeccCCCC--CCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 009508 334 IDVVSVKLWFDKKVTV--PNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYL 411 (533)
Q Consensus 334 ~~~~~v~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ei~~~~~~~l 411 (533)
.++.++.+.++.+... ...+.+++.-.+.....+...++..+...+++.+++...+... .....+++++++.++++|
T Consensus 296 ~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~-~~~~~~d~~l~~~a~~~L 374 (484)
T 4dsg_A 296 SSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES-KYKPVNHSTLIEDCIVGC 374 (484)
T ss_dssp EEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB-TTBCCCTTSHHHHHHHHH
T ss_pred CceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC-cCCcCCHHHHHHHHHHHH
Confidence 9999999999887421 1223233221111111122233334444445555554443322 444578999999999999
Q ss_pred hhhhcCCCC-CccccceeeeCCCCccccCCCccccCCCCC---CCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHH
Q 009508 412 SKCIKDFST-ATVMDHKIRRFPKSLTHFFPGSYKYMMRGF---TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 487 (533)
Q Consensus 412 ~~~~p~~~~-~~v~~~~~~r~~~~~~~~~pg~~~~~p~~~---~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il 487 (533)
.++. .+.+ +.+...++.||++++|.+.+|+...+...+ ... ||+++|.+....+++..|++|+.||++||+.|+
T Consensus 375 ~~~~-~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 375 LASN-LLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHTT-SCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred HHcC-CCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 9985 3332 234556788999999999999754322111 123 999999977433321379999999999999996
No 15
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.96 E-value=1.6e-27 Score=243.47 Aligned_cols=393 Identities=15% Similarity=0.124 Sum_probs=225.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCC-------------cccccccccC-CCcHHHHHHHhCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD-------------DISMQGFWYP-FRNIFSLVDELGIKPF 112 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~-------------~~G~~~~~~~-~~~~~~~~~~lg~~~~ 112 (533)
++||||||||++||+||+.|+++|++|+|||+++++||+. +.|.+++... .+.+.++++++|++..
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 80 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTA 80 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeee
Confidence 3799999999999999999999999999999999999982 2334445444 6677888899998732
Q ss_pred Cccccc-cee-cCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCC----CchhhhccCCcc
Q 009508 113 TGWMKS-AQY-SEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDN----TDVAWRKYDSIT 186 (533)
Q Consensus 113 ~~~~~~-~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s 186 (533)
...... ..+ ..++. +. ...+..... ...+. .. ...+......+.. .......++ .+
T Consensus 81 ~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~--~~~~~-----~~--~~~l~~~~~~~~~~~~~~~~~~~~~d-~s 142 (431)
T 3k7m_X 81 AASEFTSFRHRLGPTA-VD-------QAFPIPGSE--AVAVE-----AA--TYTLLRDAHRIDLEKGLENQDLEDLD-IP 142 (431)
T ss_dssp ECCCCCEECCBSCTTC-CS-------SSSCCCGGG--HHHHH-----HH--HHHHHHHHTTCCTTTCTTSSSCGGGC-SB
T ss_pred ecCCCCcEEEEecCCe-ec-------CCCCCCHHH--HHHHH-----HH--HHHHHHHHHhcCCCCCccCcchhhhc-CC
Confidence 221111 111 11110 00 000000000 00000 00 0000000000000 001223345 88
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHH----H-hhcCCcceeeecCCcchhhHHHHHHHH
Q 009508 187 ARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----L-AHQKNFDLVWCRGTLREKIFEPWMDSM 261 (533)
Q Consensus 187 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~----~-~~~~~~~~~~~~g~~~~~l~~~l~~~l 261 (533)
+.+|+...+..+.. ..++.......++.+..+++.......+.... . ..... . ...+++. .+.+.+.
T Consensus 143 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~g~~-~l~~~~~--- 214 (431)
T 3k7m_X 143 LNEYVDKLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLD--E-VFSNGSA-DLVDAMS--- 214 (431)
T ss_dssp HHHHHHHHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCC--E-EETTCTH-HHHHHHH---
T ss_pred HHHHHHhcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchh--h-hcCCcHH-HHHHHHH---
Confidence 99999988766554 45566666677777888888765544332110 0 00000 1 2345533 3433332
Q ss_pred HhcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEE
Q 009508 262 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVK 340 (533)
Q Consensus 262 ~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~ 340 (533)
++.| +|++|++|++|+.++ ++ +. |++. +++++||+||+|+|+..+.++...++.+ ....+.+..+......++.
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~-~~-v~-v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~-~~~~~~~~~~~~~~~~kv~ 289 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSG-DV-VN-VTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP-ERRRSVIEEGHGGQGLKIL 289 (431)
T ss_dssp TTCS-CEESSCCEEEEECSS-SS-EE-EEETTSCCEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHHHHCCCCCEEEEE
T ss_pred hhCC-ceEeCCEEEEEEEcC-Ce-EE-EEECCCCEEEeCEEEEecCcchHhheeeCCCCC-HHHHHHHHhCCCcceEEEE
Confidence 4556 999999999999876 34 33 5554 4469999999999999887664333221 2223346666666778899
Q ss_pred EEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhhhhcCCCC
Q 009508 341 LWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFST 420 (533)
Q Consensus 341 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ei~~~~~~~l~~~~p~~~~ 420 (533)
+.++++++ . +++........+++.... ..++.++.....+. .+... ++ +.+.+.|++++|+..
T Consensus 290 ~~~~~~~~----~--i~~~~d~~~~~~~~~~~~-----~~~~~~l~~~~~g~-~~~~~-~~---~~~~~~l~~~~~~~~- 352 (431)
T 3k7m_X 290 IHVRGAEA----G--IECVGDGIFPTLYDYCEV-----SESERLLVAFTDSG-SFDPT-DI---GAVKDAVLYYLPEVE- 352 (431)
T ss_dssp EEEESCCT----T--EEEEBSSSSSEEEEEEEC-----SSSEEEEEEEEETT-TCCTT-CH---HHHHHHHHHHCTTCE-
T ss_pred EEECCCCc----C--ceEcCCCCEEEEEeCcCC-----CCCCeEEEEEeccc-cCCCC-CH---HHHHHHHHHhcCCCC-
Confidence 99988763 1 222222222223332211 02233333222222 23222 22 346677888888642
Q ss_pred CccccceeeeC------CCCccccCCCcc-ccCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHHh
Q 009508 421 ATVMDHKIRRF------PKSLTHFFPGSY-KYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 490 (533)
Q Consensus 421 ~~v~~~~~~r~------~~~~~~~~pg~~-~~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~~ 490 (533)
+......+| .+++..+.||+. ...+....|.++|||||++++..++ ++|+||+.||++||++|+...
T Consensus 353 --~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~-g~~~GA~~sg~raa~~i~~~~ 426 (431)
T 3k7m_X 353 --VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFP-GYIEGALETAECAVNAILHSH 426 (431)
T ss_dssp --EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSST-TSHHHHHHHHHHHHHHHHHC-
T ss_pred --ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCC-eEehHHHHHHHHHHHHHHhhh
Confidence 333333334 234455677763 3345556688999999999988787 899999999999999999753
No 16
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.95 E-value=4e-27 Score=245.00 Aligned_cols=421 Identities=16% Similarity=0.116 Sum_probs=230.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCC------------cccccccccCCCcHHHHHHHhCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD------------DISMQGFWYPFRNIFSLVDELGIKPF 112 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~------------~~G~~~~~~~~~~~~~~~~~lg~~~~ 112 (533)
..++||+|||||++||++|+.|+++|++|+|||+++++||++ +.|.+.+......+.++++++|+...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 346799999999999999999999999999999999999982 34556665556678899999998731
Q ss_pred --CcccccceecCCCceeccccc-ccCCCCCCCcccchhhhhcCCCHHhhhh--cchhhHHhhcCCCCchhhhccCCccH
Q 009508 113 --TGWMKSAQYSEEGLEVEFPIF-QDLNQLPTPLGTLFYTQFSRLPLVDRLT--SLPLMAAVIDFDNTDVAWRKYDSITA 187 (533)
Q Consensus 113 --~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~ 187 (533)
.......++..+|........ .....+...+. .........+... ..........+. .......++..++
T Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~ 185 (498)
T 2iid_A 111 EFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVK----PSEAGKSAGQLYEESLGKVVEELKRTN-CSYILNKYDTYST 185 (498)
T ss_dssp EECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCC----GGGTTCCHHHHHHHHTHHHHHHHHHSC-HHHHHHHHTTSBH
T ss_pred eecccCCccEEEeCCeeecccccccCccccccCCC----ccccCCCHHHHHHHHHHHHHHHHhhcc-HHHHHHHhhhhhH
Confidence 111112222222321110000 00000000000 0000000001000 000000000000 0111234577889
Q ss_pred HHHHHHhC-CCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhhcCCcceeeecCCcchhhHHHHHHHHHhcCC
Q 009508 188 RELFKQFG-CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGC 266 (533)
Q Consensus 188 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~G~ 266 (533)
.+|++..+ ++...... +..++.... ....+.... +..... .........+.||+. .|++.|++.+..
T Consensus 186 ~~~l~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~---~~~~~~-~~~~~~~~~~~gG~~-~l~~~l~~~l~~--- 253 (498)
T 2iid_A 186 KEYLIKEGDLSPGAVDM-IGDLLNEDS---GYYVSFIES---LKHDDI-FAYEKRFDEIVDGMD-KLPTAMYRDIQD--- 253 (498)
T ss_dssp HHHHHHTSCCCHHHHHH-HHHHTTCGG---GTTSBHHHH---HHHHHH-HTTCCCEEEETTCTT-HHHHHHHHHTGG---
T ss_pred HHHHHHccCCCHHHHHH-HHHhcCccc---chhHHHHHH---HHHHhc-cccCcceEEeCCcHH-HHHHHHHHhccc---
Confidence 99999865 44444332 211110000 001111111 111101 111123345678865 788888877653
Q ss_pred EEEcCceeeEEEeccCCceEEEEEeCCe----eeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEE
Q 009508 267 EFLDGRRVTDFIYDEERCCISDVVCGKE----TYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLW 342 (533)
Q Consensus 267 ~i~~~~~V~~I~~~~~~~~v~~v~~~~~----~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~ 342 (533)
+|++|++|++|..++ ++..+ ...+++ +++||+||+|+|+..+.++...++++ ....+.++.+.+.+..++.+.
T Consensus 254 ~i~~~~~V~~I~~~~-~~v~v-~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp-~~~~~ai~~l~~~~~~kv~l~ 330 (498)
T 2iid_A 254 KVHFNAQVIKIQQND-QKVTV-VYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLL-PKKAHALRSVHYRSGTKIFLT 330 (498)
T ss_dssp GEESSCEEEEEEECS-SCEEE-EEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEE
T ss_pred ccccCCEEEEEEECC-CeEEE-EEecCCcccceEEeCEEEECCChHHHhheecCCCCC-HHHHHHHHhCCCcceeEEEEE
Confidence 799999999999876 34322 222332 48999999999999776654333221 223345788999899999999
Q ss_pred eccCCCCCCCCc-eeeccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHHHHHHhhhhcCCC
Q 009508 343 FDKKVTVPNVSN-ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFS 419 (533)
Q Consensus 343 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~ei~~~~~~~l~~~~p~~~ 419 (533)
|+.++|...+.. .+...+....+.++. +. . .+.+..++.....+ ...+..++++++.+.++++|+++++. .
T Consensus 331 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~-s~---~-~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~-~ 404 (498)
T 2iid_A 331 CTTKFWEDDGIHGGKSTTDLPSRFIYYP-NH---N-FTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQL-P 404 (498)
T ss_dssp ESSCGGGGGTCCSSEEEESSTTCEEECC-SS---C-CTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTC-C
T ss_pred eCCCCccCCCccCCcccCCCCcceEEEC-CC---C-CCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCC-C
Confidence 999987432210 010001111222221 11 1 12223343332222 23455678999999999999999962 1
Q ss_pred CCcc----ccceeeeCCC------CccccCCCccc-cCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHH
Q 009508 420 TATV----MDHKIRRFPK------SLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 488 (533)
Q Consensus 420 ~~~v----~~~~~~r~~~------~~~~~~pg~~~-~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~ 488 (533)
...+ ....+.+|.. ++..+.|+... ..+....+.+||||||++++..+ ++|+||+.||++||++|++
T Consensus 405 ~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~--g~~~GAi~SG~raA~~i~~ 482 (498)
T 2iid_A 405 KKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH--GWIDSTIKSGLRAARDVNL 482 (498)
T ss_dssp HHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS--SCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC--cCHHHHHHHHHHHHHHHHH
Confidence 1111 1233445543 22223444321 12223456899999999997544 5899999999999999999
Q ss_pred HhCCC
Q 009508 489 YLGDG 493 (533)
Q Consensus 489 ~~g~~ 493 (533)
.++..
T Consensus 483 ~l~~~ 487 (498)
T 2iid_A 483 ASENP 487 (498)
T ss_dssp HHHCC
T ss_pred HhcCC
Confidence 99743
No 17
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.95 E-value=1.3e-27 Score=248.02 Aligned_cols=235 Identities=11% Similarity=0.114 Sum_probs=146.4
Q ss_pred eeeecCCcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCC---eeeecCEEEEccChhhHHHhhhhcc
Q 009508 242 LVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK---ETYSAGAVVLAVGISTLQELIKNSI 318 (533)
Q Consensus 242 ~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~---~~~~ad~VV~a~~~~~~~~ll~~~~ 318 (533)
...++||++ .|++.|++.+.+ ++|++|++|++|..++ +.+.....++ .+++||+||+|+|+..+.++....
T Consensus 231 ~~~~~gG~~-~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~l- 304 (489)
T 2jae_A 231 MFTPVGGMD-RIYYAFQDRIGT--DNIVFGAEVTSMKNVS--EGVTVEYTAGGSKKSITADYAICTIPPHLVGRLQNNL- 304 (489)
T ss_dssp EEEETTCTT-HHHHHHHHHHCG--GGEETTCEEEEEEEET--TEEEEEEEETTEEEEEEESEEEECSCHHHHTTSEECC-
T ss_pred EEeecCCHH-HHHHHHHHhcCC--CeEEECCEEEEEEEcC--CeEEEEEecCCeEEEEECCEEEECCCHHHHHhCccCC-
Confidence 345678865 788888876643 7899999999999876 4433222233 479999999999999888766421
Q ss_pred ccCchhHHhhccCcceeeEEEEEEeccCCCCCC-CCc-eeeccCCCccceeeeccccccccCCCCCeEEEEEecCC--CC
Q 009508 319 LCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-VSN-ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHA--NE 394 (533)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~ 394 (533)
.....+.+..+.+.+..++.+.|+.++|... ... .+...+......++ .+. .+..+.+.++.....+. ..
T Consensus 305 --~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~-~s~---~~~~~~~~l~~~~~~g~~~~~ 378 (489)
T 2jae_A 305 --PGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMF-PYD---HYNSDRGVVVAYYSSGKRQEA 378 (489)
T ss_dssp --CHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEEC-CSS---STTSSCEEEEEEEEETHHHHH
T ss_pred --CHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEe-CCC---CCCCCCCEEEEEeeCCchhhh
Confidence 1223345778888889999999999876322 110 01111111111111 111 11112333332212221 23
Q ss_pred CCCCCHHHHHHHHHHHHhhhhcC-CCCCccccceeeeCCCC------ccccC------CCccc-cCCCCCCCCCceEEec
Q 009508 395 LMPLKDDQVVAKAVSYLSKCIKD-FSTATVMDHKIRRFPKS------LTHFF------PGSYK-YMMRGFTSFPNLFMAG 460 (533)
Q Consensus 395 ~~~~~~~ei~~~~~~~l~~~~p~-~~~~~v~~~~~~r~~~~------~~~~~------pg~~~-~~p~~~~~~~~l~~aG 460 (533)
+..++++++.+.++++|+++||. +.+ ++....+.+|... +..+. |+... ..+...++.+||||||
T Consensus 379 ~~~~~~~~~~~~~l~~L~~~~~~~~~~-~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG 457 (489)
T 2jae_A 379 FESLTHRQRLAKAIAEGSEIHGEKYTR-DISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAG 457 (489)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHCGGGGS-SEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECS
T ss_pred hhcCCHHHHHHHHHHHHHHHcCcchhh-hccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeE
Confidence 45678999999999999999987 432 4444445555433 11222 33211 1222345789999999
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHHHHHhC
Q 009508 461 DWITTRHGSWSQERSYVTGLEAANRVVDYLG 491 (533)
Q Consensus 461 ~~~~~g~~~~~iegA~~SG~~aA~~Il~~~g 491 (533)
++++. ++ ++++||+.||+++|++|++.+.
T Consensus 458 ~~~~~-~~-~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 458 DHLSN-AI-AWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp GGGBS-ST-TSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcc-Cc-cHHHHHHHHHHHHHHHHHHHHh
Confidence 99963 44 6999999999999999998876
No 18
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.94 E-value=9.4e-26 Score=235.27 Aligned_cols=403 Identities=14% Similarity=0.138 Sum_probs=208.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCCCCCCC-----------CcccccccccC-CCcHHHHHHHhCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDGNGFGSP-----------DDISMQGFWYP-FRNIFSLVDELGIKP 111 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G-~~V~vlE~~~~~GG~-----------~~~G~~~~~~~-~~~~~~~~~~lg~~~ 111 (533)
+.++||||||||++||+||+.|+++| ++|+|||+++++||+ +|.|++++... .+.+.+++.++|+..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~ 85 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLND 85 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCC
Confidence 34579999999999999999999999 999999999999998 46677777654 345667777777632
Q ss_pred CCcccccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHH
Q 009508 112 FTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELF 191 (533)
Q Consensus 112 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 191 (533)
.. ...+..++..+..+. ....+..... ..+.. +.+.+ ....... +. .....++.|+.+|+
T Consensus 86 ~~----~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~--~~~~~--~~~~~~~--~~----~~~~~~d~s~~~~l 145 (516)
T 1rsg_A 86 GR----TRFVFDDDNFIYIDE--ERGRVDHDKE----LLLEI--VDNEM--SKFAELE--FH----QHLGVSDCSFFQLV 145 (516)
T ss_dssp CC----CCEECCCCCCEEEET--TTEECTTCTT----TCHHH--HHHHH--HHHHHHH--C-----------CCBHHHHH
T ss_pred cc----eeEEECCCCEEEEcC--CCccccccHH----HHHHH--HHHHH--HHHHHHH--hh----hccCCCCCCHHHHH
Confidence 11 001111121111000 0000000000 00000 00000 0000000 00 00123456777776
Q ss_pred HHh------CCCHHHHHHHHHHHH---HhhccCCchhhhHHHHHHHHHHHHHhhcCCcceeeecCCcchhhHHHHHHHHH
Q 009508 192 KQF------GCSERLYRNVIGPLV---QVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMR 262 (533)
Q Consensus 192 ~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~l~ 262 (533)
.+. .+.+.. ..++..++ ....+....++++.... ..... ...++.| .+.+++.|++.+.
T Consensus 146 ~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~s~~~~~--------~~~~~-~~~~~~g--~~~l~~~l~~~l~ 213 (516)
T 1rsg_A 146 MKYLLQRRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLLSAKDTY--------FGHQG-RNAFALN--YDSVVQRIAQSFP 213 (516)
T ss_dssp HHHHHHHGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTSBHHHHC--------CCCSS-CCEEESC--HHHHHHHHHTTSC
T ss_pred HHHHHHhhcccCHHH-HHHHHHHHHHHHHHhCCChHHCChHHHH--------hhccC-cchhhhC--HHHHHHHHHHhCC
Confidence 542 111111 11111111 12234445555543211 01111 1123445 3466666654442
Q ss_pred hcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHHHhh---------hhccccCch-hHHhhccC
Q 009508 263 TRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELI---------KNSILCNRE-EFLKVLNL 331 (533)
Q Consensus 263 ~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll---------~~~~~~~~~-~~~~~~~l 331 (533)
+++|++|++|++|..++ ++. +.|++. +++++||+||+|+|+..+.... ....++.++ ..+.++.+
T Consensus 214 --~~~i~~~~~V~~I~~~~-~~~-v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~ 289 (516)
T 1rsg_A 214 --QNWLKLSCEVKSITREP-SKN-VTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKI 289 (516)
T ss_dssp --GGGEETTCCEEEEEECT-TSC-EEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSS
T ss_pred --CCEEEECCEEEEEEEcC-CCe-EEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhC
Confidence 36899999999999863 133 345555 4579999999999999887431 111111222 34558889
Q ss_pred cceeeEEEEEEeccCCCCCCCCceeeccCCCc--------------------------------ccee----eecccccc
Q 009508 332 ASIDVVSVKLWFDKKVTVPNVSNACSGFGDSL--------------------------------AWTF----FDLNKIYD 375 (533)
Q Consensus 332 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~----~~~~~~~~ 375 (533)
.+.+..|+.+.|++++|...... +.+..... .|.+ ++...
T Consensus 290 ~~~~~~Kv~l~f~~~fW~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 365 (516)
T 1rsg_A 290 HFGALGKVIFEFEECCWSNESSK-IVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSK--- 365 (516)
T ss_dssp CCCCCEEEEEEESSCCSCCSCSE-EEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHH---
T ss_pred CCCcceEEEEEeCCCCCCCCCCc-EEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeee---
Confidence 99999999999999998644222 22211100 0100 00000
Q ss_pred ccCCCCCeEEEEEecCC--CCCCCC--CHHHHHHH---HHHHHhhhhc------CCCCC-------ccc--cceeeeCC-
Q 009508 376 EHKDDSATVIQADFYHA--NELMPL--KDDQVVAK---AVSYLSKCIK------DFSTA-------TVM--DHKIRRFP- 432 (533)
Q Consensus 376 ~~~~~~~~v~~~~~~~~--~~~~~~--~~~ei~~~---~~~~l~~~~p------~~~~~-------~v~--~~~~~r~~- 432 (533)
.++...++. ...+. ..+..+ +++++.+. +++++.++|+ ++... .+. ...+.+|.
T Consensus 366 --~~~~~~L~~-~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~ 442 (516)
T 1rsg_A 366 --STGVASFMM-LMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTR 442 (516)
T ss_dssp --HTSCSEEEE-EECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTT
T ss_pred --cCCCcEEEE-EecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCC
Confidence 011223332 22222 112233 67777654 5556655553 22110 011 33333442
Q ss_pred -----CCccccCCCcccc--CCCC-CCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHHhC
Q 009508 433 -----KSLTHFFPGSYKY--MMRG-FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 491 (533)
Q Consensus 433 -----~~~~~~~pg~~~~--~p~~-~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~~g 491 (533)
+++..+.||.... .... ..+.++|||||++++..++ ++|+||+.||.+||++|++.++
T Consensus 443 dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~-g~v~GA~~SG~raA~~i~~~~~ 508 (516)
T 1rsg_A 443 DPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGA-GCAYGAWESGRREATRISDLLK 508 (516)
T ss_dssp CTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTB-TSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCC-ccchhHHHHHHHHHHHHHHHhh
Confidence 2333445665211 0111 1356899999999988777 8999999999999999999886
No 19
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.94 E-value=3.1e-26 Score=245.97 Aligned_cols=399 Identities=17% Similarity=0.147 Sum_probs=212.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-----------CcccccccccC-CCcHHHHHHHhCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP-----------DDISMQGFWYP-FRNIFSLVDELGIKPF 112 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~-----------~~~G~~~~~~~-~~~~~~~~~~lg~~~~ 112 (533)
...+||+|||||++||++|+.|+++|++|+|+|+++++||+ ++.|.+.+.+. .+.+..+.+++|+...
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMH 413 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCccc
Confidence 44689999999999999999999999999999999999996 35566666554 3446778889998732
Q ss_pred CcccccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCcc------
Q 009508 113 TGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSIT------ 186 (533)
Q Consensus 113 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s------ 186 (533)
........+..+|..... .........+. . .......... .. ......+
T Consensus 414 ~~~~~~~l~~~~g~~~~~-----------~~~~~~~~~~~-----~---ll~~~~~~~~-~~-----~~~~d~sl~~~~~ 468 (776)
T 4gut_A 414 KFGERCDLIQEGGRITDP-----------TIDKRMDFHFN-----A---LLDVVSEWRK-DK-----TQLQDVPLGEKIE 468 (776)
T ss_dssp ECCSCCCEECTTSCBCCH-----------HHHHHHHHHHH-----H---HHHHHHHHGG-GC-----CGGGCCBHHHHHH
T ss_pred ccccccceEccCCcccch-----------hHHHHHHHHHH-----H---HHHHHHHHhh-cc-----cccccccHHHHHH
Confidence 221111222222211000 00000000000 0 0000000000 00 0011122
Q ss_pred --HHHHHHHhCCCHHHHH----HHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhhcCCcceeeecCCcchhhHHHHHHH
Q 009508 187 --ARELFKQFGCSERLYR----NVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDS 260 (533)
Q Consensus 187 --~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~ 260 (533)
+.++++..++.-.... .+....+....+.....++...... ...............+|+. .+.+.+.
T Consensus 469 ~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~----~~~~~~~~G~~~~~~~G~~-~l~~aLa-- 541 (776)
T 4gut_A 469 EIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDH----NEFFAQFAGDHTLLTPGYS-VIIEKLA-- 541 (776)
T ss_dssp HHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTG----GGGSCCCCSCEEECTTCTH-HHHHHHH--
T ss_pred HHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhh----hhhHHhcCCCeEEECChHH-HHHHHHH--
Confidence 2334444333211100 0111111111222222222210000 0000000111122345533 4443333
Q ss_pred HHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHHHhhhhccccCch-hHHhhccCcceeeEE
Q 009508 261 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNRE-EFLKVLNLASIDVVS 338 (533)
Q Consensus 261 l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~-~~~~~~~l~~~~~~~ 338 (533)
.|++|++|++|++|..++ ++ +. |++ +++++.||+||+|+|+..+.+......++.++ ..+.+..+.+.++.+
T Consensus 542 ---~gl~I~l~t~V~~I~~~~-~~-v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~K 615 (776)
T 4gut_A 542 ---EGLDIQLKSPVQCIDYSG-DE-VQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEK 615 (776)
T ss_dssp ---TTSCEESSCCEEEEECSS-SS-EE-EEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEE
T ss_pred ---hCCcEEcCCeeEEEEEcC-CE-EE-EEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEE
Confidence 378999999999999876 34 33 454 45589999999999999887532222111222 334578888888899
Q ss_pred EEEEeccCCCCCC-CCceeeccCC----Cccc--eeeeccccccccCCCCCeEEEEEecCC--CCCCCCCHHHHHHHHHH
Q 009508 339 VKLWFDKKVTVPN-VSNACSGFGD----SLAW--TFFDLNKIYDEHKDDSATVIQADFYHA--NELMPLKDDQVVAKAVS 409 (533)
Q Consensus 339 v~l~~~~~~~~~~-~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~ei~~~~~~ 409 (533)
+.+.|+.++|... ....+++... ...+ .+++.. + .+...++...+.+. ..+..++++++.+.+++
T Consensus 616 V~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~---p---~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~ 689 (776)
T 4gut_A 616 IALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMD---P---QKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMA 689 (776)
T ss_dssp EEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESC---T---TSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHH
T ss_pred EEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCC---C---CCCceEEEEEecchhHHHHHcCCHHHHHHHHHH
Confidence 9999999998532 1112233211 1111 122221 1 12223443333332 33556889999999999
Q ss_pred HHhhhhcCCCCCccccceeeeCCC------CccccCCCccc-cCCCCCCC-CCceEEecccccCCCCCchhhHHHHHHHH
Q 009508 410 YLSKCIKDFSTATVMDHKIRRFPK------SLTHFFPGSYK-YMMRGFTS-FPNLFMAGDWITTRHGSWSQERSYVTGLE 481 (533)
Q Consensus 410 ~l~~~~p~~~~~~v~~~~~~r~~~------~~~~~~pg~~~-~~p~~~~~-~~~l~~aG~~~~~g~~~~~iegA~~SG~~ 481 (533)
+|.++|+......+....+.+|.. ++..+.||... ..+....+ .++|||||++++..++ ++|+||+.||.+
T Consensus 690 ~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~-gtveGAi~SG~R 768 (776)
T 4gut_A 690 TLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFP-QTVTGAYLSGVR 768 (776)
T ss_dssp HHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSC-SSHHHHHHHHHH
T ss_pred HHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCC-cCHHHHHHHHHH
Confidence 999999863222444445555532 22233344321 11111224 4789999999998888 899999999999
Q ss_pred HHHHHHH
Q 009508 482 AANRVVD 488 (533)
Q Consensus 482 aA~~Il~ 488 (533)
+|++|++
T Consensus 769 aA~~Ila 775 (776)
T 4gut_A 769 EASKIAA 775 (776)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9999985
No 20
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.5e-25 Score=221.50 Aligned_cols=228 Identities=11% Similarity=0.078 Sum_probs=151.5
Q ss_pred cCCcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHHHhhhhccccCc-h
Q 009508 246 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNR-E 323 (533)
Q Consensus 246 ~g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~-~ 323 (533)
.+++. .+.+.+.+. .|++|+++++|++|..++ ++ +. ++++ +.++++|.||+|+|+..+.+++.+.....+ .
T Consensus 108 ~~g~~-~l~~~l~~~---~g~~i~~~~~V~~i~~~~-~~-~~-v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~ 180 (342)
T 3qj4_A 108 PQGIS-SIIKHYLKE---SGAEVYFRHRVTQINLRD-DK-WE-VSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISEC 180 (342)
T ss_dssp TTCTT-HHHHHHHHH---HTCEEESSCCEEEEEECS-SS-EE-EEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHH
T ss_pred CCCHH-HHHHHHHHh---cCCEEEeCCEEEEEEEcC-CE-EE-EEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHH
Confidence 34433 566666644 389999999999999876 34 33 4544 446899999999999999988875321111 2
Q ss_pred hHHhhccCcceeeEEEEEEeccCCCCCCCCcee-eccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCH
Q 009508 324 EFLKVLNLASIDVVSVKLWFDKKVTVPNVSNAC-SGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKD 400 (533)
Q Consensus 324 ~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~ 400 (533)
..+.+..+.+.+..++.+.|+.+++.+.+...+ ..-.....|..++...... -.++++..+.....+ ...+.+.++
T Consensus 181 ~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r-~~~~~~~~~v~~~~~~~~~~~~~~~~ 259 (342)
T 3qj4_A 181 QRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNI-ESSEIGPSLVIHTTVPFGVTYLEHSI 259 (342)
T ss_dssp HHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTC-CCC-CCCEEEEEECHHHHHHTTTSCH
T ss_pred HHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCC-CCCCCCceEEEECCHHHHHHhhcCCH
Confidence 345688999999999999999876554443222 2111224454443332111 111223233222211 134567889
Q ss_pred HHHHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCCC--CCCCceEEecccccCCCCCchhhHHHHH
Q 009508 401 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF--TSFPNLFMAGDWITTRHGSWSQERSYVT 478 (533)
Q Consensus 401 ~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~~--~~~~~l~~aG~~~~~g~~~~~iegA~~S 478 (533)
+++.+.++++|.+++|.. .++.+..+.||+++.+.+... .++... ...+||++||||+.. .++|+|+.|
T Consensus 260 ~~~~~~~~~~l~~~~g~~--~~p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g----~~v~~ai~s 330 (342)
T 3qj4_A 260 EDVQELVFQQLENILPGL--PQPIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ----SNFDGCITS 330 (342)
T ss_dssp HHHHHHHHHHHHHHSCSC--CCCSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC----SSHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCC--CCCceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC----CCccHHHHH
Confidence 999999999999999854 356788899999998876431 123222 366899999999964 589999999
Q ss_pred HHHHHHHHHHHh
Q 009508 479 GLEAANRVVDYL 490 (533)
Q Consensus 479 G~~aA~~Il~~~ 490 (533)
|.+||+.|++.+
T Consensus 331 g~~aa~~i~~~l 342 (342)
T 3qj4_A 331 ALCVLEALKNYI 342 (342)
T ss_dssp HHHHHHHHTTC-
T ss_pred HHHHHHHHHhhC
Confidence 999999998753
No 21
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.94 E-value=4.1e-25 Score=225.03 Aligned_cols=400 Identities=16% Similarity=0.167 Sum_probs=214.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCCCCCCC----------CcccccccccCCCcHHHHHHHhCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDGNGFGSP----------DDISMQGFWYPFRNIFSLVDELGIKPFT 113 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G-~~V~vlE~~~~~GG~----------~~~G~~~~~~~~~~~~~~~~~lg~~~~~ 113 (533)
++++||+|||||++||+||++|+++| ++|+|+|+++++||+ +|.|.+.+...++.+.++++++|+....
