Query 009511
Match_columns 533
No_of_seqs 301 out of 1385
Neff 5.2
Searched_HMMs 46136
Date Thu Mar 28 14:00:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009511.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009511hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 4E-168 8E-173 1350.3 41.6 509 1-530 1-510 (620)
2 KOG0873 C-4 sterol methyl oxid 100.0 1.3E-33 2.9E-38 282.8 15.1 213 52-277 37-260 (283)
3 COG3000 ERG3 Sterol desaturase 99.9 1.4E-27 3E-32 241.4 15.4 155 127-290 94-250 (271)
4 KOG0872 Sterol C5 desaturase [ 99.9 1.1E-22 2.5E-27 202.2 11.8 143 127-283 127-269 (312)
5 KOG0874 Sphingolipid hydroxyla 99.8 3.7E-22 8.1E-27 193.3 1.8 145 128-282 122-271 (287)
6 PF12076 Wax2_C: WAX2 C-termin 99.8 3.8E-19 8.3E-24 165.8 5.0 56 466-523 1-56 (164)
7 PF04116 FA_hydroxylase: Fatty 99.7 1.3E-17 2.8E-22 144.9 7.2 111 134-254 3-114 (114)
8 PLN02434 fatty acid hydroxylas 99.2 3.7E-10 8.1E-15 112.8 15.1 134 128-277 83-230 (237)
9 PRK14982 acyl-ACP reductase; P 98.3 5.8E-06 1.3E-10 87.1 11.2 176 302-507 2-201 (340)
10 KOG0539 Sphingolipid fatty aci 98.0 2.1E-05 4.5E-10 77.3 7.7 137 129-278 84-234 (240)
11 PLN02601 beta-carotene hydroxy 97.6 0.00063 1.4E-08 69.3 11.1 132 118-265 126-272 (303)
12 PRK07424 bifunctional sterol d 97.0 0.0022 4.7E-08 69.4 8.9 135 138-276 18-175 (406)
13 cd01078 NAD_bind_H4MPT_DH NADP 95.1 0.019 4.2E-07 55.0 3.4 49 446-496 2-59 (194)
14 PF10520 Kua-UEV1_localn: Kua- 94.2 0.083 1.8E-06 51.4 5.4 57 215-274 99-156 (178)
15 COG4221 Short-chain alcohol de 93.5 0.099 2.1E-06 53.2 4.7 44 464-509 7-52 (246)
16 KOG1014 17 beta-hydroxysteroid 92.3 0.13 2.8E-06 54.0 3.8 46 464-511 50-97 (312)
17 COG5322 Predicted dehydrogenas 92.2 0.63 1.4E-05 48.4 8.5 100 390-494 87-196 (351)
18 PLN03209 translocon at the inn 91.8 0.3 6.4E-06 55.4 6.1 59 434-494 40-109 (576)
19 PRK06482 short chain dehydroge 91.8 0.26 5.6E-06 49.0 5.1 43 463-507 2-46 (276)
20 COG0300 DltE Short-chain dehyd 91.4 0.25 5.5E-06 50.9 4.6 49 461-511 4-54 (265)
21 PRK08265 short chain dehydroge 90.5 0.37 8E-06 47.7 4.8 41 464-506 7-49 (261)
22 PRK06196 oxidoreductase; Provi 90.4 0.5 1.1E-05 48.4 5.7 41 452-494 15-55 (315)
23 TIGR01832 kduD 2-deoxy-D-gluco 90.4 0.36 7.9E-06 46.8 4.5 33 463-497 5-37 (248)
24 PRK05867 short chain dehydroge 90.1 0.48 1E-05 46.4 5.2 43 462-506 8-52 (253)
25 PRK06924 short chain dehydroge 89.7 0.34 7.4E-06 47.2 3.8 31 464-496 2-32 (251)
26 PRK09186 flagellin modificatio 89.6 0.49 1.1E-05 46.1 4.7 38 464-503 5-44 (256)
27 PRK06949 short chain dehydroge 89.3 0.64 1.4E-05 45.3 5.4 44 461-506 7-52 (258)
28 PRK07890 short chain dehydroge 89.1 0.53 1.2E-05 45.9 4.7 30 464-495 6-35 (258)
29 PRK12825 fabG 3-ketoacyl-(acyl 89.1 0.56 1.2E-05 44.9 4.7 29 464-494 7-35 (249)
30 PRK08264 short chain dehydroge 89.1 0.41 8.8E-06 46.2 3.8 31 464-496 7-38 (238)
31 PRK07577 short chain dehydroge 89.1 0.4 8.8E-06 46.0 3.7 32 464-497 4-35 (234)
32 PRK05993 short chain dehydroge 89.1 0.59 1.3E-05 46.8 5.0 39 464-504 5-45 (277)
33 PLN02780 ketoreductase/ oxidor 89.0 0.52 1.1E-05 49.0 4.7 41 464-506 54-96 (320)
34 KOG1208 Dehydrogenases with di 89.0 0.48 1E-05 49.8 4.5 43 450-494 22-64 (314)
35 PRK07063 short chain dehydroge 88.9 0.58 1.3E-05 46.0 4.8 41 464-506 8-50 (260)
36 PRK05854 short chain dehydroge 88.9 0.56 1.2E-05 48.3 4.8 39 464-504 15-55 (313)
37 TIGR01963 PHB_DH 3-hydroxybuty 88.8 0.58 1.3E-05 45.3 4.6 40 464-505 2-43 (255)
38 PRK08340 glucose-1-dehydrogena 88.8 0.59 1.3E-05 46.1 4.7 30 465-496 2-31 (259)
39 PRK12829 short chain dehydroge 88.7 0.71 1.5E-05 45.1 5.2 31 464-496 12-42 (264)
40 PRK07062 short chain dehydroge 88.6 0.51 1.1E-05 46.5 4.1 42 463-506 8-51 (265)
41 PRK06841 short chain dehydroge 88.6 0.49 1.1E-05 46.1 4.0 34 463-498 15-48 (255)
42 PRK12429 3-hydroxybutyrate deh 88.5 0.65 1.4E-05 45.1 4.8 29 464-494 5-33 (258)
43 TIGR03325 BphB_TodD cis-2,3-di 88.3 0.67 1.4E-05 45.8 4.8 41 463-505 5-47 (262)
44 PRK07478 short chain dehydroge 88.3 0.67 1.4E-05 45.4 4.7 40 464-505 7-48 (254)
45 PF13460 NAD_binding_10: NADH( 88.3 0.51 1.1E-05 43.8 3.7 27 466-494 1-27 (183)
46 PRK06179 short chain dehydroge 88.2 0.54 1.2E-05 46.5 4.0 32 464-497 5-36 (270)
47 PRK07825 short chain dehydroge 88.1 0.72 1.6E-05 45.7 4.9 29 464-494 6-34 (273)
48 PRK07523 gluconate 5-dehydroge 88.1 0.84 1.8E-05 44.7 5.3 33 462-496 9-41 (255)
49 PRK06124 gluconate 5-dehydroge 88.0 0.85 1.8E-05 44.6 5.3 38 457-496 5-42 (256)
50 PRK06182 short chain dehydroge 88.0 0.77 1.7E-05 45.6 5.0 30 464-495 4-33 (273)
51 PRK07454 short chain dehydroge 87.9 0.91 2E-05 44.0 5.4 33 462-496 5-37 (241)
52 PRK05557 fabG 3-ketoacyl-(acyl 87.9 0.91 2E-05 43.5 5.3 29 464-494 6-34 (248)
53 PF00106 adh_short: short chai 87.8 0.62 1.4E-05 42.3 3.9 43 464-508 1-48 (167)
54 PRK07024 short chain dehydroge 87.7 0.84 1.8E-05 44.9 5.1 43 464-508 3-47 (257)
55 PRK08177 short chain dehydroge 87.7 0.59 1.3E-05 45.0 3.9 30 464-495 2-31 (225)
56 PRK09135 pteridine reductase; 87.7 0.84 1.8E-05 43.9 5.0 31 463-495 6-36 (249)
57 PRK12481 2-deoxy-D-gluconate 3 87.5 0.75 1.6E-05 45.4 4.5 32 463-496 8-39 (251)
58 PRK12742 oxidoreductase; Provi 87.5 0.85 1.8E-05 43.9 4.8 41 463-505 6-49 (237)
59 PRK06197 short chain dehydroge 87.5 0.67 1.5E-05 47.1 4.3 37 458-496 10-47 (306)
60 PRK05717 oxidoreductase; Valid 87.5 1 2.2E-05 44.3 5.4 35 459-495 6-40 (255)
61 PRK05884 short chain dehydroge 87.4 0.81 1.7E-05 44.5 4.7 39 465-505 2-42 (223)
62 PRK05872 short chain dehydroge 87.4 0.99 2.1E-05 45.9 5.5 44 463-508 9-54 (296)
63 PRK08063 enoyl-(acyl carrier p 87.4 0.89 1.9E-05 44.1 4.9 29 464-494 5-33 (250)
64 PLN02253 xanthoxin dehydrogena 87.3 0.94 2E-05 45.1 5.2 30 464-495 19-48 (280)
65 PRK06500 short chain dehydroge 87.3 0.91 2E-05 43.9 4.9 41 464-506 7-49 (249)
66 PRK08589 short chain dehydroge 87.2 0.76 1.7E-05 45.9 4.4 31 464-496 7-37 (272)
67 PRK06180 short chain dehydroge 87.0 0.92 2E-05 45.3 4.9 41 463-505 4-46 (277)
68 PRK12826 3-ketoacyl-(acyl-carr 86.9 0.73 1.6E-05 44.4 4.0 31 464-496 7-37 (251)
69 PRK07856 short chain dehydroge 86.6 0.75 1.6E-05 45.0 4.0 33 463-497 6-38 (252)
70 PRK06398 aldose dehydrogenase; 86.6 0.71 1.5E-05 45.7 3.8 31 464-496 7-37 (258)
71 PRK06101 short chain dehydroge 86.5 1 2.3E-05 43.9 4.9 31 464-496 2-32 (240)
72 PRK07326 short chain dehydroge 86.4 0.97 2.1E-05 43.5 4.6 31 464-496 7-37 (237)
73 PRK07231 fabG 3-ketoacyl-(acyl 86.4 1 2.2E-05 43.5 4.7 31 464-496 6-36 (251)
74 PRK12939 short chain dehydroge 86.4 1 2.3E-05 43.4 4.8 31 463-495 7-37 (250)
75 COG1484 DnaC DNA replication p 86.2 1.2 2.7E-05 45.2 5.4 85 423-508 62-153 (254)
76 PRK07889 enoyl-(acyl carrier p 86.2 1 2.2E-05 44.7 4.7 44 464-508 8-56 (256)
77 PRK08643 acetoin reductase; Va 86.1 1.1 2.3E-05 43.9 4.7 41 464-506 3-45 (256)
78 PRK05866 short chain dehydroge 86.1 1 2.3E-05 45.8 4.8 30 464-495 41-70 (293)
79 PRK06077 fabG 3-ketoacyl-(acyl 86.1 0.93 2E-05 43.9 4.3 29 464-494 7-35 (252)
80 PRK08251 short chain dehydroge 86.0 0.98 2.1E-05 43.8 4.4 40 464-505 3-44 (248)
81 PRK08339 short chain dehydroge 86.0 1.1 2.3E-05 44.8 4.7 40 464-505 9-50 (263)
82 PRK08085 gluconate 5-dehydroge 86.0 1.1 2.4E-05 43.8 4.8 32 462-495 8-39 (254)
83 PRK06523 short chain dehydroge 85.9 0.8 1.7E-05 44.9 3.8 33 463-497 9-41 (260)
84 PRK06200 2,3-dihydroxy-2,3-dih 85.9 1.2 2.5E-05 44.0 4.9 42 464-507 7-50 (263)
85 PRK08017 oxidoreductase; Provi 85.9 1.2 2.6E-05 43.4 5.0 30 464-495 3-32 (256)
86 PRK06947 glucose-1-dehydrogena 85.9 0.94 2E-05 44.0 4.2 29 464-494 3-31 (248)
87 PRK09291 short chain dehydroge 85.8 0.91 2E-05 44.2 4.1 29 464-494 3-31 (257)
88 PRK05653 fabG 3-ketoacyl-(acyl 85.8 1.2 2.5E-05 42.7 4.7 31 464-496 6-36 (246)
89 TIGR03649 ergot_EASG ergot alk 85.7 0.7 1.5E-05 46.3 3.3 28 466-495 2-29 (285)
90 PRK06483 dihydromonapterin red 85.6 0.99 2.1E-05 43.7 4.2 32 463-496 2-33 (236)
91 PRK06194 hypothetical protein; 85.6 1.1 2.5E-05 44.5 4.8 30 464-495 7-36 (287)
92 PRK08267 short chain dehydroge 85.5 1.2 2.7E-05 43.6 4.9 41 464-506 2-44 (260)
93 PRK07023 short chain dehydroge 85.3 0.87 1.9E-05 44.3 3.7 31 464-496 2-32 (243)
94 PRK10538 malonic semialdehyde 85.3 1.3 2.7E-05 43.4 4.8 39 465-505 2-42 (248)
95 PRK07102 short chain dehydroge 85.1 1.3 2.8E-05 43.1 4.8 31 464-496 2-32 (243)
96 PRK08213 gluconate 5-dehydroge 85.0 1.3 2.9E-05 43.4 4.8 29 464-494 13-41 (259)
97 PRK12824 acetoacetyl-CoA reduc 85.0 1.2 2.6E-05 42.9 4.4 31 464-496 3-33 (245)
98 PRK08993 2-deoxy-D-gluconate 3 84.9 1.3 2.8E-05 43.6 4.7 38 456-495 3-40 (253)
99 PRK12828 short chain dehydroge 84.8 1.4 3.1E-05 42.0 4.8 32 464-497 8-39 (239)
100 PRK06935 2-deoxy-D-gluconate 3 84.7 1.3 2.8E-05 43.5 4.6 32 462-495 14-45 (258)
101 PRK05876 short chain dehydroge 84.6 1.4 2.9E-05 44.5 4.8 29 464-494 7-35 (275)
102 PRK08945 putative oxoacyl-(acy 84.5 1.1 2.4E-05 43.6 4.0 33 462-496 11-43 (247)
103 PRK08862 short chain dehydroge 84.5 1.4 3.1E-05 43.2 4.7 30 464-495 6-35 (227)
104 PRK12384 sorbitol-6-phosphate 84.4 1.5 3.2E-05 43.0 4.8 30 464-495 3-32 (259)
105 PRK08263 short chain dehydroge 84.3 1.5 3.3E-05 43.6 5.0 30 464-495 4-33 (275)
106 PRK06914 short chain dehydroge 84.3 1.5 3.1E-05 43.6 4.8 30 464-495 4-33 (280)
107 PRK05786 fabG 3-ketoacyl-(acyl 84.2 1.5 3.3E-05 42.1 4.8 30 464-495 6-35 (238)
108 PRK06057 short chain dehydroge 83.9 1.6 3.4E-05 42.8 4.8 40 464-505 8-49 (255)
109 PRK06953 short chain dehydroge 83.8 1.6 3.4E-05 42.0 4.7 30 464-495 2-31 (222)
110 PRK07067 sorbitol dehydrogenas 83.7 1.6 3.5E-05 42.7 4.8 29 464-494 7-35 (257)
111 PRK07677 short chain dehydroge 83.7 1.6 3.4E-05 42.7 4.7 40 464-505 2-43 (252)
112 PRK06125 short chain dehydroge 83.7 1.3 2.9E-05 43.5 4.2 41 464-506 8-50 (259)
113 PRK08703 short chain dehydroge 83.6 1.6 3.5E-05 42.3 4.7 30 464-495 7-36 (239)
114 PRK08220 2,3-dihydroxybenzoate 83.6 1.3 2.8E-05 43.0 4.1 34 464-499 9-42 (252)
115 PRK06139 short chain dehydroge 83.4 1.5 3.3E-05 45.8 4.7 42 463-506 7-50 (330)
116 PRK12823 benD 1,6-dihydroxycyc 83.4 1.6 3.6E-05 42.7 4.7 32 464-497 9-40 (260)
117 PRK09072 short chain dehydroge 83.3 1.7 3.7E-05 42.8 4.8 41 464-506 6-48 (263)
118 PRK12937 short chain dehydroge 83.1 1.8 3.9E-05 41.7 4.8 29 464-494 6-34 (245)
119 PRK07774 short chain dehydroge 83.1 1.8 3.9E-05 41.9 4.8 32 464-497 7-38 (250)
120 PRK07060 short chain dehydroge 82.9 2.2 4.8E-05 41.1 5.3 33 462-496 8-40 (245)
121 PRK07109 short chain dehydroge 82.9 1.7 3.7E-05 45.3 4.9 41 463-505 8-50 (334)
122 PRK07985 oxidoreductase; Provi 82.8 1.6 3.5E-05 44.4 4.5 30 464-495 50-79 (294)
123 CHL00194 ycf39 Ycf39; Provisio 82.8 1.3 2.9E-05 45.4 4.0 30 465-496 2-31 (317)
124 PRK07097 gluconate 5-dehydroge 82.8 2.1 4.5E-05 42.3 5.2 36 457-494 4-39 (265)
125 PRK08936 glucose-1-dehydrogena 82.6 1.9 4.1E-05 42.5 4.8 30 463-494 7-36 (261)
126 PLN00198 anthocyanidin reducta 82.6 1.5 3.4E-05 45.0 4.4 33 460-494 6-38 (338)
127 PRK07074 short chain dehydroge 82.4 2 4.3E-05 42.0 4.8 31 464-496 3-33 (257)
128 PRK09496 trkA potassium transp 82.4 2.9 6.3E-05 44.9 6.5 105 386-506 157-273 (453)
129 PRK05650 short chain dehydroge 82.2 1.9 4.2E-05 42.7 4.7 29 464-494 1-29 (270)
130 PRK12936 3-ketoacyl-(acyl-carr 82.2 1.7 3.8E-05 41.7 4.3 29 464-494 7-35 (245)
131 PRK05565 fabG 3-ketoacyl-(acyl 82.1 1.6 3.5E-05 41.9 4.1 30 464-495 6-35 (247)
132 PRK08416 7-alpha-hydroxysteroi 82.0 2 4.4E-05 42.4 4.8 30 464-495 9-38 (260)
133 PRK05875 short chain dehydroge 81.7 2.1 4.6E-05 42.4 4.8 32 463-496 7-38 (276)
134 PLN00141 Tic62-NAD(P)-related 81.7 2.3 5E-05 42.0 5.0 30 463-494 17-46 (251)
135 PRK12745 3-ketoacyl-(acyl-carr 81.7 1.8 4E-05 42.1 4.3 30 464-495 3-32 (256)
136 PRK06463 fabG 3-ketoacyl-(acyl 81.7 2.3 4.9E-05 41.7 5.0 29 464-494 8-36 (255)
137 PRK07069 short chain dehydroge 81.6 1.9 4.2E-05 41.7 4.4 29 466-496 2-30 (251)
138 PRK08226 short chain dehydroge 81.6 1.7 3.7E-05 42.7 4.0 32 464-497 7-38 (263)
139 TIGR03206 benzo_BadH 2-hydroxy 81.5 2.2 4.9E-05 41.2 4.8 30 464-495 4-33 (250)
140 PRK07035 short chain dehydroge 81.3 2.3 5E-05 41.4 4.8 31 464-496 9-39 (252)
141 PTZ00381 aldehyde dehydrogenas 81.3 1.2 2.7E-05 49.4 3.2 82 442-529 168-251 (493)
142 PRK12746 short chain dehydroge 81.2 2.3 5E-05 41.4 4.8 29 464-494 7-35 (254)
143 PRK05693 short chain dehydroge 81.2 2.4 5.3E-05 42.1 5.0 30 464-495 2-31 (274)
144 PRK08277 D-mannonate oxidoredu 81.1 2.3 5E-05 42.3 4.8 40 464-505 11-52 (278)
145 PRK07453 protochlorophyllide o 80.9 2.3 4.9E-05 43.7 4.8 41 464-506 7-49 (322)
146 PRK06114 short chain dehydroge 80.9 1.9 4.1E-05 42.3 4.1 31 463-495 8-38 (254)
147 PRK08628 short chain dehydroge 80.8 2 4.3E-05 42.0 4.2 31 463-495 7-37 (258)
148 PRK12938 acetyacetyl-CoA reduc 80.7 1.9 4E-05 41.8 3.9 29 464-494 4-32 (246)
149 PLN02662 cinnamyl-alcohol dehy 80.7 1.8 3.9E-05 43.8 3.9 29 464-494 5-33 (322)
150 PRK06171 sorbitol-6-phosphate 80.6 1.8 3.8E-05 42.7 3.8 30 464-495 10-39 (266)
151 PRK06181 short chain dehydroge 80.5 2.5 5.4E-05 41.5 4.8 31 464-496 2-32 (263)
152 PLN02695 GDP-D-mannose-3',5'-e 80.5 2 4.3E-05 45.5 4.3 35 460-496 18-52 (370)
153 PRK08594 enoyl-(acyl carrier p 80.3 2.7 5.9E-05 41.8 5.0 44 464-507 8-56 (257)
154 PRK06550 fabG 3-ketoacyl-(acyl 80.1 1.8 4E-05 41.6 3.6 32 464-497 6-37 (235)
155 PRK07666 fabG 3-ketoacyl-(acyl 80.1 2.7 5.8E-05 40.6 4.8 31 464-496 8-38 (239)
156 PLN02583 cinnamoyl-CoA reducta 80.1 2.3 5E-05 43.3 4.5 32 462-495 5-36 (297)
157 PRK06138 short chain dehydroge 80.0 2.6 5.5E-05 40.9 4.6 30 464-495 6-35 (252)
158 KOG1201 Hydroxysteroid 17-beta 80.0 1.5 3.4E-05 45.9 3.2 55 465-521 40-98 (300)
159 PF05368 NmrA: NmrA-like famil 79.9 2.3 5E-05 41.4 4.3 38 466-505 1-42 (233)
160 PRK08618 ornithine cyclodeamin 79.7 6.9 0.00015 41.0 8.0 97 407-506 62-171 (325)
161 PF02737 3HCDH_N: 3-hydroxyacy 79.7 3.3 7.2E-05 39.8 5.2 62 466-530 2-82 (180)
162 PRK08642 fabG 3-ketoacyl-(acyl 79.6 2.8 6E-05 40.7 4.7 29 464-494 6-34 (253)
163 PRK06141 ornithine cyclodeamin 79.6 7.2 0.00016 40.7 8.1 98 407-507 60-170 (314)
164 PRK06079 enoyl-(acyl carrier p 79.6 2.3 5E-05 42.0 4.2 33 464-496 8-40 (252)
165 TIGR01831 fabG_rel 3-oxoacyl-( 79.5 2 4.4E-05 41.4 3.7 28 466-495 1-28 (239)
166 PRK08690 enoyl-(acyl carrier p 79.5 2.2 4.9E-05 42.4 4.2 32 464-495 7-38 (261)
167 PRK07831 short chain dehydroge 79.5 2.7 5.8E-05 41.4 4.6 31 464-495 18-48 (262)
168 PRK06484 short chain dehydroge 79.3 2.8 6.2E-05 45.8 5.2 43 462-506 268-312 (520)
169 PRK06128 oxidoreductase; Provi 79.3 2.6 5.6E-05 42.8 4.6 29 464-494 56-84 (300)
170 PRK07424 bifunctional sterol d 79.2 2.1 4.5E-05 46.6 4.1 30 464-495 179-208 (406)
171 TIGR01830 3oxo_ACP_reduc 3-oxo 79.0 2.1 4.6E-05 40.9 3.7 29 466-496 1-29 (239)
172 TIGR02685 pter_reduc_Leis pter 78.9 2.6 5.7E-05 41.8 4.4 30 464-495 2-31 (267)
173 PRK07832 short chain dehydroge 78.9 3 6.5E-05 41.5 4.8 30 464-495 1-30 (272)
174 PLN02174 aldehyde dehydrogenas 78.8 1.7 3.6E-05 48.4 3.2 48 441-494 170-217 (484)
175 PRK06997 enoyl-(acyl carrier p 78.7 3.4 7.3E-05 41.2 5.1 32 464-495 7-38 (260)
176 PRK07370 enoyl-(acyl carrier p 78.7 3.1 6.8E-05 41.3 4.9 32 464-495 7-38 (258)
177 PLN02986 cinnamyl-alcohol dehy 78.5 2.2 4.7E-05 43.6 3.8 29 464-494 6-34 (322)
178 PRK07576 short chain dehydroge 78.5 3.1 6.8E-05 41.3 4.8 33 462-496 8-40 (264)
179 PRK06046 alanine dehydrogenase 78.5 8.4 0.00018 40.5 8.2 97 407-507 64-174 (326)
180 PRK12548 shikimate 5-dehydroge 78.5 2.4 5.2E-05 43.7 4.1 32 462-496 125-157 (289)
181 PRK07806 short chain dehydroge 78.5 2.6 5.7E-05 40.9 4.2 29 464-494 7-35 (248)
182 PRK12743 oxidoreductase; Provi 78.0 3.3 7.1E-05 40.7 4.8 29 464-494 3-31 (256)
183 PRK12935 acetoacetyl-CoA reduc 78.0 2.8 6.1E-05 40.6 4.2 29 464-494 7-35 (247)
184 PRK13394 3-hydroxybutyrate deh 77.9 3.3 7.1E-05 40.3 4.7 30 464-495 8-37 (262)
185 PRK08303 short chain dehydroge 77.9 2.4 5.3E-05 43.7 3.9 31 464-496 9-39 (305)
186 PRK12747 short chain dehydroge 77.7 2.9 6.4E-05 40.8 4.3 29 464-494 5-33 (252)
187 PRK09242 tropinone reductase; 77.7 3.4 7.5E-05 40.4 4.8 30 464-495 10-39 (257)
188 PRK07814 short chain dehydroge 77.6 3.4 7.5E-05 40.8 4.8 32 463-496 10-41 (263)
189 PRK12367 short chain dehydroge 77.5 2.5 5.5E-05 42.1 3.9 31 464-496 15-45 (245)
190 TIGR02415 23BDH acetoin reduct 77.4 3.6 7.8E-05 40.0 4.8 30 464-495 1-30 (254)
191 KOG1205 Predicted dehydrogenas 77.1 2.8 6E-05 43.7 4.1 41 464-506 13-55 (282)
192 PRK06172 short chain dehydroge 77.0 3.7 7.9E-05 40.0 4.8 30 464-495 8-37 (253)
193 PRK06113 7-alpha-hydroxysteroi 76.9 3.7 8.1E-05 40.2 4.8 31 463-495 11-41 (255)
194 PLN02650 dihydroflavonol-4-red 76.9 2.7 5.9E-05 43.5 4.0 31 462-494 4-34 (351)
195 PRK00258 aroE shikimate 5-dehy 76.8 3.7 8E-05 42.0 4.9 58 446-506 105-166 (278)
196 PRK06603 enoyl-(acyl carrier p 76.4 3 6.6E-05 41.4 4.0 32 464-495 9-40 (260)
197 PRK07340 ornithine cyclodeamin 76.3 8.5 0.00018 40.1 7.5 96 408-506 61-169 (304)
198 PRK07041 short chain dehydroge 76.3 3 6.4E-05 40.0 3.8 28 467-496 1-28 (230)
199 PRK07792 fabG 3-ketoacyl-(acyl 76.1 3.9 8.5E-05 41.9 4.8 32 462-495 11-42 (306)
200 COG0451 WcaG Nucleoside-diphos 76.0 2.9 6.2E-05 41.7 3.8 29 466-496 3-31 (314)
201 PLN02730 enoyl-[acyl-carrier-p 75.9 3.3 7.1E-05 43.2 4.3 40 463-503 9-50 (303)
202 PLN02657 3,8-divinyl protochlo 75.9 3.4 7.5E-05 44.2 4.6 40 456-497 53-92 (390)
203 COG1028 FabG Dehydrogenases wi 75.9 3.5 7.6E-05 40.0 4.3 31 462-494 4-34 (251)
204 PRK07530 3-hydroxybutyryl-CoA 75.8 4.2 9E-05 41.6 4.9 66 463-531 4-88 (292)
205 PRK06484 short chain dehydroge 75.7 3.5 7.6E-05 45.1 4.6 42 464-507 6-49 (520)
206 PRK09134 short chain dehydroge 75.6 4.2 9.2E-05 39.9 4.8 30 463-494 9-38 (258)
207 PRK06701 short chain dehydroge 75.6 3.4 7.3E-05 42.0 4.2 30 464-495 47-76 (290)
208 cd03514 CrtR_beta-carotene-hyd 75.6 23 0.0005 34.8 9.9 21 240-260 168-188 (207)
209 TIGR01289 LPOR light-dependent 75.5 4.1 8.9E-05 41.9 4.8 41 464-506 4-47 (314)
210 PRK08159 enoyl-(acyl carrier p 75.4 4.4 9.6E-05 40.8 5.0 32 464-495 11-42 (272)
211 PRK06732 phosphopantothenate-- 75.3 2.7 5.9E-05 42.0 3.4 29 467-496 19-47 (229)
212 PLN02686 cinnamoyl-CoA reducta 75.1 4.9 0.00011 42.5 5.4 32 461-494 51-82 (367)
213 PRK08219 short chain dehydroge 75.1 3.9 8.4E-05 38.8 4.2 30 464-496 4-33 (227)
214 PLN02896 cinnamyl-alcohol dehy 75.1 3.6 7.9E-05 42.7 4.4 31 462-494 9-39 (353)
215 PRK12827 short chain dehydroge 75.1 3.3 7.3E-05 39.8 3.8 29 464-494 7-35 (249)
216 PRK06720 hypothetical protein; 74.9 4.8 0.0001 38.3 4.8 32 463-496 16-47 (169)
217 PRK07533 enoyl-(acyl carrier p 74.9 5 0.00011 39.8 5.1 32 463-494 10-41 (258)
218 PRK06505 enoyl-(acyl carrier p 74.9 4.4 9.5E-05 40.8 4.8 32 464-495 8-39 (271)
219 PF01488 Shikimate_DH: Shikima 74.7 4.6 0.0001 36.8 4.4 43 462-507 11-56 (135)
220 PRK08217 fabG 3-ketoacyl-(acyl 74.7 4.8 0.0001 38.8 4.8 31 464-496 6-36 (253)
221 TIGR02114 coaB_strep phosphopa 74.5 3.1 6.6E-05 41.6 3.5 29 467-496 18-46 (227)
222 PLN02214 cinnamoyl-CoA reducta 74.4 3.4 7.3E-05 43.1 3.9 30 463-494 10-39 (342)
223 PRK08415 enoyl-(acyl carrier p 74.4 4.7 0.0001 40.7 4.9 32 464-495 6-37 (274)
224 PRK12744 short chain dehydroge 74.3 3.3 7.2E-05 40.6 3.7 29 464-494 9-37 (257)
225 PRK05579 bifunctional phosphop 74.2 3.4 7.3E-05 45.0 4.0 97 375-496 118-235 (399)
226 TIGR03466 HpnA hopanoid-associ 74.2 3.2 6.8E-05 41.8 3.6 30 465-496 2-31 (328)
227 PF01695 IstB_IS21: IstB-like 74.2 5.6 0.00012 38.2 5.1 43 464-506 48-93 (178)
228 PRK07201 short chain dehydroge 74.2 4.1 8.9E-05 45.9 4.8 40 464-505 372-413 (657)
229 cd01080 NAD_bind_m-THF_DH_Cycl 74.0 6.4 0.00014 37.8 5.4 41 451-494 30-73 (168)
230 KOG1200 Mitochondrial/plastidi 74.0 5 0.00011 40.3 4.7 45 463-509 14-60 (256)
231 PRK09009 C factor cell-cell si 73.7 3.6 7.7E-05 39.7 3.7 29 464-494 1-31 (235)
232 PRK09730 putative NAD(P)-bindi 73.6 4.4 9.5E-05 39.0 4.3 29 464-494 2-30 (247)
233 PRK06300 enoyl-(acyl carrier p 73.6 4.5 9.7E-05 42.0 4.6 34 462-495 7-40 (299)
234 PLN02545 3-hydroxybutyryl-CoA 73.6 4.9 0.00011 41.1 4.8 67 463-532 4-89 (295)
235 PRK07904 short chain dehydroge 73.5 4.6 0.0001 40.0 4.5 31 463-495 8-39 (253)
236 TIGR01829 AcAcCoA_reduct aceto 73.4 4.6 9.9E-05 38.7 4.3 31 464-496 1-31 (242)
237 cd07132 ALDH_F3AB Aldehyde deh 73.4 3.1 6.7E-05 45.5 3.5 83 442-530 159-243 (443)
238 COG0702 Predicted nucleoside-d 73.1 3.9 8.5E-05 39.9 3.8 28 465-494 2-29 (275)
239 PRK08278 short chain dehydroge 72.8 4.1 8.9E-05 40.7 4.0 31 464-496 7-37 (273)
240 PRK05599 hypothetical protein; 72.7 4.3 9.3E-05 39.9 4.0 40 465-507 2-43 (246)
241 KOG1610 Corticosteroid 11-beta 72.6 6.1 0.00013 41.9 5.2 59 460-520 26-87 (322)
242 PRK12748 3-ketoacyl-(acyl-carr 72.5 4.8 0.0001 39.4 4.3 33 464-496 6-38 (256)
243 PRK07984 enoyl-(acyl carrier p 72.4 6 0.00013 39.7 5.0 32 464-495 7-38 (262)
244 PRK07775 short chain dehydroge 72.4 5.6 0.00012 39.7 4.8 29 464-494 11-39 (274)
245 PRK06198 short chain dehydroge 72.4 3.9 8.4E-05 40.0 3.6 31 464-496 7-38 (260)
246 PRK13656 trans-2-enoyl-CoA red 72.4 4.6 0.0001 44.0 4.4 43 451-496 20-73 (398)
247 PRK06035 3-hydroxyacyl-CoA deh 72.3 6.5 0.00014 40.2 5.4 37 463-502 3-41 (291)
248 KOG0725 Reductases with broad 72.2 5.4 0.00012 40.9 4.7 30 463-494 8-37 (270)
249 cd07136 ALDH_YwdH-P39616 Bacil 72.1 3.1 6.8E-05 45.7 3.1 85 439-529 156-242 (449)
250 PRK11903 aldehyde dehydrogenas 72.1 3.3 7.1E-05 46.4 3.3 81 442-529 209-298 (521)
251 PRK06123 short chain dehydroge 72.0 6 0.00013 38.3 4.8 29 464-494 3-31 (248)
252 PLN02989 cinnamyl-alcohol dehy 71.9 4.2 9.1E-05 41.5 3.8 29 464-494 6-34 (325)
253 PLN02467 betaine aldehyde dehy 71.8 3.8 8.2E-05 45.7 3.7 85 441-529 210-296 (503)
254 PRK12859 3-ketoacyl-(acyl-carr 71.8 4.4 9.4E-05 40.0 3.8 33 463-495 6-38 (256)
255 PRK08293 3-hydroxybutyryl-CoA 71.8 6.8 0.00015 40.0 5.3 67 463-532 3-90 (287)
256 PRK09260 3-hydroxybutyryl-CoA 71.5 5.6 0.00012 40.6 4.6 40 464-506 2-43 (288)
257 PLN02766 coniferyl-aldehyde de 71.2 3.7 7.9E-05 45.7 3.5 85 441-529 217-304 (501)
258 TIGR01777 yfcH conserved hypot 71.0 3.5 7.5E-05 40.8 3.0 29 466-496 1-29 (292)
259 PRK07791 short chain dehydroge 71.0 6 0.00013 40.1 4.7 30 464-495 7-36 (286)
260 PRK07819 3-hydroxybutyryl-CoA 70.9 6.3 0.00014 40.6 4.9 67 462-531 4-89 (286)
261 cd07142 ALDH_F2BC Arabidosis a 70.8 4.4 9.4E-05 44.6 3.9 87 439-529 198-287 (476)
262 PRK10675 UDP-galactose-4-epime 70.4 4.8 0.0001 41.1 3.9 29 465-495 2-30 (338)
263 PLN02166 dTDP-glucose 4,6-dehy 70.2 5.2 0.00011 43.7 4.3 30 465-496 122-151 (436)
264 TIGR00507 aroE shikimate 5-deh 70.0 6.4 0.00014 40.0 4.7 57 446-505 100-158 (270)
265 PF01370 Epimerase: NAD depend 69.8 4.9 0.00011 38.3 3.6 27 466-494 1-27 (236)
266 TIGR01500 sepiapter_red sepiap 69.8 6.1 0.00013 38.9 4.4 29 465-495 2-34 (256)
267 TIGR02632 RhaD_aldol-ADH rhamn 69.1 6.2 0.00013 45.6 4.8 106 369-495 334-444 (676)
268 PF13561 adh_short_C2: Enoyl-( 69.1 5.9 0.00013 38.6 4.1 36 475-510 6-47 (241)
269 cd07134 ALDH_AlkH-like Pseudom 68.8 4 8.7E-05 44.4 3.1 82 442-529 159-242 (433)
270 TIGR02622 CDP_4_6_dhtase CDP-g 68.6 5.2 0.00011 41.5 3.8 31 464-496 5-35 (349)
271 cd07110 ALDH_F10_BADH Arabidop 68.5 4.9 0.00011 43.8 3.7 85 441-529 179-265 (456)
272 PRK15181 Vi polysaccharide bio 68.2 5.8 0.00012 41.3 4.0 30 464-495 16-45 (348)
273 TIGR01181 dTDP_gluc_dehyt dTDP 67.7 5.1 0.00011 40.0 3.3 30 465-496 1-32 (317)
274 PRK08261 fabG 3-ketoacyl-(acyl 67.7 26 0.00055 37.9 8.9 100 391-495 137-240 (450)
275 cd07559 ALDH_ACDHII_AcoD-like 67.7 4.9 0.00011 44.4 3.5 52 439-494 192-243 (480)
276 PRK11563 bifunctional aldehyde 67.7 3.9 8.5E-05 47.3 2.8 46 442-494 209-256 (675)
277 PF02254 TrkA_N: TrkA-N domain 67.5 10 0.00022 32.7 4.8 38 466-506 1-40 (116)
278 TIGR01179 galE UDP-glucose-4-e 67.2 5.6 0.00012 39.8 3.6 29 465-495 1-29 (328)
279 TIGR01214 rmlD dTDP-4-dehydror 67.0 6 0.00013 39.3 3.7 29 465-495 1-29 (287)
280 PLN02240 UDP-glucose 4-epimera 67.0 6.3 0.00014 40.5 3.9 31 464-496 6-36 (352)
281 TIGR03589 PseB UDP-N-acetylglu 66.9 8.2 0.00018 39.9 4.8 30 464-495 5-36 (324)
282 TIGR01746 Thioester-redct thio 66.9 5.8 0.00013 40.3 3.6 27 466-494 2-30 (367)
283 KOG1600 Fatty acid desaturase 66.8 5.3 0.00011 42.2 3.3 22 89-110 34-55 (321)
284 cd07119 ALDH_BADH-GbsA Bacillu 66.7 5.4 0.00012 43.9 3.6 85 441-529 193-279 (482)
285 PRK10217 dTDP-glucose 4,6-dehy 66.4 5.7 0.00012 41.0 3.5 29 464-494 2-30 (355)
286 cd07097 ALDH_KGSADH-YcbD Bacil 65.8 5.4 0.00012 43.8 3.4 84 442-530 195-281 (473)
287 cd00431 cysteine_hydrolases Cy 65.7 56 0.0012 29.8 9.6 99 392-494 22-140 (161)
288 PLN02572 UDP-sulfoquinovose sy 65.5 6.5 0.00014 43.0 3.9 30 464-495 48-77 (442)
289 PF02374 ArsA_ATPase: Anion-tr 65.4 6.5 0.00014 41.1 3.7 40 464-503 2-43 (305)
290 smart00822 PKS_KR This enzymat 65.2 6.9 0.00015 34.7 3.4 29 464-494 1-30 (180)
291 cd07128 ALDH_MaoC-N N-terminal 65.2 5.2 0.00011 44.8 3.2 82 442-530 205-295 (513)
292 PLN02653 GDP-mannose 4,6-dehyd 64.9 6.5 0.00014 40.5 3.6 30 464-495 7-36 (340)
293 TIGR02371 ala_DH_arch alanine 64.6 32 0.00069 36.2 8.7 98 407-507 63-173 (325)
294 PRK14106 murD UDP-N-acetylmura 64.5 7.9 0.00017 41.8 4.3 38 463-503 5-42 (450)
295 KOG1502 Flavonol reductase/cin 63.8 13 0.00028 39.7 5.6 31 462-494 5-35 (327)
296 PRK08309 short chain dehydroge 63.7 12 0.00027 35.9 5.0 39 465-506 2-42 (177)
297 TIGR01472 gmd GDP-mannose 4,6- 63.6 7.5 0.00016 40.1 3.8 29 464-494 1-29 (343)
298 PRK06199 ornithine cyclodeamin 63.6 27 0.0006 37.7 8.1 122 407-531 90-228 (379)
299 PF00857 Isochorismatase: Isoc 63.5 50 0.0011 30.5 9.0 102 389-494 19-142 (174)
300 PRK11241 gabD succinate-semial 63.2 7.1 0.00015 43.3 3.7 88 439-530 203-292 (482)
301 COG0169 AroE Shikimate 5-dehyd 63.0 9 0.00019 39.9 4.2 60 446-508 107-171 (283)
302 PRK10669 putative cation:proto 62.8 9.9 0.00021 42.7 4.8 43 460-505 413-458 (558)
303 cd07114 ALDH_DhaS Uncharacteri 62.6 7.9 0.00017 42.3 3.9 87 439-529 176-264 (457)
304 PF02423 OCD_Mu_crystall: Orni 62.6 12 0.00026 39.1 5.1 120 407-530 63-196 (313)
305 cd07115 ALDH_HMSADH_HapE Pseud 62.5 6.6 0.00014 42.8 3.2 84 442-529 177-262 (453)
306 cd01065 NAD_bind_Shikimate_DH 62.4 15 0.00033 33.2 5.2 42 461-505 17-61 (155)
307 TIGR01804 BADH glycine betaine 62.2 6.6 0.00014 43.0 3.2 50 441-494 192-241 (467)
308 cd07138 ALDH_CddD_SSP0762 Rhod 62.2 7.6 0.00016 42.6 3.6 65 462-529 209-275 (466)
309 PRK12377 putative replication 62.1 12 0.00026 38.2 4.8 51 455-505 93-146 (248)
310 cd07102 ALDH_EDX86601 Uncharac 62.1 7.9 0.00017 42.1 3.8 84 441-529 175-260 (452)
311 cd07101 ALDH_SSADH2_GabD2 Myco 61.8 6.9 0.00015 42.7 3.3 49 439-494 175-224 (454)
312 PLN00016 RNA-binding protein; 61.8 7.5 0.00016 41.0 3.4 34 461-496 50-87 (378)
313 PLN02778 3,5-epimerase/4-reduc 61.5 11 0.00023 38.8 4.4 34 459-494 4-38 (298)
314 PLN02419 methylmalonate-semial 61.3 6.7 0.00015 45.0 3.1 85 441-530 308-394 (604)
315 PRK05855 short chain dehydroge 61.3 13 0.00028 40.7 5.2 32 463-496 315-346 (582)
316 cd07131 ALDH_AldH-CAJ73105 Unc 61.2 7.7 0.00017 42.6 3.5 87 439-529 192-280 (478)
317 cd07129 ALDH_KGSADH Alpha-Keto 61.0 6.3 0.00014 43.2 2.8 49 441-494 170-221 (454)
318 PLN02206 UDP-glucuronate decar 61.0 9.7 0.00021 41.7 4.2 30 464-495 120-149 (442)
319 cd07113 ALDH_PADH_NahF Escheri 60.9 7 0.00015 43.0 3.1 84 441-529 201-286 (477)
320 TIGR02278 PaaN-DH phenylacetic 60.9 8.5 0.00018 44.5 3.9 49 439-494 202-252 (663)
321 PF00258 Flavodoxin_1: Flavodo 60.6 6.2 0.00013 35.5 2.2 34 468-503 6-39 (143)
322 PRK08939 primosomal protein Dn 60.5 13 0.00029 38.9 4.9 44 463-506 156-202 (306)
323 KOG4169 15-hydroxyprostaglandi 60.4 10 0.00023 38.8 4.0 29 464-494 6-34 (261)
324 cd07088 ALDH_LactADH-AldA Esch 60.4 8 0.00017 42.3 3.5 87 439-529 190-278 (468)
325 PRK06130 3-hydroxybutyryl-CoA 60.4 15 0.00032 37.8 5.2 40 463-505 4-45 (311)
326 PRK09987 dTDP-4-dehydrorhamnos 59.7 9.2 0.0002 39.0 3.5 27 465-494 2-28 (299)
327 PRK13252 betaine aldehyde dehy 59.7 8.1 0.00018 42.7 3.4 48 442-494 202-249 (488)
328 cd07086 ALDH_F7_AASADH-like NA 59.5 8.1 0.00018 42.6 3.3 83 442-529 197-281 (478)
329 TIGR02992 ectoine_eutC ectoine 59.3 30 0.00065 36.3 7.4 98 407-507 63-174 (326)
330 cd01075 NAD_bind_Leu_Phe_Val_D 59.3 16 0.00034 35.8 5.0 29 463-494 28-56 (200)
331 PF03807 F420_oxidored: NADP o 59.3 17 0.00036 30.4 4.5 39 467-508 3-47 (96)
332 PF00670 AdoHcyase_NAD: S-aden 59.2 15 0.00033 35.4 4.7 41 462-505 22-62 (162)
333 PRK08268 3-hydroxy-acyl-CoA de 59.2 13 0.00027 41.7 4.8 69 460-531 4-91 (507)
334 PRK13473 gamma-aminobutyraldeh 59.1 8.6 0.00019 42.2 3.4 49 442-494 197-245 (475)
335 PRK08181 transposase; Validate 58.9 7.9 0.00017 39.9 2.9 45 460-504 103-150 (269)
336 PF01210 NAD_Gly3P_dh_N: NAD-d 58.9 17 0.00037 33.9 4.9 38 466-506 2-41 (157)
337 PLN02427 UDP-apiose/xylose syn 58.8 12 0.00027 39.3 4.4 35 460-496 11-46 (386)
338 PRK07578 short chain dehydroge 58.8 10 0.00022 35.8 3.4 27 465-494 2-28 (199)
339 PRK05808 3-hydroxybutyryl-CoA 58.7 13 0.00028 37.7 4.5 66 464-532 4-88 (282)
340 PRK08727 hypothetical protein; 58.6 14 0.0003 36.8 4.5 37 464-500 42-80 (233)
341 COG3967 DltE Short-chain dehyd 58.4 17 0.00036 36.9 4.9 44 464-509 6-51 (245)
342 PRK06129 3-hydroxyacyl-CoA deh 58.2 18 0.00038 37.5 5.3 38 464-504 3-42 (308)
343 TIGR00521 coaBC_dfp phosphopan 58.2 11 0.00023 41.1 3.9 33 463-495 185-231 (390)
344 PLN02466 aldehyde dehydrogenas 58.2 8.4 0.00018 43.4 3.2 87 439-529 252-341 (538)
345 PRK07952 DNA replication prote 58.2 21 0.00045 36.3 5.7 50 456-505 92-144 (244)
346 KOG3011 Ubiquitin-conjugating 58.1 9.8 0.00021 39.1 3.3 136 128-271 109-260 (293)
347 PRK08291 ectoine utilization p 58.1 36 0.00078 35.8 7.7 97 407-507 66-177 (330)
348 cd03510 Rhizobitoxine-FADS-lik 58.1 33 0.00071 32.9 6.8 14 155-168 72-85 (175)
349 cd07090 ALDH_F9_TMBADH NAD+-de 57.9 8.8 0.00019 41.9 3.2 66 461-529 193-260 (457)
350 cd07130 ALDH_F7_AASADH NAD+-de 57.6 8.8 0.00019 42.3 3.2 66 461-529 213-280 (474)
351 cd03505 Delta9-FADS-like The D 57.5 35 0.00075 33.3 6.9 26 237-262 127-153 (178)
352 PF04321 RmlD_sub_bind: RmlD s 57.4 11 0.00023 38.7 3.5 32 465-498 2-33 (286)
353 PRK08324 short chain dehydroge 57.3 14 0.0003 42.7 4.8 40 464-505 423-464 (681)
354 cd07099 ALDH_DDALDH Methylomon 57.3 18 0.0004 39.3 5.6 47 442-494 179-225 (453)
355 PRK06835 DNA replication prote 57.1 16 0.00035 38.8 4.9 43 463-505 183-228 (329)
356 TIGR01915 npdG NADPH-dependent 57.1 16 0.00036 35.8 4.7 39 465-505 2-42 (219)
357 PRK03562 glutathione-regulated 56.9 14 0.0003 42.4 4.7 46 458-506 395-442 (621)
358 TIGR03240 arg_catab_astD succi 56.7 8.9 0.00019 42.4 3.0 65 462-529 210-277 (484)
359 cd07118 ALDH_SNDH Gluconobacte 56.6 11 0.00023 41.4 3.6 31 461-494 197-227 (454)
360 cd07104 ALDH_BenzADH-like ALDH 56.5 11 0.00024 40.5 3.7 87 439-529 156-244 (431)
361 PRK05642 DNA replication initi 56.4 16 0.00034 36.5 4.5 38 464-501 46-85 (234)
362 PRK07364 2-octaprenyl-6-methox 56.3 13 0.00027 39.4 4.0 44 449-496 2-48 (415)
363 PF01661 Macro: Macro domain; 56.2 49 0.0011 28.4 7.0 62 359-421 43-104 (118)
364 TIGR03374 ABALDH 1-pyrroline d 56.1 9.9 0.00021 42.0 3.3 31 461-494 214-244 (472)
365 cd07109 ALDH_AAS00426 Uncharac 55.9 11 0.00024 41.1 3.5 67 460-529 194-262 (454)
366 PRK11440 putative hydrolase; P 55.8 93 0.002 29.7 9.5 33 461-494 119-151 (188)
367 cd07085 ALDH_F6_MMSDH Methylma 55.7 9.4 0.0002 42.0 3.0 66 462-530 214-281 (478)
368 TIGR01809 Shik-DH-AROM shikima 55.2 19 0.00041 37.1 5.0 42 462-506 124-168 (282)
369 cd07087 ALDH_F3-13-14_CALDH-li 55.1 13 0.00028 40.4 3.9 82 442-529 159-242 (426)
370 cd07106 ALDH_AldA-AAD23400 Str 55.1 10 0.00023 41.2 3.2 83 442-529 173-257 (446)
371 PLN02203 aldehyde dehydrogenas 54.9 19 0.0004 40.2 5.2 48 441-494 166-213 (484)
372 PF08032 SpoU_sub_bind: RNA 2' 54.8 20 0.00043 28.9 4.1 69 446-519 3-71 (76)
373 cd07151 ALDH_HBenzADH NADP+-de 54.4 12 0.00025 41.2 3.4 31 461-494 209-239 (465)
374 cd07112 ALDH_GABALDH-PuuC Esch 54.3 12 0.00025 41.2 3.4 87 439-529 181-271 (462)
375 cd07105 ALDH_SaliADH Salicylal 54.2 12 0.00027 40.5 3.6 68 460-530 178-247 (432)
376 cd07089 ALDH_CddD-AldA-like Rh 54.1 11 0.00024 41.3 3.2 87 439-529 180-268 (459)
377 cd07100 ALDH_SSADH1_GabD1 Myco 54.1 11 0.00024 40.8 3.2 66 461-529 173-240 (429)
378 cd07108 ALDH_MGR_2402 Magnetos 54.0 24 0.00052 38.5 5.8 50 441-494 175-224 (457)
379 PRK12549 shikimate 5-dehydroge 53.9 17 0.00038 37.5 4.5 40 463-505 127-169 (284)
380 cd07103 ALDH_F5_SSADH_GabD Mit 53.9 11 0.00025 40.8 3.3 50 441-494 176-225 (451)
381 cd03512 Alkane-hydroxylase Alk 53.9 1.6E+02 0.0035 31.0 11.7 24 239-262 256-279 (314)
382 PRK07066 3-hydroxybutyryl-CoA 53.5 19 0.00041 38.1 4.7 68 461-531 5-88 (321)
383 TIGR02437 FadB fatty oxidation 53.3 18 0.00039 42.3 4.9 70 459-531 309-397 (714)
384 PLN00015 protochlorophyllide r 52.8 15 0.00033 37.5 3.9 38 467-506 1-41 (308)
385 PRK07417 arogenate dehydrogena 52.7 27 0.00059 35.5 5.6 38 465-505 2-41 (279)
386 PRK00066 ldh L-lactate dehydro 52.5 26 0.00057 36.7 5.6 65 464-532 7-79 (315)
387 PRK06719 precorrin-2 dehydroge 52.4 20 0.00043 33.9 4.2 41 462-505 12-52 (157)
388 KOG1371 UDP-glucose 4-epimeras 52.4 14 0.00031 39.5 3.5 42 463-506 2-46 (343)
389 cd07137 ALDH_F3FHI Plant aldeh 52.0 11 0.00023 41.2 2.7 50 439-494 157-206 (432)
390 PF03853 YjeF_N: YjeF-related 51.9 21 0.00045 34.0 4.3 41 454-494 15-57 (169)
391 cd07083 ALDH_P5CDH ALDH subfam 51.8 11 0.00025 41.7 2.9 84 442-530 214-306 (500)
392 cd07133 ALDH_CALDH_CalB Conife 51.7 16 0.00034 39.9 3.9 82 442-529 160-243 (434)
393 TIGR01237 D1pyr5carbox2 delta- 51.6 12 0.00026 41.7 3.0 67 461-530 245-319 (511)
394 PRK11150 rfaD ADP-L-glycero-D- 51.3 14 0.00031 37.3 3.3 27 466-494 2-28 (308)
395 cd07124 ALDH_PutA-P5CDH-RocA D 51.1 14 0.00031 41.1 3.6 50 441-494 225-280 (512)
396 COG0003 ArsA Predicted ATPase 50.9 16 0.00036 38.7 3.8 41 463-503 2-44 (322)
397 PLN02520 bifunctional 3-dehydr 50.7 21 0.00047 40.2 4.9 41 463-506 379-421 (529)
398 PRK09407 gabD2 succinic semial 50.6 14 0.0003 41.4 3.3 82 441-529 213-297 (524)
399 TIGR02441 fa_ox_alpha_mit fatt 50.4 19 0.00041 42.3 4.5 69 460-531 332-419 (737)
400 PRK09496 trkA potassium transp 50.4 22 0.00048 38.2 4.8 38 465-505 2-41 (453)
401 PRK08125 bifunctional UDP-gluc 50.4 17 0.00037 41.7 4.1 41 454-496 302-347 (660)
402 cd07121 ALDH_EutE Ethanolamine 50.3 12 0.00027 40.8 2.9 61 462-529 180-242 (429)
403 PF08643 DUF1776: Fungal famil 50.3 21 0.00045 37.7 4.4 42 465-507 5-48 (299)
404 PLN02220 delta-9 acyl-lipid de 50.1 97 0.0021 32.7 9.2 26 237-262 234-260 (299)
405 PRK03692 putative UDP-N-acetyl 50.1 31 0.00067 35.2 5.5 66 440-508 83-154 (243)
406 PLN02434 fatty acid hydroxylas 49.1 31 0.00067 35.3 5.2 41 127-167 165-208 (237)
407 PRK13968 putative succinate se 49.1 17 0.00037 40.0 3.7 65 462-529 204-270 (462)
408 cd07084 ALDH_KGSADH-like ALDH 49.0 11 0.00024 41.2 2.3 47 441-494 160-206 (442)
409 COG1090 Predicted nucleoside-d 48.9 15 0.00032 38.6 2.9 30 466-497 1-30 (297)
410 PRK06823 ornithine cyclodeamin 48.8 76 0.0016 33.4 8.3 96 407-506 62-172 (315)
411 TIGR02279 PaaC-3OHAcCoADH 3-hy 48.6 22 0.00049 39.8 4.6 66 463-531 5-89 (503)
412 cd01012 YcaC_related YcaC rela 48.6 63 0.0014 29.9 6.9 92 393-494 19-118 (157)
413 KOG1207 Diacetyl reductase/L-x 48.2 23 0.0005 35.2 4.0 45 464-510 8-54 (245)
414 cd07152 ALDH_BenzADH NAD-depen 48.2 17 0.00036 39.6 3.4 31 461-494 188-218 (443)
415 PF04127 DFP: DNA / pantothena 48.1 18 0.00039 35.3 3.3 27 467-494 22-48 (185)
416 PRK12749 quinate/shikimate deh 48.0 25 0.00054 36.5 4.5 90 383-494 63-153 (288)
417 cd06534 ALDH-SF NAD(P)+-depend 47.9 18 0.00039 38.0 3.5 85 437-528 148-236 (367)
418 PRK09620 hypothetical protein; 47.9 19 0.00041 36.2 3.5 20 475-494 29-48 (229)
419 COG3320 Putative dehydrogenase 47.7 27 0.00059 38.0 4.8 43 464-508 1-49 (382)
420 cd07150 ALDH_VaniDH_like Pseud 47.7 17 0.00036 39.6 3.3 66 461-529 197-264 (451)
421 PRK10084 dTDP-glucose 4,6 dehy 47.5 17 0.00037 37.4 3.2 28 465-494 2-29 (352)
422 PRK08116 hypothetical protein; 47.4 28 0.00061 35.6 4.8 41 465-505 116-159 (268)
423 PRK11199 tyrA bifunctional cho 47.3 22 0.00048 38.1 4.2 42 456-499 91-132 (374)
424 cd05286 QOR2 Quinone oxidoredu 46.9 66 0.0014 31.4 7.2 43 458-503 133-177 (320)
425 cd05188 MDR Medium chain reduc 46.9 90 0.002 29.9 8.0 40 462-504 134-175 (271)
426 KOG1209 1-Acyl dihydroxyaceton 46.9 24 0.00052 36.1 4.0 34 461-495 5-38 (289)
427 PRK06921 hypothetical protein; 46.7 34 0.00074 35.0 5.2 44 462-505 116-163 (266)
428 cd07135 ALDH_F14-YMR110C Sacch 46.7 20 0.00044 39.1 3.8 84 439-529 164-250 (436)
429 cd07145 ALDH_LactADH_F420-Bios 46.7 34 0.00074 37.4 5.5 49 442-494 183-231 (456)
430 TIGR02299 HpaE 5-carboxymethyl 46.3 18 0.00039 39.9 3.4 31 461-494 213-243 (488)
431 PRK11730 fadB multifunctional 46.2 27 0.00059 40.8 5.0 68 461-531 311-397 (715)
432 PRK02472 murD UDP-N-acetylmura 46.2 20 0.00044 38.6 3.7 29 464-495 6-34 (447)
433 cd03508 Delta4-sphingolipid-FA 46.1 1.8E+02 0.004 30.3 10.6 20 237-256 221-240 (289)
434 PF06057 VirJ: Bacterial virul 46.1 25 0.00054 34.9 3.9 69 462-531 2-72 (192)
435 PRK06940 short chain dehydroge 45.9 31 0.00068 34.6 4.8 28 464-495 3-30 (275)
436 cd05292 LDH_2 A subgroup of L- 45.7 40 0.00087 35.1 5.6 64 465-532 2-73 (308)
437 PRK06526 transposase; Provisio 45.6 21 0.00046 36.3 3.5 31 464-494 99-131 (254)
438 cd03522 MoeA_like MoeA_like. T 45.6 31 0.00067 36.5 4.8 80 409-507 125-212 (312)
439 cd08241 QOR1 Quinone oxidoredu 45.6 66 0.0014 31.6 7.0 40 463-504 140-181 (323)
440 PRK06407 ornithine cyclodeamin 45.4 80 0.0017 33.0 7.8 92 407-507 60-162 (301)
441 PF03446 NAD_binding_2: NAD bi 45.3 39 0.00085 31.5 5.0 40 464-506 2-43 (163)
442 cd07098 ALDH_F15-22 Aldehyde d 45.0 20 0.00043 39.2 3.4 48 442-494 184-231 (465)
443 TIGR01780 SSADH succinate-semi 45.0 18 0.0004 39.4 3.1 66 461-529 196-263 (448)
444 TIGR00715 precor6x_red precorr 44.5 21 0.00045 36.6 3.3 27 465-494 2-28 (256)
445 PRK06718 precorrin-2 dehydroge 44.5 22 0.00048 34.9 3.3 41 462-505 9-49 (202)
446 PRK13508 tagatose-6-phosphate 44.4 29 0.00063 35.4 4.3 96 399-509 203-306 (309)
447 PRK14175 bifunctional 5,10-met 44.1 37 0.0008 35.6 5.0 43 450-494 140-187 (286)
448 cd07116 ALDH_ACDHII-AcoD Ralst 43.8 43 0.00093 37.0 5.8 50 441-494 194-243 (479)
449 cd07092 ALDH_ABALDH-YdcW Esche 43.7 21 0.00046 38.8 3.3 65 462-529 196-262 (450)
450 PRK15398 aldehyde dehydrogenas 43.5 20 0.00044 39.7 3.2 61 462-529 212-274 (465)
451 COG4693 PchG Oxidoreductase (N 43.3 13 0.00029 39.0 1.6 60 457-517 58-122 (361)
452 PRK00141 murD UDP-N-acetylmura 43.3 29 0.00062 38.3 4.4 38 456-496 7-45 (473)
453 PRK12320 hypothetical protein; 43.2 25 0.00054 41.2 4.0 30 465-496 2-31 (699)
454 cd06215 FNR_iron_sulfur_bindin 43.1 45 0.00098 32.2 5.3 52 435-491 158-222 (231)
455 PRK14027 quinate/shikimate deh 43.0 49 0.0011 34.3 5.8 41 463-506 127-170 (283)
456 PF02606 LpxK: Tetraacyldisacc 42.3 21 0.00046 37.8 3.1 26 469-497 48-73 (326)
457 PF02558 ApbA: Ketopantoate re 42.0 47 0.001 30.0 4.9 38 466-506 1-39 (151)
458 COG4869 PduL Propanediol utili 41.9 37 0.0008 33.3 4.2 57 475-531 8-71 (210)
459 PRK00676 hemA glutamyl-tRNA re 41.7 33 0.00072 36.7 4.4 35 457-494 167-203 (338)
460 PF00171 Aldedh: Aldehyde dehy 41.6 15 0.00033 40.1 1.9 87 439-529 183-271 (462)
461 TIGR00682 lpxK tetraacyldisacc 41.5 27 0.00058 36.9 3.6 52 398-497 15-66 (311)
462 PF03808 Glyco_tran_WecB: Glyc 41.3 24 0.00052 33.6 2.9 64 443-509 29-99 (172)
463 cd07117 ALDH_StaphAldA1 Unchar 41.3 47 0.001 36.8 5.6 48 442-494 195-243 (475)
464 cd08289 MDR_yhfp_like Yhfp put 41.3 49 0.0011 33.2 5.4 42 462-505 146-189 (326)
465 PF03721 UDPG_MGDP_dh_N: UDP-g 40.9 46 0.00099 32.2 4.9 38 466-506 3-42 (185)
466 TIGR01763 MalateDH_bact malate 40.7 52 0.0011 34.4 5.6 65 465-532 3-75 (305)
467 cd05291 HicDH_like L-2-hydroxy 40.6 47 0.001 34.4 5.2 65 465-532 2-74 (306)
468 cd07093 ALDH_F8_HMSADH Human a 40.3 47 0.001 36.2 5.4 50 441-494 176-225 (455)
469 PF00056 Ldh_1_N: lactate/mala 40.0 74 0.0016 29.3 5.9 66 465-532 2-75 (141)
470 PLN02260 probable rhamnose bio 39.8 31 0.00068 39.4 4.1 33 463-497 6-40 (668)
471 PF01583 APS_kinase: Adenylyls 39.4 43 0.00094 31.9 4.3 36 466-501 5-42 (156)
472 cd07143 ALDH_AldA_AN0554 Asper 39.3 30 0.00066 38.3 3.8 50 441-494 203-253 (481)
473 cd00550 ArsA_ATPase Oxyanion-t 39.1 28 0.0006 35.2 3.2 38 466-503 3-42 (254)
474 TIGR00658 orni_carb_tr ornithi 39.0 87 0.0019 32.9 6.9 94 406-501 61-184 (304)
475 COG4170 SapD ABC-type antimicr 38.8 28 0.0006 35.6 3.0 81 436-527 15-101 (330)
476 cd03506 Delta6-FADS-like The D 38.7 1.3E+02 0.0029 29.1 7.8 14 155-168 50-63 (204)
477 cd07125 ALDH_PutA-P5CDH Delta( 38.7 27 0.00057 39.1 3.2 85 441-529 226-315 (518)
478 PRK11908 NAD-dependent epimera 38.7 45 0.00098 34.5 4.7 30 464-495 2-32 (347)
479 cd08345 Fosfomycin_RP Fosfomyc 38.6 62 0.0013 27.0 4.8 47 397-448 66-112 (113)
480 TIGR01238 D1pyr5carbox3 delta- 38.6 55 0.0012 36.6 5.6 52 439-494 217-271 (500)
481 TIGR02197 heptose_epim ADP-L-g 38.6 26 0.00057 35.1 2.9 27 466-494 1-28 (314)
482 PRK09183 transposase/IS protei 38.6 45 0.00098 33.9 4.6 33 464-496 103-137 (259)
483 cd02034 CooC The accessory pro 38.6 48 0.001 29.6 4.3 40 466-506 2-43 (116)
484 TIGR01722 MMSDH methylmalonic 38.4 30 0.00065 38.1 3.6 48 442-494 196-243 (477)
485 COG0132 BioD Dethiobiotin synt 38.4 36 0.00078 34.4 3.8 32 463-494 2-36 (223)
486 cd06216 FNR_iron_sulfur_bindin 38.3 50 0.0011 32.5 4.8 61 435-500 177-243 (243)
487 COG0275 Predicted S-adenosylme 38.1 11 0.00025 39.7 0.2 95 413-513 101-199 (314)
488 PRK13982 bifunctional SbtC-lik 38.0 29 0.00062 38.9 3.3 23 473-495 280-302 (475)
489 PRK10090 aldehyde dehydrogenas 37.9 29 0.00064 37.6 3.4 31 461-494 149-179 (409)
490 PLN02315 aldehyde dehydrogenas 37.9 23 0.00051 39.6 2.6 30 462-494 236-265 (508)
491 cd07140 ALDH_F1L_FTFDH 10-form 37.9 35 0.00075 38.0 3.9 87 439-529 204-293 (486)
492 PF01113 DapB_N: Dihydrodipico 37.9 41 0.00089 30.2 3.8 28 465-494 2-30 (124)
493 PRK09406 gabD1 succinic semial 37.8 28 0.00061 38.2 3.2 30 462-494 201-230 (457)
494 PRK03659 glutathione-regulated 37.4 43 0.00093 38.3 4.7 41 462-505 399-441 (601)
495 PLN02278 succinic semialdehyde 37.2 32 0.00069 38.3 3.5 66 461-529 238-305 (498)
496 cd07095 ALDH_SGSD_AstD N-succi 37.2 22 0.00049 38.7 2.3 30 462-494 175-205 (431)
497 cd01336 MDH_cytoplasmic_cytoso 37.2 35 0.00076 36.0 3.7 65 465-532 4-84 (325)
498 PRK13912 nuclease NucT; Provis 37.0 1.3E+02 0.0029 28.6 7.3 101 397-505 59-165 (177)
499 cd01015 CSHase N-carbamoylsarc 37.0 3.6E+02 0.0078 25.4 10.2 33 461-494 112-144 (179)
500 PRK08773 2-octaprenyl-3-methyl 36.8 42 0.0009 35.3 4.2 35 461-498 4-38 (392)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=3.9e-168 Score=1350.30 Aligned_cols=509 Identities=73% Similarity=1.266 Sum_probs=488.9
Q ss_pred CCCCCCCCCCCCCCCCCCcceeehHHHHHHHHHHhhhcccccCCcceeehHHHHHHHHHHHhHHHHhhcchhhHhcCcCC
Q 009511 1 MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIV 80 (533)
Q Consensus 1 m~~~~~~l~~wpw~~lg~~ky~~~~p~~~~~~~~~~~~~~~~~~~~~~~il~~~llRy~~~~~wi~~~~~~~~~~k~KIq 80 (533)
||++||+||+|||++||||||++|||+|++++|++.++++++.|+.|+++|+++++|++++|+|++++|++++++|+||+
T Consensus 1 ma~~pg~lt~wpW~~lG~~Ky~~~~p~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~l~~q~W~s~sr~~~~~~~~ri~ 80 (620)
T PLN02869 1 MASKPGILTDWPWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRIV 80 (620)
T ss_pred CCCCCcccccCcccccCCeeeeeehHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhceeee
Confidence 99999999999999999999999999999999999999877788889999999999999999999999999999999999
Q ss_pred CCCcccccchhhhcchhhHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccc
Q 009511 81 DKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYH 160 (533)
Q Consensus 81 ~~~~~~~qvdrE~~~~n~iil~~ll~~l~~~~~p~~~~~lP~W~~~g~i~~lll~~lv~Df~~Yw~HRllH~~~LY~r~H 160 (533)
+|+++|+|+|||++||||+|+++++++++++.+| ..+.+|.|+..|++..+++|+++.|++|||+||++|++++||++|
T Consensus 81 ~~~i~f~QvDre~~wDd~iil~~l~~~~~~~~~p-~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~H 159 (620)
T PLN02869 81 DKGIEFEQVDRERNWDDQILFNGILFYVGYMILP-GASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYH 159 (620)
T ss_pred ccCCCceeeccccccchHHHHHHHHHHHHHHhhh-hhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 9999999999999999999999999999998999 789999999999999999999999999999999999999999999
Q ss_pred cCCccCccCCcchhhccchhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcccccceeccccchhccCCcc
Q 009511 161 SHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 240 (533)
Q Consensus 161 kvHHss~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~~~~yli~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk 240 (533)
++||++.+|+|+|+..+++.|.+.+.+++.+|+++..+.+..|+.++++|+++.+++++++|||+|++|+++++.+|+++
T Consensus 160 kvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLk 239 (620)
T PLN02869 160 SHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLK 239 (620)
T ss_pred hhccCCCCCCchhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcch
Confidence 99999999999998854445777777778889987777777789999999999999999999999999999988889999
Q ss_pred cccCCchhhhHhhhcCCCCccCccchhhhhcCCCCCCChhHHHHhhcCCCccccccCCCCCeEEecccCCccccccccch
Q 009511 241 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIG 320 (533)
Q Consensus 241 ~li~Tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~~~~~~e~~~~g~~~~~~~~~~~pd~V~L~h~~~~~s~~h~~~~ 320 (533)
|+++||++|++||+++++|||++|++|||+|||+++++++++|+...+.+ ++||||||||+||++|+||+|||
T Consensus 240 yll~TPsfHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~~~~-------~~pd~V~l~H~t~~~s~~h~~~~ 312 (620)
T PLN02869 240 YLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLKRPE-------EIPDVVHLTHLTTPDSIYHLRLG 312 (620)
T ss_pred heecCchHHhHHhccCCcCcccchHHHHhccCCCCCCchhHHHHhhcCcc-------cCCCEEEEeccCCHHHhhccchH
Confidence 99999999999999999999999999999999999999999999887645 79999999999999999999999
Q ss_pred hhhhccCCCcccccccchhhhhhhhhHHHHHHHHHHHhcceeEeeccccCcccceeEEeeccCceeccchhhhHhHHHHH
Q 009511 321 FASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIE 400 (533)
Q Consensus 321 ~~s~as~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~ie 400 (533)
|||+||+||+ + +||||||||+| +++|+++|+|||||++|+|+|||+++|||+||||||||++|+++|+||++||
T Consensus 313 ~~s~as~p~~--~---~~~l~~~wp~~-~~~m~~~w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie 386 (620)
T PLN02869 313 FASLASKPYI--S---KWYLRLMWPVT-SWSMMLTWIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIE 386 (620)
T ss_pred HHHhccCCcc--c---hhHHHHHHHHH-HHHHHHHHHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHH
Confidence 9999999999 7 99999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEEecccccccccccccceeeccCCCCceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHH
Q 009511 401 EAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 480 (533)
Q Consensus 401 ~ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p~~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~a 480 (533)
+||+||||+||||+|||+|||||+|||||||||+||| +|||||||||||||||||||||+|||||||||++ ||||||
T Consensus 387 ~ail~ad~~Gvkv~sLg~LNk~~~LN~~G~l~v~k~p-~L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~--sK~~ra 463 (620)
T PLN02869 387 EAILEADKRGVKVLSLGLLNQGEELNRYGELYIHRNP-KLKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNL--SKVAYF 463 (620)
T ss_pred HHHHHHHhcCCEEEechhcchhhhhcCCceEeeecCC-CcceEEEeCCchHHHHHHHhcCCCCceEEEecCc--cHHHHH
Confidence 9999999999999999999999999999999999999 9999999999999999999999999999999999 799999
Q ss_pred HHHHhhhcCcEEEeechhHHHHHhccCCh-hhcccceecccccccCceeeE
Q 009511 481 VASSLCQMGIKVATICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHKTVTMV 530 (533)
Q Consensus 481 ia~~lc~~~~~v~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~ 530 (533)
||+|||||||||+++|+|||++||+|+|+ |+|+||+||||| +||+-
T Consensus 464 ia~~lc~r~i~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~k~w 510 (620)
T PLN02869 464 IASALCQRGIQVATFREDEYEKLNKKLPNTECGSKLLLSKNY----SEKIW 510 (620)
T ss_pred HHHHHHhcCCeEeecCHHHHHHHHHhccchhhhhhEEEeecc----CceeE
Confidence 99999999999766999999999999999 899999999999 78753
No 2
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-33 Score=282.84 Aligned_cols=213 Identities=19% Similarity=0.244 Sum_probs=171.1
Q ss_pred HHHHHHHHHHhHHHHhh--cchhhHhcCcCCCCCcccccchhhhcch-----hhHHHHHHHHHHHHHhcCC----CCCCC
Q 009511 52 PFLLLRMLHDQIWISLS--RYRTAKRNNRIVDKAIEFDQVDRERNWD-----DQIVFNGLIFYIVRMLIPP----SYSNL 120 (533)
Q Consensus 52 ~~~llRy~~~~~wi~~~--~~~~~~~k~KIq~~~~~~~qvdrE~~~~-----n~iil~~ll~~l~~~~~p~----~~~~l 120 (533)
...+.-++.+..|+.++ +.++++||||||+++.+ ..++.++|. ||++++.++..+.+...+. ....+
T Consensus 37 ~~~~~y~l~~lpf~~iD~t~~~~~~~rYKIQp~k~~--s~~~~~kc~k~vl~n~~~v~~p~~~~~y~~~~~~~~~~~~pl 114 (283)
T KOG0873|consen 37 VHELVYWLFCLPFIFIDVTNRPPFLRRYKIQPKKNP--SLSKQLKCLKVVLLNHFLVVLPLTLVSYPFVEWFGLPSGAPL 114 (283)
T ss_pred HHHHHHHHhcchheEeecccCcchhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHhHHHHHHhCCCcCCCC
Confidence 33344444456666544 46889999999998764 455566654 7777777666665544321 22446
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccCCccCccCCcchhhccchhhHHHHHHHHHHHHHHHHHhh
Q 009511 121 RFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLK 200 (533)
Q Consensus 121 P~W~~~g~i~~lll~~lv~Df~~Yw~HRllH~~~LY~r~HkvHHss~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg 200 (533)
|.|.+ ++.+++++++++|+.+||.||++|++++|+.+||+||++.+|.+.+|.|+||+|+++.++. |+++..+++
T Consensus 115 Pt~~~--~l~~l~i~~liEd~~fY~~HRL~H~~~~Yk~iHKvHHe~taPf~~sa~YaHp~E~~~lg~~---~~~~p~~~~ 189 (283)
T KOG0873|consen 115 PSWKE--MLAQLVVFFLIEDIGFYWSHRLFHHKWLYKYIHKVHHEYTAPFGLSAEYAHPLEHLFLGLG---TVMGPALLC 189 (283)
T ss_pred CcHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhhhhcccCchhHhhhhcCHHHHHHcCCh---hhhhhHHhh
Confidence 77765 8999999999999999999999999999999999999999999999999999999988763 333333344
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccceeccccchhccCCcccccCCchhhhHhhhcCCCCccCccchhhhhcCCCCCC
Q 009511 201 NASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRS 277 (533)
Q Consensus 201 ~~s~~~~~~yli~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~ 277 (533)
. |+.+.++|+++..+.++..||||++ |+++.+.+|+. .+.++||+||..+.+||+..|+.||||+||+...
