Query 009516
Match_columns 533
No_of_seqs 265 out of 1996
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 06:57:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1E-113 3E-118 920.2 55.2 472 54-529 6-483 (490)
2 3ifg_A Succinate-semialdehyde 100.0 5E-111 2E-115 900.3 55.9 474 52-528 10-483 (484)
3 3ek1_A Aldehyde dehydrogenase; 100.0 1E-109 3E-114 893.0 56.0 471 53-528 31-501 (504)
4 3ed6_A Betaine aldehyde dehydr 100.0 7E-109 2E-113 889.5 57.7 474 53-529 31-510 (520)
5 3rh9_A Succinate-semialdehyde 100.0 9E-109 3E-113 886.0 56.0 472 54-529 11-484 (506)
6 4f3x_A Putative aldehyde dehyd 100.0 1E-108 3E-113 884.7 53.3 471 53-528 24-496 (498)
7 3jz4_A Succinate-semialdehyde 100.0 7E-108 3E-112 877.1 59.6 473 54-529 9-481 (481)
8 2o2p_A Formyltetrahydrofolate 100.0 4E-108 1E-112 883.0 55.7 471 55-528 37-516 (517)
9 3k2w_A Betaine-aldehyde dehydr 100.0 5E-108 2E-112 880.7 55.0 473 54-529 12-488 (497)
10 3u4j_A NAD-dependent aldehyde 100.0 1E-107 4E-112 881.2 57.3 471 55-528 23-497 (528)
11 3iwj_A Putative aminoaldehyde 100.0 3E-107 1E-111 875.6 59.3 472 54-528 7-488 (503)
12 3prl_A NADP-dependent glyceral 100.0 6E-107 2E-111 872.2 57.9 468 53-529 10-483 (505)
13 3i44_A Aldehyde dehydrogenase; 100.0 7E-107 2E-111 870.3 57.4 466 55-527 26-496 (497)
14 1a4s_A ALDH, betaine aldehyde 100.0 4E-107 1E-111 873.8 54.8 470 55-529 20-496 (503)
15 1bxs_A Aldehyde dehydrogenase; 100.0 1E-106 5E-111 868.8 58.2 471 55-529 21-496 (501)
16 2imp_A Lactaldehyde dehydrogen 100.0 1E-106 4E-111 867.6 57.2 472 54-528 6-478 (479)
17 2d4e_A 5-carboxymethyl-2-hydro 100.0 1E-106 5E-111 872.1 58.1 471 55-529 27-505 (515)
18 1wnd_A Putative betaine aldehy 100.0 1E-106 5E-111 867.3 55.5 470 53-528 22-494 (495)
19 1o04_A Aldehyde dehydrogenase, 100.0 1E-106 4E-111 869.2 54.4 470 56-529 21-495 (500)
20 4e4g_A Methylmalonate-semialde 100.0 1E-106 4E-111 872.2 54.9 472 54-529 26-505 (521)
21 3r31_A BADH, betaine aldehyde 100.0 7E-107 2E-111 873.6 51.4 468 54-529 14-488 (517)
22 3b4w_A Aldehyde dehydrogenase; 100.0 1E-106 4E-111 869.0 52.4 469 55-529 9-482 (495)
23 3qan_A 1-pyrroline-5-carboxyla 100.0 7E-106 3E-110 869.3 58.4 470 53-529 36-516 (538)
24 2w8n_A Succinate-semialdehyde 100.0 8E-106 3E-110 861.5 53.3 469 55-529 13-486 (487)
25 2ve5_A BADH, betaine aldehyde 100.0 2E-105 8E-110 860.1 56.3 470 55-528 7-482 (490)
26 3pqa_A Lactaldehyde dehydrogen 100.0 4E-105 1E-109 854.7 55.4 457 57-528 2-463 (486)
27 4dng_A Uncharacterized aldehyd 100.0 7E-105 2E-109 855.4 56.0 469 55-529 7-478 (485)
28 3r64_A NAD dependent benzaldeh 100.0 7E-105 2E-109 858.2 56.1 469 54-529 12-485 (508)
29 3ros_A NAD-dependent aldehyde 100.0 5E-105 2E-109 853.3 53.4 453 71-528 5-457 (484)
30 1euh_A NADP dependent non phos 100.0 2E-104 7E-109 849.4 56.1 462 56-528 6-473 (475)
31 2j6l_A Aldehyde dehydrogenase 100.0 1E-104 4E-109 854.8 54.4 469 54-528 23-498 (500)
32 1uzb_A 1-pyrroline-5-carboxyla 100.0 6E-104 2E-108 852.3 58.2 467 55-528 38-515 (516)
33 1uxt_A Glyceraldehyde-3-phosph 100.0 1E-104 5E-109 853.7 52.8 464 55-529 19-492 (501)
34 1t90_A MMSDH, probable methylm 100.0 6E-104 2E-108 847.5 55.5 470 55-529 6-480 (486)
35 3ty7_A Putative aldehyde dehyd 100.0 5E-104 2E-108 847.4 50.2 464 55-527 8-475 (478)
36 3etf_A Putative succinate-semi 100.0 2E-102 6E-107 832.5 56.5 457 68-529 5-461 (462)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 9E-102 3E-106 839.1 53.8 475 52-529 61-551 (563)
38 3ju8_A Succinylglutamic semial 100.0 6E-100 2E-104 817.1 53.8 461 55-528 6-470 (490)
39 4h7n_A Aldehyde dehydrogenase; 100.0 3E-100 1E-104 816.5 51.0 454 68-528 4-462 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 9E-100 3E-104 865.7 57.4 471 53-529 530-1010(1026)
41 2y53_A Aldehyde dehydrogenase 100.0 6.5E-99 2E-103 817.1 49.4 465 55-528 8-518 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 1.6E-96 5E-101 784.5 50.8 445 69-528 5-456 (457)
43 3sza_A Aldehyde dehydrogenase, 100.0 5E-95 1.7E-99 773.8 51.9 428 89-529 15-448 (469)
44 3v4c_A Aldehyde dehydrogenase 100.0 9.5E-95 3.3E-99 783.4 44.9 453 53-525 28-514 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 1.8E-92 6.1E-97 762.6 46.9 443 67-526 4-480 (510)
46 3haz_A Proline dehydrogenase; 100.0 3.1E-91 1.1E-95 793.9 51.3 434 86-529 544-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 4E-85 1.4E-89 695.8 29.4 405 73-529 10-435 (463)
48 1vlu_A Gamma-glutamyl phosphat 100.0 2.2E-82 7.6E-87 675.6 25.5 394 93-528 15-439 (468)
49 3k9d_A LMO1179 protein, aldehy 100.0 4.9E-81 1.7E-85 666.5 32.4 417 85-528 5-448 (464)
50 1o20_A Gamma-glutamyl phosphat 100.0 4.3E-80 1.5E-84 652.3 30.6 387 91-529 13-422 (427)
51 4ghk_A Gamma-glutamyl phosphat 100.0 1.5E-79 5E-84 651.3 31.9 389 91-529 25-439 (444)
52 3my7_A Alcohol dehydrogenase/a 100.0 1.6E-77 5.5E-82 637.4 30.2 409 86-528 1-448 (452)
53 4gic_A HDH, histidinol dehydro 97.6 0.075 2.6E-06 54.1 31.5 258 179-525 118-399 (423)
54 1kae_A HDH, histidinol dehydro 97.3 0.18 6E-06 51.5 28.5 256 180-525 113-392 (434)
55 2fiu_A Conserved hypothetical 57.9 28 0.00096 27.7 6.8 61 379-459 15-76 (99)
56 1b93_A Protein (methylglyoxal 57.4 24 0.00081 30.7 6.6 114 192-333 12-135 (152)
57 1vmd_A MGS, methylglyoxal synt 53.0 19 0.00065 32.1 5.4 120 186-333 21-151 (178)
58 3lo3_A Uncharacterized conserv 48.6 30 0.001 27.2 5.4 62 379-460 14-76 (94)
59 2yvq_A Carbamoyl-phosphate syn 46.2 24 0.00083 30.1 4.9 63 237-303 60-132 (143)
60 2xw6_A MGS, methylglyoxal synt 45.6 16 0.00054 31.1 3.5 77 209-295 22-107 (134)
61 1s7i_A Hypothetical protein PA 41.0 84 0.0029 26.0 7.3 73 382-460 30-108 (124)
62 3hhl_A RPA0582; alpha-beta-bar 34.7 72 0.0025 27.2 6.1 66 378-460 45-111 (143)
63 3v42_A Folliculin; tumor suppr 33.7 39 0.0013 31.3 4.4 70 208-285 21-90 (226)
64 3pzy_A MOG; ssgcid, seattle st 31.6 22 0.00076 31.2 2.3 50 232-282 28-79 (164)
65 3iwt_A 178AA long hypothetical 28.7 64 0.0022 28.3 4.9 52 230-281 39-93 (178)
66 3fgh_A Transcription factor A, 28.0 1.3E+02 0.0043 21.5 5.7 36 100-135 29-64 (67)
67 3rfq_A Pterin-4-alpha-carbinol 25.8 25 0.00086 31.6 1.6 52 231-282 49-102 (185)
68 2zfz_A Arginine repressor; DNA 24.9 81 0.0028 23.8 4.2 36 217-256 20-55 (79)
69 1b4b_A Arginine repressor; cor 24.9 77 0.0026 23.4 3.9 36 217-256 12-47 (71)
70 2v9v_A Selenocysteine-specific 24.8 92 0.0032 25.6 5.0 83 321-406 34-125 (135)
71 1y5e_A Molybdenum cofactor bio 22.1 43 0.0015 29.3 2.4 52 231-282 31-85 (169)
72 2eqz_A High mobility group pro 21.9 1.7E+02 0.0058 22.1 5.6 35 101-135 49-83 (86)
73 2p5m_A Arginine repressor; alp 21.7 79 0.0027 24.1 3.6 36 217-256 24-59 (83)
74 1wu2_A MOEA protein, molybdopt 20.5 24 0.00081 35.8 0.4 52 232-283 212-264 (396)
75 1xxa_A ARGR, arginine represso 20.3 68 0.0023 24.2 2.9 37 217-256 14-50 (78)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=9.9e-114 Score=920.17 Aligned_cols=472 Identities=38% Similarity=0.630 Sum_probs=451.9
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
+.+.||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35679999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||+.+++. |+..+++.++||+++++++.+...|.. ++...+++++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a 164 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc-CCcceeEEecceeEEEEeccccCcchhhhhhHH
Confidence 999999999999999986 699999999999999988877665543 466788999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHH-Hhhc
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA-GAAG 291 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~-~~~~ 291 (533)
+||++||+||+|||+.||+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.+++ .+++
T Consensus 165 ~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~ 244 (490)
T 2wme_A 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS 244 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999988899999999999999999999999988876 4566
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 245 ~lk~---v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 245 SLKE---VTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HCCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred CCce---EEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 7888 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 447 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~ 447 (533)
++++||+++..+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 99999999999999999999999999999999998754 24799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 448 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
||||+++|+++|||++||||+|.++++++++++++|+||||++....+.+||||+|+||+||++|++|+++||+.|+|++
T Consensus 402 deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEE
Confidence 99999999999999999999999999999999999999999987777889999999999999999999999999999998
Q ss_pred ec
Q 009516 528 GD 529 (533)
Q Consensus 528 ~~ 529 (533)
+.
T Consensus 482 ~~ 483 (490)
T 2wme_A 482 EL 483 (490)
T ss_dssp EC
T ss_pred EC
Confidence 74
No 2
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5e-111 Score=900.34 Aligned_cols=474 Identities=57% Similarity=0.993 Sum_probs=456.3
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 10 LLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp GSCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34567899999998777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
++|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...+++++|+|||++|+|||||+.+.++++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 169 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKV 169 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHH
Confidence 99999999999999999999999999999999999988777665554456788999999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 170 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~ 249 (484)
T 3ifg_A 170 GPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP 249 (484)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGG
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 250 ~~k~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 326 (484)
T 3ifg_A 250 TVKK---LTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTES 326 (484)
T ss_dssp GTCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred cCCc---eEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 327 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 406 (484)
T 3ifg_A 327 GATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELV 406 (484)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999999998754468999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+||++|++|+++||+.|+|+++
T Consensus 407 ~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 407 RLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999877778999999999999999999999999999999875
No 3
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=9.8e-110 Score=893.01 Aligned_cols=471 Identities=59% Similarity=0.992 Sum_probs=454.8
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 110 (504)
T 3ek1_A 31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANAD 110 (504)
T ss_dssp CCSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999988778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
+|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 111 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 190 (504)
T 3ek1_A 111 DIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAA 190 (504)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999887776655555567889999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 191 ~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 270 (504)
T 3ek1_A 191 PALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT 270 (504)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 271 lk~---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 271 IKR---ISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp TCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred cCC---eEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||+++..+++++.+++++++++|+++++||... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL--GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA 425 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999763 479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 426 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 426 QANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999887778999999999999999999999999999999875