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~~ 83 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVDG 83 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTTCHHHHHHHHHHCCCCCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecCCcHHHHHHHHHhCCcccc
Confidence 35689999999999999999999999 999999999999998 5778877776678889999999987432
Q ss_pred cccccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHh-hcCCC--CchhhhccCCccHHHH
Q 009508 114 GWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAV-IDFDN--TDVAWRKYDSITAREL 190 (533)
Q Consensus 114 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~s~~~~ 190 (533)
......++..+|..... . ..+.. .......+ .++ ...+... ..+.. ...........++.+|
T Consensus 84 ~~~~~~~~~~~g~~~~~-~-----~~~~~-~~~~~~~~------~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 148 (424)
T 2b9w_A 84 PKLRREFLHEDGEIYVP-E-----KDPVR-GPQVMAAV------QKL--GQLLATKYQGYDANGHYNKVHEDLMLPFDEF 148 (424)
T ss_dssp CCCCEEEECTTSCEECG-G-----GCTTH-HHHHHHHH------HHH--HHHHHTTTTTTTSSSSSSCCCGGGGSBHHHH
T ss_pred ccccceeEcCCCCEecc-c-----cCccc-chhHHHHH------HHH--HHHHhhhhhhcccccchhhhhhhhccCHHHH
Confidence 21111222333322110 0 00000 00000000 000 0000000 00000 0000112345899999
Q ss_pred HHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhhcCCcceeeecCCcchhhHHHHHHHHHhcCCEEEc
Q 009508 191 FKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLD 270 (533)
Q Consensus 191 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~ 270 (533)
+++.+.+ .+...+..+++...++ ++.++++...+..+.................+|+. .+++.+.+. .+.+|++
T Consensus 149 l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~l~~~l~~~---l~~~v~~ 222 (424)
T 2b9w_A 149 LALNGCE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQ-AMFEHLNAT---LEHPAER 222 (424)
T ss_dssp HHHTTCG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHH-HHHHHHHHH---SSSCCBC
T ss_pred HHhhCcH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHH-HHHHHHHHh---hcceEEc
Confidence 9998765 4555555665554443 45667765443221111000000011223456643 676666644 4568999
Q ss_pred CceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEEeccCCCCC
Q 009508 271 GRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP 350 (533)
Q Consensus 271 ~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~ 350 (533)
|++|++|..++ +.+. |++++++++||+||+|+|++.+.++++.. +...+.+..+.+.++. +.+.+....+
T Consensus 223 ~~~V~~i~~~~--~~v~-v~~~~g~~~ad~Vv~a~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~-- 292 (424)
T 2b9w_A 223 NVDITRITRED--GKVH-IHTTDWDRESDVLVLTVPLEKFLDYSDAD----DDEREYFSKIIHQQYM-VDACLVKEYP-- 292 (424)
T ss_dssp SCCEEEEECCT--TCEE-EEESSCEEEESEEEECSCHHHHTTSBCCC----HHHHHHHTTCEEEEEE-EEEEEESSCC--
T ss_pred CCEEEEEEEEC--CEEE-EEECCCeEEcCEEEECCCHHHHhhccCCC----HHHHHHHhcCCcceeE-EEEEEeccCC--
Confidence 99999999875 4443 66666679999999999999776665431 1222234555555543 2222332221
Q ss_pred CCCceeeccC---CCccceeeeccccccccCCCCCeEE-EEEecCCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCccccc
Q 009508 351 NVSNACSGFG---DSLAWTFFDLNKIYDEHKDDSATVI-QADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDH 426 (533)
Q Consensus 351 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~ 426 (533)
....+++.+ ...+|.+++..... ++...++ .........+...+++++.+.++++|.++.++. ..+...
T Consensus 293 -~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~~--~~~~~~ 365 (424)
T 2b9w_A 293 -TISGYVPDNMRPERLGHVMVYYHRWA----DDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHPV--EKIIEE 365 (424)
T ss_dssp -SSEEECGGGGSGGGTTSCCEEEECCT----TCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCCE--EEEEEE
T ss_pred -cccccccCCCCCcCCCcceEEeeecC----CCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCcc--cccccc
Confidence 111122211 01122233222211 1222222 222112234456778899999999999854432 122211
Q ss_pred -eeeeCC-CCccccCCCccccCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHH
Q 009508 427 -KIRRFP-KSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 487 (533)
Q Consensus 427 -~~~r~~-~~~~~~~pg~~~~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il 487 (533)
.+...+ .+...+..|..... ....+.+|+||||+|+. + +.+|+|+.||.++|+.|+
T Consensus 366 ~~w~~~p~~~~~~~~~G~~~~~-~~~~~~~~l~~aG~~~~--~--g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 366 QTWYYFPHVSSEDYKAGWYEKV-EGMQGRRNTFYAGEIMS--F--GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EEEEEEEECCHHHHHTTHHHHH-HHTTTGGGEEECSGGGS--C--SSHHHHHHHHHHHHHHHT
T ss_pred cceeeeeccCHHHHhccHHHHH-HHHhCCCCceEeccccc--c--ccHHHHHHHHHHHHHHhc
Confidence 111111 11112222322211 12335689999999984 3 479999999999999885
No 22
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.93 E-value=1.2e-23 Score=227.23 Aligned_cols=232 Identities=18% Similarity=0.198 Sum_probs=151.4
Q ss_pred ecCCcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe---C--CeeeecCEEEEccChhhHHHhhhh--c
Q 009508 245 CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G--KETYSAGAVVLAVGISTLQELIKN--S 317 (533)
Q Consensus 245 ~~g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~---~--~~~~~ad~VV~a~~~~~~~~ll~~--~ 317 (533)
..||++ .|+++|.+ +.+|++|++|++|..++ +++.+.... + +++++||+||+|+|+..+.++... .
T Consensus 567 ~~gG~~-~L~~aLa~-----~l~I~Lnt~V~~I~~~~-~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F 639 (852)
T 2xag_A 567 VRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTA-SGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQF 639 (852)
T ss_dssp ETTCTT-HHHHHHTT-----TCCEECSEEEEEEEEET-TEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEE
T ss_pred ecCcHH-HHHHHHHh-----CCCEEeCCeEEEEEEcC-CcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhccccc
Confidence 457765 66665553 45899999999999986 343332222 1 357999999999999999874321 1
Q ss_pred cccCchh-HHhhccCcceeeEEEEEEeccCCCCCCCCceeeccC------CCccceeeeccccccccCCCCCeEEEEEec
Q 009508 318 ILCNREE-FLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG------DSLAWTFFDLNKIYDEHKDDSATVIQADFY 390 (533)
Q Consensus 318 ~~~~~~~-~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 390 (533)
.++.+.. .+.++.+.+.++.||.+.|++++|..... ++++. ....+.+++.. ... ++...+.
T Consensus 640 ~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~--~fG~l~~~~~~~~~l~~~~~~~--------~~p-vLl~~v~ 708 (852)
T 2xag_A 640 VPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVN--LFGHVGSTTASRGELFLFWNLY--------KAP-ILLALVA 708 (852)
T ss_dssp ESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCC--EEEECCSSSTTTTTTCEEEECS--------SSS-EEEEEEC
T ss_pred CCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCC--eeeeeccccCCCCceEEEecCC--------CCC-EEEEEec
Confidence 1112222 34588888889999999999999854211 22221 01112233221 122 3322222
Q ss_pred C--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCCccccceeeeCCC------CccccCCCcccc------CC--------C
Q 009508 391 H--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPK------SLTHFFPGSYKY------MM--------R 448 (533)
Q Consensus 391 ~--~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~------~~~~~~pg~~~~------~p--------~ 448 (533)
+ ...+..++++++.+.++++|.++|+.....++....+.+|.. ++..+.||+... .| .
T Consensus 709 G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~ 788 (852)
T 2xag_A 709 GEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPG 788 (852)
T ss_dssp HHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTT
T ss_pred CcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCcccccccccc
Confidence 2 233556789999999999999999764323556666666754 344556665321 11 1
Q ss_pred CCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHHhCCCCC
Q 009508 449 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSF 495 (533)
Q Consensus 449 ~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~~g~~~~ 495 (533)
...+.++|||||++++..++ ++|+||+.||++||++|++.++....
T Consensus 789 ~~~~~grL~FAGE~Ts~~~~-gtveGAi~SG~RAA~~Il~~l~~~~~ 834 (852)
T 2xag_A 789 APQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFLGAMY 834 (852)
T ss_dssp CCCCCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHHCCGG
T ss_pred ccCCCCcEEEEehhHhCCCC-cCHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 23456899999999998777 89999999999999999999975333
No 23
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.93 E-value=2.7e-24 Score=229.64 Aligned_cols=229 Identities=18% Similarity=0.204 Sum_probs=148.4
Q ss_pred ecCCcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe---C--CeeeecCEEEEccChhhHHHhhhh--c
Q 009508 245 CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G--KETYSAGAVVLAVGISTLQELIKN--S 317 (533)
Q Consensus 245 ~~g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~---~--~~~~~ad~VV~a~~~~~~~~ll~~--~ 317 (533)
..||++ .|+++|.+ +.+|++|++|++|..++ ++..+.... + +++++||+||+|+|+..+.++... .
T Consensus 396 ~~gG~~-~l~~~La~-----~l~I~l~~~V~~I~~~~-~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f 468 (662)
T 2z3y_A 396 VRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTA-SGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQF 468 (662)
T ss_dssp ETTCTT-HHHHHHTT-----TCEEETTEEEEEEEEET-TEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEE
T ss_pred ecCcHH-HHHHHHHh-----cCceecCCeEEEEEECC-CcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEE
Confidence 457754 66665553 56899999999999986 443332222 1 357999999999999999874211 1
Q ss_pred cccCch-hHHhhccCcceeeEEEEEEeccCCCCCCCCceeeccC----CCcc--ceeeeccccccccCCCCCeEEEEEec
Q 009508 318 ILCNRE-EFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG----DSLA--WTFFDLNKIYDEHKDDSATVIQADFY 390 (533)
Q Consensus 318 ~~~~~~-~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~ 390 (533)
.++.++ ..+.++.+.+.++.|+.+.|++++|..... .+++. .... +.+++. + ... ++...+.
T Consensus 469 ~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~--~~G~l~~~~~~~~~~~~~~~~------~--~~~-vL~~~~~ 537 (662)
T 2z3y_A 469 VPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVN--LFGHVGSTTASRGELFLFWNL------Y--KAP-ILLALVA 537 (662)
T ss_dssp ESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCS--EEEECCSSSTTTTEEEEEECC------S--SSS-EEEEEEC
T ss_pred cCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCC--ceeeecCCCCCCCceeEEEeC------C--CCC-EEEEEec
Confidence 111223 234588899999999999999999854211 22211 1111 112211 1 122 3333233
Q ss_pred CC--CCCCCCCHHHHHHHHHHHHhhhhcCCCCCccccceeeeCCC------CccccCCCcccc------CC--------C
Q 009508 391 HA--NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPK------SLTHFFPGSYKY------MM--------R 448 (533)
Q Consensus 391 ~~--~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~------~~~~~~pg~~~~------~p--------~ 448 (533)
+. ..+..++++++.+.++++|+++|+.....++....+.+|.. ++..+.||.... .| .
T Consensus 538 G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~ 617 (662)
T 2z3y_A 538 GEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPG 617 (662)
T ss_dssp THHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC------
T ss_pred cHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccccccc
Confidence 22 23556889999999999999999864323555666666654 344556665321 11 1
Q ss_pred CCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHHhCC
Q 009508 449 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 492 (533)
Q Consensus 449 ~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~~g~ 492 (533)
...+.++|||||++++..++ ++|+||+.||++||++|++.++.
T Consensus 618 ~~~~~grl~FAGe~ts~~~~-g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 618 APQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp ---CCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCCcEEEEeccccCCCC-cCHHHHHHHHHHHHHHHHHHccC
Confidence 23456899999999998777 89999999999999999998873
No 24
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.92 E-value=3.6e-25 Score=232.44 Aligned_cols=258 Identities=12% Similarity=0.034 Sum_probs=152.8
Q ss_pred ceeeecCCcchhhHHHHHHHHHhcCCEEEcCceee--EEEeccCCc------eEEE-EEeCCe--eeecCEEEEccChhh
Q 009508 241 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVT--DFIYDEERC------CISD-VVCGKE--TYSAGAVVLAVGIST 309 (533)
Q Consensus 241 ~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~~~V~--~I~~~~~~~------~v~~-v~~~~~--~~~ad~VV~a~~~~~ 309 (533)
....+.||+ +.|.++|.+.+.. |+.|+++++|+ +|..++ ++ .+.. ...++. +++||+||+|+|+..
T Consensus 338 ~~~~i~GG~-~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~ 414 (721)
T 3ayj_A 338 EYTLPVTEN-VEFIRNLFLKAQN-VGAGKLVVQVRQERVANAC-HSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQ 414 (721)
T ss_dssp EECCSSSST-HHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHH
T ss_pred ceeEECCcH-HHHHHHHHHhccc-CCceEeCCEEEeeeEEECC-CCCccccceEEEEEecCCceEEEEcCEEEECCCHHH
Confidence 344466885 4899999987643 67799999999 999875 23 2322 233344 789999999999998
Q ss_pred HHHhh-----h----------------------hcccc-C-------chhHHhhccCcceeeEEEEEEe-----ccCCCC
Q 009508 310 LQELI-----K----------------------NSILC-N-------REEFLKVLNLASIDVVSVKLWF-----DKKVTV 349 (533)
Q Consensus 310 ~~~ll-----~----------------------~~~~~-~-------~~~~~~~~~l~~~~~~~v~l~~-----~~~~~~ 349 (533)
+..++ . ..++. . ....+.++.+.+.+..|+.+.| +++||.
T Consensus 415 L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~ 494 (721)
T 3ayj_A 415 LTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVP 494 (721)
T ss_dssp HHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSC
T ss_pred HhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCccc
Confidence 86422 1 11111 1 2334568999999999999999 899986
Q ss_pred CCCCc-eeecc-CCCccceeeeccccccccCCC-CCeEEEEEecCC--CCC------CCCCHH-------HHHHHHHHHH
Q 009508 350 PNVSN-ACSGF-GDSLAWTFFDLNKIYDEHKDD-SATVIQADFYHA--NEL------MPLKDD-------QVVAKAVSYL 411 (533)
Q Consensus 350 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~--~~~------~~~~~~-------ei~~~~~~~l 411 (533)
..... ..... +......++-++....++.+. .+.++.+...+. ..+ ..++++ .+.+.+++++
T Consensus 495 ~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~l 574 (721)
T 3ayj_A 495 QWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRA 574 (721)
T ss_dssp EETTEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHT
T ss_pred ccCCCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHH
Confidence 54111 11111 111111111000000011122 232333222221 122 223333 4489999999
Q ss_pred h--hhhcCCCCC----------c--cccceeeeC-----CCCccccCCCcc-------ccC--CCCCCCCCceEEecccc
Q 009508 412 S--KCIKDFSTA----------T--VMDHKIRRF-----PKSLTHFFPGSY-------KYM--MRGFTSFPNLFMAGDWI 463 (533)
Q Consensus 412 ~--~~~p~~~~~----------~--v~~~~~~r~-----~~~~~~~~pg~~-------~~~--p~~~~~~~~l~~aG~~~ 463 (533)
. +++|+.... . ..+.....| .+++..+.||+. ... .....+.++|||||+++
T Consensus 575 a~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~ 654 (721)
T 3ayj_A 575 YRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSY 654 (721)
T ss_dssp CCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGG
T ss_pred hhhccCccccccccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhh
Confidence 9 888875400 1 122233333 233345667762 111 11223568999999999
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHhCCCCCcccccCCC
Q 009508 464 TTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIPVEE 503 (533)
Q Consensus 464 ~~g~~~~~iegA~~SG~~aA~~Il~~~g~~~~~~~~~~~~ 503 (533)
+ .+. +++|||+.||.+||..|+..++.++..+..+-++
T Consensus 655 S-~~~-GWieGAl~Sa~~Aa~~i~~~~~~~~~~~~~~~~~ 692 (721)
T 3ayj_A 655 S-HLG-GWLEGAFMSALNAVAGLIVRANRGDVSALSTEAR 692 (721)
T ss_dssp S-SCT-TSHHHHHHHHHHHHHHHHHHHTTTCGGGBCTTTT
T ss_pred c-cCC-ceehHHHHHHHHHHHHHHHHhcCCCCcccCccch
Confidence 7 455 7999999999999999999999988888777555
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.89 E-value=2.9e-21 Score=190.23 Aligned_cols=208 Identities=15% Similarity=0.129 Sum_probs=135.4
Q ss_pred CCEEEcCceeeEEEeccCCceEEEEEeC-Ceee-ecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEE
Q 009508 265 GCEFLDGRRVTDFIYDEERCCISDVVCG-KETY-SAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLW 342 (533)
Q Consensus 265 G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~-~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~ 342 (533)
|++|+++++|++|..++ ++. .++++ +..+ .+|.||+|+|+....+++... ++....+..+.+.+..++.+.
T Consensus 119 g~~i~~~~~v~~i~~~~-~~~--~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~ 191 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGE-EHW--NLLDAEGQNHGPFSHVIIATPAPQASTLLAAA----PKLASVVAGVKMDPTWAVALA 191 (336)
T ss_dssp TCCEECSCCEEEEEECS-SCE--EEEETTSCEEEEESEEEECSCHHHHGGGGTTC----HHHHHHHTTCCEEEEEEEEEE
T ss_pred cCcEEecCEEEEEEEeC-CEE--EEEeCCCcCccccCEEEEcCCHHHHHHhhccC----HHHHHHHhhcCccceeEEEEE
Confidence 88999999999999876 343 24454 3344 489999999999988877542 123345778888888889999
Q ss_pred eccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEe-cCCCCCCCCCHHHHHHHHHHHHhhhhcCCCCC
Q 009508 343 FDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADF-YHANELMPLKDDQVVAKAVSYLSKCIKDFSTA 421 (533)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~ 421 (533)
++.+++.+.. .++..+....|. ++.+.. +...+....++.... .....+..++++++.+++++.+.++++... .
T Consensus 192 ~~~~~~~~~~--~~~~~~~~~~~l-~~~~~~-p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~-~ 266 (336)
T 1yvv_A 192 FETPLQTPMQ--GCFVQDSPLDWL-ARNRSK-PERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTM-P 266 (336)
T ss_dssp ESSCCSCCCC--EEEECSSSEEEE-EEGGGS-TTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCC-C
T ss_pred ecCCCCCCCC--eEEeCCCceeEE-EecCcC-CCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCC-C
Confidence 9888764322 122122233343 332221 111111122322221 012345567899999999999999997421 2
Q ss_pred ccccceeeeCCCCccccCCCccccCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHHhCC
Q 009508 422 TVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 492 (533)
Q Consensus 422 ~v~~~~~~r~~~~~~~~~pg~~~~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~~g~ 492 (533)
.+....+.||.++.+.+..+.. ......+||++||||+.. .++++|+.||.++|+.|.+.+.+
T Consensus 267 ~p~~~~~~rw~~a~~~~~~~~~----~~~~~~~rl~laGDa~~g----~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 267 APVFSLAHRWLYARPAGAHEWG----ALSDADLGIYVCGDWCLS----GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp CCSEEEEEEEEEEEESSCCCCS----CEEETTTTEEECCGGGTT----SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEccccCccCCCCCCCCC----eeecCCCCEEEEecCCCC----CCHHHHHHHHHHHHHHHHHHhhh
Confidence 3444567777776665544431 111345899999999964 48999999999999999999885
No 26
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.88 E-value=1.1e-19 Score=185.93 Aligned_cols=380 Identities=11% Similarity=0.060 Sum_probs=201.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcc----c-cc---------------------cccc----
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDI----S-MQ---------------------GFWY---- 95 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~----G-~~---------------------~~~~---- 95 (533)
..+||||||||++||+||+.|+++|++|+|+|+++++||+... | .. +...
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~ 89 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPK 89 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccccc
Confidence 4689999999999999999999999999999999999999211 1 01 0000
Q ss_pred ---CCCcHHHHHHHhCCCCCCcccc--cceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhh
Q 009508 96 ---PFRNIFSLVDELGIKPFTGWMK--SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVI 170 (533)
Q Consensus 96 ---~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 170 (533)
..+.+.++++++|+.....+.. ..+...+|..+. ++......+ ....+...++..+.+++....
T Consensus 90 ~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~---------~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~ 158 (453)
T 2bcg_G 90 FLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYK---------VPANEIEAI--SSPLMGIFEKRRMKKFLEWIS 158 (453)
T ss_dssp BEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEE---------CCSSHHHHH--HCTTSCHHHHHHHHHHHHHHH
T ss_pred eeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEE---------CCCChHHHH--hhhccchhhHHHHHHHHHHHH
Confidence 2346788999999865443322 112223343222 111100000 001112223333333333222
Q ss_pred cCCCC-chhhh--ccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhccC-CchhhhHHHHHHHHHHHH--HhhcCCcceee
Q 009508 171 DFDNT-DVAWR--KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFA-PAEQCSAAATLGILYFII--LAHQKNFDLVW 244 (533)
Q Consensus 171 ~~~~~-~~~~~--~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~--~~~~~~~~~~~ 244 (533)
.+... ...+. .....|+.+|+++++.++.+.. ++..... .... .....+....+..+..+. ..........+
T Consensus 159 ~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~-l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~ 236 (453)
T 2bcg_G 159 SYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMA-LWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLY 236 (453)
T ss_dssp HCBTTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTS-CCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEEE
T ss_pred HhccCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHHHHH-hccCccccCCchHHHHHHHHHHHHHHHhhcCCceEe
Confidence 22111 01111 2467899999999888777644 3322111 1110 011112222221111111 11122223447
Q ss_pred ecCCcchhhHHHHHHHHHhcCCEEEcCceeeEEEec--cCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCc
Q 009508 245 CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNR 322 (533)
Q Consensus 245 ~~g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~--~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~ 322 (533)
+.||++ .++++|++.+++.|++|+++++|++|..+ + +++++|.++++++.||.||+|++++..
T Consensus 237 p~gG~~-~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~~~V~~~g~~~~ad~VV~a~~~~~~------------ 301 (453)
T 2bcg_G 237 PMYGLG-ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--GKFEGVKTKLGTFKAPLVIADPTYFPE------------ 301 (453)
T ss_dssp ETTCTT-HHHHHHHHHHHHTTCEEECSCCCCEEEEETTT--TEEEEEEETTEEEECSCEEECGGGCGG------------
T ss_pred eCCCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEECCC--CeEEEEEECCeEEECCEEEECCCccch------------
Confidence 888865 89999999999999999999999999987 5 677778888889999999999998721
Q ss_pred hhHHhhccCcceeeEEEEEEeccCCCCC--CCCc-eeeccCC--Cccceee-eccccccccCCCCCeEEEEEecCCCCCC
Q 009508 323 EEFLKVLNLASIDVVSVKLWFDKKVTVP--NVSN-ACSGFGD--SLAWTFF-DLNKIYDEHKDDSATVIQADFYHANELM 396 (533)
Q Consensus 323 ~~~~~~~~l~~~~~~~v~l~~~~~~~~~--~~~~-~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 396 (533)
++..... ........++.++... ..+. +++.... .....+. .++..+ ...+.+.+++.+....+.
T Consensus 302 ----~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d-~~aP~G~~~~~v~~~~~~--- 372 (453)
T 2bcg_G 302 ----KCKSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAH-NVCSKGHYLAIISTIIET--- 372 (453)
T ss_dssp ----GEEEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGG-TSSCTTCEEEEEEEECCS---
T ss_pred ----hhcccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEEEeCCCC-CCCCCCcEEEEEEEecCC---
Confidence 1111110 1111222266655311 1121 2222110 1112222 222222 445666666544332221
Q ss_pred CCCHHHHHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCCCCCCCceEEecccccCCCCCchhhHHH
Q 009508 397 PLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSY 476 (533)
Q Consensus 397 ~~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~ 476 (533)
.+.+ +++...++++.|... .... +.. .+.|- .....+|||++|++-.+ ..+|+++
T Consensus 373 -~~~~---~~l~~~~~~l~~~~~--~~~~--~~~------~~~~~-------~~~~~~~~~~~~~~~~~----~~~~~~~ 427 (453)
T 2bcg_G 373 -DKPH---IELEPAFKLLGPIEE--KFMG--IAE------LFEPR-------EDGSKDNIYLSRSYDAS----SHFESMT 427 (453)
T ss_dssp -SCHH---HHTHHHHGGGCSCSE--EEEE--EEE------EEEES-------SCSTTTSEEECCCCCSC----SBSHHHH
T ss_pred -CCHH---HHHHHHHHHhhhHHH--hhcc--chh------eeeec-------CCCCCCCEEECCCCCcc----ccHHHHH
Confidence 1222 233344444444321 1111 110 11111 11234899999998754 4679999
Q ss_pred HHHHHHHHHHH
Q 009508 477 VTGLEAANRVV 487 (533)
Q Consensus 477 ~SG~~aA~~Il 487 (533)
.+++.++++|+
T Consensus 428 ~~~~~~~~~~~ 438 (453)
T 2bcg_G 428 DDVKDIYFRVT 438 (453)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999998
No 27
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.84 E-value=4.4e-18 Score=172.81 Aligned_cols=249 Identities=10% Similarity=0.098 Sum_probs=150.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC---Cc---cc-----------------cccccc-------
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP---DD---IS-----------------MQGFWY------- 95 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~---~~---~G-----------------~~~~~~------- 95 (533)
..+||+|||||++||++|+.|+++|++|+|+|+++++||+ +. .| .+....
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 4589999999999999999999999999999999999998 23 01 111111
Q ss_pred CCCcHHHHHHHhCCCCCCcccc--cceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCC
Q 009508 96 PFRNIFSLVDELGIKPFTGWMK--SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 173 (533)
Q Consensus 96 ~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 173 (533)
....+.++++++|+.....+.. ..+...+|..+.. +......+ ........++..+.+++.....+.
T Consensus 85 ~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~---------p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~ 153 (433)
T 1d5t_A 85 ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKV---------PSTETEAL--ASNLMGMFEKRRFRKFLVFVANFD 153 (433)
T ss_dssp TTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEEC---------CCSHHHHH--HCSSSCHHHHHHHHHHHHHHHHCC
T ss_pred ccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEEC---------CCCHHHHh--hCcccChhhHHHHHHHHHHHHhhc
Confidence 2245678999999874433322 1122233332221 11100000 001112223322233333222222
Q ss_pred CCch---hhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHh--hcCCcceeeecCC
Q 009508 174 NTDV---AWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA--HQKNFDLVWCRGT 248 (533)
Q Consensus 174 ~~~~---~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~~~~~~~~~~~g~ 248 (533)
.... .+......|+.+|+++++.++.+.. ++...+....+..+.+.++...+..+..+... ........++.||
T Consensus 154 ~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG 232 (433)
T 1d5t_A 154 ENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYG 232 (433)
T ss_dssp TTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTC
T ss_pred ccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcC
Confidence 1111 1113467899999999888776644 33222112222334454544333333333221 1222335678888
Q ss_pred cchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhh
Q 009508 249 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 309 (533)
Q Consensus 249 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~ 309 (533)
++ .++++|.+.++++|++|++|++|++|..++ ++++++.++++++.||+||+|++++.
T Consensus 233 ~~-~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~--~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 233 LG-ELPQGFARLSAIYGGTYMLNKPVDDIIMEN--GKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp TT-HHHHHHHHHHHHHTCCCBCSCCCCEEEEET--TEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HH-HHHHHHHHHHHHcCCEEECCCEEEEEEEeC--CEEEEEEECCeEEECCEEEECCCCCc
Confidence 54 899999999999999999999999999876 77777778888999999999999884
No 28
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.84 E-value=1.4e-19 Score=182.68 Aligned_cols=257 Identities=15% Similarity=0.187 Sum_probs=167.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC------------Ccccc-----------------cccccC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP------------DDISM-----------------QGFWYP 96 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~------------~~~G~-----------------~~~~~~ 96 (533)
..+||+|||+|++|+++|+.|+++|++|+|+|+++++||+ ++.|. +.+...
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~~ 98 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFILV 98 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEET
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEeec
Confidence 4589999999999999999999999999999999999998 12221 112234
Q ss_pred CCcHHHHHHHhCCCCCCccccc--ce-ecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCC
Q 009508 97 FRNIFSLVDELGIKPFTGWMKS--AQ-YSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 173 (533)
Q Consensus 97 ~~~~~~~~~~lg~~~~~~~~~~--~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 173 (533)
...+.+++.+.|+.....|... .+ +..+......+ .+....+|..... ....+.+++.++..+.+++....++.
T Consensus 99 ~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~-~g~~~~VPss~~e--~~~~~lLs~~eK~~l~kFL~~l~~~~ 175 (475)
T 3p1w_A 99 GGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTS-EKFIHKVPATDME--ALVSPLLSLMEKNRCKNFYQYVSEWD 175 (475)
T ss_dssp TSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSC-CEEEEECCCSHHH--HHTCTTSCHHHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHCCchheeEEEecCcceEEecCccccccC-CCceEeCCCCHHH--HhhccCCCHHHHHHHHHHHHHHHhhh
Confidence 4567888899999876666432 11 11000000000 0001122222111 12345678888888777776665543
Q ss_pred CCc-hhhh--ccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHH--HhhcCCcceeeecCC
Q 009508 174 NTD-VAWR--KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNFDLVWCRGT 248 (533)
Q Consensus 174 ~~~-~~~~--~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~~~~~~~~~~~g~ 248 (533)
... ..|. ..+..|+.+|++++++++.+...++..+. .....+..+.++...+..+..+. ...++...+.||+||
T Consensus 176 ~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~ala-L~~~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG 254 (475)
T 3p1w_A 176 ANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVA-LYLNDDYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYG 254 (475)
T ss_dssp TTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTS-CCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTC
T ss_pred hccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHH-hhcCCCcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCC
Confidence 221 1222 23578999999999998887654333321 11112334456655555555443 233446677899999
Q ss_pred cchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCC-eeeecCEEEEccChh
Q 009508 249 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK-ETYSAGAVVLAVGIS 308 (533)
Q Consensus 249 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~-~~~~ad~VV~a~~~~ 308 (533)
++ .|+++|.+.+++.|++|+++++|++|..++ ++++++|.+.+ +++.||+||++++..
T Consensus 255 ~~-~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~-~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 255 LG-GIPEGFSRMCAINGGTFMLNKNVVDFVFDD-DNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp TT-HHHHHHHHHHHHC--CEESSCCEEEEEECT-TSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HH-HHHHHHHHHHHHcCCEEEeCCeEEEEEEec-CCeEEEEEECCCcEEECCEEEECCCcc
Confidence 75 899999999999999999999999999833 37788888865 579999999998755
No 29
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.84 E-value=3.7e-21 Score=193.29 Aligned_cols=247 Identities=15% Similarity=0.102 Sum_probs=148.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCeEEEEcCCCCCCCCC-------------cccccccccCCCcHHHHHHHhCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQ-GFDVTVLDDGNGFGSPD-------------DISMQGFWYPFRNIFSLVDELGIKPF 112 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~GG~~-------------~~G~~~~~~~~~~~~~~~~~lg~~~~ 112 (533)
++||+|||||++||+||+.|+++ |++|+|+|+++++||+. +.|.+.+...++.++++++++|+.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~-- 84 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDF-- 84 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCB--
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhh--
Confidence 68999999999999999999999 99999999999999991 245555555567888999998873
Q ss_pred CcccccceecCCCceecccccccCCCCCCCcccchhhhhcCCC-HHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHH
Q 009508 113 TGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLP-LVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELF 191 (533)
Q Consensus 113 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 191 (533)
..+.....+..+|..+..|. .... +..+.... ..+++. ..+..... .....+..|+++|+
T Consensus 85 ~~~~~~~~~~~~G~~~~~p~---------~~~~--~~~l~~~~~~~~~~~--~~l~~~~~------~~~~~~~~s~~e~l 145 (399)
T 1v0j_A 85 TDYRHRVFAMHNGQAYQFPM---------GLGL--VSQFFGKYFTPEQAR--QLIAEQAA------EIDTADAQNLEEKA 145 (399)
T ss_dssp CCCCCCEEEEETTEEEEESS---------SHHH--HHHHHTSCCCHHHHH--HHHHHHGG------GSCTTC----CCHH
T ss_pred hccccceEEEECCEEEeCCC---------CHHH--HHHHhcccCCHHHHH--HHHHHHhh------ccCCCCcccHHHHH
Confidence 12222222333443332211 1000 11111110 011111 01111110 00123567889999
Q ss_pred HHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhhcCC-c--ce-eeecCCcchhhHHHHHHHHHhcCCE
Q 009508 192 KQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKN-F--DL-VWCRGTLREKIFEPWMDSMRTRGCE 267 (533)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-~--~~-~~~~g~~~~~l~~~l~~~l~~~G~~ 267 (533)
.+. +++.+++.++.+++...|+.++.++++.........+ ..... . .. .+++||+. .++++|++ ++|++
T Consensus 146 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~--~~~~~~~~~~~~~~p~gG~~-~l~~~l~~---~~g~~ 218 (399)
T 1v0j_A 146 ISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRY--TFDNRYFSDTYEGLPTDGYT-AWLQNMAA---DHRIE 218 (399)
T ss_dssp HHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCS--SSCCCSCCCSEEECBTTHHH-HHHHHHTC---STTEE
T ss_pred HHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEe--ccccchhhhhhcccccccHH-HHHHHHHh---cCCeE
Confidence 873 5688899999999999999999999876431000000 00001 1 12 25677754 66666553 46899
Q ss_pred EEcCceeeEEEeccCCceEEEEEeCCeee-ecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEEeccC
Q 009508 268 FLDGRRVTDFIYDEERCCISDVVCGKETY-SAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKK 346 (533)
Q Consensus 268 i~~~~~V~~I~~~~~~~~v~~v~~~~~~~-~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~ 346 (533)
|++|++|++|.. . + + ++ .||+||+|+|+..+.++ .+..+.+.+...+.+.++.+
T Consensus 219 I~l~~~V~~I~~----~----v--~--~~~~aD~VI~t~p~~~l~~~-------------~l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 219 VRLNTDWFDVRG----Q----L--R--PGSPAAPVVYTGPLDRYFDY-------------AEGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp EECSCCHHHHHH----H----H--T--TTSTTCCEEECSCHHHHTTT-------------TTCCCCEEEEEEEEEEESSS
T ss_pred EEECCchhhhhh----h----h--h--hcccCCEEEECCcHHHHHhh-------------hhCCCCcceEEEEEEEEccc
Confidence 999999998863 2 1 1 45 79999999999876644 23456666666666777654
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.83 E-value=2.4e-20 Score=186.18 Aligned_cols=241 Identities=15% Similarity=0.110 Sum_probs=149.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC------------C-cccccccccCCCcHHHHHHHhCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP------------D-DISMQGFWYPFRNIFSLVDELGIKPFT 113 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~------------~-~~G~~~~~~~~~~~~~~~~~lg~~~~~ 113 (533)
++||+|||||++||++|+.|+++|++|+|+|+++++||+ + +.|.+.+...++.+.+++++++...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~-- 80 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMM-- 80 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCEE--
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhhc--
Confidence 479999999999999999999999999999999999998 1 4566666666788899999987531
Q ss_pred cccccceecCCCceecccccccCCCCCCCcccchhhhhcCCC-HHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHHH
Q 009508 114 GWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLP-LVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFK 192 (533)
Q Consensus 114 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 192 (533)
.+........+|..+..|. ... .+..+.... ..++. ...+...... ...+..|+++|+.