T Consensus 190 ~-H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pfy----~ga~~HD~HH~~f~~n~~~~f~~~D~i~GTd~~~ 260 (283)
T KOG0873|consen 190 G-HVITLWIWIALRILETVESHSGYDF-PWSLSKLIPFY----GGAEHHDYHHLVFIGNFASVFGYLDRIHGTDSTY 260 (283)
T ss_pred h-HHHHHHHHHHHHHHHHhhccCCCCC-CccccccCccc----CCCcccchhhhhccccccchhHHHHHHhccCccH
Confidence 3 9999999999999999999999997 99998888873 5799999999999999999999999999999753
No 3
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.95 E-value=1.4e-27 Score=241.43 Aligned_cols=155 Identities=26% Similarity=0.434 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccCCccCccCCcchhhccchhhHHHHHHHHHHHHHHHHHhhhhHHHH
Q 009511 127 GVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIAS 206 (533)
Q Consensus 127 g~i~~lll~~lv~Df~~Yw~HRllH~~~LY~r~HkvHHss~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~ 206 (533)
.+++++++.+++.|+.+||.||++|+.++||++|++||++++|+++|+.+.||+|.++......+|+.++ + .+..+
T Consensus 94 ~~~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~---~-~~~~~ 169 (271)
T COG3000 94 PFALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLL---G-LSPVA 169 (271)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHh---c-CCHHH
Confidence 3577788888899999999999999999999999999999999999999999999999877666666543 3 46677
Q ss_pred HHHHHHHHHHHhhcccccceeccccchhccCCcccccCCchhhhHhhhcC--CCCccCccchhhhhcCCCCCCChhHHHH
Q 009511 207 FVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEK 284 (533)
Q Consensus 207 ~~~yli~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~~~--~~NYG~~f~~WDrLFGT~~~~~~~~~e~ 284 (533)
+..+.++..+...++|||++. | .. .++++.++.||++|++||+++ ++|||.++++|||+|||+.++.++..++
T Consensus 170 ~~~~~~~~~~~~~~~H~~~~~-~-~~---~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~ 244 (271)
T COG3000 170 VALLFIFLLFWAVLIHSNLDL-P-LP---LGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDK 244 (271)
T ss_pred HHHHHHHHHHHHHHHhcCccc-c-CC---cccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCccc
Confidence 777778888999999999996 4 22 356666789999999999997 4999999999999999999998887777
Q ss_pred hhcCCC
Q 009511 285 SLKRSG 290 (533)
Q Consensus 285 ~~~g~~ 290 (533)
++.+.+
T Consensus 245 ~~~~~~ 250 (271)
T COG3000 245 IGVKAK 250 (271)
T ss_pred cccccc
Confidence 664434
No 4
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.88 E-value=1.1e-22 Score=202.19 Aligned_cols=143 Identities=20% Similarity=0.375 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhhhccccCCccCccCCcchhhccchhhHHHHHHHHHHHHHHHHHhhhhHHHH
Q 009511 127 GVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIAS 206 (533)
Q Consensus 127 g~i~~lll~~lv~Df~~Yw~HRllH~~~LY~r~HkvHHss~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~ 206 (533)
..++.+++++++.||.+||.||.+|++.+||+.|+.||.+...+|+++.++||++.+++++ |-.+..+..+.|..+
T Consensus 127 ~~~~~i~~flfF~Df~iYw~HR~lH~~~vy~~LH~~HH~~~~~tpfAslafhpidg~lqai----p~~I~~Fi~Plh~~t 202 (312)
T KOG0872|consen 127 LLFVSIFLFLFFTDFGIYWAHRELHHRGVYKRLHKPHHIWNICTPFASLAFHPIDGFLQAI----PYHIYPFIFPLHKVT 202 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcchhhhhhccCchhhhhcCcchhHhhhc----hhHheeeeecchHHH
Confidence 3677777788899999999999999999999999999999999999999999999988763 444333333446666
Q ss_pred HHHHHHHHHHHhhcccccceeccccchhccCCcccccCCchhhhHhhhcCCCCccCccchhhhhcCCCCCCChhHHH
Q 009511 207 FVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYE 283 (533)
Q Consensus 207 ~~~yli~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~~~~~~e 283 (533)
.++...+..+++++.|.|.-. -+.+.++||.+|..||..++.|||.++++|||+|||+..+.++.++
T Consensus 203 ~L~l~~f~~iwt~~IHd~~~~----------~l~~~ingaahHtvHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d 269 (312)
T KOG0872|consen 203 YLSLFTFVNIWTISIHDGIYG----------SLNPPINGAAHHTVHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFD 269 (312)
T ss_pred HHHHHHHHHhHheeeeccccc----------cccCccccccccceeeeeEecCCCcEEEeHHhccCcccCccccccc
Confidence 666666778889999988642 1234578999999999999999999999999999999988776555
No 5
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.84 E-value=3.7e-22 Score=193.32 Aligned_cols=145 Identities=21% Similarity=0.356 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-hhhhhhccccCCccCccCCcchhhccchhhHHHHHHH-HHHHHHHHHHhhhhHHH
Q 009511 128 VILTILVHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIA 205 (533)
Q Consensus 128 ~i~~lll~~lv~Df~~Yw~HRllH-~~~LY~r~HkvHHss~~p~~~ta~~~hplE~ll~~~l-~~iPll~~~llg~~s~~ 205 (533)
...+++..+++.|.|.|++||.|| .+.+|+.+|++||+-.+|.+..|.|.||+|.++...+ .++..+. .|. +.-
T Consensus 122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~gla~l~---sgl-spr 197 (287)
T KOG0874|consen 122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGGLAFLL---SGL-SPR 197 (287)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhchHHHHHH---cCC-Ccc
Confidence 356778888999999999999999 5889999999999999999999999999999988764 2222221 222 222
Q ss_pred HHHHHHHHHHHHhhcccccceeccccchhccCCcccccCCchhhhHhhhc--CCCCcc-CccchhhhhcCCCCCCChhHH
Q 009511 206 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYS-LFMPIYDYIYGTIDRSSDSVY 282 (533)
Q Consensus 206 ~~~~yli~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~~--~~~NYG-~~f~~WDrLFGT~~~~~~~~~ 282 (533)
+...+..+.+.-++.+|||+-+ |..+++.+ +-+.+.+||+||+. .+.||+ .+|++||+++||+.+.+.|..
T Consensus 198 ~aiifFtfaTiKTVDDHCGy~l-P~dpfqm~-----F~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~ 271 (287)
T KOG0874|consen 198 TAIIFFTFATIKTVDDHCGYWL-PGDPFQMF-----FPNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR 271 (287)
T ss_pred ceEEEEEeeeeeeecccccccc-CCCceeEe-----ccCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence 2223333445667889999975 88776653 23679999999998 689998 689999999999998765543
No 6
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=99.76 E-value=3.8e-19 Score=165.80 Aligned_cols=56 Identities=50% Similarity=0.752 Sum_probs=54.9
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEeechhHHHHHhccCChhhcccceecccccc
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 523 (533)
|||+|++ ||||||||+|||||||||+|+|+|||++||+|+|+|+|+||+|||+|++
T Consensus 1 V~L~G~~--sKvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~~~ 56 (164)
T PF12076_consen 1 VFLTGNT--SKVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSYQA 56 (164)
T ss_pred Ceecccc--cHHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCCCc
Confidence 7999999 7999999999999999999999999999999999999999999999987
No 7
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.71 E-value=1.3e-17 Score=144.95 Aligned_cols=111 Identities=29% Similarity=0.480 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHhhc-hhhhhhccccCCccCccCCcchhhccchhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 009511 134 VHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYII 212 (533)
Q Consensus 134 l~~lv~Df~~Yw~HRllH-~~~LY~r~HkvHHss~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~~~~yli 212 (533)
+.+++.|+++||+||++| .+++| ++|+.||+.++|+++++.+.+|+|.++...+ ++++..+.+..+..++.++.+
T Consensus 3 ~~~l~~d~~~Y~~HRl~H~~~~l~-~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (114)
T PF04116_consen 3 LGFLLWDFWEYWMHRLLHKIPFLW-RIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA 78 (114)
T ss_pred eeHHHHHHHHHHHHHHHhcCchHH-HHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence 456788999999999999 55555 9999999999999999999999999987654 333333344556777778888
Q ss_pred HHHHHhhcccccceeccccchhccCCcccccCCchhhhHhhh
Q 009511 213 YVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT 254 (533)
Q Consensus 213 ~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~ 254 (533)
+..+.+.++|||+.. + ..+..+++..+|++|+.||+
T Consensus 79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~ 114 (114)
T PF04116_consen 79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS 114 (114)
T ss_pred HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence 888999999999921 1 12456777899999999995
No 8
>PLN02434 fatty acid hydroxylase
Probab=99.19 E-value=3.7e-10 Score=112.85 Aligned_cols=134 Identities=21% Similarity=0.308 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hchh-------hhhhccccCCccCccCCcchhhccchhhHHHHHHHHHHHHHHHHHh
Q 009511 128 VILTILVHMGPVEFLYYWFHRA-LHHH-------YLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199 (533)
Q Consensus 128 ~i~~lll~~lv~Df~~Yw~HRl-lH~~-------~LY~r~HkvHHss~~p~~~ta~~~hplE~ll~~~l~~iPll~~~ll 199 (533)
.+..+++.+++.-+.+|.+||. +|.. .+....|..||.. |.......++|.-.++....+..++.. ++
T Consensus 83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~--P~D~~rLv~PP~~~~~l~~~~~~l~~~--~~ 158 (237)
T PLN02434 83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKH--PMDGLRLVFPPAATAILCVPFWNLIAL--FA 158 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcC--CCCCCCeecCcHHHHHHHHHHHHHHHH--Hc
Confidence 4556677888999999999998 6852 2334679999965 444444567777655444332211111 11
Q ss_pred h-----hhHHHHHHHHHHHHHHHhhcccccceeccccchhccCCcccccCCchhhhHhhhc-CCCCccCccchhhhhcCC
Q 009511 200 K-----NASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGT 273 (533)
Q Consensus 200 g-----~~s~~~~~~yli~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT 273 (533)
+ ..-.+.+.+|++| +..+...|.+ + |.. ++++. --++|..||.+ .+.|||.+.++||++|||
T Consensus 159 ~~~~a~~~~~G~l~gYl~Y-d~~Hy~lH~~-~--p~~-----~~~r~---lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT 226 (237)
T PLN02434 159 TPATAPALFGGGLLGYVMY-DCTHYFLHHG-Q--PST-----DVLRN---LKKYHLNHHFRDQDKGFGITSSLWDRVFGT 226 (237)
T ss_pred chhHHHHHHHHHHHHHHHH-HHHHHHHHhc-C--cch-----HHHHH---HHHHHHHHcCCCCCCCCCcCchHHHHhcCC
Confidence 1 0112334566654 5667777764 2 321 23332 37899999987 599999999999999999
Q ss_pred CCCC
Q 009511 274 IDRS 277 (533)
Q Consensus 274 ~~~~ 277 (533)
..++
T Consensus 227 ~~~~ 230 (237)
T PLN02434 227 LPPS 230 (237)
T ss_pred CCCc
Confidence 9554
No 9
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.26 E-value=5.8e-06 Score=87.12 Aligned_cols=176 Identities=15% Similarity=0.189 Sum_probs=114.6
Q ss_pred eEEecccCCcccccc--ccchhhhhccCCCcccccccchhhhhhhhhHHHHHHHHHHHhcceeEeeccccCcc---ccee
Q 009511 302 VVHLTHLTTPESIYH--LRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKL---KLQT 376 (533)
Q Consensus 302 ~V~L~h~~~~~s~~h--~~~~~~s~as~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~~ 376 (533)
|.|+.|.++.+..=+ ..++|+ .|. |-. +..|....+|++++-+.+-- ..+-
T Consensus 2 f~fi~H~~~~~~~~~~~~~~~~~-----~~~--------------~~~-----l~~~~~~~p~~~~~~~v~S~~g~~~eg 57 (340)
T PRK14982 2 FGLIGHLTSLEHAQRVARELGYD-----EYA--------------DQD-----LDFWCSAPPQLVDHIEVTSATGQTIEG 57 (340)
T ss_pred EEEEeccCCHHHhHHHHhcCCcc-----ccC--------------hHh-----HHHHhhCCCeEeeeEEEEeCCCCEEEE
Confidence 789999999987442 223221 121 222 11244456888887776544 3466
Q ss_pred EEe--eccCceeccchhhhHhHHHHHHHHHHHHhcCCeEEEecccccccccccccceeec-cCCCCcee---EEeeCCcc
Q 009511 377 WVV--PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLE-RQPNKLKI---KVVDGSSL 450 (533)
Q Consensus 377 w~~--pr~~~~y~~~~~~~~in~~ie~ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~-~~p~~l~v---rvv~g~~l 450 (533)
|.| |--+=|- ...+.+..=+.|.+|+..|++.|++|..||....--. +++.+-++ +-+ ++.+ ++-+|||+
T Consensus 58 ~~i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~tsiv~--~~~~~~~~~~~r-~i~ie~~~~TtGNs~ 133 (340)
T PRK14982 58 KYIESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSSIIF--ENFNLLQHKQVR-NTTLEWERFTTGNTH 133 (340)
T ss_pred EEEeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHHHhc--CCcccccccccc-cceeccccccCCchh
Confidence 776 3333233 3223344446788899999999999999999876543 22333332 334 6677 79999999
Q ss_pred hhhhhhhcCCc---------CcceEEEeccccchhhHHHHHHHhhhc-Cc-EEEee--chhHHHHHhccC
Q 009511 451 AAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQM-GI-KVATI--CKDDYEKLKLRI 507 (533)
Q Consensus 451 ~aa~v~~~ip~---------~~~~v~l~g~~~~~k~~~aia~~lc~~-~~-~v~~~--~~~~~~~~~~~~ 507 (533)
||++....+.. .-+.|++||++ +.+|+.+|..|+++ |+ ++++. +.++-+.++.+.
T Consensus 134 T~~ll~~~V~la~~~lg~~l~~k~VLVtGAt--G~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el 201 (340)
T PRK14982 134 TAYVICRQVEQNAPRLGIDLSKATVAVVGAT--GDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL 201 (340)
T ss_pred HHHHHHHHHHHhHHHhccCcCCCEEEEEccC--hHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence 99998866531 34789999999 69999999999854 65 66663 345666666654
No 10
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=97.97 E-value=2.1e-05 Score=77.28 Aligned_cols=137 Identities=20% Similarity=0.293 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-hchhh---hh------hccccCCccCccCCcchhhccchhhHHHHHHHHHHHHHHHH-
Q 009511 129 ILTILVHMGPVEFLYYWFHRA-LHHHY---LY------SRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM- 197 (533)
Q Consensus 129 i~~lll~~lv~Df~~Yw~HRl-lH~~~---LY------~r~HkvHHss~~p~~~ta~~~hplE~ll~~~l~~iPll~~~- 197 (533)
...+++.++...+.+|-+||+ +|.++ =| --+|..||.- |..-.-..++|.-..+....+..++-.+.
T Consensus 84 ~~~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hfl~HGcHHk~--P~D~~RLVfPP~~~~il~~pfy~~~~~vl~ 161 (240)
T KOG0539|consen 84 SGLFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHFLIHGCHHKL--PMDGYRLVFPPTPFAILAAPFYLILSLVLP 161 (240)
T ss_pred hHHHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHHHHhcccccC--CCCCceEecCCchHHHHHHHHHHHHHHhcC
Confidence 334556677899999999998 57541 11 1369999975 34444557788776665543333322110
Q ss_pred -Hhh-hhHHHHHHHHHHHHHHHhhcccccceeccccchhccCCcccccCCchhhhHhhhc-CCCCccCccchhhhhcCCC
Q 009511 198 -VLK-NASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTI 274 (533)
Q Consensus 198 -llg-~~s~~~~~~yli~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT~ 274 (533)
..+ ..-.+.+++|+.|- ..+..-|-|- .|+. |.++ .--.+|.-||-+ .+.-||....+||++|||.
T Consensus 162 ~~~~~a~faG~l~GYV~YD-mtHYyLHhg~--p~~~-----~~~~---~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl 230 (240)
T KOG0539|consen 162 HPVAPAGFAGGLLGYVCYD-MTHYYLHHGS--PPKR-----PYLK---HLKKYHLNHHFKHQDLGFGITSSLWDYVFGTL 230 (240)
T ss_pred cchhhhhhccchhhhhhhh-hhhhhhhcCC--CCCc-----hHHH---HHHHHHhhhhhhccccCccccHHHHHHHhccC
Confidence 000 11123466788764 4444445432 1221 2232 236799999987 7999999999999999999
Q ss_pred CCCC
Q 009511 275 DRSS 278 (533)
Q Consensus 275 ~~~~ 278 (533)
-+..
T Consensus 231 ~~~~ 234 (240)
T KOG0539|consen 231 GPLK 234 (240)
T ss_pred CCCc
Confidence 7654
No 11
>PLN02601 beta-carotene hydroxylase
Probab=97.56 E-value=0.00063 Score=69.26 Aligned_cols=132 Identities=20% Similarity=0.271 Sum_probs=70.4
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hchhhhhhccccCCccCccCCcchhhccchhhHHHHHHHHHHHHHHH
Q 009511 118 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRA-LHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTT 196 (533)
Q Consensus 118 ~~lP~W~~~g~i~~lll~~lv~Df~~Yw~HRl-lH~~~LY~r~HkvHHss~~p~~~ta~~~hplE~ll~~~l~~iPll~~ 196 (533)
..+|.-...+.+..++..++..|++-.|.||. ||. +.|..|+-||+...- ++. ..+. ..+++++|.+.+
T Consensus 126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG--~LW~lH~sHH~Pr~g-~FE--~NDl-----FaVifAvpAIaL 195 (303)
T PLN02601 126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD--SLWNMHESHHKPREG-AFE--LNDV-----FAIVNAVPAIGL 195 (303)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cchhhhhhcCCCCCC-Ccc--cccc-----hhhhhHHHHHHH
Confidence 45564332333444555667789999999998 676 358899999987642 221 1111 111222333322
Q ss_pred HHhhhhH-----------HHHHHHHH-HHHHHHhhcccccceeccccchhccCCcccccCCchhhhHhhhc--CCCCccC
Q 009511 197 MVLKNAS-----------IASFVGYI-IYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL 262 (533)
Q Consensus 197 ~llg~~s-----------~~~~~~yl-i~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~~--~~~NYG~ 262 (533)
+..|..+ -..+.+|. +|+.+...+.|--+.+ .....-|+++. -...|.+||+. ...+||.
T Consensus 196 ~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHDgLVHqRfp~---~~~a~~~Y~rr---l~~AHklHHa~Ke~Gv~FGf 269 (303)
T PLN02601 196 LYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPV---GPIANVPYLRK---VAAAHQLHHTDKFKGVPYGL 269 (303)
T ss_pred HHHhhccccccHHHHHHHHHhHHHHHHHHHHHhhhhhcccccc---CCCCCCHHHHH---HHHHHHhhccCCcCCccceE
Confidence 2222210 01122232 2455556667754332 22222355554 37899999983 5789998
Q ss_pred ccc
Q 009511 263 FMP 265 (533)
Q Consensus 263 ~f~ 265 (533)
++.
T Consensus 270 ll~ 272 (303)
T PLN02601 270 FLG 272 (303)
T ss_pred Eec
Confidence 643
No 12
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.04 E-value=0.0022 Score=69.36 Aligned_cols=135 Identities=17% Similarity=0.188 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHhhchhhhhhccccCCccCccCCcc---------hhhccchhhHHHHHHHHHHHHHHHH-Hhhh------
Q 009511 138 PVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPI---------TSVIHPFAEHIVYFLLFAIPLVTTM-VLKN------ 201 (533)
Q Consensus 138 v~Df~~Yw~HRllH~~~LY~r~HkvHHss~~p~~~---------ta~~~hplE~ll~~~l~~iPll~~~-llg~------ 201 (533)
..|..+=.+|-+.|......|.|..||.+..++-. +..|+.|.|+++..++..+|-.+.. ....
T Consensus 18 ~~~~~~d~~h~~~h~~~~l~~~h~~hh~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (406)
T PRK07424 18 WVEIVRDSYHALAHQWNPLYRLHNWHHRVFRPDLSVVSEEIYRKAHWYNDVPEALVMLLFGTLPVLLLQQWNVPYGWLAW 97 (406)
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHhHHhhcCCcCCcccHHHHhhhhhhcCCHHHHHHHHHhhHHHHHHhhhcccccchhh
Confidence 34444445566666544556899999999887742 2468899997766544233322211 1000
Q ss_pred hHHHHHHHHH---HHHHHHhhccc-cccee--ccccchhccCCcccccCCchhhhHhhhcCC-CCccCccchhhhhcCCC
Q 009511 202 ASIASFVGYI---IYVDFMNNMGH-CNFEF--IPMWLFTVFPPLKFLMYTPSYHSLHHTQFR-TNYSLFMPIYDYIYGTI 274 (533)
Q Consensus 202 ~s~~~~~~yl---i~~~~~~~~~H-sg~e~--~P~~~~~~lp~Lk~li~Tp~~H~lHH~~~~-~NYG~~f~~WDrLFGT~ 274 (533)
.+......|+ +... ..+... ++-|. .|..+. . ++-.| +..+.||-.||-..+ .-||.++++.|+..||.
T Consensus 98 ~~~~~~~~~~~~~~~r~-~~~~~~~~~~d~~h~~~~~~-~-~~~~~-~v~~~~h~rh~~~~~~~~~~~~~~~~d~~~~ta 173 (406)
T PRK07424 98 LGVLYTLTFLFGAIARG-LGLPNADELTDLTHLPGPFE-T-LPSQW-FVNRPYHWRHHFDNQNAYYCGTFTLVDKLMGTA 173 (406)
T ss_pred hhhHHHHHHHHHHHHHh-cccccccccccccCCCCccc-C-CCccC-eecCceeEEEEeccccceeeeeEEEeehhcCcc
Confidence 0011111122 1111 111112 11111 133221 1 22234 567899999998865 77899999999999997
Q ss_pred CC
Q 009511 275 DR 276 (533)
Q Consensus 275 ~~ 276 (533)
..
T Consensus 174 ~s 175 (406)
T PRK07424 174 LS 175 (406)
T ss_pred cC
Confidence 53
No 13
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.05 E-value=0.019 Score=55.03 Aligned_cols=49 Identities=24% Similarity=0.312 Sum_probs=40.5
Q ss_pred eCCcchhhhhhhcCCcC---------cceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 446 DGSSLAAAVVVNSLPKT---------TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 446 ~g~~l~aa~v~~~ip~~---------~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.||++|||+.+.-+.+. -+.|++.|++ +.+|+++|..|+++|.+|.+.+
T Consensus 2 ~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgt--G~iG~~~a~~l~~~g~~V~l~~ 59 (194)
T cd01078 2 NGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGT--GPVGQRAAVLLAREGARVVLVG 59 (194)
T ss_pred CCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCC--CHHHHHHHHHHHHCCCEEEEEc
Confidence 59999999876655432 3689999998 5999999999999999998844
No 14
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=94.16 E-value=0.083 Score=51.38 Aligned_cols=57 Identities=18% Similarity=0.344 Sum_probs=40.0
Q ss_pred HHHhhcccccceeccccchhccCCcccccCCchhhhHhhhc-CCCCccCccchhhhhcCCC
Q 009511 215 DFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTI 274 (533)
Q Consensus 215 ~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT~ 274 (533)
....-+.|.... .|.+. +.+-- .-++.+|++|..||.. .++|||...++||.+....
T Consensus 99 nq~HkWsH~~~~-~P~~V-~~LQ~-~gillsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~~ 156 (178)
T PF10520_consen 99 NQFHKWSHTYKS-LPPWV-RFLQD-AGILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDKI 156 (178)
T ss_pred HHHHHHHcCCCC-CCHHH-HHHHH-CCcccCchhhhccccCcccCCeEeecccchHHHHHh
Confidence 344567888655 46541 11110 1246789999999999 8999999999999887654
No 15
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=93.48 E-value=0.099 Score=53.18 Aligned_cols=44 Identities=25% Similarity=0.319 Sum_probs=40.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccCCh
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~~~ 509 (533)
|=|++|||+ |=+|.|+|..|++.|.+|++ =++||-+.|+.|.++
T Consensus 7 kv~lITGAS--SGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~ 52 (246)
T COG4221 7 KVALITGAS--SGIGEATARALAEAGAKVVLAARREERLEALADEIGA 52 (246)
T ss_pred cEEEEecCc--chHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence 568999999 69999999999999999999 677889999999776
No 16
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=92.34 E-value=0.13 Score=53.95 Aligned_cols=46 Identities=20% Similarity=0.341 Sum_probs=38.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhccCChhh
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLRIPVEA 511 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~~~~~~~ 511 (533)
+=...||+| +++|+|.|.-|||||.+|..+ ++|+-+.+++|+-++.
T Consensus 50 ~WAVVTGaT--DGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~ 97 (312)
T KOG1014|consen 50 SWAVVTGAT--DGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY 97 (312)
T ss_pred CEEEEECCC--CcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 456899999 699999999999999999984 4578888888864443
No 17
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=92.23 E-value=0.63 Score=48.36 Aligned_cols=100 Identities=21% Similarity=0.170 Sum_probs=69.8
Q ss_pred hhhhHhHHHHHHHHHHHHhcCCeEEEecccccccccccccceeec-cCCCCceeEEeeCCcchhhhhhhcCCc-------
Q 009511 390 WRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLE-RQPNKLKIKVVDGSSLAAAVVVNSLPK------- 461 (533)
Q Consensus 390 ~~~~~in~~ie~ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~-~~p~~l~vrvv~g~~l~aa~v~~~ip~------- 461 (533)
++-+++-+-+-+|+.-|++.|+.|.+||..-- .=++=+-.++ +.|.---+|+-.|||+||-++..++=+
T Consensus 87 s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e~t~~~~ttgns~Tayaa~r~Vl~~~~~lGi 163 (351)
T COG5322 87 SRPKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVELTFTRFTTGNSHTAYAACRQVLKHFAQLGI 163 (351)
T ss_pred hCHHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceEEEEEecccCCccchHHHHHHHHHHHHHhCc
Confidence 34566777777888899999999999996531 1111111111 444122367889999999998877733
Q ss_pred --CcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 462 --TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 462 --~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.-.+|=.+|++ .-+|.+||..|.-++-+..|
T Consensus 164 dlsqatvaivGa~--G~Ia~~Iar~la~~~~~~~l 196 (351)
T COG5322 164 DLSQATVAIVGAT--GDIASAIARWLAPKVGVKEL 196 (351)
T ss_pred CHHHCeEEEecCC--chHHHHHHHHhccccCEEEE
Confidence 22379999999 69999999999966555555
No 18
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=91.80 E-value=0.3 Score=55.36 Aligned_cols=59 Identities=20% Similarity=0.495 Sum_probs=46.0
Q ss_pred ccCCCCceeEEee------CCcchhhhhhhcCCc-----CcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 434 ERQPNKLKIKVVD------GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 434 ~~~p~~l~vrvv~------g~~l~aa~v~~~ip~-----~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+|||+.-+.|..| |.+...+....-+|+ +-+-|++||++ +.+|++++..|+++|.+|..
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKvVLVTGAT--GgIG~aLAr~LLk~G~~Vva 109 (576)
T PLN03209 40 SKHPHSRKLRSLDIKAQASGATKFSSAAIEAIPKELDTKDEDLAFVAGAT--GKVGSRTVRELLKLGFRVRA 109 (576)
T ss_pred ccCcccccccccchhhccccchhhhhhhhhccccccccCCCCEEEEECCC--CHHHHHHHHHHHHCCCeEEE
Confidence 3677656666654 555556677777885 33579999999 69999999999999999987
No 19
>PRK06482 short chain dehydrogenase; Provisional
Probab=91.76 E-value=0.26 Score=48.96 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=33.3
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhccC
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLRI 507 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~~~ 507 (533)
+|.|++||++ +-+|+++|..|+++|.+|..+ +.++-+.++.+.
T Consensus 2 ~k~vlVtGas--g~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~ 46 (276)
T PRK06482 2 SKTWFITGAS--SGFGRGMTERLLARGDRVAATVRRPDALDDLKARY 46 (276)
T ss_pred CCEEEEecCC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 3679999999 699999999999999999883 334445554443
No 20
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=91.36 E-value=0.25 Score=50.86 Aligned_cols=49 Identities=16% Similarity=0.248 Sum_probs=41.0
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccCChhh
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA 511 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~~~~~ 511 (533)
..-+-++.|||+ |.+|+++|..|.+||..|+. =++|+-+.|++|.-.+.
T Consensus 4 ~~~~~~lITGAS--sGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~ 54 (265)
T COG0300 4 MKGKTALITGAS--SGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT 54 (265)
T ss_pred CCCcEEEEECCC--chHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh
Confidence 345678999999 69999999999999999999 56788888888855444
No 21
>PRK08265 short chain dehydrogenase; Provisional
Probab=90.53 E-value=0.37 Score=47.74 Aligned_cols=41 Identities=22% Similarity=0.305 Sum_probs=32.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~~ 506 (533)
|.|++||++ +-+|+++|..|+++|.+|++++ .++-+++.++
T Consensus 7 k~vlItGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 49 (261)
T PRK08265 7 KVAIVTGGA--TLIGAAVARALVAAGARVAIVDIDADNGAAVAAS 49 (261)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 679999999 6999999999999999999843 3344555444
No 22
>PRK06196 oxidoreductase; Provisional
Probab=90.35 E-value=0.5 Score=48.40 Aligned_cols=41 Identities=17% Similarity=0.212 Sum_probs=33.8
Q ss_pred hhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 452 AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 452 aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.-++|.++-.-|.|++||++ +-+|+++|..|.++|.+|++
T Consensus 15 ~~~~~~~~~l~~k~vlITGas--ggIG~~~a~~L~~~G~~Vv~ 55 (315)
T PRK06196 15 AEEVLAGHDLSGKTAIVTGGY--SGLGLETTRALAQAGAHVIV 55 (315)
T ss_pred HHHHhcCCCCCCCEEEEeCCC--chHHHHHHHHHHHCCCEEEE
Confidence 344456655445789999999 69999999999999999998
No 23
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=90.35 E-value=0.36 Score=46.85 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=29.2
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
-|.|++||++ +-+|+++|..|+++|.+|+++++
T Consensus 5 ~k~vlItGas--~gIG~~ia~~l~~~G~~vi~~~r 37 (248)
T TIGR01832 5 GKVALVTGAN--TGLGQGIAVGLAEAGADIVGAGR 37 (248)
T ss_pred CCEEEEECCC--chHHHHHHHHHHHCCCEEEEEcC
Confidence 3679999999 68999999999999999998444
No 24
>PRK05867 short chain dehydrogenase; Provisional
Probab=90.08 E-value=0.48 Score=46.42 Aligned_cols=43 Identities=26% Similarity=0.301 Sum_probs=33.6
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
.-|-|++||++ +=+|+++|..|.++|.+|++ .+.++-+++..+
T Consensus 8 ~~k~vlVtGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (253)
T PRK05867 8 HGKRALITGAS--TGIGKRVALAYVEAGAQVAIAARHLDALEKLADE 52 (253)
T ss_pred CCCEEEEECCC--chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 34779999999 69999999999999999998 344444444433
No 25
>PRK06924 short chain dehydrogenase; Provisional
Probab=89.72 E-value=0.34 Score=47.16 Aligned_cols=31 Identities=29% Similarity=0.469 Sum_probs=28.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|.|++||++ +-+|++||..|+++|.+|++++
T Consensus 2 k~vlItGas--ggiG~~ia~~l~~~g~~V~~~~ 32 (251)
T PRK06924 2 RYVIITGTS--QGLGEAIANQLLEKGTHVISIS 32 (251)
T ss_pred cEEEEecCC--chHHHHHHHHHHhcCCEEEEEe
Confidence 579999999 6999999999999999998833
No 26
>PRK09186 flagellin modification protein A; Provisional
Probab=89.58 E-value=0.49 Score=46.10 Aligned_cols=38 Identities=18% Similarity=0.303 Sum_probs=31.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHH
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKL 503 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~ 503 (533)
|.|++||++ +-+|+++|..|+++|.+|+++ +.++-+++
T Consensus 5 k~vlItGas--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~ 44 (256)
T PRK09186 5 KTILITGAG--GLIGSALVKAILEAGGIVIAADIDKEALNEL 44 (256)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEEEecChHHHHHH
Confidence 679999999 699999999999999999983 33444433
No 27
>PRK06949 short chain dehydrogenase; Provisional
Probab=89.34 E-value=0.64 Score=45.31 Aligned_cols=44 Identities=20% Similarity=0.238 Sum_probs=34.7
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
..-+.|++||++ +=+|+++|..|+++|.+|+. -+.++-+.++.+
T Consensus 7 ~~~k~ilItGas--g~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~ 52 (258)
T PRK06949 7 LEGKVALVTGAS--SGLGARFAQVLAQAGAKVVLASRRVERLKELRAE 52 (258)
T ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 344789999999 69999999999999999988 344555555443
No 28
>PRK07890 short chain dehydrogenase; Provisional
Probab=89.13 E-value=0.53 Score=45.88 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=27.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.||+||++ +=||+++|..|+++|.+|+++
T Consensus 6 k~vlItGa~--~~IG~~la~~l~~~G~~V~~~ 35 (258)
T PRK07890 6 KVVVVSGVG--PGLGRTLAVRAARAGADVVLA 35 (258)
T ss_pred CEEEEECCC--CcHHHHHHHHHHHcCCEEEEE
Confidence 579999999 699999999999999999983
No 29
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.12 E-value=0.56 Score=44.87 Aligned_cols=29 Identities=24% Similarity=0.379 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +.+|+++|..|+++|.+|++
T Consensus 7 ~~vlItGas--g~iG~~l~~~l~~~g~~v~~ 35 (249)
T PRK12825 7 RVALVTGAA--RGLGRAIALRLARAGADVVV 35 (249)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCeEEE
Confidence 579999999 69999999999999999876
No 30
>PRK08264 short chain dehydrogenase; Validated
Probab=89.12 E-value=0.41 Score=46.21 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCc-EEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~-~v~~~~ 496 (533)
+.|++||++ +.+|+++|..|+++|. +|+++.
T Consensus 7 ~~vlItGgs--g~iG~~la~~l~~~G~~~V~~~~ 38 (238)
T PRK08264 7 KVVLVTGAN--RGIGRAFVEQLLARGAAKVYAAA 38 (238)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCcccEEEEe
Confidence 579999999 6999999999999999 888843
No 31
>PRK07577 short chain dehydrogenase; Provisional
Probab=89.09 E-value=0.4 Score=46.01 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=28.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
|.|++||++ +-+|+++|..|+++|.+|+.+++
T Consensus 4 k~vlItG~s--~~iG~~ia~~l~~~G~~v~~~~r 35 (234)
T PRK07577 4 RTVLVTGAT--KGIGLALSLRLANLGHQVIGIAR 35 (234)
T ss_pred CEEEEECCC--CcHHHHHHHHHHHCCCEEEEEeC
Confidence 579999999 69999999999999999988433
No 32
>PRK05993 short chain dehydrogenase; Provisional
Probab=89.07 E-value=0.59 Score=46.79 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=31.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHh
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLK 504 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~ 504 (533)
|.|++||++ +-+|+++|..|+++|.+|+.+ +.+.-+.++
T Consensus 5 k~vlItGas--ggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~ 45 (277)
T PRK05993 5 RSILITGCS--SGIGAYCARALQSDGWRVFATCRKEEDVAALE 45 (277)
T ss_pred CEEEEeCCC--cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 579999999 699999999999999999983 334444443
No 33
>PLN02780 ketoreductase/ oxidoreductase
Probab=89.04 E-value=0.52 Score=48.98 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=33.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
+-|++||++ +-+|+++|..|+++|.+|++ -++|+-+.+.++
T Consensus 54 ~~~lITGAs--~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~ 96 (320)
T PLN02780 54 SWALVTGPT--DGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS 96 (320)
T ss_pred CEEEEeCCC--cHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Confidence 568999999 69999999999999999998 345555555444
No 34
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.04 E-value=0.48 Score=49.80 Aligned_cols=43 Identities=19% Similarity=0.211 Sum_probs=36.0
Q ss_pred chhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 450 LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 450 l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.++-.+.+.++-.-+-+..||++ |-+|+++|..|++||.+|+|
T Consensus 22 ~~~~~~~~~~~~~~~~~vVTGan--sGIG~eta~~La~~Ga~Vv~ 64 (314)
T KOG1208|consen 22 TTALEVTHGIDLSGKVALVTGAT--SGIGFETARELALRGAHVVL 64 (314)
T ss_pred eecceeeccccCCCcEEEEECCC--CchHHHHHHHHHhCCCEEEE
Confidence 33444666676666889999999 69999999999999999999
No 35
>PRK07063 short chain dehydrogenase; Provisional
Probab=88.91 E-value=0.58 Score=45.95 Aligned_cols=41 Identities=20% Similarity=0.244 Sum_probs=32.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
|.|++||++ +=+|+++|..|+++|.+|++ -++++-+.+.++
T Consensus 8 k~vlVtGas--~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~ 50 (260)
T PRK07063 8 KVALVTGAA--QGIGAAIARAFAREGAAVALADLDAALAERAAAA 50 (260)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 579999999 68999999999999999988 344555555444
No 36
>PRK05854 short chain dehydrogenase; Provisional
Probab=88.90 E-value=0.56 Score=48.28 Aligned_cols=39 Identities=15% Similarity=0.184 Sum_probs=31.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHh
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLK 504 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~ 504 (533)
|-+++||++ +-+|+++|..|+++|.+|++. +.++-++..
T Consensus 15 k~~lITGas--~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~ 55 (313)
T PRK05854 15 KRAVVTGAS--DGLGLGLARRLAAAGAEVILPVRNRAKGEAAV 55 (313)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 678999999 699999999999999999983 334444433
No 37
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=88.83 E-value=0.58 Score=45.35 Aligned_cols=40 Identities=20% Similarity=0.225 Sum_probs=31.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
|.|++||++ +-||+++|..|+++|.+|+++ +++.-+++..
T Consensus 2 ~~vlItGa~--g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~ 43 (255)
T TIGR01963 2 KTALVTGAA--SGIGLAIALALAAAGANVVVNDLGEAGAEAAAK 43 (255)
T ss_pred CEEEEcCCc--chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 458999999 699999999999999999983 2444444433
No 38
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=88.77 E-value=0.59 Score=46.08 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.2
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.|++||++ +-+|+++|..|+++|.+|.+++
T Consensus 2 ~vlItGas--~gIG~aia~~l~~~G~~V~~~~ 31 (259)
T PRK08340 2 NVLVTASS--RGIGFNVARELLKKGARVVISS 31 (259)
T ss_pred eEEEEcCC--cHHHHHHHHHHHHcCCEEEEEe
Confidence 58999999 6999999999999999999843
No 39
>PRK12829 short chain dehydrogenase; Provisional
Probab=88.67 E-value=0.71 Score=45.08 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=28.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +-+|+++|..|+++|.+|.++.
T Consensus 12 ~~vlItGa~--g~iG~~~a~~L~~~g~~V~~~~ 42 (264)
T PRK12829 12 LRVLVTGGA--SGIGRAIAEAFAEAGARVHVCD 42 (264)
T ss_pred CEEEEeCCC--CcHHHHHHHHHHHCCCEEEEEe
Confidence 689999999 6999999999999999998843
No 40
>PRK07062 short chain dehydrogenase; Provisional
Probab=88.64 E-value=0.51 Score=46.52 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=32.8
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhcc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLR 506 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~~ 506 (533)
-|-+++||++ +-+|+++|..|.++|.+|+++ +.++-++..++
T Consensus 8 ~k~~lItGas--~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 51 (265)
T PRK07062 8 GRVAVVTGGS--SGIGLATVELLLEAGASVAICGRDEERLASAEAR 51 (265)
T ss_pred CCEEEEeCCC--chHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 4679999999 699999999999999999883 33444444433
No 41
>PRK06841 short chain dehydrogenase; Provisional
Probab=88.63 E-value=0.49 Score=46.15 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=29.5
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeechh
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 498 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~ 498 (533)
-|.|++||++ +.+|+++|..|+++|.+|++++++
T Consensus 15 ~k~vlItGas--~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 15 GKVAVVTGGA--SGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred CCEEEEECCC--ChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3579999999 699999999999999999985443
No 42
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=88.51 E-value=0.65 Score=45.07 Aligned_cols=29 Identities=24% Similarity=0.362 Sum_probs=27.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +.+|+++|..|.++|.+|.+
T Consensus 5 ~~vlItG~s--g~iG~~la~~l~~~g~~v~~ 33 (258)
T PRK12429 5 KVALVTGAA--SGIGLEIALALAKEGAKVVI 33 (258)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCeEEE
Confidence 579999999 69999999999999999988
No 43
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=88.33 E-value=0.67 Score=45.77 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=32.6
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
-|.|++||++ +-+|+++|..|.++|.+|+++ +.++-++++.