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=7e-109 Score=889.52 Aligned_cols=474 Identities=39% Similarity=0.667 Sum_probs=455.4
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhh--HHhccCCHHHHHHHHHHHHHHHHHh
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAH 130 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (533)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|++++++|+++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 110 (520)
T 3ed6_A 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEH 110 (520)
T ss_dssp SCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHh
Confidence 34678999999988778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
+++|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...+++++|+|||++|+|||||+.+.+++
T Consensus 111 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 190 (520)
T 3ed6_A 111 REALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190 (520)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999998877665554434677899999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 191 ~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa 270 (520)
T 3ed6_A 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA 270 (520)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987899999999999999999999999999999999
Q ss_pred cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 291 ~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
+++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 271 ~~l~~---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 271 NNVTN---IALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp TTTCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hcCCC---EEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
+++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 3589999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877789999999999999999999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 508 ~~~ 510 (520)
T 3ed6_A 508 TNT 510 (520)
T ss_dssp EES
T ss_pred EcC
Confidence 863
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=8.8e-109 Score=886.00 Aligned_cols=472 Identities=44% Similarity=0.749 Sum_probs=454.4
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (506)
T 3rh9_A 11 NLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREE 90 (506)
T ss_dssp CCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEe-eeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||+.+++.|+..+++.++||++.+++..+...+.. ++...++++ +|+|||++|+|||||+.+.+++++
T Consensus 91 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 169 (506)
T 3rh9_A 91 IGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLS 169 (506)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999988877655543 456788899 999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 170 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 249 (506)
T 3rh9_A 170 AALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQ 249 (506)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTT
T ss_pred HHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 250 l~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 326 (506)
T 3rh9_A 250 VKK---LALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDG 326 (506)
T ss_dssp TCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTT
T ss_pred CCc---eEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccC
Confidence 999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC-CCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
+++||+++..+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 327 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 406 (506)
T 3rh9_A 327 IDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVI 406 (506)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999999986433 68999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++.
T Consensus 407 ~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 407 DAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999999999999999999999999999999999999998887889999999999999999999999999999998763
No 6
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1e-108 Score=884.69 Aligned_cols=471 Identities=35% Similarity=0.605 Sum_probs=452.6
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEAD 102 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 34578999999987666 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHH-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.++ +.|+..+++.++||+++++++.+...+...++...+++++|+|||++|+|||||+.+.++++
T Consensus 103 ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 182 (498)
T 4f3x_A 103 EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKL 182 (498)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHH
Confidence 99999999999999999 89999999999999999988766655433456778999999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 183 a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~ 261 (498)
T 4f3x_A 183 APAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAK 261 (498)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999888899999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+
T Consensus 262 ~~k~---v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 262 TVKR---THLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp TTCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred hCCc---eeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCC-eEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
++++||++++.+++++.+++++++++|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 418 (498)
T 4f3x_A 339 ENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDA 418 (498)
T ss_dssp GCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCH
T ss_pred cCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHH
Confidence 9999999999999999999999999999 999999865446899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 419 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 419 VAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999887778999999999999999999999999999999875
No 7
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=7.4e-108 Score=877.11 Aligned_cols=473 Identities=57% Similarity=1.023 Sum_probs=455.6
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999987889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||..+++.|+..+++.++||+..+.+..+...+...++...+++++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999988776665555455678899999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++
T Consensus 249 ~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T 3jz4_A 249 KK---VSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGV 325 (481)
T ss_dssp CE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTC
T ss_pred Cc---eEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 453 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~ 453 (533)
++||++++.+++++.+++++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 326 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 405 (481)
T 3jz4_A 326 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQ 405 (481)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999874345799999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 454 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 454 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|++++
T Consensus 406 aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~~ 481 (481)
T 3jz4_A 406 ANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481 (481)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEeC
Confidence 9999999999999999999999999999999999998877889999999999999999999999999999998763
No 8
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=4.1e-108 Score=883.03 Aligned_cols=471 Identities=38% Similarity=0.635 Sum_probs=449.7
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999999865678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCC---CCCceeEEEeeeceEEEEEcCCCcchHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 208 (533)
+|++++++|+|||+.+++ .|+..+++.++||++++++..+...+.. .++...++.++|+|||++|+|||||+.+.+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 8999999999999999988776654432 223367899999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hh-cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCC
Q 009516 289 AA-GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367 (533)
Q Consensus 289 ~~-~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 367 (533)
++ +++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||
T Consensus 277 aa~~~lk~---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGd 353 (517)
T 2o2p_A 277 CALSNVKK---VSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGN 353 (517)
T ss_dssp HHHHTCCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSC
T ss_pred hHHhcCCe---EEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 99 89999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCC-
Q 009516 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT- 446 (533)
Q Consensus 368 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~- 446 (533)
|+|+++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 354 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 433 (517)
T 2o2p_A 354 PLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433 (517)
T ss_dssp TTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence 9999999999999999999999999999999999999976533579999999999999999999999999999999999
Q ss_pred -HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 447 -EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 447 -~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+||++|++++++||+.|+|
T Consensus 434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v 513 (517)
T 2o2p_A 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513 (517)
T ss_dssp CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEE
Confidence 9999999999999999999999999999999999999999999877778999999999999999999999999999999
Q ss_pred EEe
Q 009516 526 CLG 528 (533)
Q Consensus 526 ~~~ 528 (533)
+++
T Consensus 514 ~~~ 516 (517)
T 2o2p_A 514 TFE 516 (517)
T ss_dssp EEE
T ss_pred Eee
Confidence 875
No 9
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=4.8e-108 Score=880.65 Aligned_cols=473 Identities=37% Similarity=0.646 Sum_probs=452.8
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 91 (497)
T 3k2w_A 12 NKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHI 91 (497)
T ss_dssp TTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||++.+++..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 171 (497)
T 3k2w_A 92 LAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGP 171 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999988877665544345678899999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l 251 (497)
T 3k2w_A 172 ALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYM 251 (497)
T ss_dssp HHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++
T Consensus 252 ~p---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 328 (497)
T 3k2w_A 252 TP---VMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADS 328 (497)
T ss_dssp CC---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred CC---eEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcc--cC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++||+++..+++++.+++++++++|+++++||.. .+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 329 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 408 (497)
T 3k2w_A 329 QMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQ 408 (497)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHH
T ss_pred ccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999973 22 2589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++.