T Consensus 81 ~~~~~~~~~~~g~~~~~P~---------~~~--~~~~l~~~~~~~~~~--~~~l~~~~~~-------~~~~~~sl~e~~~ 140 (384)
T 2bi7_A 81 PYVNRVKATVNGQVFSLPI---------NLH--TINQFFSKTCSPDEA--RALIAEKGDS-------TIADPQTFEEEAL 140 (384)
T ss_dssp ECCCCEEEEETTEEEEESC---------CHH--HHHHHTTCCCCHHHH--HHHHHHHSCC-------SCSSCCBHHHHHH
T ss_pred ccccceEEEECCEEEECCC---------Chh--HHHHHhcccCCHHHH--HHHHHHhhhc-------cCCCCcCHHHHHH
Confidence 1111112222333222211 110 011111110 01111 1111111110 0235689999998
Q ss_pred HhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhh--cCCcceeeecCCcchhhHHHHHHHHHhcCCEEEc
Q 009508 193 QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH--QKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLD 270 (533)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~ 270 (533)
+. +++.+++.++.+++...|+.++.++++.............. .......+++||+. .++++|++ +.|++|++
T Consensus 141 ~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~---~~g~~I~l 215 (384)
T 2bi7_A 141 RF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYT-QMIKSILN---HENIKVDL 215 (384)
T ss_dssp HH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHH-HHHHHHHC---STTEEEEE
T ss_pred Hh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHH-HHHHHHHh---cCCCEEEE
Confidence 75 67999999999999999999999999764310000000000 00111126777754 66666653 46899999
Q ss_pred Cceee-EEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEEec
Q 009508 271 GRRVT-DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFD 344 (533)
Q Consensus 271 ~~~V~-~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~ 344 (533)
|++|+ +|.. .+|+||+|+|+..+.+++ +..+.+.+...+.+.++
T Consensus 216 ~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~-------------lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 216 QREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ-------------YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp SCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT-------------TCCCCEEEEEEEEEEEE
T ss_pred CCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh-------------cCCCCcceEEEEEEEeC
Confidence 99998 6641 289999999999776542 23466666665666666
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.83 E-value=7.5e-20 Score=181.55 Aligned_cols=245 Identities=15% Similarity=0.108 Sum_probs=152.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC----------C-cccccccccCCCcHHHHHHHhCCCCCCcc
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP----------D-DISMQGFWYPFRNIFSLVDELGIKPFTGW 115 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~----------~-~~G~~~~~~~~~~~~~~~~~lg~~~~~~~ 115 (533)
++||+|||||++||++|+.|+++|++|+|+|+++++||+ + +.|.+.+...++.+++++++++... .+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~--~~ 78 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFN--RF 78 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEESCHHHHHHHHTTSCBC--CC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecCCCHHHHHHHHHhhhhh--hc
Confidence 369999999999999999999999999999999999998 3 3677777766677888888887532 22
Q ss_pred cccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHHHHhC
Q 009508 116 MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFG 195 (533)
Q Consensus 116 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 195 (533)
........+|..+..|. ... .+..+......+++ ..++..... .+...+..|+++|+.+.
T Consensus 79 ~~~~~~~~~g~~~~~p~---------~~~--~~~~l~~~~~~~~~--~~~l~~~~~------~~~~~~~~s~~~~~~~~- 138 (367)
T 1i8t_A 79 TNSPLAIYKDKLFNLPF---------NMN--TFHQMWGVKDPQEA--QNIINAQKK------KYGDKVPENLEEQAISL- 138 (367)
T ss_dssp CCCCEEEETTEEEESSB---------SHH--HHHHHHCCCCHHHH--HHHHHHHTT------TTCCCCCCSHHHHHHHH-
T ss_pred cccceEEECCeEEEcCC---------CHH--HHHHHhccCCHHHH--HHHHHHHhh------ccCCCCCccHHHHHHHH-
Confidence 22222222333222211 110 01111111001111 111111111 11223567999999875
Q ss_pred CCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhhcCC--cc--eeeecCCcchhhHHHHHHHHHhcCCEEEcC
Q 009508 196 CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKN--FD--LVWCRGTLREKIFEPWMDSMRTRGCEFLDG 271 (533)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~--~~--~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~ 271 (533)
+++++.+.++.+++...|+.++.++++..... +... ...... .. ..+++||+. .++++|++ |++|++|
T Consensus 139 ~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~-l~~~-~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~-----g~~i~l~ 210 (367)
T 1i8t_A 139 VGEDLYQALIKGYTEKQWGRSAKELPAFIIKR-IPVR-FTFDNNYFSDRYQGIPVGGYT-KLIEKMLE-----GVDVKLG 210 (367)
T ss_dssp HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCC-CCBC-SSSCCCSCCCSEEECBTTCHH-HHHHHHHT-----TSEEECS
T ss_pred HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhh-ceee-eccccccccchhhcccCCCHH-HHHHHHhc-----CCEEEeC
Confidence 66889999999999999999999999764310 0000 000000 11 126778854 56665553 6999999
Q ss_pred ceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEEeccCC
Q 009508 272 RRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKV 347 (533)
Q Consensus 272 ~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~ 347 (533)
++|++|. . . + .+.+|+||+|+|+..+.++ .+..+.+.+...+.+.++.+.
T Consensus 211 ~~V~~i~--~--~----v-----~~~~D~VV~a~p~~~~~~~-------------~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 211 IDFLKDK--D--S----L-----ASKAHRIIYTGPIDQYFDY-------------RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp CCGGGSH--H--H----H-----HTTEEEEEECSCHHHHTTT-------------TTCCCCEEEEEEEEEEESSSC
T ss_pred Cceeeec--h--h----h-----hccCCEEEEeccHHHHHHH-------------hhCCCCCceEEEEEEEecccc
Confidence 9999885 2 2 1 2579999999998865432 234567777766777777654
No 32
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.80 E-value=1e-18 Score=173.20 Aligned_cols=345 Identities=12% Similarity=0.117 Sum_probs=199.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC------------CcccccccccCCCcHHHHHHHhCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP------------DDISMQGFWYPFRNIFSLVDELGIKPF 112 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~------------~~~G~~~~~~~~~~~~~~~~~lg~~~~ 112 (533)
...+||+|||||++||++|+.|+++|++|+|+|+++++||+ .+.|.|.+....+.++++++++|...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~- 105 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWR- 105 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEE-
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhcc-
Confidence 45689999999999999999999999999999999999998 25566777667778899999988431
Q ss_pred CcccccceecCCCceecccccccCCCCCCCcccchhhhhcCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHHH
Q 009508 113 TGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFK 192 (533)
Q Consensus 113 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 192 (533)
..........+|..+..|. .+.. +..+..+.+... .....+. ...+...+..|+++|+.
T Consensus 106 -~~~~~~~~~~~g~l~~lP~---------~~~~--~~~l~~~~~~~~-----~~~~~l~----~~~~~~~~~~s~~e~~~ 164 (397)
T 3hdq_A 106 -PYQHRVLASVDGQLLPIPI---------NLDT--VNRLYGLNLTSF-----QVEEFFA----SVAEKVEQVRTSEDVVV 164 (397)
T ss_dssp -ECCCBEEEEETTEEEEESC---------CHHH--HHHHHTCCCCHH-----HHHHHHH----HHCCCCSSCCBHHHHHH
T ss_pred -cccccceEEECCEEEEcCC---------ChHH--HHHhhccCCCHH-----HHHHHHh----hcccCCCCCcCHHHHHH
Confidence 1111222223443333221 1110 111111111000 0001110 01123456789999988
Q ss_pred HhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHHHHHhhcC----Ccce-eeecCCcchhhHHHHHHHHHhcCCE
Q 009508 193 QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK----NFDL-VWCRGTLREKIFEPWMDSMRTRGCE 267 (533)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~----~~~~-~~~~g~~~~~l~~~l~~~l~~~G~~ 267 (533)
+. +++++++.++.+++...|+.+++++|+.+.. .+.. ..... .-.+ .+|+||+. .+++.|+ ++.|++
T Consensus 165 ~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~--~~~~d~~yf~~~~qg~P~gGy~-~l~e~l~---~~~g~~ 236 (397)
T 3hdq_A 165 SK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPT--RTNRDNRYFADTYQAMPLHGYT-RMFQNML---SSPNIK 236 (397)
T ss_dssp HH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCC--CSSCCCBSCCCSEEEEETTCHH-HHHHHHT---CSTTEE
T ss_pred Hh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCc--ccccCccchhhhheeccCCCHH-HHHHHHH---hccCCE
Confidence 64 5689999999999999999999999986432 1100 00001 1112 35788864 5655553 456999
Q ss_pred EEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEEeccCC
Q 009508 268 FLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKV 347 (533)
Q Consensus 268 i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~ 347 (533)
|++|++|+++ +..+.+|+||+|+|...+... ....|.+.+...+.+.++.+.
T Consensus 237 V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~-------------~~g~L~yrsl~~~~~~~~~~~ 288 (397)
T 3hdq_A 237 VMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF-------------CYGKLPYRSLEFRHETHDTEQ 288 (397)
T ss_dssp EEESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT-------------TTCCCCEEEEEEEEEEESSSC
T ss_pred EEECCeEEec---------------cccccCCEEEEcCCHHHHHHH-------------hcCCCCCceEEEEEEEecccc
Confidence 9999999832 124578999999997655311 244567777766777787654
Q ss_pred CCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCCcccc
Q 009508 348 TVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMD 425 (533)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~~ 425 (533)
..+..+ +.+.-.+ ....+..+.... . .+.+++++...+.. .+++.+..+++-.+.+.+.++..
T Consensus 289 ~~~~~~-vn~~d~~-p~tRi~e~k~~~-~-~~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~a----------- 353 (397)
T 3hdq_A 289 LLPTGT-VNYPNDY-AYTRVSEFKHIT-G-QRHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEALA----------- 353 (397)
T ss_dssp SCSSSE-EECSSSS-SCSEEEEHHHHH-C-CCCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHHH-----------
T ss_pred CCCCeE-EEeCCCC-cceEEEeecccC-C-CCCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHHH-----------
Confidence 332222 1111111 111122222221 1 12345665544332 12333333322222222211110
Q ss_pred ceeeeCCCCccccCCCccccCCCCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 009508 426 HKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 489 (533)
Q Consensus 426 ~~~~r~~~~~~~~~pg~~~~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~ 489 (533)
...+||+|+|.....-+ .-|+.++.+|..+++.|++.
T Consensus 354 -------------------------~~~~~v~~~GRlg~y~Y--~~md~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 354 -------------------------DAAQDVTFVGRLATYRY--YNMDQVVAQALATFRRLQGQ 390 (397)
T ss_dssp -------------------------HHCTTEEECSTTTTTCC--CCHHHHHHHHHHHHHHHHC-
T ss_pred -------------------------hcCCCEEEcccceEEEe--ccHHHHHHHHHHHHHHHhcc
Confidence 02368999998885444 47999999999999998764
No 33
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.66 E-value=1e-12 Score=136.44 Aligned_cols=148 Identities=11% Similarity=0.112 Sum_probs=99.3
Q ss_pred cCCCHHhhhhcchhhHHhhcCCCCchhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhccCCchhhhHHHHHHHHHH
Q 009508 152 SRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYF 231 (533)
Q Consensus 152 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 231 (533)
..+++.++..+.+++.....+......+..++..|+.+|+++++.++.+...+...+ .... ....++...+..+..
T Consensus 282 ~~Lsl~EKr~L~kFl~~~~~~~~~p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~l--al~~--~~~~pa~~~l~~i~~ 357 (650)
T 1vg0_A 282 KQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSI--AMTS--ETTSCTVDGLKATKK 357 (650)
T ss_dssp SSSCHHHHHHHHHHHHHHHTGGGCHHHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHT--TC----CCSCBHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHhccChHHHhhhccCCHHHHHHHhCCCHHHHHHHHHHH--hccC--CCCCchhHHHHHHHH
Confidence 567777887777766665554332234557789999999999988877654433221 1111 111233333333333
Q ss_pred HHH--hhcCCcceeeecCCcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEc
Q 009508 232 IIL--AHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLA 304 (533)
Q Consensus 232 ~~~--~~~~~~~~~~~~g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a 304 (533)
+.. ..+......|+.||++ .|.++|.+.++..|++|+++++|++|..+++.|++++|... |+++.||+||++
T Consensus 358 ~l~sl~~yg~sg~~yp~GG~g-~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 358 FLQCLGRYGNTPFLFPLYGQG-ELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE 432 (650)
T ss_dssp HHHHTTSSSSSSEEEETTCTT-HHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE
T ss_pred HHHHHHhhccCceEEeCCchh-HHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC
Confidence 332 2233346678899976 89999999999999999999999999987522777788753 678999999984
No 34
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.63 E-value=4.5e-14 Score=141.16 Aligned_cols=58 Identities=16% Similarity=0.248 Sum_probs=49.7
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~ 311 (533)
..++..|.+.++++|++|+++++|++|..++ +. +.|+++++++.||.||+|+|.+...
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~-~~V~t~~g~i~a~~VV~A~G~~s~~ 211 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GA-WEVRCDAGSYRAAVLVNAAGAWCDA 211 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEET--TE-EEEECSSEEEEESEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--Ce-EEEEeCCCEEEcCEEEECCChhHHH
Confidence 4688889999999999999999999999876 44 5677777799999999999998643
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.63 E-value=2.6e-14 Score=142.14 Aligned_cols=207 Identities=9% Similarity=-0.060 Sum_probs=107.7
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCC---eeeecCEEEEccChhhHHHhhhhc-cccCchhHH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK---ETYSAGAVVLAVGISTLQELIKNS-ILCNREEFL 326 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~---~~~~ad~VV~a~~~~~~~~ll~~~-~~~~~~~~~ 326 (533)
..+...|.+.++++|++|+++++|++|..++ ++.+ .+.+++ .++.||.||+|+|.+... ++... ..+ .
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s~~-l~~~~~g~~--~--- 221 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRP-EGGF-ELDFGGAEPMTLSCRVLINAAGLHAPG-LARRIEGIP--R--- 221 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSSE-EEEECTTSCEEEEEEEEEECCGGGHHH-HHHTEETSC--G---
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CceE-EEEECCCceeEEEeCEEEECCCcchHH-HHHHhcCCC--c---
Confidence 4678889999999999999999999999876 3423 345543 389999999999998543 44332 110 0
Q ss_pred hhccCcceeeEEEEEEeccCCCCCCCCceeeccC--CCccceeeeccccccccCCCCCeEE-EEEecCCCCCCCCCHHHH
Q 009508 327 KVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG--DSLAWTFFDLNKIYDEHKDDSATVI-QADFYHANELMPLKDDQV 403 (533)
Q Consensus 327 ~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ei 403 (533)
.......+....++.++.+.. ..+. ++... ..... .+.. ..++.++ ..............+++.
T Consensus 222 -~~~~~i~p~rG~~~~~~~~~~--~~~~-~~~~p~~~~~~~-~~~~--------~~~g~~~iG~t~e~~~~~~~~~~~~~ 288 (369)
T 3dme_A 222 -DSIPPEYLCKGSYFTLAGRAP--FSRL-IYPVPQHAGLGV-HLTL--------DLGGQAKFGPDTEWIATEDYTLDPRR 288 (369)
T ss_dssp -GGSCCCEEEEEEEEECSSSCS--CSSE-EEECTTCSSCCC-CEEE--------CTTSCEEECCCCEEESSCCCCCCGGG
T ss_pred -cccceeeecceEEEEECCCCc--cCce-eecCCCCCCceE-EEeC--------ccCCcEEECCCcccccccccccCHHH
Confidence 000111122222344443311 1111 11110 00000 1100 0122221 111100011222334566
Q ss_pred HHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCC----CCCCCceEEecccccCCCCCchhhHHHHHH
Q 009508 404 VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG----FTSFPNLFMAGDWITTRHGSWSQERSYVTG 479 (533)
Q Consensus 404 ~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~----~~~~~~l~~aG~~~~~g~~~~~iegA~~SG 479 (533)
.+.+++.+.+++|.+.+.++...+....+... .++.....|.+ ....+|+|++..+.+ .++..|...|
T Consensus 289 ~~~l~~~~~~~~P~l~~~~v~~~w~G~Rp~~~---~~~~~d~~p~i~g~~~~~~~~l~~~~G~~~-----~G~t~ap~~a 360 (369)
T 3dme_A 289 ADVFYAAVRSYWPALPDGALAPGYTGIRPKIS---GPHEPAADFAIAGPASHGVAGLVNLYGIES-----PGLTASLAIA 360 (369)
T ss_dssp GGGHHHHHHTTCTTCCTTCCEEEEEEEEEESS---CTTSCCCCCEEECHHHHCCTTEEEEECCCT-----THHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCChhhceecceecccccc---CCCCCcCCeEEecccccCCCCEEEEeCCCC-----chHhccHHHH
Confidence 78888999999999876566554443222110 01211122322 124689988876653 3566678888
Q ss_pred HHHHHHH
Q 009508 480 LEAANRV 486 (533)
Q Consensus 480 ~~aA~~I 486 (533)
+.+|+.|
T Consensus 361 ~~~a~~i 367 (369)
T 3dme_A 361 EETLARL 367 (369)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888776
No 36
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.60 E-value=1.5e-13 Score=131.31 Aligned_cols=86 Identities=16% Similarity=0.136 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCCCCCCCceEEecccccCCCCCchhhHHHH
Q 009508 398 LKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYV 477 (533)
Q Consensus 398 ~~~~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~~~~~~~l~~aG~~~~~g~~~~~iegA~~ 477 (533)
....+..+.....+...+.... ..+....+.+|.++.+...... +...+..+|||+|||++.. .++++|+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~w~~a~~~~~~~~----~~~~~~~~~v~l~GDa~~g----~gv~~A~~ 314 (336)
T 3kkj_A 244 ASREQVIEHLHGAFAELIDCTM-PAPVFSLAHRWLYARPAGAHEW----GALSDADLGIYVCGDWCLS----GRVEGAWL 314 (336)
T ss_dssp SCHHHHHHHHHHHHHTTCSSCC-CCCSEEEEEEEEEEEESSCCCC----SSEEETTTTEEECCGGGTT----SSHHHHHH
T ss_pred ccchhhhhhhhhhhhhhccCCc-CcchheeccceeecccccccCc----cceeeCCCCEEEEecccCC----cCHHHHHH
Confidence 4455556666666666654322 2444555666665544322211 1223356899999999853 47999999
Q ss_pred HHHHHHHHHHHHhCC
Q 009508 478 TGLEAANRVVDYLGD 492 (533)
Q Consensus 478 SG~~aA~~Il~~~g~ 492 (533)
||+.||+.|++.|..
T Consensus 315 sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 315 SGQEAARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999999974
No 37
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.60 E-value=1.9e-13 Score=136.60 Aligned_cols=196 Identities=11% Similarity=0.013 Sum_probs=109.7
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhcc
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 330 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 330 (533)
..+...|.+.+++.|++|+++++|++|..++ +.+ .+.++++++.||.||+|+|.+... +.+.... .
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~s~~-l~~~~~~----------~ 229 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EAL-FIKTPSGDVWANHVVVASGVWSGM-FFKQLGL----------N 229 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSE-EEEETTEEEEEEEEEECCGGGTHH-HHHHTTC----------C
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEE-EEEcCCceEEcCEEEECCChhHHH-HHHhcCC----------C
Confidence 4678888888988999999999999999876 444 566776789999999999998542 4332210 0
Q ss_pred CcceeeEEEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHHHH
Q 009508 331 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSY 410 (533)
Q Consensus 331 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ei~~~~~~~ 410 (533)
+...+.....+.++.+... ... .++. . ..++-+ ..++.++.........+.....++..+.+++.
T Consensus 230 ~~~~~~~g~~~~~~~~~~~-~~~-~~~~---~--~~~~~p--------~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~ 294 (382)
T 1ryi_A 230 NAFLPVKGECLSVWNDDIP-LTK-TLYH---D--HCYIVP--------RKSGRLVVGATMKPGDWSETPDLGGLESVMKK 294 (382)
T ss_dssp CCCEEEEEEEEEEECCSSC-CCS-EEEE---T--TEEEEE--------CTTSEEEEECCCEETCCCCSCCHHHHHHHHHH
T ss_pred CceeccceEEEEECCCCCC-ccc-eEEc---C--CEEEEE--------cCCCeEEEeecccccCCCCCCCHHHHHHHHHH
Confidence 1112222222333332110 111 1111 0 111111 11233322211111222333456778899999
Q ss_pred HhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCC--CCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHH
Q 009508 411 LSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 488 (533)
Q Consensus 411 l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~--~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~ 488 (533)
+.++||.+.+..+...+.. ...++++. .|.. ....+|+|+++.+... ++..|..+|+.+|+.|+.
T Consensus 295 ~~~~~p~l~~~~~~~~w~g-----~~~~t~d~---~p~ig~~~~~~~l~~~~G~~g~-----G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 295 AKTMLPAIQNMKVDRFWAG-----LRPGTKDG---KPYIGRHPEDSRILFAAGHFRN-----GILLAPATGALISDLIMN 361 (382)
T ss_dssp HHHHCGGGGGSEEEEEEEE-----EEEECSSS---CCEEEEETTEEEEEEEECCSSC-----TTTTHHHHHHHHHHHHTT
T ss_pred HHHhCCCcCCCceeeEEEE-----ecccCCCC---CcEeccCCCcCCEEEEEcCCcc-----hHHHhHHHHHHHHHHHhC
Confidence 9999998764444333322 11222322 1211 1135789988776632 456689999999999863
No 38
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.59 E-value=1e-13 Score=141.40 Aligned_cols=58 Identities=19% Similarity=0.322 Sum_probs=50.0
Q ss_pred hhhHHHHHHHHHhcCCEEEcCc---eeeEEEeccCCceEEEEEeCCe-eeecCEEEEccChhhH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGR---RVTDFIYDEERCCISDVVCGKE-TYSAGAVVLAVGISTL 310 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~---~V~~I~~~~~~~~v~~v~~~~~-~~~ad~VV~a~~~~~~ 310 (533)
..+...|.+.++++|++|++++ +|++|..++ +.+++|.+.++ ++.||.||+|+|.+..
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCChh
Confidence 3678889999999999999999 999999876 67777777655 8999999999999854
No 39
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.58 E-value=2e-12 Score=130.22 Aligned_cols=199 Identities=15% Similarity=0.088 Sum_probs=109.4
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhccC
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 331 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l 331 (533)
.+...|.+.+++.|++|+.+++|++|..++ +.++++.++++++.+|.||+|+|.+... +...... .+
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~a~~vV~a~G~~s~~-l~~~~g~----------~~ 241 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTRGTIHAGKVALAGAGHSSV-LAEMAGF----------EL 241 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTCCEEEEEEEECCGGGHHH-HHHHHTC----------CC
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCCceEECCEEEECCchhHHH-HHHHcCC----------CC
Confidence 677888888999999999999999999875 5566677766689999999999988632 3221100 01
Q ss_pred cceeeEEEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEE-EEEecCCCCCCCCCHHHHHHHHHHH
Q 009508 332 ASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVI-QADFYHANELMPLKDDQVVAKAVSY 410 (533)
Q Consensus 332 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ei~~~~~~~ 410 (533)
...+.....+..+ +...... ..+... . ...++.+. .++.++ ...............++..+.+++.
T Consensus 242 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~--~-~~~y~~p~--------~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~ 308 (405)
T 2gag_B 242 PIQSHPLQALVSE-LFEPVHP-TVVMSN--H-IHVYVSQA--------HKGELVMGAGIDSYNGYGQRGAFHVIQEQMAA 308 (405)
T ss_dssp CEEEEEEEEEEEE-EBCSCCC-SEEEET--T-TTEEEEEC--------TTSEEEEEEEECSSCCCSSCCCTHHHHHHHHH
T ss_pred CccccceeEEEec-CCccccC-ceEEeC--C-CcEEEEEc--------CCCcEEEEeccCCCCccccCCCHHHHHHHHHH
Confidence 1111111112222 1110001 111110 0 11122110 133333 2222111112223345678888999
Q ss_pred HhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCCC-CCCCceEEecccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 009508 411 LSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF-TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 489 (533)
Q Consensus 411 l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~~-~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~~ 489 (533)
+.+++|.+.+..+...+.. ....+++. .|.+- .+.+|+|++..+... ++.-|...|+.+|+.|+..
T Consensus 309 ~~~~~p~l~~~~~~~~w~g-----~~~~t~d~---~p~ig~~~~~~l~~~~G~~g~-----G~~~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 309 AVELFPIFARAHVLRTWGG-----IVDTTMDA---SPIISKTPIQNLYVNCGWGTG-----GFKGTPGAGFTLAHTIAND 375 (405)
T ss_dssp HHHHCGGGGGCEECEEEEE-----EEEEETTS---CCEEEECSSBTEEEEECCGGG-----CSTTHHHHHHHHHHHHHHT
T ss_pred HHHhCCccccCCcceEEee-----ccccCCCC---CCEecccCCCCEEEEecCCCc-----hhhHHHHHHHHHHHHHhCC
Confidence 9999998764444443332 11223332 12111 125789988766633 3455889999999999864
No 40
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.57 E-value=7.4e-13 Score=132.38 Aligned_cols=203 Identities=10% Similarity=0.059 Sum_probs=112.3
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhc-
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVL- 329 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~- 329 (533)
..+...|.+.+++.|++|+.+++|++|+.++ +.+.+|+++++++.||.||+|+|.+... +..... +.
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~g~i~a~~VV~A~G~~s~~-l~~~~g---------~~~ 216 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNKGIIKTGIVVNATNAWANL-INAMAG---------IKT 216 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTEEEECSEEEECCGGGHHH-HHHHHT---------CCS
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECCcEEECCEEEECcchhHHH-HHHHcC---------CCc
Confidence 4677888899999999999999999999876 5666677777789999999999998533 332210 00
Q ss_pred cCcceeeEEEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEE-ecCCCCCCCCCHHHHHHHHH
Q 009508 330 NLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD-FYHANELMPLKDDQVVAKAV 408 (533)
Q Consensus 330 ~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~ei~~~~~ 408 (533)
.+...+.....+.++.. ........+... .....++.+. .++.++... ......+....+++..+.++
T Consensus 217 ~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~--~~~~~y~~p~--------~~g~~iG~~~~~~~~~~~~~~~~~~~~~l~ 285 (382)
T 1y56_B 217 KIPIEPYKHQAVITQPI-KRGTINPMVISF--KYGHAYLTQT--------FHGGIIGGIGYEIGPTYDLTPTYEFLREVS 285 (382)
T ss_dssp CCCCEEEEEEEEEECCC-STTSSCSEEEES--TTTTEEEECC--------SSSCCEEECSCCBSSCCCCCCCHHHHHHHH
T ss_pred CcCCCeeEeEEEEEccC-CcccCCCeEEec--CCCeEEEEEe--------CCeEEEecCCCCCCCCCCCCCCHHHHHHHH
Confidence 01122221122233221 110110112111 0011222111 123222211 11111222334567788899
Q ss_pred HHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCC--CCCCCceEEecccccCCCCCchhhHHHHHHHHHHHHH
Q 009508 409 SYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRV 486 (533)
Q Consensus 409 ~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~--~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~I 486 (533)
+.+.++||.+.+.++...+.. ....+|+. .|.+ ....+|+|++..+. + .++.-|..+|+.+|+.|
T Consensus 286 ~~~~~~~p~l~~~~~~~~~~g-----~r~~t~d~---~p~ig~~~~~~~~~~~~G~~--g---~G~~~a~~~g~~la~~i 352 (382)
T 1y56_B 286 YYFTKIIPALKNLLILRTWAG-----YYAKTPDS---NPAIGRIEELNDYYIAAGFS--G---HGFMMAPAVGEMVAELI 352 (382)
T ss_dssp HHHHHHCGGGGGSEEEEEEEE-----EEEECTTS---CCEEEEESSSBTEEEEECCT--T---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcCCCCceEEEEe-----ccccCCCC---CcEeccCCCCCCEEEEEecC--c---chHhhhHHHHHHHHHHH
Confidence 999999998765444433322 12223322 2211 12357999886555 2 35777899999999999
Q ss_pred HHH
Q 009508 487 VDY 489 (533)
Q Consensus 487 l~~ 489 (533)
+..
T Consensus 353 ~~~ 355 (382)
T 1y56_B 353 TKG 355 (382)
T ss_dssp HHS
T ss_pred hCC
Confidence 864
No 41
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.57 E-value=3.5e-13 Score=144.71 Aligned_cols=56 Identities=16% Similarity=0.256 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhh
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 309 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~ 309 (533)
..++..|.+.+++.|++|+++++|++|..++ +.+ .|.+ +++++.||.||+|+|.+.
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeE-EEEECCCCEEECCEEEECCCcch
Confidence 4688889999999999999999999999886 443 5666 446899999999999884
No 42
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.55 E-value=7.2e-13 Score=132.95 Aligned_cols=41 Identities=29% Similarity=0.464 Sum_probs=37.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
|++|||+|||||++||++|+.|+++|++|+|||+++.+|..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 45699999999999999999999999999999999877653
No 43
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.55 E-value=7e-13 Score=142.50 Aligned_cols=56 Identities=13% Similarity=0.132 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCC-e-eeecCEEEEccChhh
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK-E-TYSAGAVVLAVGIST 309 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~-~-~~~ad~VV~a~~~~~ 309 (533)
..++..|.+.+++.|++|+++++|++|..++ ++ + .|.+++ + ++.||.||+|+|.+.
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~-v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRID-SQ-W-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECS-SS-E-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC-Ce-E-EEEeCCCcEEEECCEEEECCCcch
Confidence 4688889999999999999999999999886 34 3 455554 4 799999999999984
No 44
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.54 E-value=2.3e-12 Score=129.48 Aligned_cols=57 Identities=12% Similarity=0.034 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe----CCeeeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~----~~~~~~ad~VV~a~~~~~~ 310 (533)
.+...|.+.+++.|++|+.+++|++|..++ +.+.+|.. ++.+++||.||.|.|.+..
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~ 163 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEcCEEEECCCcchH
Confidence 355567777778899999999999999876 66654544 2348999999999998863
No 45
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.54 E-value=1.2e-11 Score=124.35 Aligned_cols=58 Identities=28% Similarity=0.386 Sum_probs=47.3
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~ 311 (533)
..+...|.+.+++.|++|+++++|++|+.++ +.+ .+.+++++++||.||+|+|.+...
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v-~v~t~~g~i~a~~VV~A~G~~s~~ 210 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDA--DGV-SVTTDRGTYRAGKVVLACGPYTND 210 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEESSCEEEEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeE-EEEECCCEEEcCEEEEcCCcChHH
Confidence 3577888888888999999999999999875 443 356666789999999999988543
No 46
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.52 E-value=5.2e-12 Score=126.50 Aligned_cols=203 Identities=10% Similarity=0.053 Sum_probs=107.7
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhcc
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 330 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 330 (533)
..+...|.+.+++.|++|+.+++|++|+.++ ++ +.+.++++++.||.||+|+|.+.. .+++.... .
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~--~~v~~~~g~~~a~~vV~A~G~~~~-~l~~~~g~----------~ 215 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISP-DS--VKIETANGSYTADKLIVSMGAWNS-KLLSKLNL----------D 215 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SC--EEEEETTEEEEEEEEEECCGGGHH-HHGGGGTE----------E
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecC-Ce--EEEEeCCCEEEeCEEEEecCccHH-HHhhhhcc----------C
Confidence 4677888999999999999999999999875 33 345667778999999999999854 35443210 1
Q ss_pred CcceeeEEEEEEeccCC--CCC-CCCceeeccCCCccceeeeccccccccCCCC-CeEEEEEec----CCCCCCCCC--H
Q 009508 331 LASIDVVSVKLWFDKKV--TVP-NVSNACSGFGDSLAWTFFDLNKIYDEHKDDS-ATVIQADFY----HANELMPLK--D 400 (533)
Q Consensus 331 l~~~~~~~v~l~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~----~~~~~~~~~--~ 400 (533)
+...+.....+.++... ... .....+.... .....+..+. .++ ..++..... ..+...... .