T Consensus 5 ~k~vlItGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~ 47 (262)
T TIGR03325 5 GEVVLVTGGA--SGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA 47 (262)
T ss_pred CcEEEEECCC--ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 3689999999 689999999999999999983 3344445443
No 44
>PRK07478 short chain dehydrogenase; Provisional
Probab=88.31 E-value=0.67 Score=45.36 Aligned_cols=40 Identities=18% Similarity=0.276 Sum_probs=32.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
|.+++||++ +-+|+++|..|+++|.+|+++ ++++-+.+.+
T Consensus 7 k~~lItGas--~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~ 48 (254)
T PRK07478 7 KVAIITGAS--SGIGRAAAKLFAREGAKVVVGARRQAELDQLVA 48 (254)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 568999999 699999999999999999983 3444444443
No 45
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=88.31 E-value=0.51 Score=43.78 Aligned_cols=27 Identities=30% Similarity=0.416 Sum_probs=25.8
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|+++|+| +++|++++..|.++|.+|..
T Consensus 1 I~V~Gat--G~vG~~l~~~L~~~~~~V~~ 27 (183)
T PF13460_consen 1 ILVFGAT--GFVGRALAKQLLRRGHEVTA 27 (183)
T ss_dssp EEEETTT--SHHHHHHHHHHHHTTSEEEE
T ss_pred eEEECCC--ChHHHHHHHHHHHCCCEEEE
Confidence 7899999 69999999999999999999
No 46
>PRK06179 short chain dehydrogenase; Provisional
Probab=88.16 E-value=0.54 Score=46.45 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=28.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
+.|++||++ +-+|+++|..|+++|.+|..+.+
T Consensus 5 ~~vlVtGas--g~iG~~~a~~l~~~g~~V~~~~r 36 (270)
T PRK06179 5 KVALVTGAS--SGIGRATAEKLARAGYRVFGTSR 36 (270)
T ss_pred CEEEEecCC--CHHHHHHHHHHHHCCCEEEEEeC
Confidence 469999999 69999999999999999998443
No 47
>PRK07825 short chain dehydrogenase; Provisional
Probab=88.09 E-value=0.72 Score=45.73 Aligned_cols=29 Identities=28% Similarity=0.395 Sum_probs=27.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +-+|+++|..|+++|.+|+.
T Consensus 6 ~~ilVtGas--ggiG~~la~~l~~~G~~v~~ 34 (273)
T PRK07825 6 KVVAITGGA--RGIGLATARALAALGARVAI 34 (273)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEE
Confidence 579999999 69999999999999999988
No 48
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=88.08 E-value=0.84 Score=44.67 Aligned_cols=33 Identities=27% Similarity=0.337 Sum_probs=29.0
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.-|.|++||++ +-+|+++|..|+++|.+|.+.+
T Consensus 9 ~~k~vlItGa~--g~iG~~ia~~l~~~G~~V~~~~ 41 (255)
T PRK07523 9 TGRRALVTGSS--QGIGYALAEGLAQAGAEVILNG 41 (255)
T ss_pred CCCEEEEECCc--chHHHHHHHHHHHcCCEEEEEe
Confidence 34689999999 6999999999999999999843
No 49
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=88.04 E-value=0.85 Score=44.60 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=31.8
Q ss_pred hcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 457 ~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+++.-+-|.|++||++ +-+|+++|..|+++|.+|.+++
T Consensus 5 ~~~~~~~k~ilItGas--~~IG~~la~~l~~~G~~v~~~~ 42 (256)
T PRK06124 5 QRFSLAGQVALVTGSA--RGLGFEIARALAGAGAHVLVNG 42 (256)
T ss_pred cccCCCCCEEEEECCC--chHHHHHHHHHHHcCCeEEEEe
Confidence 3444456789999999 6999999999999999999943
No 50
>PRK06182 short chain dehydrogenase; Validated
Probab=88.01 E-value=0.77 Score=45.61 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +.+|+++|..|+++|.+|+.+
T Consensus 4 k~vlItGas--ggiG~~la~~l~~~G~~V~~~ 33 (273)
T PRK06182 4 KVALVTGAS--SGIGKATARRLAAQGYTVYGA 33 (273)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHCCCEEEEE
Confidence 679999999 699999999999999999983
No 51
>PRK07454 short chain dehydrogenase; Provisional
Probab=87.93 E-value=0.91 Score=43.97 Aligned_cols=33 Identities=18% Similarity=0.383 Sum_probs=29.1
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+-|.+++||++ +.+|+++|..|+++|.+|.+++
T Consensus 5 ~~k~vlItG~s--g~iG~~la~~l~~~G~~V~~~~ 37 (241)
T PRK07454 5 SMPRALITGAS--SGIGKATALAFAKAGWDLALVA 37 (241)
T ss_pred CCCEEEEeCCC--chHHHHHHHHHHHCCCEEEEEe
Confidence 34679999999 6999999999999999999833
No 52
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=87.85 E-value=0.91 Score=43.47 Aligned_cols=29 Identities=24% Similarity=0.384 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +.+|+++|..|+++|.+|++
T Consensus 6 ~~vlItG~s--g~iG~~l~~~l~~~G~~v~~ 34 (248)
T PRK05557 6 KVALVTGAS--RGIGRAIAERLAAQGANVVI 34 (248)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEE
Confidence 679999999 69999999999999999966
No 53
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=87.83 E-value=0.62 Score=42.27 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=31.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCc-EEEeec----hhHHHHHhccCC
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVATIC----KDDYEKLKLRIP 508 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~-~v~~~~----~~~~~~~~~~~~ 508 (533)
|-|++||++ +-||+++|..|+++|- +|+.++ .++.+++..+.+
T Consensus 1 k~~lItGa~--~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~ 48 (167)
T PF00106_consen 1 KTVLITGAS--SGIGRALARALARRGARVVILTSRSEDSEGAQELIQELK 48 (167)
T ss_dssp EEEEEETTT--SHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEEEECCC--CHHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence 568999999 6999999999999965 444433 355555544443
No 54
>PRK07024 short chain dehydrogenase; Provisional
Probab=87.72 E-value=0.84 Score=44.90 Aligned_cols=43 Identities=19% Similarity=0.444 Sum_probs=33.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhccCC
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLRIP 508 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~~~~ 508 (533)
+.|++||++ +=+|+++|..|+++|.+|+++. .++-+.++++.+
T Consensus 3 ~~vlItGas--~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 47 (257)
T PRK07024 3 LKVFITGAS--SGIGQALAREYARQGATLGLVARRTDALQAFAARLP 47 (257)
T ss_pred CEEEEEcCC--cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence 568999999 6999999999999999999833 444444444443
No 55
>PRK08177 short chain dehydrogenase; Provisional
Probab=87.71 E-value=0.59 Score=45.05 Aligned_cols=30 Identities=17% Similarity=0.266 Sum_probs=27.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +.+|+++|..|+++|.+|+.+
T Consensus 2 k~vlItG~s--g~iG~~la~~l~~~G~~V~~~ 31 (225)
T PRK08177 2 RTALIIGAS--RGLGLGLVDRLLERGWQVTAT 31 (225)
T ss_pred CEEEEeCCC--chHHHHHHHHHHhCCCEEEEE
Confidence 568999999 699999999999999999983
No 56
>PRK09135 pteridine reductase; Provisional
Probab=87.70 E-value=0.84 Score=43.94 Aligned_cols=31 Identities=26% Similarity=0.425 Sum_probs=28.3
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
.+.|++||++ +=||+++|..|+++|.+|+.+
T Consensus 6 ~~~vlItGa~--g~iG~~l~~~l~~~g~~v~~~ 36 (249)
T PRK09135 6 AKVALITGGA--RRIGAAIARTLHAAGYRVAIH 36 (249)
T ss_pred CCEEEEeCCC--chHHHHHHHHHHHCCCEEEEE
Confidence 4679999999 699999999999999999984
No 57
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=87.48 E-value=0.75 Score=45.36 Aligned_cols=32 Identities=13% Similarity=0.275 Sum_probs=28.6
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
-|-|++||++ +=+|+++|..|+++|.+|++.+
T Consensus 8 ~k~~lItGas--~gIG~aia~~l~~~G~~vv~~~ 39 (251)
T PRK12481 8 GKVAIITGCN--TGLGQGMAIGLAKAGADIVGVG 39 (251)
T ss_pred CCEEEEeCCC--chHHHHHHHHHHHCCCEEEEec
Confidence 3679999999 6899999999999999999843
No 58
>PRK12742 oxidoreductase; Provisional
Probab=87.48 E-value=0.85 Score=43.88 Aligned_cols=41 Identities=24% Similarity=0.308 Sum_probs=32.6
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee---chhHHHHHhc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI---CKDDYEKLKL 505 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~---~~~~~~~~~~ 505 (533)
-|.|++||++ +-||+++|..|.++|.+|+++ ++++-+++.+
T Consensus 6 ~k~vlItGas--ggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~ 49 (237)
T PRK12742 6 GKKVLVLGGS--RGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ 49 (237)
T ss_pred CCEEEEECCC--ChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH
Confidence 3689999999 699999999999999999773 3455555543
No 59
>PRK06197 short chain dehydrogenase; Provisional
Probab=87.47 E-value=0.67 Score=47.09 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=30.8
Q ss_pred cCCc-CcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 458 SLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 458 ~ip~-~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.+|+ .-|.|++||++ +-+|+++|..|+++|.+|++.+
T Consensus 10 ~~~~~~~k~vlItGas--~gIG~~~a~~l~~~G~~vi~~~ 47 (306)
T PRK06197 10 DIPDQSGRVAVVTGAN--TGLGYETAAALAAKGAHVVLAV 47 (306)
T ss_pred ccccCCCCEEEEcCCC--CcHHHHHHHHHHHCCCEEEEEe
Confidence 3454 34789999999 6999999999999999998733
No 60
>PRK05717 oxidoreductase; Validated
Probab=87.46 E-value=1 Score=44.25 Aligned_cols=35 Identities=17% Similarity=0.178 Sum_probs=30.3
Q ss_pred CCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 459 ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
++..-|.|++||++ +-+|+++|..|.++|.+|.++
T Consensus 6 ~~~~~k~vlItG~s--g~IG~~~a~~l~~~g~~v~~~ 40 (255)
T PRK05717 6 PGHNGRVALVTGAA--RGIGLGIAAWLIAEGWQVVLA 40 (255)
T ss_pred cccCCCEEEEeCCc--chHHHHHHHHHHHcCCEEEEE
Confidence 34455789999999 699999999999999999984
No 61
>PRK05884 short chain dehydrogenase; Provisional
Probab=87.43 E-value=0.81 Score=44.54 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=31.2
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
+|++||++ +-+|+++|..|+++|.+|... ++++.+++.+
T Consensus 2 ~vlItGas--~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~ 42 (223)
T PRK05884 2 EVLVTGGD--TDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK 42 (223)
T ss_pred eEEEEeCC--chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 58999999 689999999999999999883 3455554443
No 62
>PRK05872 short chain dehydrogenase; Provisional
Probab=87.38 E-value=0.99 Score=45.86 Aligned_cols=44 Identities=18% Similarity=0.279 Sum_probs=35.1
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccCC
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~~ 508 (533)
-+.|++||++ +-||+++|..|+++|.+|++ -+.++-+.+.++.+
T Consensus 9 gk~vlItGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~ 54 (296)
T PRK05872 9 GKVVVVTGAA--RGIGAELARRLHARGAKLALVDLEEAELAALAAELG 54 (296)
T ss_pred CCEEEEECCC--chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 4679999999 69999999999999999988 34455556655543
No 63
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=87.37 E-value=0.89 Score=44.11 Aligned_cols=29 Identities=24% Similarity=0.412 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +.+|+++|.+|+++|.+|++
T Consensus 5 ~~vlItGa~--g~iG~~~a~~l~~~g~~v~~ 33 (250)
T PRK08063 5 KVALVTGSS--RGIGKAIALRLAEEGYDIAV 33 (250)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEE
Confidence 579999999 69999999999999999876
No 64
>PLN02253 xanthoxin dehydrogenase
Probab=87.31 E-value=0.94 Score=45.09 Aligned_cols=30 Identities=17% Similarity=0.347 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +=+|+++|..|+++|.+|++.
T Consensus 19 k~~lItGas--~gIG~~la~~l~~~G~~v~~~ 48 (280)
T PLN02253 19 KVALVTGGA--TGIGESIVRLFHKHGAKVCIV 48 (280)
T ss_pred CEEEEECCC--chHHHHHHHHHHHcCCEEEEE
Confidence 679999999 699999999999999999984
No 65
>PRK06500 short chain dehydrogenase; Provisional
Probab=87.27 E-value=0.91 Score=43.90 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=31.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~~ 506 (533)
|.|++||++ +-+|+++|..|+++|.+|++++ ++.-+.++++
T Consensus 7 k~vlItGas--g~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (249)
T PRK06500 7 KTALITGGT--SGIGLETARQFLAEGARVAITGRDPASLEAARAE 49 (249)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH
Confidence 579999999 6999999999999999998843 3333444433
No 66
>PRK08589 short chain dehydrogenase; Validated
Probab=87.15 E-value=0.76 Score=45.86 Aligned_cols=31 Identities=23% Similarity=0.289 Sum_probs=28.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|-|++||++ +-+|++||..|+++|.+|++++
T Consensus 7 k~vlItGas--~gIG~aia~~l~~~G~~vi~~~ 37 (272)
T PRK08589 7 KVAVITGAS--TGIGQASAIALAQEGAYVLAVD 37 (272)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEEEe
Confidence 578999999 6999999999999999999943
No 67
>PRK06180 short chain dehydrogenase; Provisional
Probab=87.04 E-value=0.92 Score=45.34 Aligned_cols=41 Identities=15% Similarity=0.193 Sum_probs=32.0
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKL 505 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~ 505 (533)
-+.|++||++ +.+|+++|..|.++|.+|.+++ .++-+.+++
T Consensus 4 ~~~vlVtGas--ggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~ 46 (277)
T PRK06180 4 MKTWLITGVS--SGFGRALAQAALAAGHRVVGTVRSEAARADFEA 46 (277)
T ss_pred CCEEEEecCC--ChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh
Confidence 3569999999 6999999999999999999833 343344433
No 68
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=86.91 E-value=0.73 Score=44.45 Aligned_cols=31 Identities=23% Similarity=0.335 Sum_probs=27.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +-+|+++|.+|+++|.+|.+++
T Consensus 7 ~~ilItGas--g~iG~~l~~~l~~~g~~V~~~~ 37 (251)
T PRK12826 7 RVALVTGAA--RGIGRAIAVRLAADGAEVIVVD 37 (251)
T ss_pred CEEEEcCCC--CcHHHHHHHHHHHCCCEEEEEe
Confidence 468999999 6999999999999999998843
No 69
>PRK07856 short chain dehydrogenase; Provisional
Probab=86.61 E-value=0.75 Score=45.03 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=29.2
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
-|.+++||++ +-+|+++|..|+++|.+|+++++
T Consensus 6 ~k~~lItGas--~gIG~~la~~l~~~g~~v~~~~r 38 (252)
T PRK07856 6 GRVVLVTGGT--RGIGAGIARAFLAAGATVVVCGR 38 (252)
T ss_pred CCEEEEeCCC--chHHHHHHHHHHHCCCEEEEEeC
Confidence 4778999999 69999999999999999998443
No 70
>PRK06398 aldose dehydrogenase; Validated
Probab=86.58 E-value=0.71 Score=45.71 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=28.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|.|++||++ +-+|+++|..|+++|.+|++++
T Consensus 7 k~vlItGas--~gIG~~ia~~l~~~G~~Vi~~~ 37 (258)
T PRK06398 7 KVAIVTGGS--QGIGKAVVNRLKEEGSNVINFD 37 (258)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCeEEEEe
Confidence 679999999 6999999999999999999843
No 71
>PRK06101 short chain dehydrogenase; Provisional
Probab=86.54 E-value=1 Score=43.87 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +=+|+++|..|+++|.+|++++
T Consensus 2 ~~vlItGas--~giG~~la~~L~~~G~~V~~~~ 32 (240)
T PRK06101 2 TAVLITGAT--SGIGKQLALDYAKQGWQVIACG 32 (240)
T ss_pred cEEEEEcCC--cHHHHHHHHHHHhCCCEEEEEE
Confidence 468999999 6999999999999999999843
No 72
>PRK07326 short chain dehydrogenase; Provisional
Probab=86.42 E-value=0.97 Score=43.47 Aligned_cols=31 Identities=29% Similarity=0.353 Sum_probs=28.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +.+|+++|.+|.++|.+|++++
T Consensus 7 ~~ilItGat--g~iG~~la~~l~~~g~~V~~~~ 37 (237)
T PRK07326 7 KVALITGGS--KGIGFAIAEALLAEGYKVAITA 37 (237)
T ss_pred CEEEEECCC--CcHHHHHHHHHHHCCCEEEEee
Confidence 679999999 6999999999999999999844
No 73
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=86.41 E-value=1 Score=43.54 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +-+|+++|..|+++|.+|++++
T Consensus 6 ~~vlItGas--g~iG~~l~~~l~~~G~~V~~~~ 36 (251)
T PRK07231 6 KVAIVTGAS--SGIGEGIARRFAAEGARVVVTD 36 (251)
T ss_pred cEEEEECCC--ChHHHHHHHHHHHCCCEEEEEe
Confidence 468999999 6999999999999999998833
No 74
>PRK12939 short chain dehydrogenase; Provisional
Probab=86.37 E-value=1 Score=43.41 Aligned_cols=31 Identities=26% Similarity=0.342 Sum_probs=28.1
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
-+.|++||++ +-+|+++|..|+++|.+|.++
T Consensus 7 ~~~vlItGa~--g~iG~~la~~l~~~G~~v~~~ 37 (250)
T PRK12939 7 GKRALVTGAA--RGLGAAFAEALAEAGATVAFN 37 (250)
T ss_pred CCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEE
Confidence 3679999999 699999999999999999884
No 75
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=86.24 E-value=1.2 Score=45.22 Aligned_cols=85 Identities=21% Similarity=0.232 Sum_probs=60.5
Q ss_pred cccccccceeeccCCCCceeEEeeCCcch----hhhhhhcCCcCcceEEEeccccchh--hHHHHHHHhhhcCcEEEe-e
Q 009511 423 EELNRNGEIYLERQPNKLKIKVVDGSSLA----AAVVVNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVAT-I 495 (533)
Q Consensus 423 ~~ln~~g~l~~~~~p~~l~vrvv~g~~l~----aa~v~~~ip~~~~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~-~ 495 (533)
+.+|..+-+-.+|.-+.-.+...++.... ++.....++ .-+.++|.|....+| |+-|||..||++|++|+. .
T Consensus 62 ~~~~~~a~~p~~k~~~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~ 140 (254)
T COG1484 62 ERRLRSASFPAKKTFEEFDFEFQPGIDKKALEDLASLVEFFE-RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFIT 140 (254)
T ss_pred HHHHHHhcCCccCCcccccccCCcchhHHHHHHHHHHHHHhc-cCCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEE
Confidence 33444444444455446666666666554 334445777 777889999876567 999999999999999999 7
Q ss_pred chhHHHHHhccCC
Q 009511 496 CKDDYEKLKLRIP 508 (533)
Q Consensus 496 ~~~~~~~~~~~~~ 508 (533)
..|-...||..-.
T Consensus 141 ~~el~~~Lk~~~~ 153 (254)
T COG1484 141 APDLLSKLKAAFD 153 (254)
T ss_pred HHHHHHHHHHHHh
Confidence 7888888887633
No 76
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=86.19 E-value=1 Score=44.71 Aligned_cols=44 Identities=23% Similarity=0.317 Sum_probs=33.1
Q ss_pred ceEEEeccc-cchhhHHHHHHHhhhcCcEEEeech----hHHHHHhccCC
Q 009511 464 AHVLLRGTV-TANKVANAVASSLCQMGIKVATICK----DDYEKLKLRIP 508 (533)
Q Consensus 464 ~~v~l~g~~-~~~k~~~aia~~lc~~~~~v~~~~~----~~~~~~~~~~~ 508 (533)
|-|++||+. + +=+|+|+|..|+++|.+|++..+ +.-++++++.+
T Consensus 8 k~~lItGa~~s-~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~ 56 (256)
T PRK07889 8 KRILVTGVITD-SSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP 56 (256)
T ss_pred CEEEEeCCCCc-chHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC
Confidence 568999993 2 68999999999999999998432 33455555543
No 77
>PRK08643 acetoin reductase; Validated
Probab=86.11 E-value=1.1 Score=43.91 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=31.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~~ 506 (533)
|.+++||++ +=+|+++|.+|+++|.+|.+++ .++-++++++
T Consensus 3 k~~lItGas--~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~ 45 (256)
T PRK08643 3 KVALVTGAG--QGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADK 45 (256)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 568999999 6899999999999999998843 3344444433
No 78
>PRK05866 short chain dehydrogenase; Provisional
Probab=86.08 E-value=1 Score=45.84 Aligned_cols=30 Identities=23% Similarity=0.471 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +-+|+++|..|+++|.+|+++
T Consensus 41 k~vlItGas--ggIG~~la~~La~~G~~Vi~~ 70 (293)
T PRK05866 41 KRILLTGAS--SGIGEAAAEQFARRGATVVAV 70 (293)
T ss_pred CEEEEeCCC--cHHHHHHHHHHHHCCCEEEEE
Confidence 679999999 699999999999999999983
No 79
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=86.08 E-value=0.93 Score=43.92 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +.||+++|..|+++|.+|..
T Consensus 7 ~~vlitGas--g~iG~~l~~~l~~~g~~v~~ 35 (252)
T PRK06077 7 KVVVVTGSG--RGIGRAIAVRLAKEGSLVVV 35 (252)
T ss_pred cEEEEeCCC--ChHHHHHHHHHHHCCCEEEE
Confidence 679999999 69999999999999999876
No 80
>PRK08251 short chain dehydrogenase; Provisional
Probab=86.05 E-value=0.98 Score=43.84 Aligned_cols=40 Identities=23% Similarity=0.360 Sum_probs=31.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
|.|++||++ +-+|+++|..|+++|.+|+.. +.++-+.+..
T Consensus 3 k~vlItGas--~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 44 (248)
T PRK08251 3 QKILITGAS--SGLGAGMAREFAAKGRDLALCARRTDRLEELKA 44 (248)
T ss_pred CEEEEECCC--CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 468999999 699999999999999999883 3344444443
No 81
>PRK08339 short chain dehydrogenase; Provisional
Probab=85.99 E-value=1.1 Score=44.79 Aligned_cols=40 Identities=15% Similarity=0.233 Sum_probs=31.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
|-+++||++ +=+|+++|..|.++|.+|++. ++++-+.+++
T Consensus 9 k~~lItGas--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 50 (263)
T PRK08339 9 KLAFTTASS--KGIGFGVARVLARAGADVILLSRNEENLKKARE 50 (263)
T ss_pred CEEEEeCCC--CcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 578999999 689999999999999999983 3344444433
No 82
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=85.96 E-value=1.1 Score=43.80 Aligned_cols=32 Identities=16% Similarity=0.367 Sum_probs=28.6
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
.-|.+++||++ +-+|+++|..|+++|.+|++.
T Consensus 8 ~~k~~lItGas--~giG~~ia~~L~~~G~~vvl~ 39 (254)
T PRK08085 8 AGKNILITGSA--QGIGFLLATGLAEYGAEIIIN 39 (254)
T ss_pred CCCEEEEECCC--ChHHHHHHHHHHHcCCEEEEE
Confidence 34679999999 699999999999999999993
No 83
>PRK06523 short chain dehydrogenase; Provisional
Probab=85.92 E-value=0.8 Score=44.90 Aligned_cols=33 Identities=21% Similarity=0.378 Sum_probs=29.0
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
-|.|++||++ +-||+++|..|+++|.+|+.+++
T Consensus 9 ~k~vlItGas--~gIG~~ia~~l~~~G~~v~~~~r 41 (260)
T PRK06523 9 GKRALVTGGT--KGIGAATVARLLEAGARVVTTAR 41 (260)
T ss_pred CCEEEEECCC--CchhHHHHHHHHHCCCEEEEEeC
Confidence 3679999999 69999999999999999988443
No 84
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=85.92 E-value=1.2 Score=44.01 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=33.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccC
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~ 507 (533)
|.|++||++ +=+|+++|..|.++|.+|.+ -++++-+++.++.
T Consensus 7 k~vlVtGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (263)
T PRK06200 7 QVALITGGG--SGIGRALVERFLAEGARVAVLERSAEKLASLRQRF 50 (263)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 578999999 58999999999999999988 3445556665544
No 85
>PRK08017 oxidoreductase; Provisional
Probab=85.88 E-value=1.2 Score=43.36 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=27.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +-+|+++|..|+++|.+|++.
T Consensus 3 k~vlVtGas--g~IG~~la~~l~~~g~~v~~~ 32 (256)
T PRK08017 3 KSVLITGCS--SGIGLEAALELKRRGYRVLAA 32 (256)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHCCCEEEEE
Confidence 569999999 699999999999999999883
No 86
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=85.88 E-value=0.94 Score=43.98 Aligned_cols=29 Identities=24% Similarity=0.280 Sum_probs=26.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.|++||++ +-+|+++|..|+++|.+|++
T Consensus 3 k~ilItGas--~giG~~la~~l~~~g~~v~~ 31 (248)
T PRK06947 3 KVVLITGAS--RGIGRATAVLAAARGWSVGI 31 (248)
T ss_pred cEEEEeCCC--CcHHHHHHHHHHHCCCEEEE
Confidence 578999999 69999999999999999976
No 87
>PRK09291 short chain dehydrogenase; Provisional
Probab=85.79 E-value=0.91 Score=44.22 Aligned_cols=29 Identities=24% Similarity=0.347 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +-+|+++|..|+++|.+|+.
T Consensus 3 ~~vlVtGas--g~iG~~ia~~l~~~G~~v~~ 31 (257)
T PRK09291 3 KTILITGAG--SGFGREVALRLARKGHNVIA 31 (257)
T ss_pred CEEEEeCCC--CHHHHHHHHHHHHCCCEEEE
Confidence 468999999 69999999999999999988
No 88
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=85.77 E-value=1.2 Score=42.68 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +.+|+++|..|.++|.+|.+++
T Consensus 6 ~~ilItGas--g~iG~~l~~~l~~~g~~v~~~~ 36 (246)
T PRK05653 6 KTALVTGAS--RGIGRAIALRLAADGAKVVIYD 36 (246)
T ss_pred CEEEEECCC--cHHHHHHHHHHHHCCCEEEEEe
Confidence 569999999 6999999999999999998843
No 89
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=85.73 E-value=0.7 Score=46.28 Aligned_cols=28 Identities=25% Similarity=0.330 Sum_probs=26.0
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|++||+| +++|++++.+|.++|.+|..+
T Consensus 2 ilVtGat--G~iG~~vv~~L~~~g~~V~~~ 29 (285)
T TIGR03649 2 ILLTGGT--GKTASRIARLLQAASVPFLVA 29 (285)
T ss_pred EEEEcCC--ChHHHHHHHHHHhCCCcEEEE
Confidence 7999999 699999999999999998883
No 90
>PRK06483 dihydromonapterin reductase; Provisional
Probab=85.65 E-value=0.99 Score=43.65 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=28.4
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.|.|++||++ +-+|+++|..|+++|.+|++.+
T Consensus 2 ~k~vlItGas--~gIG~~ia~~l~~~G~~V~~~~ 33 (236)
T PRK06483 2 PAPILITGAG--QRIGLALAWHLLAQGQPVIVSY 33 (236)
T ss_pred CceEEEECCC--ChHHHHHHHHHHHCCCeEEEEe
Confidence 3578999999 6999999999999999999843
No 91
>PRK06194 hypothetical protein; Provisional
Probab=85.59 E-value=1.1 Score=44.54 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=27.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +=+|+++|..|+++|.+|.++
T Consensus 7 k~vlVtGas--ggIG~~la~~l~~~G~~V~~~ 36 (287)
T PRK06194 7 KVAVITGAA--SGFGLAFARIGAALGMKLVLA 36 (287)
T ss_pred CEEEEeCCc--cHHHHHHHHHHHHCCCEEEEE
Confidence 569999999 699999999999999999883
No 92
>PRK08267 short chain dehydrogenase; Provisional
Probab=85.46 E-value=1.2 Score=43.63 Aligned_cols=41 Identities=15% Similarity=0.250 Sum_probs=31.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~~ 506 (533)
|.|++||++ +=+|+++|..|+++|.+|.+++ ++.-+.+.++
T Consensus 2 k~vlItGas--g~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 44 (260)
T PRK08267 2 KSIFITGAA--SGIGRATALLFAAEGWRVGAYDINEAGLAALAAE 44 (260)
T ss_pred cEEEEeCCC--chHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 568999999 6999999999999999999843 3434444333
No 93
>PRK07023 short chain dehydrogenase; Provisional
Probab=85.31 E-value=0.87 Score=44.26 Aligned_cols=31 Identities=26% Similarity=0.393 Sum_probs=27.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +-+|+++|..|+++|.+|++++
T Consensus 2 ~~vlItGas--ggiG~~ia~~l~~~G~~v~~~~ 32 (243)
T PRK07023 2 VRAIVTGHS--RGLGAALAEQLLQPGIAVLGVA 32 (243)
T ss_pred ceEEEecCC--cchHHHHHHHHHhCCCEEEEEe
Confidence 368999999 6999999999999999998843
No 94
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=85.31 E-value=1.3 Score=43.42 Aligned_cols=39 Identities=23% Similarity=0.331 Sum_probs=30.5
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
.|++||++ +=+|+++|..|+++|.+|..+ ++++-+.++.
T Consensus 2 ~vlItGas--g~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (248)
T PRK10538 2 IVLVTGAT--AGFGECITRRFIQQGHKVIATGRRQERLQELKD 42 (248)
T ss_pred EEEEECCC--chHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 48999999 699999999999999999983 3344344433
No 95
>PRK07102 short chain dehydrogenase; Provisional
Probab=85.15 E-value=1.3 Score=43.07 Aligned_cols=31 Identities=19% Similarity=0.352 Sum_probs=27.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +-+|+++|..|+++|.+|++++
T Consensus 2 ~~vlItGas--~giG~~~a~~l~~~G~~Vi~~~ 32 (243)
T PRK07102 2 KKILIIGAT--SDIARACARRYAAAGARLYLAA 32 (243)
T ss_pred cEEEEEcCC--cHHHHHHHHHHHhcCCEEEEEe
Confidence 568999999 6999999999999999998843
No 96
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=85.00 E-value=1.3 Score=43.39 Aligned_cols=29 Identities=21% Similarity=0.327 Sum_probs=27.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.|++||++ +-+|+++|..|+++|.+|++
T Consensus 13 k~ilItGa~--g~IG~~la~~l~~~G~~V~~ 41 (259)
T PRK08213 13 KTALVTGGS--RGLGLQIAEALGEAGARVVL 41 (259)
T ss_pred CEEEEECCC--chHHHHHHHHHHHcCCEEEE
Confidence 679999999 69999999999999999988
No 97
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=84.99 E-value=1.2 Score=42.88 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|.|++||++ +-+|+++|..|+++|.+|+++.
T Consensus 3 k~vlItG~s--~~iG~~la~~l~~~g~~vi~~~ 33 (245)
T PRK12824 3 KIALVTGAK--RGIGSAIARELLNDGYRVIATY 33 (245)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHcCCEEEEEe
Confidence 468999999 6999999999999999999943
No 98
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=84.95 E-value=1.3 Score=43.60 Aligned_cols=38 Identities=13% Similarity=0.276 Sum_probs=30.8
Q ss_pred hhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 456 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 456 ~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+++..-.-|.+++||++ +-+|+++|..|+++|.+|++.
T Consensus 3 ~~~~~l~~k~~lItG~~--~gIG~a~a~~l~~~G~~vv~~ 40 (253)
T PRK08993 3 LDAFSLEGKVAVVTGCD--TGLGQGMALGLAEAGCDIVGI 40 (253)
T ss_pred ccccCCCCCEEEEECCC--chHHHHHHHHHHHCCCEEEEe
Confidence 34433334689999999 699999999999999999873
No 99
>PRK12828 short chain dehydrogenase; Provisional
Probab=84.77 E-value=1.4 Score=42.01 Aligned_cols=32 Identities=28% Similarity=0.343 Sum_probs=28.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
|-|++||++ +-+|+++|..|+++|.+|+++++
T Consensus 8 k~vlItGat--g~iG~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 8 KVVAITGGF--GGLGRATAAWLAARGARVALIGR 39 (239)
T ss_pred CEEEEECCC--CcHhHHHHHHHHHCCCeEEEEeC
Confidence 569999999 69999999999999999988543
No 100
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=84.69 E-value=1.3 Score=43.53 Aligned_cols=32 Identities=13% Similarity=0.224 Sum_probs=28.7
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
.-|.|++||++ +=+|++||..|+++|.+|.+.
T Consensus 14 ~~k~vlItGas--~gIG~~ia~~l~~~G~~v~~~ 45 (258)
T PRK06935 14 DGKVAIVTGGN--TGLGQGYAVALAKAGADIIIT 45 (258)
T ss_pred CCCEEEEeCCC--chHHHHHHHHHHHCCCEEEEE
Confidence 34789999999 699999999999999999883
No 101
>PRK05876 short chain dehydrogenase; Provisional
Probab=84.57 E-value=1.4 Score=44.46 Aligned_cols=29 Identities=14% Similarity=0.302 Sum_probs=27.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.|++||++ +=+|+++|..|+++|.+|++
T Consensus 7 k~vlVTGas--~gIG~ala~~La~~G~~Vv~ 35 (275)
T PRK05876 7 RGAVITGGA--SGIGLATGTEFARRGARVVL 35 (275)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEE
Confidence 569999999 69999999999999999988
No 102
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=84.55 E-value=1.1 Score=43.64 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=29.0
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.-+.|++||++ +-+|.++|..|+++|.+|+.++
T Consensus 11 ~~k~vlItG~~--g~iG~~la~~l~~~G~~Vi~~~ 43 (247)
T PRK08945 11 KDRIILVTGAG--DGIGREAALTYARHGATVILLG 43 (247)
T ss_pred CCCEEEEeCCC--chHHHHHHHHHHHCCCcEEEEe
Confidence 44679999999 6999999999999999998844
No 103
>PRK08862 short chain dehydrogenase; Provisional
Probab=84.46 E-value=1.4 Score=43.24 Aligned_cols=30 Identities=7% Similarity=0.269 Sum_probs=27.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.+++||++ +=+|+++|..|+++|.+|++.
T Consensus 6 k~~lVtGas--~GIG~aia~~la~~G~~V~~~ 35 (227)
T PRK08862 6 SIILITSAG--SVLGRTISCHFARLGATLILC 35 (227)
T ss_pred eEEEEECCc--cHHHHHHHHHHHHCCCEEEEE
Confidence 678999999 589999999999999999993
No 104
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=84.36 E-value=1.5 Score=42.99 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=27.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +-+|+++|..|.++|.+|+++
T Consensus 3 k~ilItG~~--~~IG~~la~~l~~~g~~vi~~ 32 (259)
T PRK12384 3 QVAVVIGGG--QTLGAFLCHGLAEEGYRVAVA 32 (259)
T ss_pred CEEEEECCC--cHHHHHHHHHHHHCCCEEEEE
Confidence 569999999 699999999999999999884
No 105
>PRK08263 short chain dehydrogenase; Provisional
Probab=84.34 E-value=1.5 Score=43.63 Aligned_cols=30 Identities=13% Similarity=0.157 Sum_probs=27.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +-+|+++|.+|.++|.+|..+
T Consensus 4 k~vlItGas--g~iG~~~a~~l~~~g~~V~~~ 33 (275)
T PRK08263 4 KVWFITGAS--RGFGRAWTEAALERGDRVVAT 33 (275)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCEEEEE
Confidence 579999999 699999999999999999883
No 106
>PRK06914 short chain dehydrogenase; Provisional
Probab=84.28 E-value=1.5 Score=43.65 Aligned_cols=30 Identities=13% Similarity=0.158 Sum_probs=27.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +-+|+++|..|.++|.+|.++
T Consensus 4 k~~lItGas--g~iG~~la~~l~~~G~~V~~~ 33 (280)
T PRK06914 4 KIAIVTGAS--SGFGLLTTLELAKKGYLVIAT 33 (280)
T ss_pred CEEEEECCC--chHHHHHHHHHHhCCCEEEEE
Confidence 468999999 699999999999999999883
No 107
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=84.19 E-value=1.5 Score=42.10 Aligned_cols=30 Identities=23% Similarity=0.193 Sum_probs=27.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +.+|.++|..|+++|.+|+.+
T Consensus 6 ~~vlItGa~--g~iG~~~a~~l~~~G~~V~~~ 35 (238)
T PRK05786 6 KKVAIIGVS--EGLGYAVAYFALKEGAQVCIN 35 (238)
T ss_pred cEEEEECCC--chHHHHHHHHHHHCCCEEEEE
Confidence 579999999 699999999999999999983
No 108
>PRK06057 short chain dehydrogenase; Provisional
Probab=83.92 E-value=1.6 Score=42.85 Aligned_cols=40 Identities=15% Similarity=0.052 Sum_probs=31.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
+.|++||++ +=+|+++|.+|.++|.+|.++ ++++-+++.+
T Consensus 8 ~~vlItGas--ggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~ 49 (255)
T PRK06057 8 RVAVITGGG--SGIGLATARRLAAEGATVVVGDIDPEAGKAAAD 49 (255)
T ss_pred CEEEEECCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 579999999 699999999999999999883 3444444433
No 109
>PRK06953 short chain dehydrogenase; Provisional
Probab=83.83 E-value=1.6 Score=42.04 Aligned_cols=30 Identities=17% Similarity=0.243 Sum_probs=27.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +-||+++|..|+++|.+|+.+
T Consensus 2 ~~vlvtG~s--g~iG~~la~~L~~~G~~v~~~ 31 (222)
T PRK06953 2 KTVLIVGAS--RGIGREFVRQYRADGWRVIAT 31 (222)
T ss_pred ceEEEEcCC--CchhHHHHHHHHhCCCEEEEE
Confidence 468999999 699999999999999999883
No 110
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=83.74 E-value=1.6 Score=42.75 Aligned_cols=29 Identities=28% Similarity=0.381 Sum_probs=27.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +=+|++||..|.++|.+|++
T Consensus 7 ~~vlItGas--~~iG~~ia~~l~~~G~~v~~ 35 (257)
T PRK07067 7 KVALLTGAA--SGIGEAVAERYLAEGARVVI 35 (257)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHcCCEEEE
Confidence 569999999 58999999999999999998
No 111
>PRK07677 short chain dehydrogenase; Provisional
Probab=83.70 E-value=1.6 Score=42.74 Aligned_cols=40 Identities=25% Similarity=0.386 Sum_probs=31.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKL 505 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~ 505 (533)
|.+++||++ +=+|+++|..|+++|.+|++.+ .++-+++.+
T Consensus 2 k~~lItG~s--~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~ 43 (252)
T PRK07677 2 KVVIITGGS--SGMGKAMAKRFAEEGANVVITGRTKEKLEEAKL 43 (252)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 568999999 5899999999999999998833 333444443
No 112
>PRK06125 short chain dehydrogenase; Provisional
Probab=83.65 E-value=1.3 Score=43.46 Aligned_cols=41 Identities=22% Similarity=0.364 Sum_probs=32.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~~ 506 (533)
|.|++||++ +=+|+++|..|+++|.+|++++ .++-+.++++
T Consensus 8 k~vlItG~~--~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (259)
T PRK06125 8 KRVLITGAS--KGIGAAAAEAFAAEGCHLHLVARDADALEALAAD 50 (259)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Confidence 689999999 5899999999999999999833 3444444433
No 113
>PRK08703 short chain dehydrogenase; Provisional
Probab=83.58 E-value=1.6 Score=42.28 Aligned_cols=30 Identities=20% Similarity=0.376 Sum_probs=27.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +=+|+++|..|+++|.+|+++
T Consensus 7 k~vlItG~s--ggiG~~la~~l~~~g~~V~~~ 36 (239)
T PRK08703 7 KTILVTGAS--QGLGEQVAKAYAAAGATVILV 36 (239)
T ss_pred CEEEEECCC--CcHHHHHHHHHHHcCCEEEEE
Confidence 579999999 689999999999999999983
No 114
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=83.58 E-value=1.3 Score=42.98 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=29.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeechhH
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~ 499 (533)
|.+++||++ +=+|+++|..|+++|.+|.++.++.
T Consensus 9 k~vlItGas--~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 9 KTVWVTGAA--QGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEEEecch
Confidence 679999999 6999999999999999999854443
No 115
>PRK06139 short chain dehydrogenase; Provisional
Probab=83.39 E-value=1.5 Score=45.81 Aligned_cols=42 Identities=14% Similarity=0.278 Sum_probs=33.0
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhcc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLR 506 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~~ 506 (533)
-|.|++||++ +=+|+++|..|+++|.+|++. ++++-+++.++
T Consensus 7 ~k~vlITGAs--~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~ 50 (330)
T PRK06139 7 GAVVVITGAS--SGIGQATAEAFARRGARLVLAARDEEALQAVAEE 50 (330)
T ss_pred CCEEEEcCCC--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 3679999999 699999999999999999983 34444444443
No 116
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=83.39 E-value=1.6 Score=42.69 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=28.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
|.|++||++ +=+|+++|..|+++|.+|++.++
T Consensus 9 k~vlVtGas--~gIG~~la~~l~~~G~~v~~~~r 40 (260)
T PRK12823 9 KVVVVTGAA--QGIGRGVALRAAAEGARVVLVDR 40 (260)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEEEeC
Confidence 679999999 68999999999999999998543
No 117
>PRK09072 short chain dehydrogenase; Provisional
Probab=83.34 E-value=1.7 Score=42.82 Aligned_cols=41 Identities=27% Similarity=0.446 Sum_probs=31.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~~ 506 (533)
+.|++||++ +=+|+++|..|+++|.+|++++ +++-+.++++
T Consensus 6 ~~vlItG~s--~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 48 (263)
T PRK09072 6 KRVLLTGAS--GGIGQALAEALAAAGARLLLVGRNAEKLEALAAR 48 (263)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 469999999 6899999999999999999843 3333444433
No 118
>PRK12937 short chain dehydrogenase; Provisional
Probab=83.10 E-value=1.8 Score=41.72 Aligned_cols=29 Identities=24% Similarity=0.376 Sum_probs=27.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +=+|+++|..|+++|.+|++
T Consensus 6 ~~vlItG~~--~~iG~~la~~l~~~g~~v~~ 34 (245)
T PRK12937 6 KVAIVTGAS--RGIGAAIARRLAADGFAVAV 34 (245)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEE
Confidence 579999999 69999999999999999987
No 119
>PRK07774 short chain dehydrogenase; Provisional
Probab=83.07 E-value=1.8 Score=41.93 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=28.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
+.|++||++ +-+|+++|.+|.++|.+|+++++
T Consensus 7 k~vlItGas--g~iG~~la~~l~~~g~~vi~~~r 38 (250)
T PRK07774 7 KVAIVTGAA--GGIGQAYAEALAREGASVVVADI 38 (250)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEEEeC
Confidence 679999999 69999999999999999998443
No 120
>PRK07060 short chain dehydrogenase; Provisional
Probab=82.86 E-value=2.2 Score=41.10 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=29.0
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.-+.+++||++ +-+|+++|..|.++|.+|++++
T Consensus 8 ~~~~~lItGa~--g~iG~~~a~~l~~~g~~V~~~~ 40 (245)
T PRK07060 8 SGKSVLVTGAS--SGIGRACAVALAQRGARVVAAA 40 (245)
T ss_pred CCCEEEEeCCc--chHHHHHHHHHHHCCCEEEEEe
Confidence 34679999999 6999999999999999999843
No 121
>PRK07109 short chain dehydrogenase; Provisional
Probab=82.86 E-value=1.7 Score=45.29 Aligned_cols=41 Identities=24% Similarity=0.379 Sum_probs=32.0
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKL 505 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~ 505 (533)
-+.|++||++ +=+|+++|..|+++|.+|+.++ +++-+.+.+
T Consensus 8 ~k~vlITGas--~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~ 50 (334)
T PRK07109 8 RQVVVITGAS--AGVGRATARAFARRGAKVVLLARGEEGLEALAA 50 (334)
T ss_pred CCEEEEECCC--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 4679999999 6999999999999999998833 344444433
No 122
>PRK07985 oxidoreductase; Provisional
Probab=82.83 E-value=1.6 Score=44.40 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +-+|+++|..|+++|.+|++.
T Consensus 50 k~vlITGas--~gIG~aia~~L~~~G~~Vi~~ 79 (294)
T PRK07985 50 RKALVTGGD--SGIGRAAAIAYAREGADVAIS 79 (294)
T ss_pred CEEEEECCC--CcHHHHHHHHHHHCCCEEEEe
Confidence 679999999 699999999999999999883
No 123
>CHL00194 ycf39 Ycf39; Provisional
Probab=82.81 E-value=1.3 Score=45.37 Aligned_cols=30 Identities=13% Similarity=0.301 Sum_probs=27.1
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.|++||+| +.+|++++.+|.++|.+|..++
T Consensus 2 kIlVtGat--G~iG~~lv~~Ll~~g~~V~~l~ 31 (317)
T CHL00194 2 SLLVIGAT--GTLGRQIVRQALDEGYQVRCLV 31 (317)
T ss_pred EEEEECCC--cHHHHHHHHHHHHCCCeEEEEE
Confidence 58999999 6999999999999999998733
No 124
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=82.78 E-value=2.1 Score=42.34 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=31.3
Q ss_pred hcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 457 ~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|..+-..|.+++||++ +=+|++||..|.++|.+|++
T Consensus 4 ~~~~~~~k~~lItGa~--~~iG~~ia~~l~~~G~~vv~ 39 (265)
T PRK07097 4 NLFSLKGKIALITGAS--YGIGFAIAKAYAKAGATIVF 39 (265)
T ss_pred cccCCCCCEEEEeCCC--chHHHHHHHHHHHCCCeEEE
Confidence 4455566889999999 58999999999999999988
No 125
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=82.64 E-value=1.9 Score=42.46 Aligned_cols=30 Identities=20% Similarity=0.221 Sum_probs=27.7
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-|.|++||++ +-+|+++|..|+++|.+|++
T Consensus 7 ~k~~lItGa~--~gIG~~ia~~l~~~G~~vvi 36 (261)
T PRK08936 7 GKVVVITGGS--TGLGRAMAVRFGKEKAKVVI 36 (261)
T ss_pred CCEEEEeCCC--ChHHHHHHHHHHHCCCEEEE
Confidence 4678999999 69999999999999999987
No 126
>PLN00198 anthocyanidin reductase; Provisional
Probab=82.62 E-value=1.5 Score=45.03 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=29.4
Q ss_pred CcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|-.-+.|++||++ +-+|+++|.+|+++|.+|..
T Consensus 6 ~~~~~~vlItG~~--GfIG~~l~~~L~~~g~~V~~ 38 (338)
T PLN00198 6 PTGKKTACVIGGT--GFLASLLIKLLLQKGYAVNT 38 (338)
T ss_pred CCCCCeEEEECCc--hHHHHHHHHHHHHCCCEEEE
Confidence 5566789999999 69999999999999999864
No 127
>PRK07074 short chain dehydrogenase; Provisional
Probab=82.38 E-value=2 Score=42.02 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=27.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.+++||++ +-+|+++|..|+++|.+|.+++
T Consensus 3 k~ilItGat--~~iG~~la~~L~~~g~~v~~~~ 33 (257)
T PRK07074 3 RTALVTGAA--GGIGQALARRFLAAGDRVLALD 33 (257)
T ss_pred CEEEEECCc--chHHHHHHHHHHHCCCEEEEEe
Confidence 468999999 6999999999999999998843
No 128
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=82.38 E-value=2.9 Score=44.94 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=70.0
Q ss_pred eccchhhhHhHHHHHHHHHHHHhcCCeEEEecccccccccccccceeeccCCCCceeEEeeCCcchhhh----------h
Q 009511 386 YNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAV----------V 455 (533)
Q Consensus 386 y~~~~~~~~in~~ie~ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p~~l~vrvv~g~~l~aa~----------v 455 (533)
+..+....-+++-|.+.-++=.+.|+.|+++- ++|+.+ .| +-..++--|+.|..+. .
T Consensus 157 ~~V~~~s~~~g~~l~~l~~~~~~~~~~vi~i~---------r~~~~~---~p-~~~~~l~~gD~l~v~g~~~~l~~~~~~ 223 (453)
T PRK09496 157 VKVYEGSPLVGKPLSDLREHFPDIDVRVVAIF---------RGGRLI---IP-RGDTVIEAGDEVYFIGAREHIRAVMSE 223 (453)
T ss_pred EEeCCCCccCCcCHHHhhhhcCCCceEEEEEE---------ECCEEE---cC-CCCcEecCCCEEEEEeCHHHHHHHHHH
Confidence 34444444555555444322135799998773 244432 36 6677777777776543 2
Q ss_pred hhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 456 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 456 ~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
+.+.+...+.|++.|.. ++|+.+|..|-++|.+|++ .++++.+.++++
T Consensus 224 ~~~~~~~~~~iiIiG~G---~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~ 273 (453)
T PRK09496 224 FGRLEKPVKRVMIVGGG---NIGYYLAKLLEKEGYSVKLIERDPERAEELAEE 273 (453)
T ss_pred hCccCCCCCEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 33333456889999997 9999999999999999998 477777777665
No 129
>PRK05650 short chain dehydrogenase; Provisional
Probab=82.19 E-value=1.9 Score=42.70 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=26.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +-+|+++|..|+++|.+|+.
T Consensus 1 ~~vlVtGas--ggIG~~la~~l~~~g~~V~~ 29 (270)
T PRK05650 1 NRVMITGAA--SGLGRAIALRWAREGWRLAL 29 (270)
T ss_pred CEEEEecCC--ChHHHHHHHHHHHCCCEEEE
Confidence 358999999 69999999999999999988
No 130
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=82.17 E-value=1.7 Score=41.74 Aligned_cols=29 Identities=21% Similarity=0.308 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +=+|+++|..|+++|.+|.+
T Consensus 7 ~~vlItGa~--g~iG~~la~~l~~~g~~v~~ 35 (245)
T PRK12936 7 RKALVTGAS--GGIGEEIARLLHAQGAIVGL 35 (245)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHCCCEEEE
Confidence 579999999 69999999999999999887
No 131
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=82.14 E-value=1.6 Score=41.91 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=27.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.+++||++ +-+|+++|..|+++|.+|+++
T Consensus 6 ~~ilI~Gas--g~iG~~la~~l~~~g~~v~~~ 35 (247)
T PRK05565 6 KVAIVTGAS--GGIGRAIAELLAKEGAKVVIA 35 (247)
T ss_pred CEEEEeCCC--cHHHHHHHHHHHHCCCEEEEE
Confidence 578999999 699999999999999999885
No 132
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=82.04 E-value=2 Score=42.39 Aligned_cols=30 Identities=17% Similarity=0.396 Sum_probs=27.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-|++||++ +=+|++||..|+++|.+|.+.
T Consensus 9 k~vlItGas--~gIG~~ia~~l~~~G~~v~~~ 38 (260)
T PRK08416 9 KTLVISGGT--RGIGKAIVYEFAQSGVNIAFT 38 (260)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEEE
Confidence 678999999 689999999999999999873
No 133
>PRK05875 short chain dehydrogenase; Provisional
Probab=81.71 E-value=2.1 Score=42.39 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=28.6
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
-+.|++||++ +=+|+++|..|+++|.+|..++
T Consensus 7 ~k~vlItGas--g~IG~~la~~l~~~G~~V~~~~ 38 (276)
T PRK05875 7 DRTYLVTGGG--SGIGKGVAAGLVAAGAAVMIVG 38 (276)
T ss_pred CCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEe
Confidence 3789999999 6899999999999999999844
No 134
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=81.70 E-value=2.3 Score=41.98 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=27.6
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.+.|++||++ +.+|++++..|.++|.+|..
T Consensus 17 ~~~ilItGas--G~iG~~l~~~L~~~g~~V~~ 46 (251)
T PLN00141 17 TKTVFVAGAT--GRTGKRIVEQLLAKGFAVKA 46 (251)
T ss_pred CCeEEEECCC--cHHHHHHHHHHHhCCCEEEE
Confidence 4689999999 69999999999999999976
No 135
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=81.68 E-value=1.8 Score=42.05 Aligned_cols=30 Identities=20% Similarity=0.298 Sum_probs=27.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +=+|+++|..||++|.+|+.+
T Consensus 3 k~vlItG~s--g~iG~~la~~L~~~g~~vi~~ 32 (256)
T PRK12745 3 PVALVTGGR--RGIGLGIARALAAAGFDLAIN 32 (256)
T ss_pred cEEEEeCCC--chHHHHHHHHHHHCCCEEEEE
Confidence 568999999 689999999999999999883
No 136
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=81.66 E-value=2.3 Score=41.72 Aligned_cols=29 Identities=28% Similarity=0.425 Sum_probs=27.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|-+++||++ +=+|+++|..|+++|.+|.+
T Consensus 8 k~~lItGas--~gIG~~~a~~l~~~G~~v~~ 36 (255)
T PRK06463 8 KVALITGGT--RGIGRAIAEAFLREGAKVAV 36 (255)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCEEEE
Confidence 679999999 69999999999999999988
No 137
>PRK07069 short chain dehydrogenase; Validated
Probab=81.57 E-value=1.9 Score=41.69 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=26.3
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|++||++ +-+|+++|..|+++|.+|.+.+
T Consensus 2 ilVtG~~--~~iG~~~a~~l~~~G~~v~~~~ 30 (251)
T PRK07069 2 AFITGAA--GGLGRAIARRMAEQGAKVFLTD 30 (251)
T ss_pred EEEECCC--ChHHHHHHHHHHHCCCEEEEEe
Confidence 7899999 6899999999999999998843
No 138
>PRK08226 short chain dehydrogenase; Provisional
Probab=81.56 E-value=1.7 Score=42.66 Aligned_cols=32 Identities=13% Similarity=0.318 Sum_probs=28.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
+.+++||++ +=+|+++|..|+++|.+|+++++
T Consensus 7 ~~~lItG~s--~giG~~la~~l~~~G~~Vv~~~r 38 (263)
T PRK08226 7 KTALITGAL--QGIGEGIARVFARHGANLILLDI 38 (263)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCEEEEecC
Confidence 678999999 68999999999999999998543
No 139
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=81.53 E-value=2.2 Score=41.20 Aligned_cols=30 Identities=20% Similarity=0.333 Sum_probs=27.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.+++||++ +-+|+++|..|.++|.+|.+.
T Consensus 4 ~~ilItGas--~~iG~~la~~l~~~g~~v~~~ 33 (250)
T TIGR03206 4 KTAIVTGGG--GGIGGATCRRFAEEGAKVAVF 33 (250)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCEEEEe
Confidence 578999999 699999999999999999873
No 140
>PRK07035 short chain dehydrogenase; Provisional
Probab=81.32 E-value=2.3 Score=41.44 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=28.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|.|+.||++ +=+|+++|..|.++|.+|++++
T Consensus 9 k~vlItGas--~gIG~~l~~~l~~~G~~Vi~~~ 39 (252)
T PRK07035 9 KIALVTGAS--RGIGEAIAKLLAQQGAHVIVSS 39 (252)
T ss_pred CEEEEECCC--cHHHHHHHHHHHHCCCEEEEEe
Confidence 579999999 6999999999999999999843
No 141
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=81.26 E-value=1.2 Score=49.44 Aligned_cols=82 Identities=11% Similarity=0.187 Sum_probs=48.8
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhh-cccceecc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVLST 519 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~~~~ 519 (533)
+.||+|+.-++...++ -| .+.|++||++ ++|+.|+.+..++..+|++ +.-..---+-+.+.-+. .+.++...
T Consensus 168 v~vv~g~~~~~~~l~~-~~--~d~i~FTGS~---~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~ 241 (493)
T PTZ00381 168 VRVIEGGVEVTTELLK-EP--FDHIFFTGSP---RVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGK 241 (493)
T ss_pred EEEecCCHHHHHHHHh-CC--CCEEEEECCH---HHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHH
Confidence 5567765434444444 24 7899999999 9999999998888888876 11111111111122222 23344444
Q ss_pred cccccCceee
Q 009511 520 SYAAHKTVTM 529 (533)
Q Consensus 520 ~~~~~~~~~~ 529 (533)
-..+||+|.-
T Consensus 242 ~~naGQ~C~A 251 (493)
T PTZ00381 242 FLNAGQTCVA 251 (493)
T ss_pred HhhcCCcCCC
Confidence 4568899863
No 142
>PRK12746 short chain dehydrogenase; Provisional
Probab=81.18 E-value=2.3 Score=41.39 Aligned_cols=29 Identities=28% Similarity=0.346 Sum_probs=27.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +-+|+++|.+|.++|.+|.+
T Consensus 7 ~~ilItGas--g~iG~~la~~l~~~G~~v~i 35 (254)
T PRK12746 7 KVALVTGAS--RGIGRAIAMRLANDGALVAI 35 (254)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEE
Confidence 679999999 69999999999999999976
No 143
>PRK05693 short chain dehydrogenase; Provisional
Probab=81.16 E-value=2.4 Score=42.08 Aligned_cols=30 Identities=23% Similarity=0.340 Sum_probs=27.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +=+|+++|..|+++|.+|+.+
T Consensus 2 k~vlItGas--ggiG~~la~~l~~~G~~V~~~ 31 (274)
T PRK05693 2 PVVLITGCS--SGIGRALADAFKAAGYEVWAT 31 (274)
T ss_pred CEEEEecCC--ChHHHHHHHHHHHCCCEEEEE
Confidence 568999999 689999999999999999983
No 144
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=81.08 E-value=2.3 Score=42.27 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=31.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKL 505 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~ 505 (533)
|.+++||++ +=+|++||..|+++|.+|.+++ .+.-+.+.+
T Consensus 11 k~vlVtGas--~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 52 (278)
T PRK08277 11 KVAVITGGG--GVLGGAMAKELARAGAKVAILDRNQEKAEAVVA 52 (278)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 578999999 5899999999999999999843 334444433
No 145
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=80.93 E-value=2.3 Score=43.65 Aligned_cols=41 Identities=20% Similarity=0.194 Sum_probs=32.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~~ 506 (533)
|.|++||++ +=+|+++|..|+++|.+|++. +.++-+.+.++
T Consensus 7 k~vlVTGas--~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~ 49 (322)
T PRK07453 7 GTVIITGAS--SGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQE 49 (322)
T ss_pred CEEEEEcCC--ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 569999999 689999999999999999984 34444444444
No 146
>PRK06114 short chain dehydrogenase; Provisional
Probab=80.93 E-value=1.9 Score=42.32 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=27.9
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
-|-+++||++ +=+|+++|..|+++|.+|+++
T Consensus 8 ~k~~lVtG~s--~gIG~~ia~~l~~~G~~v~~~ 38 (254)
T PRK06114 8 GQVAFVTGAG--SGIGQRIAIGLAQAGADVALF 38 (254)
T ss_pred CCEEEEECCC--chHHHHHHHHHHHCCCEEEEE
Confidence 3678999999 589999999999999999984
No 147
>PRK08628 short chain dehydrogenase; Provisional
Probab=80.75 E-value=2 Score=42.02 Aligned_cols=31 Identities=16% Similarity=0.270 Sum_probs=27.9
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
-+.+++||++ +-+|+++|..|+++|.+|..+
T Consensus 7 ~~~ilItGas--ggiG~~la~~l~~~G~~v~~~ 37 (258)
T PRK08628 7 DKVVIVTGGA--SGIGAAISLRLAEEGAIPVIF 37 (258)
T ss_pred CCEEEEeCCC--ChHHHHHHHHHHHcCCcEEEE
Confidence 3578999999 689999999999999999883
No 148
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=80.69 E-value=1.9 Score=41.83 Aligned_cols=29 Identities=17% Similarity=0.348 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|-|++||++ +-+|+++|..|+++|.+|++
T Consensus 4 k~~lVtG~s--~giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 4 RIAYVTGGM--GGIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHcCCEEEE
Confidence 568999999 69999999999999999987
No 149
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=80.65 E-value=1.8 Score=43.84 Aligned_cols=29 Identities=24% Similarity=0.248 Sum_probs=27.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +-||+++|.+|.++|.+|..