T Consensus 409 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 409 AIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 99999999999999999999999999999999999999998887889999999999999999999999999999998864
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-107 Score=881.17 Aligned_cols=471 Identities=41% Similarity=0.663 Sum_probs=454.2
Q ss_pred ccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhh--HHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
.++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| +.|+.++..+|.++|+++++.|++++
T Consensus 23 ~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (528)
T 3u4j_A 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQ 102 (528)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999987789999999999 99999999999999999999999999 78999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
++|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 103 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 182 (528)
T 3u4j_A 103 EELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERV 182 (528)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999988776655544346778999999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 183 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 262 (528)
T 3u4j_A 183 PWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAAR 262 (528)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++
T Consensus 263 ~lk~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 339 (528)
T 3u4j_A 263 TVKR---VGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNE 339 (528)
T ss_dssp TTCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred cCCc---eEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC-CCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
++++||+++..+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 419 (528)
T 3u4j_A 340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419 (528)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHH
Confidence 999999999999999999999999999999999987542 6899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 420 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 497 (528)
T 3u4j_A 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVT 497 (528)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEE
T ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999887788999999999999999999999999999999876
No 11
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=3.1e-107 Score=875.57 Aligned_cols=472 Identities=40% Similarity=0.668 Sum_probs=452.4
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-----HhccCCHHHHHHHHHHHHHHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SWSKLTAAERSKGLRKWYDLLM 128 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~ 128 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~ 86 (503)
T 3iwj_A 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVT 86 (503)
T ss_dssp CCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHH
T ss_pred CCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 35689999999887889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCccc-C--CCCCCceeEEEeeeceEEEEEcCCCcchH
Q 009516 129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-P--ATLPDRRLFVLKQPVGVAGAITPWNFPLA 205 (533)
Q Consensus 129 ~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 205 (533)
+++++|++++++|+|||+.+++.|+..+++.++||+++++++.+... + ....+...+++++|+|||++|+|||||+.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T 3iwj_A 87 EKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPML 166 (503)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHH
Confidence 99999999999999999999999999999999999999988765531 1 12235678899999999999999999999
Q ss_pred HHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHH
Q 009516 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285 (533)
Q Consensus 206 ~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 285 (533)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|
T Consensus 167 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i 246 (503)
T 3iwj_A 167 MATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKI 246 (503)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc
Q 009516 286 MAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 365 (533)
Q Consensus 286 ~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 365 (533)
++.+++++|| +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 247 ~~~aa~~l~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (503)
T 3iwj_A 247 MTAAAQLVKP---VSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKI 323 (503)
T ss_dssp HHHHGGGTCC---EEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHhcCCCC---EEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccC
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEe
Q 009516 366 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 443 (533)
Q Consensus 366 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~ 443 (533)
|+|+++++++||++++.+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 99999999999999999999999999999999999999998653 4689999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheee
Q 009516 444 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 523 (533)
Q Consensus 444 ~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k 523 (533)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|
T Consensus 404 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k 483 (503)
T 3iwj_A 404 FSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVK 483 (503)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEE
T ss_pred eCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeE
Confidence 99999999999999999999999999999999999999999999998777789999999999999999999999999999
Q ss_pred EEEEe
Q 009516 524 YVCLG 528 (533)
Q Consensus 524 ~v~~~ 528 (533)
+|+++
T Consensus 484 ~v~~~ 488 (503)
T 3iwj_A 484 QVTQY 488 (503)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
No 12
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=6.2e-107 Score=872.25 Aligned_cols=468 Identities=35% Similarity=0.581 Sum_probs=447.1
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34568999999998778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCC-C----CceeEEEeeeceEEEEEcCCCcchHHH
Q 009516 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL-P----DRRLFVLKQPVGVAGAITPWNFPLAMI 207 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~I~p~N~P~~~~ 207 (533)
+|++++++|+|||..+++.|+..+++.++||++++++..+...+... + +...+++++|+|||++|+|||||+.+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999999887665443221 2 356788999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHH
Q 009516 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287 (533)
Q Consensus 208 ~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 287 (533)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 249 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred HhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCC
Q 009516 288 GAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 367 (533)
Q Consensus 288 ~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 367 (533)
.++ +|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++||
T Consensus 250 ~aa--l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 250 KAK--MIP---VVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HCC--SSC---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred Hcc--CCc---EEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 887 888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCH
Q 009516 368 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 447 (533)
Q Consensus 368 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~ 447 (533)
|+ +++++||+++..+++++.+++++++++|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~---g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQ---GNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE---TTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCC---CceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 99 99999999999999999999999999999999999753 799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 448 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
||||+++|+++|||++||||+|.++++++++++++|+||||++.. ..+.+||||+|+||+||++|++|+++||+.|+|+
T Consensus 401 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~ 480 (505)
T 3prl_A 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480 (505)
T ss_dssp HHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEE
Confidence 999999999999999999999999999999999999999999876 4578999999999999999999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 481 ~~~ 483 (505)
T 3prl_A 481 LNL 483 (505)
T ss_dssp EEC
T ss_pred EeC
Confidence 763
No 13
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=6.8e-107 Score=870.34 Aligned_cols=466 Identities=35% Similarity=0.579 Sum_probs=441.8
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|
T Consensus 26 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 105 (497)
T 3i44_A 26 RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDM 105 (497)
T ss_dssp CCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEE-eeeceEEEEEcCCCcchHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVL-KQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
++++++|+|||+.+++ .|+..+++.++|+++..........+. .+...+++ ++|+|||++|+|||||+.+.+++++
T Consensus 106 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 183 (497)
T 3i44_A 106 AKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVI 183 (497)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 899999999999998876643322111 14446777 9999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 184 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~ 263 (497)
T 3i44_A 184 PALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNT 263 (497)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++||| |.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 264 ~k~---v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 339 (497)
T 3i44_A 264 LKR---VCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTG 339 (497)
T ss_dssp TCE---EEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCS
T ss_pred CCc---eeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 999 999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCc-ccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
+++||++++.+++++.+++++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 419 (497)
T 3i44_A 340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDE 419 (497)
T ss_dssp SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHH
Confidence 9999999999999999999999999999999994 322 2589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
||+++|+++|||+++|||+|.+++.++++++++|+||||. ....+.+||||+|.||+|+++|++++++||+.|+|+.