T Consensus 216 ~pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~y~~p~-------~~g~~~~iG~~~~~~~~~~~~~~~~~~~~ 287 (389)
T 2gf3_A 216 IPLQPYRQVVGFFESDESKYSNDIDFPGFMVEV-PNGIYYGFPS-------FGGCGLKLGYHTFGQKIDPDTINREFGVY 287 (389)
T ss_dssp CCCEEEEEEEEEECCCHHHHBGGGTCCEEEEEE-TTEEEEEECB-------STTCCEEEEESSCCEECCTTTCCCCTTSS
T ss_pred CceEEEEEEEEEEecCcccccccccCCEEEEeC-CCCcEEEcCC-------CCCCcEEEEEcCCCCccCcccccCccCCC
Confidence 11122222223333221 000 0000111000 0001111110 011 222222211 111111122 3
Q ss_pred HHHHHHHHHHHhhhhcCCCCCccccceeeeCCCCccccCCCccccCCCC--CCCCCceEEecccccCCCCCchhhHHHHH
Q 009508 401 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVT 478 (533)
Q Consensus 401 ~ei~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~~p~~--~~~~~~l~~aG~~~~~g~~~~~iegA~~S 478 (533)
++..+.+++.+.++||.+.+ .+...+.. ....+|+. .|-+ ....+|+|++..+. ++ ++.-|...
T Consensus 288 ~~~~~~l~~~~~~~~P~l~~-~~~~~w~g-----~r~~t~D~---~p~ig~~~~~~~l~~a~G~~--g~---G~~~ap~~ 353 (389)
T 2gf3_A 288 PEDESNLRAFLEEYMPGANG-ELKRGAVC-----MYTKTLDE---HFIIDLHPEHSNVVIAAGFS--GH---GFKFSSGV 353 (389)
T ss_dssp HHHHHHHHHHHHHHCGGGCS-CEEEEEEE-----EEEECTTS---CCEEEEETTEEEEEEEECCT--TC---CGGGHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCC-CceEEEEE-----EeccCCCC---CeEEccCCCCCCEEEEECCc--cc---cccccHHH
Confidence 45568899999999998754 33332222 22233332 2211 12357899888666 32 45668899
Q ss_pred HHHHHHHHHHH
Q 009508 479 GLEAANRVVDY 489 (533)
Q Consensus 479 G~~aA~~Il~~ 489 (533)
|+.+|+.|+..
T Consensus 354 g~~la~~i~~~ 364 (389)
T 2gf3_A 354 GEVLSQLALTG 364 (389)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHcCC
Confidence 99999999864
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.51 E-value=2.2e-12 Score=131.79 Aligned_cols=200 Identities=15% Similarity=0.063 Sum_probs=109.7
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEe---------------ccCCceEEEEEeCCeee--ecCEEEEccChhhHHHh
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIY---------------DEERCCISDVVCGKETY--SAGAVVLAVGISTLQEL 313 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~---------------~~~~~~v~~v~~~~~~~--~ad~VV~a~~~~~~~~l 313 (533)
..+...|.+.+++.|++|+.+++|++|.. ++ +.+++|.++++++ .||.||+|+|.+.. .+
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~-~l 257 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSDGTRVEVGEKLVVAAGVWSN-RL 257 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETTSCEEEEEEEEEECCGGGHH-HH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCCCEEeecCCEEEECCCcCHH-HH
Confidence 36888899999999999999999999997 43 5666677776688 99999999999854 35
Q ss_pred hhhccccCchhHHhhccCcceeeEEEEEEeccCCC-CCC----------C-CceeeccCCCccceeeeccccccccCCCC
Q 009508 314 IKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVT-VPN----------V-SNACSGFGDSLAWTFFDLNKIYDEHKDDS 381 (533)
Q Consensus 314 l~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~-~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (533)
++.... .+...+.....+.++.... ... . ...+.. . ...++.+. ++.
T Consensus 258 ~~~~g~----------~~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~-~~~y~~p~-------~~~ 316 (448)
T 3axb_A 258 LNPLGI----------DTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIIL---P-KRVLVRPA-------PRE 316 (448)
T ss_dssp HGGGTC----------CCSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEEE---T-TTEEEEEE-------TTT
T ss_pred HHHcCC----------CCcccccceEEEEeCCcccccccccccccccccCCCceEEc---C-CceEEeec-------CCC
Confidence 443210 1111222222233332210 000 0 000100 0 01111110 111
Q ss_pred CeEEEEEecC---CCCCCC--CCHHHH-HHHHHHHHhhhhcCCCCCccccceeeeCCCCcccc-CCCccccCCCC-CCCC
Q 009508 382 ATVIQADFYH---ANELMP--LKDDQV-VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHF-FPGSYKYMMRG-FTSF 453 (533)
Q Consensus 382 ~~v~~~~~~~---~~~~~~--~~~~ei-~~~~~~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~-~pg~~~~~p~~-~~~~ 453 (533)
+.++...... ...+.. ...++. .+.+++.+.++||.+.+..+...+.. .... +++. .|.+ ..+
T Consensus 317 g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~w~G-----~r~~~t~d~---~p~ig~~~- 387 (448)
T 3axb_A 317 GSFWVQLSDNLGRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAG-----HYDISFDAN---PVVFEPWE- 387 (448)
T ss_dssp TEEEEEECCCTTSCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEEEEE-----EEEEETTSS---CEEECGGG-
T ss_pred CeEEEecCCcccCCcccccccCCChHHHHHHHHHHHHHhCcCcccCCcccceEE-----EeccccCCC---CcEeeecC-
Confidence 4433222221 112222 334556 88999999999998765555444332 1112 3332 1211 112
Q ss_pred CceEEecccccCCCCCchhhHHHHHHHHHHHHHHH
Q 009508 454 PNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 488 (533)
Q Consensus 454 ~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~Il~ 488 (533)
+|+|++..+.. + ++.-|...|+.+|+.|+.
T Consensus 388 ~~l~~a~G~~g--~---G~~~ap~~g~~la~~i~~ 417 (448)
T 3axb_A 388 SGIVVAAGTSG--S---GIMKSDSIGRVAAAVALG 417 (448)
T ss_dssp CSEEEEECCTT--C---CGGGHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCc--h---hHhHhHHHHHHHHHHHcC
Confidence 78998876663 2 355678888888888864
No 48
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.50 E-value=3.3e-12 Score=129.43 Aligned_cols=58 Identities=14% Similarity=0.105 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCC-e--eeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK-E--TYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~-~--~~~ad~VV~a~~~~~~ 310 (533)
.+...|.+.+++.|++|+.+++|++|..++ ++.++.+.+.+ + +++||.||.|+|.+..
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~ 167 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIIDASGYGRV 167 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEECCGGGCH
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEECCCCchh
Confidence 455667777778899999999999999876 45555565554 3 5999999999998864
No 49
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.50 E-value=1.5e-13 Score=135.06 Aligned_cols=67 Identities=33% Similarity=0.475 Sum_probs=54.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC-CCCCCCCc--------------------ccccccccCCCcHHHH
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG-NGFGSPDD--------------------ISMQGFWYPFRNIFSL 103 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~-~~~GG~~~--------------------~G~~~~~~~~~~~~~~ 103 (533)
...+||+|||||++||+||+.|+++|++|+|||++ +++||+.. .|.+.+....+.+.++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~ 121 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLAL 121 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHH
Confidence 45689999999999999999999999999999999 99999821 1223333345568889
Q ss_pred HHHhCCCC
Q 009508 104 VDELGIKP 111 (533)
Q Consensus 104 ~~~lg~~~ 111 (533)
++++|+..
T Consensus 122 ~~~lGl~~ 129 (376)
T 2e1m_A 122 IDKLGLKR 129 (376)
T ss_dssp HHHTTCCE
T ss_pred HHHcCCCc
Confidence 99999873
No 50
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.47 E-value=5.1e-12 Score=132.12 Aligned_cols=223 Identities=17% Similarity=0.053 Sum_probs=113.3
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC----C--eeeecCEEEEccChhhHHHhhhhccccCchh
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGISTLQELIKNSILCNREE 324 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~----~--~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~ 324 (533)
.++...+.+.++++|++|+.+++|++|..++ +.+++|... + .++.||.||+|+|+|... +.......
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~-l~~~~g~~---- 242 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDT-LREKDRSK---- 242 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHH-HHHTTTCC----
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECCEEEECCCcchHH-HHHhcCCC----
Confidence 4688888988999999999999999999876 666656542 2 479999999999998643 32211000
Q ss_pred HHhhccCcceeeEEEEEEeccCCCCCCCCceeeccCCCccceeeeccccccccCCCCCeEEEEEe--cCCCCCCCCCHHH
Q 009508 325 FLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADF--YHANELMPLKDDQ 402 (533)
Q Consensus 325 ~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~e 402 (533)
......+..-.++.++.+.. +....+++... ..+..+|-. + + .+..++..+. +..+.......++
T Consensus 243 ----~~~~v~p~kG~~lvl~~~~~-~~~~~~~~~~~-~dgr~v~~i----P-~--~g~~~iGtT~~~~~~~~~~~~~t~~ 309 (561)
T 3da1_A 243 ----HGKYLKLSKGVHLVVDQSRF-PLRQAVYFDTE-SDGRMIFAI----P-R--EGKTYIGTTDTFYDKDIASPRMTVE 309 (561)
T ss_dssp ----CSSEEEEEEEEEEEEEGGGS-CCSSEEEECCS-SSCCCEEEE----E-E--TTEEEECCCCEEECSCTTCCCCCHH
T ss_pred ----CCceEEeccEEEEEECCccC-CCceEEEeccC-CCCcEEEEE----e-c--CCCEEEcCCCCccCCCcCCCCCCHH
Confidence 01112233334566665432 12222222210 111111111 0 0 1222222211 1112222234566
Q ss_pred HHHHHHHHHhhhhcCCC--CCccccceeeeCCCCcc-ccCCCccccCCC-CCCCCCceE-EecccccCCCCCchhhHHHH
Q 009508 403 VVAKAVSYLSKCIKDFS--TATVMDHKIRRFPKSLT-HFFPGSYKYMMR-GFTSFPNLF-MAGDWITTRHGSWSQERSYV 477 (533)
Q Consensus 403 i~~~~~~~l~~~~p~~~--~~~v~~~~~~r~~~~~~-~~~pg~~~~~p~-~~~~~~~l~-~aG~~~~~g~~~~~iegA~~ 477 (533)
-++.+++.+.++||.+. ..+++..+..-.|.... .-.+... .+.+ +....+|++ ++|.-. ..+-.
T Consensus 310 ~i~~ll~~~~~~~P~l~~~~~~v~~~~aGlRPl~~~~~~~~~~~-sR~~~i~~~~~gli~i~Ggk~---------Tt~r~ 379 (561)
T 3da1_A 310 DRDYILAAANYMFPSLRLTADDVESSWAGLRPLIHEEGKKASEI-SRKDEIFFSDSGLISIAGGKL---------TGYRK 379 (561)
T ss_dssp HHHHHHHHHHHHCTTCCCCTTTEEEEEEEEEEEEEC------------CCEEECSSCCEEECCCCS---------TTHHH
T ss_pred HHHHHHHHHHHhCCCCCCChhhEEEEeEEeccccCCCCCCcccc-ccceEEEecCCCeEEEeCChh---------hhHHH
Confidence 78889999999999865 44555544432111000 0000000 0111 111224443 334322 22455
Q ss_pred HHHHHHHHHHHHhCCCCCcc--cccCCC
Q 009508 478 TGLEAANRVVDYLGDGSFSK--IIPVEE 503 (533)
Q Consensus 478 SG~~aA~~Il~~~g~~~~~~--~~~~~~ 503 (533)
-|..+++.+.+.++...+++ -+||..
T Consensus 380 mAe~~~d~~~~~~~~~~~~~t~~~~l~g 407 (561)
T 3da1_A 380 MAERTVDAVAQGLNVNEPCTTAAIRLSG 407 (561)
T ss_dssp HHHHHHHHHHHHHTCCCCCCTTSCCCTT
T ss_pred HHHHHHHHHHHhcCCCCCCCcCCcccCC
Confidence 78888899999988755554 445544
No 51
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.45 E-value=5.8e-12 Score=126.98 Aligned_cols=64 Identities=23% Similarity=0.324 Sum_probs=43.3
Q ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 42 NNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 42 ~~~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
++..+++||+|||||++||++|+.|+++|++|+|||+.+.++. .|.. ....+...+.++++|+.
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~---~~~~--~~l~~~~~~~l~~lg~~ 81 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP---VGAA--ISVWPNGVKCMAHLGMG 81 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-------CE--EEECHHHHHHHHHTTCH
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC---cCee--EEECHHHHHHHHHCCCH
Confidence 3444568999999999999999999999999999999876532 1110 01124455677777764
No 52
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.40 E-value=2.2e-11 Score=121.11 Aligned_cols=56 Identities=18% Similarity=0.302 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~ 310 (533)
.++..|.+.+++.|++|+.+++|++|+.++ ++ +.+.++++++.||.||+|+|.+..
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~--~~v~~~~g~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDD-DG--VTIETADGEYQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS-SS--EEEEESSCEEEEEEEEECCGGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcC-CE--EEEEECCCeEEcCEEEEcCCccHH
Confidence 677888888889999999999999999876 33 346666667999999999998853
No 53
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.39 E-value=2.8e-12 Score=130.65 Aligned_cols=58 Identities=16% Similarity=0.284 Sum_probs=48.8
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCe-eeecCEEEEccChhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKE-TYSAGAVVLAVGIST 309 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~-~~~ad~VV~a~~~~~ 309 (533)
...+.+.|.+.+++.|++|+++++|++|..++ +.+++|.+.++ +++||.||+|+|.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 34678889999988999999999999999875 66667776654 599999999999877
No 54
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.39 E-value=1.4e-10 Score=119.61 Aligned_cols=57 Identities=28% Similarity=0.303 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCC-eeeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK-ETYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~-~~~~ad~VV~a~~~~~~ 310 (533)
.+...|.+.+++.|++|+++++|++|..++ +.+++|.+++ +++.||.||+|+|.+..
T Consensus 221 ~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 221 TMIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCChh
Confidence 566778888888999999999999999876 6666677664 57999999999999874
No 55
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.39 E-value=3.4e-11 Score=126.17 Aligned_cols=57 Identities=21% Similarity=0.148 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe--CC--eeeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~--~~--~~~~ad~VV~a~~~~~~ 310 (533)
.+...|.+.+++.|++|+.+++|++|..++ +.++.|++ ++ .+++||.||.|.|.+..
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEESEEEECCGGGCH
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEcCEEEECCCCcch
Confidence 566778888888999999999999999864 32233433 44 47999999999998864
No 56
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.38 E-value=9.5e-11 Score=122.37 Aligned_cols=61 Identities=25% Similarity=0.375 Sum_probs=46.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..++||+|||||++||++|+.|+++|++|+|||+++..+.. .... ...+...++++++|+.
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~--~~~~---~l~~~~~~~l~~lGl~ 63 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPY--PRAA---GQNPRTMELLRIGGVA 63 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCC--CCSC---CBCHHHHHHHHHTTCH
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC--Cccc---eECHHHHHHHHHcCCH
Confidence 35689999999999999999999999999999998765421 1111 1234456777777765
No 57
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.36 E-value=3.8e-10 Score=118.14 Aligned_cols=59 Identities=14% Similarity=0.161 Sum_probs=47.9
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-----CCe-eeecCEEEEccChhhHH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-----GKE-TYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-----~~~-~~~ad~VV~a~~~~~~~ 311 (533)
.+++..+.+.+++.|++|+.+++|++|..++ +.+++|.. +++ ++.||.||+|+|+|...
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~ 252 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDK 252 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHH
Confidence 3677888888889999999999999999876 66666653 333 79999999999999543
No 58
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.34 E-value=3.4e-10 Score=124.25 Aligned_cols=58 Identities=14% Similarity=0.156 Sum_probs=50.8
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 310 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~ 310 (533)
..+...|.+.++++|++|+.+++|++|..++ +.+++|.++++++.||.||+|+|.+..
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~~G~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTADGVIPADIVVSCAGFWGA 208 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEECCcEEECCEEEECCccchH
Confidence 3688889999999999999999999999876 666678887779999999999999863
No 59
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.33 E-value=1.5e-10 Score=121.01 Aligned_cols=59 Identities=19% Similarity=0.061 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-C-eeeecCEEEEccChhhHH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~-~~~~ad~VV~a~~~~~~~ 311 (533)
.+...|.+.+++.|++|+++++|++|+.++ ++..+.+... + .+++||.||.|.|.+...
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~v 209 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDA-EAVEVTVAGPSGPYPVRARYGVGCDGGRSTV 209 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCS-SCEEEEEEETTEEEEEEESEEEECSCSSCHH
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CeEEEEEEeCCCcEEEEeCEEEEcCCCCchH
Confidence 455667777777899999999999999876 4544333323 4 489999999999988643
No 60
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.31 E-value=1.3e-11 Score=123.93 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=47.5
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhh
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 309 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~ 309 (533)
..+.+.|.+.+++.|++|+++++|++|..++ +. +.|.+++++++||.||+|+|.+.
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~-~~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SG-FRVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TE-EEEEETTEEEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CE-EEEEECCcEEEeeEEEECCCCcc
Confidence 4677888888988999999999999999876 43 45667767999999999999886
No 61
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.29 E-value=8.1e-10 Score=113.88 Aligned_cols=65 Identities=23% Similarity=0.243 Sum_probs=46.7
Q ss_pred CCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 41 NNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 41 ~~~~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
+++..+++||+|||||++||++|+.|+++|++|+|||+.+.++.. .... ...+...++++.+|+.
T Consensus 5 ~~~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~--~r~~---~l~~~~~~~l~~lGl~ 69 (500)
T 2qa1_A 5 HHHHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGE--SRGL---GFTARTMEVFDQRGIL 69 (500)
T ss_dssp ---CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCC--CCSE---EECHHHHHHHHTTTCG
T ss_pred cCCccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC--CCcc---eECHHHHHHHHHCCCH
Confidence 455667799999999999999999999999999999998766431 1111 1234456777777765
No 62
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.29 E-value=7.8e-10 Score=116.11 Aligned_cols=58 Identities=12% Similarity=0.201 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-------C---------eeeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-------K---------ETYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-------~---------~~~~ad~VV~a~~~~~~ 310 (533)
.+...|.+.+++.|++|+++++|++|..++ ++.+++|.+. + .+++||.||.|.|.+..
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~-~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHE-DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECT-TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 456677888888899999999999999875 4666666553 2 47999999999999864
No 63
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.29 E-value=3.9e-10 Score=115.13 Aligned_cols=57 Identities=23% Similarity=0.236 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEE--e--CCe--eeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV--C--GKE--TYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~--~--~~~--~~~ad~VV~a~~~~~~ 310 (533)
.+.+.|.+.+++.|++|+++++|+++..++ +.+++|+ . +++ +++||.||.|.|.+..
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 355567777777899999999999999876 5554443 2 444 7999999999998864
No 64
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.28 E-value=1.8e-10 Score=119.42 Aligned_cols=57 Identities=16% Similarity=0.134 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEE--eC-C--eeeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV--CG-K--ETYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~--~~-~--~~~~ad~VV~a~~~~~~ 310 (533)
.+...|.+.+++.|++|+.+++|++|..++ +.+.++. .. + .+++||.||.|.|.+..
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 566778888888999999999999999876 6655443 22 3 27999999999998753
No 65
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.28 E-value=1e-09 Score=110.00 Aligned_cols=60 Identities=7% Similarity=-0.020 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCe--eeecCEEEEccChhhHH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKE--TYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~--~~~ad~VV~a~~~~~~~ 311 (533)
.+.+.|.+.+.+.|++|+++++|++|+.+++++..+.+..+++ ++++|.||.|.|.+...
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCST
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHH
Confidence 3555677777778999999999999987641233333324565 69999999999987643
No 66
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.27 E-value=1e-09 Score=113.06 Aligned_cols=62 Identities=27% Similarity=0.260 Sum_probs=46.2
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+++||+|||||++||++|+.|+++|++|+|||+.+..+.. .... ...+...++++++|+.
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~--~r~~---~l~~~~~~~l~~lGl~ 70 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGE--SRGL---GFTARTMEVFDQRGIL 70 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCC--CCSE---EECHHHHHHHHHTTCG
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCC--Ccee---EECHHHHHHHHHCCCH
Confidence 456789999999999999999999999999999998765421 1111 1234456778888875
No 67
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.24 E-value=9.8e-10 Score=113.51 Aligned_cols=58 Identities=19% Similarity=0.144 Sum_probs=46.4
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe----CCe--eeecCEEEEccChhhHH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~----~~~--~~~ad~VV~a~~~~~~~ 311 (533)
.+++..+.+.+++.|++|+.+++|++|..++ + ++++.+ +++ ++.||.||+|+|++...
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~ 212 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARREN--G-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQ 212 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET--T-EEEEEEEETTTCCEEEEEESCEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--C-EEEEEEEECCCCCEEEEECCEEEECCChhHHH
Confidence 4688889999999999999999999999875 3 334444 343 79999999999999643
No 68
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.24 E-value=2.6e-10 Score=119.82 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=47.6
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe---CCe--eeecCEEEEccChhhH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGISTL 310 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~---~~~--~~~ad~VV~a~~~~~~ 310 (533)
+..+...|.+.+++.|++|+++++|++|..++ ++++++|.. +++ ++.||.||+|+|.+..
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD-KGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECT-TSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC-CCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 34688889999989999999999999999864 366655543 344 6899999999998753
No 69
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.23 E-value=1.3e-10 Score=120.39 Aligned_cols=57 Identities=21% Similarity=0.286 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe--CCe--eeecC-EEEEccChhh
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAG-AVVLAVGIST 309 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~--~~~--~~~ad-~VV~a~~~~~ 309 (533)
.+...|.+.+++.|++|+++++|++|..++ ++++++|.. +++ ++.|| .||+|+|.+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~-~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDD-TGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECT-TCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECC-CCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 688899999999999999999999999884 377776654 333 68996 9999999886
No 70
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.20 E-value=3.7e-10 Score=118.50 Aligned_cols=60 Identities=18% Similarity=0.259 Sum_probs=47.8
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe---CCe--eeecCEEEEccChhhH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGISTL 310 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~---~~~--~~~ad~VV~a~~~~~~ 310 (533)
+..+...|.+.+++.|++|+++++|++|..++ ++++++|.. +++ ++.||.||+|+|.+..
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVND-DHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECT-TSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECC-CCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 44688889999999999999999999999864 366655543 343 6899999999998763
No 71
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.20 E-value=2.2e-10 Score=115.19 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceee---------EEEeccCCceEEEEEeCCeeeecCEEEEccChhhH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVT---------DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 310 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~---------~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~ 310 (533)
..+...|.+.+++.|++|+.+++|+ +|..++ +.+ .|.++++++.||.||+|+|.+..
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v-~v~~~~g~i~a~~VV~A~G~~s~ 237 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQ-IVVHETRQIRAGVIIVAAGAAGP 237 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeE-EEEECCcEEECCEEEECCCccHH
Confidence 3577888888888999999999999 887765 444 56666678999999999999853
No 72
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.19 E-value=1.2e-08 Score=108.53 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=45.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSK-QGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~-~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
.++||+|||||++||++|+.|++ .|++|+|||+.+..+. .|. -....+...++++.+|+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~---~g~--a~~l~~~t~e~l~~lGl~ 91 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME---LGQ--ADGIACRTMEMFEAFEFA 91 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS---SCS--CCEECHHHHHHHHHTTCH
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC---CCc--eeeeCHHHHHHHHHcCcH
Confidence 45899999999999999999999 9999999999876542 110 011234456778888865
No 73
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.19 E-value=9.6e-11 Score=115.50 Aligned_cols=190 Identities=12% Similarity=0.050 Sum_probs=104.2
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhhhhccccCchhHHhhcc
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 330 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 330 (533)
..+...|.+.+++.|++|+. ++|++|+..+ .+.||.||+|+|.+... ++++
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-------------~~~a~~VV~A~G~~s~~-l~~~-------------- 192 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA-------------REGADVIVNCTGVWAGA-LQRD-------------- 192 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-------------HTTCSEEEECCGGGGGG-TSCC--------------
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-------------cCCCCEEEECCCcChHh-hcCC--------------
Confidence 46888999999999999998 8998886543 26899999999998643 3322
Q ss_pred CcceeeEEEEEEeccCCCCCCCCceeecc--CCCccceeeeccccccccCCCCCeEEEEEecCCCCCCCCCHHHHHHHHH
Q 009508 331 LASIDVVSVKLWFDKKVTVPNVSNACSGF--GDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAV 408 (533)
Q Consensus 331 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ei~~~~~ 408 (533)
+...+.....+.++.+. . ...++... .......++.+. .+..++..... ...+.....++..+.++
T Consensus 193 ~~l~p~rg~~~~~~~~~-~--~~~~~~~~~~~~~~~~~y~~p~--------~~~~~iGg~~~-~~~~~~~~~~~~~~~l~ 260 (351)
T 3g3e_A 193 PLLQPGRGQIMKVDAPW-M--KHFILTHDPERGIYNSPYIIPG--------TQTVTLGGIFQ-LGNWSELNNIQDHNTIW 260 (351)
T ss_dssp TTCEEEEEEEEEEECTT-C--CSEEEECCTTTCTTCSCEEEEC--------SSCEEEECCCE-ETCCCCSCCHHHHHHHH
T ss_pred CceeecCCcEEEEeCCC-c--ceEEEeccccCCCCceeEEEeC--------CCcEEEeeeee-cCCCCCCCCHHHHHHHH
Confidence 11122222223333321 1 11111100 000011122111 12222221111 11222234567788899
Q ss_pred HHHhhhhcCCCCCccccceeeeCCCCccccCCCcccc-CC--CCCCCCCceEEecccccCCCCCchhhHHHHHHHHHHHH
Q 009508 409 SYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY-MM--RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANR 485 (533)
Q Consensus 409 ~~l~~~~p~~~~~~v~~~~~~r~~~~~~~~~pg~~~~-~p--~~~~~~~~l~~aG~~~~~g~~~~~iegA~~SG~~aA~~ 485 (533)
+.+.++||.+.+..+...+.. ....+|+ ... .| +.....+|+|++..+. + .++.-|...|+..|+.
T Consensus 261 ~~~~~~~P~l~~~~i~~~w~G-----~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~--g---~G~~~ap~~g~~la~l 329 (351)
T 3g3e_A 261 EGCCRLEPTLKNARIIGERTG-----FRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHG--G---YGLTIHWGCALEAAKL 329 (351)
T ss_dssp HHHHHHCGGGGGCEEEEEEEE-----EEEECSS-CEEEEEEECCSSSCEEEEEEECCT--T---CHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccCCcEeeeeEe-----eCCCCCC-ccceeeeccCCCCCCeEEEEeCCC--c---chHhhhHHHHHHHHHH
Confidence 999999998765555444433 2222333 100 00 1112257899887665 3 3577789999999999
Q ss_pred HHHHhCC
Q 009508 486 VVDYLGD 492 (533)
Q Consensus 486 Il~~~g~ 492 (533)
|.+.++.
T Consensus 330 i~~~~~~ 336 (351)
T 3g3e_A 330 FGRILEE 336 (351)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988863
No 74
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.15 E-value=2.4e-10 Score=114.27 Aligned_cols=57 Identities=14% Similarity=0.117 Sum_probs=47.2
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEec----cCCceEEEEEeCCeeeecCEEEEccChhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD----EERCCISDVVCGKETYSAGAVVLAVGIST 309 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~----~~~~~v~~v~~~~~~~~ad~VV~a~~~~~ 309 (533)
...+.+.+.+.+++.|++|+++++|++|..+ + +. +.+.+++++++||.||+|+|.+.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~--~~-~~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK--VR-FVLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS--CC-EEEEETTEEEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC--Ce-EEEEECCCEEECCEEEECCCCcc
Confidence 4467788888888899999999999999976 4 33 35666666899999999999886
No 75
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.13 E-value=6.4e-10 Score=110.10 Aligned_cols=39 Identities=33% Similarity=0.549 Sum_probs=34.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
+++||+|||||++|+++|++|+++|++|+|||+....+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 458999999999999999999999999999999865443
No 76
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.09 E-value=1.7e-10 Score=123.92 Aligned_cols=74 Identities=23% Similarity=0.404 Sum_probs=56.3
Q ss_pred cccccCCCCcceeecCcCCcccCCCc--cccCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 12 CLSKRRYRNGFCCRASTLQSNANGDR--NSTNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
|...........|..+|..++..... .........++||+|||||++||+||+.|+++|++|+|+|+++.+||.
T Consensus 354 C~~~~~~~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~ 429 (690)
T 3k30_A 354 CVSGDLTMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGR 429 (690)
T ss_dssp HHHHHHTTSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTH
T ss_pred hhhcccCCCcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCE
Confidence 44433345567899999888653211 111233445689999999999999999999999999999999999986
No 77
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.07 E-value=2.3e-09 Score=107.87 Aligned_cols=60 Identities=22% Similarity=0.186 Sum_probs=42.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
++|+|||||++||++|..|+++|++|+|||+.+.+.-+ ..|. .+ ...++..+.++++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~-~~G~-~i-~l~~~~~~~L~~lg~~ 61 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSI-LPGY-GI-HINSFGKQALQECLPA 61 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSS-CCCC-EE-EECHHHHHHHHHHSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcC-CCce-EE-eeCHHHHHHHHHcCCh
Confidence 68999999999999999999999999999998654321 1111 01 1124455667777654
No 78
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.04 E-value=2.1e-09 Score=102.41 Aligned_cols=39 Identities=36% Similarity=0.580 Sum_probs=36.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQ-GFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~GG 84 (533)
..+||+|||||++||++|+.|+++ |.+|+|+|+.+.+||
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg 77 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGG 77 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCC
Confidence 457999999999999999999997 999999999988876
No 79
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.04 E-value=1.1e-09 Score=110.56 Aligned_cols=63 Identities=17% Similarity=0.221 Sum_probs=50.3
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHHHhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll 314 (533)
...+.+.+.+.+++.|++|+++++|++|..++ +++..+.+. ++++.||.||+|+|......++
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~ 256 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPADIVIVGIGIVPCVGAL 256 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEESSSCEEECSEEEECSCCEESCHHH
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECCCCccChHHH
Confidence 45677778888899999999999999999875 666667664 5589999999999976544444
No 80
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.00 E-value=1.1e-09 Score=108.03 Aligned_cols=40 Identities=30% Similarity=0.557 Sum_probs=37.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
.++||+|||||++|+++|+.|+++|++|+|+|+++.+||.
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~ 41 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGA 41 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 3589999999999999999999999999999999988873
No 81
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.00 E-value=1.1e-08 Score=107.21 Aligned_cols=59 Identities=22% Similarity=0.229 Sum_probs=46.0
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe---CCe--eeecCEEEEccChhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 309 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~---~~~--~~~ad~VV~a~~~~~ 309 (533)
+..+...|.+.+++.|++|+++++|++|..++ ++++++|.. +++ ++.||.||+|+|.+.
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~-~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA-SGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECC-CCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 34678889999999999999999999998763 266655543 343 689999999999765
No 82
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.00 E-value=3.7e-09 Score=105.24 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHH
Q 009508 252 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 252 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~ 311 (533)
.+...|.+.+++.|++|+++++|++|+. + + . ++. +++++++|.||.|.|.....
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~-~--v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V--G-R--LTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T--T-E--EEETTSCEEECSEEEECCCTTCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C-E--EEECCCCEEEcCEEEECCCccHHH
Confidence 4556677777778999999999999987 4 4 2 333 45589999999999988653
No 83
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.98 E-value=1.7e-09 Score=111.30 Aligned_cols=59 Identities=24% Similarity=0.269 Sum_probs=46.0
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~ 311 (533)
...+...+.+.+++.|++|+++++|++|..++ +.+ .+... ++++.+|.||+|+|.....
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCY-NVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEECCCcEEEcCEEEEeeCCCcCC
Confidence 34677788888889999999999999999875 433 34444 4589999999999976433
No 84
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.97 E-value=1.1e-08 Score=102.69 Aligned_cols=64 Identities=22% Similarity=0.252 Sum_probs=50.9
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHHHhhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIK 315 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~ 315 (533)
...+.+.+.+.+++.|++|+++++|++|..++ +.+.++... ++++.+|.||+|+|......++.
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~ 247 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAA 247 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSEEEECCCEEECCHHHH
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECcCCccCHHHHH
Confidence 45677888888899999999999999999875 666667765 45899999999999765444443
No 85
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.97 E-value=3e-09 Score=106.69 Aligned_cols=58 Identities=21% Similarity=0.181 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHhc-CCEEEcCceeeEEEeccCCceEE-EEEeC-CeeeecCEEEEccChhhHH
Q 009508 252 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCIS-DVVCG-KETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 252 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~~~v~-~v~~~-~~~~~ad~VV~a~~~~~~~ 311 (533)
.+.+.|.+.+++. |++|+++++|++|+.++ ++ ++ .++.. ++++++|.||.|.|.+...
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-~~-v~g~v~~~~g~~~~ad~vV~AdG~~s~v 168 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE-RH-AIDQVRLNDGRVLRPRVVVGADGIASYV 168 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT-TS-CEEEEEETTSCEEEEEEEEECCCTTCHH
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-Cc-eEEEEEECCCCEEECCEEEECCCCChHH
Confidence 4566678888887 99999999999999876 33 31 34444 4589999999999998753
No 86
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.95 E-value=3.2e-09 Score=102.25 Aligned_cols=41 Identities=24% Similarity=0.341 Sum_probs=33.9
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 43 NGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 43 ~~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
+.|++|||+|||||++||+||++|+++|++|+|+|++ ..||
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg 42 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRN 42 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGG
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCC
Confidence 4678899999999999999999999999999999986 3444
No 87
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.94 E-value=2.2e-08 Score=105.06 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=47.2
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe----CCe--eeecCEEEEccChhhH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 310 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~----~~~--~~~ad~VV~a~~~~~~ 310 (533)
+..+...|.+.+++.|++|+.+++|++|..++ ++++.++.. +++ ++.|+.||+|+|.+..