T Consensus 5 ~~ilVtGat--GfIG~~l~~~L~~~g~~V~~ 33 (322)
T PLN02662 5 KVVCVTGAS--GYIASWLVKLLLQRGYTVKA 33 (322)
T ss_pred CEEEEECCh--HHHHHHHHHHHHHCCCEEEE
Confidence 679999999 79999999999999999976
No 150
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=80.63 E-value=1.8 Score=42.71 Aligned_cols=30 Identities=17% Similarity=0.286 Sum_probs=27.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-|++||++ +-+|+++|..|.++|.+|++.
T Consensus 10 k~vlItG~s--~gIG~~la~~l~~~G~~v~~~ 39 (266)
T PRK06171 10 KIIIVTGGS--SGIGLAIVKELLANGANVVNA 39 (266)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCEEEEE
Confidence 578999999 699999999999999999983
No 151
>PRK06181 short chain dehydrogenase; Provisional
Probab=80.54 E-value=2.5 Score=41.48 Aligned_cols=31 Identities=19% Similarity=0.373 Sum_probs=27.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +-+|+++|..|+++|.+|+.++
T Consensus 2 ~~vlVtGas--g~iG~~la~~l~~~g~~Vi~~~ 32 (263)
T PRK06181 2 KVVIITGAS--EGIGRALAVRLARAGAQLVLAA 32 (263)
T ss_pred CEEEEecCC--cHHHHHHHHHHHHCCCEEEEEe
Confidence 458999999 6999999999999999999843
No 152
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=80.48 E-value=2 Score=45.52 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=30.6
Q ss_pred CcCcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+..-+.|++||++ +-||+++|.+|.++|.+|..++
T Consensus 18 ~~~~~~IlVtGgt--GfIG~~l~~~L~~~G~~V~~v~ 52 (370)
T PLN02695 18 PSEKLRICITGAG--GFIASHIARRLKAEGHYIIASD 52 (370)
T ss_pred CCCCCEEEEECCc--cHHHHHHHHHHHhCCCEEEEEE
Confidence 4455789999999 6999999999999999999854
No 153
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=80.29 E-value=2.7 Score=41.77 Aligned_cols=44 Identities=18% Similarity=0.264 Sum_probs=32.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec-----hhHHHHHhccC
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC-----KDDYEKLKLRI 507 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~-----~~~~~~~~~~~ 507 (533)
|-+++||+++.+=+|+|||..|+++|.+|++.. .++-++++++.
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~ 56 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL 56 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc
Confidence 678999987213699999999999999999842 23455555443
No 154
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=80.15 E-value=1.8 Score=41.59 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=28.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
|.+++||++ +=+|+++|..|+++|.+|+..++
T Consensus 6 k~~lVtGas--~~iG~~ia~~l~~~G~~v~~~~r 37 (235)
T PRK06550 6 KTVLITGAA--SGIGLAQARAFLAQGAQVYGVDK 37 (235)
T ss_pred CEEEEcCCC--chHHHHHHHHHHHCCCEEEEEeC
Confidence 678999999 69999999999999999988544
No 155
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=80.11 E-value=2.7 Score=40.63 Aligned_cols=31 Identities=26% Similarity=0.457 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+-|++||++ +-+|+++|..|+++|.+|+.++
T Consensus 8 ~~vlVtG~s--g~iG~~l~~~L~~~G~~Vi~~~ 38 (239)
T PRK07666 8 KNALITGAG--RGIGRAVAIALAKEGVNVGLLA 38 (239)
T ss_pred CEEEEEcCC--chHHHHHHHHHHHCCCEEEEEe
Confidence 568999999 6999999999999999998833
No 156
>PLN02583 cinnamoyl-CoA reductase
Probab=80.06 E-value=2.3 Score=43.28 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=28.5
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
.-+.|++||++ +-+|++++..|.++|.+|..+
T Consensus 5 ~~k~vlVTGat--G~IG~~lv~~Ll~~G~~V~~~ 36 (297)
T PLN02583 5 SSKSVCVMDAS--GYVGFWLVKRLLSRGYTVHAA 36 (297)
T ss_pred CCCEEEEECCC--CHHHHHHHHHHHhCCCEEEEE
Confidence 34679999999 699999999999999999873
No 157
>PRK06138 short chain dehydrogenase; Provisional
Probab=80.01 E-value=2.6 Score=40.86 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=27.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.+++||++ +-+|+++|..|.++|.+|+++
T Consensus 6 k~~lItG~s--g~iG~~la~~l~~~G~~v~~~ 35 (252)
T PRK06138 6 RVAIVTGAG--SGIGRATAKLFAREGARVVVA 35 (252)
T ss_pred cEEEEeCCC--chHHHHHHHHHHHCCCeEEEe
Confidence 578999999 699999999999999999883
No 158
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=79.96 E-value=1.5 Score=45.87 Aligned_cols=55 Identities=22% Similarity=0.193 Sum_probs=39.1
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccCCh--hhcccceecccc
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EAQHNLVLSTSY 521 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~~~--~~~~~l~~~~~~ 521 (533)
-|+.||+. |=+||++|+-+.|||-++.+ ++++-.+.-.+++.. +...|-+.++++
T Consensus 40 ~vLITGgg--~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~ 98 (300)
T KOG1201|consen 40 IVLITGGG--SGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDR 98 (300)
T ss_pred EEEEeCCC--chHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCH
Confidence 58999999 68999999999999998877 555555544444322 444455566654
No 159
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=79.90 E-value=2.3 Score=41.36 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=30.5
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEe-ec---hhHHHHHhc
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVAT-IC---KDDYEKLKL 505 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~---~~~~~~~~~ 505 (533)
|+++|+| +++|+.|+.+|-++|.+|.. ++ ++..++++.
T Consensus 1 I~V~Gat--G~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~ 42 (233)
T PF05368_consen 1 ILVTGAT--GNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA 42 (233)
T ss_dssp EEEETTT--SHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH
T ss_pred CEEECCc--cHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc
Confidence 6899999 69999999999999999988 33 344555554
No 160
>PRK08618 ornithine cyclodeaminase; Validated
Probab=79.72 E-value=6.9 Score=41.02 Aligned_cols=97 Identities=18% Similarity=0.170 Sum_probs=64.7
Q ss_pred HhcCCeEEEecccccccccc-cccceeeccCCCCceeEEeeCCcchh-------hhhhhcC-CcCcceEEEeccccchhh
Q 009511 407 DAKGVKVISLGLLNQGEELN-RNGEIYLERQPNKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 477 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln-~~g~l~~~~~p~~l~vrvv~g~~l~a-------a~v~~~i-p~~~~~v~l~g~~~~~k~ 477 (533)
+-.|+|+++.--=|..+.|- -.|.+.+.--.+..-+=++||+.||+ |+...-+ +++.+.|.+.|+. ..
T Consensus 62 ~~~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~ 138 (325)
T PRK08618 62 EALGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQ 138 (325)
T ss_pred CeEEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HH
Confidence 34699999875555433332 33555554433577788999999974 3344556 6799999999998 89
Q ss_pred HHHHHHHhh-hcCcEEEe---echhHHHHHhcc
Q 009511 478 ANAVASSLC-QMGIKVAT---ICKDDYEKLKLR 506 (533)
Q Consensus 478 ~~aia~~lc-~~~~~v~~---~~~~~~~~~~~~ 506 (533)
|++++.++| .+|++-+. -++|+=+++.++
T Consensus 139 a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~ 171 (325)
T PRK08618 139 AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQE 171 (325)
T ss_pred HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHH
Confidence 999999888 46765544 344554544443
No 161
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=79.66 E-value=3.3 Score=39.80 Aligned_cols=62 Identities=16% Similarity=0.263 Sum_probs=40.4
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc-------------CC----hhhcccceecccccccCc
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-------------IP----VEAQHNLVLSTSYAAHKT 526 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~-------------~~----~~~~~~l~~~~~~~~~~~ 526 (533)
|-..|+. .+|+.||..+++.|.+|.+ .+.+.-++.+++ .. ....+++...+.+.++.+
T Consensus 2 V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~~ 78 (180)
T PF02737_consen 2 VAVIGAG---TMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAVD 78 (180)
T ss_dssp EEEES-S---HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGCT
T ss_pred EEEEcCC---HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHhh
Confidence 5667887 8999999999999999999 555544333222 12 122233334557887778
Q ss_pred eeeE
Q 009511 527 VTMV 530 (533)
Q Consensus 527 ~~~~ 530 (533)
|.+|
T Consensus 79 adlV 82 (180)
T PF02737_consen 79 ADLV 82 (180)
T ss_dssp ESEE
T ss_pred hhee
Confidence 8876
No 162
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=79.60 E-value=2.8 Score=40.66 Aligned_cols=29 Identities=24% Similarity=0.426 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.+++||++ +=+|+++|..|+++|.+|++
T Consensus 6 k~ilItGas--~gIG~~la~~l~~~G~~vv~ 34 (253)
T PRK08642 6 QTVLVTGGS--RGLGAAIARAFAREGARVVV 34 (253)
T ss_pred CEEEEeCCC--CcHHHHHHHHHHHCCCeEEE
Confidence 579999999 68999999999999999987
No 163
>PRK06141 ornithine cyclodeaminase; Validated
Probab=79.59 E-value=7.2 Score=40.71 Aligned_cols=98 Identities=22% Similarity=0.215 Sum_probs=65.2
Q ss_pred HhcCCeEEEeccccccccccc-ccceeeccCCCCceeEEeeCCcchh-------hhhhhcC-CcCcceEEEeccccchhh
Q 009511 407 DAKGVKVISLGLLNQGEELNR-NGEIYLERQPNKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 477 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln~-~g~l~~~~~p~~l~vrvv~g~~l~a-------a~v~~~i-p~~~~~v~l~g~~~~~k~ 477 (533)
+-.|+|+++.--=|....|-. .|.+.+.---+..-.=++||+.||+ |+..+-+ +++.+.|.+.|+. ..
T Consensus 60 ~~~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~G---~~ 136 (314)
T PRK06141 60 RYIGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGTG---RL 136 (314)
T ss_pred CeeEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECCc---HH
Confidence 346999999766565444422 3555554333466778899999974 2333334 6789999999987 99
Q ss_pred HHHHHHHhhh-cC-cEEEe--echhHHHHHhccC
Q 009511 478 ANAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRI 507 (533)
Q Consensus 478 ~~aia~~lc~-~~-~~v~~--~~~~~~~~~~~~~ 507 (533)
|++++.++|. ++ -+|.+ -+.++=+++.++.
T Consensus 137 a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~ 170 (314)
T PRK06141 137 ASLLALAHASVRPIKQVRVWGRDPAKAEALAAEL 170 (314)
T ss_pred HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 9999998885 55 55777 3345555555443
No 164
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=79.55 E-value=2.3 Score=42.03 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=27.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|-|+.||+++.+=+|+|+|..|+++|.+|++.+
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~ 40 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTY 40 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEec
Confidence 678999998201599999999999999999843
No 165
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=79.54 E-value=2 Score=41.39 Aligned_cols=28 Identities=25% Similarity=0.458 Sum_probs=25.5
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|++||++ +=+|+++|..|+++|.+|+++
T Consensus 1 vlItGas--~giG~~~a~~l~~~G~~v~~~ 28 (239)
T TIGR01831 1 VLVTGAS--RGIGRAIANRLAADGFEICVH 28 (239)
T ss_pred CEEeCCC--chHHHHHHHHHHHCCCEEEEE
Confidence 5899999 689999999999999999873
No 166
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=79.52 E-value=2.2 Score=42.38 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|+.||+++.+=+|+|+|..|+++|.+|++.
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~ 38 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQGAELAFT 38 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence 57899998431469999999999999999883
No 167
>PRK07831 short chain dehydrogenase; Provisional
Probab=79.47 E-value=2.7 Score=41.42 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||+++ +=+|+++|..|+++|.+|++.
T Consensus 18 k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~ 48 (262)
T PRK07831 18 KVVLVTAAAG-TGIGSATARRALEEGARVVIS 48 (262)
T ss_pred CEEEEECCCc-ccHHHHHHHHHHHcCCEEEEE
Confidence 6799999982 249999999999999999983
No 168
>PRK06484 short chain dehydrogenase; Validated
Probab=79.33 E-value=2.8 Score=45.77 Aligned_cols=43 Identities=21% Similarity=0.263 Sum_probs=34.0
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhcc
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLR 506 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~~ 506 (533)
.-|.++.||++ +-+|+++|..|+++|.+|+++ ++++-+++.++
T Consensus 268 ~~k~~lItGas--~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 312 (520)
T PRK06484 268 SPRVVAITGGA--RGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEA 312 (520)
T ss_pred CCCEEEEECCC--cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 44789999999 689999999999999999993 34455555444
No 169
>PRK06128 oxidoreductase; Provisional
Probab=79.26 E-value=2.6 Score=42.84 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=27.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.|++||++ +=+|+++|..|+++|.+|++
T Consensus 56 k~vlITGas--~gIG~~~a~~l~~~G~~V~i 84 (300)
T PRK06128 56 RKALITGAD--SGIGRATAIAFAREGADIAL 84 (300)
T ss_pred CEEEEecCC--CcHHHHHHHHHHHcCCEEEE
Confidence 679999999 69999999999999999987
No 170
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=79.21 E-value=2.1 Score=46.64 Aligned_cols=30 Identities=27% Similarity=0.406 Sum_probs=27.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +-+|+++|..|+++|.+|+.+
T Consensus 179 K~VLITGAS--gGIG~aLA~~La~~G~~Vi~l 208 (406)
T PRK07424 179 KTVAVTGAS--GTLGQALLKELHQQGAKVVAL 208 (406)
T ss_pred CEEEEeCCC--CHHHHHHHHHHHHCCCEEEEE
Confidence 678999999 699999999999999999873
No 171
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=79.01 E-value=2.1 Score=40.88 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=26.0
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|++||++ +-+|+++|..|+++|.+|.+++
T Consensus 1 vlItG~~--g~iG~~la~~l~~~G~~v~~~~ 29 (239)
T TIGR01830 1 ALVTGAS--RGIGRAIALKLAKEGAKVIITY 29 (239)
T ss_pred CEEECCC--cHHHHHHHHHHHHCCCEEEEEe
Confidence 5789999 6899999999999999998843
No 172
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=78.91 E-value=2.6 Score=41.77 Aligned_cols=30 Identities=20% Similarity=0.412 Sum_probs=27.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|+.||++ +=+|+++|..|+++|.+|+++
T Consensus 2 ~~~lITGas--~gIG~~~a~~l~~~G~~V~~~ 31 (267)
T TIGR02685 2 PAAVVTGAA--KRIGSSIAVALHQEGYRVVLH 31 (267)
T ss_pred CEEEEeCCC--CcHHHHHHHHHHhCCCeEEEE
Confidence 468999999 579999999999999999983
No 173
>PRK07832 short chain dehydrogenase; Provisional
Probab=78.90 E-value=3 Score=41.47 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.+++||++ +=+|+++|..|+++|.+|+++
T Consensus 1 k~vlItGas--~giG~~la~~la~~G~~vv~~ 30 (272)
T PRK07832 1 KRCFVTGAA--SGIGRATALRLAAQGAELFLT 30 (272)
T ss_pred CEEEEeCCC--CHHHHHHHHHHHHCCCEEEEE
Confidence 358999999 689999999999999999883
No 174
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=78.75 E-value=1.7 Score=48.45 Aligned_cols=48 Identities=13% Similarity=0.310 Sum_probs=36.9
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.||+|..-+.+..+. ++++.|++||++ .+|+.|+....++..+|.+
T Consensus 170 vv~vv~G~~~~~~~l~~---~~vd~V~FTGS~---~~G~~I~~~aa~~l~~v~L 217 (484)
T PLN02174 170 AVRVVEGAVTETTALLE---QKWDKIFYTGSS---KIGRVIMAAAAKHLTPVVL 217 (484)
T ss_pred EEEEEECChHHHHHHhc---ccCCEEEEECCh---HHHHHHHHHHHhcCCcEEE
Confidence 45677775433344443 578999999999 9999999998888888888
No 175
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=78.69 E-value=3.4 Score=41.16 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||+++.+=+|+|+|..|+++|.+|.+.
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~ 38 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREGAELAFT 38 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEE
Confidence 67899997421469999999999999999884
No 176
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=78.68 E-value=3.1 Score=41.28 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=27.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-|+.||+++.+=+|++||..|+++|.+|.+.
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~ 38 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAGAELGIT 38 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEE
Confidence 67899998621479999999999999999873
No 177
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=78.54 E-value=2.2 Score=43.56 Aligned_cols=29 Identities=21% Similarity=0.214 Sum_probs=27.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +-+|++++..|.++|.+|..
T Consensus 6 ~~vlVTGat--G~iG~~l~~~L~~~g~~V~~ 34 (322)
T PLN02986 6 KLVCVTGAS--GYIASWIVKLLLLRGYTVKA 34 (322)
T ss_pred CEEEEECCC--cHHHHHHHHHHHHCCCEEEE
Confidence 689999999 69999999999999999975
No 178
>PRK07576 short chain dehydrogenase; Provisional
Probab=78.51 E-value=3.1 Score=41.27 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=28.9
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.-|.|++||++ +-||+++|..|+++|.+|..++
T Consensus 8 ~~k~ilItGas--ggIG~~la~~l~~~G~~V~~~~ 40 (264)
T PRK07576 8 AGKNVVVVGGT--SGINLGIAQAFARAGANVAVAS 40 (264)
T ss_pred CCCEEEEECCC--chHHHHHHHHHHHCCCEEEEEe
Confidence 34679999999 6999999999999999998843
No 179
>PRK06046 alanine dehydrogenase; Validated
Probab=78.50 E-value=8.4 Score=40.45 Aligned_cols=97 Identities=24% Similarity=0.299 Sum_probs=65.4
Q ss_pred HhcCCeEEEecccccccccccc-cceeeccCC-CCceeEEeeCCcchh-------hhhhhcC-CcCcceEEEeccccchh
Q 009511 407 DAKGVKVISLGLLNQGEELNRN-GEIYLERQP-NKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANK 476 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln~~-g~l~~~~~p-~~l~vrvv~g~~l~a-------a~v~~~i-p~~~~~v~l~g~~~~~k 476 (533)
+..|+|+++.--=|-++.|... |...+. +| +..-.=++||+.||+ |+-..-+ |++.+.|.+.|+. .
T Consensus 64 ~~~g~K~~~~~p~N~~~glp~~~g~i~L~-d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~ 139 (326)
T PRK06046 64 DIAGVKIVNVHPGNPDRGLPTVMAVIILN-SPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---N 139 (326)
T ss_pred CeEEEEEEeeCCCCcccCCCceeEEEEEE-eCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---H
Confidence 4579999987655654444332 444433 33 366677899999974 2223445 7899999999998 8
Q ss_pred hHHHHHHHhh-hcCcEEEe---echhHHHHHhccC
Q 009511 477 VANAVASSLC-QMGIKVAT---ICKDDYEKLKLRI 507 (533)
Q Consensus 477 ~~~aia~~lc-~~~~~v~~---~~~~~~~~~~~~~ 507 (533)
.|++.+.+|+ .++++.+. .++++-+++.++.
T Consensus 140 qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~ 174 (326)
T PRK06046 140 QARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERM 174 (326)
T ss_pred HHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHH
Confidence 8999999998 56777666 4445555555544
No 180
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=78.47 E-value=2.4 Score=43.72 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=27.0
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcE-EEeec
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VATIC 496 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~-v~~~~ 496 (533)
.-|.|+++|+. -.|||||.+|.+.|++ |.+.+
T Consensus 125 ~~k~vlI~GAG---GagrAia~~La~~G~~~V~I~~ 157 (289)
T PRK12548 125 KGKKLTVIGAG---GAATAIQVQCALDGAKEITIFN 157 (289)
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHCCCCEEEEEe
Confidence 34789999996 7899999999999997 87743
No 181
>PRK07806 short chain dehydrogenase; Provisional
Probab=78.47 E-value=2.6 Score=40.86 Aligned_cols=29 Identities=21% Similarity=0.320 Sum_probs=27.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +-+|+++|..|.++|.+|.+
T Consensus 7 k~vlItGas--ggiG~~l~~~l~~~G~~V~~ 35 (248)
T PRK07806 7 KTALVTGSS--RGIGADTAKILAGAGAHVVV 35 (248)
T ss_pred cEEEEECCC--CcHHHHHHHHHHHCCCEEEE
Confidence 679999999 69999999999999999987
No 182
>PRK12743 oxidoreductase; Provisional
Probab=78.04 E-value=3.3 Score=40.69 Aligned_cols=29 Identities=17% Similarity=0.272 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.|++||++ +=||+++|..|+++|.+|.+
T Consensus 3 k~vlItGas--~giG~~~a~~l~~~G~~V~~ 31 (256)
T PRK12743 3 QVAIVTASD--SGIGKACALLLAQQGFDIGI 31 (256)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEE
Confidence 578999999 68999999999999999987
No 183
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=77.98 E-value=2.8 Score=40.61 Aligned_cols=29 Identities=24% Similarity=0.405 Sum_probs=27.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+++||++ +=||+++|..|.++|.+|++
T Consensus 7 ~~~lItG~s--~~iG~~la~~l~~~g~~v~~ 35 (247)
T PRK12935 7 KVAIVTGGA--KGIGKAITVALAQEGAKVVI 35 (247)
T ss_pred CEEEEECCC--CHHHHHHHHHHHHcCCEEEE
Confidence 679999999 69999999999999999987
No 184
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=77.92 E-value=3.3 Score=40.34 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=27.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-|++||++ +=+|+++|..|.++|.+|.+.
T Consensus 8 ~~vlItGas--g~iG~~la~~l~~~G~~v~~~ 37 (262)
T PRK13394 8 KTAVVTGAA--SGIGKEIALELARAGAAVAIA 37 (262)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHCCCeEEEE
Confidence 679999999 589999999999999999983
No 185
>PRK08303 short chain dehydrogenase; Provisional
Probab=77.87 E-value=2.4 Score=43.66 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=27.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|-|++||++ +=+|+|+|..|+++|.+|++.+
T Consensus 9 k~~lITGgs--~GIG~aia~~la~~G~~Vv~~~ 39 (305)
T PRK08303 9 KVALVAGAT--RGAGRGIAVELGAAGATVYVTG 39 (305)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEEEe
Confidence 678999999 5799999999999999999843
No 186
>PRK12747 short chain dehydrogenase; Provisional
Probab=77.73 E-value=2.9 Score=40.78 Aligned_cols=29 Identities=28% Similarity=0.363 Sum_probs=27.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.+++||++ +=+|+++|..|+++|.+|.+
T Consensus 5 k~~lItGas--~gIG~~ia~~l~~~G~~v~~ 33 (252)
T PRK12747 5 KVALVTGAS--RGIGRAIAKRLANDGALVAI 33 (252)
T ss_pred CEEEEeCCC--ChHHHHHHHHHHHCCCeEEE
Confidence 578999999 68999999999999999987
No 187
>PRK09242 tropinone reductase; Provisional
Probab=77.70 E-value=3.4 Score=40.42 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=27.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.+++||++ +=+|+++|..|+++|.+|+++
T Consensus 10 k~~lItGa~--~gIG~~~a~~l~~~G~~v~~~ 39 (257)
T PRK09242 10 QTALITGAS--KGIGLAIAREFLGLGADVLIV 39 (257)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHcCCEEEEE
Confidence 678999999 689999999999999999983
No 188
>PRK07814 short chain dehydrogenase; Provisional
Probab=77.63 E-value=3.4 Score=40.81 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=28.2
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
-+-|++||++ +=+|+++|..|.++|.+|++++
T Consensus 10 ~~~vlItGas--ggIG~~~a~~l~~~G~~Vi~~~ 41 (263)
T PRK07814 10 DQVAVVTGAG--RGLGAAIALAFAEAGADVLIAA 41 (263)
T ss_pred CCEEEEECCC--ChHHHHHHHHHHHCCCEEEEEe
Confidence 3679999999 5899999999999999998833
No 189
>PRK12367 short chain dehydrogenase; Provisional
Probab=77.52 E-value=2.5 Score=42.12 Aligned_cols=31 Identities=16% Similarity=0.300 Sum_probs=28.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.+++||++ +=+|+++|..|.++|.+|++++
T Consensus 15 k~~lITGas--~gIG~ala~~l~~~G~~Vi~~~ 45 (245)
T PRK12367 15 KRIGITGAS--GALGKALTKAFRAKGAKVIGLT 45 (245)
T ss_pred CEEEEEcCC--cHHHHHHHHHHHHCCCEEEEEE
Confidence 679999999 6999999999999999998843
No 190
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=77.39 E-value=3.6 Score=39.98 Aligned_cols=30 Identities=23% Similarity=0.380 Sum_probs=27.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +=+|+++|..|+++|.+|+++
T Consensus 1 k~~lItG~s--g~iG~~la~~l~~~G~~v~~~ 30 (254)
T TIGR02415 1 KVALVTGGA--QGIGKGIAERLAKDGFAVAVA 30 (254)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEEE
Confidence 468999999 699999999999999999883
No 191
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=77.13 E-value=2.8 Score=43.71 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=34.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
|-|+.|||. |=+|.++|..|.++|.+++. -+++|.|++++|
T Consensus 13 kvVvITGAS--sGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~ 55 (282)
T KOG1205|consen 13 KVVLITGAS--SGIGEALAYELAKRGAKLVLVARRARRLERVAEE 55 (282)
T ss_pred CEEEEeCCC--cHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHH
Confidence 568999999 68999999999999997555 578888888554
No 192
>PRK06172 short chain dehydrogenase; Provisional
Probab=77.03 E-value=3.7 Score=40.05 Aligned_cols=30 Identities=23% Similarity=0.323 Sum_probs=27.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|++||++ +=+|+++|..|+++|.+|+.+
T Consensus 8 k~ilItGas--~~iG~~ia~~l~~~G~~v~~~ 37 (253)
T PRK06172 8 KVALVTGGA--AGIGRATALAFAREGAKVVVA 37 (253)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHcCCEEEEE
Confidence 679999999 689999999999999999983
No 193
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=76.91 E-value=3.7 Score=40.20 Aligned_cols=31 Identities=13% Similarity=0.262 Sum_probs=28.3
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
-|.|++||++ +-+|+++|..|+++|.+|++.
T Consensus 11 ~k~vlVtG~s--~gIG~~la~~l~~~G~~vv~~ 41 (255)
T PRK06113 11 GKCAIITGAG--AGIGKEIAITFATAGASVVVS 41 (255)
T ss_pred CCEEEEECCC--chHHHHHHHHHHHCCCeEEEE
Confidence 4789999999 699999999999999999883
No 194
>PLN02650 dihydroflavonol-4-reductase
Probab=76.90 E-value=2.7 Score=43.52 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=27.9
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+-+.|++||++ +-+|++++..|.++|.+|..
T Consensus 4 ~~k~iLVTGat--GfIGs~l~~~L~~~G~~V~~ 34 (351)
T PLN02650 4 QKETVCVTGAS--GFIGSWLVMRLLERGYTVRA 34 (351)
T ss_pred CCCEEEEeCCc--HHHHHHHHHHHHHCCCEEEE
Confidence 34579999999 79999999999999999986
No 195
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=76.77 E-value=3.7 Score=41.97 Aligned_cols=58 Identities=21% Similarity=0.263 Sum_probs=39.4
Q ss_pred eCCcchhhhhh-hcCCcCcceEEEeccccchhhHHHHHHHhhhcC-cEEEee--chhHHHHHhcc
Q 009511 446 DGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVATI--CKDDYEKLKLR 506 (533)
Q Consensus 446 ~g~~l~aa~v~-~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~-~~v~~~--~~~~~~~~~~~ 506 (533)
||....++.-- ..+...-+.|++.|+. .+|||+|.+|+++| -+|.+. +.++-+++.++
T Consensus 105 D~~G~~~~l~~~~~~~~~~k~vlVlGaG---g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~ 166 (278)
T PRK00258 105 DGIGFVRALEERLGVDLKGKRILILGAG---GAARAVILPLLDLGVAEITIVNRTVERAEELAKL 166 (278)
T ss_pred cHHHHHHHHHhccCCCCCCCEEEEEcCc---HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 55555555532 1233445789999986 89999999999999 578883 34555666554
No 196
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=76.39 E-value=3 Score=41.43 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=26.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-+++||+++.+=+|+|+|..|.++|.+|++.
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~ 40 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFT 40 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEE
Confidence 56899999931139999999999999999983
No 197
>PRK07340 ornithine cyclodeaminase; Validated
Probab=76.34 E-value=8.5 Score=40.10 Aligned_cols=96 Identities=17% Similarity=0.232 Sum_probs=64.8
Q ss_pred hcCCeEEEeccccccccccc-ccceeeccCCCCceeEEeeCCcchh-------hhhhhcC-CcCcceEEEeccccchhhH
Q 009511 408 AKGVKVISLGLLNQGEELNR-NGEIYLERQPNKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (533)
Q Consensus 408 ~~g~kv~slg~ln~~~~ln~-~g~l~~~~~p~~l~vrvv~g~~l~a-------a~v~~~i-p~~~~~v~l~g~~~~~k~~ 478 (533)
..|+|+++.--=|..+.|.. .|.+.+.---+..-.=++||+.||+ |+-.+-+ +++.+.|.+.|+. ..|
T Consensus 61 ~~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa 137 (304)
T PRK07340 61 LAITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQA 137 (304)
T ss_pred ccEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 46999998765565554433 3444444333477788999999974 3444555 6799999999998 999
Q ss_pred HHHHHHhhh-cCcE-EEe--echhHHHHHhcc
Q 009511 479 NAVASSLCQ-MGIK-VAT--ICKDDYEKLKLR 506 (533)
Q Consensus 479 ~aia~~lc~-~~~~-v~~--~~~~~~~~~~~~ 506 (533)
++.+.++|+ ++++ |.+ -+.++=+++..+
T Consensus 138 ~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~ 169 (304)
T PRK07340 138 RAHLEAFAAGLPVRRVWVRGRTAASAAAFCAH 169 (304)
T ss_pred HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH
Confidence 999999995 6754 555 333443444433
No 198
>PRK07041 short chain dehydrogenase; Provisional
Probab=76.25 E-value=3 Score=40.00 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=24.9
Q ss_pred EEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 467 LLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 467 ~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
++||++ +-+|+++|..|+++|.+|++++
T Consensus 1 lItGas--~~iG~~~a~~l~~~G~~v~~~~ 28 (230)
T PRK07041 1 LVVGGS--SGIGLALARAFAAEGARVTIAS 28 (230)
T ss_pred CeecCC--ChHHHHHHHHHHHCCCEEEEEe
Confidence 479999 6999999999999999998843
No 199
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=76.06 E-value=3.9 Score=41.86 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=28.4
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+-|-+++||++ +=+|+++|..|+++|.+|++.
T Consensus 11 ~~k~~lVTGas--~gIG~~ia~~L~~~Ga~Vv~~ 42 (306)
T PRK07792 11 SGKVAVVTGAA--AGLGRAEALGLARLGATVVVN 42 (306)
T ss_pred CCCEEEEECCC--ChHHHHHHHHHHHCCCEEEEe
Confidence 34679999999 589999999999999999983
No 200
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=76.02 E-value=2.9 Score=41.73 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=26.7
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|++||++ +.||++++..|.++|.+|..++
T Consensus 3 ILVtG~t--GfiG~~l~~~L~~~g~~V~~~~ 31 (314)
T COG0451 3 ILVTGGA--GFIGSHLVERLLAAGHDVRGLD 31 (314)
T ss_pred EEEEcCc--ccHHHHHHHHHHhCCCeEEEEe
Confidence 8999998 6999999999999999999843
No 201
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=75.93 E-value=3.3 Score=43.18 Aligned_cols=40 Identities=15% Similarity=0.224 Sum_probs=30.8
Q ss_pred cceEEEeccc-cchhhHHHHHHHhhhcCcEEEe-echhHHHHH
Q 009511 463 TAHVLLRGTV-TANKVANAVASSLCQMGIKVAT-ICKDDYEKL 503 (533)
Q Consensus 463 ~~~v~l~g~~-~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~ 503 (533)
-|-++.||+. | +=+|+|+|..|++.|.+|++ .+.++-+.+
T Consensus 9 gk~alITGa~~s-~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~ 50 (303)
T PLN02730 9 GKRAFIAGVADD-NGYGWAIAKALAAAGAEILVGTWVPALNIF 50 (303)
T ss_pred CCEEEEeCCCCC-CcHHHHHHHHHHHCCCEEEEEeCcchhhHH
Confidence 4678999993 2 58999999999999999998 343444433
No 202
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=75.91 E-value=3.4 Score=44.22 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=32.8
Q ss_pred hhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 456 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 456 ~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
..+.+..-+.|++||++ +.+|++++..|.++|.+|..+++
T Consensus 53 ~~~~~~~~~kVLVtGat--G~IG~~l~~~Ll~~G~~V~~l~R 92 (390)
T PLN02657 53 FRSKEPKDVTVLVVGAT--GYIGKFVVRELVRRGYNVVAVAR 92 (390)
T ss_pred ccccCCCCCEEEEECCC--cHHHHHHHHHHHHCCCEEEEEEe
Confidence 33455555679999999 69999999999999999988443
No 203
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=75.90 E-value=3.5 Score=40.04 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=27.9
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.-+.|++||++ +=+|+++|..|.++|-+|++
T Consensus 4 ~~~~ilITGas--~GiG~aia~~l~~~G~~v~~ 34 (251)
T COG1028 4 SGKVALVTGAS--SGIGRAIARALAREGARVVV 34 (251)
T ss_pred CCCEEEEeCCC--CHHHHHHHHHHHHCCCeEEE
Confidence 45679999999 68999999999999999777
No 204
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=75.80 E-value=4.2 Score=41.56 Aligned_cols=66 Identities=20% Similarity=0.192 Sum_probs=45.0
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc-------------CChhhc----ccceecccccc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-------------IPVEAQ----HNLVLSTSYAA 523 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~-------------~~~~~~----~~l~~~~~~~~ 523 (533)
.++|-+.|+. -+|.+||..|+++|.+|.+ .+.+.-++++++ .+.+.. .++.-.+.+++
T Consensus 4 ~~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 80 (292)
T PRK07530 4 IKKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDLED 80 (292)
T ss_pred CCEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCHHH
Confidence 3578899998 8999999999999999999 555655554322 222211 22333447777
Q ss_pred cCceeeEe
Q 009511 524 HKTVTMVT 531 (533)
Q Consensus 524 ~~~~~~~~ 531 (533)
.++|.+|.
T Consensus 81 ~~~aD~Vi 88 (292)
T PRK07530 81 LADCDLVI 88 (292)
T ss_pred hcCCCEEE
Confidence 77888764
No 205
>PRK06484 short chain dehydrogenase; Validated
Probab=75.72 E-value=3.5 Score=45.08 Aligned_cols=42 Identities=14% Similarity=0.184 Sum_probs=33.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccC
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~ 507 (533)
|-|++||++ +=+|+++|..|.++|.+|.. -+.++.+.+.++.
T Consensus 6 k~~lITGas--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (520)
T PRK06484 6 RVVLVTGAA--GGIGRAACQRFARAGDQVVVADRNVERARERADSL 49 (520)
T ss_pred eEEEEECCC--cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 678999999 58999999999999999988 3455555555544
No 206
>PRK09134 short chain dehydrogenase; Provisional
Probab=75.65 E-value=4.2 Score=39.89 Aligned_cols=30 Identities=27% Similarity=0.465 Sum_probs=27.4
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.|++||++ +-+|+++|..|+++|.+|++
T Consensus 9 ~k~vlItGas--~giG~~la~~l~~~g~~v~~ 38 (258)
T PRK09134 9 PRAALVTGAA--RRIGRAIALDLAAHGFDVAV 38 (258)
T ss_pred CCEEEEeCCC--cHHHHHHHHHHHHCCCEEEE
Confidence 3579999999 69999999999999999977
No 207
>PRK06701 short chain dehydrogenase; Provisional
Probab=75.56 E-value=3.4 Score=42.01 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=27.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +=||+++|..|+++|.+|.+.
T Consensus 47 k~iLItGas--ggIG~~la~~l~~~G~~V~l~ 76 (290)
T PRK06701 47 KVALITGGD--SGIGRAVAVLFAKEGADIAIV 76 (290)
T ss_pred CEEEEeCCC--cHHHHHHHHHHHHCCCEEEEE
Confidence 569999999 589999999999999999884
No 208
>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae. Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related
Probab=75.56 E-value=23 Score=34.84 Aligned_cols=21 Identities=24% Similarity=0.366 Sum_probs=15.2
Q ss_pred ccccCCchhhhHhhhcCCCCc
Q 009511 240 KFLMYTPSYHSLHHTQFRTNY 260 (533)
Q Consensus 240 k~li~Tp~~H~lHH~~~~~NY 260 (533)
.++...-.+|..||...+..+
T Consensus 168 ~~l~~~~nyH~~HHL~P~IP~ 188 (207)
T cd03514 168 NPLIMGQNYHLVHHLWPSIPW 188 (207)
T ss_pred heeecCCchhHHHhCCCCCch
Confidence 555556679999999876444
No 209
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=75.54 E-value=4.1 Score=41.95 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=31.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcC-cEEEeec--hhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMG-IKVATIC--KDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~-~~v~~~~--~~~~~~~~~~ 506 (533)
+.|++||++ +=+|+++|..|+++| .+|++.+ +++=+.+.++
T Consensus 4 k~vlITGas--~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~ 47 (314)
T TIGR01289 4 PTVIITGAS--SGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKS 47 (314)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 468999999 579999999999999 9998833 3333444433
No 210
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=75.43 E-value=4.4 Score=40.75 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=27.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|+.||+++.+=+|+|||..|+++|.+|++.
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~ 42 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAGAELAFT 42 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence 67899999721469999999999999999884
No 211
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=75.33 E-value=2.7 Score=42.02 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=25.0
Q ss_pred EEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 467 LLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 467 ~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|+|+..| +|+|+++|.+|+++|.+|..++
T Consensus 19 ~itN~SS-G~iG~aLA~~L~~~G~~V~li~ 47 (229)
T PRK06732 19 GITNHST-GQLGKIIAETFLAAGHEVTLVT 47 (229)
T ss_pred eecCccc-hHHHHHHHHHHHhCCCEEEEEE
Confidence 6676666 6999999999999999999854
No 212
>PLN02686 cinnamoyl-CoA reductase
Probab=75.14 E-value=4.9 Score=42.47 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=28.7
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
..-|.|++||++ +-+|++++..|.++|.+|..
T Consensus 51 ~~~k~VLVTGat--GfIG~~lv~~L~~~G~~V~~ 82 (367)
T PLN02686 51 AEARLVCVTGGV--SFLGLAIVDRLLRHGYSVRI 82 (367)
T ss_pred CCCCEEEEECCc--hHHHHHHHHHHHHCCCEEEE
Confidence 345789999999 69999999999999999976
No 213
>PRK08219 short chain dehydrogenase; Provisional
Probab=75.09 E-value=3.9 Score=38.84 Aligned_cols=30 Identities=17% Similarity=0.199 Sum_probs=26.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +-+|+++|..|+++ .+|..++
T Consensus 4 ~~vlVtG~~--g~iG~~l~~~l~~~-~~V~~~~ 33 (227)
T PRK08219 4 PTALITGAS--RGIGAAIARELAPT-HTLLLGG 33 (227)
T ss_pred CEEEEecCC--cHHHHHHHHHHHhh-CCEEEEe
Confidence 579999999 69999999999999 8888843
No 214
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=75.07 E-value=3.6 Score=42.72 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=28.0
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
..+.|++||++ +=+|+++|.+|+++|.+|+.
T Consensus 9 ~~~~vLVtG~~--GfIG~~l~~~L~~~G~~V~~ 39 (353)
T PLN02896 9 ATGTYCVTGAT--GYIGSWLVKLLLQRGYTVHA 39 (353)
T ss_pred CCCEEEEECCC--cHHHHHHHHHHHHCCCEEEE
Confidence 44579999999 69999999999999999987
No 215
>PRK12827 short chain dehydrogenase; Provisional
Probab=75.06 E-value=3.3 Score=39.78 Aligned_cols=29 Identities=28% Similarity=0.384 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+++||++ +=+|+++|..|+++|.+|.+
T Consensus 7 ~~ilItGas--g~iG~~la~~l~~~g~~v~~ 35 (249)
T PRK12827 7 RRVLITGGS--GGLGRAIAVRLAADGADVIV 35 (249)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHCCCeEEE
Confidence 679999999 68999999999999999977
No 216
>PRK06720 hypothetical protein; Provisional
Probab=74.95 E-value=4.8 Score=38.31 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=28.1
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
-+.+++||++ +=+|+++|..|+++|.+|.+.+
T Consensus 16 gk~~lVTGa~--~GIG~aia~~l~~~G~~V~l~~ 47 (169)
T PRK06720 16 GKVAIVTGGG--IGIGRNTALLLAKQGAKVIVTD 47 (169)
T ss_pred CCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEE
Confidence 4678999999 5799999999999999999833
No 217
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=74.94 E-value=5 Score=39.76 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=27.4
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-|-|++||+++++=+|+|+|..|.++|.+|.+
T Consensus 10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l 41 (258)
T PRK07533 10 GKRGLVVGIANEQSIAWGCARAFRALGAELAV 41 (258)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEE
Confidence 36789999983126999999999999999988
No 218
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=74.88 E-value=4.4 Score=40.77 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=27.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-++.||+++.+=+|+|||..|+++|.+|++.
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~ 39 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFT 39 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEe
Confidence 57899999821159999999999999999984
No 219
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=74.67 E-value=4.6 Score=36.82 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=33.9
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcE-EEee--chhHHHHHhccC
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VATI--CKDDYEKLKLRI 507 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~-v~~~--~~~~~~~~~~~~ 507 (533)
.-+.|++.|+. ..||+++.+|+++|++ |.+. +.++-+.+.++.
T Consensus 11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 56789999998 8999999999999999 7773 335566665554
No 220
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=74.66 E-value=4.8 Score=38.79 Aligned_cols=31 Identities=29% Similarity=0.389 Sum_probs=27.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.+++||++ +=+|+++|..|+++|.+|++.+
T Consensus 6 ~~~lItG~~--g~iG~~~a~~l~~~G~~vi~~~ 36 (253)
T PRK08217 6 KVIVITGGA--QGLGRAMAEYLAQKGAKLALID 36 (253)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEEEe
Confidence 468999998 6899999999999999998833
No 221
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=74.54 E-value=3.1 Score=41.59 Aligned_cols=29 Identities=10% Similarity=0.251 Sum_probs=23.9
Q ss_pred EEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 467 LLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 467 ~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|+|...| +++|+|||.+|+++|.+|.+++
T Consensus 18 ~itN~SS-GgIG~AIA~~la~~Ga~Vvlv~ 46 (227)
T TIGR02114 18 SITNHST-GHLGKIITETFLSAGHEVTLVT 46 (227)
T ss_pred eecCCcc-cHHHHHHHHHHHHCCCEEEEEc
Confidence 4554444 7999999999999999999854
No 222
>PLN02214 cinnamoyl-CoA reductase
Probab=74.43 E-value=3.4 Score=43.11 Aligned_cols=30 Identities=20% Similarity=0.208 Sum_probs=27.5
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.|++||++ +-+|++++..|.++|.+|..
T Consensus 10 ~~~vlVTGat--GfIG~~l~~~L~~~G~~V~~ 39 (342)
T PLN02214 10 GKTVCVTGAG--GYIASWIVKILLERGYTVKG 39 (342)
T ss_pred CCEEEEECCC--cHHHHHHHHHHHHCcCEEEE
Confidence 3579999999 69999999999999999987
No 223
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=74.41 E-value=4.7 Score=40.71 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=27.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-|++||+++.+=+|+|+|..|+++|.+|++.
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~ 37 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFT 37 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence 67899999731359999999999999999983
No 224
>PRK12744 short chain dehydrogenase; Provisional
Probab=74.32 E-value=3.3 Score=40.61 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=26.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.|++||++ +=+|+++|..|+++|.+|++
T Consensus 9 k~vlItGa~--~gIG~~~a~~l~~~G~~vv~ 37 (257)
T PRK12744 9 KVVLIAGGA--KNLGGLIARDLAAQGAKAVA 37 (257)
T ss_pred cEEEEECCC--chHHHHHHHHHHHCCCcEEE
Confidence 679999999 58999999999999999666
No 225
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=74.21 E-value=3.4 Score=44.98 Aligned_cols=97 Identities=23% Similarity=0.368 Sum_probs=57.0
Q ss_pred eeEEeeccCc-eeccchhhhHhHHHHHHHHHHHHhcCCeEEEe--cccccccccccccceeeccCCCCceeEEeeCCcch
Q 009511 375 QTWVVPRYIV-QYNLPWRREAINSLIEEAILEADAKGVKVISL--GLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLA 451 (533)
Q Consensus 375 ~~w~~pr~~~-~y~~~~~~~~in~~ie~ai~~a~~~g~kv~sl--g~ln~~~~ln~~g~l~~~~~p~~l~vrvv~g~~l~ 451 (533)
..-++|.-+- -|..|.-. +-+..-.+.|+.|+.= |.|-.+|. |-| |-| +. +.+
T Consensus 118 pvvi~Pamn~~m~~~p~~~--------~Nl~~L~~~G~~ii~P~~g~la~~~~--g~g-----r~~-~~-------~~I- 173 (399)
T PRK05579 118 PVLVAPAMNTQMWENPATQ--------RNLATLRSRGVEIIGPASGRLACGDV--GPG-----RMA-EP-------EEI- 173 (399)
T ss_pred CEEEEeCCChhHcCCHHHH--------HHHHHHHHCCCEEECCCCccccCCCc--CCC-----CCC-CH-------HHH-
Confidence 5556665544 23334333 4444445579999854 44444444 333 344 11 111
Q ss_pred hhhhhhcC-Cc--CcceEEEecc---------------ccchhhHHHHHHHhhhcCcEEEeec
Q 009511 452 AAVVVNSL-PK--TTAHVLLRGT---------------VTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 452 aa~v~~~i-p~--~~~~v~l~g~---------------~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
...|.+.+ |+ .-+.|+.||. .| +|+|+|+|.+|.++|.+|.+++
T Consensus 174 ~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SS-G~~G~aiA~~l~~~Ga~V~~v~ 235 (399)
T PRK05579 174 VAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSS-GKMGYALARAAARRGADVTLVS 235 (399)
T ss_pred HHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCc-chHHHHHHHHHHHCCCEEEEeC
Confidence 22233333 23 3468999998 34 6999999999999999998743
No 226
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=74.20 E-value=3.2 Score=41.83 Aligned_cols=30 Identities=30% Similarity=0.403 Sum_probs=27.1
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.|++||++ +-+|+.+|..|.++|.+|..++
T Consensus 2 ~vlItG~~--G~iG~~l~~~L~~~g~~V~~~~ 31 (328)
T TIGR03466 2 KVLVTGAT--GFVGSAVVRLLLEQGEEVRVLV 31 (328)
T ss_pred eEEEECCc--cchhHHHHHHHHHCCCEEEEEE
Confidence 58999999 6999999999999999998833
No 227
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif. They are found associated with IS21 family insertion sequences []. Functionally they have not been characterised, but they may be involved in transposition [].; GO: 0005524 ATP binding; PDB: 3EC2_A 3ECC_A 2W58_A 2QGZ_A.
Probab=74.18 E-value=5.6 Score=38.21 Aligned_cols=43 Identities=26% Similarity=0.318 Sum_probs=32.9
Q ss_pred ceEEEeccccchh--hHHHHHHHhhhcCcEEEe-echhHHHHHhcc
Q 009511 464 AHVLLRGTVTANK--VANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~ 506 (533)
+-++|.|.+..+| ++.|||..+|++|.+|.. ...|-++.|+..
T Consensus 48 ~~l~l~G~~G~GKThLa~ai~~~~~~~g~~v~f~~~~~L~~~l~~~ 93 (178)
T PF01695_consen 48 ENLILYGPPGTGKTHLAVAIANEAIRKGYSVLFITASDLLDELKQS 93 (178)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHCC
T ss_pred eEEEEEhhHhHHHHHHHHHHHHHhccCCcceeEeecCceecccccc
Confidence 4578888776666 999999999999999998 666778888765
No 228
>PRK07201 short chain dehydrogenase; Provisional
Probab=74.17 E-value=4.1 Score=45.87 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=32.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKL 505 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~ 505 (533)
|.|++||++ +-+|+++|..|+++|.+|.+++ .++-+++.+
T Consensus 372 k~vlItGas--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 413 (657)
T PRK07201 372 KVVLITGAS--SGIGRATAIKVAEAGATVFLVARNGEALDELVA 413 (657)
T ss_pred CEEEEeCCC--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 579999999 6999999999999999999833 444444433
No 229
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=74.04 E-value=6.4 Score=37.76 Aligned_cols=41 Identities=15% Similarity=0.176 Sum_probs=33.1
Q ss_pred hhhhhhhcCCc--CcceEEEeccccchh-hHHHHHHHhhhcCcEEEe
Q 009511 451 AAAVVVNSLPK--TTAHVLLRGTVTANK-VANAVASSLCQMGIKVAT 494 (533)
Q Consensus 451 ~aa~v~~~ip~--~~~~v~l~g~~~~~k-~~~aia~~lc~~~~~v~~ 494 (533)
++.-.+.+++. +-+.|++.|+. + +|..+|.+|+++|.+|.+
T Consensus 30 a~v~l~~~~~~~l~gk~vlViG~G---~~~G~~~a~~L~~~g~~V~v 73 (168)
T cd01080 30 GILELLKRYGIDLAGKKVVVVGRS---NIVGKPLAALLLNRNATVTV 73 (168)
T ss_pred HHHHHHHHcCCCCCCCEEEEECCc---HHHHHHHHHHHhhCCCEEEE
Confidence 33335666764 55899999998 7 599999999999999888
No 230
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=74.00 E-value=5 Score=40.29 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=34.7
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccCCh
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~~~ 509 (533)
.|-+..||+. |-+|||||..|.++|.||.+ .+++.=|.--+..|.
T Consensus 14 sk~~~vtGg~--sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g 60 (256)
T KOG1200|consen 14 SKVAAVTGGS--SGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG 60 (256)
T ss_pred cceeEEecCC--chHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence 4556889999 69999999999999999999 555555555555444
No 231
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=73.73 E-value=3.6 Score=39.67 Aligned_cols=29 Identities=17% Similarity=0.255 Sum_probs=24.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcC--cEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~--~~v~~ 494 (533)
+.|++||++ +-+|++||.+|+++| ++|..
T Consensus 1 ~~vlItGas--~gIG~~ia~~l~~~~~~~~v~~ 31 (235)
T PRK09009 1 MNILIVGGS--GGIGKAMVKQLLERYPDATVHA 31 (235)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHhCCCCEEEE
Confidence 368999999 699999999999984 66654
No 232
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=73.64 E-value=4.4 Score=39.00 Aligned_cols=29 Identities=34% Similarity=0.359 Sum_probs=26.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +-+|++++..|.++|.+|.+
T Consensus 2 ~~~lItGa~--g~iG~~l~~~l~~~g~~v~~ 30 (247)
T PRK09730 2 AIALVTGGS--RGIGRATALLLAQEGYTVAV 30 (247)
T ss_pred CEEEEeCCC--chHHHHHHHHHHHCCCEEEE
Confidence 468999999 69999999999999999975
No 233
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=73.62 E-value=4.5 Score=41.99 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=28.3
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+-|-++.||+.+.+=+|||+|..|.++|.+|++.
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~ 40 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVG 40 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence 3467899999521579999999999999999993
No 234
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=73.60 E-value=4.9 Score=41.09 Aligned_cols=67 Identities=10% Similarity=0.090 Sum_probs=44.1
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhc-----------c--CChhh-c---ccceecccccc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL-----------R--IPVEA-Q---HNLVLSTSYAA 523 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~-----------~--~~~~~-~---~~l~~~~~~~~ 523 (533)
.+.|-+.|.. .+|.+||..|++.|.+|.+ .+.++-++.++ + +.++. + ..+...+.+++
T Consensus 4 ~~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (295)
T PLN02545 4 IKKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEE 80 (295)
T ss_pred cCEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHH
Confidence 4678889998 9999999999999999998 45555443222 1 11111 1 12333446677
Q ss_pred cCceeeEee
Q 009511 524 HKTVTMVTI 532 (533)
Q Consensus 524 ~~~~~~~~~ 532 (533)
.+.|.+|..
T Consensus 81 ~~~aD~Vie 89 (295)
T PLN02545 81 LRDADFIIE 89 (295)
T ss_pred hCCCCEEEE
Confidence 788888753
No 235
>PRK07904 short chain dehydrogenase; Provisional
Probab=73.49 E-value=4.6 Score=40.04 Aligned_cols=31 Identities=16% Similarity=0.263 Sum_probs=27.0
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcC-cEEEee
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVATI 495 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~-~~v~~~ 495 (533)
.+.|++||++ +-+|+++|..|.++| .+|.++
T Consensus 8 ~~~vlItGas--~giG~~la~~l~~~gg~~V~~~ 39 (253)
T PRK07904 8 PQTILLLGGT--SEIGLAICERYLKNAPARVVLA 39 (253)
T ss_pred CcEEEEEcCC--cHHHHHHHHHHHhcCCCeEEEE
Confidence 3468999999 699999999999995 899883
No 236
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=73.42 E-value=4.6 Score=38.74 Aligned_cols=31 Identities=26% Similarity=0.497 Sum_probs=27.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|-+++||++ +=+|+++|..|.++|.+|+.+.
T Consensus 1 k~~lItG~s--g~iG~~la~~l~~~G~~v~~~~ 31 (242)
T TIGR01829 1 RIALVTGGM--GGIGTAICQRLAKDGYRVAANC 31 (242)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHCCCEEEEEe
Confidence 458999999 6999999999999999998843
No 237
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=73.38 E-value=3.1 Score=45.46 Aligned_cols=83 Identities=11% Similarity=0.079 Sum_probs=49.7
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhhc-ccceecc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQ-HNLVLST 519 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~~-~~l~~~~ 519 (533)
+.+|+|+.-+.+.++. | +++.|.+||++ ++|+.|+....+++.+|.+ +.-...--+-+.+.-|.. +.++.+.
T Consensus 159 ~~vv~g~~~~~~~l~~--~-~vd~V~fTGs~---~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~ 232 (443)
T cd07132 159 YPVVLGGVEETTELLK--Q-RFDYIFYTGST---SVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGK 232 (443)
T ss_pred EEEEeCCHHHHHHHHh--C-CCCEEEEECCh---HHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHH
Confidence 4467765434444553 4 79999999999 9999999987788888877 211111111112332322 3333444
Q ss_pred cccccCceeeE
Q 009511 520 SYAAHKTVTMV 530 (533)
Q Consensus 520 ~~~~~~~~~~~ 530 (533)
-+.+||.|.-.
T Consensus 233 f~~~GQ~C~a~ 243 (443)
T cd07132 233 FINAGQTCIAP 243 (443)
T ss_pred HhcCCCceeCC
Confidence 55688988743
No 238
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=73.14 E-value=3.9 Score=39.94 Aligned_cols=28 Identities=29% Similarity=0.399 Sum_probs=26.6
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.|++||+| .++|++++..|-++|.+|..
T Consensus 2 ~ilV~Gat--G~~G~~~~~~L~~~~~~v~~ 29 (275)
T COG0702 2 KILVTGAT--GFVGGAVVRELLARGHEVRA 29 (275)
T ss_pred eEEEEecc--cchHHHHHHHHHhCCCEEEE
Confidence 58999999 69999999999999999999
No 239
>PRK08278 short chain dehydrogenase; Provisional
Probab=72.82 E-value=4.1 Score=40.72 Aligned_cols=31 Identities=13% Similarity=0.260 Sum_probs=27.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|.+++||++ +=+|++||..|+++|.+|++++
T Consensus 7 k~vlItGas--~gIG~~ia~~l~~~G~~V~~~~ 37 (273)
T PRK08278 7 KTLFITGAS--RGIGLAIALRAARDGANIVIAA 37 (273)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEEEe
Confidence 578999999 5899999999999999998843
No 240
>PRK05599 hypothetical protein; Provisional
Probab=72.74 E-value=4.3 Score=39.95 Aligned_cols=40 Identities=23% Similarity=0.415 Sum_probs=30.4
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhccC
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKLRI 507 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~~~ 507 (533)
-|++||++ +=+|+++|..|++ |.+|++. ++++-+++.+++
T Consensus 2 ~vlItGas--~GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l 43 (246)
T PRK05599 2 SILILGGT--SDIAGEIATLLCH-GEDVVLAARRPEAAQGLASDL 43 (246)
T ss_pred eEEEEeCc--cHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHH
Confidence 47999999 5899999999995 9999993 345555554443
No 241
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=72.60 E-value=6.1 Score=41.89 Aligned_cols=59 Identities=17% Similarity=0.184 Sum_probs=45.4
Q ss_pred CcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccC-Chhhcccceeccc
Q 009511 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PVEAQHNLVLSTS 520 (533)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~-~~~~~~~l~~~~~ 520 (533)
|-+.|-||.||.- |=.|+..|.+|-++|.+|.- ..++-=|.++.+. .+..+--...+||
T Consensus 26 ~~~~k~VlITGCD--SGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~ 87 (322)
T KOG1610|consen 26 SLSDKAVLITGCD--SGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK 87 (322)
T ss_pred ccCCcEEEEecCC--cHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCC
Confidence 3466789999999 68999999999999999998 6677778888886 3333333335553
No 242
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=72.51 E-value=4.8 Score=39.45 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=27.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|.|++||+++++=+|+++|..|.++|.+|++.+
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~ 38 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTY 38 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEc
Confidence 679999998323599999999999999999843
No 243
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=72.44 E-value=6 Score=39.70 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-+++||+++..=+|+|+|..|+++|.+|++.
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil~ 38 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAFT 38 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEE
Confidence 56899999831259999999999999999884
No 244
>PRK07775 short chain dehydrogenase; Provisional
Probab=72.43 E-value=5.6 Score=39.70 Aligned_cols=29 Identities=28% Similarity=0.360 Sum_probs=26.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|-|++||++ +=+|+++|..|.++|.+|..