T Consensus 420 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~ 496 (497)
T 3i44_A 420 AVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496 (497)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEESC
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEEe
Confidence 9999999999999999999999999999999999999994 4456789999999999999999999999999999864
No 14
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=4.3e-107 Score=873.82 Aligned_cols=470 Identities=39% Similarity=0.620 Sum_probs=449.5
Q ss_pred ccceecCEEeeCCCCCe-EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKT-LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~-~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 20 ~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 99 (503)
T 1a4s_A 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998766778 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||++++++..+...+.. ++...++.++|+|||++|+|||||+.+.++++++
T Consensus 100 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 178 (503)
T 1a4s_A 100 IAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178 (503)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHHHH
Confidence 999999999999999999999999999999999988766544433 3456789999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 179 ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~ 257 (503)
T 1a4s_A 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257 (503)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999987 89999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++
T Consensus 258 ~~---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 334 (503)
T 1a4s_A 258 KH---VTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTET 334 (503)
T ss_dssp CE---EEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred Cc---eEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCccc--C----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH--S----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 447 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~ 447 (533)
++||+++..+++++.+++++++++|+++++||... + ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (503)
T 1a4s_A 335 RMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTE 414 (503)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCH
Confidence 99999999999999999999999999999999764 1 24799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 448 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 448 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|++
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 494 (503)
T 1a4s_A 415 EEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494 (503)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEE
Confidence 99999999999999999999999999999999999999999987777889999999999999999999999999999987
Q ss_pred ec
Q 009516 528 GD 529 (533)
Q Consensus 528 ~~ 529 (533)
+.
T Consensus 495 ~~ 496 (503)
T 1a4s_A 495 EM 496 (503)
T ss_dssp CC
T ss_pred cc
Confidence 63
No 15
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.4e-106 Score=868.76 Aligned_cols=471 Identities=40% Similarity=0.643 Sum_probs=449.8
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---HhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 3579999999876678999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
++|++++++|+|||+.++. .|+..+++.++||++.+++..+...+. .++...+++++|+|||++|+|||||+.+.+++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 9999999999999999875 699999999999999998877665443 23556789999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987889999999999999999999999999999999
Q ss_pred -cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 291 -GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 291 -~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
+++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 260 ~~~l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 336 (501)
T 1bxs_A 260 KSNLKR---VSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPL 336 (501)
T ss_dssp HTTCCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTT
T ss_pred hccCCc---EEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCc
Confidence 89999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
|+++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 416 (501)
T 1bxs_A 337 TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDD 416 (501)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred ccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976433579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++++++|++.|+|+++.
T Consensus 417 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~ 496 (501)
T 1bxs_A 417 VIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496 (501)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEcc
Confidence 99999999999999999999999999999999999999998766788999999999999999999999999999998863
No 16
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=1.1e-106 Score=867.58 Aligned_cols=472 Identities=39% Similarity=0.641 Sum_probs=450.8
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASE 85 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34679999999876678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 165 (479)
T 2imp_A 86 ISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAP 165 (479)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999887766665444334567789999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 166 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~ 245 (479)
T 2imp_A 166 ALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNI 245 (479)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999977788999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC-CC
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG-EG 372 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~ 372 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|+|+| ++
T Consensus 246 ~~---v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 322 (479)
T 2imp_A 246 TK---VCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERND 322 (479)
T ss_dssp CE---EEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSS
T ss_pred Cc---EEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 323 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~ 402 (479)
T 2imp_A 323 IAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAIS 402 (479)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999976323479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 403 ~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 403 MANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9999999999999999999999999999999999999877678999999999999999999999999999999875
No 17
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-106 Score=872.05 Aligned_cols=471 Identities=37% Similarity=0.616 Sum_probs=450.4
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 107 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 186 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPA 186 (515)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHH
Confidence 99999999999999999999999999999999888777655442345677899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 187 LaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~ 266 (515)
T 2d4e_A 187 LAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLK 266 (515)
T ss_dssp HHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999777899999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcc
Q 009516 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 374 (533)
Q Consensus 295 ~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 374 (533)
| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 267 ~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 343 (515)
T 2d4e_A 267 R---LSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETE 343 (515)
T ss_dssp E---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred c---eEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCc
Confidence 9 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--------CCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 375 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 375 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
+||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+|
T Consensus 344 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~ 422 (515)
T 2d4e_A 344 VGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKD 422 (515)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCC
Confidence 99999999999999999999999999999997642 1589999999999 99999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++++++||+.|+|+
T Consensus 423 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~ 502 (515)
T 2d4e_A 423 EEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIA 502 (515)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEE
Confidence 99999999999999999999999999999999999999999998777789999999999999999999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 503 ~~~ 505 (515)
T 2d4e_A 503 LPL 505 (515)
T ss_dssp EES
T ss_pred EcC
Confidence 863
No 18
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.5e-106 Score=867.30 Aligned_cols=470 Identities=36% Similarity=0.614 Sum_probs=448.1
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.+.++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 22 ~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 22 MQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456899999998655 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.+++. |+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 9999999999999999998 999999999999999887766654433235567899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999778899999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|||+|+
T Consensus 260 ~l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 336 (495)
T 1wnd_A 260 SIKR---THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDE 336 (495)
T ss_dssp GTCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTST
T ss_pred cCCc---cccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccC
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCC-CeEEeCCc-ccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++||++++.+++++.+++++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 ~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 415 (495)
T 1wnd_A 337 STELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ 415 (495)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHH
Confidence 999999999999999999999999999 99999997 53 2579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 416 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 416 VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999999999999999999999999999999999776678999999999999999999999999999999874
No 19
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.1e-106 Score=869.22 Aligned_cols=470 Identities=39% Similarity=0.616 Sum_probs=449.2
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---HhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876778999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.++. .|+..+++.++||++.+++..+...+. .++...+++++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 999999999999999875 699999999999999988876665443 235567899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh-
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 290 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~- 290 (533)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999977889999999999999999999999999999999
Q ss_pred cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 291 ~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
+++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|
T Consensus 260 ~~l~p---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 336 (500)
T 1o04_A 260 SNLKR---VTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFD 336 (500)
T ss_dssp TTCCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTS
T ss_pred hcCce---EEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCccc
Confidence 89999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
+++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 337 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 416 (500)
T 1o04_A 337 SKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEV 416 (500)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred ccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999764335799999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
|+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++++++|++.|+|+++.
T Consensus 417 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 417 VGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 9999999999999999999999999999999999999998776788999999999999999999999999999998864
No 20
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-106 Score=872.24 Aligned_cols=472 Identities=27% Similarity=0.464 Sum_probs=449.0
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 26 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (521)
T 4e4g_A 26 ELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNE 105 (521)
T ss_dssp EECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++||+++.+.+.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 185 (521)
T 4e4g_A 106 LAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAP 185 (521)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999887776654433334567889999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ .+.++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 186 ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l 264 (521)
T 4e4g_A 186 AIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNG 264 (521)
T ss_dssp HHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999995 566799999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
|| +++|||||||+||++|||++.|++.+++++|.|+||.|+|++|+|||++ ++|+|+++|+++++++++|+|++++
T Consensus 265 kp---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~ 341 (521)
T 4e4g_A 265 KR---AQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEK 341 (521)
T ss_dssp CE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTT
T ss_pred CC---eeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCcc
Confidence 99 9999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ 448 (533)
+++||+++..+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 342 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 421 (521)
T 4e4g_A 342 ADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYE 421 (521)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHH
Confidence 9999999999999999999999999999999997531 358999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCC--CCChHHHHHhhheeeEE
Q 009516 449 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYV 525 (533)
Q Consensus 449 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G--~~gg~~~l~~~~~~k~v 525 (533)
|||+++|+++|||++||||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 422 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v 501 (521)
T 4e4g_A 422 EALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTI 501 (521)
T ss_dssp HHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEE
Confidence 999999999999999999999999999999999999999998654 468999999999999 78999999999999999
Q ss_pred EEec
Q 009516 526 CLGD 529 (533)
Q Consensus 526 ~~~~ 529 (533)
+++.
T Consensus 502 ~~~~ 505 (521)
T 4e4g_A 502 TSRW 505 (521)
T ss_dssp EECC
T ss_pred EEec
Confidence 8864
No 21
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=6.6e-107 Score=873.59 Aligned_cols=468 Identities=36% Similarity=0.600 Sum_probs=448.0
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 93 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDA 93 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999887889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHH----HhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
|++++++|+|||+.++ |+..+++.++||++++++ +.+...+. .++. .+++++|+|||++|+|||||+.+.++
T Consensus 94 la~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~ 169 (517)
T 3r31_A 94 LSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQIACW 169 (517)
T ss_dssp HHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHHHHH
Confidence 9999999999999999 999999999999999988 66665543 2345 89999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 170 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 248 (517)
T 3r31_A 170 KAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 788999999999999999999999999999999
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
++++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+
T Consensus 249 a~~lk~---v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 325 (517)
T 3r31_A 249 AGHLKH---VTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325 (517)
T ss_dssp HHTTCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred hcCCCc---EEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
|+++++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 326 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (517)
T 3r31_A 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDD 405 (517)
T ss_dssp STTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECC
T ss_pred CcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCC
Confidence 9999999999999999999999999999999999993121 2589999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+
T Consensus 406 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~ 485 (517)
T 3r31_A 406 EDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVY 485 (517)
T ss_dssp HHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEE
T ss_pred HHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877889999999999999999999999999999998
Q ss_pred Eec
Q 009516 527 LGD 529 (533)
Q Consensus 527 ~~~ 529 (533)
++.