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 34688889998888999999999999999863 266666553 233 6899999999998753
No 88
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.93 E-value=3.3e-09 Score=110.37 Aligned_cols=40 Identities=38% Similarity=0.651 Sum_probs=37.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
..++||||||||++|+++|+.|++.|++|+|||+++.+||
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG 58 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGG 58 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 4568999999999999999999999999999999998887
No 89
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.93 E-value=2e-08 Score=106.33 Aligned_cols=59 Identities=14% Similarity=0.121 Sum_probs=47.2
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe---C-Ce--eeecCEEEEccChhhH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-KE--TYSAGAVVLAVGISTL 310 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~---~-~~--~~~ad~VV~a~~~~~~ 310 (533)
+..+...|.+.+.+.|++|+.++.|++|..++ +++.++.. . ++ .+.|+.||+|+|.+..
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 34688889988888899999999999999875 77666543 2 33 4899999999998753
No 90
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.92 E-value=2e-08 Score=104.29 Aligned_cols=62 Identities=19% Similarity=0.234 Sum_probs=47.7
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceE--EEEEeCC-e-eeecCEEEEccChhhHHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCI--SDVVCGK-E-TYSAGAVVLAVGISTLQE 312 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v--~~v~~~~-~-~~~ad~VV~a~~~~~~~~ 312 (533)
...+...+.+.+++.|++|+++++|++|..++ ++.+ +.+.+++ + ++.+|.||+|+|......
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDA-NGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECT-TSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcC-CCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 45677888888999999999999999999754 3533 3455544 4 799999999999775443
No 91
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.92 E-value=3.4e-07 Score=97.51 Aligned_cols=60 Identities=25% Similarity=0.236 Sum_probs=45.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSK-----QGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~-----~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
.++||+|||||++||++|..|++ .|++|+|||+.+.... .| . -..-.+...++++.+|+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~---~g-r-a~~l~~~tle~l~~lGl~ 71 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVY---NG-Q-ADGLQCRTLESLKNLGLA 71 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCC---SC-S-CCEECHHHHHHHHTTTCH
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCC---CC-c-eeEEChHHHHHHHHCCCH
Confidence 35799999999999999999999 9999999999864321 11 0 011234566788888875
No 92
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.92 E-value=1.2e-08 Score=102.09 Aligned_cols=63 Identities=27% Similarity=0.336 Sum_probs=46.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIKP 111 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~~ 111 (533)
+.++||+|||||++||++|+.|+++|++|+|+|+.+.... ..|. .+ ...+...+.++++|+..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~--~~~~-g~-~l~~~~~~~l~~~g~~~ 65 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLS--GFGT-GI-VVQPELVHYLLEQGVEL 65 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCC--CCSC-EE-ECCHHHHHHHHHTTCCG
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC--cccc-cc-ccChhHHHHHHHcCCcc
Confidence 4568999999999999999999999999999999865311 1111 00 11345667888888764
No 93
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.90 E-value=3.9e-09 Score=107.96 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=46.6
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEE-eCCeeeecCEEEEccChhhHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV-CGKETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~-~~~~~~~ad~VV~a~~~~~~~ 311 (533)
...+.+.+.+.+++.|++|+++++|++|..++ ++. +.+. ++++++.+|.||+|+|.....
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~-~~v~~~~~g~i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADA-DGR-RVATTMKHGEIVADQVMLALGRMPNT 270 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSC-EEEEESSSCEEEESEEEECSCEEESC
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CCE-EEEEEcCCCeEEeCEEEEeeCcccCC
Confidence 44677888888999999999999999999875 343 3455 544449999999999976543
No 94
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.90 E-value=1.6e-08 Score=93.09 Aligned_cols=55 Identities=15% Similarity=0.054 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHhc-CCEEEcCceeeEEEeccCCceEEEEEeCC-eeeecCEEEEccChhh
Q 009508 252 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCGK-ETYSAGAVVLAVGIST 309 (533)
Q Consensus 252 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~~~v~~v~~~~-~~~~ad~VV~a~~~~~ 309 (533)
.+...+.+.+++. |++++ +++|++|..++ +.++++.+++ .++.||.||+|+|.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG--NRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 3445677777886 99998 67999999876 6666666654 4899999999999753
No 95
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.90 E-value=8.1e-09 Score=106.30 Aligned_cols=41 Identities=32% Similarity=0.410 Sum_probs=37.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
....+||+|||||++||++|..|++.|++|+|||+.+.+|+
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 34568999999999999999999999999999999987764
No 96
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.89 E-value=5.3e-09 Score=106.66 Aligned_cols=60 Identities=10% Similarity=0.084 Sum_probs=47.9
Q ss_pred cchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHH
Q 009508 249 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 249 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~ 311 (533)
+...+.+.+.+.+++.|++|+++++|++|..++ +.+ .+.++++++.+|.||+|+|.....
T Consensus 187 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v-~v~~~~g~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 187 FDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA--NGI-VLETSEQEISCDSGIFALNLHPQL 246 (452)
T ss_dssp CCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS--SCE-EEEESSCEEEESEEEECSCCBCCC
T ss_pred CCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--CeE-EEEECCCEEEeCEEEECcCCCCCh
Confidence 345677888888999999999999999999765 444 566666699999999999976433
No 97
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.89 E-value=8.4e-09 Score=107.16 Aligned_cols=40 Identities=30% Similarity=0.444 Sum_probs=35.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
...+||||||||++||+||+.|++ |.+|+|||+.+..+|.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 446899999999999999999999 9999999999877663
No 98
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.89 E-value=2e-08 Score=101.01 Aligned_cols=60 Identities=23% Similarity=0.378 Sum_probs=44.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCe-EEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFD-VTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~-V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
.++||+|||||++||++|+.|+++|++ |+|||+.+.++.. ..| . ...+...+.++++|+.
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~-g~g-~---~l~~~~~~~l~~lg~~ 63 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPL-GVG-I---NIQPAAVEALAELGLG 63 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCC-SCE-E---EECHHHHHHHHHTTCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccc-eeE-E---EEChHHHHHHHHCCCh
Confidence 358999999999999999999999999 9999998766431 111 1 1134456777777764
No 99
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.88 E-value=6.8e-09 Score=101.14 Aligned_cols=39 Identities=21% Similarity=0.267 Sum_probs=36.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
.++||+|||||++||++|+.|+++|++|+|+|+++.+||
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG 44 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGG 44 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 357999999999999999999999999999999988887
No 100
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.88 E-value=7.8e-09 Score=107.42 Aligned_cols=40 Identities=25% Similarity=0.473 Sum_probs=37.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
+.++||||||||++|+++|+.|++.|++|+|||+++.+||
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG 46 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG 46 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 4568999999999999999999999999999999998887
No 101
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.87 E-value=2.7e-08 Score=95.63 Aligned_cols=39 Identities=36% Similarity=0.565 Sum_probs=36.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~--G~~V~vlE~~~~~GG 84 (533)
..+||+|||||++||++|+.|+++ |++|+|||+.+.+||
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GG 118 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGG 118 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCC
Confidence 358999999999999999999997 999999999988776
No 102
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.86 E-value=4.5e-08 Score=102.82 Aligned_cols=59 Identities=10% Similarity=0.110 Sum_probs=47.8
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe----CCe--eeecCEEEEccChhhH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 310 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~----~~~--~~~ad~VV~a~~~~~~ 310 (533)
+..+...|.+.+.+.|++|+.++.|++|..++ +++.++.. +++ .+.|+.||+|+|.+..
T Consensus 154 G~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 34688889988888999999999999999875 77766653 233 6899999999998764
No 103
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.85 E-value=5.5e-08 Score=99.40 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=45.7
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe--CCeeeecCEEEEccChhhH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGISTL 310 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~--~~~~~~ad~VV~a~~~~~~ 310 (533)
..+...|.+.+++.|++|+.+++| +|..++ +.+.++.. .++++.+|.||+|+|.+..
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 467788888887789999999999 998875 67666654 3457889999999998753
No 104
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.84 E-value=1.6e-08 Score=98.74 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=33.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.++++||+|||||++||++|+.|+++|++|+|||+.+
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~ 55 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM 55 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4456899999999999999999999999999999954
No 105
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.83 E-value=4.1e-08 Score=101.78 Aligned_cols=58 Identities=22% Similarity=0.205 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCe-eeecCEEEEccChhhH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKE-TYSAGAVVLAVGISTL 310 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~-~~~ad~VV~a~~~~~~ 310 (533)
..+...|.+.+++.|++++.+ +|++|..++ ++.++.|.+.++ +++||.||.|.|.+..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDE-RGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 357777888888899999999 999999864 466666766544 8999999999998754
No 106
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.83 E-value=2.7e-08 Score=99.60 Aligned_cols=64 Identities=20% Similarity=0.255 Sum_probs=45.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
++++||+|||||++||++|+.|+++|++|+|||+.+.++.+. .|.. +........+.++++|+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~-~g~~-~~~~~~~~~~~l~~~gl~ 87 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARI-FGGT-LDLHKGSGQEAMKKAGLL 87 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCC-CSCC-EECCTTTHHHHHHHTTCH
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccc-cCCe-eeeCCccHHHHHHhcChH
Confidence 456899999999999999999999999999999987665431 1211 111112345667777764
No 107
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.83 E-value=2e-08 Score=104.80 Aligned_cols=58 Identities=19% Similarity=0.206 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCC-eeeecCEEEEccChhhH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK-ETYSAGAVVLAVGISTL 310 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~-~~~~ad~VV~a~~~~~~ 310 (533)
..+...|.+.+++.|++++.+ +|++|..++ ++.++.|.+.+ .+++||.||.|.|.+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNN-RGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcC-CCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 356777888888899999999 899999865 46555666654 48999999999998754
No 108
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.83 E-value=2.4e-08 Score=98.57 Aligned_cols=39 Identities=15% Similarity=0.385 Sum_probs=36.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
.++||+|||||++||++|+.|+++|++|+|||+++.+||
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg 51 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGG 51 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC
Confidence 358999999999999999999999999999999988776
No 109
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.82 E-value=7.5e-09 Score=107.42 Aligned_cols=39 Identities=31% Similarity=0.603 Sum_probs=36.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHH-HCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLS-KQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~-~~G~~V~vlE~~~~~GG 84 (533)
.++||+|||||++|+++|+.|+ +.|++|+|||+++.+||
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GG 46 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGG 46 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCC
Confidence 4589999999999999999999 88999999999988887
No 110
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.82 E-value=1.2e-08 Score=102.69 Aligned_cols=61 Identities=16% Similarity=0.228 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHHHhh
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
..+.+.+.+.+++.|++|+++++|++|..++ .+..+.. +++++.+|.||+|+|......++
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~ 246 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMASDGRSFVADSALICVGAEPADQLA 246 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEETTSCEEECSEEEECSCEEECCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEECCCCEEEcCEEEEeeCCeecHHHH
Confidence 4566777888888999999999999998753 3334555 45689999999999977544444
No 111
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.82 E-value=2.5e-08 Score=97.32 Aligned_cols=39 Identities=23% Similarity=0.386 Sum_probs=36.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
.++||+|||||++|+++|+.|+++|++|+|+|+++.+||
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg 42 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGG 42 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 468999999999999999999999999999999988776
No 112
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.81 E-value=2.3e-08 Score=96.91 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
+++||+|||||++||++|+.|+++|++|+|+|++ +||
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg 50 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGG 50 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTG
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCC
Confidence 4689999999999999999999999999999998 776
No 113
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.81 E-value=5.3e-08 Score=102.38 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=46.9
Q ss_pred hhhHHHHHHHHHhcC-CEEEcCceeeEEEeccCCceEEEEEe----CCe--eeecCEEEEccChhhHH
Q 009508 251 EKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~~~v~~v~~----~~~--~~~ad~VV~a~~~~~~~ 311 (533)
..+...|.+.+++.| ++|+.+++|++|..++ +++.++.. +++ .+.|+.||+|+|.+...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 467888888888888 9999999999999876 66665532 344 68999999999987543
No 114
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.80 E-value=4.7e-08 Score=101.56 Aligned_cols=57 Identities=14% Similarity=0.211 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHh-cCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~ 310 (533)
.+...|.+.+++ .|++++.+ +|++|..++ ++.++.+.+. +++++||.||.|.|.+..
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQ-HGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecC-CCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 566778888888 89999999 699998865 4665566654 457999999999998753
No 115
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.79 E-value=9.1e-09 Score=106.28 Aligned_cols=61 Identities=11% Similarity=0.115 Sum_probs=47.1
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHHHh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQEL 313 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~~l 313 (533)
...+...+.+.+++.|++|+++++|++|..++ +.+ .+.. ++.++.+|.||+|+|......+
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTRTG--AGV-LVTMTDGRTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEEECCSS
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CEE-EEEECCCcEEEcCEEEECCCCCcCCCc
Confidence 44677788888899999999999999999765 333 3444 4558999999999997754433
No 116
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.79 E-value=2.3e-08 Score=104.20 Aligned_cols=40 Identities=30% Similarity=0.539 Sum_probs=37.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
+.++||+|||||++|+++|+.|++.|++|+|||+++.+||
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG 53 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 3468999999999999999999999999999999998887
No 117
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.79 E-value=7.3e-08 Score=92.11 Aligned_cols=39 Identities=26% Similarity=0.508 Sum_probs=36.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~--G~~V~vlE~~~~~GG 84 (533)
..+||+|||||++||++|+.|+++ |++|+|+|+++.+||
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 346999999999999999999998 999999999988876
No 118
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.79 E-value=3.4e-08 Score=103.11 Aligned_cols=57 Identities=18% Similarity=0.194 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHhc-CCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~ 310 (533)
.+...|.+.+++. |++|+++ +|++|..++ ++.++.|.+. +.++.||.||.|+|.+..
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~-~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDA-NGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECT-TSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 5777888888888 9999999 999998865 4666667665 447999999999998753
No 119
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.78 E-value=5.2e-08 Score=99.15 Aligned_cols=40 Identities=28% Similarity=0.410 Sum_probs=37.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGNGFGSP 85 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~~~~GG~ 85 (533)
+.+||+|||||++||++|..|++.|. +|+|||+++.+||.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~ 46 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGV 46 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCe
Confidence 46899999999999999999999999 99999999999886
No 120
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.77 E-value=5.3e-08 Score=99.23 Aligned_cols=64 Identities=14% Similarity=0.230 Sum_probs=50.7
Q ss_pred cchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 249 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 249 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
+...+.+.+.+.+++.|++|+++++|++|..++ +.+..+..+++++.+|.||+|+|......++
T Consensus 189 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 189 FDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDGKEIKSDIAILCIGFRPNTELL 252 (452)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTSCEEEESEEEECCCEEECCGGG
T ss_pred hhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCCCEEECCEEEECcCCCCCHHHH
Confidence 345677788888999999999999999998754 5555566677789999999999977554444
No 121
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.76 E-value=3.7e-08 Score=103.91 Aligned_cols=61 Identities=11% Similarity=0.159 Sum_probs=46.4
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ ...+++++.+|.||+|+|......++
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v--~~~~g~~i~~D~Vi~a~G~~p~~~~l 287 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENG--AVV--RLKSGSVIQTDMLILAIGVQPESSLA 287 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG--TEE--EETTSCEEECSEEEECSCEEECCHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCC--CEE--EECCCCEEEcCEEEEccCCCCChHHH
Confidence 45677888888999999999999999998764 322 22345689999999999976543343
No 122
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.76 E-value=6.4e-08 Score=95.77 Aligned_cols=38 Identities=37% Similarity=0.735 Sum_probs=35.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~~~GG 84 (533)
+++||+|||||++|+++|+.|++.|+ +|+|||+++ +||
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg 41 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGH 41 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCC
Confidence 45899999999999999999999999 999999987 776
No 123
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.75 E-value=1e-07 Score=97.67 Aligned_cols=65 Identities=18% Similarity=0.243 Sum_probs=49.6
Q ss_pred CcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 248 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 248 ~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
.....+.+.+.+.+++.|++|+++++|++|..++ +.+..+..+++++.+|.||+|+|......++
T Consensus 199 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~ 263 (472)
T 3iwa_A 199 FTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVARVITDKRTLDADLVILAAGVSPNTQLA 263 (472)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEESSCEEECSEEEECSCEEECCHHH
T ss_pred ccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEEEEEeCCCEEEcCEEEECCCCCcCHHHH
Confidence 3345677888888999999999999999998855 5444344556689999999999986543343
No 124
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.75 E-value=3.9e-08 Score=100.68 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=47.6
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~ 311 (533)
...+.+.+.+.+++.|++|+++++|++|..++ +. +.+.++++++.+|.||+|+|.+...
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD--GE-FVLTTTHGELRADKLLVATGRTPNT 273 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEET--TE-EEEEETTEEEEESEEEECSCEEESC
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CE-EEEEECCcEEEcCEEEECCCCCcCC
Confidence 44677888888999999999999999998764 43 3456667789999999999987543
No 125
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.75 E-value=4.4e-08 Score=100.62 Aligned_cols=60 Identities=13% Similarity=0.079 Sum_probs=45.0
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCC--------eeeecCEEEEccChhhH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--------ETYSAGAVVLAVGISTL 310 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~--------~~~~ad~VV~a~~~~~~ 310 (533)
...+.+.+.+.+++.|++|+++++|++|..++ ++..+.+...+ .++.+|.||+|+|....
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTL-SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECS-SSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcC-CCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 44667778888899999999999999998765 35223344431 57899999999996543
No 126
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.73 E-value=8e-08 Score=98.89 Aligned_cols=63 Identities=19% Similarity=0.305 Sum_probs=47.8
Q ss_pred cchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 249 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 249 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
+...+.+.+.+.+++.|++|+++++|++|..+ +.+..+..+++++.+|.||+|+|......++
T Consensus 234 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~v~~v~~~g~~i~~D~Vi~a~G~~p~~~ll 296 (490)
T 2bc0_A 234 YDRDLTDLMAKNMEEHGIQLAFGETVKEVAGN---GKVEKIITDKNEYDVDMVILAVGFRPNTTLG 296 (490)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEETCCEEEEECS---SSCCEEEESSCEEECSEEEECCCEEECCGGG
T ss_pred HHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC---CcEEEEEECCcEEECCEEEECCCCCcChHHH
Confidence 34567777888889999999999999999863 3333355577789999999999976444333
No 127
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.73 E-value=5.7e-08 Score=98.25 Aligned_cols=64 Identities=20% Similarity=0.318 Sum_probs=48.3
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEe--ccCCceEEEEEeC-CeeeecCEEEEccChhhHHHhhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIK 315 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~--~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~~ll~ 315 (533)
...+.+.+.+.+++.|++|+++++|++|.. ++ +.+..+... +.++.+|.||+|+|......++.
T Consensus 190 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~ 256 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLPADLVIAGIGLIPNCELAS 256 (431)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEETTSCEEECSEEEECCCEEECCHHHH
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEEcCEEEECCCCCcCcchhh
Confidence 445667788888899999999999999987 43 555456554 55899999999999764433443
No 128
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.72 E-value=5.6e-08 Score=99.15 Aligned_cols=59 Identities=22% Similarity=0.238 Sum_probs=46.0
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~ 311 (533)
...+.+.+.+.+++.|++|+++++|++|+.++ +.+ .+.. ++.++.+|.||+|+|.....
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA--KGA-RVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE-EEEECCCeEEEcCEEEECcCCCcCC
Confidence 34677778888888999999999999999765 433 3444 45689999999999976543
No 129
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.72 E-value=1.3e-07 Score=98.50 Aligned_cols=55 Identities=20% Similarity=0.158 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHh-cCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhh
Q 009508 252 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 309 (533)
Q Consensus 252 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~ 309 (533)
.+...+.+.+++ .|++| ++++|+.|..++ +.+++|.+. +.++.||.||+|+|.+.
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 455667777777 69999 578999999875 667677765 45899999999999874
No 130
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.71 E-value=1.1e-07 Score=96.81 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=45.3
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 310 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~ 310 (533)
...+.+.+.+.+++.|++|+++++|++|..++ ++.+ .+.. +++++.+|.||+|+|....
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~-~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 207 DPMISETLVEVMNAEGPQLHTNAIPKAVVKNT-DGSL-TLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp CHHHHHHHHHHHHHHSCEEECSCCEEEEEECT-TSCE-EEEETTSCEEEESEEEECSCEEES
T ss_pred hHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CcEE-EEEECCCcEEEcCEEEECCCCCcC
Confidence 44567778888889999999999999998764 3433 3444 4558999999999986643
No 131
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.69 E-value=4.4e-09 Score=92.23 Aligned_cols=99 Identities=11% Similarity=0.105 Sum_probs=69.1
Q ss_pred CCCCCCCHHHHHHHHHHHHhhhh-cCCCCCccccc--eeeeCCC------CccccCCCccc-cCCCCCCCCCceEEeccc
Q 009508 393 NELMPLKDDQVVAKAVSYLSKCI-KDFSTATVMDH--KIRRFPK------SLTHFFPGSYK-YMMRGFTSFPNLFMAGDW 462 (533)
Q Consensus 393 ~~~~~~~~~ei~~~~~~~l~~~~-p~~~~~~v~~~--~~~r~~~------~~~~~~pg~~~-~~p~~~~~~~~l~~aG~~ 462 (533)
..+..++++++.+.++++|.++| |+. ..+... ...+|.. ++..+.||+.. ..+....+.++|||||++
T Consensus 49 ~~~~~l~~~e~~~~~l~~L~~~~g~~~--~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe~ 126 (181)
T 2e1m_C 49 ARWDSFDDAERYGYALENLQSVHGRRI--EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGEH 126 (181)
T ss_dssp HHHTTSCTTTTHHHHHHHHHHHHCGGG--GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSGG
T ss_pred HHHHcCCHHHHHHHHHHHHHHHhCCCc--HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEHH
Confidence 34556788999999999999999 554 233334 4455532 22344566542 223334567899999999
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHhCCCCC
Q 009508 463 ITTRHGSWSQERSYVTGLEAANRVVDYLGDGSF 495 (533)
Q Consensus 463 ~~~g~~~~~iegA~~SG~~aA~~Il~~~g~~~~ 495 (533)
++. ++ ++|+||+.||.+||++|++.++...+
T Consensus 127 ts~-~~-g~~eGAl~SG~raA~~i~~~l~~~~~ 157 (181)
T 2e1m_C 127 VSL-KH-AWIEGAVETAVRAAIAVNEAPVGDTG 157 (181)
T ss_dssp GTT-ST-TSHHHHHHHHHHHHHHHHTCCC----
T ss_pred HcC-Cc-cCHHHHHHHHHHHHHHHHHHhccCCC
Confidence 995 76 89999999999999999999976433
No 132
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.69 E-value=1.2e-07 Score=97.08 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=35.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-----CeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQG-----FDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G-----~~V~vlE~~~~~GG 84 (533)
..+||||||||++||++|..|++.| .+|+|||+++.+|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 4579999999999999999999999 99999999987764
No 133
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.68 E-value=2.5e-07 Score=81.36 Aligned_cols=53 Identities=15% Similarity=0.087 Sum_probs=40.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhh
Q 009508 253 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 309 (533)
Q Consensus 253 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~ 309 (533)
+.+.+.+.+++.|++++++ +|++|+.++ ++ +.+.++++++.+|.||+|+|...
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~-~~--~~v~~~~g~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMG-GV--FEVETEEGVEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECS-SS--EEEECSSCEEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcC-CE--EEEEECCCEEEECEEEECCCCCC
Confidence 3344666777889999999 999999875 33 33555555899999999999764
No 134
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.68 E-value=6.1e-08 Score=100.45 Aligned_cols=57 Identities=18% Similarity=0.124 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHh-cCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHH
Q 009508 252 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 252 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~ 311 (533)
.+...|.+.+++ .|++| ++++|++|..++ +.+.+|.+. +.++.||.||+|+|.+...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKN--NQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 455667777777 59999 578999999876 667777765 4589999999999986443
No 135
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.68 E-value=1.9e-07 Score=97.33 Aligned_cols=60 Identities=15% Similarity=0.232 Sum_probs=45.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+||+|||||++||++|+.|+++|++|+|||+.+..+.. ..... ..+...++++.+|+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~--~~~~~---l~~~~~~~l~~lGl~ 84 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITH--PRVGT---IGPRSMELFRRWGVA 84 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSS--CCCCE---ECHHHHHHHHHTTCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC--Cceee---eCHHHHHHHHHcCCh
Confidence 4579999999999999999999999999999999776531 11111 124456777888765
No 136
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.68 E-value=6.4e-08 Score=94.34 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD 78 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~ 78 (533)
.++||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 458999999999999999999999999999998
No 137
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.67 E-value=1.4e-07 Score=91.09 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+.|||+|||||++||+||.+|++.|++|+|+|++.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 35899999999999999999999999999999874
No 138
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.66 E-value=2.3e-07 Score=89.43 Aligned_cols=37 Identities=24% Similarity=0.427 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~~~GG 84 (533)
++||+|||||++|+++|+.|+++|+ +|+|+|++ .+||
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg 38 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGG 38 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTC
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCc
Confidence 3799999999999999999999999 99999995 5665
No 139
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.66 E-value=2.9e-07 Score=97.32 Aligned_cols=58 Identities=17% Similarity=0.221 Sum_probs=45.9
Q ss_pred hhhHHHHHHHHHhc--CCEEEcCceeeEEEeccCC--ceEEEEEe----CCe--eeecCEEEEccChhh
Q 009508 251 EKIFEPWMDSMRTR--GCEFLDGRRVTDFIYDEER--CCISDVVC----GKE--TYSAGAVVLAVGIST 309 (533)
Q Consensus 251 ~~l~~~l~~~l~~~--G~~i~~~~~V~~I~~~~~~--~~v~~v~~----~~~--~~~ad~VV~a~~~~~ 309 (533)
..+...|.+.++++ |++|+.++.|+++..++ + |+++++.. +++ .+.|+.||+|+|...
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 35778888888887 99999999999999886 3 37777643 232 689999999999765
No 140
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.66 E-value=3.2e-07 Score=93.64 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=44.8
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCe-eeecCEEEEccChhhH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGISTL 310 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~-~~~ad~VV~a~~~~~~ 310 (533)
...+.+.+.+.+++.|++|+++++|++|..++ ++ +.+.. +++ ++.+|.||+|+|....
T Consensus 206 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~--~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 206 DPLLSATLAENMHAQGIETHLEFAVAALERDA-QG--TTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEESSCCEEEEEEET-TE--EEEEETTCCEEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-Ce--EEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 44566778888899999999999999998765 23 33444 455 7999999999997643
No 141
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.66 E-value=1.8e-07 Score=93.12 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=47.3
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHHHhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .+.. +++++.+|.||+|+|......++
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~i~~d~vv~a~G~~p~~~l~ 248 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EGL-EAHLSDGEVIPCDLVVSAVGLRPRTELA 248 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEECCHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC--CEE-EEEECCCCEEECCEEEECcCCCcCHHHH
Confidence 44567788888889999999999999998765 433 3444 45689999999999977544343
No 142
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.65 E-value=2.5e-07 Score=95.22 Aligned_cols=42 Identities=24% Similarity=0.434 Sum_probs=36.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
.++++||+|||||++|++||+.|++.|++|+|+|+++.+||.
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~ 63 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGT 63 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 345689999999999999999999999999999999888883
No 143
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.64 E-value=1.5e-07 Score=96.58 Aligned_cols=62 Identities=21% Similarity=0.275 Sum_probs=48.6
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
...+.+.+.+.+++.|++|+++++|++|..+ +.+..+.++++++.+|.||+|+|......++
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~~~~~i~~D~vi~a~G~~p~~~~l 287 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKGN---ERVEAVETDKGTYKADLVLVSVGVKPNTDFL 287 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES---SBEEEEEETTEEEECSEEEECSCEEESCGGG
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEECCCEEEcCEEEECcCCCcChHHH
Confidence 4467778888889999999999999999865 3344566677789999999999976543344
No 144
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.63 E-value=8.5e-07 Score=94.09 Aligned_cols=58 Identities=19% Similarity=0.261 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHhc-CC-EEEcCceeeEEEeccCC--ceEEEEEe----CCe--eeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTR-GC-EFLDGRRVTDFIYDEER--CCISDVVC----GKE--TYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~-G~-~i~~~~~V~~I~~~~~~--~~v~~v~~----~~~--~~~ad~VV~a~~~~~~ 310 (533)
.+...+.+.+++. |+ +|+.++.|+++..++ + +++.++.. +++ .+.|+.||+|+|....
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~-~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDN-NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECT-TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcC-CccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 4667777778777 99 999999999999876 2 27776652 233 6899999999998753
No 145
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.63 E-value=2.8e-08 Score=96.60 Aligned_cols=66 Identities=23% Similarity=0.286 Sum_probs=47.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHH--CCCeEEEEcCCCCCCCCCccccccccc--CCCcHHHHHHHhCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSK--QGFDVTVLDDGNGFGSPDDISMQGFWY--PFRNIFSLVDELGIK 110 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~--~G~~V~vlE~~~~~GG~~~~G~~~~~~--~~~~~~~~~~~lg~~ 110 (533)
...+||+|||||++||+||++|++ .|++|+|||+++.+||.+-.|...+.. .......+++++|++
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~ 132 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCE
Confidence 345799999999999999999985 499999999999999975444322211 112344555666654
No 146
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.63 E-value=3.4e-07 Score=93.39 Aligned_cols=38 Identities=16% Similarity=0.505 Sum_probs=36.1
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCe---EEEEcCCCCCCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSK---QGFD---VTVLDDGNGFGSP 85 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~---~G~~---V~vlE~~~~~GG~ 85 (533)
+||+|||||++||++|..|++ .|++ |+|||+++.+||.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~ 46 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQ 46 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCE
Confidence 699999999999999999999 9999 9999999989884
No 147
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.63 E-value=1.2e-07 Score=97.68 Aligned_cols=60 Identities=12% Similarity=0.085 Sum_probs=45.6
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCee-eecCEEEEccChhhHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKET-YSAGAVVLAVGISTLQ 311 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~-~~ad~VV~a~~~~~~~ 311 (533)
...+.+.+.+.+++.|++|+++++|++|..++ ++.+ .+.. ++++ +.+|.||+|+|.....
T Consensus 216 d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~-~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 216 DESVINVLENDMKKNNINIVTFADVVEIKKVS-DKNL-SIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTCE-EEEETTSCEEEEESEEEECCCBCCTT
T ss_pred chhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-CceE-EEEECCCcEEEECCEEEECCCCCcCC
Confidence 45677788888999999999999999998764 2433 3444 4456 8999999999976443
No 148
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.63 E-value=2e-07 Score=94.85 Aligned_cols=62 Identities=19% Similarity=0.250 Sum_probs=47.0
Q ss_pred cchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 249 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 249 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
+...+.+.+.+.+++. ++++++++|++|..++ .+..+..+++++.+|.||+|+|......++
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~---~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~ 249 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE---RVEKVVTDAGEYKAELVILATGIKPNIELA 249 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS---SCCEEEETTEEEECSEEEECSCEEECCHHH
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC---cEEEEEeCCCEEECCEEEEeeCCccCHHHH
Confidence 3456677788888888 9999999999998653 233456677899999999999976443344
No 149
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.62 E-value=3e-07 Score=89.21 Aligned_cols=38 Identities=29% Similarity=0.458 Sum_probs=35.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
.++||+|||||++|+++|+.|++.|++|+|+|++ .+||
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg 44 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGG 44 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCc
Confidence 3589999999999999999999999999999998 5666
No 150
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.61 E-value=2.2e-07 Score=89.93 Aligned_cols=38 Identities=24% Similarity=0.362 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
+++||+|||||++|+++|+.|++.|++|+|+|+. .+||
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg 41 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGG 41 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCc
Confidence 4589999999999999999999999999999964 5565
No 151
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.61 E-value=1.8e-07 Score=98.15 Aligned_cols=64 Identities=14% Similarity=0.275 Sum_probs=47.6
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEec------------------cCCceEEEEEeCCeeeecCEEEEccChhhHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD------------------EERCCISDVVCGKETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~------------------~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~ 311 (533)
...+...+.+.+++.|++|+++++|++|..+ . ++.+..+..+++++.+|.||+|+|.....
T Consensus 191 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 191 DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHI-KGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCT-TCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccC-CCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 3466777888888999999999999999873 2 24444344456689999999999976543
Q ss_pred Hhh
Q 009508 312 ELI 314 (533)
Q Consensus 312 ~ll 314 (533)
.++
T Consensus 270 ~l~ 272 (565)
T 3ntd_A 270 QLA 272 (565)
T ss_dssp HHH
T ss_pred HHH
Confidence 343
No 152
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.61 E-value=1.2e-07 Score=95.27 Aligned_cols=54 Identities=9% Similarity=-0.007 Sum_probs=42.3
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 309 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~ 309 (533)
...+.+.+.+.+++.|++++++++|++|+.+ + .+..+++++.+|.||+|+|...