T Consensus 11 ~~vlVtGa~--g~iG~~la~~L~~~G~~V~~ 39 (274)
T PRK07775 11 RPALVAGAS--SGIGAATAIELAAAGFPVAL 39 (274)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEE
Confidence 579999999 68999999999999999977
No 245
>PRK06198 short chain dehydrogenase; Provisional
Probab=72.39 E-value=3.9 Score=39.96 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=27.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcE-EEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIK-VATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~-v~~~~ 496 (533)
|.|++||++ +=+|+++|..|+++|.+ |.+++
T Consensus 7 k~vlItGa~--g~iG~~la~~l~~~G~~~V~~~~ 38 (260)
T PRK06198 7 KVALVTGGT--QGLGAAIARAFAERGAAGLVICG 38 (260)
T ss_pred cEEEEeCCC--chHHHHHHHHHHHCCCCeEEEEc
Confidence 568999999 57999999999999999 77733
No 246
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=72.37 E-value=4.6 Score=44.01 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=34.6
Q ss_pred hhhhhhhcC---------CcCcceEEEeccccchhhHHH--HHHHhhhcCcEEEeec
Q 009511 451 AAAVVVNSL---------PKTTAHVLLRGTVTANKVANA--VASSLCQMGIKVATIC 496 (533)
Q Consensus 451 ~aa~v~~~i---------p~~~~~v~l~g~~~~~k~~~a--ia~~lc~~~~~v~~~~ 496 (533)
.++.|.|+| .++-|.|+.||++ +.+|.| ||.+| +.|..|+.++
T Consensus 20 c~~~v~~qi~~~~~~~~~~~ggK~aLVTGaS--sGIGlA~~IA~al-~~GA~Vi~v~ 73 (398)
T PRK13656 20 CEANVKEQIEYVKAQGPIANGPKKVLVIGAS--SGYGLASRIAAAF-GAGADTLGVF 73 (398)
T ss_pred HHHHHHHHHHHHHhcCCcCCCCCEEEEECCC--chHhHHHHHHHHH-HcCCeEEEEe
Confidence 345666666 3567899999999 699999 99999 9999987743
No 247
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=72.35 E-value=6.5 Score=40.18 Aligned_cols=37 Identities=11% Similarity=0.228 Sum_probs=30.7
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHH
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~ 502 (533)
.+.|-+.|+. .+|++||..|+++|.+|.+ .+.+.-++
T Consensus 3 i~~I~ViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~ 41 (291)
T PRK06035 3 IKVIGVVGSG---VMGQGIAQVFARTGYDVTIVDVSEEILKN 41 (291)
T ss_pred CcEEEEECcc---HHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 4678899998 8999999999999999998 45555443
No 248
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=72.21 E-value=5.4 Score=40.95 Aligned_cols=30 Identities=27% Similarity=0.355 Sum_probs=27.5
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-|-++.||++ +=+|+|||..|++.|-+|++
T Consensus 8 gkvalVTG~s--~GIG~aia~~la~~Ga~v~i 37 (270)
T KOG0725|consen 8 GKVALVTGGS--SGIGKAIALLLAKAGAKVVI 37 (270)
T ss_pred CcEEEEECCC--ChHHHHHHHHHHHCCCEEEE
Confidence 4568999999 58999999999999999999
No 249
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=72.07 E-value=3.1 Score=45.71 Aligned_cols=85 Identities=13% Similarity=0.140 Sum_probs=50.5
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhh-cccce
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLV 516 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~ 516 (533)
.=-+.+|+|+.=..+..++. | ++-|.+||++ ++|+.|+....++..+|.+ +.-...--+-+.+..+. .+.++
T Consensus 156 ~gv~~~v~g~~~~~~~L~~~-~--v~~V~fTGS~---~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~ 229 (449)
T cd07136 156 EEYVAVVEGGVEENQELLDQ-K--FDYIFFTGSV---RVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIV 229 (449)
T ss_pred CCEEEEEeCChHHHHHHhcC-C--CCEEEEECCH---HHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHH
Confidence 33456777754334444442 3 9999999999 8999999988888888877 11111111111222222 33444
Q ss_pred ecccccccCceee
Q 009511 517 LSTSYAAHKTVTM 529 (533)
Q Consensus 517 ~~~~~~~~~~~~~ 529 (533)
...-+.+||.|.-
T Consensus 230 ~~~~~~~GQ~C~a 242 (449)
T cd07136 230 WGKFLNAGQTCVA 242 (449)
T ss_pred HHHHcccCCcccC
Confidence 5555568898864
No 250
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=72.05 E-value=3.3 Score=46.45 Aligned_cols=81 Identities=20% Similarity=0.154 Sum_probs=46.8
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHh--hhcCcEEEe-echhHHHHHhccCC------hhhc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL--CQMGIKVAT-ICKDDYEKLKLRIP------VEAQ 512 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~l--c~~~~~v~~-~~~~~~~~~~~~~~------~~~~ 512 (533)
+-+|.|+. ..+.+.+ ++++-|.+||++ .+|+.|+.+- .+++.+|.+ +.-..---+-+.+. +..-
T Consensus 209 ~~~v~g~~---~~~~~~l-~~v~~v~fTGS~---~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa 281 (521)
T PRK11903 209 LSVVCGSS---AGLLDHL-QPFDVVSFTGSA---ETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFV 281 (521)
T ss_pred eEEeeCCc---hHHHhcc-cCCCEEEEECCH---HHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHH
Confidence 44555533 1134444 578889999998 9999999853 367788777 21111111111122 2233
Q ss_pred ccceecccccccCceee
Q 009511 513 HNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 513 ~~l~~~~~~~~~~~~~~ 529 (533)
+.++.+.-+.+||.|.-
T Consensus 282 ~~i~~~~f~~sGQ~C~a 298 (521)
T PRK11903 282 KEVVREMTVKSGQKCTA 298 (521)
T ss_pred HHHHHHHHhccCCCccC
Confidence 44445555679999974
No 251
>PRK06123 short chain dehydrogenase; Provisional
Probab=71.96 E-value=6 Score=38.26 Aligned_cols=29 Identities=17% Similarity=0.247 Sum_probs=26.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+++||++ +=+|.++|..|+++|.+|++
T Consensus 3 ~~~lVtG~~--~~iG~~~a~~l~~~G~~vv~ 31 (248)
T PRK06123 3 KVMIITGAS--RGIGAATALLAAERGYAVCL 31 (248)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCeEEE
Confidence 458999999 68999999999999999877
No 252
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=71.89 E-value=4.2 Score=41.46 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=26.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.|++||++ +=+|+++|..|.++|.+|..
T Consensus 6 k~vlVtG~~--G~IG~~l~~~L~~~G~~V~~ 34 (325)
T PLN02989 6 KVVCVTGAS--GYIASWIVKLLLFRGYTINA 34 (325)
T ss_pred CEEEEECCc--hHHHHHHHHHHHHCCCEEEE
Confidence 679999999 68999999999999999976
No 253
>PLN02467 betaine aldehyde dehydrogenase
Probab=71.85 E-value=3.8 Score=45.68 Aligned_cols=85 Identities=11% Similarity=0.106 Sum_probs=52.0
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceec
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLS 518 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~ 518 (533)
-+.+|.|+.-.++.-|- -.++++-|.+||++ .+|++|+....++..+|.+ +.-...--+-+.+.-| ..+.++..
T Consensus 210 vv~~v~g~~~~~~~~L~-~~~~v~~v~fTGs~---~~g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~ 285 (503)
T PLN02467 210 VLNVVTGLGTEAGAPLA-SHPGVDKIAFTGST---ATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFG 285 (503)
T ss_pred eEEEEeCCchhHHHHHh-cCCCCCEEEEECCH---HHHHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHH
Confidence 37778775433322221 13478899999999 9999999998888888887 2111111111123333 23344455
Q ss_pred ccccccCceee
Q 009511 519 TSYAAHKTVTM 529 (533)
Q Consensus 519 ~~~~~~~~~~~ 529 (533)
...++||.|.-
T Consensus 286 ~f~~~GQ~C~a 296 (503)
T PLN02467 286 CFWTNGQICSA 296 (503)
T ss_pred HHhhcCCCCCC
Confidence 56679999964
No 254
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=71.77 E-value=4.4 Score=40.00 Aligned_cols=33 Identities=12% Similarity=0.267 Sum_probs=27.7
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
-|.|++||++.++=+|+++|..|+++|.+|++.
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~ 38 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFT 38 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEE
Confidence 367899999832359999999999999999884
No 255
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=71.75 E-value=6.8 Score=40.03 Aligned_cols=67 Identities=28% Similarity=0.323 Sum_probs=44.8
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccC-------------Chh-----hcccceeccccc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-------------PVE-----AQHNLVLSTSYA 522 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~-------------~~~-----~~~~l~~~~~~~ 522 (533)
.+.|-+.|+. -+|++||..|.++|.+|.+ .+.+.-+++++.+ .++ ...++...+.++
T Consensus 3 ~~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~ 79 (287)
T PRK08293 3 IKNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLA 79 (287)
T ss_pred ccEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHH
Confidence 4578888988 7999999999999999999 5555555554331 111 112333445776
Q ss_pred -ccCceeeEee
Q 009511 523 -AHKTVTMVTI 532 (533)
Q Consensus 523 -~~~~~~~~~~ 532 (533)
+.++|.+|.+
T Consensus 80 ~a~~~aDlVie 90 (287)
T PRK08293 80 EAVKDADLVIE 90 (287)
T ss_pred HHhcCCCEEEE
Confidence 4588887753
No 256
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=71.53 E-value=5.6 Score=40.63 Aligned_cols=40 Identities=13% Similarity=0.242 Sum_probs=33.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
+.|-+.|+. .+|+++|..|+++|.+|.+ .+++.-++++++
T Consensus 2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~ 43 (288)
T PRK09260 2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQE 43 (288)
T ss_pred cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence 567888998 8999999999999999999 666777766543
No 257
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=71.20 E-value=3.7 Score=45.72 Aligned_cols=85 Identities=15% Similarity=0.111 Sum_probs=48.1
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhh-hcCcEEEe-echhHHHHHhccCChhh-ccccee
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVL 517 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc-~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~~ 517 (533)
-+.+|+|+.-.+...|-+- ++++-|.+||++ .+|++|+.+.+ ++..+|.+ +.-..---+-+.+..|. -+.++.
T Consensus 217 vv~~v~g~~~~~~~~L~~~-p~v~~V~FTGS~---~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~ 292 (501)
T PLN02766 217 VINVVTGFGPTAGAAIASH-MDVDKVSFTGST---EVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALL 292 (501)
T ss_pred cEEEEecCchHHHHHHhcC-CCCCEEEEECcH---HHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHH
Confidence 3667777544333333222 358899999999 99999999888 47778877 11111100111122222 222333
Q ss_pred cccccccCceee
Q 009511 518 STSYAAHKTVTM 529 (533)
Q Consensus 518 ~~~~~~~~~~~~ 529 (533)
..-+.+||.|.-
T Consensus 293 g~f~n~GQ~C~a 304 (501)
T PLN02766 293 GIFYNKGEICVA 304 (501)
T ss_pred HHHhhcCCCCCC
Confidence 434578999964
No 258
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=71.02 E-value=3.5 Score=40.78 Aligned_cols=29 Identities=21% Similarity=0.395 Sum_probs=26.1
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|++||++ +-+|++++..|.++|.+|..++
T Consensus 1 vlVtGat--G~iG~~l~~~L~~~g~~V~~~~ 29 (292)
T TIGR01777 1 ILITGGT--GFIGRALTQRLTKDGHEVTILT 29 (292)
T ss_pred CEEEccc--chhhHHHHHHHHHcCCEEEEEe
Confidence 6899999 6999999999999999998733
No 259
>PRK07791 short chain dehydrogenase; Provisional
Probab=70.99 E-value=6 Score=40.05 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=27.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-+++||++ +=+|++||..|+++|.+|++.
T Consensus 7 k~~lITGas--~GIG~aia~~la~~G~~vii~ 36 (286)
T PRK07791 7 RVVIVTGAG--GGIGRAHALAFAAEGARVVVN 36 (286)
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEEe
Confidence 678999999 689999999999999999883
No 260
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=70.91 E-value=6.3 Score=40.60 Aligned_cols=67 Identities=15% Similarity=0.167 Sum_probs=45.4
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHH-----------Hhcc--CChh----hcccceeccccc
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK-----------LKLR--IPVE----AQHNLVLSTSYA 522 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~-----------~~~~--~~~~----~~~~l~~~~~~~ 522 (533)
+.+.|-..|+. .+|+.||..|.+.|++|.+ .+.+.-++ +.++ ..++ ...++-.++.|+
T Consensus 4 ~~~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~ 80 (286)
T PRK07819 4 AIQRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLG 80 (286)
T ss_pred CccEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHH
Confidence 34578888998 8999999999999999999 45554443 2222 2111 222333455888
Q ss_pred ccCceeeEe
Q 009511 523 AHKTVTMVT 531 (533)
Q Consensus 523 ~~~~~~~~~ 531 (533)
+.+.|.+|.
T Consensus 81 ~~~~~d~Vi 89 (286)
T PRK07819 81 DFADRQLVI 89 (286)
T ss_pred HhCCCCEEE
Confidence 888888873
No 261
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=70.79 E-value=4.4 Score=44.62 Aligned_cols=87 Identities=10% Similarity=0.043 Sum_probs=48.9
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhh-cCcEEEe-echhHHHHHhccCChhhc-ccc
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT-ICKDDYEKLKLRIPVEAQ-HNL 515 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~-~~~~v~~-~~~~~~~~~~~~~~~~~~-~~l 515 (533)
+=-+.+|.|+.-.+...|.+-| +++-|++||++ .+|+.|+.+..+ +..+|.+ +.-..---+-+.+.-|.. +.+
T Consensus 198 ~gvv~~v~g~~~~~~~~L~~~~-~v~~v~fTGs~---~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i 273 (476)
T cd07142 198 DGVLNIVTGFGPTAGAAIASHM-DVDKVAFTGST---EVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELA 273 (476)
T ss_pred cccEEEEeCCchhHHHHHhcCC-CCCEEEEECcH---HHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHH
Confidence 3345566665443333333333 48889999999 899999999886 7788877 111111111112222222 223
Q ss_pred eecccccccCceee
Q 009511 516 VLSTSYAAHKTVTM 529 (533)
Q Consensus 516 ~~~~~~~~~~~~~~ 529 (533)
+.+.-+.+||.|.-
T Consensus 274 ~~~~f~~aGQ~C~a 287 (476)
T cd07142 274 HFALFFNQGQCCCA 287 (476)
T ss_pred HHHHhcCCCCCCCC
Confidence 33444568898864
No 262
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=70.39 E-value=4.8 Score=41.13 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=26.7
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
.|++||++ +-||+++|.+|.++|.+|++.
T Consensus 2 ~vlVtGat--G~iG~~l~~~L~~~g~~V~~~ 30 (338)
T PRK10675 2 RVLVTGGS--GYIGSHTCVQLLQNGHDVVIL 30 (338)
T ss_pred eEEEECCC--ChHHHHHHHHHHHCCCeEEEE
Confidence 48999999 699999999999999999884
No 263
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=70.22 E-value=5.2 Score=43.73 Aligned_cols=30 Identities=20% Similarity=0.267 Sum_probs=27.5
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.|++||++ +-||+.++.+|.++|.+|..++
T Consensus 122 kILVTGat--GFIGs~Lv~~Ll~~G~~V~~ld 151 (436)
T PLN02166 122 RIVVTGGA--GFVGSHLVDKLIGRGDEVIVID 151 (436)
T ss_pred EEEEECCc--cHHHHHHHHHHHHCCCEEEEEe
Confidence 69999999 6999999999999999999843
No 264
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=70.03 E-value=6.4 Score=39.98 Aligned_cols=57 Identities=25% Similarity=0.190 Sum_probs=37.4
Q ss_pred eCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhc
Q 009511 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKL 505 (533)
Q Consensus 446 ~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~ 505 (533)
||....++.--+..+..-+.|+++|+. -+|+|+|.+|++.|.+|.+.+ .++=+++.+
T Consensus 100 D~~G~~~~l~~~~~~~~~k~vliiGaG---g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~ 158 (270)
T TIGR00507 100 DGIGLVSDLERLIPLRPNQRVLIIGAG---GAARAVALPLLKADCNVIIANRTVSKAEELAE 158 (270)
T ss_pred CHHHHHHHHHhcCCCccCCEEEEEcCc---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 555555552111122345789999986 799999999999999998833 234444443
No 265
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=69.83 E-value=4.9 Score=38.29 Aligned_cols=27 Identities=22% Similarity=0.416 Sum_probs=25.1
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|+.||++ +=||++++.+|.++|.+|+.
T Consensus 1 IlI~Gat--G~iG~~l~~~l~~~g~~v~~ 27 (236)
T PF01370_consen 1 ILITGAT--GFIGSALVRQLLKKGHEVIV 27 (236)
T ss_dssp EEEETTT--SHHHHHHHHHHHHTTTEEEE
T ss_pred EEEEccC--CHHHHHHHHHHHHcCCcccc
Confidence 7899999 69999999999999999775
No 266
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=69.79 E-value=6.1 Score=38.88 Aligned_cols=29 Identities=17% Similarity=0.253 Sum_probs=25.6
Q ss_pred eEEEeccccchhhHHHHHHHhhh----cCcEEEee
Q 009511 465 HVLLRGTVTANKVANAVASSLCQ----MGIKVATI 495 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~----~~~~v~~~ 495 (533)
-|++||++ +=+|+++|..|++ .|.+|.++
T Consensus 2 ~vlItGas--~GIG~~~a~~la~~~~~~g~~V~~~ 34 (256)
T TIGR01500 2 VCLVTGAS--RGFGRTIAQELAKCLKSPGSVLVLS 34 (256)
T ss_pred EEEEecCC--CchHHHHHHHHHHhhccCCcEEEEE
Confidence 37899999 6899999999997 79999883
No 267
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=69.08 E-value=6.2 Score=45.59 Aligned_cols=106 Identities=12% Similarity=0.149 Sum_probs=62.2
Q ss_pred cCcccceeEEeeccCc-eeccchhhhHhHHHHHH----HHHHHHhcCCeEEEecccccccccccccceeeccCCCCceeE
Q 009511 369 LDKLKLQTWVVPRYIV-QYNLPWRREAINSLIEE----AILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIK 443 (533)
Q Consensus 369 ~~~~~~~~w~~pr~~~-~y~~~~~~~~in~~ie~----ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p~~l~vr 443 (533)
++.-+-..-.||--|. -+.-..+...|+..|-+ +|++|+..| ++-.|.+.|...- -|.+...-+|+ |
T Consensus 334 ~~~~~p~~~~~~~~g~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~f~~---eyw~~e~~kl~-~ 405 (676)
T TIGR02632 334 MRDPNPRVLLIPGVGMISFGKDKETARVAREFYVNAINVMRGAEAVS----EYVSLPEQEAFDI---EYWPLEEAKLR-R 405 (676)
T ss_pred ccCCCCeEEEEcCcceEEecCCHHHhhhhHHHHHHHHHHHhhhhccc----ceecCchhhccch---hhhhhhHHhhc-c
Confidence 3444447788898887 55555555667765543 355565444 3334555554443 23311100110 0
Q ss_pred EeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 444 VVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 444 vv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
.. ...+-.-|-|++||++ +-+|+++|..|+++|.+|+++
T Consensus 406 ~~-----------~~~~l~gkvvLVTGas--ggIG~aiA~~La~~Ga~Vvi~ 444 (676)
T TIGR02632 406 MP-----------KEKTLARRVAFVTGGA--GGIGRETARRLAAEGAHVVLA 444 (676)
T ss_pred CC-----------CCcCCCCCEEEEeCCC--cHHHHHHHHHHHhCCCEEEEE
Confidence 00 0111134679999999 699999999999999999983
No 268
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=69.06 E-value=5.9 Score=38.61 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=27.3
Q ss_pred hhhHHHHHHHhhhcCcEEEe--echhH----HHHHhccCChh
Q 009511 475 NKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIPVE 510 (533)
Q Consensus 475 ~k~~~aia~~lc~~~~~v~~--~~~~~----~~~~~~~~~~~ 510 (533)
+=+|+|||..|+++|.+|++ .++++ .+.+.++.+.+
T Consensus 6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~ 47 (241)
T PF13561_consen 6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE 47 (241)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE
T ss_pred CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc
Confidence 46999999999999999999 33343 56666665543
No 269
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=68.82 E-value=4 Score=44.42 Aligned_cols=82 Identities=15% Similarity=0.199 Sum_probs=50.5
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCC-hhhcccceecc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP-VEAQHNLVLST 519 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~-~~~~~~l~~~~ 519 (533)
+.+|+|+.-+++.+++. | ++.|.+||.+ ++|+.|+....++..+|.+ +.-..---+-+.+. +...+.++...
T Consensus 159 v~~v~g~~~~~~~l~~~-~--v~~v~ftGs~---~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~ 232 (433)
T cd07134 159 VAVFEGDAEVAQALLEL-P--FDHIFFTGSP---AVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGK 232 (433)
T ss_pred EEEEeCChhHHHHHHhC-C--CCEEEEECCh---HHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHh
Confidence 66888866555556653 3 7899999998 8999999987777778777 11100000001121 22233444555
Q ss_pred cccccCceee
Q 009511 520 SYAAHKTVTM 529 (533)
Q Consensus 520 ~~~~~~~~~~ 529 (533)
-+.+||.|.-
T Consensus 233 ~~~~GQ~C~a 242 (433)
T cd07134 233 FLNAGQTCIA 242 (433)
T ss_pred hcCcCCcccC
Confidence 5678899874
No 270
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=68.60 E-value=5.2 Score=41.50 Aligned_cols=31 Identities=19% Similarity=0.214 Sum_probs=27.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +=+|+++|..|+++|.+|+.++
T Consensus 5 k~ilItGat--G~IG~~l~~~L~~~G~~V~~~~ 35 (349)
T TIGR02622 5 KKVLVTGHT--GFKGSWLSLWLLELGAEVYGYS 35 (349)
T ss_pred CEEEEECCC--ChhHHHHHHHHHHCCCEEEEEe
Confidence 679999999 5799999999999999998743
No 271
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=68.46 E-value=4.9 Score=43.82 Aligned_cols=85 Identities=12% Similarity=0.064 Sum_probs=48.7
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceec
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLS 518 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~ 518 (533)
-+.+|+|+.-.+.-.|-+- ++++-|++||.+ ++|+.|+....++..+|.+ +.-...--+-+.+.-| ..+.++.+
T Consensus 179 vv~~v~g~~~~~~~~L~~~-~~v~~V~fTGs~---~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~ 254 (456)
T cd07110 179 VLNVVTGTGDEAGAPLAAH-PGIDKISFTGST---ATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFG 254 (456)
T ss_pred cEEEEecCchHHHHHHhcC-CCCCEEEEECCH---HHHHHHHHHHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHH
Confidence 3677777543222222222 478889999998 8999999988888888877 1100000000112111 12233445
Q ss_pred ccccccCceee
Q 009511 519 TSYAAHKTVTM 529 (533)
Q Consensus 519 ~~~~~~~~~~~ 529 (533)
..+.+||.|.-
T Consensus 255 ~~~~~GQ~C~a 265 (456)
T cd07110 255 CFWNNGQICSA 265 (456)
T ss_pred HHhcCCCCCCC
Confidence 55678999864
No 272
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=68.21 E-value=5.8 Score=41.35 Aligned_cols=30 Identities=13% Similarity=0.220 Sum_probs=27.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +=+|+.++.+|.++|.+|..+
T Consensus 16 ~~vlVtGat--GfiG~~lv~~L~~~g~~V~~~ 45 (348)
T PRK15181 16 KRWLITGVA--GFIGSGLLEELLFLNQTVIGL 45 (348)
T ss_pred CEEEEECCc--cHHHHHHHHHHHHCCCEEEEE
Confidence 679999999 689999999999999999773
No 273
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=67.73 E-value=5.1 Score=39.96 Aligned_cols=30 Identities=10% Similarity=0.174 Sum_probs=26.0
Q ss_pred eEEEeccccchhhHHHHHHHhhhcC--cEEEeec
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMG--IKVATIC 496 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~--~~v~~~~ 496 (533)
.|++||++ +.+|++++..|.++| ++|+..+
T Consensus 1 ~ilItGat--G~iG~~l~~~l~~~~~~~~v~~~~ 32 (317)
T TIGR01181 1 RILVTGGA--GFIGSNFVRYILNEHPDAEVIVLD 32 (317)
T ss_pred CEEEEcCC--chHHHHHHHHHHHhCCCCEEEEec
Confidence 38999999 699999999999987 7888743
No 274
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=67.71 E-value=26 Score=37.86 Aligned_cols=100 Identities=14% Similarity=0.136 Sum_probs=54.8
Q ss_pred hhhHhHHHHHHHHHHHHhcCCeEEEecccccccccccccceeecc----CCCCceeEEeeCCcchhhhhhhcCCcCcceE
Q 009511 391 RREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLER----QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHV 466 (533)
Q Consensus 391 ~~~~in~~ie~ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~~----~p~~l~vrvv~g~~l~aa~v~~~ip~~~~~v 466 (533)
.+.++..+++..-.|- +.|++|-.+-.-.-..+-....-.|.-. +-++-.++ ++|...+... =-+-|..-+.|
T Consensus 137 akaal~gl~rsla~E~-~~gi~v~~i~~~~~~~~~~~~~~~~l~s~~~a~~~g~~i~-~~~~~~~~~~-~~~~~~~g~~v 213 (450)
T PRK08261 137 AQRALEGFTRSLGKEL-RRGATAQLVYVAPGAEAGLESTLRFFLSPRSAYVSGQVVR-VGAADAAPPA-DWDRPLAGKVA 213 (450)
T ss_pred HHHHHHHHHHHHHHHh-hcCCEEEEEecCCCCHHHHHHHHHHhcCCccCCccCcEEE-ecCCcccCCC-CcccCCCCCEE
Confidence 5667777777766676 6788874442211111111111222221 11122233 3332211110 00112234679
Q ss_pred EEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 467 LLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 467 ~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
++||++ +=+|+++|..|+++|.+|+++
T Consensus 214 lItGas--ggIG~~la~~l~~~Ga~vi~~ 240 (450)
T PRK08261 214 LVTGAA--RGIGAAIAEVLARDGAHVVCL 240 (450)
T ss_pred EEecCC--CHHHHHHHHHHHHCCCEEEEE
Confidence 999999 689999999999999999984
No 275
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=67.69 E-value=4.9 Score=44.40 Aligned_cols=52 Identities=21% Similarity=0.183 Sum_probs=37.3
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+=-+.+|+|+.-.+...|-+ .++++-|.+||++ ++|+.|+.+..+++.+|.+
T Consensus 192 ~gvv~~v~g~~~~~~~~L~~-~~~v~~V~fTGs~---~~g~~i~~~aa~~~~p~~l 243 (480)
T cd07559 192 KGVVNVVTGFGSEAGKPLAS-HPRIAKLAFTGST---TVGRLIMQYAAENLIPVTL 243 (480)
T ss_pred cCeEEEEecCchHHHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHhccCCcEEe
Confidence 44467888754322222222 3378899999999 9999999998888888876
No 276
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=67.65 E-value=3.9 Score=47.25 Aligned_cols=46 Identities=15% Similarity=0.265 Sum_probs=32.1
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHh-h-hcCcEEEe
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL-C-QMGIKVAT 494 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~l-c-~~~~~v~~ 494 (533)
+-+|.|+ +..++..+| +.+.|.+||++ ++|+.|+.+. | ++..+|.+
T Consensus 209 ~~vv~g~---~~~~~~~~~-~i~~v~FTGS~---~~G~~i~~~~~a~~~~~~~~l 256 (675)
T PRK11563 209 LQLICGS---AGDLLDHLD-GQDVVTFTGSA---ATAQKLRAHPNVVANSVPFTA 256 (675)
T ss_pred EEEeeCC---HHHHhhcCC-CCCEEEEECcH---HHHHHHHhhhhhhhCCceEEE
Confidence 5566665 112344443 57899999999 9999999863 3 77788766
No 277
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=67.52 E-value=10 Score=32.73 Aligned_cols=38 Identities=24% Similarity=0.332 Sum_probs=30.6
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
|.+.|.. .+|+.||..|-+++.+|++ .++++.++++.+
T Consensus 1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~ 40 (116)
T PF02254_consen 1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREE 40 (116)
T ss_dssp EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT
T ss_pred eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc
Confidence 5678887 8999999999999988888 666777777655
No 278
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=67.20 E-value=5.6 Score=39.75 Aligned_cols=29 Identities=17% Similarity=0.366 Sum_probs=26.3
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
.|++||++ +.+|++++..|.++|.+|...
T Consensus 1 kvlV~Gat--G~iG~~l~~~l~~~g~~V~~~ 29 (328)
T TIGR01179 1 KILVTGGA--GYIGSHTVRQLLESGHEVVVL 29 (328)
T ss_pred CEEEeCCC--CHHHHHHHHHHHhCCCeEEEE
Confidence 37999999 699999999999999999873
No 279
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=67.05 E-value=6 Score=39.33 Aligned_cols=29 Identities=17% Similarity=0.385 Sum_probs=26.2
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
.|++||++ +-+|++++..|+++|.+|..+
T Consensus 1 kilv~G~t--G~iG~~l~~~l~~~g~~v~~~ 29 (287)
T TIGR01214 1 RILITGAN--GQLGRELVQQLSPEGRVVVAL 29 (287)
T ss_pred CEEEEcCC--CHHHHHHHHHHHhcCCEEEEe
Confidence 37999999 699999999999999999873
No 280
>PLN02240 UDP-glucose 4-epimerase
Probab=66.95 E-value=6.3 Score=40.51 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=28.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
+.|++||++ +-||++++..|.++|.+|+.++
T Consensus 6 ~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~ 36 (352)
T PLN02240 6 RTILVTGGA--GYIGSHTVLQLLLAGYKVVVID 36 (352)
T ss_pred CEEEEECCC--ChHHHHHHHHHHHCCCEEEEEe
Confidence 579999999 6999999999999999998853
No 281
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=66.91 E-value=8.2 Score=39.90 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=26.3
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcC--cEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMG--IKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~--~~v~~~ 495 (533)
+.|++||++ +-+|+++|..|+++| .+|.++
T Consensus 5 k~vLVTGat--G~IG~~l~~~L~~~g~~~~V~~~ 36 (324)
T TIGR03589 5 KSILITGGT--GSFGKAFISRLLENYNPKKIIIY 36 (324)
T ss_pred CEEEEeCCC--CHHHHHHHHHHHHhCCCcEEEEE
Confidence 579999999 699999999999986 688773
No 282
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=66.87 E-value=5.8 Score=40.25 Aligned_cols=27 Identities=26% Similarity=0.292 Sum_probs=24.3
Q ss_pred EEEeccccchhhHHHHHHHhhhcC--cEEEe
Q 009511 466 VLLRGTVTANKVANAVASSLCQMG--IKVAT 494 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~--~~v~~ 494 (533)
|++||+| +-+|++++..|.++| .+|..
T Consensus 2 vlvtGat--G~lG~~l~~~L~~~g~~~~V~~ 30 (367)
T TIGR01746 2 VLLTGAT--GFLGAYLLEELLRRSTQAKVIC 30 (367)
T ss_pred EEEeccc--hHHHHHHHHHHHhCCCCCEEEE
Confidence 7999999 699999999999998 66766
No 283
>KOG1600 consensus Fatty acid desaturase [Lipid transport and metabolism]
Probab=66.82 E-value=5.3 Score=42.25 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=16.6
Q ss_pred chhhhcchhhHHHHHHHHHHHH
Q 009511 89 VDRERNWDDQIVFNGLIFYIVR 110 (533)
Q Consensus 89 vdrE~~~~n~iil~~ll~~l~~ 110 (533)
..||+.|.|.+++.++.....+
T Consensus 34 ~~~~~~w~nv~~~~~l~~~a~y 55 (321)
T KOG1600|consen 34 WKRELVWRNVVLFSALHIVALY 55 (321)
T ss_pred hhcchhhhhhHHHHHHHHHHHH
Confidence 5799999998887777655443
No 284
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=66.68 E-value=5.4 Score=43.87 Aligned_cols=85 Identities=14% Similarity=0.136 Sum_probs=47.8
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceec
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLS 518 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~ 518 (533)
-+.+|.|+.-.++-.|-+-| +++-|++||.+ ++|+.|+....++..+|.+ +.-..--=+-+.+.-| .-+.++.+
T Consensus 193 v~~~v~g~~~~~~~~l~~~~-~v~~V~fTGs~---~~g~~i~~~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~ 268 (482)
T cd07119 193 VVNLVTGSGATVGAELAESP-DVDLVSFTGGT---ATGRSIMRAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNG 268 (482)
T ss_pred cEEEEecCcHHHHHHHhcCC-CCCEEEEECcH---HHHHHHHHHHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHH
Confidence 36677775432222222222 78889999998 8999999988888778877 1111110011112222 12333344
Q ss_pred ccccccCceee
Q 009511 519 TSYAAHKTVTM 529 (533)
Q Consensus 519 ~~~~~~~~~~~ 529 (533)
.-..+||.|.-
T Consensus 269 ~~~~~GQ~C~a 279 (482)
T cd07119 269 VFFNAGQVCSA 279 (482)
T ss_pred HHhcCCCCCCC
Confidence 44568888864
No 285
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=66.43 E-value=5.7 Score=41.00 Aligned_cols=29 Identities=10% Similarity=0.201 Sum_probs=25.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.|++||++ +=+|+++|..|+++|.+|+.
T Consensus 2 ~~vlVtGat--GfIG~~l~~~L~~~g~~~v~ 30 (355)
T PRK10217 2 RKILITGGA--GFIGSALVRYIINETSDAVV 30 (355)
T ss_pred cEEEEEcCC--cHHHHHHHHHHHHcCCCEEE
Confidence 579999999 68999999999999987554
No 286
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=65.82 E-value=5.4 Score=43.83 Aligned_cols=84 Identities=15% Similarity=0.138 Sum_probs=48.5
Q ss_pred eEEeeCCcc-hhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCC-hhhcccceec
Q 009511 442 IKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP-VEAQHNLVLS 518 (533)
Q Consensus 442 vrvv~g~~l-~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~-~~~~~~l~~~ 518 (533)
+.+|.|+.- +...++.. ++++-|.+||++ .+|++|+....++..+|.+ +.-..---+-+.+. +...+.++.+
T Consensus 195 v~vv~g~~~~~~~~l~~~--~~v~~v~fTGs~---~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~ 269 (473)
T cd07097 195 FNLVMGSGSEVGQALVEH--PDVDAVSFTGST---AVGRRIAAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQG 269 (473)
T ss_pred eEEeccCchHHHHHHhcC--CCCCEEEEECcH---HHHHHHHHHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHH
Confidence 667776532 22222221 478889999999 8999999998888888877 11110000111121 1223334455
Q ss_pred ccccccCceeeE
Q 009511 519 TSYAAHKTVTMV 530 (533)
Q Consensus 519 ~~~~~~~~~~~~ 530 (533)
.-+.+||.|.-.
T Consensus 270 ~~~~~GQ~C~a~ 281 (473)
T cd07097 270 AFFSTGQRCTAS 281 (473)
T ss_pred HHhccCCCCcCC
Confidence 556789998643
No 287
>cd00431 cysteine_hydrolases Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.
Probab=65.70 E-value=56 Score=29.81 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=57.2
Q ss_pred hhHhHHHHHHHHHHHHhcCCeEEEecccccccc-------------cccccceeeccC-CCCceeEEeeCCcch------
Q 009511 392 REAINSLIEEAILEADAKGVKVISLGLLNQGEE-------------LNRNGEIYLERQ-PNKLKIKVVDGSSLA------ 451 (533)
Q Consensus 392 ~~~in~~ie~ai~~a~~~g~kv~slg~ln~~~~-------------ln~~g~l~~~~~-p~~l~vrvv~g~~l~------ 451 (533)
.+.+=+.|.+.+..|.+.|..|+=.=-..+.+. .+..|.-++..- | .-.-.+++-++--
T Consensus 22 ~~~~~~~i~~l~~~ar~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~l~~-~~~~~~i~K~~~saf~~t~ 100 (161)
T cd00431 22 ADELVPNINRLLAAARAAGIPVIFTRDWHPPDDPEFAELLWPPHCVKGTEGAELVPELAP-LPDDLVIEKTRYSAFYGTD 100 (161)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEEeeecCCCcccccccCcccccCCCchhhcchhhCC-CCCCEEEecCCcCCccCCC
Confidence 344444555666678889999885544444322 112233333321 2 1111233222211
Q ss_pred hhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 452 AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 452 aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.+|.+. +.++|+|+|-.+ +=--.+.|+.+.++|++|.+
T Consensus 101 l~~~L~~~--~i~~vil~G~~t-~~CV~~T~~~a~~~G~~v~v 140 (161)
T cd00431 101 LDELLRER--GIDTLVVCGIAT-DICVLATARDALDLGYRVIV 140 (161)
T ss_pred HHHHHHHC--CCCEEEEEecCc-ChhHHHHHHHHHHCCCEEEE
Confidence 12233333 889999999987 56668889999999999999
No 288
>PLN02572 UDP-sulfoquinovose synthase
Probab=65.48 E-value=6.5 Score=42.95 Aligned_cols=30 Identities=27% Similarity=0.284 Sum_probs=27.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +=||++++.+|.++|.+|..+
T Consensus 48 k~VLVTGat--GfIGs~Lv~~L~~~G~~V~~~ 77 (442)
T PLN02572 48 KKVMVIGGD--GYCGWATALHLSKRGYEVAIV 77 (442)
T ss_pred CEEEEECCC--cHHHHHHHHHHHHCCCeEEEE
Confidence 579999999 699999999999999999983
No 289
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=65.36 E-value=6.5 Score=41.08 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=31.1
Q ss_pred ceEEEeccccchh--hHHHHHHHhhhcCcEEEeechhHHHHH
Q 009511 464 AHVLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYEKL 503 (533)
Q Consensus 464 ~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~~~~~~~~ 503 (533)
+=+|++|+...+| ++-|+|.++.++|-||+++|.|--.+|
T Consensus 2 r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~L 43 (305)
T PF02374_consen 2 RILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAHSL 43 (305)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTHH
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCccH
Confidence 4578888877677 788899999999999999777765444
No 290
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=65.25 E-value=6.9 Score=34.74 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=24.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCc-EEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~-~v~~ 494 (533)
+.|++||++ +=+|+++|..|+++|. .|.+
T Consensus 1 ~~~li~Ga~--~~iG~~~~~~l~~~g~~~v~~ 30 (180)
T smart00822 1 GTYLITGGL--GGLGLELARWLAERGARHLVL 30 (180)
T ss_pred CEEEEEcCC--ChHHHHHHHHHHHhhCCeEEE
Confidence 458999999 6899999999999997 4555
No 291
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=65.22 E-value=5.2 Score=44.80 Aligned_cols=82 Identities=12% Similarity=0.101 Sum_probs=47.1
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHh--hhcCcEEEe-echhHHHHHhccCC------hhhc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL--CQMGIKVAT-ICKDDYEKLKLRIP------VEAQ 512 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~l--c~~~~~v~~-~~~~~~~~~~~~~~------~~~~ 512 (533)
+.+|.|+. +.+...+| +++-|.+||++ ++|+.|+... .+++.+|.+ +.-..---+-..+. +...
T Consensus 205 ~~~v~g~~---~~~~~~l~-~~d~v~fTGS~---~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa 277 (513)
T cd07128 205 LQLICGSV---GDLLDHLG-EQDVVAFTGSA---ATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFV 277 (513)
T ss_pred EEEecCCh---HHHhcccC-CCCEEEEECCH---HHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHH
Confidence 55666642 12444444 56789999999 9999999874 377888876 11111111111121 1223
Q ss_pred ccceecccccccCceeeE
Q 009511 513 HNLVLSTSYAAHKTVTMV 530 (533)
Q Consensus 513 ~~l~~~~~~~~~~~~~~~ 530 (533)
+.+++..-..+||.|.-.
T Consensus 278 ~~iv~~~f~~aGQ~C~a~ 295 (513)
T cd07128 278 KEVAREMTVKAGQKCTAI 295 (513)
T ss_pred HHHHHHHHHhcCCcccCC
Confidence 344455556789999743
No 292
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=64.89 E-value=6.5 Score=40.46 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=27.5
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.|++||++ +=+|++++..|.++|.+|..+
T Consensus 7 ~~vlVTGat--GfiG~~l~~~L~~~G~~V~~~ 36 (340)
T PLN02653 7 KVALITGIT--GQDGSYLTEFLLSKGYEVHGI 36 (340)
T ss_pred CEEEEECCC--CccHHHHHHHHHHCCCEEEEE
Confidence 579999999 689999999999999999873
No 293
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=64.65 E-value=32 Score=36.23 Aligned_cols=98 Identities=20% Similarity=0.217 Sum_probs=63.8
Q ss_pred HhcCCeEEEecccccccccccccceeeccCC-CCceeEEeeCCcchh-------hhhhhcC-CcCcceEEEeccccchhh
Q 009511 407 DAKGVKVISLGLLNQGEELNRNGEIYLERQP-NKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 477 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p-~~l~vrvv~g~~l~a-------a~v~~~i-p~~~~~v~l~g~~~~~k~ 477 (533)
+..|+|+++.--=|..+.|..-..+++--.| +..-+=++||+.||+ |+-.+-+ +++.+.|-+.|+. ..
T Consensus 63 ~~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~q 139 (325)
T TIGR02371 63 EMAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQ 139 (325)
T ss_pred CeEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HH
Confidence 4579999987555554444332233333333 366678899999974 2333555 7899999999998 89
Q ss_pred HHHHHHHhh--hcCcEEEe--echhHHHHHhccC
Q 009511 478 ANAVASSLC--QMGIKVAT--ICKDDYEKLKLRI 507 (533)
Q Consensus 478 ~~aia~~lc--~~~~~v~~--~~~~~~~~~~~~~ 507 (533)
|++-+.+|+ ++.-+|.+ .++|+=+.+.++.
T Consensus 140 A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~ 173 (325)
T TIGR02371 140 AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRA 173 (325)
T ss_pred HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHH
Confidence 999777766 55556666 5555555554443
No 294
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=64.52 E-value=7.9 Score=41.76 Aligned_cols=38 Identities=26% Similarity=0.272 Sum_probs=30.8
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeechhHHHHH
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKL 503 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~ 503 (533)
-|.|.++|+. ++|.++|.+|.++|.+|.+.++++.+.+
T Consensus 5 ~k~v~iiG~g---~~G~~~A~~l~~~G~~V~~~d~~~~~~~ 42 (450)
T PRK14106 5 GKKVLVVGAG---VSGLALAKFLKKLGAKVILTDEKEEDQL 42 (450)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchHHH
Confidence 3679999988 7999999999999999999555433333
No 295
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=63.85 E-value=13 Score=39.67 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=29.2
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+.|+.||++ +=||..|+..|-+||++|.-
T Consensus 5 ~~~~VcVTGAs--GfIgswivk~LL~rGY~V~g 35 (327)
T KOG1502|consen 5 EGKKVCVTGAS--GFIGSWIVKLLLSRGYTVRG 35 (327)
T ss_pred CCcEEEEeCCc--hHHHHHHHHHHHhCCCEEEE
Confidence 67899999999 68999999999999999988
No 296
>PRK08309 short chain dehydrogenase; Provisional
Probab=63.69 E-value=12 Score=35.89 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=28.6
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
.|++||++ + +|.+++..|+++|.+|.+ -++++-+.++.+
T Consensus 2 ~vlVtGGt--G-~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~ 42 (177)
T PRK08309 2 HALVIGGT--G-MLKRVSLWLCEKGFHVSVIARREVKLENVKRE 42 (177)
T ss_pred EEEEECcC--H-HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHH
Confidence 48999998 4 556799999999999988 334454555443
No 297
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=63.62 E-value=7.5 Score=40.13 Aligned_cols=29 Identities=21% Similarity=0.247 Sum_probs=26.8
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.|++||++ +=+|++++..|.++|.+|..
T Consensus 1 ~~vlVTGat--GfIG~~l~~~L~~~G~~V~~ 29 (343)
T TIGR01472 1 KIALITGIT--GQDGSYLAEFLLEKGYEVHG 29 (343)
T ss_pred CeEEEEcCC--CcHHHHHHHHHHHCCCEEEE
Confidence 468999999 58999999999999999997
No 298
>PRK06199 ornithine cyclodeaminase; Validated
Probab=63.58 E-value=27 Score=37.72 Aligned_cols=122 Identities=16% Similarity=0.192 Sum_probs=79.0
Q ss_pred HhcCCeEEEecccccccccccccceeeccCC-CCceeEEeeCCcchh-------hhhhhcC-CcCcceEEEeccccchhh
Q 009511 407 DAKGVKVISLGLLNQGEELNRNGEIYLERQP-NKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 477 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p-~~l~vrvv~g~~l~a-------a~v~~~i-p~~~~~v~l~g~~~~~k~ 477 (533)
+..|+|++|.--=|....|...-.+++--+| +..-.=++||+.||+ |+-.+-+ +++.+.+-+.|+. ..
T Consensus 90 ~~~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~Q 166 (379)
T PRK06199 90 RTAGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VM 166 (379)
T ss_pred ceeEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HH
Confidence 3478999997766776556555555555555 366778899999974 3445666 7899999999998 88
Q ss_pred HHHHHHHhhh-c-Cc-EEEe--echhHHHHHhccCChhhcccc-ee-ccccc-ccCceeeEe
Q 009511 478 ANAVASSLCQ-M-GI-KVAT--ICKDDYEKLKLRIPVEAQHNL-VL-STSYA-AHKTVTMVT 531 (533)
Q Consensus 478 ~~aia~~lc~-~-~~-~v~~--~~~~~~~~~~~~~~~~~~~~l-~~-~~~~~-~~~~~~~~~ 531 (533)
||.-+.++|+ + ++ +|.+ -+.++=+++.+++..+..+.. +. +.+-+ +.+.|.+|.
T Consensus 167 A~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVv 228 (379)
T PRK06199 167 GKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVT 228 (379)
T ss_pred HHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEE
Confidence 9999999995 3 34 5555 444555555555544332211 32 23443 345566553
No 299
>PF00857 Isochorismatase: Isochorismatase family; InterPro: IPR000868 This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate (3.3.2.1 from EC).; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1XN4_A 3KL2_F 1YZV_A 3IRV_A 1IM5_A 1ILW_A 3PL1_A 1NF9_A 1NF8_A 1X9G_A ....
Probab=63.49 E-value=50 Score=30.48 Aligned_cols=102 Identities=22% Similarity=0.205 Sum_probs=60.9
Q ss_pred chhhhHhHHHHHHHHHHHHhcCCeEEEeccccc---------------ccccccccceeec-cCCCCceeEEeeCCc---
Q 009511 389 PWRREAINSLIEEAILEADAKGVKVISLGLLNQ---------------GEELNRNGEIYLE-RQPNKLKIKVVDGSS--- 449 (533)
Q Consensus 389 ~~~~~~in~~ie~ai~~a~~~g~kv~slg~ln~---------------~~~ln~~g~l~~~-~~p~~l~vrvv~g~~--- 449 (533)
+.+.+.+-+-|.+.+..|.+.|+.|+----.++ .-.....|.-++. -.| ...-.+++=++
T Consensus 19 ~~~~~~~i~~i~~l~~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~-~~~~~vi~K~~~sa 97 (174)
T PF00857_consen 19 PPNAEAIIPNINRLLDAARAAGVPVIHTRDIHDSPHWSGPFEPKPWPPHCIPGSPGAELVPELAP-QPGDPVIEKNRYSA 97 (174)
T ss_dssp STTHHHHHHHHHHHHHHHHHTTEEEEEEEESBSTTTTTTSGGHSCHTSCSBTTSGGGSBHGGGHC-HTTSEEEEESSSST
T ss_pred ccCHHHHHHHHHHHHHHHHHhCCCeEEEEeeecccccccccccccccccccCCCCccceeeEeec-ccccceEEeecccc
Confidence 445566667778888888999999987776666 0011112222222 112 11223332111
Q ss_pred ch---hhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 450 LA---AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 450 l~---aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.. -...|++ .++++|.++|-.+ +=-=.+.|..+.++|++|.+
T Consensus 98 f~~t~L~~~L~~--~gi~~vil~G~~t-~~CV~~Ta~~a~~~g~~v~v 142 (174)
T PF00857_consen 98 FFGTDLDEILRK--RGIDTVILCGVAT-DVCVLATARDAFDRGYRVIV 142 (174)
T ss_dssp TTTSSHHHHHHH--TTESEEEEEEEST-TTHHHHHHHHHHHTT-EEEE
T ss_pred cccccccccccc--cccceEEEccccc-CcEEehhHHHHHHCCCEEEE
Confidence 10 1223444 6889999999987 45458999999999999999
No 300
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=63.23 E-value=7.1 Score=43.27 Aligned_cols=88 Identities=14% Similarity=0.040 Sum_probs=51.4
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhh-cccce
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLV 516 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~ 516 (533)
+=-+.+|+|+.-.++.-|=+ -++++-|.+||++ ++|+.|+....++..+|.+ +.-..---+-+.+.-|. -+.++
T Consensus 203 ~gvv~vv~g~~~~~~~~l~~-~~~v~~v~FTGS~---~~G~~i~~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~ 278 (482)
T PRK11241 203 AGVFNVVTGSAGAVGGELTS-NPLVRKLSFTGST---EIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAL 278 (482)
T ss_pred cccEEEEecCCchhHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHH
Confidence 44477888764332222222 3488999999999 9999999998888888877 11111000001122221 23344
Q ss_pred ecccccccCceeeE
Q 009511 517 LSTSYAAHKTVTMV 530 (533)
Q Consensus 517 ~~~~~~~~~~~~~~ 530 (533)
...-+.+||.|.-.
T Consensus 279 ~~~f~~aGQ~C~a~ 292 (482)
T PRK11241 279 ASKFRNAGQTCVCA 292 (482)
T ss_pred HHHHhcCCCCCccC
Confidence 44556799999754
No 301
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=63.01 E-value=9 Score=39.94 Aligned_cols=60 Identities=27% Similarity=0.319 Sum_probs=43.1
Q ss_pred eCCcchhhhhhhcCCcCc--ceEEEeccccchhhHHHHHHHhhhcCc-EEEe-e-chhHHHHHhccCC
Q 009511 446 DGSSLAAAVVVNSLPKTT--AHVLLRGTVTANKVANAVASSLCQMGI-KVAT-I-CKDDYEKLKLRIP 508 (533)
Q Consensus 446 ~g~~l~aa~v~~~ip~~~--~~v~l~g~~~~~k~~~aia~~lc~~~~-~v~~-~-~~~~~~~~~~~~~ 508 (533)
||..+..+..=+.+|.+. ++|++.|+.. -||||+.+|.+.|+ +|.+ + +.+|.+++.+..+
T Consensus 107 D~~G~~~~L~~~~~~~~~~~~~vlilGAGG---AarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 107 DGIGFLRALKEFGLPVDVTGKRVLILGAGG---AARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred CHHHHHHHHHhcCCCcccCCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 455555554444555564 8899999995 49999999999996 5777 3 3677787776644
No 302
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=62.80 E-value=9.9 Score=42.70 Aligned_cols=43 Identities=23% Similarity=0.386 Sum_probs=35.1
Q ss_pred CcC-cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhc
Q 009511 460 PKT-TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (533)
Q Consensus 460 p~~-~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~ 505 (533)
|.+ .+.|..+|.. ++|+.+|..|.++|++|++ .++|+-+++++
T Consensus 413 ~~~~~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~ 458 (558)
T PRK10669 413 PVDICNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELRE 458 (558)
T ss_pred ccccCCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Confidence 444 4689999998 9999999999999999998 55666666654
No 303
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=62.64 E-value=7.9 Score=42.25 Aligned_cols=87 Identities=15% Similarity=0.104 Sum_probs=51.5
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccce
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLV 516 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~ 516 (533)
+=-+.+|.|+.-.+.-.|-+-| +++-|.+||.+ ++|++|+....+++.+|.+ +.-...-=+-+.+..+ ..+.++
T Consensus 176 ~~vv~~v~g~~~~~~~~l~~~~-~i~~V~ftGs~---~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~ 251 (457)
T cd07114 176 PGVVNVVTGFGPETGEALVEHP-LVAKIAFTGGT---ETGRHIARAAAENLAPVTLELGGKSPNIVFDDADLDAAVNGVV 251 (457)
T ss_pred CCcEEEEeCCCchHHHHHhcCC-CCCEEEEECCH---HHHHHHHHHHHhcCCeEEEecCCCCeeEECCCCCHHHHHHHHH
Confidence 4446677775433333333333 77889999988 9999999998888888887 1111110011112222 234444
Q ss_pred ecccccccCceee
Q 009511 517 LSTSYAAHKTVTM 529 (533)
Q Consensus 517 ~~~~~~~~~~~~~ 529 (533)
.+.-..+||.|.-
T Consensus 252 ~~~~~~~GQ~C~a 264 (457)
T cd07114 252 AGIFAAAGQTCVA 264 (457)
T ss_pred HHHHhccCCCCCC
Confidence 5555568999963
No 304
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=62.59 E-value=12 Score=39.09 Aligned_cols=120 Identities=21% Similarity=0.141 Sum_probs=68.1
Q ss_pred HhcCCeEEEecccccccccccc-cceeeccCCCCceeEEeeCCcchh-------hhhhhcC-CcCcceEEEeccccchhh
Q 009511 407 DAKGVKVISLGLLNQGEELNRN-GEIYLERQPNKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 477 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln~~-g~l~~~~~p~~l~vrvv~g~~l~a-------a~v~~~i-p~~~~~v~l~g~~~~~k~ 477 (533)
+-.|+|++|.--=|....|... |.+.+.--.+..-+=++||+.||+ |+..+-+ |++.+.+.+.|+. ..
T Consensus 63 ~~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~Q 139 (313)
T PF02423_consen 63 PVAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQ 139 (313)
T ss_dssp TEEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HH
T ss_pred cEEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HH
Confidence 4789999998877777766543 444443222355566999999974 2333333 7899999999998 99
Q ss_pred HHHHHHHhhh-cCcEEEe---echhHHHHHhccCChhhcccceeccccc-ccCceeeE
Q 009511 478 ANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-AHKTVTMV 530 (533)
Q Consensus 478 ~~aia~~lc~-~~~~v~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~ 530 (533)
|+.-+.++|+ ++++-+. -++++=+++..++.. ..-..+.+.+-+ +...|.+|
T Consensus 140 A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii 196 (313)
T PF02423_consen 140 ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADII 196 (313)
T ss_dssp HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEE
T ss_pred HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEE
Confidence 9999999983 5565444 444555555554333 212222333433 33555554
No 305
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=62.48 E-value=6.6 Score=42.80 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=47.9
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCC-hhhcccceecc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP-VEAQHNLVLST 519 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~-~~~~~~l~~~~ 519 (533)
+.+|.|+.-..+-.|-+- ++++-|++||.+ ++|+.|+....++..+|.+ +.-..--=+-+.+. +...+.++...
T Consensus 177 ~~~v~g~~~~~~~~l~~~-~~id~v~fTGs~---~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~ 252 (453)
T cd07115 177 LNVVTGFGEVAGAALVEH-PDVDKITFTGST---AVGRKIMQGAAGNLKRVSLELGGKSANIVFADADLDAAVRAAATGI 252 (453)
T ss_pred eEEEecCchhHHHHHhcC-CCCCEEEEECcH---HHHHHHHHHHhhcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHH
Confidence 667776543222222222 378889999999 9999999987787888877 11110000001121 22234444455
Q ss_pred cccccCceee
Q 009511 520 SYAAHKTVTM 529 (533)
Q Consensus 520 ~~~~~~~~~~ 529 (533)
-+.+||.|.-
T Consensus 253 ~~~~GQ~C~a 262 (453)
T cd07115 253 FYNQGQMCTA 262 (453)
T ss_pred HhccCCCCCC
Confidence 5568999974
No 306
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=62.43 E-value=15 Score=33.18 Aligned_cols=42 Identities=26% Similarity=0.290 Sum_probs=30.5
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcC-cEEEe--echhHHHHHhc
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKL 505 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~-~~v~~--~~~~~~~~~~~ 505 (533)
...+.|.++|.. .+|+++|.+|++.| .+|.+ -+.++-+++.+
T Consensus 17 ~~~~~i~iiG~G---~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~ 61 (155)
T cd01065 17 LKGKKVLILGAG---GAARAVAYALAELGAAKIVIVNRTLEKAKALAE 61 (155)
T ss_pred CCCCEEEEECCc---HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Confidence 455789999985 89999999999986 67777 33344444433
No 307
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=62.20 E-value=6.6 Score=43.05 Aligned_cols=50 Identities=16% Similarity=0.135 Sum_probs=34.6
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.+|+|+.-.++-.|-+-| +++-|++||++ ++|+.|+....++..++.+
T Consensus 192 v~~~v~g~~~~~~~~L~~~~-~v~~V~fTGs~---~~g~~v~~~a~~~l~~~~l 241 (467)
T TIGR01804 192 VFNVVLGKGAEVGEPLVNHK-DVAKVSFTGGV---PTGKKIMAAAADHLKHVTM 241 (467)
T ss_pred cEEEEeCCcHHHHHHHhcCC-CCCEEEEECcH---HHHHHHHHHHHhcCCcEEE
Confidence 36667665322222222222 78899999999 8999999988787777777
No 308
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=62.16 E-value=7.6 Score=42.56 Aligned_cols=65 Identities=12% Similarity=0.064 Sum_probs=39.1
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhh-cccceecccccccCceee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~ 529 (533)
+++-|.+||++ ++|+.|+.+..++..+|.+ +.-...--+-+.+.-|. -+.++.+.-+.+||.|.-
T Consensus 209 ~v~~v~fTGs~---~~g~~i~~~aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a 275 (466)
T cd07138 209 DVDMVSFTGST---RAGKRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNA 275 (466)
T ss_pred CCCEEEEECcH---HHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcC
Confidence 78889999998 9999999998888888877 11000000001122222 222334445568898864
No 309
>PRK12377 putative replication protein; Provisional
Probab=62.13 E-value=12 Score=38.15 Aligned_cols=51 Identities=20% Similarity=0.305 Sum_probs=36.9
Q ss_pred hhhcCCcCcceEEEeccccchh--hHHHHHHHhhhcCcEEEee-chhHHHHHhc
Q 009511 455 VVNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVATI-CKDDYEKLKL 505 (533)
Q Consensus 455 v~~~ip~~~~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~-~~~~~~~~~~ 505 (533)
+.++...+..-++|.|.+..+| ++.|||..||++|.+|..+ -.|-.+.|+.