T Consensus 486 ~~~ 488 (517)
T 3r31_A 486 VST 488 (517)
T ss_dssp ECC
T ss_pred EcC
Confidence 763
No 22
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-106 Score=869.02 Aligned_cols=469 Identities=34% Similarity=0.564 Sum_probs=448.2
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--HhccCCHHHHHHHHHHHHHHHHHhHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 9 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKD 88 (495)
T ss_dssp SSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999876678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
+|++++++|+|||+.+++ .|+..+++.++||++++++..+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 89 LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 999999999999999998 8999999999999999888776654422 23467899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 88899999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 371 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 371 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+
T Consensus 247 ~l~p---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 323 (495)
T 3b4w_A 247 MLKP---CTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDP 323 (495)
T ss_dssp TTCC---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCT
T ss_pred cCCc---eeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccC
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 324 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 403 (495)
T 3b4w_A 324 AAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEED 403 (495)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHH
Confidence 99999999999999999999999999999999997643 2579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||+++|+++|||+++|||+|.+++.++++++++|+||||++. ..+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 404 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 404 AIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 999999999999999999999999999999999999999977 6789999999999999999999999999999998753
No 23
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=7.5e-106 Score=869.30 Aligned_cols=470 Identities=30% Similarity=0.497 Sum_probs=448.8
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
...++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRK 113 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3467899999997 588999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHH-HHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE-AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
++|++++++|+|||+.+++.|+..+++.++||+++ .+...+...+.. ++...++.++|+|||++|+|||||+.+.+++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 192 (538)
T 3qan_A 114 HEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGT 192 (538)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999999 666666655432 3677899999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 193 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 272 (538)
T 3qan_A 193 AVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272 (538)
T ss_dssp HHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cC------ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCc
Q 009516 291 GT------VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 364 (533)
Q Consensus 291 ~~------~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 364 (533)
++ +|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 273 ~~~~~~~~lkp---v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 349 (538)
T 3qan_A 273 VVRPGQNHLKR---VIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT 349 (538)
T ss_dssp SCCTTCCSCCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred hcccccccccc---EEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence 88 888 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEee
Q 009516 365 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 444 (533)
Q Consensus 365 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~ 444 (533)
+|||+|+++++||+++..+++++.+++++++.+| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 350 vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 428 (538)
T 3qan_A 350 VGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA 428 (538)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEe
Confidence 9999999999999999999999999999999999 999999875335899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEEC-CCCCC-CCCCCccCcCCCCCC-CCChHHHHHhhhe
Q 009516 445 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLE 521 (533)
Q Consensus 445 ~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN-~~~~~-~~~~PfGG~~~SG~G-~~gg~~~l~~~~~ 521 (533)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|||| ++... .+.+||||+|+||+| +++|++|+++||+
T Consensus 429 ~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~ 508 (538)
T 3qan_A 429 NDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQ 508 (538)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999 55554 789999999999999 9999999999999
Q ss_pred eeEEEEec
Q 009516 522 IKYVCLGD 529 (533)
Q Consensus 522 ~k~v~~~~ 529 (533)
.|+|+++.
T Consensus 509 ~k~v~~~~ 516 (538)
T 3qan_A 509 AKTVSEMY 516 (538)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEec
Confidence 99998864
No 24
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=7.7e-106 Score=861.49 Aligned_cols=469 Identities=58% Similarity=0.986 Sum_probs=448.8
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999753 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
++++++|+|||+.+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 91 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (487)
T 2w8n_A 91 ARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAA 170 (487)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999888766654443346678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceeccc---CChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~---g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |++.++++.|++||+|++|+||||+.+|+.|++.+++
T Consensus 171 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 250 (487)
T 2w8n_A 171 LAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN 250 (487)
T ss_dssp HHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHT
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 8677889999999999999999999999999999999
Q ss_pred CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-CccCCCCC
Q 009516 292 TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFG 370 (533)
Q Consensus 292 ~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~ 370 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.+++++ +++|||++
T Consensus 251 ~~~p---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~ 327 (487)
T 2w8n_A 251 SVKR---VSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFE 327 (487)
T ss_dssp TTCE---EEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred cCCc---EEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCccc
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCc-eeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~-~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
+++++||+++..+++++.+++++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 328 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~e 406 (487)
T 2w8n_A 328 EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEE 406 (487)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHH
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999764 2478 999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++++++||+.|+|+++.
T Consensus 407 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~~ 486 (487)
T 2w8n_A 407 AIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGG 486 (487)
T ss_dssp HHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEECC
T ss_pred HHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEec
Confidence 99999999999999999999999999999999999999998877778999999999999999999999999999998764
No 25
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.4e-105 Score=860.09 Aligned_cols=470 Identities=38% Similarity=0.635 Sum_probs=451.5
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 7 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 86 (490)
T 2ve5_A 7 QKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDEL 86 (490)
T ss_dssp BCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998878899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
++++++|+|||..+++. |+..+++.++||++++++..+...+. ..+...+++++|+|||++|+|||||+.+.++++++
T Consensus 87 a~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 165 (490)
T 2ve5_A 87 AALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAP 165 (490)
T ss_dssp HHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeeEeeccccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999997 99999999999999988776654443 24667889999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh-hcC
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA-AGT 292 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~-~~~ 292 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+ +++
T Consensus 166 ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~ 245 (490)
T 2ve5_A 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245 (490)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhcc
Confidence 9999999999999999999999999999999999999999998789999999999999999999999999999999 888
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+|++
T Consensus 246 l~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~ 322 (490)
T 2ve5_A 246 LKE---VTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp CCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccc---eEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 998 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 448 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ 448 (533)
+++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 323 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~d 402 (490)
T 2ve5_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED 402 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHH
Confidence 9999999999999999999999999999999998632 257999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 449 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 449 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 403 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~ 482 (490)
T 2ve5_A 403 EAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVE 482 (490)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEc
Confidence 99999999999999999999999999999999999999999887778999999999999999999999999999999876
No 26
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.7e-105 Score=854.70 Aligned_cols=457 Identities=38% Similarity=0.647 Sum_probs=432.8
Q ss_pred ceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009516 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (533)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (533)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999985 56 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhh
Q 009516 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (533)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 216 (533)
++++|+|||..+++.|+..+++.++||++.+++..+...+.. +...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSD--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCT--TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC--CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988776655432 567899999999999999999999999999999999
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHc----CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
+||+||+|||+.+|+++..+++++.++ |+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 99999999999988888999999999999999999999999999887
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 235 ~~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 FKK---IALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp SSE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred CCc---eeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 788 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||+++..+++++.+++++++.+|+++++||... |+|++|||+ +++++|++++||+||||++|++|+| ||||+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~---g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~ 386 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRD---KALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID 386 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE---TTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCC---CcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence 999999999999999999999999999999999763 699999999 9999999999999999999999999 99999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 387 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 387 IANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp HHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999999865 335899999999999999999999999999999876
No 27
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=7e-105 Score=855.44 Aligned_cols=469 Identities=32% Similarity=0.553 Sum_probs=428.1
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (485)
T 4dng_A 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDI 86 (485)
T ss_dssp CSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999998777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCC-CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
++++++|+|||+.+++.|+..+++.++|+++..+++.+...+.. .++...+++++|+|||++|+|||||+...++++++
T Consensus 87 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 166 (485)
T 4dng_A 87 IMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAP 166 (485)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999887766655433 34577899999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHH-HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC
Q 009516 214 ALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~-~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~ 292 (533)
||++||+||+|||+.+|+++ ..|.+++.++|+|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 167 ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~ 246 (485)
T 4dng_A 167 AIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246 (485)
T ss_dssp HHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhh
Confidence 99999999999999999999 99999999999999999999998888999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCC
Q 009516 293 VKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 372 (533)
Q Consensus 293 ~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 372 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|++
T Consensus 247 ~~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~ 323 (485)
T 4dng_A 247 FKR---MALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPK 323 (485)
T ss_dssp TCE---EEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTT
T ss_pred ccc---hhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCC
Confidence 998 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 373 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 373 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
+++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 324 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~ 400 (485)
T 4dng_A 324 TVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAID 400 (485)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976 379999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+|+++|++++++||+.|+|+++.