T Consensus 217 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~---~---v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 217 SPNSRKAVASIYNQLGIKLVHNFKIKEIREH---E---IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEECSS---E---EEETTSCEEECSEEEEECCEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCceEEECCC---e---EEECCCCEEeeeEEEECCCCCc
Confidence 3567778888889999999999999999743 2 1234566899999999998653
No 153
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.60 E-value=3.9e-07 Score=93.49 Aligned_cols=44 Identities=20% Similarity=0.369 Sum_probs=39.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCccc
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDIS 89 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G 89 (533)
.++||+|||||++|+++|+.|++.|++|+|+|+++.+||....|
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~G 45 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALG 45 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcC
Confidence 46899999999999999999999999999999998888754444
No 154
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.60 E-value=6.1e-08 Score=98.11 Aligned_cols=38 Identities=32% Similarity=0.589 Sum_probs=35.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSK--QGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~--~G~~V~vlE~~~~~GG 84 (533)
++||||||||++|+++|+.|++ .|++|+|+|+++.+++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~ 41 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF 41 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc
Confidence 4699999999999999999999 8999999999987765
No 155
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.59 E-value=3.1e-07 Score=87.71 Aligned_cols=34 Identities=29% Similarity=0.627 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
++||+|||||++||++|..|+++|++|+|+|+++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4799999999999999999999999999999874
No 156
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=5.8e-07 Score=92.00 Aligned_cols=41 Identities=24% Similarity=0.525 Sum_probs=37.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
+.++||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~ 44 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGT 44 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccc
Confidence 35689999999999999999999999999999999888884
No 157
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.57 E-value=5.1e-07 Score=93.97 Aligned_cols=56 Identities=16% Similarity=0.063 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHhc-CCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhH
Q 009508 252 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 310 (533)
Q Consensus 252 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~ 310 (533)
.+...+.+.+++. |++|+ +..|+.+..++ +.+.+|.+. +.++.||.||+|+|.+..
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~--g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS--GKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC--CEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 3556677777774 89995 56899998876 677666665 458999999999998744
No 158
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.57 E-value=3.6e-07 Score=95.12 Aligned_cols=56 Identities=20% Similarity=0.250 Sum_probs=43.9
Q ss_pred HhcCCEEEcCceeeEEEeccC--CceEEEEEeC---Ce--eeecC-EEEEccChhhHHHhhhhc
Q 009508 262 RTRGCEFLDGRRVTDFIYDEE--RCCISDVVCG---KE--TYSAG-AVVLAVGISTLQELIKNS 317 (533)
Q Consensus 262 ~~~G~~i~~~~~V~~I~~~~~--~~~v~~v~~~---~~--~~~ad-~VV~a~~~~~~~~ll~~~ 317 (533)
++.+.+|++++.|++|..+.+ ++++++|+.. +. ++.|+ .||+|+|.....+||..+
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lS 301 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYS 301 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHc
Confidence 456899999999999998721 3688888753 32 57786 699999999998887765
No 159
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.54 E-value=8.3e-07 Score=90.77 Aligned_cols=38 Identities=21% Similarity=0.423 Sum_probs=36.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
++||+|||||++|++||..|++.|++|+|+|+++.+||
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG 39 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGG 39 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 58999999999999999999999999999999988887
No 160
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.52 E-value=9.4e-07 Score=89.78 Aligned_cols=62 Identities=23% Similarity=0.354 Sum_probs=47.4
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
...+.+.+.+.+++.|++|+++++|++|..++ .+..+..+++++.+|.||+|+|......++
T Consensus 190 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~v~~v~~~~~~i~~d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 190 DKEFTDVLTEEMEANNITIATGETVERYEGDG---RVQKVVTDKNAYDADLVVVAVGVRPNTAWL 251 (447)
T ss_dssp CHHHHHHHHHHHHTTTEEEEESCCEEEEECSS---BCCEEEESSCEEECSEEEECSCEEESCGGG
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEccC---cEEEEEECCCEEECCEEEECcCCCCChHHH
Confidence 45677788888889999999999999998653 333455666789999999999976543343
No 161
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.50 E-value=3.7e-07 Score=93.84 Aligned_cols=59 Identities=12% Similarity=0.072 Sum_probs=44.1
Q ss_pred CCcchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-C----eeeecCEEEEccChh
Q 009508 247 GTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K----ETYSAGAVVLAVGIS 308 (533)
Q Consensus 247 g~~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~----~~~~ad~VV~a~~~~ 308 (533)
..+.+.+.+.+.+.|+++|++|++|++|++|+.+ +.+..+... + +++.+|.||+|+|..
T Consensus 268 ~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~---~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 268 NMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK---QLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEETTEEEEEECSS---EEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred cCCCHHHHHHHHHHHHhcceeeecCceEEEEeCC---ceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 3445677888888899999999999999999754 333333332 2 369999999999854
No 162
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.50 E-value=5.6e-07 Score=92.31 Aligned_cols=38 Identities=26% Similarity=0.526 Sum_probs=36.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
++||+|||||++|+++|..|++.|++|+|+|+++.+||
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG 42 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGG 42 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCC
Confidence 58999999999999999999999999999999888877
No 163
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.49 E-value=8.7e-07 Score=85.25 Aligned_cols=36 Identities=31% Similarity=0.541 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
++||+|||||++|+++|..|++.|++|+|+|+ ..||
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG 36 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGG 36 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCc
Confidence 47999999999999999999999999999985 3565
No 164
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.49 E-value=1.1e-06 Score=90.13 Aligned_cols=38 Identities=26% Similarity=0.514 Sum_probs=36.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
++||+|||||++|+++|..|++.|++|+|+|+++.+||
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG 43 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGG 43 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 58999999999999999999999999999999888876
No 165
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.48 E-value=4.8e-07 Score=89.83 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
+.++.+|+|||||++|++||..|...+.+|+|+|+++..
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 446789999999999999999997779999999998654
No 166
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.47 E-value=1e-06 Score=89.94 Aligned_cols=37 Identities=24% Similarity=0.442 Sum_probs=34.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
++||+|||||++|+++|..|++.|++|+|+|++ .+||
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG 39 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGG 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCC
Confidence 589999999999999999999999999999998 5665
No 167
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.46 E-value=1.2e-07 Score=91.60 Aligned_cols=41 Identities=24% Similarity=0.361 Sum_probs=35.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
+...|||+|||||++||+||.+|++.|++|+|+|++ .+||.
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~ 43 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQ 43 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGG
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCe
Confidence 345799999999999999999999999999999985 56663
No 168
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.45 E-value=2.1e-06 Score=88.46 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=47.8
Q ss_pred HHHHHHHHHhcC-CEEEcCceeeEEEeccCCceEEEEEe---CC-----eeeecCEEEEccChhhHHHhhhhc
Q 009508 254 FEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELIKNS 317 (533)
Q Consensus 254 ~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~~~v~~v~~---~~-----~~~~ad~VV~a~~~~~~~~ll~~~ 317 (533)
...+.+.+++.| ++|++++.|++|..+++++++++|+. ++ .++.|+.||+|+|.....+++...
T Consensus 224 ~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~S 296 (504)
T 1n4w_A 224 DKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRA 296 (504)
T ss_dssp TTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhc
Confidence 344555566665 99999999999998752247788765 33 268899999999999877776554
No 169
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.45 E-value=9.3e-07 Score=91.52 Aligned_cols=38 Identities=29% Similarity=0.557 Sum_probs=34.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
+..+||+|||||++|+++|..|+++|++|+|+|+ .+||
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG 247 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGG 247 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTG
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCC
Confidence 4568999999999999999999999999999996 4666
No 170
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.45 E-value=1.7e-07 Score=96.77 Aligned_cols=63 Identities=14% Similarity=0.021 Sum_probs=48.7
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
.+.+...+.+.+++.|+++++++.|+++...+ +.+.....+++++.+|.|++|+|-......+
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L 324 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKILVEFSDKTSELYDTVLYAIGRKGDIDGL 324 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEEEEEETTSCEEEESEEEECSCEEESCGGG
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEecC--CeEEEEEcCCCeEEEEEEEEcccccCCcccc
Confidence 45677888888999999999999999999876 5544334455688999999999966544333
No 171
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.44 E-value=2.4e-07 Score=93.65 Aligned_cols=36 Identities=31% Similarity=0.540 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G--~~V~vlE~~~~~ 82 (533)
.++|||||||.+|+++|..|++.+ ++|+|+|++++.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 358999999999999999999865 799999998753
No 172
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.42 E-value=2.6e-06 Score=86.71 Aligned_cols=37 Identities=32% Similarity=0.551 Sum_probs=34.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
++||+|||||++|+++|..|++.|++|+|+|++ .+||
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG 39 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGG 39 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCC
Confidence 589999999999999999999999999999998 6776
No 173
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.40 E-value=7.7e-07 Score=92.52 Aligned_cols=53 Identities=19% Similarity=0.250 Sum_probs=42.9
Q ss_pred hcCCEEEcCceeeEEEeccCCceEEEEEe--CCe--eeecCEEEEccChhhHHHhhhhc
Q 009508 263 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGISTLQELIKNS 317 (533)
Q Consensus 263 ~~G~~i~~~~~V~~I~~~~~~~~v~~v~~--~~~--~~~ad~VV~a~~~~~~~~ll~~~ 317 (533)
..+.+|..++.|++|..++ +++++|.. .++ .+.++.||+|+|...+.+||..+
T Consensus 223 r~nl~v~~~~~v~~i~~~~--~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~S 279 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG--NQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRS 279 (526)
T ss_dssp CTTEEEECSCEEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred CCCeEEEeCCEEEEEEecC--CeEEEEEEEecCceEEEeecceEEcccccCCcchhhhc
Confidence 3478999999999999986 77766654 332 67899999999999999888765
No 174
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.40 E-value=2.8e-07 Score=98.64 Aligned_cols=74 Identities=24% Similarity=0.298 Sum_probs=56.1
Q ss_pred cccccccCCCCcceeecCcCCcccCCCccccCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCC
Q 009508 10 TLCLSKRRYRNGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD 86 (533)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 86 (533)
+.|..........+|..+|..+..... ...+...++||+|||||++|++||..|+++|++|+|+|+++.+||.+
T Consensus 339 ~~C~~~~~~~~~~~C~~np~~~~e~~~---~~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~ 412 (671)
T 1ps9_A 339 QACLDQIFVGKVTSCLVNPRACHETKM---PILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQF 412 (671)
T ss_dssp TTTHHHHHTTCCCCCSSCTTTTCTTTS---CCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTH
T ss_pred cccchhccCCCceEEEeCccccccccc---CCCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCee
Confidence 345554333456779998887754321 11233456899999999999999999999999999999999999973
No 175
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.37 E-value=2e-06 Score=87.08 Aligned_cols=36 Identities=28% Similarity=0.589 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSK---QGFDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~---~G~~V~vlE~~~~~ 82 (533)
++||||||||++|+++|..|++ .|++|+|+|+++..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4799999999999999999999 89999999999764
No 176
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.37 E-value=3.8e-07 Score=98.26 Aligned_cols=75 Identities=23% Similarity=0.351 Sum_probs=54.7
Q ss_pred cccc-cCCCCcceeecCcCCcccCC--CccccCCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCC
Q 009508 12 CLSK-RRYRNGFCCRASTLQSNANG--DRNSTNNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD 86 (533)
Q Consensus 12 ~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 86 (533)
|... ........|..+|..+.... ...........++||+|||||++||+||+.|+++|++|+|+|+++.+||.+
T Consensus 351 C~~~~~~~~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~ 428 (729)
T 1o94_A 351 CISRWEIGGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHL 428 (729)
T ss_dssp HHHHHHHSSSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTH
T ss_pred hcccccccCCceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCee
Confidence 5543 23344567888888775421 001112234456899999999999999999999999999999999999973
No 177
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.35 E-value=6.2e-07 Score=89.80 Aligned_cols=37 Identities=30% Similarity=0.491 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDGNGFG 83 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G--~~V~vlE~~~~~G 83 (533)
.++|||||||.+|+++|.+|++.| .+|+|||+++...
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~ 40 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYY 40 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCC
Confidence 368999999999999999998875 5899999987643
No 178
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.35 E-value=1.4e-05 Score=82.36 Aligned_cols=63 Identities=13% Similarity=0.070 Sum_probs=47.1
Q ss_pred HHHHHHHHHhc-CCEEEcCceeeEEEeccCCc-eEEEEEe---CC-----eeeecCEEEEccChhhHHHhhhhc
Q 009508 254 FEPWMDSMRTR-GCEFLDGRRVTDFIYDEERC-CISDVVC---GK-----ETYSAGAVVLAVGISTLQELIKNS 317 (533)
Q Consensus 254 ~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~~-~v~~v~~---~~-----~~~~ad~VV~a~~~~~~~~ll~~~ 317 (533)
..++...+++. +++|++++.|++|..++ ++ ++++|+. ++ .++.|+.||+|+|.....+++...
T Consensus 229 ~~~~l~~a~~~~n~~i~~~~~v~~i~~~~-~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~S 301 (507)
T 1coy_A 229 DKTYLAQAAATGKLTITTLHRVTKVAPAT-GSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSM 301 (507)
T ss_dssp TTTHHHHHHHTTCEEEECSEEEEEEEECS-SSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECC-CCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhc
Confidence 34455555555 49999999999999875 34 6777765 33 268899999999999877776544
No 179
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.35 E-value=3.8e-06 Score=84.90 Aligned_cols=59 Identities=10% Similarity=0.129 Sum_probs=44.5
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
.+.+.+.+.+.+++.|++++++++|++++.+ . .+..+++++.+|.||+|+|......++
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~----~--v~~~~g~~~~~D~vl~a~G~~Pn~~~~ 245 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAINGN----E--ITFKSGKVEHYDMIIEGVGTHPNSKFI 245 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEETT----E--EEETTSCEEECSEEEECCCEEESCGGG
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecCC----e--eeecCCeEEeeeeEEEEeceecCcHHH
Confidence 4567788889999999999999999988633 2 123456689999999999965433333
No 180
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.32 E-value=2e-06 Score=89.23 Aligned_cols=56 Identities=21% Similarity=0.143 Sum_probs=42.9
Q ss_pred HhcCCEEEcCceeeEEEec---cCCceEEEEEeC---C-e--eeec-CEEEEccChhhHHHhhhhc
Q 009508 262 RTRGCEFLDGRRVTDFIYD---EERCCISDVVCG---K-E--TYSA-GAVVLAVGISTLQELIKNS 317 (533)
Q Consensus 262 ~~~G~~i~~~~~V~~I~~~---~~~~~v~~v~~~---~-~--~~~a-d~VV~a~~~~~~~~ll~~~ 317 (533)
.+.+.+|++++.|++|..+ ++.+++++|+.. + . ++.| +.||+|+|...+.+||..+
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lS 284 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLS 284 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHT
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhc
Confidence 4568999999999999987 212566777642 2 2 5778 6799999999998888766
No 181
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.28 E-value=5.2e-06 Score=85.41 Aligned_cols=41 Identities=20% Similarity=0.052 Sum_probs=32.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
....+||||||+|++||++|+.|.++|...+++|+.+..|+
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 44568999999999999999999998888888887766554
No 182
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.24 E-value=8e-07 Score=90.12 Aligned_cols=45 Identities=31% Similarity=0.418 Sum_probs=40.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCccc
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDIS 89 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G 89 (533)
...+||+|||||++||++|+.|+++|++|+|||+.+.+||.+..|
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g 164 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG 164 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec
Confidence 456899999999999999999999999999999999999974444
No 183
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.20 E-value=7.5e-07 Score=85.81 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=36.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEE-EcCCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTV-LDDGNGFGSP 85 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~v-lE~~~~~GG~ 85 (533)
..++||+|||||++||++|+.|+++|++|+| +|+ +.+||.
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~ 42 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQ 42 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGG
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCce
Confidence 3568999999999999999999999999999 999 678886
No 184
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.20 E-value=1.3e-06 Score=90.42 Aligned_cols=36 Identities=31% Similarity=0.450 Sum_probs=33.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+.++||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 346899999999999999999999999999999964
No 185
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.16 E-value=1.1e-06 Score=88.73 Aligned_cols=36 Identities=42% Similarity=0.553 Sum_probs=32.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.+++||+|||||++||++|+.|+++|++|+|||+.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 345799999999999999999999999999999986
No 186
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.15 E-value=9.9e-07 Score=90.12 Aligned_cols=39 Identities=33% Similarity=0.542 Sum_probs=37.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
++||+|||||++|+++|..|++.|++|+|+|+.+.+||.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~ 42 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGN 42 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 589999999999999999999999999999999889884
No 187
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.12 E-value=1.7e-06 Score=83.60 Aligned_cols=38 Identities=37% Similarity=0.581 Sum_probs=34.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
++||+|||||++|+++|+.|+++|++|+|+|+. .+||.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 53 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGL 53 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCcc
Confidence 589999999999999999999999999999994 67775
No 188
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.10 E-value=1.4e-06 Score=89.29 Aligned_cols=41 Identities=24% Similarity=0.435 Sum_probs=38.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
+.++||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~ 44 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGT 44 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCc
Confidence 35689999999999999999999999999999999889885
No 189
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.08 E-value=1.4e-06 Score=89.67 Aligned_cols=39 Identities=26% Similarity=0.551 Sum_probs=35.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
.++||+|||||.+|++||..|++.|++|+|+|++. +||.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGt 45 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTT 45 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCc
Confidence 35899999999999999999999999999999974 7775
No 190
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.06 E-value=2.9e-06 Score=87.20 Aligned_cols=41 Identities=29% Similarity=0.481 Sum_probs=36.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcC--------CCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD--------GNGFGSP 85 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~--------~~~~GG~ 85 (533)
..++||+|||||++|++||..|++.|++|+|+|+ ...+||.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGt 52 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGT 52 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCe
Confidence 4569999999999999999999999999999998 4567774
No 191
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.05 E-value=2.6e-06 Score=82.93 Aligned_cols=40 Identities=28% Similarity=0.457 Sum_probs=35.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
+.++||+|||||++|+++|+.|++.|++|+|+|+. .+||.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 45689999999999999999999999999999975 56663
No 192
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.04 E-value=3.7e-06 Score=86.33 Aligned_cols=61 Identities=18% Similarity=0.122 Sum_probs=43.7
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceE-EEEEeCC----eeeecCEEEEccChhhHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCI-SDVVCGK----ETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v-~~v~~~~----~~~~ad~VV~a~~~~~~~ 311 (533)
...+.+.+.+.+++.|++|+++++|++|..++ ++.+ +.+.... .++.+|.||+|+|.....
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~ 291 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQD-DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLV 291 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECT-TSCEEEEEEETTTCCEEEEEESEEEECSCEEECC
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCcEEEEEecCCCCceeEEEcCEEEECcccccCc
Confidence 44567778888888999999999999998764 3433 2222221 278999999999865443
No 193
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.02 E-value=3.6e-06 Score=83.54 Aligned_cols=35 Identities=29% Similarity=0.467 Sum_probs=32.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGNGF 82 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~--G~~V~vlE~~~~~ 82 (533)
+||+|||||++||++|+.|+++ |++|+|+|+.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998765
No 194
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.01 E-value=4e-06 Score=88.40 Aligned_cols=40 Identities=33% Similarity=0.385 Sum_probs=36.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
..+||+|||||++|+++|+.|+++|++|+|||+.+..||.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGL 84 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCc
Confidence 3589999999999999999999999999999999988873
No 195
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.00 E-value=3.2e-06 Score=86.65 Aligned_cols=59 Identities=8% Similarity=0.061 Sum_probs=43.8
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CC-eeeecCEEEEccChhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-ETYSAGAVVLAVGIST 309 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~-~~~~ad~VV~a~~~~~ 309 (533)
...+.+.+.+.+++.|++|+++++|++|..++ ++.++.+.. ++ .++.+|.||+|+|...
T Consensus 225 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 225 DECIQNTITDHYVKEGINVHKLSKIVKVEKNV-ETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcC-CCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 44667778888888999999999999998764 242233444 44 5799999999999654
No 196
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.97 E-value=3.3e-06 Score=86.09 Aligned_cols=59 Identities=10% Similarity=0.083 Sum_probs=44.2
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEE-EEEeC--Ce--eeecCEEEEccChhhH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCIS-DVVCG--KE--TYSAGAVVLAVGISTL 310 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~-~v~~~--~~--~~~ad~VV~a~~~~~~ 310 (533)
...+.+.+.+.+++.|++|+++++|++|..++ +.+. .+..+ ++ ++.+|.||+|+|....
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKKK--DGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC--CEEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 44567778888889999999999999998765 3332 22224 44 7999999999996643
No 197
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.97 E-value=4.4e-06 Score=85.81 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=45.9
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeC-CeeeecCEEEEccChhhHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~-~~~~~ad~VV~a~~~~~~~ 311 (533)
...+...+.+.+++.|++|+++++|++|..++ ++.+ .+... ++++.+|.||+|+|.....
T Consensus 230 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~-~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 230 DSELRKQLTEQLRANGINVRTHENPAKVTKNA-DGTR-HVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCCEEEEEECT-TSCE-EEEETTSCEEEESEEEECSCEEESC
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEE-EEEECCCcEEEcCEEEEccCCCcCc
Confidence 34677788888899999999999999998765 2333 34444 4589999999999976443
No 198
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=4e-06 Score=85.40 Aligned_cols=39 Identities=18% Similarity=0.411 Sum_probs=36.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP 85 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~ 85 (533)
.++||+|||||++|++||..|++.|++|+|+|+ +.+||.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~ 42 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGT 42 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCc
Confidence 468999999999999999999999999999999 678875
No 199
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.96 E-value=7.5e-06 Score=79.16 Aligned_cols=36 Identities=31% Similarity=0.381 Sum_probs=33.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~G 83 (533)
+||+|||||.+|+.||+.|+++|++|+|+|+++..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 799999999999999999999999999999987544
No 200
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.91 E-value=0.00011 Score=74.90 Aligned_cols=36 Identities=25% Similarity=0.454 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEI 204 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 468999999999999999999999999999988653
No 201
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.84 E-value=8.8e-06 Score=82.52 Aligned_cols=41 Identities=27% Similarity=0.122 Sum_probs=37.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-C------CCeEEEEcCCCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSK-Q------GFDVTVLDDGNGFGSPD 86 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~-~------G~~V~vlE~~~~~GG~~ 86 (533)
.++||+|||||++|+++|..|++ . |++|+|||+.+.+||.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~ 49 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV 49 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc
Confidence 45799999999999999999999 7 99999999998898864
No 202
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.83 E-value=0.00016 Score=73.45 Aligned_cols=35 Identities=29% Similarity=0.564 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
.++|+|||+|.+|+-+|..|++.|.+|+|+|+.++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 47899999999999999999999999999998743
No 203
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.83 E-value=6.4e-06 Score=84.68 Aligned_cols=60 Identities=17% Similarity=0.214 Sum_probs=45.7
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHH
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQ 311 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~ 311 (533)
...+...+.+.+++.|++|+++++|++|..++ ++.+ .+.. +++++.+|.||+|+|.....
T Consensus 234 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~-~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 234 DETIREEVTKQLTANGIEIMTNENPAKVSLNT-DGSK-HVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEEECT-TSCE-EEEETTSCEEEESEEEECSCEEECC
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CceE-EEEECCCcEEEcCEEEECCCCcccc
Confidence 44667788888899999999999999998764 2332 3444 45589999999999976443
No 204
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.82 E-value=0.00015 Score=74.06 Aligned_cols=35 Identities=29% Similarity=0.446 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||||..|+-.|..|++.|.+|+|+|+.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 47899999999999999999999999999998754
No 205
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.80 E-value=1.5e-05 Score=80.83 Aligned_cols=43 Identities=30% Similarity=0.253 Sum_probs=38.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCCCCCCCCCcc
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDGNGFGSPDDI 88 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G--~~V~vlE~~~~~GG~~~~ 88 (533)
.++||+|||||++|+.+|..|++.| ++|+|||+.+.+||.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~ 49 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRF 49 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeec
Confidence 4689999999999999999999998 999999999999886433
No 206
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.79 E-value=7.5e-06 Score=84.07 Aligned_cols=39 Identities=26% Similarity=0.492 Sum_probs=36.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPD 86 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~ 86 (533)
++||+|||||++||++|++|++. ++|+|||+++++||..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~ 146 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDM 146 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCee
Confidence 46999999999999999999999 9999999999999873
No 207
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.79 E-value=1.3e-05 Score=89.63 Aligned_cols=40 Identities=28% Similarity=0.537 Sum_probs=37.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNGFGSP 85 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~~~GG~ 85 (533)
..+||+|||||++||+||+.|++.|+ +|+|+|+.+.+||.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~ 226 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL 226 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcc
Confidence 46899999999999999999999999 79999999999986
No 208
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.00016 Score=73.98 Aligned_cols=37 Identities=30% Similarity=0.497 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
...+++|||+|..|+-.|..|++.|.+|+|+|+.+++
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 3468999999999999999999999999999988653
No 209
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.76 E-value=1.4e-05 Score=88.57 Aligned_cols=41 Identities=37% Similarity=0.490 Sum_probs=38.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCc
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDD 87 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~ 87 (533)
++||+|||||++|++||..|++.|++|+|||+++.+||++-
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57999999999999999999999999999999999999743
No 210
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.72 E-value=2.3e-05 Score=78.37 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=44.5
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHHHhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
...+...+.+.+++.|++|+++++|++|. + + .+.. +++++.+|.||+|+|......++
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~ 244 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSV--D--G---VVLLDDGTRIAADMVVVGIGVLANDALA 244 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEE--T--T---EEEETTSCEEECSEEEECSCEEECCHHH
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C--C---EEEECCCCEEEcCEEEECcCCCccHHHH
Confidence 44567778888899999999999999998 3 3 2333 45689999999999976543344
No 211
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.72 E-value=0.00032 Score=71.62 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 46899999999999999999999999999998754
No 212
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.72 E-value=0.00032 Score=71.34 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 47899999999999999999999999999998743
No 213
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.72 E-value=0.00014 Score=72.57 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 578999999999999999999999999999988653
No 214
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.71 E-value=0.00018 Score=73.53 Aligned_cols=35 Identities=26% Similarity=0.447 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||||..|+-.|..|++.|.+|+|+|+.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 57899999999999999999999999999998743
No 215
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.71 E-value=2.5e-05 Score=81.40 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=46.4
Q ss_pred HHHHHHHHh-cCCEEEcCceeeEEEeccCCceEEEEEeC----Ce--ee---ecCEEEEccChhhHHHhhhhc
Q 009508 255 EPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TY---SAGAVVLAVGISTLQELIKNS 317 (533)
Q Consensus 255 ~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~~~v~~v~~~----~~--~~---~ad~VV~a~~~~~~~~ll~~~ 317 (533)
.++.+.+.+ .|++|++++.|++|..++ +++++|+.. ++ ++ .++.||+|+|.+...+++...
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~s 269 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQS 269 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHc
Confidence 345555554 589999999999999875 778888763 32 33 789999999998877776654
No 216
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.70 E-value=0.00024 Score=72.89 Aligned_cols=36 Identities=22% Similarity=0.316 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQ---GFDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~---G~~V~vlE~~~~~ 82 (533)
..+++|||+|..|+-.|..|++. |.+|+|+|+.+++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 46899999999999999999999 9999999987653
No 217
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.69 E-value=0.00023 Score=73.00 Aligned_cols=36 Identities=22% Similarity=0.333 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQ---GFDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~---G~~V~vlE~~~~~ 82 (533)
..+++|||+|..|+-.|..|++. |.+|+|+|+.+++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 46899999999999999999999 9999999988653
No 218
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.69 E-value=0.00034 Score=67.14 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 4689999999999999999999999999999763
No 219
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.68 E-value=2.7e-05 Score=82.05 Aligned_cols=35 Identities=34% Similarity=0.493 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++||+|||||++||+||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45689999999999999999999999999999973
No 220
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.66 E-value=0.00019 Score=72.92 Aligned_cols=35 Identities=31% Similarity=0.529 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 46899999999999999999999999999998754
No 221
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.62 E-value=0.00053 Score=69.83 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
...+|+|||+|..|+-.|..|++.|.+|+|+|+.++
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 347899999999999999999999999999998743
No 222
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.62 E-value=3.5e-05 Score=79.09 Aligned_cols=62 Identities=18% Similarity=0.156 Sum_probs=46.8
Q ss_pred chhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEe-CCeeeecCEEEEccChhhHHHhh
Q 009508 250 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 250 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
...+...+.+.++++|++|+++++|++|..++ +.+ .+.. +++++.+|.||+|+|......++
T Consensus 225 ~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~dG~~i~aD~Vv~a~G~~pn~~l~ 287 (493)
T 1m6i_A 225 PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLKDGRKVETDHIVAAVGLEPNVELA 287 (493)
T ss_dssp CHHHHHHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCCEEECCTTH
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEECCCCEEECCEEEECCCCCccHHHH
Confidence 34566777888889999999999999998764 444 3444 45689999999999976543333
No 223
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.58 E-value=0.00042 Score=70.59 Aligned_cols=35 Identities=34% Similarity=0.576 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 47899999999999999999999999999998743
No 224
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.58 E-value=0.00065 Score=69.63 Aligned_cols=36 Identities=28% Similarity=0.360 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
...+|+|||+|.+|+-.|..|++.|.+|+|+|+.++
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 232 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDT 232 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccc
Confidence 356899999999999999999999999999998743
No 225
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.57 E-value=4.3e-05 Score=79.52 Aligned_cols=56 Identities=16% Similarity=0.180 Sum_probs=43.2
Q ss_pred HhcCCEEEcCceeeEEEeccCCceEEEEEeC---Ce--eeec-CEEEEccChhhHHHhhhhc
Q 009508 262 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSA-GAVVLAVGISTLQELIKNS 317 (533)
Q Consensus 262 ~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~---~~--~~~a-d~VV~a~~~~~~~~ll~~~ 317 (533)
.+.+++|++++.|++|..+++++++++|+.. +. ++.| +.||+|+|.....++|..+
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~S 278 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLS 278 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHc
Confidence 3458999999999999998323778887652 33 5778 5699999999888877665
No 226
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.53 E-value=0.00087 Score=68.39 Aligned_cols=36 Identities=31% Similarity=0.417 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
...+|+|||+|..|+-.|..|++.|.+|+++|+.++
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 214 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 214 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 356899999999999999999999999999998743
No 227
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.53 E-value=0.00088 Score=68.61 Aligned_cols=36 Identities=31% Similarity=0.429 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
...+|+|||+|..|+-.|..|++.|.+|+|+|+.++
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 357899999999999999999999999999998754
No 228
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.53 E-value=2.9e-05 Score=80.40 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=44.4
Q ss_pred HHHHHHhcCCEEEcCceeeEEEeccC-CceEEEEEe---CCe--ee---ecCEEEEccChhhHHHhhhhc
Q 009508 257 WMDSMRTRGCEFLDGRRVTDFIYDEE-RCCISDVVC---GKE--TY---SAGAVVLAVGISTLQELIKNS 317 (533)
Q Consensus 257 l~~~l~~~G~~i~~~~~V~~I~~~~~-~~~v~~v~~---~~~--~~---~ad~VV~a~~~~~~~~ll~~~ 317 (533)
+.+.+++.|++|++++.|++|..+++ ++++++|.. +++ ++ .++.||+|+|.....+|+...
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~S 269 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLS 269 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHT
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHc
Confidence 33334567999999999999998751 137777765 233 34 568999999999887777654
No 229
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.52 E-value=0.0023 Score=64.93 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~--G~~V~vlE~~~~ 81 (533)
..++|+|||+|.+|+-+|..|++. |.+|+++++++.
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 357899999999999999999998 899999998854
No 230
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.50 E-value=0.00045 Score=67.84 Aligned_cols=34 Identities=26% Similarity=0.638 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
.+|+|||+|.+|+-.|..|++.|.+|+|+|+.++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 6899999999999999999999999999998743
No 231
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.49 E-value=0.00092 Score=68.47 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHH----CCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSK----QGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~----~G~~V~vlE~~~~ 81 (533)
..+|+|||||..|+-.|..|++ .|.+|+++++.+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~ 218 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 218 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc
Confidence 4689999999999999999987 4789999997643
No 232
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.48 E-value=6.7e-05 Score=73.80 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=43.1
Q ss_pred cchhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhHHHhh
Q 009508 249 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 314 (533)
Q Consensus 249 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~~~ll 314 (533)
+.+.+.+.+.+.+++.|++|+++++|++|. . .. +..+++++.+|.||+|+|......++
T Consensus 181 ~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~--~~---v~~~~g~i~~D~vi~a~G~~p~~~ll 239 (367)
T 1xhc_A 181 LDEELSNMIKDMLEETGVKFFLNSELLEAN--E--EG---VLTNSGFIEGKVKICAIGIVPNVDLA 239 (367)
T ss_dssp CCHHHHHHHHHHHHHTTEEEECSCCEEEEC--S--SE---EEETTEEEECSCEEEECCEEECCHHH
T ss_pred CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE--e--eE---EEECCCEEEcCEEEECcCCCcCHHHH
Confidence 344667778888899999999999999997 2 21 33443349999999999966443343
No 233
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.44 E-value=0.00057 Score=66.91 Aligned_cols=34 Identities=32% Similarity=0.469 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999999763
No 234
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.36 E-value=0.00016 Score=75.74 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=42.9
Q ss_pred HhcCCEEEcCceeeEEEeccCC--ceEEEEEe---CCe--eeec-CEEEEccChhhHHHhhhhc
Q 009508 262 RTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GKE--TYSA-GAVVLAVGISTLQELIKNS 317 (533)
Q Consensus 262 ~~~G~~i~~~~~V~~I~~~~~~--~~v~~v~~---~~~--~~~a-d~VV~a~~~~~~~~ll~~~ 317 (533)
++.+++|++++.|++|..++++ +++++|.. +++ ++.| +.||+|+|.....+|+...