T Consensus 93 ~a~~~~~~~~~l~l~G~~GtGKThLa~AIa~~l~~~g~~v~~i~~~~l~~~l~~ 146 (248)
T PRK12377 93 IADELMTGCTNFVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTVPDVMSRLHE 146 (248)
T ss_pred HHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHHcCCCeEEEEHHHHHHHHHH
Confidence 3344444456789999876678 9999999999999999873 3444455554
No 310
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=62.11 E-value=7.9 Score=42.08 Aligned_cols=84 Identities=18% Similarity=0.186 Sum_probs=49.0
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCCh-hhcccceec
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV-EAQHNLVLS 518 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~-~~~~~l~~~ 518 (533)
-+.+|+|++-++..++.. ++++-|.+||.+ .+|+.|+.+..++-.+|.+ +.-...--+-+.+.. ...+.++.+
T Consensus 175 ~~~~v~g~~~~~~~L~~~--~~v~~V~fTGs~---~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~ 249 (452)
T cd07102 175 VFQVLHLSHETSAALIAD--PRIDHVSFTGSV---AGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDG 249 (452)
T ss_pred cEEEEeCCchhHHHHhcC--CCCCEEEEECcH---HHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHH
Confidence 366777765233333332 578889999998 8899999988888788876 111111001111222 223344455
Q ss_pred ccccccCceee
Q 009511 519 TSYAAHKTVTM 529 (533)
Q Consensus 519 ~~~~~~~~~~~ 529 (533)
.-+.+||.|.-
T Consensus 250 ~~~~~GQ~C~a 260 (452)
T cd07102 250 AFFNSGQSCCS 260 (452)
T ss_pred HHHhCCCCCcC
Confidence 55668888863
No 311
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=61.84 E-value=6.9 Score=42.71 Aligned_cols=49 Identities=18% Similarity=0.236 Sum_probs=35.0
Q ss_pred CceeEEeeCCcch-hhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 439 KLKIKVVDGSSLA-AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 439 ~l~vrvv~g~~l~-aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+=-+.+|.|..-. ...++.. .+-|.+||.+ ++|+.|+....++.++|.+
T Consensus 175 ~gv~~~v~g~~~~~~~~l~~~----~~~V~fTGs~---~~g~~i~~~aa~~~~~~~l 224 (454)
T cd07101 175 RDLWQVVTGPGSEVGGAIVDN----ADYVMFTGST---ATGRVVAERAGRRLIGCSL 224 (454)
T ss_pred CCcEEEEeCCcHHHHHHHHhC----CCEEEEECCH---HHHHHHHHHHHhcCCcEEE
Confidence 3337788875433 2333332 3569999998 9999999998888888877
No 312
>PLN00016 RNA-binding protein; Provisional
Probab=61.78 E-value=7.5 Score=41.03 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=29.8
Q ss_pred cCcceEEEe----ccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 461 KTTAHVLLR----GTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 461 ~~~~~v~l~----g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.+.+.|++| |+| +.+|+.++..|.++|.+|..++
T Consensus 50 ~~~~~VLVt~~~~Gat--G~iG~~lv~~L~~~G~~V~~l~ 87 (378)
T PLN00016 50 VEKKKVLIVNTNSGGH--AFIGFYLAKELVKAGHEVTLFT 87 (378)
T ss_pred cccceEEEEeccCCCc--eeEhHHHHHHHHHCCCEEEEEe
Confidence 345679999 999 6999999999999999999843
No 313
>PLN02778 3,5-epimerase/4-reductase
Probab=61.48 E-value=11 Score=38.81 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=28.9
Q ss_pred CCc-CcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 459 LPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 459 ip~-~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-|. .++.|++||++ +=+|+.++.+|.++|.+|..
T Consensus 4 ~~~~~~~kiLVtG~t--GfiG~~l~~~L~~~g~~V~~ 38 (298)
T PLN02778 4 TAGSATLKFLIYGKT--GWIGGLLGKLCQEQGIDFHY 38 (298)
T ss_pred CCCCCCCeEEEECCC--CHHHHHHHHHHHhCCCEEEE
Confidence 344 34579999999 68999999999999999975
No 314
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=61.31 E-value=6.7 Score=44.99 Aligned_cols=85 Identities=9% Similarity=0.143 Sum_probs=49.4
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceec
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLS 518 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~ 518 (533)
-+.+|.|+.=++..++. .++++-|++||++ .+|+.|+....+++.+|.+ +.-..---+-+.|..| .-+.++..
T Consensus 308 vvnvV~G~~~~~~~L~~--~~~Vd~V~FTGSt---~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g 382 (604)
T PLN02419 308 VLNIVHGTNDTVNAICD--DEDIRAVSFVGSN---TAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAA 382 (604)
T ss_pred eEEEEeCChHHHHHHHh--CCCCCEEEEeCCh---HHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 36677775322222211 4588899999999 8999999987788889887 1111100011112222 22333444
Q ss_pred ccccccCceeeE
Q 009511 519 TSYAAHKTVTMV 530 (533)
Q Consensus 519 ~~~~~~~~~~~~ 530 (533)
.-+.+||.|.-.
T Consensus 383 ~f~naGQ~C~A~ 394 (604)
T PLN02419 383 GFGAAGQRCMAL 394 (604)
T ss_pred HHhhCCCCcCCC
Confidence 445799999743
No 315
>PRK05855 short chain dehydrogenase; Validated
Probab=61.28 E-value=13 Score=40.66 Aligned_cols=32 Identities=16% Similarity=0.215 Sum_probs=28.1
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.+.+++||++ +=+|+++|..|.++|.+|++.+
T Consensus 315 ~~~~lv~G~s--~giG~~~a~~l~~~G~~v~~~~ 346 (582)
T PRK05855 315 GKLVVVTGAG--SGIGRETALAFAREGAEVVASD 346 (582)
T ss_pred CCEEEEECCc--CHHHHHHHHHHHHCCCEEEEEe
Confidence 3568999999 6999999999999999998833
No 316
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=61.23 E-value=7.7 Score=42.58 Aligned_cols=87 Identities=13% Similarity=0.087 Sum_probs=49.3
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccce
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLV 516 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~ 516 (533)
.=-+.+|+|..-.++-.|-+ .++++-|.+||.+ ++|++|+....+.+.+|.+ +.-..--=+-+.+..| .-+.++
T Consensus 192 ~gvv~~v~g~~~~~~~~L~~-~~~vd~V~ftGs~---~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~ 267 (478)
T cd07131 192 PGVVNVVHGRGEEVGEALVE-HPDVDVVSFTGST---EVGERIGETCARPNKRVALEMGGKNPIIVMDDADLDLALEGAL 267 (478)
T ss_pred CCcEEEEecCchHHHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHH
Confidence 33466777754322222222 2378899999999 9999999988888888776 1100000000112222 223344
Q ss_pred ecccccccCceee
Q 009511 517 LSTSYAAHKTVTM 529 (533)
Q Consensus 517 ~~~~~~~~~~~~~ 529 (533)
...-+.+||.|.-
T Consensus 268 ~~~~~~~GQ~C~a 280 (478)
T cd07131 268 WSAFGTTGQRCTA 280 (478)
T ss_pred HHHHhcCCCCCCC
Confidence 5555678898864
No 317
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=61.05 E-value=6.3 Score=43.21 Aligned_cols=49 Identities=12% Similarity=0.151 Sum_probs=34.6
Q ss_pred eeEEeeCCcc-hhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhh--cCcEEEe
Q 009511 441 KIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l-~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~--~~~~v~~ 494 (533)
-+.+|.|+.- +...+++. ++++-|.+||++ ..|+.|+....+ ...+|++
T Consensus 170 vv~~v~g~~~~~~~~L~~~--~~v~~V~fTGs~---~~G~~i~~~aa~~~~~~p~~l 221 (454)
T cd07129 170 VFSLLQGGGREVGVALVKH--PAIKAVGFTGSR---RGGRALFDAAAARPEPIPFYA 221 (454)
T ss_pred heEEeeCCcHHHHHHHhcC--CCccEEEEeCCh---HHHHHHHHHhhccCccceeEe
Confidence 3667777442 22333332 478899999998 889999998887 4777777
No 318
>PLN02206 UDP-glucuronate decarboxylase
Probab=61.03 E-value=9.7 Score=41.71 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=27.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.||+||++ +=||+.++.+|.++|.+|..+
T Consensus 120 ~kILVTGat--GfIGs~Lv~~Ll~~G~~V~~l 149 (442)
T PLN02206 120 LRVVVTGGA--GFVGSHLVDRLMARGDSVIVV 149 (442)
T ss_pred CEEEEECcc--cHHHHHHHHHHHHCcCEEEEE
Confidence 579999999 699999999999999999984
No 319
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=60.91 E-value=7 Score=43.03 Aligned_cols=84 Identities=12% Similarity=0.157 Sum_probs=48.5
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhh-cccceec
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVLS 518 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~~~ 518 (533)
-+.+|.|+.=++..+++ -++++-|++||++ ++|++|+....+++.+|.+ +.-..---+-+.+..|. -+.++.+
T Consensus 201 vv~~v~g~~~~~~~L~~--~~~v~~V~fTGS~---~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~ 275 (477)
T cd07113 201 VLNVVNGKGAVGAQLIS--HPDVAKVSFTGSV---ATGKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTA 275 (477)
T ss_pred cEEEEecCchHHHHHhc--CCCCCEEEEECcH---HHHHHHHHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHH
Confidence 36677664422222222 3467889999999 8999999988788888876 11110000111133332 2334444
Q ss_pred ccccccCceee
Q 009511 519 TSYAAHKTVTM 529 (533)
Q Consensus 519 ~~~~~~~~~~~ 529 (533)
.-+.+||.|.-
T Consensus 276 ~f~~~GQ~C~a 286 (477)
T cd07113 276 GFLHQGQVCAA 286 (477)
T ss_pred HHhhCCCCCcC
Confidence 45678999864
No 320
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=60.91 E-value=8.5 Score=44.54 Aligned_cols=49 Identities=18% Similarity=0.322 Sum_probs=34.2
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHh-h-hcCcEEEe
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL-C-QMGIKVAT 494 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~l-c-~~~~~v~~ 494 (533)
+=-+.+|+|+ .+.++..+| +.+-|.+||++ ++|+.|+... | +++.+|.+
T Consensus 202 ~gv~~~v~g~---~~~~~~~~~-~~~~V~FTGS~---~~G~~i~~~aaaa~~~~~~~l 252 (663)
T TIGR02278 202 EGSLQLICGS---AGDLLDHLD-HRDVVAFTGSA---ATADRLRAHPNVLERGIRFNA 252 (663)
T ss_pred CCcEEEEeCC---hHHHHhcCC-CCCEEEEECCH---HHHHHHHHhHhHHhcCceEEE
Confidence 3345677775 222444444 45789999999 9999999863 3 78888877
No 321
>PF00258 Flavodoxin_1: Flavodoxin; InterPro: IPR008254 This domain is found in a number of proteins including flavodoxin and nitric-oxide synthase. Flavodoxins are electron-transfer proteins that function in various electron transport systems. They bind one FMN molecule, which serves as a redox-active prosthetic group [] and are functionally interchangeable with ferredoxins. They have been isolated from prokaryotes, cyanobacteria, and some eukaryotic algae. Nitric oxide synthase (1.14.13.39 from EC) produces nitric oxide from L-arginie and NADPH. Nitric oxide acts as a messenger molecule in the body.; GO: 0010181 FMN binding, 0016491 oxidoreductase activity; PDB: 2WC1_A 2FVX_A 2FOX_A 6NUL_A 1FVX_A 2FAX_A 1FLN_A 1FLA_A 4NLL_A 2FDX_A ....
Probab=60.65 E-value=6.2 Score=35.52 Aligned_cols=34 Identities=29% Similarity=0.551 Sum_probs=27.8
Q ss_pred EeccccchhhHHHHHHHhhhcCcEEEeechhHHHHH
Q 009511 468 LRGTVTANKVANAVASSLCQMGIKVATICKDDYEKL 503 (533)
Q Consensus 468 l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~ 503 (533)
.||+| -++|++||..|.++|++|.+.+-++++..
T Consensus 6 ~tG~t--e~~A~~ia~~l~~~g~~~~~~~~~~~~~~ 39 (143)
T PF00258_consen 6 MTGNT--EKMAEAIAEGLRERGVEVRVVDLDDFDDS 39 (143)
T ss_dssp SSSHH--HHHHHHHHHHHHHTTSEEEEEEGGGSCHH
T ss_pred CchhH--HHHHHHHHHHHHHcCCceeeechhhhhhh
Confidence 37888 69999999999999999888566666543
No 322
>PRK08939 primosomal protein DnaI; Reviewed
Probab=60.53 E-value=13 Score=38.89 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=33.4
Q ss_pred cceEEEeccccchh--hHHHHHHHhhhcCcEEEeec-hhHHHHHhcc
Q 009511 463 TAHVLLRGTVTANK--VANAVASSLCQMGIKVATIC-KDDYEKLKLR 506 (533)
Q Consensus 463 ~~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~-~~~~~~~~~~ 506 (533)
.+-++|.|.+..+| ++.|||..||++|++|..++ .+-...|+..
T Consensus 156 ~~gl~L~G~~G~GKThLa~Aia~~l~~~g~~v~~~~~~~l~~~lk~~ 202 (306)
T PRK08939 156 VKGLYLYGDFGVGKSYLLAAIANELAKKGVSSTLLHFPEFIRELKNS 202 (306)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEEHHHHHHHHHHH
Confidence 35679998887778 99999999999999998733 3334555543
No 323
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=60.43 E-value=10 Score=38.78 Aligned_cols=29 Identities=28% Similarity=0.409 Sum_probs=27.1
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|.|+.||.. +=+|++.+..|.+||++|+.
T Consensus 6 Kna~vtgga--gGIGl~~sk~Ll~kgik~~~ 34 (261)
T KOG4169|consen 6 KNALVTGGA--GGIGLATSKALLEKGIKVLV 34 (261)
T ss_pred ceEEEecCC--chhhHHHHHHHHHcCchhee
Confidence 678999999 68999999999999999998
No 324
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=60.40 E-value=8 Score=42.28 Aligned_cols=87 Identities=10% Similarity=0.080 Sum_probs=49.4
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhh-cccce
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLV 516 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~ 516 (533)
.=-+.+|.|+.-.++..|-+ .++++-|.+||++ +.|+.|+....++..+|.+ +.-...--+-+.+.-|. .+.++
T Consensus 190 ~gvv~~v~g~~~~~~~~l~~-~~~v~~V~ftGs~---~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv 265 (468)
T cd07088 190 AGVLNIVTGRGSVVGDALVA-HPKVGMISLTGST---EAGQKIMEAAAENITKVSLELGGKAPAIVMKDADLDLAVKAIV 265 (468)
T ss_pred ccceEEEecCchHHHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHH
Confidence 33456676654322222222 2378889999998 8999999988788878877 11100000011122222 23444
Q ss_pred ecccccccCceee
Q 009511 517 LSTSYAAHKTVTM 529 (533)
Q Consensus 517 ~~~~~~~~~~~~~ 529 (533)
.+.-+.+||.|.-
T Consensus 266 ~~~~~~~GQ~C~a 278 (468)
T cd07088 266 DSRIINCGQVCTC 278 (468)
T ss_pred HHHhcccCcCCcC
Confidence 5556678898864
No 325
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=60.37 E-value=15 Score=37.84 Aligned_cols=40 Identities=13% Similarity=0.299 Sum_probs=32.5
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~ 505 (533)
.+.|-+.|+. .+|.+||..|.+.|.+|.+ .+++.-+++++
T Consensus 4 ~~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~ 45 (311)
T PRK06130 4 IQNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARG 45 (311)
T ss_pred ccEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 3568888998 8999999999999999998 45566666654
No 326
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=59.66 E-value=9.2 Score=39.02 Aligned_cols=27 Identities=22% Similarity=0.453 Sum_probs=24.3
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.|++||++ +-||++++..|+++| +|..
T Consensus 2 ~iLVtG~~--GfiGs~l~~~L~~~g-~V~~ 28 (299)
T PRK09987 2 NILLFGKT--GQVGWELQRALAPLG-NLIA 28 (299)
T ss_pred eEEEECCC--CHHHHHHHHHhhccC-CEEE
Confidence 58999999 699999999999999 7765
No 327
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=59.65 E-value=8.1 Score=42.66 Aligned_cols=48 Identities=21% Similarity=0.220 Sum_probs=34.2
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+|+|+.-++. .|-+ -++++-|++||++ ++|+.|+....++..+|.+
T Consensus 202 v~~v~g~~~~~~-~L~~-~~~vd~V~fTGS~---~~g~~i~~~aa~~l~~~~l 249 (488)
T PRK13252 202 FNVVQGDGRVGA-WLTE-HPDIAKVSFTGGV---PTGKKVMAAAAASLKEVTM 249 (488)
T ss_pred EEEEecCcHHHH-HHhc-CCCCCEEEEECcH---HHHHHHHHHHhhcCCcEEE
Confidence 566766553222 2222 2378899999999 8999999987777778776
No 328
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=59.51 E-value=8.1 Score=42.56 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=47.5
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCCh-hhcccceecc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV-EAQHNLVLST 519 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~-~~~~~l~~~~ 519 (533)
+.+|+|+.-+.+.+. -.++++-|.+||++ .+|+.|+.+..++..+|.+ +.-...-=+-+.+.- ...+.++.+.
T Consensus 197 v~~v~g~~~~~~~L~--~~~~vd~v~fTGs~---~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~ 271 (478)
T cd07086 197 VNLVTGGGDGGELLV--HDPRVPLVSFTGST---EVGRRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAA 271 (478)
T ss_pred eEEEecCchhHHHHh--cCCCCCEEEEECcH---HHHHHHHHHHhccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHH
Confidence 555655443222221 13478889999999 8999999998888888877 111100000011221 2223444555
Q ss_pred cccccCceee
Q 009511 520 SYAAHKTVTM 529 (533)
Q Consensus 520 ~~~~~~~~~~ 529 (533)
-+.+||.|.-
T Consensus 272 ~~~~GQ~C~a 281 (478)
T cd07086 272 VGTAGQRCTT 281 (478)
T ss_pred HhccCCCCcC
Confidence 5678899864
No 329
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=59.34 E-value=30 Score=36.33 Aligned_cols=98 Identities=19% Similarity=0.121 Sum_probs=59.5
Q ss_pred HhcCCeEEEecccccccccccccceeeccCCC-CceeEE-eeCCcchh-------hhhhhcC-CcCcceEEEeccccchh
Q 009511 407 DAKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKV-VDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANK 476 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p~-~l~vrv-v~g~~l~a-------a~v~~~i-p~~~~~v~l~g~~~~~k 476 (533)
+..|+|+++-=--|....|-..-.+.+--.|. +--.-+ .||+.||+ |+-...+ +++.+.|.+.|+. .
T Consensus 63 ~~~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~~~ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGaG---~ 139 (326)
T TIGR02992 63 DGFAIKVSPGFFDNPKLGLPSLNGMMVLLSSRTGLLQALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGAG---M 139 (326)
T ss_pred CceEEEEecccCCccccCCCceeEEEEEEECCCCCceEEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCC---H
Confidence 44788988854445443443333344444441 211233 49988864 1222223 6788999999998 8
Q ss_pred hHHHHHHHhh-hcCcE-EEe--echhHHHHHhccC
Q 009511 477 VANAVASSLC-QMGIK-VAT--ICKDDYEKLKLRI 507 (533)
Q Consensus 477 ~~~aia~~lc-~~~~~-v~~--~~~~~~~~~~~~~ 507 (533)
.||+.+.+|| .++++ |.+ -+.++-+++.++.
T Consensus 140 qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~ 174 (326)
T TIGR02992 140 QARLQLEALTLVRDIRSARIWARDSAKAEALALQL 174 (326)
T ss_pred HHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHH
Confidence 9999999999 58865 555 3445555555554
No 330
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=59.33 E-value=16 Score=35.78 Aligned_cols=29 Identities=28% Similarity=0.316 Sum_probs=26.8
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.|.+.|.. ++|+++|..|.+.|.+|++
T Consensus 28 gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv 56 (200)
T cd01075 28 GKTVAVQGLG---KVGYKLAEHLLEEGAKLIV 56 (200)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence 3679999998 9999999999999999998
No 331
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=59.33 E-value=17 Score=30.40 Aligned_cols=39 Identities=18% Similarity=0.155 Sum_probs=30.8
Q ss_pred EEeccccchhhHHHHHHHhhhcC---cEEEe---echhHHHHHhccCC
Q 009511 467 LLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIP 508 (533)
Q Consensus 467 ~l~g~~~~~k~~~aia~~lc~~~---~~v~~---~~~~~~~~~~~~~~ 508 (533)
-+.|.. ++|.|++..|.+.| -+|.+ -+.|+-++++++.+
T Consensus 3 ~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~ 47 (96)
T PF03807_consen 3 GIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG 47 (96)
T ss_dssp EEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred EEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence 345776 99999999999999 99995 45666677777766
No 332
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=59.22 E-value=15 Score=35.39 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=30.3
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEeechhHHHHHhc
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKL 505 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~~~ 505 (533)
.-|+|...|-. |+|+.+|.+|-..|.+|.+...|-...+|.
T Consensus 22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA 62 (162)
T PF00670_consen 22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQA 62 (162)
T ss_dssp TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHH
T ss_pred CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHh
Confidence 45788889988 999999999999999999966665555543
No 333
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=59.16 E-value=13 Score=41.75 Aligned_cols=69 Identities=16% Similarity=0.110 Sum_probs=47.2
Q ss_pred CcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHH-----------hcc--CChhhcc----cceeccc
Q 009511 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL-----------KLR--IPVEAQH----NLVLSTS 520 (533)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~-----------~~~--~~~~~~~----~l~~~~~ 520 (533)
+.+.+.|-+.|+. .+|..||..|++.|++|.+ .+.|.-++. .++ +.++..+ ++.-+++
T Consensus 4 ~~~i~~V~VIGaG---~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~ 80 (507)
T PRK08268 4 LPSIATVAVIGAG---AMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEA 80 (507)
T ss_pred cCCCCEEEEECCC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCC
Confidence 3467889999998 8999999999999999999 555555542 222 2222222 2334457
Q ss_pred ccccCceeeEe
Q 009511 521 YAAHKTVTMVT 531 (533)
Q Consensus 521 ~~~~~~~~~~~ 531 (533)
+.+...|.+|.
T Consensus 81 ~~~~~~aDlVi 91 (507)
T PRK08268 81 LADLADCDLVV 91 (507)
T ss_pred HHHhCCCCEEE
Confidence 87777888774
No 334
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=59.06 E-value=8.6 Score=42.22 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=34.1
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+|.|+.-.+.-.|-+ -++++-|.+||++ .+|+.|+....+++.++.+
T Consensus 197 ~~~v~g~~~~~~~~l~~-~~~vd~V~fTGs~---~~g~~i~~~aa~~~~~~~l 245 (475)
T PRK13473 197 LNVVTGRGATVGDALVG-HPKVRMVSLTGSI---ATGKHVLSAAADSVKRTHL 245 (475)
T ss_pred EEEEecCchHHHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHhhcCCcEEE
Confidence 55666643322222222 2378899999999 8999999988788888876
No 335
>PRK08181 transposase; Validated
Probab=58.94 E-value=7.9 Score=39.93 Aligned_cols=45 Identities=29% Similarity=0.301 Sum_probs=34.4
Q ss_pred CcCcceEEEeccccchh--hHHHHHHHhhhcCcEEEe-echhHHHHHh
Q 009511 460 PKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVAT-ICKDDYEKLK 504 (533)
Q Consensus 460 p~~~~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~-~~~~~~~~~~ 504 (533)
.+.-+.|+|.|.+..+| ++.|||..+|++|.+|.. ...|-.+.|+
T Consensus 103 ~~~~~nlll~Gp~GtGKTHLa~Aia~~a~~~g~~v~f~~~~~L~~~l~ 150 (269)
T PRK08181 103 LAKGANLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQ 150 (269)
T ss_pred HhcCceEEEEecCCCcHHHHHHHHHHHHHHcCCceeeeeHHHHHHHHH
Confidence 34456799999987788 999999999999999987 3344444443
No 336
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=58.87 E-value=17 Score=33.87 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=31.5
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
|-..|+. -.|.|+|..|.++|.+|.| .++|..+.|+++
T Consensus 2 I~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~ 41 (157)
T PF01210_consen 2 IAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINET 41 (157)
T ss_dssp EEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHH
T ss_pred EEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 5667777 5799999999999999999 566777888765
No 337
>PLN02427 UDP-apiose/xylose synthase
Probab=58.81 E-value=12 Score=39.34 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=29.3
Q ss_pred CcCcceEEEeccccchhhHHHHHHHhhhc-CcEEEeec
Q 009511 460 PKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATIC 496 (533)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~aia~~lc~~-~~~v~~~~ 496 (533)
|-..+.|++||++ +=||+.++..|.++ |.+|..++
T Consensus 11 ~~~~~~VlVTGgt--GfIGs~lv~~L~~~~g~~V~~l~ 46 (386)
T PLN02427 11 PIKPLTICMIGAG--GFIGSHLCEKLMTETPHKVLALD 46 (386)
T ss_pred cccCcEEEEECCc--chHHHHHHHHHHhcCCCEEEEEe
Confidence 4455679999999 68999999999998 58888743
No 338
>PRK07578 short chain dehydrogenase; Provisional
Probab=58.79 E-value=10 Score=35.78 Aligned_cols=27 Identities=26% Similarity=0.407 Sum_probs=24.3
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.|++||++ +-+|+++|..|+++ .+|+.
T Consensus 2 ~vlItGas--~giG~~la~~l~~~-~~vi~ 28 (199)
T PRK07578 2 KILVIGAS--GTIGRAVVAELSKR-HEVIT 28 (199)
T ss_pred eEEEEcCC--cHHHHHHHHHHHhc-CcEEE
Confidence 58999999 69999999999988 88876
No 339
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=58.74 E-value=13 Score=37.74 Aligned_cols=66 Identities=15% Similarity=0.198 Sum_probs=42.6
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHH-----------HHhcc--CChhhc----ccceeccccccc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE-----------KLKLR--IPVEAQ----HNLVLSTSYAAH 524 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~-----------~~~~~--~~~~~~----~~l~~~~~~~~~ 524 (533)
+.|-+.|+. .+|.+||..|.++|.+|.+ .+.++-+ ++.++ ...+.. .++.-++.+++.
T Consensus 4 ~kI~VIG~G---~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 80 (282)
T PRK05808 4 QKIGVIGAG---TMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLDDL 80 (282)
T ss_pred cEEEEEccC---HHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHHHh
Confidence 467888998 9999999999999999998 4444433 22222 111111 123234477777
Q ss_pred CceeeEee
Q 009511 525 KTVTMVTI 532 (533)
Q Consensus 525 ~~~~~~~~ 532 (533)
+.|.+|-+
T Consensus 81 ~~aDlVi~ 88 (282)
T PRK05808 81 KDADLVIE 88 (282)
T ss_pred ccCCeeee
Confidence 88887753
No 340
>PRK08727 hypothetical protein; Validated
Probab=58.60 E-value=14 Score=36.81 Aligned_cols=37 Identities=22% Similarity=0.183 Sum_probs=30.5
Q ss_pred ceEEEeccccchh--hHHHHHHHhhhcCcEEEeechhHH
Q 009511 464 AHVLLRGTVTANK--VANAVASSLCQMGIKVATICKDDY 500 (533)
Q Consensus 464 ~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~~~~~ 500 (533)
+-+++.|.+..+| +.+|+|.++|++|.+|..++-+++
T Consensus 42 ~~l~l~G~~G~GKThL~~a~~~~~~~~~~~~~y~~~~~~ 80 (233)
T PRK08727 42 DWLYLSGPAGTGKTHLALALCAAAEQAGRSSAYLPLQAA 80 (233)
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEeHHHh
Confidence 4599999988788 899999999999999887454443
No 341
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=58.45 E-value=17 Score=36.94 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=37.4
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccCCh
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~~~ 509 (533)
..|+.||.. |-+|+++|..+.+-|=+|++ =++++-+..+.+.|.
T Consensus 6 nTiLITGG~--sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~ 51 (245)
T COG3967 6 NTILITGGA--SGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE 51 (245)
T ss_pred cEEEEeCCc--chhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence 357999999 69999999999999999999 667777777777664
No 342
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=58.22 E-value=18 Score=37.47 Aligned_cols=38 Identities=16% Similarity=0.080 Sum_probs=30.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHh
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~ 504 (533)
+.|.+.|+. -+|.++|..|+++|.+|.+ .+++..++.+
T Consensus 3 ~~V~VIG~G---~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 3 GSVAIIGAG---LIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred cEEEEECcc---HHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 458889966 8999999999999999999 4455555543
No 343
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=58.18 E-value=11 Score=41.06 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=27.0
Q ss_pred cceEEEeccc--------------cchhhHHHHHHHhhhcCcEEEee
Q 009511 463 TAHVLLRGTV--------------TANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 463 ~~~v~l~g~~--------------~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
-+.|+.||.. |-+|+|++||.+|.++|.+|..+
T Consensus 185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~ 231 (390)
T TIGR00521 185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLI 231 (390)
T ss_pred CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEe
Confidence 4678888773 22599999999999999999883
No 344
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=58.18 E-value=8.4 Score=43.41 Aligned_cols=87 Identities=10% Similarity=0.019 Sum_probs=47.5
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhh-cCcEEEe-echhHHHHHhccCChhhc-ccc
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT-ICKDDYEKLKLRIPVEAQ-HNL 515 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~-~~~~v~~-~~~~~~~~~~~~~~~~~~-~~l 515 (533)
+=-+.+|.|..=.+...|-+- ++++-|++||.+ .+|+.|+.+.++ ...+|.+ +.-...--+-+.+..|.. +.+
T Consensus 252 ~gvv~vv~g~~~~~~~~L~~~-~~vd~V~FTGS~---~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i 327 (538)
T PLN02466 252 PGVLNVVSGFGPTAGAALASH-MDVDKLAFTGST---DTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELA 327 (538)
T ss_pred cccEEEEecCchhHHHHHhcC-CCcCEEEEECCH---HHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHH
Confidence 444666776432222222222 358889999999 999999998775 6678877 111111001111222222 233
Q ss_pred eecccccccCceee
Q 009511 516 VLSTSYAAHKTVTM 529 (533)
Q Consensus 516 ~~~~~~~~~~~~~~ 529 (533)
+...-+.+||.|.-
T Consensus 328 ~~~~f~~~GQ~C~a 341 (538)
T PLN02466 328 HFALFFNQGQCCCA 341 (538)
T ss_pred HHHHHhhcCCCcCc
Confidence 33334568898864
No 345
>PRK07952 DNA replication protein DnaC; Validated
Probab=58.18 E-value=21 Score=36.34 Aligned_cols=50 Identities=24% Similarity=0.270 Sum_probs=36.5
Q ss_pred hhcCCcCcceEEEeccccchh--hHHHHHHHhhhcCcEEEeech-hHHHHHhc
Q 009511 456 VNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVATICK-DDYEKLKL 505 (533)
Q Consensus 456 ~~~ip~~~~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~~-~~~~~~~~ 505 (533)
.++..++..-++|.|.+..+| ++.|||.+|+++|.+|+.++- |-.+.++.
T Consensus 92 ~~~~~~~~~~~~l~G~~GtGKThLa~aia~~l~~~g~~v~~it~~~l~~~l~~ 144 (244)
T PRK07952 92 VEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKD 144 (244)
T ss_pred HHhhccCCceEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEHHHHHHHHHH
Confidence 344455556789999877678 899999999999999988433 43444443
No 346
>KOG3011 consensus Ubiquitin-conjugating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=58.14 E-value=9.8 Score=39.11 Aligned_cols=136 Identities=16% Similarity=0.321 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhch------hh---hhhccccCCccCccCCcchhhccchhhHHHHHHH----HHHHHH
Q 009511 128 VILTILVHMGPVEFLYYWFHRALHH------HY---LYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL----FAIPLV 194 (533)
Q Consensus 128 ~i~~lll~~lv~Df~~Yw~HRllH~------~~---LY~r~HkvHHss~~p~~~ta~~~hplE~ll~~~l----~~iPll 194 (533)
.+++..+..+..||..=.+|++.-+ |. -+-| =+-||.. |++-.+..++|.+..... +..|+-
T Consensus 109 ~~La~~aG~i~AD~~SGl~HWaaD~~Gsv~tP~vG~~f~r-freHH~d----P~tITr~~f~~~~~ll~~a~~f~v~~~d 183 (293)
T KOG3011|consen 109 PALAAYAGYITADLGSGVYHWAADNYGSVSTPWVGRQFER-FQEHHKD----PWTITRRQFANNLHLLARAYTFIVLPLD 183 (293)
T ss_pred HHHHHHHHHHHHhhhcceeEeeccccCccccchhHHHHHH-HHhccCC----cceeeHHHHhhhhHHHHHhheeEecCHH
Confidence 4666667778899999999998653 11 2344 5678864 566667777776432211 112221
Q ss_pred HHH--HhhhhHHHHHHHHHHHHHHHhhcccccceeccccchhccCCcccccCCchhhhHhhhc-CCCCccCccchhhhhc
Q 009511 195 TTM--VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIY 271 (533)
Q Consensus 195 ~~~--llg~~s~~~~~~yli~~~~~~~~~Hsg~e~~P~~~~~~lp~Lk~li~Tp~~H~lHH~~-~~~NYG~~f~~WDrLF 271 (533)
.+. ....+-+.++..++.+..-.+-+.|.=..+ |.+..-. -- -.++....+|..||.. .++|||....+|.+.-
T Consensus 184 ~~~q~~~~h~fV~~~~i~v~~tnQiHkWsHTy~gL-P~wVv~L-Qd-~hlilpRkhH~iHH~aPh~~yyCI~tGw~N~~L 260 (293)
T KOG3011|consen 184 LAFQDPVFHGFVFLFAICVLFTNQIHKWSHTYSGL-PPWVVLL-QD-MHLILPRKHHRIHHVAPHNTYYCIVSGWWNWVL 260 (293)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHHHHHHHhhhccC-chHHHHH-hh-cceecccccccccccCccccceEEeechhhchH
Confidence 110 000011222233444445556678854444 5442111 00 1245578899999998 6899999999998753
No 347
>PRK08291 ectoine utilization protein EutC; Validated
Probab=58.08 E-value=36 Score=35.77 Aligned_cols=97 Identities=19% Similarity=0.126 Sum_probs=57.4
Q ss_pred HhcCCeEEEeccccccccccc-ccceeeccCCCCceeE-E-eeCCcchh-----hhhhhc--C-CcCcceEEEeccccch
Q 009511 407 DAKGVKVISLGLLNQGEELNR-NGEIYLERQPNKLKIK-V-VDGSSLAA-----AVVVNS--L-PKTTAHVLLRGTVTAN 475 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln~-~g~l~~~~~p~~l~vr-v-v~g~~l~a-----a~v~~~--i-p~~~~~v~l~g~~~~~ 475 (533)
+..|+|+++----|....|-. .|.+.+. .|..=.+. + .||+.||+ +..+.. + +++.+.|.+.|+.
T Consensus 66 ~~~g~K~~~~~~~N~~~glp~~~g~i~l~-d~~tG~~~ai~~d~~~lt~~rT~a~~~~a~~~la~~~~~~v~IiGaG--- 141 (330)
T PRK08291 66 DSFAIKVSPGFFDNPKLGLPSLNGLMVVL-SARTGLVEALLLDNGYLTDVRTAAAGAVAARHLAREDASRAAVIGAG--- 141 (330)
T ss_pred CeeEEEeccCCCCccccCCCcceEEEEEE-eCCCCceEEEEcCCchHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC---
Confidence 347888887544454433333 2344443 34122233 2 48988874 111111 2 6788899999998
Q ss_pred hhHHHHHHHhhh-cCcE-EEe--echhHHHHHhccC
Q 009511 476 KVANAVASSLCQ-MGIK-VAT--ICKDDYEKLKLRI 507 (533)
Q Consensus 476 k~~~aia~~lc~-~~~~-v~~--~~~~~~~~~~~~~ 507 (533)
..|++++.+|++ +|++ |.+ -++|+-+++.++.
T Consensus 142 ~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~ 177 (330)
T PRK08291 142 EQARLQLEALTLVRPIREVRVWARDAAKAEAYAADL 177 (330)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 889999999994 6654 544 4555666665543
No 348
>cd03510 Rhizobitoxine-FADS-like This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins. Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.
Probab=58.05 E-value=33 Score=32.92 Aligned_cols=14 Identities=36% Similarity=0.567 Sum_probs=11.1
Q ss_pred hhhccccCCccCcc
Q 009511 155 LYSRYHSHHHSSVV 168 (533)
Q Consensus 155 LY~r~HkvHHss~~ 168 (533)
.|+..|-.||....
T Consensus 72 ~~r~~H~~HH~~~~ 85 (175)
T cd03510 72 AYRRSHLKHHRHLG 85 (175)
T ss_pred HHHHHHHHHhCccC
Confidence 57788999999864
No 349
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=57.92 E-value=8.8 Score=41.89 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=39.0
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhh-cccceecccccccCceee
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~ 529 (533)
++++-|.+||.+ ++|+.|+....+.+.+|++ +.-...-=+-+.+.-|. .+.++.+.-+.+||.|.-
T Consensus 193 ~~v~~v~fTGs~---~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a 260 (457)
T cd07090 193 PDVAKVSFTGSV---PTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSN 260 (457)
T ss_pred CCCCEEEEECcH---HHHHHHHHHHhccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 367889999998 8899999988788888877 11111111111122221 223334444568888853
No 350
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=57.55 E-value=8.8 Score=42.27 Aligned_cols=66 Identities=9% Similarity=0.057 Sum_probs=39.3
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhhc-ccceecccccccCceee
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQ-HNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~ 529 (533)
++++-|++||.+ ++|+.|+....++-.++.+ +.-..---+-+.+.-|.. +.++...-+.+||.|.-
T Consensus 213 ~~vd~V~fTGs~---~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a 280 (474)
T cd07130 213 PRVPLVSFTGST---AVGRQVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTT 280 (474)
T ss_pred CCCCEEEEECch---HHHHHHHHHHHhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcC
Confidence 368889999999 9999999988777777766 110000000011222222 33444555668898874
No 351
>cd03505 Delta9-FADS-like The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide range of bacteria. These enzymes play essential roles in fatty acid metabolism and the regulation of cell membrane fluidity. Acyl-CoA desaturases are the enzymes involved in the CoA-bound desaturation of fatty acids. Mammalian stearoyl-CoA delta-9 desaturase is a key enzyme in the biosynthesis of monounsaturated fatty acids, and in yeast, the delta-9 acyl-CoA desaturase (OLE1) reaction accounts for all de nova unsaturated fatty acid production in Saccharomyces cerevisiae. These non-heme, iron-containing, ER membrane-bound enzymes are part of a three-component enzyme system involving cytochrome b5, cytochrome b5 reductase, and the delta-9 fatty acid desaturase. This complex catalyzes the NADH- and oxygen-dependent i
Probab=57.53 E-value=35 Score=33.34 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=17.2
Q ss_pred CCcccccCCchhhhHhhhc-CCCCccC
Q 009511 237 PPLKFLMYTPSYHSLHHTQ-FRTNYSL 262 (533)
Q Consensus 237 p~Lk~li~Tp~~H~lHH~~-~~~NYG~ 262 (533)
+++..+..+-.+|..||.. .+.+.|.
T Consensus 127 ~~~~llt~GEg~HNnHHafP~~ar~g~ 153 (178)
T cd03505 127 WWVALLTFGEGWHNNHHAFPGDARNGL 153 (178)
T ss_pred HHHHHHHccccccccccCCcchhhhCC
Confidence 3344444567899999997 4566663
No 352
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=57.44 E-value=11 Score=38.68 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=27.8
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEeechh
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATICKD 498 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~ 498 (533)
.|+++|++ +=||++++.+|.++|+.|.-+++.
T Consensus 2 riLI~Gas--G~lG~~l~~~l~~~~~~v~~~~r~ 33 (286)
T PF04321_consen 2 RILITGAS--GFLGSALARALKERGYEVIATSRS 33 (286)
T ss_dssp EEEEETTT--SHHHHHHHHHHTTTSEEEEEESTT
T ss_pred EEEEECCC--CHHHHHHHHHHhhCCCEEEEeCch
Confidence 58999999 699999999999999998885433
No 353
>PRK08324 short chain dehydrogenase; Validated
Probab=57.32 E-value=14 Score=42.66 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=31.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
|-|++||++ +-+|+++|..|.++|.+|+++ +.++-+++.+
T Consensus 423 k~vLVTGas--ggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~ 464 (681)
T PRK08324 423 KVALVTGAA--GGIGKATAKRLAAEGACVVLADLDEEAAEAAAA 464 (681)
T ss_pred CEEEEecCC--CHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH
Confidence 679999999 699999999999999999883 3344444433
No 354
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=57.26 E-value=18 Score=39.27 Aligned_cols=47 Identities=21% Similarity=0.351 Sum_probs=35.7
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+|.|+.-++..+++. .++-|.+||++ ++|++|+....++..+|.+
T Consensus 179 ~~vv~g~~~~~~~l~~~---~vd~V~ftGs~---~~g~~i~~~aa~~~~~~~l 225 (453)
T cd07099 179 LQVVTGDGATGAALIDA---GVDKVAFTGSV---ATGRKVMAAAAERLIPVVL 225 (453)
T ss_pred EEEEeCCchHHHHHhcC---CCCEEEEECCH---HHHHHHHHHHHhcCCeEEE
Confidence 55666655444445542 48899999998 8999999998888888887
No 355
>PRK06835 DNA replication protein DnaC; Validated
Probab=57.13 E-value=16 Score=38.77 Aligned_cols=43 Identities=23% Similarity=0.325 Sum_probs=34.1
Q ss_pred cceEEEeccccchh--hHHHHHHHhhhcCcEEEe-echhHHHHHhc
Q 009511 463 TAHVLLRGTVTANK--VANAVASSLCQMGIKVAT-ICKDDYEKLKL 505 (533)
Q Consensus 463 ~~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~-~~~~~~~~~~~ 505 (533)
-+-++|.|.+..+| ++.|||..|+++|.+|+. ...+-++.++.
T Consensus 183 ~~~Lll~G~~GtGKThLa~aIa~~l~~~g~~V~y~t~~~l~~~l~~ 228 (329)
T PRK06835 183 NENLLFYGNTGTGKTFLSNCIAKELLDRGKSVIYRTADELIEILRE 228 (329)
T ss_pred CCcEEEECCCCCcHHHHHHHHHHHHHHCCCeEEEEEHHHHHHHHHH
Confidence 36789999887778 899999999999999988 44455555654
No 356
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=57.10 E-value=16 Score=35.77 Aligned_cols=39 Identities=15% Similarity=0.173 Sum_probs=28.8
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhc
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~ 505 (533)
.|-+.|.+ ..+|.++|..|+++|.+|.+ -+.|+.+.+.+
T Consensus 2 kI~IIGG~--G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~ 42 (219)
T TIGR01915 2 KIAVLGGT--GDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA 42 (219)
T ss_pred EEEEEcCC--CHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence 36677754 48999999999999999988 34455555543
No 357
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=56.87 E-value=14 Score=42.45 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=38.4
Q ss_pred cCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 458 ~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
++++..+.|.+.|.. ++|+.+|..|.++|++|++ .++|+-++++++
T Consensus 395 ~~~~~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~ 442 (621)
T PRK03562 395 EIDEQQPRVIIAGFG---RFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF 442 (621)
T ss_pred ccccccCcEEEEecC---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc
Confidence 444556899999998 9999999999999999988 677788877653
No 358
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=56.72 E-value=8.9 Score=42.36 Aligned_cols=65 Identities=12% Similarity=0.117 Sum_probs=37.1
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhc-CcEEEe-echhHHHHHhccCChh-hcccceecccccccCceee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~-~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 529 (533)
+++-|.+||++ ++|+.|+.+.+++ ..+|.+ +.-..--=+-+.+.-| ..+.++...-+.+||.|.-
T Consensus 210 ~vd~V~fTGS~---~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a 277 (484)
T TIGR03240 210 DIDGLLFTGSS---NTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTC 277 (484)
T ss_pred CCCEEEEECCH---HHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcC
Confidence 78889999999 8999999988765 455655 1100000000112222 2233334444678888864
No 359
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=56.59 E-value=11 Score=41.35 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=26.8
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
++++-|.+||.+ ++|+.|+....++..+|.+
T Consensus 197 ~~v~~v~ftGs~---~~g~~i~~~aa~~~~~~~l 227 (454)
T cd07118 197 PDVDMVSFTGST---RVGKAIAAAAARNLKKVSL 227 (454)
T ss_pred CCCCEEEEECcH---HHHHHHHHHHHhcCCcEEe
Confidence 378889999988 8999999988888888877
No 360
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=56.49 E-value=11 Score=40.54 Aligned_cols=87 Identities=13% Similarity=0.048 Sum_probs=48.9
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCCh-hhcccce
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV-EAQHNLV 516 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~-~~~~~l~ 516 (533)
+=-+.+|.|+.-.++--|-+-| +++-|.+||++ ++|+.|+...+++..+|.+ +.-...--+-+.+.. ...+.++
T Consensus 156 ~gvv~~v~g~~~~~~~~L~~~~-~i~~V~ftGs~---~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~ 231 (431)
T cd07104 156 KGVLNVVPGGGSEIGDALVEHP-RVRMISFTGST---AVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAA 231 (431)
T ss_pred cccEEEeeCCchhHHHHHhcCC-CCCEEEEECCH---HHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHH
Confidence 4445566665432222222222 78889999998 8999999988888778777 111111001111222 2233444
Q ss_pred ecccccccCceee
Q 009511 517 LSTSYAAHKTVTM 529 (533)
Q Consensus 517 ~~~~~~~~~~~~~ 529 (533)
.+.-..+||.|.-
T Consensus 232 ~~~~~~~GQ~C~a 244 (431)
T cd07104 232 FGAFLHQGQICMA 244 (431)
T ss_pred HHHHhcCCCCccc
Confidence 5555668898864
No 361
>PRK05642 DNA replication initiation factor; Validated
Probab=56.40 E-value=16 Score=36.49 Aligned_cols=38 Identities=13% Similarity=0.102 Sum_probs=31.6
Q ss_pred ceEEEeccccchh--hHHHHHHHhhhcCcEEEeechhHHH
Q 009511 464 AHVLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYE 501 (533)
Q Consensus 464 ~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~~~~~~ 501 (533)
..++|.|....+| +.+|+|.+++++|.+|+.++.+++.
T Consensus 46 ~~l~l~G~~G~GKTHLl~a~~~~~~~~~~~v~y~~~~~~~ 85 (234)
T PRK05642 46 SLIYLWGKDGVGRSHLLQAACLRFEQRGEPAVYLPLAELL 85 (234)
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEeeHHHHH
Confidence 4689999886678 8999999999999999887777654
No 362
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=56.30 E-value=13 Score=39.36 Aligned_cols=44 Identities=32% Similarity=0.385 Sum_probs=33.0
Q ss_pred cchhhhhhhcCCc---CcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 449 SLAAAVVVNSLPK---TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 449 ~l~aa~v~~~ip~---~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|||||.- -.+|. ...+|...|+. =.|-+.|.+|.|+|++|+++.
T Consensus 2 ~~~~~~~-~~~~~~~~~~~dV~IvGaG---~aGl~~A~~L~~~G~~v~v~E 48 (415)
T PRK07364 2 TLTAATS-PTLPSTRSLTYDVAIVGGG---IVGLTLAAALKDSGLRIALIE 48 (415)
T ss_pred cccccCC-CCCCCCCccccCEEEECcC---HHHHHHHHHHhcCCCEEEEEe
Confidence 5666542 22332 34579999998 789999999999999999943
No 363
>PF01661 Macro: Macro domain; InterPro: IPR002589 The Macro or A1pp domain is a module of about 180 amino acids which can bind ADP-ribose, an NAD metabolite or related ligands. Binding to ADP-ribose could be either covalent or non-covalent []: in certain cases it is believed to bind non-covalently []; while in other cases (such as Aprataxin) it appears to bind both non-covalently through a zinc finger motif, and covalently through a separate region of the protein []. The domain was described originally in association with ADP-ribose 1''-phosphate (Appr-1''-P) processing activity (A1pp) of the yeast YBR022W protein []. The domain is also called Macro domain as it is the C-terminal domain of mammalian core histone macro-H2A [, ]. Macro domain proteins can be found in eukaryotes, in (mostly pathogenic) bacteria, in archaea and in ssRNA viruses, such as coronaviruses, Rubella and Hepatitis E viruses. In vertebrates the domain occurs e.g. in histone macroH2A, in predicted poly-ADP-ribose polymerases (PARPs) and in B aggressive lymphoma (BAL) protein. The macro domain can be associated with catalytic domains, such as PARP, or sirtuin. The Macro domain can recognise ADP-ribose or in some cases poly-ADP-ribose, which can be involved in ADP-ribosylation reactions that occur in important processes, such as chromatin biology, DNA repair and transcription regulation []. The human macroH2A1.1 Macro domain binds an NAD metabolite O-acetyl-ADP-ribose []. The Macro domain has been suggested to play a regulatory role in ADP-ribosylation, which is involved in inter- and intracellular signaling, transcriptional regulation, DNA repair pathways and maintenance of genomic stability, telomere dynamics, cell differentiation and proliferation, and necrosis and apoptosis. The 3D structure of the Macro domain has a mixed alpha/beta fold of a mixed beta sheet sandwiched between four helices. Several Macro domain only domains are shorter than the structure of AF1521 and lack either the first strand or the C-terminal helix 5. Well conserved residues form a hydrophobic cleft and cluster around the AF1521-ADP-ribose binding site [, , , ]. ; PDB: 2DX6_A 2XD7_D 3Q71_A 2FAV_B 1SPV_A 3EKE_A 3EJF_A 1YD9_B 3GPG_B 3GPQ_A ....
Probab=56.17 E-value=49 Score=28.41 Aligned_cols=62 Identities=23% Similarity=0.276 Sum_probs=45.1
Q ss_pred cceeEeeccccCcccceeEEeeccCceeccchhhhHhHHHHHHHHHHHHhcCCeEEEeccccc
Q 009511 359 GRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQ 421 (533)
Q Consensus 359 ~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~ie~ai~~a~~~g~kv~slg~ln~ 421 (533)
|...+.+.+.+.-...=..+.|+|.-+ .-+.+.+.+.+-+++++..|+++++|.|.+=++.-
T Consensus 43 G~~~~t~~~~l~~~~Iih~v~P~~~~~-~~~~~~~~L~~~~~~~l~~a~~~~~~sIa~P~ig~ 104 (118)
T PF01661_consen 43 GEVIVTPGGNLPCKYIIHAVGPTYNSP-GEKNSYEALESAYRNALQKAEENGIKSIAFPAIGT 104 (118)
T ss_dssp TSEEEEEETTSSSSEEEEEEEEETTTS-TSTTHHHHHHHHHHHHHHHHHHTTTSEEEEESTTS
T ss_pred CCeeeecCCCccccceEEEecceeccc-cccccHHHHHHHHHHHHHHHHHcCCcccccCcccC
Confidence 456666666665222233355887654 55678889999999999999999999999877653
No 364
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=56.07 E-value=9.9 Score=41.98 Aligned_cols=31 Identities=13% Similarity=0.132 Sum_probs=26.8
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
++++-|++||++ ++|+.|+....++..+|.+
T Consensus 214 ~~v~~V~fTGS~---~~G~~i~~~aa~~~~~~~l 244 (472)
T TIGR03374 214 EKVRMVSLTGSI---ATGEHILSHTAPSIKRTHM 244 (472)
T ss_pred CCcCEEEEECCH---HHHHHHHHHHhhcccceEE
Confidence 468899999999 9999999988887778876
No 365
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=55.93 E-value=11 Score=41.13 Aligned_cols=67 Identities=16% Similarity=0.117 Sum_probs=40.8
Q ss_pred CcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhh-cccceecccccccCceee
Q 009511 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~ 529 (533)
.++++-|++||++ ++|+.|+.+..+++.+|++ +.-..--=+-+.+.-|. -+.++.+.-..+||.|.-
T Consensus 194 ~~~v~~v~ftGs~---~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a 262 (454)
T cd07109 194 HPGVDHISFTGSV---ETGIAVMRAAAENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSA 262 (454)
T ss_pred CCCCCEEEEECCH---HHHHHHHHHHhhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcc
Confidence 4478889999988 9999999998888999877 11111000001122222 233334444568888863
No 366
>PRK11440 putative hydrolase; Provisional
Probab=55.84 E-value=93 Score=29.66 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=29.0
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.|+++++++|-.+ +=-=.+.|..+.++|++|.+
T Consensus 119 ~gi~~lii~Gv~T-~~CV~~Ta~~A~~~gy~v~v 151 (188)
T PRK11440 119 RGIDTIVLCGIST-NIGVESTARNAWELGFNLVI 151 (188)
T ss_pred CCCCEEEEeeech-hHHHHHHHHHHHHCCCEEEE
Confidence 4889999999997 55568888999999999999
No 367
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=55.74 E-value=9.4 Score=42.00 Aligned_cols=66 Identities=15% Similarity=0.085 Sum_probs=39.5
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceecccccccCceeeE
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLSTSYAAHKTVTMV 530 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~ 530 (533)
+++-|.+||++ ++|++|+....+++.+|.+ +.-...-=+-+.+..| ..+.++.+.-+.+||.|.-.
T Consensus 214 ~v~~V~fTGs~---~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~ 281 (478)
T cd07085 214 DIKAVSFVGST---PVGEYIYERAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMAL 281 (478)
T ss_pred CcCEEEEECCH---HHHHHHHHHHhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 68889999999 8999999887788888877 1111110011112222 22333344445688988743
No 368
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=55.17 E-value=19 Score=37.06 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=32.2
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCc-EEEeec--hhHHHHHhcc
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVATIC--KDDYEKLKLR 506 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~-~v~~~~--~~~~~~~~~~ 506 (533)
.-+.|++.|+. -.|||||.+|.+.|+ +|.+.+ .|+-++|.++
T Consensus 124 ~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~ 168 (282)
T TIGR01809 124 AGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDL 168 (282)
T ss_pred CCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH
Confidence 34689999998 789999999999998 476633 3666666543
No 369
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=55.15 E-value=13 Score=40.40 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=48.2
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCC-hhhcccceecc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP-VEAQHNLVLST 519 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~-~~~~~~l~~~~ 519 (533)
+-+|+|+.-+.+.++.. | ++-|.+||++ +.|++|+....+++.++++ ..-...--+-+.+. +...+.++.+.
T Consensus 159 ~~vv~g~~~~~~~l~~~-~--v~~V~ftGs~---~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~ 232 (426)
T cd07087 159 VAVVEGGVEVATALLAE-P--FDHIFFTGSP---AVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGK 232 (426)
T ss_pred EEEEeCCchHHHHHHhC-C--CCEEEEeCCh---HHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHH
Confidence 45677655444445544 4 8999999999 8999999987777777766 11111111111121 22223444455
Q ss_pred cccccCceee
Q 009511 520 SYAAHKTVTM 529 (533)
Q Consensus 520 ~~~~~~~~~~ 529 (533)
-+.+||.|.-
T Consensus 233 ~~~~GQ~C~a 242 (426)
T cd07087 233 FLNAGQTCIA 242 (426)
T ss_pred HhccCCcccc
Confidence 5668888863
No 370
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=55.14 E-value=10 Score=41.18 Aligned_cols=83 Identities=12% Similarity=0.172 Sum_probs=46.2
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceecc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLST 519 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~~ 519 (533)
+.+|+|+.-++..++ + -++++-|++||++ ++|+.|+....++..++.+ +.-...-=+-+.+..+ ..+.++.+.
T Consensus 173 ~~~v~g~~~~~~~l~-~-~~~vd~V~fTGs~---~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~ 247 (446)
T cd07106 173 LNVVSGGDELGPALT-S-HPDIRKISFTGST---ATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGA 247 (446)
T ss_pred EEEeeCChhHHHHHh-c-CCCCCEEEEECCH---HHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHH
Confidence 556666432222221 1 2378899999999 9999999988788778876 1111110011112222 223344444
Q ss_pred cccccCceee
Q 009511 520 SYAAHKTVTM 529 (533)
Q Consensus 520 ~~~~~~~~~~ 529 (533)
-+.+||.|.-
T Consensus 248 ~~~~GQ~C~a 257 (446)
T cd07106 248 FINSGQVCAA 257 (446)
T ss_pred HHhcCCCCCC
Confidence 4568888863
No 371
>PLN02203 aldehyde dehydrogenase
Probab=54.88 E-value=19 Score=40.19 Aligned_cols=48 Identities=15% Similarity=0.303 Sum_probs=38.4
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.+|+|..-++..++.. | ++.|.+||++ .+|+.|+....++..+|.+
T Consensus 166 vv~vv~g~~~~~~~l~~~-~--vd~v~fTGS~---~~G~~v~~~aa~~l~~v~l 213 (484)
T PLN02203 166 AVKVIEGGPAVGEQLLQH-K--WDKIFFTGSP---RVGRIIMTAAAKHLTPVAL 213 (484)
T ss_pred EEEEEeCCHHHHHHHHhC-C--CCEEEEECCH---HHHHHHHHHHHhcCCCEEE
Confidence 366788765555556655 4 8889999999 8999999988888889888
No 372
>PF08032 SpoU_sub_bind: RNA 2'-O ribose methyltransferase substrate binding; InterPro: IPR013123 Most cellular RNAs undergo a number of post-transcriptional nucleoside modifications. While the biological role of many of these modifications is unknown, some have been shown to be necessary for cell growth or for resistance to antibiotics [, ]. One of the most common modifications is 2'O-ribose methylation catalysed by the RNA 2'O-ribose methyltransferases, a large enzyme family that transfer a methyl group from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of the backbone ribose []. This entry represents a substrate-binding domain found in a variety of bacterial and mitochondrial RNA 2'-O ribose methyltransferases. These include the bacterial enzyme RlmB, which specifically methylates the conserved nucleotide guanosine 2251 in 23S RNA, and PET56, which specifically methylates the equivalent guanosine in mitochondrial 21S RNA [, ]. This domain forms a four-stranded mixed beta sheet similar to that found in other RNA binding enzymes []. It shows considerable conformational flexibility which is thought to be important for its ability to bind RNA.; GO: 0008168 methyltransferase activity; PDB: 1GZ0_D 1IPA_A.
Probab=54.78 E-value=20 Score=28.85 Aligned_cols=69 Identities=14% Similarity=0.210 Sum_probs=43.4
Q ss_pred eCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEeechhHHHHHhccCChhhcccceecc
Q 009511 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST 519 (533)
Q Consensus 446 ~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~ 519 (533)
-|-.+.-+++-+. ++ .++||++-... ++-...+...+.++|++|..++++.+++|-.. ...|.-+..+.