T Consensus 401 ~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 401 MANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999998754 678999999999999999999999999999998864
No 28
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.1e-105 Score=858.21 Aligned_cols=469 Identities=34% Similarity=0.565 Sum_probs=433.1
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (508)
T 3r64_A 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREE 91 (508)
T ss_dssp TTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999887789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCC-CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||..+++.|+..+++.++||++++++..+ ..+.. .++...+++++|+|||++|+|||||+.+.+++++
T Consensus 92 la~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 170 (508)
T 3r64_A 92 IVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVA 170 (508)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 999999999999999999999999999999998877665 44432 3467789999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHH-HHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 213 PALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~-~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
+||++||+||+|||+.+|+++ ..|++++.++|+|+|++|+|+|++.+.++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 171 ~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~ 250 (508)
T 3r64_A 171 PALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAIN 250 (508)
T ss_dssp HHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHS
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhc
Confidence 999999999999999999999 9999999999999999999999878999999999999999999999999999999988
Q ss_pred --CccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 292 --TVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 292 --~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+
T Consensus 251 ~~~l~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 327 (508)
T 3r64_A 251 GGPMKT---VALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPS 327 (508)
T ss_dssp SSSCCE---EEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred ccCCCc---eEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCc
Confidence 8888 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++++||++++.+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 328 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (508)
T 3r64_A 328 AEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAH 404 (508)
T ss_dssp SSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHH
T ss_pred cCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHH
Confidence 99999999999999999999999999999999999976 379999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 405 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~ 484 (508)
T 3r64_A 405 AAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIK 484 (508)
T ss_dssp HHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEEEEE
T ss_pred HHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999998754 67899999999999999999999999999999886
Q ss_pred c
Q 009516 529 D 529 (533)
Q Consensus 529 ~ 529 (533)
.
T Consensus 485 ~ 485 (508)
T 3r64_A 485 R 485 (508)
T ss_dssp C
T ss_pred c
Confidence 4
No 29
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=4.9e-105 Score=853.28 Aligned_cols=453 Identities=30% Similarity=0.492 Sum_probs=438.0
Q ss_pred eEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh
Q 009516 71 TLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV 150 (533)
Q Consensus 71 ~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 150 (533)
+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCch
Q 009516 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230 (533)
Q Consensus 151 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp 230 (533)
.|+..+++.++||++.+++..+...+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 9999999999999999988877654433 466889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEE
Q 009516 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI 310 (533)
Q Consensus 231 ~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~i 310 (533)
+++..|++++.++|+|+|++|+|+|++.++++ |+.||+|++|+||||+.+|+.|++.+++++|| +++|||||||+|
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~---v~lELGGk~p~i 239 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKK---STMELGGNDAFI 239 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCE---EEEECCCCCEEE
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCc---eEeecCCCCcce
Confidence 99999999999999999999999998888888 99999999999999999999999999999999 999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHH
Q 009516 311 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 390 (533)
Q Consensus 311 V~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 390 (533)
|++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||+|+++++||+++..+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009516 391 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 470 (533)
Q Consensus 391 i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 470 (533)
+++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999999986444689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 471 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 471 ~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 457 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDV 457 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEEC
Confidence 9999999999999999999877788999999999999999999999999999999876
No 30
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.9e-104 Score=849.40 Aligned_cols=462 Identities=34% Similarity=0.567 Sum_probs=441.2
Q ss_pred cceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|+
T Consensus 6 ~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 83 (475)
T 1euh_A 6 KNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIG 83 (475)
T ss_dssp CEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred ceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999997633 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCC----cee-EEEeeeceEEEEEcCCCcchHHHHHH
Q 009516 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD----RRL-FVLKQPVGVAGAITPWNFPLAMITRK 210 (533)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~I~p~N~P~~~~~~~ 210 (533)
+++++|+|||+.+++.|+..+++.++||++++++..+...+...++ ... ++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (475)
T 1euh_A 84 AILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSK 163 (475)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHH
Confidence 9999999999999999999999999999999887666544433234 466 89999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh
Q 009516 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (533)
Q Consensus 211 l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~ 290 (533)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 164 ~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 243 (475)
T 1euh_A 164 IAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243 (475)
T ss_dssp HHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999977789999999999999999999999999999887
Q ss_pred cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCC
Q 009516 291 GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 370 (533)
Q Consensus 291 ~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 370 (533)
+|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|||++
T Consensus 244 --~~~---v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 318 (475)
T 1euh_A 244 --MRP---IMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318 (475)
T ss_dssp --TSC---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG
T ss_pred --CCc---EEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc
Confidence 788 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 371 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 371 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 319 -~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ea 394 (475)
T 1euh_A 319 -DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEA 394 (475)
T ss_dssp -TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHH
T ss_pred -cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHH
Confidence 999999999999999999999999999999999976 3699999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECC-CCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~-~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+++|+++|||+++|||+|.++++++++++++|+|+||+ +....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 395 i~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 395 IEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 999999999999999999999999999999999999998 666678999999999999999999999999999999875
No 31
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.2e-104 Score=854.79 Aligned_cols=469 Identities=29% Similarity=0.495 Sum_probs=443.8
Q ss_pred cccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
..++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQV 100 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999994 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
|++++++|+|||+.+++.|+..+++.++|++++++++.+...+...++...+++++|+|||++|+|||||+.++++++++
T Consensus 101 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 180 (500)
T 2j6l_A 101 LGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAI 180 (500)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHH
Confidence 99999999999999999999999999999999887776655444334555678999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHH----HcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 181 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~a 259 (500)
T 2j6l_A 181 AMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMV 259 (500)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHh
Confidence 9999999999999999999999988866 56999999999999 778999999999999999999999999999999
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
++++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.
T Consensus 260 a~~l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 336 (500)
T 2j6l_A 260 QERFGR---SLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPW 336 (500)
T ss_dssp HHTTCE---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred ccCCCc---eEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcc
Confidence 999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHH
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 449 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~e 449 (533)
++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 337 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 416 (500)
T 2j6l_A 337 DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEE 416 (500)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHH
T ss_pred cCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHH
Confidence 99999999999999999999999999999999999976433579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHH--hhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEE
Q 009516 450 AIHMANDTNAGLAAYIFTNNLQRTWRVS--EALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 526 (533)
Q Consensus 450 ai~~~n~~~~gL~a~v~s~d~~~~~~~a--~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~ 526 (533)
||+++|+++|||+++|||+|.+++++++ .++++|+||||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 417 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~ 496 (500)
T 2j6l_A 417 VFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCT 496 (500)
T ss_dssp HHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEE
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999 779999999998755 3468999999999999999999999999999998
Q ss_pred Ee
Q 009516 527 LG 528 (533)
Q Consensus 527 ~~ 528 (533)
++
T Consensus 497 ~~ 498 (500)
T 2j6l_A 497 IN 498 (500)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 32
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.5e-104 Score=852.27 Aligned_cols=467 Identities=31% Similarity=0.513 Sum_probs=442.1
Q ss_pred ccceecCEEeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~-tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467999999963 6799999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccC-CCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 212 (533)
|++++++|+|||+.+++.|+..+++.++||++.+++..+...+ ...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 195 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195 (516)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999999888765432 223456778999999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh--
Q 009516 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-- 290 (533)
Q Consensus 213 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~-- 290 (533)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 196 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~ 275 (516)
T 1uzb_A 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRL 275 (516)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999977889999999999999999999999999999998
Q ss_pred ----cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccC
Q 009516 291 ----GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 291 ----~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 366 (533)
+++|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|
T Consensus 276 ~~~~~~~~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 276 APGQTWFKR---AYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp CTTCCSCCE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred cccccccce---eEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 77888 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCC
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 446 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~ 446 (533)
+| ++++++||++++.+++++.+++++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 430 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999999 89999976323579999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCcCCCCCC-CCChHHHHHhhheee
Q 009516 447 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEFLEIK 523 (533)
Q Consensus 447 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~--~~~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k 523 (533)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+| +++|.+++++||+.|
T Consensus 431 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k 510 (516)
T 1uzb_A 431 FAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMK 510 (516)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCee
Confidence 9999999999999999999999999999999999999999998654 3468999999999999 579999999999999
Q ss_pred EEEEe
Q 009516 524 YVCLG 528 (533)
Q Consensus 524 ~v~~~ 528 (533)
+|+++
T Consensus 511 ~v~~~ 515 (516)
T 1uzb_A 511 AVAER 515 (516)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99874
No 33
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.5e-104 Score=853.70 Aligned_cols=464 Identities=31% Similarity=0.504 Sum_probs=442.4
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-HhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 96 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 96 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4579999999863 7899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCC--CC--CceeEEEeeeceEEEEEcCCCcchHHHHH
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LP--DRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 209 (533)
|++++++|+|||+.+++.|+..+++.++||++++++..+...+.. .. +...+++++|+|||++|+|||||+.+.++
T Consensus 97 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (501)
T 1uxt_A 97 FAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVN 176 (501)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHH
Confidence 999999999999999999999999999999999888766554432 12 33678999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHh
Q 009516 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (533)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (533)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~a 255 (501)
T 1uxt_A 177 KITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVG 255 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999977 8999999999999999999999999999988
Q ss_pred hcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCC
Q 009516 290 AGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 369 (533)
Q Consensus 290 ~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 369 (533)
+ +|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|||+
T Consensus 256 a--l~~---v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 330 (501)
T 1uxt_A 256 G--VKQ---YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330 (501)
T ss_dssp C--SSE---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred C--CCe---EEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCcc
Confidence 7 888 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCC-ceeecEEeccCC---CCCcccccccccceEEEEeeC
Q 009516 370 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVK---SEMLVSREEVFGPVAPLLCFK 445 (533)
Q Consensus 370 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~-~~~~Ptvl~~~~---~~~~~~~eE~FGPv~~v~~~~ 445 (533)
|+++++||++++.+++++.+++++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+
T Consensus 331 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~ 407 (501)
T 1uxt_A 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVK 407 (501)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeC
Confidence 99999999999999999999999999999999999976 36 899999999999 999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCC-CCCCCCCCccCcCCCCCCCCChHHHHHhhheeeE
Q 009516 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 524 (533)
Q Consensus 446 ~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~-~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~ 524 (533)
|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|++++++||+.|+
T Consensus 408 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~ 487 (501)
T 1uxt_A 408 DLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKT 487 (501)
T ss_dssp SHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeE
Confidence 999999999999999999999999999999999999999999987 5566789999999999999999999999999999
Q ss_pred EEEec
Q 009516 525 VCLGD 529 (533)
Q Consensus 525 v~~~~ 529 (533)
|+++.