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~S 305 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYS 305 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHT
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhC
Confidence 4568999999999999987411 46777754 343 5778 8999999998888777665
No 235
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.34 E-value=0.0022 Score=61.82 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 4689999999999999999999999999999763
No 236
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.29 E-value=0.0022 Score=65.50 Aligned_cols=34 Identities=35% Similarity=0.580 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
...+++|||+|..|+-.|..|++.|.+|+++++.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3468999999999999999999999999999974
No 237
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.26 E-value=0.00017 Score=74.82 Aligned_cols=54 Identities=22% Similarity=0.299 Sum_probs=42.2
Q ss_pred hcCCEEEcCceeeEEEeccCCceEEEEEe-C---Ce--eeecC-EEEEccChhhHHHhhhhc
Q 009508 263 TRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAG-AVVLAVGISTLQELIKNS 317 (533)
Q Consensus 263 ~~G~~i~~~~~V~~I~~~~~~~~v~~v~~-~---~~--~~~ad-~VV~a~~~~~~~~ll~~~ 317 (533)
+.|++|++++.|++|..++ ++++++|.. + ++ ++.|+ .||+|+|.....+|+...
T Consensus 221 ~~~~~i~~~~~V~~i~~~~-~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~S 281 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDA-DRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLS 281 (546)
T ss_dssp CTTEEEECSCEEEEEEECT-TSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred CCCcEEEeCCEEEEEEECC-CCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhc
Confidence 4689999999999999874 367777764 2 32 68898 999999998777776554
No 238
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.20 E-value=0.004 Score=63.64 Aligned_cols=34 Identities=32% Similarity=0.485 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
...+++|||+|..|+-.|..|++.|.+|+++++.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 3457999999999999999999999999999975
No 239
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.12 E-value=0.0039 Score=64.48 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..++|+|||+|.+|+-.|..|++.+.+|+|+++.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 457899999999999999999999999999999876
No 240
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.11 E-value=0.0027 Score=61.20 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
...+|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~ 205 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRK 205 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcC
Confidence 3468999999999999999999999999999976
No 241
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.06 E-value=0.0033 Score=60.21 Aligned_cols=33 Identities=30% Similarity=0.376 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+|+|||+|.+|+-.|..|++.|.+|+++++.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~ 187 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYM 187 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcC
Confidence 468999999999999999999999999999976
No 242
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.00 E-value=0.0082 Score=61.77 Aligned_cols=33 Identities=36% Similarity=0.522 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+++|||+|..|+-.|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 457999999999999999999999999999974
No 243
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.76 E-value=0.0097 Score=56.56 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC
Confidence 4689999999999999999999999999999763
No 244
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.56 E-value=0.016 Score=55.23 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 34689999999999999999999999999999763
No 245
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.47 E-value=0.0032 Score=53.23 Aligned_cols=37 Identities=32% Similarity=0.433 Sum_probs=32.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.....+|+|||+|..|...|..|.+.|++|+++++++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3455789999999999999999999999999999874
No 246
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.43 E-value=0.0047 Score=51.14 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=32.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..+.+|+|||.|-.|...|..|.+.|++|+++|+++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 445689999999999999999999999999999873
No 247
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.26 E-value=0.0047 Score=50.91 Aligned_cols=33 Identities=30% Similarity=0.521 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.++|+|||+|..|...|..|.+.|++|+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 468999999999999999999999999999986
No 248
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.17 E-value=0.0045 Score=61.07 Aligned_cols=38 Identities=18% Similarity=0.127 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
.++|+|||+|..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 46899999999999999999999999999999977643
No 249
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.16 E-value=0.0059 Score=61.56 Aligned_cols=39 Identities=36% Similarity=0.492 Sum_probs=35.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
..++|+|||+|.+|+.+|..|++.|.+|+|+|+.+++..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 186 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG 186 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc
Confidence 457999999999999999999999999999999887654
No 250
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.12 E-value=0.0062 Score=50.42 Aligned_cols=34 Identities=29% Similarity=0.506 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+++|+|+|+|-.|...|..|.++|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999863
No 251
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.07 E-value=0.0061 Score=53.06 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQ-GFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~-G~~V~vlE~~~ 80 (533)
...+|+|||+|..|...|..|.+. |++|+++|+++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 356899999999999999999999 99999999873
No 252
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.98 E-value=0.0058 Score=58.27 Aligned_cols=36 Identities=22% Similarity=0.400 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
.++|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 368999999999999999999999999999988653
No 253
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.98 E-value=0.0091 Score=50.20 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.+.+|+|+|+|-.|...|..|.+.|++|+++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3568999999999999999999999999999986
No 254
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.89 E-value=0.0082 Score=47.67 Aligned_cols=33 Identities=36% Similarity=0.455 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G-~~V~vlE~~ 79 (533)
.++|+|+|+|..|...|..|.+.| ++|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 999999986
No 255
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.72 E-value=0.012 Score=55.88 Aligned_cols=34 Identities=29% Similarity=0.505 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|.|||+|..|...|..|+++|++|+++|++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3467999999999999999999999999999986
No 256
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.69 E-value=0.01 Score=59.92 Aligned_cols=58 Identities=24% Similarity=0.326 Sum_probs=42.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|.+|+.+|..|++.|.+|+|+|+.+++....+.. ....+.+.+++.|++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~------~~~~l~~~l~~~Gv~ 224 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLE------VSRAAERVFKKQGLT 224 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHH------HHHHHHHHHHHHTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccCHH------HHHHHHHHHHHCCCE
Confidence 4789999999999999999999999999999987653211110 012234556667776
No 257
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.67 E-value=0.013 Score=57.76 Aligned_cols=38 Identities=24% Similarity=0.481 Sum_probs=34.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
..+++|||+|..|+..|..|++.|.+|+|+|+.+++..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh
Confidence 57899999999999999999999999999999877544
No 258
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.63 E-value=0.052 Score=57.68 Aligned_cols=49 Identities=18% Similarity=0.236 Sum_probs=36.6
Q ss_pred HHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCC--eeeecCEEEEccChhhH
Q 009508 257 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--ETYSAGAVVLAVGISTL 310 (533)
Q Consensus 257 l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~--~~~~ad~VV~a~~~~~~ 310 (533)
+.+.+++.|++++++++|++|..+ +.. +..++ .++.+|.||+|+|....
T Consensus 579 ~~~~l~~~GV~v~~~~~v~~i~~~---~v~--~~~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 579 HRTTLLSRGVKMIPGVSYQKIDDD---GLH--VVINGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHHTTCEEECSCEEEEEETT---EEE--EEETTEEEEECCSEEEECCCEEEC
T ss_pred HHHHHHhcCCEEEeCcEEEEEeCC---eEE--EecCCeEEEEeCCEEEECCCcccc
Confidence 456678889999999999999732 422 22455 47999999999997643
No 259
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.61 E-value=0.011 Score=55.94 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...+|.|||||..|...|..++.+|++|+|+|.++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45689999999999999999999999999999763
No 260
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=95.55 E-value=0.011 Score=47.75 Aligned_cols=112 Identities=10% Similarity=-0.010 Sum_probs=48.9
Q ss_pred eeeecCEEEEccChhhHHHhhhhccccCchhHHhhccCcceeeEEEEEEeccCCCCCCCCceeeccCCCccceeeecccc
Q 009508 294 ETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKI 373 (533)
Q Consensus 294 ~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (533)
++++||+||+|+|+..+..+..+++++ ....+.++.+.+....|+.+.|++++|..... .+ +.+ .
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP-~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~---~g----------d~s-~ 68 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFS-YKKRRAVIETHYDQATKVLLEFSRRWWEFTEA---DW----------KRE-L 68 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEESSCGGGCCHH---HH----------HHH-H
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCC-HHHHHHHHhCCCcceeEEEEEECCCCCCCCCc---cc----------ccc-C
Confidence 478999999999999988654443332 23345688999999999999999999854321 11 000 0
Q ss_pred ccccCCCCCeEEEEEecC--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCCccc
Q 009508 374 YDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 424 (533)
Q Consensus 374 ~~~~~~~~~~v~~~~~~~--~~~~~~~~~~ei~~~~~~~l~~~~p~~~~~~v~ 424 (533)
.+ +..+.++...-++ +..+..+++ +-.+.++..|..++|++.+.+++
T Consensus 69 ~~---~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~~~~~~ 117 (130)
T 2e1m_B 69 DA---IAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVDESRIG 117 (130)
T ss_dssp HH---HSTTHHHHHHHHCCCSCCCC----------------------------
T ss_pred CC---CCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCcHHHHH
Confidence 00 0112111111012 234455543 66778889999999976533443
No 261
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.46 E-value=0.014 Score=58.89 Aligned_cols=36 Identities=39% Similarity=0.404 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...++|.|||.|.+|+++|..|.++|++|++.|.++
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 345789999999999999999999999999999864
No 262
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.40 E-value=0.017 Score=58.32 Aligned_cols=58 Identities=14% Similarity=0.241 Sum_probs=43.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|.+|+-.|..|++.|.+|+|+|+.+++...++... ...+.+.+++.|++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~------~~~l~~~l~~~Gv~ 224 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMI------SETLVEVMNAEGPQ 224 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH------HHHHHHHHHHHSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhhhhHHH------HHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999877543222110 12244566677776
No 263
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.39 E-value=0.026 Score=56.38 Aligned_cols=40 Identities=15% Similarity=0.312 Sum_probs=34.8
Q ss_pred CCCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 41 NNNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 41 ~~~~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+..+...++|.|||+|..|...|..|+++|++|+++|+++
T Consensus 48 ~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 48 NSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp SCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 3444455789999999999999999999999999999874
No 264
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.38 E-value=0.013 Score=55.63 Aligned_cols=35 Identities=37% Similarity=0.537 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
.++|+|||+|..|+-+|..|++.|.+|+|+|+.+.
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 46899999999999999999999999999997643
No 265
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.33 E-value=0.016 Score=47.74 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+|+|+|+|..|...|..|.+.|++|++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999976
No 266
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.21 E-value=0.021 Score=58.29 Aligned_cols=39 Identities=26% Similarity=0.496 Sum_probs=35.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
...+|+|||+|..|+-.|..|++.|.+|+|+|+.+++-.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 457899999999999999999999999999999877543
No 267
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.15 E-value=0.02 Score=55.55 Aligned_cols=38 Identities=24% Similarity=0.271 Sum_probs=32.5
Q ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 42 NNGKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 42 ~~~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++++.+++|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 24 ~m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 24 AMEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp ---CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred cccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34445679999999999999999999999999999986
No 268
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.14 E-value=0.022 Score=57.61 Aligned_cols=58 Identities=22% Similarity=0.310 Sum_probs=43.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|.+|+-+|..|++.|.+|+|+|+.+++...++... ...+.+.+++.|++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~------~~~l~~~l~~~gv~ 223 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLL------SATLAENMHAQGIE 223 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH------HHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccccCHHH------HHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999876543222110 12234556677776
No 269
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.09 E-value=0.024 Score=54.37 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=32.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 80 (533)
.++++|+|||||-.|.+.|..|++.|+ +|+++|.+.
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 344689999999999999999999998 999999873
No 270
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.04 E-value=0.023 Score=54.36 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|+++|++|+++.++
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 368999999999999999999999999999986
No 271
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.96 E-value=0.031 Score=55.95 Aligned_cols=38 Identities=32% Similarity=0.516 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~ 186 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE 186 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 56899999999999999999999999999999876543
No 272
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.94 E-value=0.018 Score=58.56 Aligned_cols=59 Identities=20% Similarity=0.338 Sum_probs=43.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..++|+|||+|.+|+-+|..|++.|.+|+|+|+.+.+...++.. ....+.+.+++.|++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~------~~~~l~~~l~~~Gv~ 243 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGD------MAEYIYKEADKHHIE 243 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSSCHH------HHHHHHHHHHHTTCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcCCHH------HHHHHHHHHHHcCcE
Confidence 45789999999999999999999999999999987664421110 012234556667776
No 273
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.91 E-value=0.029 Score=53.20 Aligned_cols=37 Identities=30% Similarity=0.516 Sum_probs=32.9
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 43 NGKNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 43 ~~~~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
|.+...+|.|||+|..|.+.|+.|+++|+ +|+++|..
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34455789999999999999999999999 99999986
No 274
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.90 E-value=0.029 Score=55.71 Aligned_cols=37 Identities=30% Similarity=0.560 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~G 83 (533)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++-
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 179 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL 179 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 5789999999999999999999999999999987653
No 275
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.88 E-value=0.03 Score=52.51 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.++|.|||+|..|...|..|+++|++|+++|++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999987
No 276
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.81 E-value=0.028 Score=53.57 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..++|.|||+|..|...|..|+++|++|+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999873
No 277
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.79 E-value=0.023 Score=50.87 Aligned_cols=33 Identities=12% Similarity=0.349 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
++|+|||+|-.|...|..|.++|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999874
No 278
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.78 E-value=0.021 Score=57.30 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
.++|.|||.|.+|+++|..|+++|++|++.|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 468999999999999999999999999999987654
No 279
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.71 E-value=0.03 Score=54.50 Aligned_cols=35 Identities=34% Similarity=0.563 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
.++|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 45899999999999999999999999999998754
No 280
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.70 E-value=0.025 Score=53.88 Aligned_cols=32 Identities=34% Similarity=0.410 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++|.|||+|..|.+.|..|+++|++|+++.++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 68999999999999999999999999999986
No 281
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.67 E-value=0.037 Score=55.71 Aligned_cols=38 Identities=26% Similarity=0.525 Sum_probs=34.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
..+|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 185 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR 185 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 46899999999999999999999999999999887654
No 282
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.59 E-value=0.03 Score=56.10 Aligned_cols=58 Identities=22% Similarity=0.372 Sum_probs=44.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+++|||||..|+-.|..|++.|.+|+|+|+.+++...++.- ....+.+.+++.|++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~------~~~~~~~~l~~~gV~ 204 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDAD------MNQPILDELDKREIP 204 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGG------GGHHHHHHHHHTTCC
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccch------hHHHHHHHhhccceE
Confidence 4589999999999999999999999999999998765422211 122355667777877
No 283
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.58 E-value=0.036 Score=52.53 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||+|.+|+-.|..|++.|.+|+++++++.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 47899999999999999999999999999998754
No 284
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.52 E-value=0.033 Score=56.93 Aligned_cols=58 Identities=24% Similarity=0.323 Sum_probs=43.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.+++...++... ...+.+.+++.|++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~------~~~l~~~l~~~gv~ 233 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESV------INVLENDMKKNNIN 233 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTSCHHH------HHHHHHHHHHTTCE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcccchhh------HHHHHHHHHhCCCE
Confidence 56899999999999999999999999999999877643222110 12244566677776
No 285
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.51 E-value=0.037 Score=52.85 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
++++|+|||+|..|...|..|+++|+ +|++++++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999999 99999986
No 286
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.48 E-value=0.037 Score=53.27 Aligned_cols=33 Identities=30% Similarity=0.420 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.++|.|||+|..|...|..|+++|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 468999999999999999999999999999974
No 287
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.44 E-value=0.033 Score=57.48 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..++|+|||+|.+|+-.|..|++.|.+|+|+++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457999999999999999999999999999999876
No 288
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.44 E-value=0.038 Score=52.54 Aligned_cols=33 Identities=33% Similarity=0.431 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|+++|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 358999999999999999999999999999976
No 289
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.39 E-value=0.042 Score=55.58 Aligned_cols=57 Identities=25% Similarity=0.304 Sum_probs=42.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|..|+-.|..|++.|.+|+++|+.+++-. ++.. ....+.+.+++.|++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~------~~~~l~~~l~~~Gv~ 232 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-EDPA------IGEAVTAAFRAEGIE 232 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SCHH------HHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CCHH------HHHHHHHHHHhCCCE
Confidence 46899999999999999999999999999999876532 1110 012244556667776
No 290
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.37 E-value=0.043 Score=54.39 Aligned_cols=37 Identities=24% Similarity=0.351 Sum_probs=33.2
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...+.+|.|||.|..||..|..|+++|++|+.+|-+.
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3456799999999999999999999999999999764
No 291
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.33 E-value=0.041 Score=55.13 Aligned_cols=33 Identities=33% Similarity=0.550 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
++|.|||+|..|+..|..|+++|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 689999999999999999999999999999874
No 292
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.31 E-value=0.041 Score=55.61 Aligned_cols=35 Identities=31% Similarity=0.478 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..++|.|||+|..|+..|..|+++|++|++++++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35799999999999999999999999999999863
No 293
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.30 E-value=0.049 Score=52.15 Aligned_cols=35 Identities=31% Similarity=0.427 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 80 (533)
++++|+|||||..|.+.|..|+++|+ +|+++|.+.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 34689999999999999999999999 999999874
No 294
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.28 E-value=0.027 Score=53.64 Aligned_cols=36 Identities=25% Similarity=0.283 Sum_probs=30.5
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHC-----C-CeEEEEcC
Q 009508 43 NGKNKKKIVVVGSGWAGLGAAHHLSKQ-----G-FDVTVLDD 78 (533)
Q Consensus 43 ~~~~~~dVvVIGaG~aGL~aA~~L~~~-----G-~~V~vlE~ 78 (533)
++.++++|.|||+|..|...|..|+++ | ++|+++++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 344556899999999999999999999 9 99999986
No 295
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.28 E-value=0.039 Score=52.23 Aligned_cols=35 Identities=31% Similarity=0.384 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 46899999999999999999999999999998754
No 296
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.28 E-value=0.041 Score=49.16 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=32.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
-..++|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 35679999999999999999999999999999865
No 297
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.21 E-value=0.056 Score=47.99 Aligned_cols=36 Identities=22% Similarity=0.396 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..++|.|||+|..|.+.|..|+++|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456899999999999999999999999999998754
No 298
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.21 E-value=0.031 Score=52.70 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|+++|++|++++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 368999999999999999999999999999987
No 299
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.20 E-value=0.054 Score=53.65 Aligned_cols=38 Identities=32% Similarity=0.531 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
..+|+|||+|..|+-+|..|.+.|.+|+++|+.+++..
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~ 179 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA 179 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh
Confidence 46899999999999999999999999999999877643
No 300
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.18 E-value=0.054 Score=51.57 Aligned_cols=37 Identities=30% Similarity=0.437 Sum_probs=32.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 80 (533)
+++.++|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3456799999999999999999999998 999999864
No 301
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.17 E-value=0.043 Score=55.28 Aligned_cols=58 Identities=22% Similarity=0.329 Sum_probs=42.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-CcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP-DDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~-~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.+++-.+ ++... ...+.+.+++.|++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~------~~~l~~~l~~~Gv~ 207 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEF------TDILAKDYEAHGVN 207 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHH------HHHHHHHHHHTTCE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhH------HHHHHHHHHHCCCE
Confidence 468999999999999999999999999999998765431 11110 12244566677776
No 302
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.17 E-value=0.04 Score=55.82 Aligned_cols=35 Identities=29% Similarity=0.474 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~--G~~V~vlE~~~ 80 (533)
+.++|.|||+|..|+..|..|+++ |++|++++++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 456899999999999999999998 79999999763
No 303
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.13 E-value=0.046 Score=56.52 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..++|+|||+|.+|+-+|..|++.|.+|+|+++++.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457899999999999999999999999999999875
No 304
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.12 E-value=0.058 Score=53.61 Aligned_cols=38 Identities=39% Similarity=0.536 Sum_probs=34.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh
Confidence 56899999999999999999999999999999877643
No 305
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.09 E-value=0.057 Score=51.30 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..+++|.|||.|..|...|..|++.|++|++++++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 345789999999999999999999999999999873
No 306
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.09 E-value=0.043 Score=55.45 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~G 83 (533)
..++|+|||+|.+|+-.|..|++.|.+|+|+++++.+-
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 35789999999999999999999999999999886653
No 307
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.07 E-value=0.062 Score=51.18 Aligned_cols=35 Identities=37% Similarity=0.482 Sum_probs=31.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+..++|.|||+|..|...|..|++.|++|++++++
T Consensus 28 ~~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 28 PTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 34578999999999999999999999999999976
No 308
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.02 E-value=0.052 Score=54.58 Aligned_cols=36 Identities=31% Similarity=0.413 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CC-eEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQ-GF-DVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~-G~-~V~vlE~~~~ 81 (533)
..++|.|||+|..|+..|..|+++ |+ +|++++++..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999999865
No 309
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.02 E-value=0.046 Score=52.33 Aligned_cols=36 Identities=25% Similarity=0.456 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
...+|+|||+|.+|+-.|..|++.|.+|+++++++.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 346899999999999999999999999999998754
No 310
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.02 E-value=0.023 Score=57.26 Aligned_cols=35 Identities=31% Similarity=0.521 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+.|+|+|+|+|-.|...|..|.+.|++|+|+|+++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 56799999999999999999999999999999874
No 311
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.01 E-value=0.059 Score=50.54 Aligned_cols=33 Identities=33% Similarity=0.247 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
++|.|||+|..|...|..|+++|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 369999999999999999999999999999874
No 312
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.99 E-value=0.034 Score=51.40 Aligned_cols=34 Identities=26% Similarity=0.486 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+.|+|||+|-.|+..|..|.+.|.+|+|++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4578999999999999999999999999999975
No 313
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.95 E-value=0.057 Score=50.59 Aligned_cols=34 Identities=26% Similarity=0.473 Sum_probs=30.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.+++|.|||+|..|...|..|+ +|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4679999999999999999999 999999999873
No 314
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=93.95 E-value=0.065 Score=54.19 Aligned_cols=37 Identities=19% Similarity=0.390 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
...+|+|||+|..|+-.|..|++.|.+|+++++.+++
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 3478999999999999999999999999999998654
No 315
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.92 E-value=0.056 Score=51.27 Aligned_cols=32 Identities=41% Similarity=0.399 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|+ +|++|+++.++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 468999999999999999999 99999999986
No 316
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.89 E-value=0.065 Score=52.32 Aligned_cols=35 Identities=34% Similarity=0.377 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...+|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45689999999999999999999999999999873
No 317
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.89 E-value=0.055 Score=56.23 Aligned_cols=58 Identities=24% Similarity=0.381 Sum_probs=42.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|.+|+-+|..|++.|.+|+++|+.+++...++... ...+.+.+++.|++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~------~~~l~~~l~~~GV~ 208 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREM------AGFAHQAIRDQGVD 208 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHH------HHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHH------HHHHHHHHHHCCCE
Confidence 46899999999999999999999999999999876533211110 11234556666776
No 318
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.88 E-value=0.06 Score=54.65 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=43.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|..|+-.|..|++.|.+|+++++.+++...++... ...+.+.+++.|++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~------~~~~~~~l~~~gv~ 244 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI------STNCTEELENAGVE 244 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHH------HHHHHHHHHHTTCE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccccCHHH------HHHHHHHHHHCCCE
Confidence 47899999999999999999999999999999877543222110 12234556667776
No 319
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.87 E-value=0.052 Score=52.11 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||+|.+|+-.|..|++.|.+|+++++++.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 47899999999999999999999999999998754
No 320
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.86 E-value=0.059 Score=52.30 Aligned_cols=33 Identities=30% Similarity=0.303 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|++.|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 368999999999999999999999999999976
No 321
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.86 E-value=0.071 Score=53.72 Aligned_cols=35 Identities=23% Similarity=0.380 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..++|.|||+|..|...|..|+++|++|+++|++.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34689999999999999999999999999999863
No 322
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.81 E-value=0.064 Score=50.73 Aligned_cols=34 Identities=26% Similarity=0.335 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++++|.|||.|..|...|..|+++|++|++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 4568999999999999999999999999999986
No 323
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.79 E-value=0.055 Score=51.65 Aligned_cols=35 Identities=34% Similarity=0.447 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 46899999999999999999999999999998754
No 324
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.76 E-value=0.06 Score=51.51 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHH-HHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLG-AAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~-aA~~L~~~G~~V~vlE~~~ 80 (533)
.++|.|||.|-+|++ +|..|.++|++|++.|+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468999999999997 7888999999999999874
No 325
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.73 E-value=0.09 Score=49.79 Aligned_cols=34 Identities=29% Similarity=0.314 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|.|||.|..|...|..|++.|++|++++++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999999999999999999999999976
No 326
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.71 E-value=0.058 Score=50.90 Aligned_cols=37 Identities=32% Similarity=0.511 Sum_probs=30.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGN 80 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~~ 80 (533)
....++|+|||||..|...|+.|+.+|. +|+|+|.+.
T Consensus 11 ~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 11 NKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3345789999999999999999999998 999999874
No 327
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.69 E-value=0.052 Score=52.57 Aligned_cols=34 Identities=29% Similarity=0.321 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
...+|+|||+|..|+.+|..|...|.+|+++|++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4568999999999999999999999999999987
No 328
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.66 E-value=0.087 Score=50.05 Aligned_cols=36 Identities=25% Similarity=0.461 Sum_probs=32.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
+...++|.|||.|..|.+.|..|.+.|+ +|++++++
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 3445789999999999999999999999 99999986
No 329
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.65 E-value=0.068 Score=54.02 Aligned_cols=35 Identities=31% Similarity=0.478 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..++|.|||+|..|...|..|+++|++|+++|++.
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999999874
No 330
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.64 E-value=0.071 Score=53.68 Aligned_cols=38 Identities=24% Similarity=0.333 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGS 84 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 84 (533)
..+++|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 184 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP 184 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc
Confidence 46899999999999999999999999999999877643
No 331
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.60 E-value=0.068 Score=50.94 Aligned_cols=34 Identities=35% Similarity=0.528 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 80 (533)
.++|+|||+|..|...|..|+++|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3689999999999999999999998 999999863
No 332
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.56 E-value=0.059 Score=54.17 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCe-EEEEcCCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFD-VTVLDDGNGF 82 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~-V~vlE~~~~~ 82 (533)
..++|+|||+|.+|+-.|..|++.|.+ |+|+++++..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 357899999999999999999999999 9999998654
No 333
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.46 E-value=0.075 Score=50.66 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=29.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.+++|.|||+|..|...|..|+++|++|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4568999999999999999999999999999 65
No 334
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.40 E-value=0.08 Score=50.07 Aligned_cols=32 Identities=34% Similarity=0.552 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
++|+|||+|..|.+.|+.|+.+|+ +|+++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 479999999999999999999999 99999986
No 335
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.39 E-value=0.095 Score=49.95 Aligned_cols=34 Identities=38% Similarity=0.473 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 80 (533)
.++|+|||||-.|.+.|..|+.+|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3589999999999999999999998 999999763
No 336
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.37 E-value=0.082 Score=47.16 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=30.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|.|||+|..|...|..|.+.|++|.+++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4468999999999999999999999999999976
No 337
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.33 E-value=0.083 Score=54.28 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=42.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
.+++|||+|..|+-.|..|++.|.+|+++|+.+++...++... ...+.+.+++.|++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~------~~~l~~~l~~~GV~ 271 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNET------RAYVLDRMKEQGME 271 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCCSHHH------HHHHHHHHHHTTCE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccccHHH------HHHHHHHHHhCCcE
Confidence 7899999999999999999999999999999876543211110 12244556677776
No 338
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.33 E-value=0.08 Score=54.44 Aligned_cols=58 Identities=24% Similarity=0.315 Sum_probs=42.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
.+.+++|||||..|+-.|..+++.|.+|+|++++..+.+ +|.-. ...+.+.+++.|+.
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~-~D~ei------~~~l~~~l~~~gi~ 279 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG-FDQQC------AVKVKLYMEEQGVM 279 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT-SCHHH------HHHHHHHHHHTTCE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc-cchhH------HHHHHHHHHhhcce
Confidence 457899999999999999999999999999998655432 11110 12244566666776
No 339
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.28 E-value=0.09 Score=50.02 Aligned_cols=35 Identities=20% Similarity=0.488 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~~ 80 (533)
++++|+|||+|-.|.+.|+.|+.+|. +|+++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 45799999999999999999999987 999999763
No 340
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.18 E-value=0.082 Score=52.33 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=31.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...++|.|||+|..|+..|..|++ |++|+++++++
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 345689999999999999999998 99999999874
No 341
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.17 E-value=0.073 Score=50.56 Aligned_cols=34 Identities=29% Similarity=0.360 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..++|.|||.|..|...|..|+++|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 45789999999999999999999999 99999986
No 342
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.16 E-value=0.088 Score=50.23 Aligned_cols=34 Identities=29% Similarity=0.534 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|.|||.|..|...|..|++.|++|++++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4578999999999999999999999999999986
No 343
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.16 E-value=0.092 Score=50.01 Aligned_cols=35 Identities=31% Similarity=0.602 Sum_probs=31.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
+..++|+|||+|..|.+.|+.|++.|. +|+++|..
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 345689999999999999999999987 89999975
No 344
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.13 E-value=0.094 Score=50.65 Aligned_cols=37 Identities=38% Similarity=0.460 Sum_probs=33.2
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 80 (533)
.-...+|||+|||.+|+.+|..|...|. +|+++|+..
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4456799999999999999999999998 999999873
No 345
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.12 E-value=0.11 Score=49.34 Aligned_cols=36 Identities=33% Similarity=0.409 Sum_probs=32.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 80 (533)
+..++|+|||+|..|.+.|+.|++.|. +|+++|...
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 345789999999999999999999988 999999864
No 346
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.09 E-value=0.097 Score=54.66 Aligned_cols=58 Identities=21% Similarity=0.429 Sum_probs=43.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|.+|+-.|..|++.|.+|+++|+.+++...++... ...+.+.+++.|++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~------~~~l~~~l~~~GV~ 244 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEM------AAYVHEHMKNHDVE 244 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHH------HHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHH------HHHHHHHHHHcCCE
Confidence 46899999999999999999999999999999876644221110 12244566667776
No 347
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.03 E-value=0.085 Score=55.23 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 458999999999999999999999999999986
No 348
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.02 E-value=0.12 Score=52.05 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~~ 81 (533)
..++|+|||||.+|+-+|..+.+.|. +|+++++++.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 45789999999999999999999997 5999998754
No 349
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.01 E-value=0.11 Score=49.32 Aligned_cols=32 Identities=38% Similarity=0.665 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
++|+|||||-.|...|+.|+..|+ +|.++|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 589999999999999999999997 99999976
No 350
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.01 E-value=0.078 Score=53.03 Aligned_cols=33 Identities=30% Similarity=0.466 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
++|.|||+|..|+..|..|+++|++|++++++.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999999863
No 351
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.96 E-value=0.068 Score=50.38 Aligned_cols=34 Identities=26% Similarity=0.190 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+++|.|||.|..|...|..|+++|++|+++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999874
No 352
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.90 E-value=0.1 Score=50.40 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=32.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
.-...+|+|+|||.+|..+|..|...|. +|+++|+.
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4456799999999999999999999998 89999987
No 353
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.88 E-value=0.08 Score=54.35 Aligned_cols=35 Identities=31% Similarity=0.384 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 46899999999999999999999999999998754
No 354
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.87 E-value=0.064 Score=48.07 Aligned_cols=34 Identities=15% Similarity=0.305 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEE-EcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTV-LDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~v-lE~~ 79 (533)
++++|.|||+|..|...|..|+++|++|++ ++++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 356899999999999999999999999999 7776
No 355
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.86 E-value=0.04 Score=49.48 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=31.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+..++|.|||+|..|.+.|..|+++|++|+++++.
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 34568999999999999999999999999999875
No 356
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.86 E-value=0.11 Score=51.71 Aligned_cols=35 Identities=26% Similarity=0.535 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..++.|||.|..|+..|..|+++|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998854
No 357
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.85 E-value=0.11 Score=47.26 Aligned_cols=36 Identities=31% Similarity=0.355 Sum_probs=31.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...++|.|||+|..|...|..|+++|++|++++++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 456789999999999999999999999999999863
No 358
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.84 E-value=0.1 Score=53.20 Aligned_cols=58 Identities=22% Similarity=0.289 Sum_probs=43.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+++|||+|..|+-.|..|++.|.+|+++|+.+++...++... ...+.+.+++.|++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~------~~~l~~~l~~~GV~ 239 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADA------ALVLEESFAERGVR 239 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCSSHHH------HHHHHHHHHHTTCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHH------HHHHHHHHHHCCCE
Confidence 47899999999999999999999999999999877643222110 12344566777876
No 359
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.82 E-value=0.1 Score=51.64 Aligned_cols=64 Identities=19% Similarity=0.311 Sum_probs=42.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCC-CcccccccccCCCcHHHHHHHhCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSP-DDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~-~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
.+.+|+|||.|-.|...|..|.+.|++|+++|.++..--. -+.|...+.++... .+.++..|+.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~-~~~L~~agi~ 67 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATR-MDLLESAGAA 67 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTC-HHHHHHTTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCC-HHHHHhcCCC
Confidence 3468999999999999999999999999999987431000 01233334443333 2345566665
No 360
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.82 E-value=0.11 Score=49.91 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+.++|.|||+|..|...|..|+++|++|++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4578999999999999999999999999999976
No 361
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.80 E-value=0.11 Score=48.69 Aligned_cols=33 Identities=30% Similarity=0.453 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999873
No 362
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.62 E-value=0.12 Score=48.91 Aligned_cols=33 Identities=30% Similarity=0.463 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~--G~~V~vlE~~~ 80 (533)
++|+|||+|..|.+.|..|+++ |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999986 78999999873
No 363
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.59 E-value=0.13 Score=47.99 Aligned_cols=34 Identities=38% Similarity=0.515 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+++|+|.|+|..|...+..|.++|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999999999999999999999998864
No 364
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=92.59 E-value=1.3 Score=43.04 Aligned_cols=47 Identities=17% Similarity=0.104 Sum_probs=37.8
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeEEEeccCCceEEEEEeCCeeeecCEEEEccChhhH
Q 009508 251 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 310 (533)
Q Consensus 251 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~~~v~~v~~~~~~~~ad~VV~a~~~~~~ 310 (533)
..+.+.|.+.+++.|++|+++++|++|+.. .++++|.||.|.|....