T Consensus 3 eG~~~V~eaL~~~-~~-i~~l~~~~~~~-~~~~~~i~~~~~~~~i~v~~v~~~~l~~ls~~--~~hQGv~a~v~ 71 (76)
T PF08032_consen 3 EGRHAVEEALKSG-PR-IKKLFVTEEKA-DKRIKEILKLAKKKGIPVYEVSKKVLDKLSDT--ENHQGVVAVVK 71 (76)
T ss_dssp ESHHHHHHHHHCT-GG-EEEEEEETT----CCTHHHHHHHHHCT-EEEEE-HHHHHHCTTT--SS-TTEEEEEE
T ss_pred EEHHHHHHHHcCC-CC-ccEEEEEcCcc-chhHHHHHHHHHHcCCeEEEeCHHHHHHHcCC--CCCCeEEEEEe
Confidence 3444444555554 44 99999997732 45457888888899999999999999988763 34444444444
No 373
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=54.41 E-value=12 Score=41.18 Aligned_cols=31 Identities=16% Similarity=0.116 Sum_probs=26.1
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
++++.|.+||++ ++|+.|+.+..++..+|.+
T Consensus 209 ~~v~~v~fTGs~---~~g~~i~~~aa~~~~~~~l 239 (465)
T cd07151 209 PVPRLISFTGST---PVGRHIGELAGRHLKKVAL 239 (465)
T ss_pred CCCCEEEEECCH---HHHHHHHHHHHhcCCcEEE
Confidence 458889999998 8999999987777777766
No 374
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=54.29 E-value=12 Score=41.17 Aligned_cols=87 Identities=10% Similarity=-0.025 Sum_probs=47.9
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhh-cCcEEEe-echhHHHHHhccC-C-hhhccc
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT-ICKDDYEKLKLRI-P-VEAQHN 514 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~-~~~~v~~-~~~~~~~~~~~~~-~-~~~~~~ 514 (533)
.=-+.+|.|+.-.+...|.+- ++++-|.+||++ ++|+.|+.+..+ ...+|.+ +.-..---+-+.+ . +..-+.
T Consensus 181 ~g~v~~v~g~~~~~~~~l~~~-~~v~~V~fTGs~---~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~ 256 (462)
T cd07112 181 AGVLNVVPGFGHTAGEALGLH-MDVDALAFTGST---EVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEA 256 (462)
T ss_pred CCcEEEEeCCCchHHHHHhcC-CCcCEEEEECCH---HHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHH
Confidence 444667776543222223222 378899999998 899999998874 6677766 1100000000112 1 122233
Q ss_pred ceecccccccCceee
Q 009511 515 LVLSTSYAAHKTVTM 529 (533)
Q Consensus 515 l~~~~~~~~~~~~~~ 529 (533)
++...-..+||.|.-
T Consensus 257 i~~~~~~~~GQ~C~a 271 (462)
T cd07112 257 AAAGIFWNQGEVCSA 271 (462)
T ss_pred HHHHHHhccCCCCCC
Confidence 445555568898864
No 375
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=54.18 E-value=12 Score=40.52 Aligned_cols=68 Identities=9% Similarity=0.026 Sum_probs=42.8
Q ss_pred CcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCC-hhhcccceecccccccCceeeE
Q 009511 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP-VEAQHNLVLSTSYAAHKTVTMV 530 (533)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 530 (533)
.++++-|++||++ ++|++|+....+++.+|.+ +.-..--=+-+.+. +...+.++....+.+||.|.-.
T Consensus 178 ~~~v~~v~ftGs~---~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~ 247 (432)
T cd07105 178 HPAVRKVNFTGST---RVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMST 247 (432)
T ss_pred CCCCCEEEEECCH---HHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCC
Confidence 3478899999998 8999999998888888877 11111000001122 2222345556667799999743
No 376
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=54.07 E-value=11 Score=41.30 Aligned_cols=87 Identities=14% Similarity=0.061 Sum_probs=47.9
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCC-hhhcccce
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP-VEAQHNLV 516 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~-~~~~~~l~ 516 (533)
+=-+.+|+|+.-.+.-.|-+ -++++.|.+||++ ++|+.|+....++..+|.+ +.-..---+-+.+. +...+.++
T Consensus 180 ~g~~~~v~g~~~~~~~~l~~-~~~~~~v~ftGs~---~~g~~v~~~aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~ 255 (459)
T cd07089 180 AGVVNVVTGSDNAVGEALTT-DPRVDMVSFTGST---AVGRRIMAQAAATLKRVLLELGGKSANIVLDDADLAAAAPAAV 255 (459)
T ss_pred ccceEEEecCcHHHHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHH
Confidence 33366676643221111111 2378889999998 8999999987777778776 11000000001122 12234445
Q ss_pred ecccccccCceee
Q 009511 517 LSTSYAAHKTVTM 529 (533)
Q Consensus 517 ~~~~~~~~~~~~~ 529 (533)
++.-+.+||.|.-
T Consensus 256 ~~~~~~sGQ~C~a 268 (459)
T cd07089 256 GVCMHNAGQGCAL 268 (459)
T ss_pred HHHHHhcCCcccC
Confidence 5556678999863
No 377
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=54.06 E-value=11 Score=40.85 Aligned_cols=66 Identities=17% Similarity=0.043 Sum_probs=39.4
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceecccccccCceee
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 529 (533)
++++-|.+||++ ++|+.|+....++..+|.+ +.-..--=+-+.+.-| ..+.++...-+.+||.|.-
T Consensus 173 ~~i~~v~fTGs~---~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a 240 (429)
T cd07100 173 PRVRGVTLTGSE---RAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIA 240 (429)
T ss_pred CCCCEEEEECcH---HHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCC
Confidence 367889999998 8999999987788778766 1110000011112222 2234445555678888863
No 378
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=53.97 E-value=24 Score=38.52 Aligned_cols=50 Identities=16% Similarity=0.252 Sum_probs=35.9
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.+|.|+.-..+-.|-+-| +++-|++||.+ ++|+.|+....++..+|++
T Consensus 175 ~~~~v~g~~~~~~~~L~~~~-~vd~v~ftGs~---~~g~~v~~~aa~~l~~~~l 224 (457)
T cd07108 175 VLNVITGYGEECGAALVDHP-DVDKVTFTGST---EVGKIIYRAAADRLIPVSL 224 (457)
T ss_pred cEEEEeCCchHHHHHHhcCC-CcCEEEEECcH---HHHHHHHHHHhccCCeEEE
Confidence 36677775433333333333 78889999988 8999999988888888877
No 379
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=53.94 E-value=17 Score=37.47 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=30.8
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCc-EEEee--chhHHHHHhc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVATI--CKDDYEKLKL 505 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~-~v~~~--~~~~~~~~~~ 505 (533)
-+.|++.|+. -.|||+|.+|++.|+ +|.+. +.++=+++.+
T Consensus 127 ~k~vlIlGaG---Gaaraia~aL~~~G~~~I~I~nR~~~ka~~la~ 169 (284)
T PRK12549 127 LERVVQLGAG---GAGAAVAHALLTLGVERLTIFDVDPARAAALAD 169 (284)
T ss_pred CCEEEEECCc---HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 3789999998 689999999999998 67773 3345555543
No 380
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=53.94 E-value=11 Score=40.79 Aligned_cols=50 Identities=14% Similarity=0.214 Sum_probs=35.4
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.+|+|+.-..+-.+-+ -++++-|++||++ ++|+.|+....+++.++.+
T Consensus 176 ~v~~v~~~~~~~~~~l~~-~~~vd~V~ftGs~---~~g~~v~~~aa~~~~~~~l 225 (451)
T cd07103 176 VLNVVTGSPAEIGEALCA-SPRVRKISFTGST---AVGKLLMAQAADTVKRVSL 225 (451)
T ss_pred cEEEEecCchhHHHHHhc-CCCCCEEEEECCH---HHHHHHHHHHHhcCCcEEE
Confidence 367788754332222211 1378899999998 8999999988888888777
No 381
>cd03512 Alkane-hydroxylase Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases. The alk genes in Pseudomonas oleovorans encode conversion of alkanes to acyl CoA. The alkane omega-hydroxylase (AlkB) system is responsible for the initial oxidation of inactivated alkanes. It is a three-component system comprising a soluble NADH-rubredoxin reductase (AlkT), a soluble rubredoxin (AlkG), and the integral membrane oxygenase (AlkB). AlkB utilizes the oxygen rebound mechanism to hydroxylate alkanes. This mechanism involves homolytic cleavage of the C-H bond by an electrophilic metal-oxo intermediate to generate a substrate-based radical. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. The active
Probab=53.93 E-value=1.6e+02 Score=31.03 Aligned_cols=24 Identities=25% Similarity=0.402 Sum_probs=17.0
Q ss_pred cccccCCchhhhHhhhcCCCCccC
Q 009511 239 LKFLMYTPSYHSLHHTQFRTNYSL 262 (533)
Q Consensus 239 Lk~li~Tp~~H~lHH~~~~~NYG~ 262 (533)
.+++...-.+|.-||.+...-|-.
T Consensus 256 ~n~l~~nl~rHsdHH~~p~~~y~~ 279 (314)
T cd03512 256 SNLLLFNLQRHSDHHAHPTRPYQA 279 (314)
T ss_pred HHHHHHhcchhhhhccCCCCchhh
Confidence 344455667899999987776654
No 382
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=53.46 E-value=19 Score=38.12 Aligned_cols=68 Identities=10% Similarity=0.122 Sum_probs=45.0
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhc-----------c--CChhhcccceecccccc-c
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL-----------R--IPVEAQHNLVLSTSYAA-H 524 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~-----------~--~~~~~~~~l~~~~~~~~-~ 524 (533)
.+.+.|-+.|+. =+|+.||..+++.|++|.+ .+.+.-++.+. . .+.+...++-.++++.+ .
T Consensus 5 ~~i~~VaVIGaG---~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av 81 (321)
T PRK07066 5 TDIKTFAAIGSG---VIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACV 81 (321)
T ss_pred CCCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHh
Confidence 456789999998 6899999999999999999 44443333222 1 12333344445556754 4
Q ss_pred CceeeEe
Q 009511 525 KTVTMVT 531 (533)
Q Consensus 525 ~~~~~~~ 531 (533)
++|.+|.
T Consensus 82 ~~aDlVi 88 (321)
T PRK07066 82 ADADFIQ 88 (321)
T ss_pred cCCCEEE
Confidence 7887764
No 383
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=53.30 E-value=18 Score=42.31 Aligned_cols=70 Identities=16% Similarity=0.213 Sum_probs=48.5
Q ss_pred CCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc-------------CChhh-c---ccceecc
Q 009511 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-------------IPVEA-Q---HNLVLST 519 (533)
Q Consensus 459 ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~-------------~~~~~-~---~~l~~~~ 519 (533)
-|.+.+.|-..|+. =+|..||..+++.|++|.+ .+.|.-++.+++ +.++. + .++--++
T Consensus 309 ~~~~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 385 (714)
T TIGR02437 309 IAKDVKQAAVLGAG---IMGGGIAYQSASKGTPIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITPTL 385 (714)
T ss_pred CccccceEEEECCc---hHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeC
Confidence 35688999999999 6899999999999999999 555554432221 22222 2 2232445
Q ss_pred cccccCceeeEe
Q 009511 520 SYAAHKTVTMVT 531 (533)
Q Consensus 520 ~~~~~~~~~~~~ 531 (533)
.|++.++|.+|.
T Consensus 386 ~~~~~~~aDlVi 397 (714)
T TIGR02437 386 SYAGFDNVDIVV 397 (714)
T ss_pred CHHHhcCCCEEE
Confidence 888788888874
No 384
>PLN00015 protochlorophyllide reductase
Probab=52.77 E-value=15 Score=37.49 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=28.3
Q ss_pred EEeccccchhhHHHHHHHhhhcC-cEEEee--chhHHHHHhcc
Q 009511 467 LLRGTVTANKVANAVASSLCQMG-IKVATI--CKDDYEKLKLR 506 (533)
Q Consensus 467 ~l~g~~~~~k~~~aia~~lc~~~-~~v~~~--~~~~~~~~~~~ 506 (533)
++||++ +=+|+++|..|+++| .+|++. +.++-+.+..+
T Consensus 1 lITGas--~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~ 41 (308)
T PLN00015 1 IITGAS--SGLGLATAKALAETGKWHVVMACRDFLKAERAAKS 41 (308)
T ss_pred CEeCCC--ChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 479999 589999999999999 999883 33333444433
No 385
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=52.66 E-value=27 Score=35.51 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=28.9
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhc
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~ 505 (533)
.|-+.|.. .+|.++|.+|.++|.+|.. .+++.-++.++
T Consensus 2 ~I~IIG~G---~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~ 41 (279)
T PRK07417 2 KIGIVGLG---LIGGSLGLDLRSLGHTVYGVSRRESTCERAIE 41 (279)
T ss_pred eEEEEeec---HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 36677865 9999999999999999988 44455555543
No 386
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=52.51 E-value=26 Score=36.72 Aligned_cols=65 Identities=25% Similarity=0.381 Sum_probs=44.9
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCc--EEEe--echhHHHHHhcc----CChhhcccceecccccccCceeeEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLR----IPVEAQHNLVLSTSYAAHKTVTMVTI 532 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~--~v~~--~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~ 532 (533)
+.|-+.|+. +||.++|..|+.+|+ ++.+ .+++.-+-...+ +|... +.-+.++.|++-++|++|.|
T Consensus 7 ~ki~iiGaG---~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~-~~~i~~~~~~~~~~adivIi 79 (315)
T PRK00066 7 NKVVLVGDG---AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTS-PTKIYAGDYSDCKDADLVVI 79 (315)
T ss_pred CEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccC-CeEEEeCCHHHhCCCCEEEE
Confidence 588999985 999999999999999 5666 444544433332 33222 22334557999999999876
No 387
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=52.40 E-value=20 Score=33.86 Aligned_cols=41 Identities=24% Similarity=0.247 Sum_probs=34.3
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEeechhHHHHHhc
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKL 505 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~~~ 505 (533)
.-+.|++.|.. |+|...|..|.+.|.+|.++++|.-++++.
T Consensus 12 ~~~~vlVvGGG---~va~rka~~Ll~~ga~V~VIsp~~~~~l~~ 52 (157)
T PRK06719 12 HNKVVVIIGGG---KIAYRKASGLKDTGAFVTVVSPEICKEMKE 52 (157)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEcCccCHHHHh
Confidence 44689999998 999999999999999999977765555543
No 388
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=52.40 E-value=14 Score=39.47 Aligned_cols=42 Identities=24% Similarity=0.290 Sum_probs=34.7
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe---echhHHHHHhcc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR 506 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~---~~~~~~~~~~~~ 506 (533)
.+.|+.||+. .=+|...++.|.++|..|++ ++....+++++-
T Consensus 2 ~~~VLVtGga--GyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~ 46 (343)
T KOG1371|consen 2 GKHVLVTGGA--GYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRV 46 (343)
T ss_pred CcEEEEecCC--cceehHHHHHHHhCCCcEEEEecccccchhHHHHH
Confidence 4679999999 69999999999999999999 555556666653
No 389
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=52.04 E-value=11 Score=41.22 Aligned_cols=50 Identities=14% Similarity=0.273 Sum_probs=37.0
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+=-+-+|+|+.-+...++. + .++.|.+||.+ .+|+.|+....++..+|.+
T Consensus 157 ~gvv~~v~g~~~~~~~L~~--~-~i~~v~fTGs~---~~g~~v~~~aa~~~~~~~l 206 (432)
T cd07137 157 TKAIKVIEGGVPETTALLE--Q-KWDKIFFTGSP---RVGRIIMAAAAKHLTPVTL 206 (432)
T ss_pred cCeEEEEeCCHHHHHHHHh--C-CCCEEEEECCh---HHHHHHHHHHHhcCCcEEE
Confidence 3346788875434444444 3 47889999999 8999999987788888877
No 390
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=51.90 E-value=21 Score=33.96 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=32.3
Q ss_pred hhhhcC--CcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 454 VVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 454 ~v~~~i--p~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.+.+.+ +++-+=++|+|..+-.=-|-++|.+|+++|++|.+
T Consensus 15 ~i~~~~~~~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 15 LIRKLFGSPKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTV 57 (169)
T ss_dssp HHHHHSTCCTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhcccCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEE
Confidence 566677 77777889999885455788999999999999998
No 391
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=51.82 E-value=11 Score=41.73 Aligned_cols=84 Identities=7% Similarity=0.099 Sum_probs=46.5
Q ss_pred eEEeeCCc-chhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcC------cEEEe-echhHHHHHhccCChhh-c
Q 009511 442 IKVVDGSS-LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG------IKVAT-ICKDDYEKLKLRIPVEA-Q 512 (533)
Q Consensus 442 vrvv~g~~-l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~------~~v~~-~~~~~~~~~~~~~~~~~-~ 512 (533)
+.+|+|.. -+.+.++. .++++.|.+||++ ++|++|+....++. .+|++ +.-..---+-+.+.-|. -
T Consensus 214 v~~v~g~~~~~~~~L~~--~~~v~~v~ftGs~---~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa 288 (500)
T cd07083 214 VQFLPGVGEEVGAYLTE--HERIRGINFTGSL---ETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVV 288 (500)
T ss_pred eEEEeCCCchhHHHHhc--CCCcCEEEEECcH---HHHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHH
Confidence 56666632 22222222 4578889999999 99999999877653 67766 11110000111122222 2
Q ss_pred ccceecccccccCceeeE
Q 009511 513 HNLVLSTSYAAHKTVTMV 530 (533)
Q Consensus 513 ~~l~~~~~~~~~~~~~~~ 530 (533)
+.++++.-..+||.|.-.
T Consensus 289 ~~i~~~~f~~~GQ~C~a~ 306 (500)
T cd07083 289 EGVVVSAFGFQGQKCSAA 306 (500)
T ss_pred HHHHHHHHhhcCCCCCCC
Confidence 344455445689998753
No 392
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=51.69 E-value=16 Score=39.86 Aligned_cols=82 Identities=17% Similarity=0.178 Sum_probs=47.6
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceecc
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLST 519 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~~ 519 (533)
+.+|+|..=+.+.+.+ +. ++.|.+||++ .+|+.|+....++..+|.+ +.-...--+-+.+.-+ ..+.++...
T Consensus 160 ~~~v~g~~~~~~~l~~--~~-v~~V~ftGs~---~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~ 233 (434)
T cd07133 160 VAVVTGGADVAAAFSS--LP-FDHLLFTGST---AVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGK 233 (434)
T ss_pred EEEEeCChHHHHHHHh--CC-CCEEEEeCch---HHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 5677765323333443 23 8899999999 8999999987777788877 1111111111112222 223334444
Q ss_pred cccccCceee
Q 009511 520 SYAAHKTVTM 529 (533)
Q Consensus 520 ~~~~~~~~~~ 529 (533)
-+.+||.|.-
T Consensus 234 ~~~~GQ~C~a 243 (434)
T cd07133 234 LLNAGQTCVA 243 (434)
T ss_pred hccCCCcccC
Confidence 5678998863
No 393
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=51.55 E-value=12 Score=41.72 Aligned_cols=67 Identities=12% Similarity=0.051 Sum_probs=37.9
Q ss_pred cCcceEEEeccccchhhHHHHHHHhh------hcCcEEEe-echhHHHHHhccCChhh-cccceecccccccCceeeE
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLC------QMGIKVAT-ICKDDYEKLKLRIPVEA-QHNLVLSTSYAAHKTVTMV 530 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc------~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~ 530 (533)
++++-|.+||++ ++|++|+.... ++..+|.+ +.-..---+-+.+.-|. .+.++...-..+||.|.-.
T Consensus 245 ~~v~~V~fTGs~---~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~ 319 (511)
T TIGR01237 245 PKTHLITFTGSR---EVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSAC 319 (511)
T ss_pred CCCCeEEEECch---HHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccc
Confidence 378889999999 89999988755 35567766 11100000001122222 3334445455688998753
No 394
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=51.26 E-value=14 Score=37.27 Aligned_cols=27 Identities=15% Similarity=0.325 Sum_probs=24.0
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|++||++ +=||+.+|..|.++|.+|+.
T Consensus 2 ilVtGa~--GfiG~~l~~~L~~~g~~~v~ 28 (308)
T PRK11150 2 IIVTGGA--GFIGSNIVKALNDKGITDIL 28 (308)
T ss_pred EEEecCC--cHHHHHHHHHHHhCCCceEE
Confidence 7999999 68999999999999986554
No 395
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=51.12 E-value=14 Score=41.07 Aligned_cols=50 Identities=10% Similarity=0.141 Sum_probs=34.1
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhh------cCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ------MGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~------~~~~v~~ 494 (533)
-+.+|.|..-.++-.|-+-| +++-|.+||++ ++|++|+....+ +..+|.+
T Consensus 225 vv~vv~g~~~~~~~~L~~~~-~v~~V~fTGs~---~~g~~i~~~aa~~~~~~~~l~~~~l 280 (512)
T cd07124 225 VVNFLPGPGEEVGDYLVEHP-DVRFIAFTGSR---EVGLRIYERAAKVQPGQKWLKRVIA 280 (512)
T ss_pred ceEEeccCchHHHHHHhcCC-CCCEEEEeCch---HHHHHHHHHHhcccccccCCCcEEE
Confidence 35666665333222233323 78889999999 899999998876 4677777
No 396
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=50.94 E-value=16 Score=38.71 Aligned_cols=41 Identities=32% Similarity=0.367 Sum_probs=32.9
Q ss_pred cceEEEeccccchh--hHHHHHHHhhhcCcEEEeechhHHHHH
Q 009511 463 TAHVLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYEKL 503 (533)
Q Consensus 463 ~~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~~~~~~~~ 503 (533)
++=||++|+...+| ++.|+|.+|.+.|-||+++|.|-=.+|
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL 44 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSL 44 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCch
Confidence 34579999988888 999999999999988888777644433
No 397
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=50.72 E-value=21 Score=40.16 Aligned_cols=41 Identities=15% Similarity=0.098 Sum_probs=32.7
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEeec--hhHHHHHhcc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KDDYEKLKLR 506 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~--~~~~~~~~~~ 506 (533)
-|.|+++|+. -.|||||.+|.++|.+|.+.+ .++-+++.++
T Consensus 379 ~k~vlIlGaG---GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~ 421 (529)
T PLN02520 379 GKLFVVIGAG---GAGKALAYGAKEKGARVVIANRTYERAKELADA 421 (529)
T ss_pred CCEEEEECCc---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 4689999997 789999999999999998843 3556666544
No 398
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=50.59 E-value=14 Score=41.42 Aligned_cols=82 Identities=12% Similarity=0.090 Sum_probs=47.3
Q ss_pred eeEEeeCCcc-hhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hccccee
Q 009511 441 KIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVL 517 (533)
Q Consensus 441 ~vrvv~g~~l-~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~ 517 (533)
-+.+|+|+.- +...++. +.+-|.+||.+ .+|++|+....++..+|.+ +.-...--+-+.+.-+ ..+.++.
T Consensus 213 vv~~v~g~~~~~~~~L~~----~~d~V~fTGs~---~~g~~v~~~aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~ 285 (524)
T PRK09407 213 LWQVVTGPGPVVGTALVD----NADYLMFTGST---ATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVR 285 (524)
T ss_pred cEEEEecCCchHHHHHHh----cCCEEEEECCH---HHHHHHHHHHHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHH
Confidence 3677887542 2333333 25679999999 8999999887777777776 1111100011112222 2244445
Q ss_pred cccccccCceee
Q 009511 518 STSYAAHKTVTM 529 (533)
Q Consensus 518 ~~~~~~~~~~~~ 529 (533)
+.-..+||.|.-
T Consensus 286 ~~f~~sGQ~C~a 297 (524)
T PRK09407 286 ACFSNAGQLCIS 297 (524)
T ss_pred HHHhcCCCCCCC
Confidence 555567999874
No 399
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=50.44 E-value=19 Score=42.27 Aligned_cols=69 Identities=17% Similarity=0.242 Sum_probs=47.6
Q ss_pred CcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHH-----------Hhcc--CChhhc----ccceeccc
Q 009511 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK-----------LKLR--IPVEAQ----HNLVLSTS 520 (533)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~-----------~~~~--~~~~~~----~~l~~~~~ 520 (533)
|.+.+.|-..|+. -+|..||..+.+.|++|.+ .+.|.-++ ..++ ++++.. .++.-++.
T Consensus 332 ~~~i~~v~ViGaG---~MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 408 (737)
T TIGR02441 332 QRPVKTLAVLGAG---LMGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTPTLD 408 (737)
T ss_pred CCcccEEEEECCC---HhHHHHHHHHHhCCCcEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCC
Confidence 3467889999998 7999999999999999999 44444333 2221 222222 23334558
Q ss_pred ccccCceeeEe
Q 009511 521 YAAHKTVTMVT 531 (533)
Q Consensus 521 ~~~~~~~~~~~ 531 (533)
|++.++|.+|.
T Consensus 409 ~~~~~~aDlVi 419 (737)
T TIGR02441 409 YSGFKNADMVI 419 (737)
T ss_pred HHHhccCCeeh
Confidence 88888998873
No 400
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=50.43 E-value=22 Score=38.18 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=31.4
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEee--chhHHHHHhc
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATI--CKDDYEKLKL 505 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~--~~~~~~~~~~ 505 (533)
.|.++|.. .+|+++|..|+++|.+|.++ +.++.++++.
T Consensus 2 ~viIiG~G---~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~ 41 (453)
T PRK09496 2 KIIIVGAG---QVGYTLAENLSGENNDVTVIDTDEERLRRLQD 41 (453)
T ss_pred EEEEECCC---HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence 58889986 99999999999999999994 4566666654
No 401
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=50.35 E-value=17 Score=41.74 Aligned_cols=41 Identities=22% Similarity=0.261 Sum_probs=32.6
Q ss_pred hhhhcCCc----CcceEEEeccccchhhHHHHHHHhhhc-CcEEEeec
Q 009511 454 VVVNSLPK----TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATIC 496 (533)
Q Consensus 454 ~v~~~ip~----~~~~v~l~g~~~~~k~~~aia~~lc~~-~~~v~~~~ 496 (533)
.++++-|. ..+.|++||++ +=+|+.++.+|.++ |.+|..++
T Consensus 302 ~~~~~~~~~~~~~~~~VLVTGat--GFIGs~Lv~~Ll~~~g~~V~~l~ 347 (660)
T PRK08125 302 ARLNSKPACSAKRRTRVLILGVN--GFIGNHLTERLLRDDNYEVYGLD 347 (660)
T ss_pred CEecccchhhhhcCCEEEEECCC--chHHHHHHHHHHhCCCcEEEEEe
Confidence 34555554 66789999999 68999999999985 79998743
No 402
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=50.34 E-value=12 Score=40.82 Aligned_cols=61 Identities=16% Similarity=0.131 Sum_probs=37.0
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCC-hhhcccceecccccccCceee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP-VEAQHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~ 529 (533)
+++-|.+||.+ ++|++|+.. +.++++ ..-...-=+-+.+. +...+.++....+.+||.|.-
T Consensus 180 ~v~~I~fTGs~---~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a 242 (429)
T cd07121 180 DINLLVVTGGP---AVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIA 242 (429)
T ss_pred CccEEEeeCCH---HHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCc
Confidence 68999999999 899999875 355554 10000000111132 223344556777889999974
No 403
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=50.33 E-value=21 Score=37.65 Aligned_cols=42 Identities=17% Similarity=0.209 Sum_probs=36.2
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccC
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~ 507 (533)
=|++.|..+ +=++|.+|+-|=|||.=|.+ .+.|+++.+++|-
T Consensus 5 vVvI~Gs~~-~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~ 48 (299)
T PF08643_consen 5 VVVIAGSPH-DPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED 48 (299)
T ss_pred EEEEECCCC-CccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc
Confidence 366678755 79999999999999999988 7889999999886
No 404
>PLN02220 delta-9 acyl-lipid desaturase
Probab=50.11 E-value=97 Score=32.71 Aligned_cols=26 Identities=23% Similarity=0.213 Sum_probs=17.2
Q ss_pred CCcccccCCchhhhHhhhc-CCCCccC
Q 009511 237 PPLKFLMYTPSYHSLHHTQ-FRTNYSL 262 (533)
Q Consensus 237 p~Lk~li~Tp~~H~lHH~~-~~~NYG~ 262 (533)
+++..+-.+-.+|..||.. .+.++|.
T Consensus 234 ~~lallt~GEgwHNnHHafP~sar~G~ 260 (299)
T PLN02220 234 WWLSLFTMGESWHNNHHAFESSARQGL 260 (299)
T ss_pred HHHHHHhccccccccccCCccchhhCC
Confidence 3444444567799999998 4555564
No 405
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=50.05 E-value=31 Score=35.15 Aligned_cols=66 Identities=18% Similarity=0.230 Sum_probs=45.8
Q ss_pred ceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhc-CcEEEe-----echhHHHHHhccCC
Q 009511 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT-----ICKDDYEKLKLRIP 508 (533)
Q Consensus 440 l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~-~~~v~~-----~~~~~~~~~~~~~~ 508 (533)
++..-|.|..|+-.+.=....++ ..|||-|++ ..+....+..|.++ |++|.- .+.|+.+.+.+++.
T Consensus 83 ~~~~Rv~G~dl~~~ll~~~~~~~-~~v~llG~~--~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~ 154 (243)
T PRK03692 83 AQVSRVAGADLWEALMARAGKEG-TPVFLVGGK--PEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIH 154 (243)
T ss_pred CCCCeeChHHHHHHHHHHHHhcC-CeEEEECCC--HHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 33556778888877554434445 789999999 58889999999865 888764 44555566665544
No 406
>PLN02434 fatty acid hydroxylase
Probab=49.13 E-value=31 Score=35.25 Aligned_cols=41 Identities=17% Similarity=0.184 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhh---hhhccccCCccCc
Q 009511 127 GVILTILVHMGPVEFLYYWFHRALHHHY---LYSRYHSHHHSSV 167 (533)
Q Consensus 127 g~i~~lll~~lv~Df~~Yw~HRllH~~~---LY~r~HkvHHss~ 167 (533)
.++...++..++.|...|..|..--... -.|+.|..||--.
T Consensus 165 ~~~~G~l~gYl~Yd~~Hy~lH~~~p~~~~~r~lkr~H~~HHfk~ 208 (237)
T PLN02434 165 ALFGGGLLGYVMYDCTHYFLHHGQPSTDVLRNLKKYHLNHHFRD 208 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHcCCC
Confidence 3555566667788888888887532222 3688999999644
No 407
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=49.09 E-value=17 Score=39.99 Aligned_cols=65 Identities=14% Similarity=0.036 Sum_probs=39.5
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCCh-hhcccceecccccccCceee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~ 529 (533)
+++-|.+||++ ++|++|+....++..+|.+ +.-...-=+-+.+.. ...+.++...-+.+||.|.-
T Consensus 204 ~v~~V~fTGs~---~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a 270 (462)
T PRK13968 204 RIAAVTVTGSV---RAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAA 270 (462)
T ss_pred CCCEEEEECCH---HHHHHHHHHHhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcC
Confidence 58899999998 8999999988788777776 111110000011211 22234445555678998864
No 408
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=49.02 E-value=11 Score=41.17 Aligned_cols=47 Identities=19% Similarity=0.323 Sum_probs=31.1
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.+|+|+.-+.. .|-+-| +++-|++||.+ ++|+.|+....+ .+|.+
T Consensus 160 ~~~~v~g~~~~~~-~l~~~~-~v~~V~fTGs~---~~g~~i~~~a~~--~~v~l 206 (442)
T cd07084 160 DVTLINGDGKTMQ-ALLLHP-NPKMVLFTGSS---RVAEKLALDAKQ--ARIYL 206 (442)
T ss_pred ceEEeeCCcHHHH-HHHcCC-CCCEEEEECCH---HHHHHHHHhccC--CcEEE
Confidence 3677777543222 222233 48899999988 899999987654 56655
No 409
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=48.87 E-value=15 Score=38.59 Aligned_cols=30 Identities=20% Similarity=0.414 Sum_probs=26.8
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
|.+||+| .=+|++++..||+.|.+|.++++
T Consensus 1 IliTGgT--GlIG~~L~~~L~~~gh~v~iltR 30 (297)
T COG1090 1 ILITGGT--GLIGRALTARLRKGGHQVTILTR 30 (297)
T ss_pred CeEeccc--cchhHHHHHHHHhCCCeEEEEEc
Confidence 5799999 69999999999999999999443
No 410
>PRK06823 ornithine cyclodeaminase; Validated
Probab=48.78 E-value=76 Score=33.43 Aligned_cols=96 Identities=19% Similarity=0.085 Sum_probs=61.6
Q ss_pred HhcCCeEEEeccccccccccc-ccceeeccCCCCceeE-Ee-eCCcchh-------hhhhhcC-CcCcceEEEeccccch
Q 009511 407 DAKGVKVISLGLLNQGEELNR-NGEIYLERQPNKLKIK-VV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTAN 475 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln~-~g~l~~~~~p~~l~vr-vv-~g~~l~a-------a~v~~~i-p~~~~~v~l~g~~~~~ 475 (533)
+-.|+|++|.--=|....|-. .|.+.+. .|..-+.. +. ||+.||+ |+-.+-+ +++.+.+-+.|+.
T Consensus 62 ~~~g~K~v~~~p~N~~~glP~~~g~v~l~-d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G--- 137 (315)
T PRK06823 62 DQFVVKVSTGFYDNPAQGLPSNQGLMLAF-SAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG--- 137 (315)
T ss_pred CeEEEEEEeecCCCccCCCCCeeEEEEEE-ECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---
Confidence 347899998766666544422 3344443 55334445 54 9999974 2233445 7899999999998
Q ss_pred hhHHHHHHHhh--hcCcEEEe--echhHHHHHhcc
Q 009511 476 KVANAVASSLC--QMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 476 k~~~aia~~lc--~~~~~v~~--~~~~~~~~~~~~ 506 (533)
..|+.-+.++| +.--+|.+ -+.|+=+++.++
T Consensus 138 ~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~ 172 (315)
T PRK06823 138 IQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQY 172 (315)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHH
Confidence 89999999999 44445555 444554444443
No 411
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=48.61 E-value=22 Score=39.80 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=44.2
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHH-----------hcc--CChhh----cccceecccccc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL-----------KLR--IPVEA----QHNLVLSTSYAA 523 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~-----------~~~--~~~~~----~~~l~~~~~~~~ 523 (533)
.+.|-+.|+. -+|+.||..|++.|++|.+ .+.|.-++. .++ ..++. ..++.-++++++
T Consensus 5 ~~kV~VIGaG---~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~ 81 (503)
T TIGR02279 5 VVTVAVIGAG---AMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHA 81 (503)
T ss_pred ccEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHH
Confidence 4568899998 8999999999999999999 455544432 222 22221 122334557877
Q ss_pred cCceeeEe
Q 009511 524 HKTVTMVT 531 (533)
Q Consensus 524 ~~~~~~~~ 531 (533)
...|.+|.
T Consensus 82 l~~aDlVI 89 (503)
T TIGR02279 82 LADAGLVI 89 (503)
T ss_pred hCCCCEEE
Confidence 77888774
No 412
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=48.55 E-value=63 Score=29.93 Aligned_cols=92 Identities=18% Similarity=0.136 Sum_probs=53.6
Q ss_pred hHhHHHHHHHHHHHHhcCCeEEEecccccccccccccceeec--c-CCCCcee-----EEeeCCcchhhhhhhcCCcCcc
Q 009511 393 EAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLE--R-QPNKLKI-----KVVDGSSLAAAVVVNSLPKTTA 464 (533)
Q Consensus 393 ~~in~~ie~ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~--~-~p~~l~v-----rvv~g~~l~aa~v~~~ip~~~~ 464 (533)
+.+=.-|.+.+..|.+.|+.|+-.. +.+ .++|++.=+ . .|++.-+ --..|+.|.. .|++ .|++
T Consensus 19 ~~~~~~i~~l~~~ar~~g~pVi~~~---~~~--~~~g~~~~~l~~~~~~~~vi~K~~~saf~~t~L~~--~L~~--~gi~ 89 (157)
T cd01012 19 DELINNTVKLAKAAKLLDVPVILTE---QYP--KGLGPTVPELREVFPDAPVIEKTSFSCWEDEAFRK--ALKA--TGRK 89 (157)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEe---eCC--CCCCCchHHHHhhCCCCCceecccccCcCCHHHHH--HHHh--cCCC
Confidence 3344446666677889999999652 111 123333211 1 2311100 1112222322 2332 4889
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
++.++|-.+ +=-=.+.|..+.++|++|.+
T Consensus 90 ~lii~G~~T-~~CV~~Ta~~a~~~g~~v~v 118 (157)
T cd01012 90 QVVLAGLET-HVCVLQTALDLLEEGYEVFV 118 (157)
T ss_pred EEEEEEeec-cHHHHHHHHHHHHCCCEEEE
Confidence 999999997 55568888889999999999
No 413
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=48.20 E-value=23 Score=35.15 Aligned_cols=45 Identities=20% Similarity=0.245 Sum_probs=36.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhccCChh
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE 510 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~~~~~ 510 (533)
+-|+.||+. .-+|++|++.|.+-|-||+- -.++..++|-+|-|.-
T Consensus 8 ~~vlvTgag--aGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~ 54 (245)
T KOG1207|consen 8 VIVLVTGAG--AGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSL 54 (245)
T ss_pred eEEEeeccc--ccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcc
Confidence 457889988 47999999999999999998 4456677888887654
No 414
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=48.18 E-value=17 Score=39.57 Aligned_cols=31 Identities=19% Similarity=0.189 Sum_probs=24.6
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
++++-|.+||.+ ++|++|+....++..+|.+
T Consensus 188 ~~v~~V~fTGs~---~~g~~i~~~aa~~~~~~~l 218 (443)
T cd07152 188 PNVAMISFTGST---AVGRKVGEAAGRHLKKVSL 218 (443)
T ss_pred CCCCEEEEECCH---HHHHHHHHHHHhcCCcEEE
Confidence 377888899988 8888888877777777766
No 415
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=48.13 E-value=18 Score=35.32 Aligned_cols=27 Identities=19% Similarity=0.329 Sum_probs=20.5
Q ss_pred EEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 467 LLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 467 ~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
|+|-..| +|.|.+||.++++||-.|.+
T Consensus 22 ~ItN~SS-G~~G~~lA~~~~~~Ga~V~l 48 (185)
T PF04127_consen 22 FITNRSS-GKMGAALAEEAARRGAEVTL 48 (185)
T ss_dssp EEEES---SHHHHHHHHHHHHTT-EEEE
T ss_pred EecCCCc-CHHHHHHHHHHHHCCCEEEE
Confidence 3443444 79999999999999999998
No 416
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=47.98 E-value=25 Score=36.52 Aligned_cols=90 Identities=16% Similarity=0.209 Sum_probs=49.2
Q ss_pred CceeccchhhhHhHHHHHHHHHHHHhcCCeEEEecccccccccccccceeeccCCCCceeEEeeCCcchhhhhhhcCCcC
Q 009511 383 IVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT 462 (533)
Q Consensus 383 ~~~y~~~~~~~~in~~ie~ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p~~l~vrvv~g~~l~aa~v~~~ip~~ 462 (533)
|+-=.+|. |+.|-+++.+.=.+|++.|+ .|-= .+++|.+ .=-=-||.....+.--..++..
T Consensus 63 G~nVTiP~-K~~~~~~~D~l~~~A~~iGA-------VNTv--~~~~g~l---------~G~NTD~~Gf~~~l~~~~~~~~ 123 (288)
T PRK12749 63 GTGVSMPN-KQLACEYVDELTPAAKLVGA-------INTI--VNDDGYL---------RGYNTDGTGHIRAIKESGFDIK 123 (288)
T ss_pred EEEECcCC-HHHHHHHhccCCHHHHHhCc-------eeEE--EccCCEE---------EEEecCHHHHHHHHHhcCCCcC
Confidence 44445554 45555666665566776664 3311 0112211 1111233333333322233333
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCc-EEEe
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT 494 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~-~v~~ 494 (533)
-|.|++.|+.. .|||||.+|++.|+ +|.+
T Consensus 124 ~k~vlvlGaGG---aarAi~~~l~~~g~~~i~i 153 (288)
T PRK12749 124 GKTMVLLGAGG---ASTAIGAQGAIEGLKEIKL 153 (288)
T ss_pred CCEEEEECCcH---HHHHHHHHHHHCCCCEEEE
Confidence 36899999984 38999999999998 5666
No 417
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=47.94 E-value=18 Score=37.99 Aligned_cols=85 Identities=18% Similarity=0.192 Sum_probs=52.5
Q ss_pred CCCceeEEeeCCcc--hhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCC-hhhc
Q 009511 437 PNKLKIKVVDGSSL--AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP-VEAQ 512 (533)
Q Consensus 437 p~~l~vrvv~g~~l--~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~-~~~~ 512 (533)
| +--+.+|+|+.= +.+.+.+ | +++-|.+||.+ +.|+.|+.++.+++.++++ ....-.--+-+.+. +...
T Consensus 148 p-~~~v~~~~~~~~~~~~~l~~~--~-~vd~v~~tGs~---~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa 220 (367)
T cd06534 148 P-PGVVNVVPGGGDEVGAALLSH--P-RVDKISFTGST---AVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAV 220 (367)
T ss_pred C-cCeEEEEEcCchhHHHHHhcC--C-CcCEEEEECCH---HHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHH
Confidence 5 555778888653 3332222 2 58899999987 9999999999988888877 21111111111222 2333
Q ss_pred ccceecccccccCcee
Q 009511 513 HNLVLSTSYAAHKTVT 528 (533)
Q Consensus 513 ~~l~~~~~~~~~~~~~ 528 (533)
+.++.+..+.+||.|.
T Consensus 221 ~~i~~~~~~~~gq~C~ 236 (367)
T cd06534 221 EGAVFGAFFNAGQICT 236 (367)
T ss_pred HHHHHHHHhcCCCCCC
Confidence 4555566667888886
No 418
>PRK09620 hypothetical protein; Provisional
Probab=47.90 E-value=19 Score=36.25 Aligned_cols=20 Identities=20% Similarity=0.307 Sum_probs=19.1
Q ss_pred hhhHHHHHHHhhhcCcEEEe
Q 009511 475 NKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 475 ~k~~~aia~~lc~~~~~v~~ 494 (533)
+|+|+++|.+|.++|.+|++
T Consensus 29 GfiGs~LA~~L~~~Ga~V~l 48 (229)
T PRK09620 29 GTIGRIIAEELISKGAHVIY 48 (229)
T ss_pred CHHHHHHHHHHHHCCCeEEE
Confidence 79999999999999999986
No 419
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=47.75 E-value=27 Score=37.97 Aligned_cols=43 Identities=19% Similarity=0.216 Sum_probs=29.5
Q ss_pred ceEEEeccccchhhHHHHHHHhh-hcCcEEEe-ech----hHHHHHhccCC
Q 009511 464 AHVLLRGTVTANKVANAVASSLC-QMGIKVAT-ICK----DDYEKLKLRIP 508 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc-~~~~~v~~-~~~----~~~~~~~~~~~ 508 (533)
+.|||||+| +=+|+-+.+.|- |+..||.. ++. .-.++|++-++
T Consensus 1 ~~vlLTGAT--GFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~ 49 (382)
T COG3320 1 RNVLLTGAT--GFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFD 49 (382)
T ss_pred CeEEEecCc--hHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhh
Confidence 368999999 689966666555 77778888 332 23666666554
No 420
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=47.65 E-value=17 Score=39.59 Aligned_cols=66 Identities=9% Similarity=0.039 Sum_probs=40.8
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceecccccccCceee
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 529 (533)
++++-|.+||.+ ++|++|+....++..+|.+ +.-...--+-+.+..| ..+.++.+..+.+||.|.-
T Consensus 197 ~~v~~V~ftGs~---~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a 264 (451)
T cd07150 197 PRVRMVTFTGST---AVGREIAEKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMS 264 (451)
T ss_pred CCCCEEEEECcH---HHHHHHHHHHhhcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCC
Confidence 366889999999 8999999988888878776 1111111111122222 2334445556778998864
No 421
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=47.49 E-value=17 Score=37.44 Aligned_cols=28 Identities=14% Similarity=0.226 Sum_probs=24.3
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.|++||++ +=||++++..|+++|.++++
T Consensus 2 kilITGgt--G~iG~~l~~~L~~~g~~~v~ 29 (352)
T PRK10084 2 KILVTGGA--GFIGSAVVRHIINNTQDSVV 29 (352)
T ss_pred eEEEECCC--cHHhHHHHHHHHHhCCCeEE
Confidence 48999999 69999999999999976443
No 422
>PRK08116 hypothetical protein; Validated
Probab=47.39 E-value=28 Score=35.62 Aligned_cols=41 Identities=27% Similarity=0.409 Sum_probs=32.0
Q ss_pred eEEEeccccchh--hHHHHHHHhhhcCcEEEeec-hhHHHHHhc
Q 009511 465 HVLLRGTVTANK--VANAVASSLCQMGIKVATIC-KDDYEKLKL 505 (533)
Q Consensus 465 ~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~-~~~~~~~~~ 505 (533)
-++|.|....+| ++.|||.+|+++|.+|+.++ .+-...++.
T Consensus 116 gl~l~G~~GtGKThLa~aia~~l~~~~~~v~~~~~~~ll~~i~~ 159 (268)
T PRK08116 116 GLLLWGSVGTGKTYLAACIANELIEKGVPVIFVNFPQLLNRIKS 159 (268)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHH
Confidence 389999887678 89999999999999998844 444555543
No 423
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=47.33 E-value=22 Score=38.12 Aligned_cols=42 Identities=21% Similarity=0.295 Sum_probs=34.7
Q ss_pred hhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEeechhH
Q 009511 456 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499 (533)
Q Consensus 456 ~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~ 499 (533)
++.++++.+.|.+.|.+ +.+|..+|.+|.++|..|.+.+.+.
T Consensus 91 ~~~~~~~~~~I~IiGG~--GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 91 FKTLNPDLRPVVIVGGK--GQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred ccccCcccceEEEEcCC--ChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 46677778889999966 4999999999999999999955443
No 424
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=46.95 E-value=66 Score=31.44 Aligned_cols=43 Identities=14% Similarity=0.121 Sum_probs=32.3
Q ss_pred cCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHH
Q 009511 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (533)
Q Consensus 458 ~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~ 503 (533)
.++++ +.|++.|+. +=+|.+++..+..+|.+|.+ .+.++-+.+
T Consensus 133 ~~~~g-~~vlI~g~~--g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 177 (320)
T cd05286 133 PVKPG-DTVLVHAAA--GGVGLLLTQWAKALGATVIGTVSSEEKAELA 177 (320)
T ss_pred CCCCC-CEEEEEcCC--chHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 34444 679999987 47999999989999999988 344555555
No 425
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=46.94 E-value=90 Score=29.88 Aligned_cols=40 Identities=23% Similarity=0.178 Sum_probs=31.2
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHh
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~ 504 (533)
..+.|+.+|+. + +|.+++..+...|.+|.. .++++.+.++
T Consensus 134 ~~~~vli~g~~--~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 175 (271)
T cd05188 134 PGDTVLVLGAG--G-VGLLAAQLAKAAGARVIVTDRSDEKLELAK 175 (271)
T ss_pred CCCEEEEECCC--H-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence 34579999998 7 999999988899999888 4445555553
No 426
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.92 E-value=24 Score=36.10 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=30.1
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
+.-|.|+.||-.+ +-+|.|+|+-+.|+|.+|.-+
T Consensus 5 ~~~k~VlItgcs~-GGIG~ala~ef~~~G~~V~At 38 (289)
T KOG1209|consen 5 SQPKKVLITGCSS-GGIGYALAKEFARNGYLVYAT 38 (289)
T ss_pred cCCCeEEEeecCC-cchhHHHHHHHHhCCeEEEEE
Confidence 4567899999988 689999999999999999983
No 427
>PRK06921 hypothetical protein; Provisional
Probab=46.73 E-value=34 Score=35.02 Aligned_cols=44 Identities=23% Similarity=0.281 Sum_probs=33.5
Q ss_pred CcceEEEeccccchh--hHHHHHHHhhhc-CcEEEe-echhHHHHHhc
Q 009511 462 TTAHVLLRGTVTANK--VANAVASSLCQM-GIKVAT-ICKDDYEKLKL 505 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k--~~~aia~~lc~~-~~~v~~-~~~~~~~~~~~ 505 (533)
...-++|+|.+..+| ++.|||..|+++ |+.|+- ...+.++.++.
T Consensus 116 ~~~~l~l~G~~G~GKThLa~aia~~l~~~~g~~v~y~~~~~l~~~l~~ 163 (266)
T PRK06921 116 RKNSIALLGQPGSGKTHLLTAAANELMRKKGVPVLYFPFVEGFGDLKD 163 (266)
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHhhhcCceEEEEEHHHHHHHHHH
Confidence 345689999988788 899999999998 999877 33444555533
No 428
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=46.72 E-value=20 Score=39.14 Aligned_cols=84 Identities=12% Similarity=0.117 Sum_probs=49.4
Q ss_pred CceeEEeeCCc-chhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChhh-cccc
Q 009511 439 KLKIKVVDGSS-LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEA-QHNL 515 (533)
Q Consensus 439 ~l~vrvv~g~~-l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l 515 (533)
+=-+.+|.|+. -+.+ ++.. | ++.|.+||++ .+|+.|+....+++.+|.+ +.-...-=+-+.+.-+. .+.+
T Consensus 164 ~g~v~vv~g~~~~~~~-l~~~-~--vd~v~ftGs~---~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i 236 (436)
T cd07135 164 PDAFQVVQGGVPETTA-LLEQ-K--FDKIFYTGSG---RVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRI 236 (436)
T ss_pred cCEEEEEcCCchhHHH-HHhC-C--CCEEEEECCc---HHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHH
Confidence 33466777643 2333 3332 4 8899999999 8999999977777777776 11111111111232222 3455
Q ss_pred eecccccccCceee
Q 009511 516 VLSTSYAAHKTVTM 529 (533)
Q Consensus 516 ~~~~~~~~~~~~~~ 529 (533)
+.+....+||.|.-
T Consensus 237 ~~~~~~~~GQ~C~a 250 (436)
T cd07135 237 LWGKFGNAGQICVA 250 (436)
T ss_pred HHHHhccCCceecC
Confidence 56666678898864
No 429
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=46.72 E-value=34 Score=37.36 Aligned_cols=49 Identities=24% Similarity=0.241 Sum_probs=32.8
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+|+|+.-.+.--|-+ .++++-|++||++ .+|+.|+....+++.+|.+
T Consensus 183 ~~~v~g~~~~~~~~l~~-~~~v~~V~fTGs~---~~g~~i~~~aa~~~~~v~l 231 (456)
T cd07145 183 INVVTGYGSEVGDEIVT-NPKVNMISFTGST---AVGLLIASKAGGTGKKVAL 231 (456)
T ss_pred EEEEeCCCchHHHHHhc-CCCCCEEEEECCH---HHHHHHHHHHhhcCCceEE
Confidence 66777643221111111 1378888999988 7899999988888888865
No 430
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=46.28 E-value=18 Score=39.91 Aligned_cols=31 Identities=6% Similarity=0.049 Sum_probs=26.9
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
++++-|.+||++ .+|++|+....++..+|.+
T Consensus 213 ~~v~~V~fTGS~---~~G~~i~~~aa~~l~~~~l 243 (488)
T TIGR02299 213 PDVKAVSFTGET---ATGSIIMRNGADTLKRFSM 243 (488)
T ss_pred CCcCEEEEECcH---HHHHHHHHHHHhcCCeEEE
Confidence 467889999999 8999999988788888877
No 431
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=46.22 E-value=27 Score=40.78 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=46.9
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHH-----------Hhcc--CChhhc----ccceecccc
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK-----------LKLR--IPVEAQ----HNLVLSTSY 521 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~-----------~~~~--~~~~~~----~~l~~~~~~ 521 (533)
++.++|-..|+. =+|+.||..+++.|++|.+ .+.|.-++ ..++ +.++.. .++..++.|
T Consensus 311 ~~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 387 (715)
T PRK11730 311 KPVKQAAVLGAG---IMGGGIAYQSASKGVPVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRPTLDY 387 (715)
T ss_pred cccceEEEECCc---hhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH
Confidence 467889999998 6899999999999999999 55544332 1111 222222 233345588
Q ss_pred cccCceeeEe
Q 009511 522 AAHKTVTMVT 531 (533)
Q Consensus 522 ~~~~~~~~~~ 531 (533)
.+.++|.+|.
T Consensus 388 ~~~~~aDlVi 397 (715)
T PRK11730 388 AGFERVDVVV 397 (715)
T ss_pred HHhcCCCEEE
Confidence 8888998874
No 432
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=46.19 E-value=20 Score=38.60 Aligned_cols=29 Identities=31% Similarity=0.365 Sum_probs=26.7
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|.|+++|.. +.|+++|.+|.++|.+|...
T Consensus 6 k~v~v~G~g---~~G~s~a~~l~~~G~~V~~~ 34 (447)
T PRK02472 6 KKVLVLGLA---KSGYAAAKLLHKLGANVTVN 34 (447)
T ss_pred CEEEEEeeC---HHHHHHHHHHHHCCCEEEEE
Confidence 678999998 69999999999999999993
No 433
>cd03508 Delta4-sphingolipid-FADS-like The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase (MLD), reported to modulate biosynthesis of the epidermal growth factor receptor; and other related proteins. These proteins are found in various eukaryotes including vertebrates, higher plants, and fungi. Studies show that MLD is localized to the endoplasmic reticulum. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for
Probab=46.13 E-value=1.8e+02 Score=30.32 Aligned_cols=20 Identities=35% Similarity=0.632 Sum_probs=15.0
Q ss_pred CCcccccCCchhhhHhhhcC
Q 009511 237 PPLKFLMYTPSYHSLHHTQF 256 (533)
Q Consensus 237 p~Lk~li~Tp~~H~lHH~~~ 256 (533)
++++.+...-.+|..||...
T Consensus 221 ~~~~~~~~n~~yH~~HH~~p 240 (289)
T cd03508 221 GPLNLLTFNVGYHNEHHDFP 240 (289)
T ss_pred HHHHHHhhccChHHHhcCCC
Confidence 44566666788999999974
No 434
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=46.09 E-value=25 Score=34.86 Aligned_cols=69 Identities=20% Similarity=0.239 Sum_probs=52.3
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEeechhHHHHHhccCChhhcccceecc-ccccc-CceeeEe
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST-SYAAH-KTVTMVT 531 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~-~~~~~~~ 531 (533)
||=-||++|...-.-+...+|.+|.++|+-|+=++.-+|=- +++-|+|...-|-+.- +|++. +.-++|-
T Consensus 2 Dt~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw-~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvL 72 (192)
T PF06057_consen 2 DTLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFW-SERTPEQTAADLARIIRHYRARWGRKRVVL 72 (192)
T ss_pred CEEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHh-hhCCHHHHHHHHHHHHHHHHHHhCCceEEE
Confidence 44568999998878899999999999999999977777654 4557888888877544 77644 4455543
No 435
>PRK06940 short chain dehydrogenase; Provisional
Probab=45.94 E-value=31 Score=34.55 Aligned_cols=28 Identities=25% Similarity=0.315 Sum_probs=23.2
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-|++||+ + =+|+++|..|+ +|.+|++.
T Consensus 3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~ 30 (275)
T PRK06940 3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLA 30 (275)
T ss_pred CEEEEECC-C--hHHHHHHHHHh-CCCEEEEE
Confidence 34788997 3 69999999996 89999983
No 436
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=45.75 E-value=40 Score=35.12 Aligned_cols=64 Identities=25% Similarity=0.283 Sum_probs=42.5
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCc--EEEe--echhHHHH----HhccCChhhcccceecccccccCceeeEee
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAAHKTVTMVTI 532 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~--~v~~--~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 532 (533)
+|-+.|+. +||.++|..|+++|+ .|.+ .++++-+. +....+.. ....+..+.|++.+.|.+|.|
T Consensus 2 kI~IIGaG---~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~-~~~~i~~~d~~~l~~aDiVii 73 (308)
T cd05292 2 KVAIVGAG---FVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFV-KPVRIYAGDYADCKGADVVVI 73 (308)
T ss_pred EEEEECCC---HHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccccc-CCeEEeeCCHHHhCCCCEEEE
Confidence 47788986 999999999999995 6666 33443432 33333322 223445568888888888765
No 437
>PRK06526 transposase; Provisional
Probab=45.65 E-value=21 Score=36.32 Aligned_cols=31 Identities=26% Similarity=0.386 Sum_probs=27.1
Q ss_pred ceEEEeccccchh--hHHHHHHHhhhcCcEEEe
Q 009511 464 AHVLLRGTVTANK--VANAVASSLCQMGIKVAT 494 (533)
Q Consensus 464 ~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~ 494 (533)
..|+++|.+..+| ++.||+..+|++|.+|..
T Consensus 99 ~nlll~Gp~GtGKThLa~al~~~a~~~g~~v~f 131 (254)
T PRK06526 99 ENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLF 131 (254)
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHCCCchhh
Confidence 3579998877778 999999999999999987
No 438
>cd03522 MoeA_like MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.
Probab=45.64 E-value=31 Score=36.50 Aligned_cols=80 Identities=20% Similarity=0.375 Sum_probs=57.0
Q ss_pred cCCeEEEecc----ccccccc-ccccceeeccCCCCceeEEee-CCcchhhhhhhcCCcCcceEEEeccccchhhHHHHH
Q 009511 409 KGVKVISLGL----LNQGEEL-NRNGEIYLERQPNKLKIKVVD-GSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVA 482 (533)
Q Consensus 409 ~g~kv~slg~----ln~~~~l-n~~g~l~~~~~p~~l~vrvv~-g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia 482 (533)
-|+|+|+|+. +.+.+++ .+.|-.-|+-+. .+||.|+. ||-+. .|... +|-+.+|+
T Consensus 125 A~~riiPl~v~~~~~~~a~~~~~~~gi~~V~v~r-~~rv~II~TG~Ev~-----------------~G~i~-D~~~~~l~ 185 (312)
T cd03522 125 ATVKIIPLAVPEALVERAEALARDGPLLRVAPFR-PLRVGLIVTGSEVY-----------------GGRIE-DKFGPVLR 185 (312)
T ss_pred EEEEEeeeecCHHHHHHHHHHHHhCCCcEEEecC-CCEEEEEEcCCcCC-----------------CCcEE-EhHHHHHH
Confidence 3688888875 5666655 456788888887 88999885 76542 23332 57788999
Q ss_pred HHhhhcCcEEEe--echhHHHHHhccC
Q 009511 483 SSLCQMGIKVAT--ICKDDYEKLKLRI 507 (533)
Q Consensus 483 ~~lc~~~~~v~~--~~~~~~~~~~~~~ 507 (533)
..|-+.|.+|.- .-.|+.+.|++.+
T Consensus 186 ~~L~~~G~~v~~~~iv~Dd~~~I~~ai 212 (312)
T cd03522 186 ARLAALGVELVEQVIVPHDEAAIAAAI 212 (312)
T ss_pred HHHHHCCCEEEEEEEcCCCHHHHHHHH
Confidence 999999998876 4567777777653
No 439
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=45.62 E-value=66 Score=31.58 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=31.2
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHh
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~ 504 (533)
.+.|+++|+. +=+|.+++..+.++|++|.. .+.++-+.++
T Consensus 140 ~~~vli~g~~--~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 181 (323)
T cd08241 140 GETVLVLGAA--GGVGLAAVQLAKALGARVIAAASSEEKLALAR 181 (323)
T ss_pred CCEEEEEcCC--chHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH
Confidence 3688999997 58999999999999999888 3445555443
No 440
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=45.43 E-value=80 Score=32.96 Aligned_cols=92 Identities=14% Similarity=0.136 Sum_probs=58.7
Q ss_pred HhcCCeEEEecccccccccccccceeeccCCCCceeEEeeCCcchh-------hhhhhcCCcCcceEEEeccccchhhHH
Q 009511 407 DAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVAN 479 (533)
Q Consensus 407 ~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p~~l~vrvv~g~~l~a-------a~v~~~ip~~~~~v~l~g~~~~~k~~~ 479 (533)
+..|+|+++.. .+ +-.|.+.+.--.+..-.=+.||+.||+ |+-.+-+.++.+.+-+.|+. .-|+
T Consensus 60 ~~~g~K~~~~~---~~---~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~ 130 (301)
T PRK06407 60 HIAGLKTYIAG---RN---GARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAE 130 (301)
T ss_pred CeeEEEEEecC---CC---CccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHH
Confidence 34689988752 11 233444444333466677899999985 34445556799999999998 8899
Q ss_pred HHHHHhhh-cCc-EEEe--echhHHHHHhccC
Q 009511 480 AVASSLCQ-MGI-KVAT--ICKDDYEKLKLRI 507 (533)
Q Consensus 480 aia~~lc~-~~~-~v~~--~~~~~~~~~~~~~ 507 (533)
.-+.++|+ |++ +|.+ -+.++=+.+.++.