T Consensus 488 v~~~~ 492 (501)
T 1uxt_A 488 IVFNY 492 (501)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98863
No 34
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=5.5e-104 Score=847.54 Aligned_cols=470 Identities=32% Similarity=0.540 Sum_probs=445.0
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
++++++|+|||+.+++.|+..+++.++||+.+.+.+.+...+...++...+++++|+|||++|+|||||+.+.++++++|
T Consensus 86 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 165 (486)
T 1t90_A 86 AHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMA 165 (486)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999988777766543322235567899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 166 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~ 244 (486)
T 1t90_A 166 IALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244 (486)
T ss_dssp HHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999 46789999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCe-EEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 295 KVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR-VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 295 ~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
| +++|||||||+||++|||++.|++.+++++|.|+||.|++++| +|||++ +|+|+++|.++++++++|+|+++++
T Consensus 245 p---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~ 320 (486)
T 1t90_A 245 R---VQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGV 320 (486)
T ss_dssp E---EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTC
T ss_pred c---EEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCC
Confidence 9 9999999999999999999999999999999999999999999 999999 9999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 452 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~ 452 (533)
++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~ 400 (486)
T 1t90_A 321 FLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIE 400 (486)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999997432 2479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCccCcCCCCCC--CCChHHHHHhhheeeEEEEec
Q 009516 453 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 453 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~-~~~~PfGG~~~SG~G--~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|++|+++||+.|+|+++.
T Consensus 401 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 401 IANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp HHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999986543 468999999999999 899999999999999998763
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.9e-104 Score=847.39 Aligned_cols=464 Identities=36% Similarity=0.591 Sum_probs=421.5
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 87 (478)
T 3ty7_A 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDI 87 (478)
T ss_dssp CEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46799999999878899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHH-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 213 (533)
++++++|+|||+.++ ..|+..+++.++||++.+++..+... +...+++++|+|||++|+|||||+.+.++++++
T Consensus 88 a~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (478)
T 3ty7_A 88 VQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAA 162 (478)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999 78999999999999999887655431 245788999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCc
Q 009516 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (533)
Q Consensus 214 ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~ 293 (533)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~ 242 (478)
T 3ty7_A 163 AFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDF 242 (478)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTT
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred cccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCc
Q 009516 294 KKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 373 (533)
Q Consensus 294 k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 373 (533)
|| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++
T Consensus 243 ~~---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 319 (478)
T 3ty7_A 243 KK---VSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGT 319 (478)
T ss_dssp CE---EECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred Cc---eEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccC---CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHH
Q 009516 374 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 450 (533)
Q Consensus 374 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~ea 450 (533)
++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 320 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eA 399 (478)
T 3ty7_A 320 QVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEA 399 (478)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHH
Confidence 999999999999999999999999999999994322 35899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEE
Q 009516 451 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 527 (533)
Q Consensus 451 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~ 527 (533)
|+++|+++|||+++|||+|.++++++++++++|+||||+ ....+.+||||+|+||+|+++|++++++||+.|+|+.
T Consensus 400 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 400 IQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999999 5556789999999999999999999999999999873
No 36
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.8e-102 Score=832.48 Aligned_cols=457 Identities=35% Similarity=0.547 Sum_probs=438.6
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009516 68 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (533)
Q Consensus 68 ~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (533)
+..+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 35779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCC
Q 009516 148 EAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (533)
Q Consensus 148 ~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (533)
+++.|+..+++.++||++.+++..+.. +...++...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999999998877654 3333456788999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCC
Q 009516 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNA 307 (533)
Q Consensus 228 ~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~ 307 (533)
.+|+++..+++++.++|+|+|++|+|+|+ .+.+..|+.||+|++|+||||+.+|+.|++.+++++|| +++||||||
T Consensus 164 ~tp~~~~~l~~~l~~aglP~gv~~vv~g~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~---v~lElGGk~ 239 (462)
T 3etf_A 164 NVTGCAQMIARILAEAGTPAGVYGWVNAN-NEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKK---CVLELGGSD 239 (462)
T ss_dssp TCHHHHHHHHHHHHHTTCCBTTEEECCCC-HHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCC---EEEECCCCE
T ss_pred CCcHHHHHHHHHHHHhCCCcCeEEEEECC-HHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCc---eEEEcCCCC
Confidence 99999999999999999999999999994 57789999999999999999999999999999999999 999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHH
Q 009516 308 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 387 (533)
Q Consensus 308 ~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~ 387 (533)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEc
Q 009516 388 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 467 (533)
Q Consensus 388 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s 467 (533)
.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999986544689999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 468 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 468 ~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|+++.
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999999998877789999999999999999999999999999998865
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=9.1e-102 Score=839.13 Aligned_cols=475 Identities=23% Similarity=0.348 Sum_probs=442.5
Q ss_pred CccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHh
Q 009516 52 LLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (533)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (533)
..+.++||||+|+.+ +..+.++||.| |+++++++.++.+|+++|+++|++||+.|+.++..+|+++|++++++|+++
T Consensus 61 ~~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~ 138 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGP 138 (563)
T ss_dssp CEECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred CccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 345678999999985 45788999998 899999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHcCCCHHHHhHH-HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHH
Q 009516 131 -KEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (533)
Q Consensus 131 -~~~la~~~~~e~Gk~~~~a~~E-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 208 (533)
+++|+.++++|+|||+.+++.| +..++++++||++.++++.+.......++...+.++.|+|||++|+|||||+....
T Consensus 139 ~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~ 218 (563)
T 4e3x_A 139 RRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGN 218 (563)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHH
T ss_pred cHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHH
Confidence 9999999999999999999987 99999999999999988876532222223445677788899999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHH
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (533)
+++++|| +||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 219 ~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 219 LAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 599999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred hhcCccc---cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc
Q 009516 289 AAGTVKK---VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 365 (533)
Q Consensus 289 ~~~~~k~---~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 365 (533)
+++++|| ..|+++|||||||+||++|||+|.|++.+++++|.|+||.|+|++|+|||+++||+|+++|+++++++++
T Consensus 298 aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 298 VAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp HHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccC
Confidence 9988874 2359999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCcccCcccCHHHHHHHHHHHHHHHH-CCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEe
Q 009516 366 GDG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 443 (533)
Q Consensus 366 G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~ 443 (533)
||| .|+++++||++++.+++++.++|+++++ +|+++++||..++..|+|++|||+.+++++|++++||+||||++|++
T Consensus 378 Gdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 457 (563)
T 4e3x_A 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYV 457 (563)
T ss_dssp SCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEE
T ss_pred CCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEE
Confidence 999 9999999999999999999999999996 89999999987544689999999999999999999999999999999
Q ss_pred eCC--HHHHHHHH-HcCCCCcEEEEEcCCHHHHHHHHhhcc--eeEEEECCCCCC--CCCCCccCcCCCCCC-CCChHHH
Q 009516 444 FKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYG 515 (533)
Q Consensus 444 ~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~V~iN~~~~~--~~~~PfGG~~~SG~G-~~gg~~~ 515 (533)
|+| +||||+++ |+++|||+++|||+|.+++.+++++++ +|+||||+.... .+.+||||+|.||+| +++|+++
T Consensus 458 ~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~ 537 (563)
T 4e3x_A 458 YPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHY 537 (563)
T ss_dssp ECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTG
T ss_pred ECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHH
Confidence 997 69999999 799999999999999999999999976 999999997643 467999999999998 8899999
Q ss_pred HHhhheeeEEEEec
Q 009516 516 MDEFLEIKYVCLGD 529 (533)
Q Consensus 516 l~~~~~~k~v~~~~ 529 (533)
|++|++.|+|..+.