T Consensus 98 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 98 RGLVHALRDKCRSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCCCch
Confidence 356777888888889999999999987532 13689999999998866
No 365
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.58 E-value=0.12 Score=52.19 Aligned_cols=58 Identities=24% Similarity=0.288 Sum_probs=42.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCeEEEEcCCCCCCC-CCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQ-GFDVTVLDDGNGFGS-PDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~GG-~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+|+|||+|.+|+-.|..|++. |.+|+++|+.+++.. .++.. ....+.+.+++.|++
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~------~~~~l~~~l~~~GV~ 218 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKS------LSQMLRHDLEKNDVV 218 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHH------HHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHH------HHHHHHHHHHhcCCE
Confidence 57899999999999999999999 999999999876543 11111 012244556667776
No 366
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.57 E-value=0.15 Score=47.67 Aligned_cols=33 Identities=12% Similarity=0.356 Sum_probs=30.9
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+ |..|...|..|.++|++|++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 468999999 999999999999999999999976
No 367
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.45 E-value=0.082 Score=51.53 Aligned_cols=31 Identities=42% Similarity=0.370 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 49 dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+|.|||+|..|...|..|+++|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999976
No 368
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.38 E-value=0.14 Score=49.54 Aligned_cols=34 Identities=26% Similarity=0.402 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|.|||.|..|...|..|+++|++|++++++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3478999999999999999999999999999986
No 369
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.28 E-value=0.18 Score=47.88 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
...+|.|||+|..|.+.|+.|+.+|. +|+++|..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 45789999999999999999999997 89999975
No 370
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.25 E-value=0.15 Score=54.34 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.++|.|||+|..|...|..|+++|++|+++|+++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999999873
No 371
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.23 E-value=0.057 Score=44.64 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.++|+|||+|..|...|..|.+.|++|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 568999999999999999999999999999986
No 372
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.19 E-value=0.15 Score=50.27 Aligned_cols=33 Identities=33% Similarity=0.463 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+|+|||+|.+|+.+|..|...|.+|+++|++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 468999999999999999999999999999986
No 373
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.15 E-value=0.13 Score=48.56 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|++.|++|++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 468999999999999999999999999999976
No 374
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.13 E-value=0.13 Score=46.94 Aligned_cols=33 Identities=30% Similarity=0.536 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..+|+|||+|-.|..+|..|++.|. +++|+|.+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 4689999999999999999999997 89999976
No 375
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.10 E-value=0.17 Score=51.02 Aligned_cols=59 Identities=24% Similarity=0.372 Sum_probs=43.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
...+++|||+|..|+-.|..|++.|.+|+++++.+++...++... ...+.+.+++.|++
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~~~~------~~~l~~~l~~~Gv~ 227 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDM------RRGLHAAMEEKGIR 227 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH------HHHHHHHHHHTTCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccCHHH------HHHHHHHHHHCCCE
Confidence 357899999999999999999999999999999876533222110 12234556677776
No 376
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.10 E-value=0.15 Score=48.55 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=30.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
+++++|+|||+|-.|.+.|+.|+.+|. +|.++|.+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 345799999999999999999999885 89999965
No 377
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.06 E-value=0.12 Score=49.55 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=29.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD 78 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~ 78 (533)
++|.|||+|..|...|..|+++|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999997
No 378
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.02 E-value=0.16 Score=51.52 Aligned_cols=58 Identities=26% Similarity=0.342 Sum_probs=43.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCcccccccccCCCcHHHHHHHhCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGFGSPDDISMQGFWYPFRNIFSLVDELGIK 110 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG~~~~G~~~~~~~~~~~~~~~~~lg~~ 110 (533)
..+++|||+|..|+-.|..|++.|.+|+++++.+++...++... ...+.+.+++.|++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~~~------~~~l~~~l~~~Gv~ 248 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDL------RQLLNDAMVAKGIS 248 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHH------HHHHHHHHHHHTCE
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCHHH------HHHHHHHHHHCCCE
Confidence 56899999999999999999999999999999876543222110 12244556667776
No 379
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.00 E-value=0.11 Score=48.79 Aligned_cols=33 Identities=33% Similarity=0.437 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
++|.|||.|..|...|..|+++|++|+++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999999873
No 380
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.99 E-value=0.17 Score=48.05 Aligned_cols=34 Identities=26% Similarity=0.631 Sum_probs=30.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
+.++|+|||+|..|.+.|+.|+.+|. +|.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45689999999999999999998875 89999976
No 381
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.90 E-value=0.22 Score=47.44 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=31.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
+...++|+|||+|..|.+.|+.|+.+|. +++|+|..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 3456799999999999999999999987 89999975
No 382
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.90 E-value=0.12 Score=51.12 Aligned_cols=32 Identities=41% Similarity=0.465 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
++|.|||+|..|+..|..|++ |++|++++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999863
No 383
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.89 E-value=0.18 Score=49.37 Aligned_cols=35 Identities=29% Similarity=0.333 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...+|+|||+|.+|+.+|..+...|.+|++++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999874
No 384
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.89 E-value=0.21 Score=46.31 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+.|+|+|+|-.|..+|..|++.|.+|+|+.++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3468999999999999999999999999999876
No 385
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.83 E-value=0.16 Score=45.00 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=29.6
Q ss_pred CcEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 48 KKIVVVG-SGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIG-aG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++|.||| +|..|...|..|.++|++|.+++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3699999 9999999999999999999999876
No 386
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.76 E-value=0.22 Score=46.84 Aligned_cols=43 Identities=21% Similarity=0.166 Sum_probs=33.9
Q ss_pred ccccCCCCCCCCcEEEECCC---HHHHHHHHHHHHCCCeEEEEcCC
Q 009508 37 RNSTNNNGKNKKKIVVVGSG---WAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 37 ~~~~~~~~~~~~dVvVIGaG---~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.++..++....+.|+|.||+ -.|...|..|+++|.+|+++.++
T Consensus 20 ~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 20 GSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp -CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 34444444556789999985 78999999999999999999876
No 387
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.75 E-value=0.17 Score=48.32 Aligned_cols=35 Identities=11% Similarity=0.234 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC----CeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQG----FDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G----~~V~vlE~~~ 80 (533)
++++|.|||+|..|...|..|.++| ++|++++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3468999999999999999999999 8999998763
No 388
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.72 E-value=0.13 Score=47.88 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+++|+|+|||..|...+..|.++|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999998863
No 389
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.70 E-value=0.18 Score=48.98 Aligned_cols=35 Identities=31% Similarity=0.430 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
+++|+|||||..|..+|+.+++.|++|+++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 46899999999999999999999999999998754
No 390
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.66 E-value=0.19 Score=48.80 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..+|+|+|+|.+|+.+|..|...|.+|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999863
No 391
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.65 E-value=0.16 Score=48.36 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G-~~V~vlE~~~ 80 (533)
.++|.|||.|..|...|..|+++| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999873
No 392
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.63 E-value=0.15 Score=48.50 Aligned_cols=32 Identities=34% Similarity=0.542 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
++|+|||+|..|.+.|..|+++|+ +|+++|++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 479999999999999999999999 99999976
No 393
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.56 E-value=0.18 Score=46.31 Aligned_cols=35 Identities=17% Similarity=0.219 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC----CeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQG----FDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G----~~V~vlE~~~~ 81 (533)
+++|.|||+|..|...|..|+++| ++|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 468999999999999999999999 79999998753
No 394
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.55 E-value=0.18 Score=50.69 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHH--------------------HCCC-eEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLS--------------------KQGF-DVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~--------------------~~G~-~V~vlE~~~~ 81 (533)
...+|+|||+|..|+-+|..|+ +.|. +|+|+++.+.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 3578999999999999999999 5687 7999998754
No 395
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.47 E-value=0.17 Score=48.01 Aligned_cols=32 Identities=38% Similarity=0.535 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQG--FDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G--~~V~vlE~~ 79 (533)
++|+|||+|..|.+.|..|+++| .+|++++++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 57999999999999999999999 799999986
No 396
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.44 E-value=0.2 Score=50.42 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.+++|.|||.|..|...|..|+++|++|++++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999875
No 397
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.42 E-value=0.11 Score=50.30 Aligned_cols=35 Identities=29% Similarity=0.260 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-------CeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQG-------FDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G-------~~V~vlE~~~~ 81 (533)
+++|.|||+|..|.+.|..|+++| ++|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 468999999999999999999999 99999998743
No 398
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.41 E-value=0.24 Score=45.61 Aligned_cols=33 Identities=30% Similarity=0.514 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.++++|||+|-+|-++|+.|++.|.+|+|+.|+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999887
No 399
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.38 E-value=0.25 Score=46.45 Aligned_cols=34 Identities=35% Similarity=0.497 Sum_probs=31.0
Q ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVG-SGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIG-aG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.++|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35799999 99999999999999999999999764
No 400
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.33 E-value=0.18 Score=47.30 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
++|+|||+|..|.+.|+.|++.|+ +|+++|..
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 479999999999999999999998 99999976
No 401
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=91.22 E-value=0.26 Score=52.35 Aligned_cols=37 Identities=22% Similarity=0.378 Sum_probs=33.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 44 GKNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 44 ~~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...-.+|.|||||..|...|+.++.+|++|+++|.++
T Consensus 313 ~~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cccccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 3445789999999999999999999999999999764
No 402
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.22 E-value=0.22 Score=48.48 Aligned_cols=35 Identities=31% Similarity=0.435 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
....|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999999763
No 403
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.20 E-value=0.18 Score=50.96 Aligned_cols=35 Identities=26% Similarity=0.472 Sum_probs=31.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+.+++|.|||+|..|...|..|+++|++|++++++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 45678999999999999999999999999999986
No 404
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=91.19 E-value=0.19 Score=47.50 Aligned_cols=33 Identities=27% Similarity=0.487 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~~ 80 (533)
++|+|||+|..|.+.|+.|+++|. +++++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999887 999999864
No 405
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.19 E-value=0.17 Score=48.22 Aligned_cols=36 Identities=17% Similarity=0.367 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~ 189 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF 189 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC
Confidence 468999999999999999999999999999987543
No 406
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.15 E-value=0.22 Score=44.89 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=31.1
Q ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.+.+.|+|.|| |..|...|..|.++|++|+++.++
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 34578999998 999999999999999999999986
No 407
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.14 E-value=0.19 Score=47.28 Aligned_cols=32 Identities=28% Similarity=0.454 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++|.|||+|..|...|..|.+.|++|.+++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999976
No 408
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.11 E-value=0.23 Score=46.13 Aligned_cols=32 Identities=31% Similarity=0.371 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++|.|||+|..|...|..|.+.|++|++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999876
No 409
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.10 E-value=0.26 Score=47.21 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=30.2
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 46 NKKKIVVVGS-GWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGa-G~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
+.++|+|||+ |..|.++|+.|...|. +|+++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 4578999998 9999999999999984 89999975
No 410
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.08 E-value=0.26 Score=43.03 Aligned_cols=33 Identities=36% Similarity=0.605 Sum_probs=30.6
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+.|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999999863
No 411
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.08 E-value=0.26 Score=47.19 Aligned_cols=34 Identities=15% Similarity=0.221 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|.|||.|..|.+.|..|.++|++|.+++++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467999999999999999999999999999976
No 412
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.03 E-value=0.19 Score=50.46 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|+|||+|-+|...|..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3578999999999999999999999999999975
No 413
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.03 E-value=0.25 Score=43.80 Aligned_cols=32 Identities=28% Similarity=0.444 Sum_probs=29.7
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 48 KKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++|+|+|| |..|...+..|.++|++|+++.++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 46999996 999999999999999999999986
No 414
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.98 E-value=0.2 Score=47.25 Aligned_cols=35 Identities=26% Similarity=0.250 Sum_probs=30.9
Q ss_pred CCCCcEEEECCC-HHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSG-WAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG-~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
-..++|+|||+| +.|..+|..|...|.+|++.+++
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 356799999999 78999999999999999998764
No 415
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.96 E-value=0.23 Score=47.15 Aligned_cols=34 Identities=26% Similarity=0.457 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
..++|+|||+|..|.+.|+.|+..|. ++.++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34689999999999999999999987 89999975
No 416
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.95 E-value=0.17 Score=50.95 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~--G~~V~vlE~~~ 80 (533)
++|.|||+|..|+..|..|+++ |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999999 89999999863
No 417
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.94 E-value=0.3 Score=44.98 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=30.6
Q ss_pred CCCCcEEEECC-CH-HHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGS-GW-AGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGa-G~-aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
...+.|+|.|| |- .|...|..|+++|++|+++.++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 34567999999 74 9999999999999999999876
No 418
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.91 E-value=0.21 Score=53.20 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..++|.|||+|..|...|..|+++|++|+++|+++
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 44689999999999999999999999999999873
No 419
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.90 E-value=0.16 Score=47.37 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=30.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...+|+|||+|.+|+-.|..|++.| +|+++++.+
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 3568999999999999999999999 999998763
No 420
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.78 E-value=0.17 Score=49.36 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-------CeEEEEcCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQG-------FDVTVLDDGNG 81 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G-------~~V~vlE~~~~ 81 (533)
+++|.|||+|..|...|..|+++| ++|++++++..
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 357999999999999999999999 99999998743
No 421
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.77 E-value=0.22 Score=45.86 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-CeEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQG-FDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G-~~V~vlE~~ 79 (533)
++|.|||+|..|...|..|++.| ++|++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 36999999999999999999999 999999976
No 422
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.62 E-value=0.3 Score=45.45 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---eEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGF---DVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~---~V~vlE~~ 79 (533)
+++|.|||+|..|.+.|..|.++|+ +|++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCC
Confidence 4689999999999999999999998 99999986
No 423
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.55 E-value=0.23 Score=46.05 Aligned_cols=34 Identities=15% Similarity=0.297 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|+|+|+|-+|...|+.|++.|.+|+|+.++
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3468999999999999999999999999999886
No 424
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.54 E-value=0.23 Score=46.68 Aligned_cols=33 Identities=33% Similarity=0.303 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|.+.|++|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999876
No 425
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.53 E-value=0.27 Score=46.16 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..++|+|||+|-+|..+|+.|.+.|. +|+|+.++
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45689999999999999999999998 99999886
No 426
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.52 E-value=0.25 Score=47.49 Aligned_cols=38 Identities=29% Similarity=0.339 Sum_probs=30.8
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 44 GKNKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 44 ~~~~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..+.+.|+|.|| |..|...+..|.++|++|+++.+...
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 445678999999 99999999999999999999998753
No 427
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.43 E-value=0.15 Score=50.33 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=28.6
Q ss_pred CcEEEECCCHHHHHHHHHHHH-CCCeEEEEcC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSK-QGFDVTVLDD 78 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~-~G~~V~vlE~ 78 (533)
++|.|||+|..|...|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 589999999999999999998 4999999983
No 428
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.42 E-value=0.31 Score=45.36 Aligned_cols=32 Identities=28% Similarity=0.541 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
++|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 99999876
No 429
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.38 E-value=0.3 Score=43.45 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=29.7
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 48 KKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++|+|.|| |..|...+..|.++|++|.++.++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 36999998 999999999999999999999876
No 430
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.35 E-value=0.32 Score=44.27 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC----eEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGF----DVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~----~V~vlE~~ 79 (533)
++|.|||+|..|...|..|.++|+ +|.+++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 589999999999999999999998 99999986
No 431
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.29 E-value=0.3 Score=47.63 Aligned_cols=35 Identities=40% Similarity=0.482 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
....|+|||+|..|+.+|..++..|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45689999999999999999999999999999763
No 432
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=90.24 E-value=0.18 Score=47.34 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=29.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|.+.|++|++++ +
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~ 34 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-I 34 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-S
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-C
Confidence 3589999999999999999999999999998 5
No 433
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.21 E-value=0.34 Score=45.35 Aligned_cols=33 Identities=24% Similarity=0.507 Sum_probs=30.6
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
|+|+|.|| |+.|...+.+|.++|++|+++-|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 57999999 9999999999999999999998764
No 434
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.19 E-value=0.26 Score=46.25 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++|.|||+|..|...|..|.+.|++|++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999999976
No 435
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.17 E-value=0.25 Score=45.35 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|.+.|++|.+++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 368999999999999999999999999999876
No 436
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.09 E-value=0.32 Score=45.96 Aligned_cols=36 Identities=39% Similarity=0.502 Sum_probs=32.2
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
++++|+|.|| |..|...+..|.++|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4578999999 99999999999999999999998754
No 437
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.07 E-value=0.25 Score=48.91 Aligned_cols=33 Identities=36% Similarity=0.566 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.+..|||.|..|+..|..|+++|++|+++|.+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 478999999999999999999999999999874
No 438
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=90.06 E-value=0.2 Score=47.75 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=29.8
Q ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCC--CeEEEEcCC
Q 009508 46 NKKKIVVVG-SGWAGLGAAHHLSKQG--FDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIG-aG~aGL~aA~~L~~~G--~~V~vlE~~ 79 (533)
++++|+||| +|..|.+.|..|.++| .+|.++|..
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~ 43 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVV 43 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 456899999 7999999999999998 789999965
No 439
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.05 E-value=0.12 Score=46.81 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=29.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.+.+|+|+|+|-.|...|..|.+.|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 35689999999999999999999999 99999874
No 440
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.99 E-value=0.24 Score=45.64 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCe-EEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFD-VTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~-V~vlE~~ 79 (533)
.++|.|||+|..|...|..|++.|++ |.+++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 36899999999999999999999999 8999876
No 441
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.94 E-value=0.32 Score=49.18 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
++|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999863
No 442
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=89.92 E-value=0.24 Score=47.95 Aligned_cols=40 Identities=30% Similarity=0.548 Sum_probs=34.7
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCC---eEEEEcCCC-CCCCC
Q 009508 46 NKKKIVVVGS-GWAGLGAAHHLSKQGF---DVTVLDDGN-GFGSP 85 (533)
Q Consensus 46 ~~~dVvVIGa-G~aGL~aA~~L~~~G~---~V~vlE~~~-~~GG~ 85 (533)
...+|+|||| |.+|+.|+..+..-|. +|+++|.+. .-||+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4569999999 9999999999999998 999999875 44664
No 443
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.91 E-value=0.26 Score=47.31 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=29.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
...+|+|||+|.+|+-+|..|++.| +|+++++.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 3478999999999999999999998 69999977
No 444
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=89.86 E-value=0.26 Score=52.81 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=32.2
Q ss_pred CCCcEEEEC--CCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVG--SGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIG--aG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
...+|+||| +|..|+-+|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 346899999 99999999999999999999999885
No 445
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.65 E-value=0.27 Score=50.72 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 81 (533)
..++|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 357899999999999999999999999999998764
No 446
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.62 E-value=0.36 Score=48.91 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 447
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=89.55 E-value=0.36 Score=48.70 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+++|.|||+|..|...|..|+++|++|++++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 468999999999999999999999999999986
No 448
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.54 E-value=0.27 Score=45.93 Aligned_cols=31 Identities=29% Similarity=0.476 Sum_probs=28.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++|.|||+|..|...|..|++ |++|++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 479999999999999999999 9999999976
No 449
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.51 E-value=0.32 Score=45.15 Aligned_cols=33 Identities=30% Similarity=0.395 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.++|+|||+|-.|.+.|..|.+.|.+|++++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 468999999999999999999999999999986
No 450
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.45 E-value=0.5 Score=41.95 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=29.1
Q ss_pred CcEEEECC-CHHHHHHHHHHH-HCCCeEEEEcCC
Q 009508 48 KKIVVVGS-GWAGLGAAHHLS-KQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGa-G~aGL~aA~~L~-~~G~~V~vlE~~ 79 (533)
+.|+|.|| |..|...|..|+ ++|++|+++.++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 45999996 999999999999 899999999886
No 451
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.38 E-value=0.39 Score=45.80 Aligned_cols=38 Identities=24% Similarity=0.416 Sum_probs=32.8
Q ss_pred CCCCCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 43 NGKNKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 43 ~~~~~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+....+.|+|.|| |..|...|..|.++|++|+++.+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3345578999998 9999999999999999999999853
No 452
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.36 E-value=0.39 Score=45.69 Aligned_cols=35 Identities=29% Similarity=0.474 Sum_probs=30.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
.++++|+|||+|-.|.+.|+.|+..+. ++.|+|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 345799999999999999999998876 89999975
No 453
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.30 E-value=0.42 Score=47.76 Aligned_cols=34 Identities=35% Similarity=0.375 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+.|+|+|+|-.|..+|..|+..|.+|++.|.+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4578999999999999999999999999999976
No 454
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=89.28 E-value=0.32 Score=44.79 Aligned_cols=55 Identities=18% Similarity=0.254 Sum_probs=28.1
Q ss_pred CcceeecCcCCcccCCCccccCCCCCCCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 20 NGFCCRASTLQSNANGDRNSTNNNGKNKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++++|...+..+ .++......+.+.|+|.|| |-.|...|..|+++|++|+++...
T Consensus 4 ~~~~~~~~~~~~-----~n~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 4 HHHHSSGVDLGT-----ENLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp --------------------------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccccccccccCC-----hhhhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 345565555544 1121222234457888887 777999999999999999886644
No 455
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=89.26 E-value=0.27 Score=46.93 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=29.9
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCC-------eEEEEcCC
Q 009508 46 NKKKIVVVGS-GWAGLGAAHHLSKQGF-------DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGa-G~aGL~aA~~L~~~G~-------~V~vlE~~ 79 (533)
++++|+|||| |..|.+.++.|..+|. +|.++|..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 4568999998 9999999999999885 79999865
No 456
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.23 E-value=0.33 Score=43.33 Aligned_cols=34 Identities=32% Similarity=0.558 Sum_probs=31.0
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 368999996 9999999999999999999999873
No 457
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.19 E-value=0.51 Score=45.50 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=31.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
-..+.|+|+|+|-.|..+|..|.+.|.+|++.|.+
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45578999999999999999999999999998854
No 458
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.18 E-value=0.53 Score=43.44 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..++++|+|+|-+|.++|+.|++.|. +|+|+.|+
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999996 99999876
No 459
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.18 E-value=0.35 Score=48.79 Aligned_cols=32 Identities=31% Similarity=0.529 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
++|.|||+|..|...|..|+++|++|++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999986
No 460
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=89.16 E-value=0.43 Score=44.27 Aligned_cols=35 Identities=23% Similarity=0.159 Sum_probs=31.2
Q ss_pred CCCCcEEEECCC-HHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSG-WAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG-~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
-..++|+|||+| +.|..+|..|.+.|.+|+++.+.
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 356799999999 78999999999999999999754
No 461
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.15 E-value=0.41 Score=53.42 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 80 (533)
..+|+|||||..|+-+|..|.+.|. +|+|+++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3589999999999999999999996 899999875
No 462
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=89.13 E-value=0.19 Score=55.73 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSI 319 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc
Confidence 368999999999999999999999999999998765
No 463
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.08 E-value=0.44 Score=44.83 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|.|||+|-.|...|..|...|.+|++++++
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 4578999999999999999999999999999976
No 464
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.06 E-value=0.53 Score=43.76 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..++++|+|+|-+|.++|+.|++.|. +|+|+.|+
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 45789999999999999999999998 79999876
No 465
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.02 E-value=0.35 Score=44.81 Aligned_cols=35 Identities=29% Similarity=0.310 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 80 (533)
..++++|||+|-+|..+|+.|.+.|. +|+|+.|+.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 35689999999999999999999998 899998874
No 466
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=88.93 E-value=0.39 Score=46.35 Aligned_cols=34 Identities=29% Similarity=0.563 Sum_probs=29.7
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCC-CeEEEEcCCC
Q 009508 47 KKKIVVVGS-GWAGLGAAHHLSKQG-FDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGa-G~aGL~aA~~L~~~G-~~V~vlE~~~ 80 (533)
.+.|+|.|| |..|...+..|.++| ++|+++.+..
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~ 81 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK 81 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 468999999 999999999999999 9999998763
No 467
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.85 E-value=0.52 Score=44.48 Aligned_cols=34 Identities=18% Similarity=0.372 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..++++|+|+|-+|.++|+.|++.|. +|+|+.|+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45789999999999999999999998 89999886
No 468
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.77 E-value=0.47 Score=45.46 Aligned_cols=34 Identities=35% Similarity=0.460 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.++|.|||+|..|.+.|..|++.|++|++.++++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 3579999999999999999999999999999864
No 469
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=88.76 E-value=0.39 Score=44.14 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=28.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDD 78 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~ 78 (533)
++|.|||+|..|...|..|++.|++|+++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 3699999999999999999999999999765
No 470
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=88.72 E-value=0.42 Score=45.91 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=31.0
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.+++|+|+|| |..|...+..|.++|++|.++.+++
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3568999999 9999999999999999999999874
No 471
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=88.70 E-value=0.33 Score=45.56 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=28.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
.+|-+||-|..|..-|..|.++|++|++++++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999874
No 472
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.68 E-value=0.48 Score=44.35 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..++|.|||+|-.|...|..|...|.+|++++++
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4578999999999999999999999999999976
No 473
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=88.65 E-value=0.49 Score=43.90 Aligned_cols=34 Identities=26% Similarity=0.269 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..++++|||+|-+|-++|+.|.+.|. +|+|+.|.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999998 89999876
No 474
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.62 E-value=0.38 Score=44.83 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
...+|+|||+|-.|..+|..|+..|+ +++|+|..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45689999999999999999999996 89999965
No 475
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.60 E-value=0.39 Score=44.84 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=29.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQ--GFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~--G~~V~vlE~~ 79 (533)
.++|.|||+|..|...|..|++. |++|++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 46899999999999999999988 6799999876
No 476
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=88.58 E-value=0.44 Score=47.86 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=30.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--------------------C-CeEEEEcCCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQ--------------------G-FDVTVLDDGNG 81 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~--------------------G-~~V~vlE~~~~ 81 (533)
...+|+|||+|.+|+-+|..|++. | .+|+|+++++.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 357899999999999999999974 5 49999998754
No 477
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=88.53 E-value=0.38 Score=44.93 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=28.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 48 KKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 48 ~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
++|.|||+|-.|.++|+.|..++. ++.|+|..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 579999999999999999988875 79999975
No 478
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.49 E-value=0.36 Score=45.75 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=29.7
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCC--CeEEEEcCCC
Q 009508 48 KKIVVVGS-GWAGLGAAHHLSKQG--FDVTVLDDGN 80 (533)
Q Consensus 48 ~dVvVIGa-G~aGL~aA~~L~~~G--~~V~vlE~~~ 80 (533)
++|+|||| |..|.+.|+.|++.| .+|.++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 47999998 999999999999988 6899999864
No 479
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.35 E-value=0.42 Score=44.60 Aligned_cols=33 Identities=27% Similarity=0.466 Sum_probs=29.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+.++|+|+|-.|...|..|++.| +|+++.++
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 3468999999999999999999999 99999876
No 480
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.35 E-value=0.54 Score=44.66 Aligned_cols=34 Identities=26% Similarity=0.515 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
...+|+|||+|-.|..+|..|+..|+ +++|+|..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 35789999999999999999999997 79999975
No 481
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.33 E-value=0.46 Score=45.05 Aligned_cols=33 Identities=30% Similarity=0.539 Sum_probs=29.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--eEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGF--DVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~--~V~vlE~~ 79 (533)
+++|+|||+|-.|.+.|+.|+..+. ++.++|..
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 3689999999999999999999876 89999975
No 482
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=88.27 E-value=0.29 Score=44.07 Aligned_cols=37 Identities=14% Similarity=0.279 Sum_probs=31.1
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHCC-CeEEEEcCCC
Q 009508 44 GKNKKKIVVVGS-GWAGLGAAHHLSKQG-FDVTVLDDGN 80 (533)
Q Consensus 44 ~~~~~dVvVIGa-G~aGL~aA~~L~~~G-~~V~vlE~~~ 80 (533)
+++++.|+|.|| |..|...|..|.++| ++|+++.++.
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 344578999995 999999999999999 8999998863
No 483
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=88.15 E-value=0.51 Score=43.81 Aligned_cols=35 Identities=31% Similarity=0.415 Sum_probs=30.8
Q ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
-..++|+|||+ |+.|..+|..|.+.|.+|++..+.
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 35679999995 579999999999999999999874
No 484
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=88.13 E-value=0.47 Score=50.44 Aligned_cols=38 Identities=26% Similarity=0.461 Sum_probs=33.6
Q ss_pred CCCcEEEEC--CCHHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 009508 46 NKKKIVVVG--SGWAGLGAAHHLSKQGFDVTVLDDGNGFG 83 (533)
Q Consensus 46 ~~~dVvVIG--aG~aGL~aA~~L~~~G~~V~vlE~~~~~G 83 (533)
...+|+||| +|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS 561 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc
Confidence 346799999 99999999999999999999999886643
No 485
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.02 E-value=0.59 Score=43.38 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..++++|+|+|-+|...|+.|++.|. +|+|+.|+
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 45789999999999999999999996 99999876
No 486
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=88.02 E-value=0.54 Score=43.00 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=31.0
Q ss_pred CCCCcEEEECCC-HHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSG-WAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG-~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
-..++|+|||+| +.|..+|..|.+.|.+|++..+.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 456899999976 79999999999999999999764
No 487
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=88.01 E-value=1 Score=46.31 Aligned_cols=38 Identities=32% Similarity=0.450 Sum_probs=34.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCC
Q 009508 45 KNKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGNGF 82 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 82 (533)
+..+|+||||||.+|+++|.+|+++|++|+|||++...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 45689999999999999999999999999999998653
No 488
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.01 E-value=0.5 Score=43.07 Aligned_cols=33 Identities=27% Similarity=0.465 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..+|+|||+|-.|..+|..|+..|. +++|+|..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5689999999999999999999997 89999976
No 489
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=88.00 E-value=0.5 Score=43.52 Aligned_cols=35 Identities=23% Similarity=0.167 Sum_probs=31.2
Q ss_pred CCCCcEEEECCC-HHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSG-WAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG-~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
-..++|+|||+| +.|..+|..|.+.|.+|++..+.
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 456799999999 68999999999999999999755
No 490
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.82 E-value=0.55 Score=42.83 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 49 KIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 49 dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
+++|||+|-+|-+.++.|.+.|. +|+|+.|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 89999999999999999999998 99999986
No 491
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=87.78 E-value=0.48 Score=46.44 Aligned_cols=35 Identities=31% Similarity=0.343 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..+.|+|||.|..|..+|..|...|.+|++.|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45789999999999999999999999999999764
No 492
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=87.75 E-value=0.77 Score=43.73 Aligned_cols=35 Identities=17% Similarity=0.356 Sum_probs=31.3
Q ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.+.+.|+|.|| |..|...+..|.++|++|+++.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34568999998 999999999999999999999875
No 493
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=87.61 E-value=0.36 Score=45.99 Aligned_cols=41 Identities=20% Similarity=0.392 Sum_probs=30.7
Q ss_pred CCCCCceEEecccccC-----CCCCchhhHHHHHHHHHHHHHHHHhC
Q 009508 450 FTSFPNLFMAGDWITT-----RHGSWSQERSYVTGLEAANRVVDYLG 491 (533)
Q Consensus 450 ~~~~~~l~~aG~~~~~-----g~~~~~iegA~~SG~~aA~~Il~~~g 491 (533)
.+.+||||.|||.+.. .++ .+.-+++.||++||+.|++.|.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmG-p~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMG-PTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCc-hHHHHHHHHHHHHHHHHHHHhc
Confidence 4578999999997632 122 2455678899999999999873
No 494
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=87.58 E-value=0.4 Score=48.66 Aligned_cols=35 Identities=31% Similarity=0.539 Sum_probs=30.3
Q ss_pred CCCCcEEEECCCHHHHH-HHHHHHHCCCeEEEEcCC
Q 009508 45 KNKKKIVVVGSGWAGLG-AAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 45 ~~~~dVvVIGaG~aGL~-aA~~L~~~G~~V~vlE~~ 79 (533)
...++|.|||.|-+|++ +|..|.++|++|++.|..
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~ 55 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLA 55 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECC
Confidence 34578999999999997 699999999999999975
No 495
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.45 E-value=0.72 Score=43.00 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=30.9
Q ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 46 NKKKIVVVG-SGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIG-aG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
..+.++|+| +|-.|...|..|++.|.+|+++.++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 446899999 8999999999999999999999876
No 496
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=87.43 E-value=0.72 Score=43.44 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=30.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEcCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGF-DVTVLDDG 79 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~-~V~vlE~~ 79 (533)
..++++|+|+|-+|-++|+.|++.|. +|+|+.|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45789999999999999999999998 89999886
No 497
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=87.31 E-value=0.47 Score=47.46 Aligned_cols=33 Identities=27% Similarity=0.420 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 47 KKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 47 ~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
.++|+|+|+|..|...|..|++.|++|++++++
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 467999999999999999999999999999876
No 498
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=87.31 E-value=0.62 Score=40.59 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=29.2
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 47 KKKIVVVGS-GWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 47 ~~dVvVIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
+++|+|.|| |..|...|..|+ +|++|+++.++.
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~ 36 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHS 36 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSS
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCc
Confidence 347999997 899999999999 999999999874
No 499
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=87.21 E-value=0.67 Score=46.66 Aligned_cols=35 Identities=31% Similarity=0.450 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCeEEEEcCCC
Q 009508 46 NKKKIVVVGSGWAGLGAAHHLSKQGFDVTVLDDGN 80 (533)
Q Consensus 46 ~~~dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 80 (533)
..+.|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999763
No 500
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.18 E-value=0.63 Score=42.76 Aligned_cols=31 Identities=32% Similarity=0.477 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEcCC
Q 009508 49 KIVVVGSGWAGLGAAHHLSKQGFDVTVLDDG 79 (533)
Q Consensus 49 dVvVIGaG~aGL~aA~~L~~~G~~V~vlE~~ 79 (533)
+|+|||+|-.|...|..|.+.|.+|++++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 8999999999999999999999999999876
Done!