T Consensus 131 ~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~ 162 (301)
T PRK06407 131 TQLEGMASVYNPKRIRVYSRNFDHARAFAERF 162 (301)
T ss_pred HHHHHHHhcCCCCEEEEECCCHHHHHHHHHHH
Confidence 99999982 444 4444 3444444444443
No 441
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=45.30 E-value=39 Score=31.52 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=31.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
++|=+.|-. ++|+++|..|-++|.+|.. .++++-++++++
T Consensus 2 ~~Ig~IGlG---~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~ 43 (163)
T PF03446_consen 2 MKIGFIGLG---NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA 43 (163)
T ss_dssp BEEEEE--S---HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT
T ss_pred CEEEEEchH---HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh
Confidence 456677776 9999999999999999999 566777777655
No 442
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=45.05 E-value=20 Score=39.25 Aligned_cols=48 Identities=17% Similarity=0.188 Sum_probs=33.5
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+|.|+.-+... |-+ .++++-|.+||++ .+|+.|+....+++.+|.+
T Consensus 184 v~~v~g~~~~~~~-L~~-~~~v~~V~ftGs~---~~g~~v~~~a~~~~~~~~l 231 (465)
T cd07098 184 VQLVTCLPETAEA-LTS-HPVIDHITFIGSP---PVGKKVMAAAAESLTPVVL 231 (465)
T ss_pred EEEEECCHHHHHH-Hhc-CCCCCEEEEECCH---HHHHHHHHHHHhcCCeEEE
Confidence 5566665311111 111 3477889999988 8999999998888889887
No 443
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=44.99 E-value=18 Score=39.44 Aligned_cols=66 Identities=12% Similarity=0.039 Sum_probs=40.0
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCCh-hhcccceecccccccCceee
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~ 529 (533)
++++-|.+||++ ++|++|+...+++..+|.+ +.-...--+-+.+.- ...+.++.+.-..+||.|.-
T Consensus 196 ~~i~~v~ftGs~---~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a 263 (448)
T TIGR01780 196 PLVRKISFTGST---NVGKILMKQSASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVC 263 (448)
T ss_pred CCCCEEEEECcH---HHHHHHHHHHhhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccC
Confidence 467889999998 8999999998888888877 111100000011111 12233444445568898864
No 444
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=44.51 E-value=21 Score=36.61 Aligned_cols=27 Identities=33% Similarity=0.502 Sum_probs=24.4
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.|++.|.|+ = ||.+|..|+++|.+|+.
T Consensus 2 ~ILvlGGT~--e-gr~la~~L~~~g~~v~~ 28 (256)
T TIGR00715 2 TVLLMGGTV--D-SRAIAKGLIAQGIEILV 28 (256)
T ss_pred eEEEEechH--H-HHHHHHHHHhCCCeEEE
Confidence 589999993 3 99999999999999998
No 445
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=44.47 E-value=22 Score=34.88 Aligned_cols=41 Identities=27% Similarity=0.307 Sum_probs=33.3
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEeechhHHHHHhc
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKL 505 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~~~ 505 (533)
.-+.|++.|+. ++|...|..|.+.|.+|.+++++.-+.+++
T Consensus 9 ~~k~vLVIGgG---~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~ 49 (202)
T PRK06718 9 SNKRVVIVGGG---KVAGRRAITLLKYGAHIVVISPELTENLVK 49 (202)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCeEEEEcCCCCHHHHH
Confidence 44689999998 999999999999999999977654444443
No 446
>PRK13508 tagatose-6-phosphate kinase; Provisional
Probab=44.45 E-value=29 Score=35.38 Aligned_cols=96 Identities=25% Similarity=0.333 Sum_probs=58.5
Q ss_pred HHHHHHHHHhcCCe--EEEeccccccc-ccccccceeeccCCCCceeEEee----CCcchhhhhhhcCC-cCcceEEEec
Q 009511 399 IEEAILEADAKGVK--VISLGLLNQGE-ELNRNGEIYLERQPNKLKIKVVD----GSSLAAAVVVNSLP-KTTAHVLLRG 470 (533)
Q Consensus 399 ie~ai~~a~~~g~k--v~slg~ln~~~-~ln~~g~l~~~~~p~~l~vrvv~----g~~l~aa~v~~~ip-~~~~~v~l~g 470 (533)
+++++.+..+.|++ |+++|. ++- -.+++ +.+ ..| -.++++|| |++.+|+.+.--+- .+.+|
T Consensus 203 ~~~~~~~~~~~g~~~vvvT~G~--~G~~~~~~~-~~~--~~~-~~~v~vvDttGAGDaF~Agfi~~l~~g~~~~~----- 271 (309)
T PRK13508 203 LKEVLQQPLFEGIEWIIVSLGA--DGAFAKHND-TFY--KVD-IPKIEVVNPVGSGDSTVAGIASGLLHQEDDAD----- 271 (309)
T ss_pred HHHHHHHHHHcCCCEEEEecCC--CceEEEeCC-ceE--EEe-CCCccccCCcChhHHHHHHHHHHHHcCCCHHH-----
Confidence 34444443355765 467775 221 12222 222 224 55788999 99999988765331 11111
Q ss_pred cccchhhHHHHHHHhhhcCcEEEeechhHHHHHhccCCh
Q 009511 471 TVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPV 509 (533)
Q Consensus 471 ~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~~~~~~~ 509 (533)
+ -|.|.|.|..-|++-..+.. ++++++.+.+++..
T Consensus 272 a---l~~a~a~aa~~~~~~~~~~~-~~~~~~~~~~~i~~ 306 (309)
T PRK13508 272 L---LKKANVLGMLNAQEKQTGHV-NMANYDELYNQIEV 306 (309)
T ss_pred H---HHHHHHHHHHHhcCcCcCCC-CHHHHHHHHhceEE
Confidence 2 38999999999977777766 88899988877543
No 447
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.12 E-value=37 Score=35.58 Aligned_cols=43 Identities=16% Similarity=0.154 Sum_probs=34.4
Q ss_pred chhhhhhhcC-----CcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 450 l~aa~v~~~i-----p~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-|+++|+.-| +-.-|+|.+.|+. .=||+.+|..|.++|.+|.+
T Consensus 140 cTp~ai~~ll~~~~i~l~Gk~vvVIGrs--~~VG~pla~lL~~~gatVtv 187 (286)
T PRK14175 140 CTPLGIMEILKHADIDLEGKNAVVIGRS--HIVGQPVSKLLLQKNASVTI 187 (286)
T ss_pred CcHHHHHHHHHHcCCCCCCCEEEEECCC--chhHHHHHHHHHHCCCeEEE
Confidence 4566655433 4566899999998 24999999999999999999
No 448
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=43.77 E-value=43 Score=36.96 Aligned_cols=50 Identities=24% Similarity=0.246 Sum_probs=34.2
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.+|.|+.-.++.-|-+= ++++-|.+||++ ++|+.|+.+..++..+|.+
T Consensus 194 vv~~v~g~~~~~~~~L~~~-~~v~~V~fTGS~---~~G~~i~~~aa~~~~p~~l 243 (479)
T cd07116 194 VVNVVNGFGLEAGKPLASS-KRIAKVAFTGET---TTGRLIMQYASENIIPVTL 243 (479)
T ss_pred cEEEEecCchhHHHHHhcC-CCcCEEEEECCH---HHHHHHHHHHHcCCCeEEE
Confidence 3556666432222222222 348899999999 9999999998888888876
No 449
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=43.68 E-value=21 Score=38.78 Aligned_cols=65 Identities=17% Similarity=0.125 Sum_probs=38.1
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceecccccccCceee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 529 (533)
+++-|++||++ .+|+.|+....+++.++.+ +.-...-=+-+.+.-| ..+.++.+.-..+||.|.-
T Consensus 196 ~v~~V~fTGs~---~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a 262 (450)
T cd07092 196 RVRMVSLTGSV---RTGKKVARAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTA 262 (450)
T ss_pred CCCEEEEECcH---HHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCC
Confidence 68889999988 8899998888777777776 1111000000112222 2233444455568888864
No 450
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=43.50 E-value=20 Score=39.66 Aligned_cols=61 Identities=15% Similarity=0.098 Sum_probs=37.5
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccC-ChhhcccceecccccccCceee
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI-PVEAQHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~ 529 (533)
+++-|++||++ .+|++|+. .+.++++ ..-...--+-+.+ .+...+.++....+.+||.|.-
T Consensus 212 ~vd~I~fTGS~---~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A 274 (465)
T PRK15398 212 GIALLVVTGGP---AVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIA 274 (465)
T ss_pred CccEEEeeCCH---HHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCC
Confidence 58999999999 99999998 3556655 1000000011112 2233455557778889999974
No 451
>COG4693 PchG Oxidoreductase (NAD-binding), involved in siderophore biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=43.30 E-value=13 Score=39.04 Aligned_cols=60 Identities=23% Similarity=0.312 Sum_probs=44.5
Q ss_pred hcCCcCcc--eEEEeccccchhhHHHHHHHhhhcCcEEEe---echhHHHHHhccCChhhccccee
Q 009511 457 NSLPKTTA--HVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVL 517 (533)
Q Consensus 457 ~~ip~~~~--~v~l~g~~~~~k~~~aia~~lc~~~~~v~~---~~~~~~~~~~~~~~~~~~~~l~~ 517 (533)
.+||.|.+ -|..+++.- +-=|.++|.+|-+|||.|+. +..++-+.+++-|...-+.|+|.
T Consensus 58 eelpd~idiACVvVrsai~-Gg~Gs~larall~RGi~VlqEHPl~p~di~~l~rlA~rqG~~y~vN 122 (361)
T COG4693 58 EELPDDIDIACVVVRSAIV-GGQGSALARALLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLVN 122 (361)
T ss_pred hhCCCCCCeEEEEEeeeee-cCCcHHHHHHHHHcccHHHHhCCCCHHHHHHHHHHHHHhCcEEEEe
Confidence 45555433 455555443 23389999999999999998 88899999998887777777773
No 452
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=43.29 E-value=29 Score=38.28 Aligned_cols=38 Identities=24% Similarity=0.427 Sum_probs=31.4
Q ss_pred hhcCCc-CcceEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 456 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 456 ~~~ip~-~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
|..+|+ +-+.|.+.|.. +.|+|+|.+|.++|.+|...+
T Consensus 7 ~~~~~~~~~~~v~v~G~G---~sG~a~a~~L~~~G~~V~~~D 45 (473)
T PRK00141 7 LSALPQELSGRVLVAGAG---VSGRGIAAMLSELGCDVVVAD 45 (473)
T ss_pred hhhcccccCCeEEEEccC---HHHHHHHHHHHHCCCEEEEEC
Confidence 344555 66789999987 999999999999999999943
No 453
>PRK12320 hypothetical protein; Provisional
Probab=43.16 E-value=25 Score=41.18 Aligned_cols=30 Identities=23% Similarity=0.382 Sum_probs=27.2
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCcEEEeec
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~ 496 (533)
.|++||++ +.+|+.++..|.++|.+|..++
T Consensus 2 kILVTGAa--GFIGs~La~~Ll~~G~~Vi~ld 31 (699)
T PRK12320 2 QILVTDAT--GAVGRSVTRQLIAAGHTVSGIA 31 (699)
T ss_pred EEEEECCC--CHHHHHHHHHHHhCCCEEEEEe
Confidence 58999999 6999999999999999998844
No 454
>cd06215 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal portion of the FAD/NAD binding domain contains most of the NADP(H) binding residues and the N-terminal sub-domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. In this ferredoxin like sub-group, the FAD/NAD sub-domains is typically fused to a C-terminal iron-sulfur binding domain. Iron-sulfur pr
Probab=43.10 E-value=45 Score=32.23 Aligned_cols=52 Identities=25% Similarity=0.459 Sum_probs=35.3
Q ss_pred cCCCCceeEEeeCC-----------cchhhhhhhcC-Cc-CcceEEEeccccchhhHHHHHHHhhhcCcE
Q 009511 435 RQPNKLKIKVVDGS-----------SLAAAVVVNSL-PK-TTAHVLLRGTVTANKVANAVASSLCQMGIK 491 (533)
Q Consensus 435 ~~p~~l~vrvv~g~-----------~l~aa~v~~~i-p~-~~~~v~l~g~~~~~k~~~aia~~lc~~~~~ 491 (533)
++| ++++.++..+ .+++ .+++++ +. ...+|+++|.. .+-+++...|.+.|+.
T Consensus 158 ~~~-~~~~~~~~~~~~~~~~~~~~g~~~~-~~l~~~~~~~~~~~v~icGp~---~m~~~~~~~l~~~gv~ 222 (231)
T cd06215 158 RHP-NFRLHLILEQPAPGAWGGYRGRLNA-ELLALLVPDLKERTVFVCGPA---GFMKAVKSLLAELGFP 222 (231)
T ss_pred HCC-CeEEEEEEccCCCCcccccCCcCCH-HHHHHhcCCccCCeEEEECCH---HHHHHHHHHHHHcCCC
Confidence 567 7887765432 2333 344444 43 23589999999 7889999999998873
No 455
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=42.98 E-value=49 Score=34.28 Aligned_cols=41 Identities=24% Similarity=0.215 Sum_probs=29.7
Q ss_pred cceEEEeccccchhhHHHHHHHhhhcCcE-EEee--chhHHHHHhcc
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQMGIK-VATI--CKDDYEKLKLR 506 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~~~~-v~~~--~~~~~~~~~~~ 506 (533)
-|.|++.|+.. .|||||.+|.+.|++ |.+. +.|+=++|.++
T Consensus 127 ~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~ 170 (283)
T PRK14027 127 LDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADV 170 (283)
T ss_pred CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHH
Confidence 46899999984 599999999999984 5552 33555555443
No 456
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=42.33 E-value=21 Score=37.78 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=21.2
Q ss_pred eccccchhhHHHHHHHhhhcCcEEEeech
Q 009511 469 RGTVTANKVANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 469 ~g~~~~~k~~~aia~~lc~~~~~v~~~~~ 497 (533)
||+| =+..++|.+|-++|.||.++|+
T Consensus 48 TGKT---P~v~~L~~~L~~~G~~~~IlSR 73 (326)
T PF02606_consen 48 TGKT---PLVIWLARLLQARGYRPAILSR 73 (326)
T ss_pred CCch---HHHHHHHHHHHhcCCceEEEcC
Confidence 3555 5789999999999999999554
No 457
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=42.02 E-value=47 Score=30.00 Aligned_cols=38 Identities=24% Similarity=0.296 Sum_probs=30.2
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhcc
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~ 506 (533)
|.+.|+. =+|..+|-+|++.|.+|.+ .+.++++.++++
T Consensus 1 I~I~G~G---aiG~~~a~~L~~~g~~V~l~~r~~~~~~~~~~ 39 (151)
T PF02558_consen 1 ILIIGAG---AIGSLYAARLAQAGHDVTLVSRSPRLEAIKEQ 39 (151)
T ss_dssp EEEESTS---HHHHHHHHHHHHTTCEEEEEESHHHHHHHHHH
T ss_pred CEEECcC---HHHHHHHHHHHHCCCceEEEEccccHHhhhhe
Confidence 4566777 5899999999999999999 444458888765
No 458
>COG4869 PduL Propanediol utilization protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=41.86 E-value=37 Score=33.31 Aligned_cols=57 Identities=26% Similarity=0.386 Sum_probs=46.6
Q ss_pred hhhHHHHHHHhhhcCcEEEe------echhHHHHHhcc-CChhhcccceecccccccCceeeEe
Q 009511 475 NKVANAVASSLCQMGIKVAT------ICKDDYEKLKLR-IPVEAQHNLVLSTSYAAHKTVTMVT 531 (533)
Q Consensus 475 ~k~~~aia~~lc~~~~~v~~------~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~ 531 (533)
|++-...-....++||.|-+ +|+|+|+.|--. -|-...+-|.|...|.|-|+.++|.
T Consensus 8 s~irev~~~~~~e~~i~vgvSnRHvHLs~ed~e~LFgpg~~lt~~k~L~QPGqyaaketvtiVg 71 (210)
T COG4869 8 SLIREVTRRARLETGIPVGVSNRHVHLSREDYEALFGPGYELTHKKDLSQPGQYAAKETVTIVG 71 (210)
T ss_pred HHHHHHHHHHhhCcCceeeecCceEeecHHHHHHhcCCCCccchhhhhcCcchhhheeeEEEEc
Confidence 45655555666799998877 799999999844 7888888999999999999998873
No 459
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=41.72 E-value=33 Score=36.74 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=28.8
Q ss_pred hcCCc-CcceEEEeccccchhhHHHHHHHhhhcCcE-EEe
Q 009511 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT 494 (533)
Q Consensus 457 ~~ip~-~~~~v~l~g~~~~~k~~~aia~~lc~~~~~-v~~ 494 (533)
..++. +-+.|++.|+. ++|+.+|.+|.++|++ |.+
T Consensus 167 ~~~~~l~~k~vLvIGaG---em~~l~a~~L~~~g~~~i~v 203 (338)
T PRK00676 167 RRRQKSKKASLLFIGYS---EINRKVAYYLQRQGYSRITF 203 (338)
T ss_pred HHhCCccCCEEEEEccc---HHHHHHHHHHHHcCCCEEEE
Confidence 34432 67899999998 9999999999999976 655
No 460
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=41.64 E-value=15 Score=40.13 Aligned_cols=87 Identities=14% Similarity=0.100 Sum_probs=51.0
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCC-hhhcccce
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP-VEAQHNLV 516 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~-~~~~~~l~ 516 (533)
+=-+.+|+|+.-.+.--+-+ -++++-|.+||.+ .+|++|+....+++.+|.+ +.-..---+-+.+. +..-+.++
T Consensus 183 ~gvv~vv~g~~~~~~~~l~~-~~~v~~v~ftGs~---~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~daDld~aa~~iv 258 (462)
T PF00171_consen 183 PGVVNVVPGDGSEVGEALVS-HPDVDLVSFTGST---ATGRAIAKAAAKNLKPVVLELGGKNPVIVDPDADLDKAAEAIV 258 (462)
T ss_dssp TTSEEEECSSTHHHHHHHHH-TTTEEEEEEESEH---HHHHHHHHHHHTTTSEEEEEECEEEEEEE-TTSHHHHHHHHHH
T ss_pred cccccccccccccccceeee-ccccceeeecchh---hhhhhhhhhcccccccccccccccceeeEeccccccccccccc
Confidence 44456777753222111111 2378889999998 8999999998888899888 11000000011111 33344555
Q ss_pred ecccccccCceee
Q 009511 517 LSTSYAAHKTVTM 529 (533)
Q Consensus 517 ~~~~~~~~~~~~~ 529 (533)
.+..+.+||.|.-
T Consensus 259 ~~~~~~~GQ~C~a 271 (462)
T PF00171_consen 259 RGAFFNSGQSCTA 271 (462)
T ss_dssp HHHHGGGGTSTTS
T ss_pred chhcccccccccc
Confidence 6667788999853
No 461
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=41.48 E-value=27 Score=36.89 Aligned_cols=52 Identities=25% Similarity=0.364 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhcCCeEEEecccccccccccccceeeccCCCCceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhh
Q 009511 398 LIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKV 477 (533)
Q Consensus 398 ~ie~ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p~~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~ 477 (533)
+-+..++...+.+|.|||.|++. =|| ||+| =+
T Consensus 15 ~y~~~~~~~~~~~vPVIsVGNit------vGG---------------------------------------TGKT---P~ 46 (311)
T TIGR00682 15 LYDLGLKKAKRAPVPVVIVGNLS------VGG---------------------------------------TGKT---PV 46 (311)
T ss_pred HHHcCccccccCCCCEEEEeccc------cCC---------------------------------------cChH---HH
Confidence 34455666677888899988765 233 3555 47
Q ss_pred HHHHHHHhhhcCcEEEeech
Q 009511 478 ANAVASSLCQMGIKVATICK 497 (533)
Q Consensus 478 ~~aia~~lc~~~~~v~~~~~ 497 (533)
..++|.+|-++|.||.++|+
T Consensus 47 v~~La~~l~~~G~~~~IlSR 66 (311)
T TIGR00682 47 VVWLAELLKDRGLRVGVLSR 66 (311)
T ss_pred HHHHHHHHHHCCCEEEEECC
Confidence 89999999999999999664
No 462
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=41.28 E-value=24 Score=33.64 Aligned_cols=64 Identities=20% Similarity=0.318 Sum_probs=49.1
Q ss_pred EEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhc--CcEEEe-----echhHHHHHhccCCh
Q 009511 443 KVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQM--GIKVAT-----ICKDDYEKLKLRIPV 509 (533)
Q Consensus 443 rvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~--~~~v~~-----~~~~~~~~~~~~~~~ 509 (533)
.-|+|+.|+-++.= ...+.-+.|||.|++ ..+....+..|.++ |++|+- .++++.++|..++..
T Consensus 29 ~rv~g~dl~~~l~~-~~~~~~~~ifllG~~--~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~ 99 (172)
T PF03808_consen 29 ERVTGSDLFPDLLR-RAEQRGKRIFLLGGS--EEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINA 99 (172)
T ss_pred cccCHHHHHHHHHH-HHHHcCCeEEEEeCC--HHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHH
Confidence 66888888877655 455555699999999 59999999999977 899986 356777777766443
No 463
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=41.28 E-value=47 Score=36.76 Aligned_cols=48 Identities=15% Similarity=0.245 Sum_probs=33.5
Q ss_pred eEEeeCCcc-hhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 442 IKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 442 vrvv~g~~l-~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+|+|+.- +.+.++ + .++++-|.+||++ .+|+.|+....++..++.+
T Consensus 195 ~~~v~g~~~~~~~~l~-~-~~~v~~v~fTGs~---~~g~~i~~~aa~~~~~~~l 243 (475)
T cd07117 195 VNIVTGKGSKSGEYLL-N-HPGLDKLAFTGST---EVGRDVAIAAAKKLIPATL 243 (475)
T ss_pred EEEEecCcHHHHHHHh-c-CCCCCEEEEECcH---HHHHHHHHHHhccCCcEEE
Confidence 566666432 222222 2 3378889999998 8899999988888888776
No 464
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=41.25 E-value=49 Score=33.24 Aligned_cols=42 Identities=26% Similarity=0.313 Sum_probs=33.1
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhc
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~ 505 (533)
+.+.|++.|+. +=+|.+++..+.++|++|.. .++++.+.+++
T Consensus 146 ~~~~vlI~g~~--g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 189 (326)
T cd08289 146 EQGPVLVTGAT--GGVGSLAVSILAKLGYEVVASTGKADAADYLKK 189 (326)
T ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH
Confidence 34689999997 46999999999999999987 45667666643
No 465
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=40.92 E-value=46 Score=32.23 Aligned_cols=38 Identities=24% Similarity=0.257 Sum_probs=31.1
Q ss_pred EEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhcc
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~~ 506 (533)
|=.-|.. .||-..|..|+++|.+|+- .++++-++|++.
T Consensus 3 I~ViGlG---yvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g 42 (185)
T PF03721_consen 3 IAVIGLG---YVGLPLAAALAEKGHQVIGVDIDEEKVEALNNG 42 (185)
T ss_dssp EEEE--S---TTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTT
T ss_pred EEEECCC---cchHHHHHHHHhCCCEEEEEeCChHHHHHHhhc
Confidence 4445666 9999999999999999999 889999999987
No 466
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=40.69 E-value=52 Score=34.36 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=40.6
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCc-EEEeech-hHHHH-----HhccCChhh-cccceecccccccCceeeEee
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGI-KVATICK-DDYEK-----LKLRIPVEA-QHNLVLSTSYAAHKTVTMVTI 532 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~-~v~~~~~-~~~~~-----~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~ 532 (533)
+|-..|+. .+|..+|..|+++|. +|++.+. ++-.+ +....+.+. ..+|...+.|++.++|.+|.|
T Consensus 3 KV~VIGaG---~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~~~~aDiVIi 75 (305)
T TIGR01763 3 KISVIGAG---FVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYADTANSDIVVI 75 (305)
T ss_pred EEEEECcC---HHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHHhCCCCEEEE
Confidence 56778886 899999999999887 8888322 11111 111122221 123334468988889998865
No 467
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=40.57 E-value=47 Score=34.40 Aligned_cols=65 Identities=23% Similarity=0.304 Sum_probs=39.8
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCc--EEEeec--hhHHHHHhccC----ChhhcccceecccccccCceeeEee
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGI--KVATIC--KDDYEKLKLRI----PVEAQHNLVLSTSYAAHKTVTMVTI 532 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~--~v~~~~--~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~ 532 (533)
.|-+.|+. .+|+++|..|+++|+ +|.+.+ ++.-+.+..+. +.......+....|.+.+.|.+|.+
T Consensus 2 kI~IIGaG---~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi 74 (306)
T cd05291 2 KVVIIGAG---HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI 74 (306)
T ss_pred EEEEECCC---HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence 57888976 899999999999995 566633 33322222221 1111111234456777788888764
No 468
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=40.30 E-value=47 Score=36.17 Aligned_cols=50 Identities=14% Similarity=0.170 Sum_probs=29.4
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
-+.+|+|+.-.+.--|-+-| +++-|++||.+ .+|+.|+....+.+.+|.+
T Consensus 176 ~v~~v~g~~~~~~~~L~~~~-~i~~V~ftGs~---~~g~~v~~~aa~~~~~~~l 225 (455)
T cd07093 176 VVNVVHGFGPEAGAALVAHP-DVDLISFTGET---ATGRTIMRAAAPNLKPVSL 225 (455)
T ss_pred ceEEEecCchHHHHHHhcCC-CccEEEEECCH---HHHHHHHHHHhhcccceEe
Confidence 35556654322222222222 56777888876 7778887777677777666
No 469
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=39.97 E-value=74 Score=29.32 Aligned_cols=66 Identities=26% Similarity=0.319 Sum_probs=41.3
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCc--EEEe--echhHHHHHhcc---CChhh-cccceecccccccCceeeEee
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLR---IPVEA-QHNLVLSTSYAAHKTVTMVTI 532 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~--~v~~--~~~~~~~~~~~~---~~~~~-~~~l~~~~~~~~~~~~~~~~~ 532 (533)
+|-+.|+. +.||.++|..|+++|+ ++.+ .+++.-+....+ +...+ .+..+-...|.+-++|.+|.|
T Consensus 2 KV~IiGa~--G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvi 75 (141)
T PF00056_consen 2 KVAIIGAA--GNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVI 75 (141)
T ss_dssp EEEEESTT--SHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEE
T ss_pred EEEEECCC--ChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEE
Confidence 57789997 5999999999998876 3444 333333322222 22222 222223347999999999876
No 470
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=39.81 E-value=31 Score=39.42 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=28.4
Q ss_pred cceEEEeccccchhhHHHHHHHhhhc--CcEEEeech
Q 009511 463 TAHVLLRGTVTANKVANAVASSLCQM--GIKVATICK 497 (533)
Q Consensus 463 ~~~v~l~g~~~~~k~~~aia~~lc~~--~~~v~~~~~ 497 (533)
.+.|++||++ +=||++++.+|.++ |++|+.+++
T Consensus 6 ~~~VLVTGat--GfIG~~lv~~Ll~~g~~~~V~~~d~ 40 (668)
T PLN02260 6 PKNILITGAA--GFIASHVANRLIRNYPDYKIVVLDK 40 (668)
T ss_pred CCEEEEECCC--cHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 4789999999 69999999999988 788887543
No 471
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=39.43 E-value=43 Score=31.95 Aligned_cols=36 Identities=31% Similarity=0.401 Sum_probs=28.6
Q ss_pred EEEeccccchh--hHHHHHHHhhhcCcEEEeechhHHH
Q 009511 466 VLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYE 501 (533)
Q Consensus 466 v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~~~~~~ 501 (533)
|.+||-..++| +|+++...|.++|++|.+++-|...
T Consensus 5 IwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD~lR 42 (156)
T PF01583_consen 5 IWLTGLSGSGKTTLARALERRLFARGIKVYLLDGDNLR 42 (156)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCcchh
Confidence 67888776667 9999999999999999996655544
No 472
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=39.32 E-value=30 Score=38.25 Aligned_cols=50 Identities=22% Similarity=0.215 Sum_probs=32.7
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhh-cCcEEEe
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT 494 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~-~~~~v~~ 494 (533)
-+.+|.|+.-.+.-.|-+ -++++-|.+||++ .+|+.|+....+ ...+|.+
T Consensus 203 ~v~~v~g~~~~~~~~L~~-~~~vd~V~fTGs~---~~G~~i~~~aa~~~~~~~~l 253 (481)
T cd07143 203 VINVVSGYGRTCGNAISS-HMDIDKVAFTGST---LVGRKVMEAAAKSNLKKVTL 253 (481)
T ss_pred cEEEEeCCchhHHHHHhc-CCCCCEEEEECch---HHHHHHHHHHHHhcCCEEEe
Confidence 366777754322222222 2467889999998 899999988764 4556666
No 473
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=39.12 E-value=28 Score=35.19 Aligned_cols=38 Identities=26% Similarity=0.378 Sum_probs=28.2
Q ss_pred EEEeccccchh--hHHHHHHHhhhcCcEEEeechhHHHHH
Q 009511 466 VLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYEKL 503 (533)
Q Consensus 466 v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~~~~~~~~ 503 (533)
++++|+...+| ++.++|.+++++|.||++++.|--.++
T Consensus 3 ~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~~sl 42 (254)
T cd00550 3 IFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPAHSL 42 (254)
T ss_pred EEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCcccH
Confidence 57777765556 788899999999999999655443333
No 474
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=38.97 E-value=87 Score=32.86 Aligned_cols=94 Identities=23% Similarity=0.350 Sum_probs=66.8
Q ss_pred HHhcCCeEEEec----cccccccc-------ccccceeeccCCC---------CceeEEeeCCc--------ch-hhhhh
Q 009511 406 ADAKGVKVISLG----LLNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS--------LA-AAVVV 456 (533)
Q Consensus 406 a~~~g~kv~slg----~ln~~~~l-------n~~g~l~~~~~p~---------~l~vrvv~g~~--------l~-aa~v~ 456 (533)
|.+.|.+|+.|. -++|+|.+ ++++-+.|-|||. ..+|=|+++.+ |+ ...+.
T Consensus 61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~ 140 (304)
T TIGR00658 61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII 140 (304)
T ss_pred HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence 456999999885 45777764 6677888889983 35677888644 11 12233
Q ss_pred hcCCc-CcceEEEeccccchhhHHHHHHHhhhcCcEEEeechhHHH
Q 009511 457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE 501 (533)
Q Consensus 457 ~~ip~-~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~ 501 (533)
+..+. +-..|-..|.. +.+++..+..|.+-|++|.+.+.+.|+
T Consensus 141 e~~g~l~g~~v~~vGd~--~~v~~Sl~~~l~~~g~~v~~~~P~~~~ 184 (304)
T TIGR00658 141 EHFGKLKGVKVVYVGDG--NNVCNSLMLAGAKLGMDVVVATPEGYE 184 (304)
T ss_pred HHhCCCCCcEEEEEeCC--CchHHHHHHHHHHcCCEEEEECCchhc
Confidence 44442 22367788998 589999999999999999997777664
No 475
>COG4170 SapD ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=38.76 E-value=28 Score=35.64 Aligned_cols=81 Identities=16% Similarity=0.229 Sum_probs=53.3
Q ss_pred CCCCceeEEeeCCcchhhhhhhcCCcCcceEEEeccccc--hhhHHHHHHHhhhcCcEEEeechhHHHHHhcc-CChhhc
Q 009511 436 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTA--NKVANAVASSLCQMGIKVATICKDDYEKLKLR-IPVEAQ 512 (533)
Q Consensus 436 ~p~~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~--~k~~~aia~~lc~~~~~v~~~~~~~~~~~~~~-~~~~~~ 512 (533)
-| +=+||+||+-+||- || |-- -=|.|.... |-++.|||. .|+-+-+|.- ++-||+.|..- .++..+
T Consensus 15 Ts-qG~vK~VD~v~ltl----nE---GEi-~GLVGESGSGKSLiAK~Ic~-v~kdnW~vTA-DR~Rf~~idLL~L~Pr~R 83 (330)
T COG4170 15 TS-QGWVKAVDRVSMTL----NE---GEI-RGLVGESGSGKSLIAKAICG-VNKDNWRVTA-DRMRFDDIDLLRLSPRER 83 (330)
T ss_pred cC-CCceEeeeeeeeee----cc---cee-eeeeccCCCchhHHHHHHhc-ccccceEEEh-hhcccccchhhcCChHHh
Confidence 35 67899999999872 32 111 123343321 235555554 4588999998 88888888765 777777
Q ss_pred ccce-e-cc-cccccCce
Q 009511 513 HNLV-L-ST-SYAAHKTV 527 (533)
Q Consensus 513 ~~l~-~-~~-~~~~~~~~ 527 (533)
..|+ + +. -||+-++|
T Consensus 84 Rk~ig~~isMIFQeP~sC 101 (330)
T COG4170 84 RKLVGHNVSMIFQEPQSC 101 (330)
T ss_pred hhhhccchhhhhcCchhh
Confidence 7777 4 33 68988888
No 476
>cd03506 Delta6-FADS-like The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; an
Probab=38.74 E-value=1.3e+02 Score=29.08 Aligned_cols=14 Identities=21% Similarity=0.373 Sum_probs=10.0
Q ss_pred hhhccccCCccCcc
Q 009511 155 LYSRYHSHHHSSVV 168 (533)
Q Consensus 155 LY~r~HkvHHss~~ 168 (533)
.++.-|..||..++
T Consensus 50 ~w~~~H~~HH~~tn 63 (204)
T cd03506 50 WWKNKHNVHHAYTN 63 (204)
T ss_pred HHHHHHhhhcCcCC
Confidence 45567888888865
No 477
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=38.71 E-value=27 Score=39.10 Aligned_cols=85 Identities=13% Similarity=0.127 Sum_probs=45.7
Q ss_pred eeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhc---CcEEEe-echhHHHHHhccCChh-hcccc
Q 009511 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQM---GIKVAT-ICKDDYEKLKLRIPVE-AQHNL 515 (533)
Q Consensus 441 ~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~---~~~v~~-~~~~~~~~~~~~~~~~-~~~~l 515 (533)
-+.+|+|+.-.++..+-+ .++++-|++||.+ ++|++|+....++ -++|++ +.-..--=+-+.+.-| ..+.+
T Consensus 226 vv~vv~g~~~~~~~~L~~-~~~vd~V~ftGs~---~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i 301 (518)
T cd07125 226 VLQLVPGDGEEIGEALVA-HPRIDGVIFTGST---ETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDV 301 (518)
T ss_pred cEEEEecCchhhHHHHhc-CCCcCEEEEECCH---HHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHH
Confidence 366777765322222211 2478889999988 8999999886655 456666 1100000000112222 22334
Q ss_pred eecccccccCceee
Q 009511 516 VLSTSYAAHKTVTM 529 (533)
Q Consensus 516 ~~~~~~~~~~~~~~ 529 (533)
+...-+.+||.|.-
T Consensus 302 v~g~f~nsGQ~C~a 315 (518)
T cd07125 302 VQSAFGSAGQRCSA 315 (518)
T ss_pred HHHHHhcCCCCCCC
Confidence 45555668888864
No 478
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=38.67 E-value=45 Score=34.45 Aligned_cols=30 Identities=13% Similarity=0.235 Sum_probs=26.0
Q ss_pred ceEEEeccccchhhHHHHHHHhhhc-CcEEEee
Q 009511 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVATI 495 (533)
Q Consensus 464 ~~v~l~g~~~~~k~~~aia~~lc~~-~~~v~~~ 495 (533)
+.|++||++ +=+|+.++..|.++ |.+|..+
T Consensus 2 ~~ilVtGat--GfiGs~l~~~L~~~~~~~V~~~ 32 (347)
T PRK11908 2 KKVLILGVN--GFIGHHLSKRILETTDWEVYGM 32 (347)
T ss_pred cEEEEECCC--cHHHHHHHHHHHhCCCCeEEEE
Confidence 469999999 69999999999876 6898873
No 479
>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin. This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.
Probab=38.65 E-value=62 Score=27.01 Aligned_cols=47 Identities=15% Similarity=0.209 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhcCCeEEEecccccccccccccceeeccCCCCceeEEeeCC
Q 009511 397 SLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGS 448 (533)
Q Consensus 397 ~~ie~ai~~a~~~g~kv~slg~ln~~~~ln~~g~l~~~~~p~~l~vrvv~g~ 448 (533)
..++++..++.+.|+++.. .....-++|.-+.-++|++.++.+..|+
T Consensus 66 ~d~~~~~~~l~~~G~~~~~-----~~~~~~~~~~~~~~~DPdG~~iEi~~~~ 112 (113)
T cd08345 66 EEFDEYTERLKALGVEMKP-----ERPRVQGEGRSIYFYDPDGHLLELHAGT 112 (113)
T ss_pred HHHHHHHHHHHHcCCccCC-----CccccCCCceEEEEECCCCCEEEEEeCc
Confidence 4678888899999999852 1122234677777799988888888775
No 480
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=38.60 E-value=55 Score=36.62 Aligned_cols=52 Identities=19% Similarity=0.270 Sum_probs=35.0
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcC---cEEEe
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG---IKVAT 494 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~---~~v~~ 494 (533)
+=-+.+|.|..-.+.-.|-+- ++++-|.+||.+ ++|+.|+..+.++. .+|.+
T Consensus 217 ~gvv~~v~g~~~~~~~~l~~~-~~v~~V~ftGs~---~~g~~v~~~aa~~~~~~~~v~l 271 (500)
T TIGR01238 217 AGTIQLLPGRGADVGAALTSD-PRIAGVAFTGST---EVAQLINQTLAQREDAPVPLIA 271 (500)
T ss_pred CCceEEEecCcchHHHHHhcC-CCcCeEEEECCH---HHHHHHHHHHhhcccCCceEEE
Confidence 334677777543222222222 368889999999 89999999888765 67765
No 481
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=38.59 E-value=26 Score=35.10 Aligned_cols=27 Identities=15% Similarity=0.405 Sum_probs=24.0
Q ss_pred EEEeccccchhhHHHHHHHhhhcCc-EEEe
Q 009511 466 VLLRGTVTANKVANAVASSLCQMGI-KVAT 494 (533)
Q Consensus 466 v~l~g~~~~~k~~~aia~~lc~~~~-~v~~ 494 (533)
|++||++ +=||+++|..|.++|. .|..
T Consensus 1 ilItGat--G~iG~~l~~~L~~~g~~~v~~ 28 (314)
T TIGR02197 1 IIVTGGA--GFIGSNLVKALNERGITDILV 28 (314)
T ss_pred CEEeCCc--chhhHHHHHHHHHcCCceEEE
Confidence 6899999 5799999999999997 5766
No 482
>PRK09183 transposase/IS protein; Provisional
Probab=38.58 E-value=45 Score=33.91 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=28.0
Q ss_pred ceEEEeccccchh--hHHHHHHHhhhcCcEEEeec
Q 009511 464 AHVLLRGTVTANK--VANAVASSLCQMGIKVATIC 496 (533)
Q Consensus 464 ~~v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~ 496 (533)
.-|+++|.+..+| ++.||+..+|++|.+|..++
T Consensus 103 ~~v~l~Gp~GtGKThLa~al~~~a~~~G~~v~~~~ 137 (259)
T PRK09183 103 ENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTT 137 (259)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 4588999887778 89999999999999998744
No 483
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=38.57 E-value=48 Score=29.65 Aligned_cols=40 Identities=28% Similarity=0.343 Sum_probs=29.3
Q ss_pred EEEeccccchh--hHHHHHHHhhhcCcEEEeechhHHHHHhcc
Q 009511 466 VLLRGTVTANK--VANAVASSLCQMGIKVATICKDDYEKLKLR 506 (533)
Q Consensus 466 v~l~g~~~~~k--~~~aia~~lc~~~~~v~~~~~~~~~~~~~~ 506 (533)
+.++|+...+| ++..+|.+|.++|.+|++++.|. +++-++
T Consensus 2 i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~D~-~~~~~~ 43 (116)
T cd02034 2 IAITGKGGVGKTTIAALLARYLAEKGKPVLAIDADP-DDLPER 43 (116)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEECCc-hhhHHH
Confidence 56777665556 78889999999999999866665 444333
No 484
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=38.42 E-value=30 Score=38.14 Aligned_cols=48 Identities=19% Similarity=0.312 Sum_probs=32.7
Q ss_pred eEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 442 vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+|.|+.=++..++ +-| +++.|.+||++ .+|+.|+....+.+.+|.+
T Consensus 196 ~~~v~g~~~~~~~L~-~~~-~v~~V~ftGS~---~~g~~v~~~a~~~~~~v~l 243 (477)
T TIGR01722 196 LNVVHGDKEAVDRLL-EHP-DVKAVSFVGST---PIGRYIHTTGSAHGKRVQA 243 (477)
T ss_pred EEEEeCCHHHHHHHH-cCC-CcCEEEEECCH---HHHHHHHHHHHhcCCeEEE
Confidence 667776532333322 333 48899999998 8899998875567777777
No 485
>COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism]
Probab=38.41 E-value=36 Score=34.42 Aligned_cols=32 Identities=38% Similarity=0.432 Sum_probs=25.1
Q ss_pred cceEEEecccc-chh--hHHHHHHHhhhcCcEEEe
Q 009511 463 TAHVLLRGTVT-ANK--VANAVASSLCQMGIKVAT 494 (533)
Q Consensus 463 ~~~v~l~g~~~-~~k--~~~aia~~lc~~~~~v~~ 494 (533)
.+.+|.||.-| .+| +.+|+|.+||++|++|..
T Consensus 2 ~~~~fVtGTDT~VGKTv~S~aL~~~l~~~g~~~~~ 36 (223)
T COG0132 2 MKRFFVTGTDTGVGKTVVSAALAQALKQQGYSVAG 36 (223)
T ss_pred CceEEEEeCCCCccHHHHHHHHHHHHHhCCCeeEE
Confidence 46788988643 234 678899999999999987
No 486
>cd06216 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to for
Probab=38.31 E-value=50 Score=32.46 Aligned_cols=61 Identities=18% Similarity=0.334 Sum_probs=39.9
Q ss_pred cCCCCceeEEeeC-----CcchhhhhhhcCCc-CcceEEEeccccchhhHHHHHHHhhhcCcEEEeechhHH
Q 009511 435 RQPNKLKIKVVDG-----SSLAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY 500 (533)
Q Consensus 435 ~~p~~l~vrvv~g-----~~l~aa~v~~~ip~-~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~~~ 500 (533)
++| ++++.++.. ..++.+.+-+.+|. +..+|+++|.. .+-+++...|-++|+. --++.|+|
T Consensus 177 ~~~-~~~~~~~~s~~~~~g~~~~~~l~~~~~~~~~~~vyvcGp~---~m~~~~~~~l~~~Gv~-~~i~~e~F 243 (243)
T cd06216 177 QHP-NLRLHLLYTREELDGRLSAAHLDAVVPDLADRQVYACGPP---GFLDAAEELLEAAGLA-DRLHTERF 243 (243)
T ss_pred hCC-CeEEEEEEcCCccCCCCCHHHHHHhccCcccCeEEEECCH---HHHHHHHHHHHHCCCc-cceeeccC
Confidence 456 666654432 12444444444453 34599999999 8889999999999997 43455554
No 487
>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]
Probab=38.13 E-value=11 Score=39.75 Aligned_cols=95 Identities=22% Similarity=0.330 Sum_probs=65.1
Q ss_pred EEEecccccccccccc--cceeeccCCCCceeEEeeCCcchhhhhhhcCCc-CcceEEEeccccchhhHHHHHHHhhh-c
Q 009511 413 VISLGLLNQGEELNRN--GEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQ-M 488 (533)
Q Consensus 413 v~slg~ln~~~~ln~~--g~l~~~~~p~~l~vrvv~g~~l~aa~v~~~ip~-~~~~v~l~g~~~~~k~~~aia~~lc~-~ 488 (533)
++-||.. .-||++. |==|-+-.| |..|.=-...++||=|+|+.++ +...||-.-.. -|.++-||.+.|+ |
T Consensus 101 L~DLGVS--S~QLD~~eRGFSf~~d~p--LDMRMd~~~~lsA~evvN~~~e~~L~~I~~~yGE--Er~arrIA~aIv~~R 174 (314)
T COG0275 101 LLDLGVS--SPQLDDAERGFSFRKDGP--LDMRMDQTQGLSAAEVVNTYSEEDLARIFKEYGE--ERFAKRIARAIVERR 174 (314)
T ss_pred EEeccCC--ccccCCCcCCcccCCCCC--cccCcCCCCCCCHHHHHhcCCHHHHHHHHHHhcc--HhhHHHHHHHHHHHh
Confidence 3445543 2344433 444444456 7777766999999999999997 88899998666 4999999999995 5
Q ss_pred CcEEEeechhHHHHHhccCChhhcc
Q 009511 489 GIKVATICKDDYEKLKLRIPVEAQH 513 (533)
Q Consensus 489 ~~~v~~~~~~~~~~~~~~~~~~~~~ 513 (533)
..+=.-+.+|--+-|++-+|.....
T Consensus 175 ~~~pi~tT~eLaeiI~~~~p~~~~~ 199 (314)
T COG0275 175 KKKPIETTKELAEIIKSAIPAKEKR 199 (314)
T ss_pred ccCCCccHHHHHHHHHHhCCchhcc
Confidence 5444443456666666668854433
No 488
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=38.02 E-value=29 Score=38.88 Aligned_cols=23 Identities=26% Similarity=0.354 Sum_probs=20.5
Q ss_pred cchhhHHHHHHHhhhcCcEEEee
Q 009511 473 TANKVANAVASSLCQMGIKVATI 495 (533)
Q Consensus 473 ~~~k~~~aia~~lc~~~~~v~~~ 495 (533)
|-+|.|+|||.++.+||-+|..+
T Consensus 280 SSGkmG~alA~aa~~~GA~VtlI 302 (475)
T PRK13982 280 SSGKQGFAIAAAAAAAGAEVTLI 302 (475)
T ss_pred CchHHHHHHHHHHHHCCCcEEEE
Confidence 33799999999999999999883
No 489
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=37.93 E-value=29 Score=37.65 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=27.0
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
++++-|.+||++ ++|+.|+...+++..+|.+
T Consensus 149 ~~v~~V~ftGs~---~~g~~v~~~aa~~~~~~~l 179 (409)
T PRK10090 149 PKVAMVSMTGSV---SAGEKIMAAAAKNITKVCL 179 (409)
T ss_pred CCcCEEEEECCH---HHHHHHHHHHHhcCCeEEE
Confidence 477889999998 9999999988888888877
No 490
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=37.91 E-value=23 Score=39.61 Aligned_cols=30 Identities=20% Similarity=0.060 Sum_probs=25.4
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+++-|.+||++ .+|+.|+...+++-.+|.+
T Consensus 236 ~v~~v~fTGS~---~~G~~v~~~aa~~~~~~~l 265 (508)
T PLN02315 236 RIPLVSFTGSS---KVGLMVQQTVNARFGKCLL 265 (508)
T ss_pred CCCEEEEECCH---HHHHHHHHHHHhcCCCEEE
Confidence 66789999999 8999999988777677777
No 491
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=37.88 E-value=35 Score=37.95 Aligned_cols=87 Identities=10% Similarity=0.035 Sum_probs=46.6
Q ss_pred CceeEEeeCCcchhhhhhhcCCcCcceEEEeccccchhhHHHHHHHhhh-cCcEEEe-echhHHHHHhccCChhh-cccc
Q 009511 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT-ICKDDYEKLKLRIPVEA-QHNL 515 (533)
Q Consensus 439 ~l~vrvv~g~~l~aa~v~~~ip~~~~~v~l~g~~~~~k~~~aia~~lc~-~~~~v~~-~~~~~~~~~~~~~~~~~-~~~l 515 (533)
+=-+.+|.|+.-.+.-.|-+ .++++-|.+||++ .+|++|+....+ +..+|.+ +.-...--+-+.+..|. .+.+
T Consensus 204 ~gv~~~v~g~~~~~~~~L~~-~~~v~~v~ftGs~---~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i 279 (486)
T cd07140 204 KGVINILPGSGSLVGQRLSD-HPDVRKLGFTGST---PIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMG 279 (486)
T ss_pred CCcEEEEecCchHHHHHHhc-CCCCCEEEEECcH---HHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHH
Confidence 34455666643322211111 3478899999999 899999988765 5677777 11111000111122222 2233
Q ss_pred eecccccccCceee
Q 009511 516 VLSTSYAAHKTVTM 529 (533)
Q Consensus 516 ~~~~~~~~~~~~~~ 529 (533)
+...-+.+||.|.-
T Consensus 280 ~~~~~~~~GQ~C~a 293 (486)
T cd07140 280 MSSVFFNKGENCIA 293 (486)
T ss_pred HHHHHhccCCCCCC
Confidence 34444578999964
No 492
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=37.87 E-value=41 Score=30.24 Aligned_cols=28 Identities=18% Similarity=0.376 Sum_probs=24.9
Q ss_pred eEEEeccccchhhHHHHHHHhhh-cCcEEEe
Q 009511 465 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT 494 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~-~~~~v~~ 494 (533)
.|.+.|.+ .|+|++|+..+-+ +|.++.-
T Consensus 2 rV~i~G~~--GrMG~~i~~~i~~~~~~~lv~ 30 (124)
T PF01113_consen 2 RVGIVGAS--GRMGRAIAEAILESPGFELVG 30 (124)
T ss_dssp EEEEETTT--SHHHHHHHHHHHHSTTEEEEE
T ss_pred EEEEECCC--CHHHHHHHHHHHhcCCcEEEE
Confidence 47899998 6999999999997 9999877
No 493
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=37.82 E-value=28 Score=38.24 Aligned_cols=30 Identities=23% Similarity=0.103 Sum_probs=24.4
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
+.+-|.+||++ ++|++|+.+..++..+|++
T Consensus 201 ~i~~V~fTGs~---~~G~~i~~~a~~~~~~~~l 230 (457)
T PRK09406 201 RVAAATLTGSE---PAGRAVAAIAGDEIKKTVL 230 (457)
T ss_pred CcCEEEEECcH---HHHHHHHHHHHhcCCceee
Confidence 57788999999 8999998876677777766
No 494
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=37.44 E-value=43 Score=38.27 Aligned_cols=41 Identities=7% Similarity=0.142 Sum_probs=34.7
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhcCcEEEe--echhHHHHHhc
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~--~~~~~~~~~~~ 505 (533)
..++|.++|.. ++|+.+|..|-++|++|++ .++|+-+.+++
T Consensus 399 ~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~ 441 (601)
T PRK03659 399 DKPQVIIVGFG---RFGQVIGRLLMANKMRITVLERDISAVNLMRK 441 (601)
T ss_pred ccCCEEEecCc---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh
Confidence 34689999988 9999999999999999999 66677776654
No 495
>PLN02278 succinic semialdehyde dehydrogenase
Probab=37.24 E-value=32 Score=38.32 Aligned_cols=66 Identities=9% Similarity=0.042 Sum_probs=39.7
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe-echhHHHHHhccCChh-hcccceecccccccCceee
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLSTSYAAHKTVTM 529 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 529 (533)
++++-|.+||++ .+|+.|+....+...+|.+ +.-..---+-+.+.-| ..+.++...-+.+||.|.-
T Consensus 238 ~~v~~V~fTGS~---~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a 305 (498)
T PLN02278 238 PKVRKITFTGST---AVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVC 305 (498)
T ss_pred CCcCEEEEECcH---HHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcC
Confidence 478889999998 8999999887777667766 1100000001112222 2344445555678898874
No 496
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=37.23 E-value=22 Score=38.66 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=23.7
Q ss_pred CcceEEEeccccchhhHHHHHHHhhhc-CcEEEe
Q 009511 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (533)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~aia~~lc~~-~~~v~~ 494 (533)
+++-|.+||.+ ++|+.|+.+.+++ +.+|.+
T Consensus 175 ~v~~v~ftGs~---~~g~~i~~~~a~~~~~~~~l 205 (431)
T cd07095 175 GIDGLLFTGSA---ATGLLLHRQFAGRPGKILAL 205 (431)
T ss_pred CCCEEEEECcH---HHHHHHHHHhhccCCCcEEE
Confidence 67788999998 8899999988754 466665
No 497
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=37.18 E-value=35 Score=36.00 Aligned_cols=65 Identities=17% Similarity=0.243 Sum_probs=38.7
Q ss_pred eEEEeccccchhhHHHHHHHhhhcCc-------EEEeechhH-HHHHhccCChhh-------cccceeccc-ccccCcee
Q 009511 465 HVLLRGTVTANKVANAVASSLCQMGI-------KVATICKDD-YEKLKLRIPVEA-------QHNLVLSTS-YAAHKTVT 528 (533)
Q Consensus 465 ~v~l~g~~~~~k~~~aia~~lc~~~~-------~v~~~~~~~-~~~~~~~~~~~~-------~~~l~~~~~-~~~~~~~~ 528 (533)
.|.+||++ +.||+++|..|+.+|+ +|.+++..+ =++++.++ -|. ..++.-.+. |++-+.|.
T Consensus 4 kV~I~GAa--G~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~-~Dl~d~~~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 4 RVLVTGAA--GQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVV-MELQDCAFPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred EEEEECCC--CHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcccccccee-eehhhccccccCCceecCCHHHHhCCCC
Confidence 48999998 5999999999998664 677743321 11122211 111 112211234 57778888
Q ss_pred eEee
Q 009511 529 MVTI 532 (533)
Q Consensus 529 ~~~~ 532 (533)
+|.+
T Consensus 81 iVI~ 84 (325)
T cd01336 81 VAIL 84 (325)
T ss_pred EEEE
Confidence 8865
No 498
>PRK13912 nuclease NucT; Provisional
Probab=37.01 E-value=1.3e+02 Score=28.64 Aligned_cols=101 Identities=19% Similarity=0.211 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhcCCeEEEeccccccccccccc--ceeeccCCCCceeEEeeCCcchhhhhhhcC-Cc---CcceEEEec
Q 009511 397 SLIEEAILEADAKGVKVISLGLLNQGEELNRNG--EIYLERQPNKLKIKVVDGSSLAAAVVVNSL-PK---TTAHVLLRG 470 (533)
Q Consensus 397 ~~ie~ai~~a~~~g~kv~slg~ln~~~~ln~~g--~l~~~~~p~~l~vrvv~g~~l~aa~v~~~i-p~---~~~~v~l~g 470 (533)
+-|-+|+.+|-++||+|==+- ......|... .-|..+.| +.+++..+|......--.+.+ -| =..++.++|
T Consensus 59 ~~i~~aL~~Aa~RGV~VrIll--d~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~H~K~~viD~~~~~iG 135 (177)
T PRK13912 59 KDIAKALKSAAKRGVKISIIY--DYESNHNNDQSTIGYLDKYP-NIKVCLLKGLKAKNGKYYGIMHQKVAIIDDKIVVLG 135 (177)
T ss_pred HHHHHHHHHHHHCCCEEEEEE--eCccccCcchhHHHHHHhCC-CceEEEecCccccCcccccccceeEEEEcCCEEEEe
Confidence 457888888999999986553 2111111111 12566777 788777776532111000001 11 013678888
Q ss_pred cccchhhHHHHHHHhhhcCcEEEeechhHHHHHhc
Q 009511 471 TVTANKVANAVASSLCQMGIKVATICKDDYEKLKL 505 (533)
Q Consensus 471 ~~~~~k~~~aia~~lc~~~~~v~~~~~~~~~~~~~ 505 (533)
+.|.++-+ . -..++.-+++.+++-.+++++
T Consensus 136 S~N~t~~s--~---~~N~E~~lii~d~~~~~~~~~ 165 (177)
T PRK13912 136 SANWSKNA--F---ENNYEVLLITDDTETILKAKE 165 (177)
T ss_pred CCCCChhH--h---ccCCceEEEECCHHHHHHHHH
Confidence 88755421 1 224555555556665565554
No 499
>cd01015 CSHase N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.
Probab=36.96 E-value=3.6e+02 Score=25.41 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=28.7
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEe
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~ 494 (533)
.|.++|.++|-.+ +--=.+.|..++++|++|.+
T Consensus 112 ~gi~~vvi~G~~t-~~CV~~Ta~~A~~~Gy~v~v 144 (179)
T cd01015 112 RGVDTLIVAGCST-SGCIRATAVDAMQHGFRPIV 144 (179)
T ss_pred cCCCEEEEeeecc-cHhHHHHHHHHHHCCCeEEE
Confidence 4889999999887 56667888999999999999
No 500
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=36.85 E-value=42 Score=35.35 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=29.8
Q ss_pred cCcceEEEeccccchhhHHHHHHHhhhcCcEEEeechh
Q 009511 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 498 (533)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~aia~~lc~~~~~v~~~~~~ 498 (533)
+...+|...|+. =.|-+.|..|.|+|++|+++.+.
T Consensus 4 ~~~~dV~IvGaG---~aGl~~A~~La~~G~~v~liE~~ 38 (392)
T PRK08773 4 RSRRDAVIVGGG---VVGAACALALADAGLSVALVEGR 38 (392)
T ss_pred CCCCCEEEECcC---HHHHHHHHHHhcCCCEEEEEeCC
Confidence 455689999998 78999999999999999995543
Done!