T Consensus 538 l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 538 ILRWTSPQVIKETH 551 (563)
T ss_dssp GGGGBCCEEEEEEC
T ss_pred HHHhCceEEEEEeC
Confidence 99999999998764
No 38
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.9e-100 Score=817.11 Aligned_cols=461 Identities=30% Similarity=0.456 Sum_probs=436.2
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (533)
.++||||+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 6 ~~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 84 (490)
T 3ju8_A 6 STHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADEL 84 (490)
T ss_dssp CCEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999986 3578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHH
Q 009516 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (533)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 214 (533)
++++++|+|||+.+++.|+..+++.++|+++..++..+...+.. .+...+++++|+|||++|+|||||+.+.++++++|
T Consensus 85 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 163 (490)
T 3ju8_A 85 ARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPA 163 (490)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999998887766543321 24456778999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCcc
Q 009516 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (533)
Q Consensus 215 LaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k 294 (533)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 164 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~ 242 (490)
T 3ju8_A 164 LLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242 (490)
T ss_dssp HHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTT
T ss_pred HHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999 57899999999999999999999999999999999999
Q ss_pred cccee-eecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHhhcCccCC-CCCC
Q 009516 295 KVCRV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD-GFGE 371 (533)
Q Consensus 295 ~~~~~-~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~-p~~~ 371 (533)
| + ++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.|+
T Consensus 243 ~---v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~ 319 (490)
T 3ju8_A 243 K---ILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQP 319 (490)
T ss_dssp S---EEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSS
T ss_pred C---cEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCC
Confidence 8 8 7999999999999999999999999999999999999999999999996 9999999999999999999 9999
Q ss_pred CcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH
Q 009516 372 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 451 (533)
Q Consensus 372 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai 451 (533)
++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|+|+||||
T Consensus 320 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi 398 (490)
T 3ju8_A 320 APFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAI 398 (490)
T ss_dssp CCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHH
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999999997654568999999999 99999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 452 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 452 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~-~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||++ ++++||+.|+|++.
T Consensus 399 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 399 REANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYP 470 (490)
T ss_dssp HHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEE
T ss_pred HHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEe
Confidence 99999999999999999999999999999999999999765 4578999999999985 58999999998875
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=3.2e-100 Score=816.55 Aligned_cols=454 Identities=29% Similarity=0.434 Sum_probs=429.7
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009516 68 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (533)
Q Consensus 68 ~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (533)
+.++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHhCc-ccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecC
Q 009516 148 EAVGEVDYGAKFIEFYAEEAKRVYGE-IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226 (533)
Q Consensus 148 ~a~~Ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 226 (533)
++..|+..++..+++|+..+.+.... ..+...++......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 55689999999999999888776543 23333456667788999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCC
Q 009516 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGN 306 (533)
Q Consensus 227 ~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~ 306 (533)
+.+|+++..+++++.++|+|+|++|+++| +.+.+..|+.| +++|+||||+.+|+.|++.+++++|| +++|||||
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~---v~lElGGk 236 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAARRFIP---AYLELGGK 236 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCC---EEEECCCC
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhccccc---ccccCCCc
Confidence 99999999999999999999999999999 56788899976 89999999999999999999999999 99999999
Q ss_pred CcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHH
Q 009516 307 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 386 (533)
Q Consensus 307 ~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~ 386 (533)
||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++..+.++
T Consensus 237 ~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (474)
T 4h7n_A 237 DPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGI 316 (474)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHH
T ss_pred CccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCeEEeCCcccC-CCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEE
Q 009516 387 VETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 465 (533)
Q Consensus 387 ~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v 465 (533)
+.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 317 v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 396 (474)
T 4h7n_A 317 INDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAV 396 (474)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEE
Confidence 99999999999999999998765 56899999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCcCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009516 466 FTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 466 ~s~d~~~~~~~a~~l~~G~V~iN~~~~~--~~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k~v~~~ 528 (533)
||+|.++++++++++++|+|+||+.... .+..||||+|.||+| +++|.+|+++|++.|+|+++
T Consensus 397 ~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~ 462 (474)
T 4h7n_A 397 FAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIK 462 (474)
T ss_dssp ECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEEC
Confidence 9999999999999999999999987653 468999999999998 78999999999999999886
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=9e-100 Score=865.67 Aligned_cols=471 Identities=30% Similarity=0.453 Sum_probs=447.4
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~t-g~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
...++||||+|+.+ +++++++||+| ++++++++.++.+|+++|+++|++||+.|+.++..+|+++|++++++|++++
T Consensus 530 ~~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~ 607 (1026)
T 4f9i_A 530 KTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRL 607 (1026)
T ss_dssp EEECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 35678999999974 78999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHH
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 211 (533)
++|+.++++|+|||+.++..|+..++++++||+.+++++.+...+...++..++..++|+|||++|+|||||+.+.++++
T Consensus 608 ~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~ 687 (1026)
T 4f9i_A 608 FELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMA 687 (1026)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999988876544333457788899999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhh-
Q 009516 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 290 (533)
Q Consensus 212 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~- 290 (533)
++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 688 a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~ 767 (1026)
T 4f9i_A 688 SAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAK 767 (1026)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred -----cCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc
Q 009516 291 -----GTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 365 (533)
Q Consensus 291 -----~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 365 (533)
+++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|+|++|+|||++++|+|+++|+++++++++
T Consensus 768 ~~~~~~~lkp---v~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 768 VHPGQANVKK---IISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp CCTTCCSCCE---EEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred ccccccCccc---eEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 35677 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeC
Q 009516 366 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 445 (533)
Q Consensus 366 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~ 445 (533)
|+|.++++++||+|++.+++++.++|++++++| ++++||..++..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999997654348999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCccCcCCCCCCC-CChHHHHHhhhee
Q 009516 446 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEI 522 (533)
Q Consensus 446 ~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~--~~~~PfGG~~~SG~G~-~gg~~~l~~~~~~ 522 (533)
|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+...+ .+.+||||+|.||+|+ +||++++++|++.
T Consensus 924 d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~ 1003 (1026)
T 4f9i_A 924 DFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDP 1003 (1026)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceE
Confidence 999999999999999999999999999999999999999999997653 3679999999999995 5999999999999
Q ss_pred eEEEEec
Q 009516 523 KYVCLGD 529 (533)
Q Consensus 523 k~v~~~~ 529 (533)
|+|+++.
T Consensus 1004 k~v~~~~ 1010 (1026)
T 4f9i_A 1004 RVVTENT 1010 (1026)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998864
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=6.5e-99 Score=817.07 Aligned_cols=465 Identities=22% Similarity=0.325 Sum_probs=425.6
Q ss_pred ccceecCEEeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHHhccCCHHHHHHHHHHHHHHHHHhHHH
Q 009516 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (533)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (533)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.++..+|.++|+++++.|++++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45799999997643 579999999999999999988 8999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhC-------cccCCCCCCc-eeEEEeeec-eEEEEEcCCCcch
Q 009516 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-------EIIPATLPDR-RLFVLKQPV-GVAGAITPWNFPL 204 (533)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~-------~~~~~~~~~~-~~~~~~~P~-GVv~~I~p~N~P~ 204 (533)
|++++++|+|||+.+++.|+..+++.++||++.++++.+ ...+...++. ..+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 999999999999999999999999999999998877643 2122222222 457889997 9999999999999
Q ss_pred HHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC-CCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHH
Q 009516 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283 (533)
Q Consensus 205 ~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 283 (533)
.++++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.++++.| +++++|+||||+.+|+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~ 242 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAA 242 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 79999999998654443333 5799999999999999
Q ss_pred HHHHHhh--cCccccceeeecCCCCCcEEEccCC-----CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHH
Q 009516 284 KLMAGAA--GTVKKVCRVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 356 (533)
Q Consensus 284 ~i~~~~~--~~~k~~~~~~lElgG~~~~iV~~dA-----d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l 356 (533)
.|++.++ +++|| +++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 243 ~i~~~aa~a~~~k~---v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 319 (534)
T 2y53_A 243 TLRAHPAFVQRGAR---LNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319 (534)
T ss_dssp HHHTSHHHHTTCCE---EEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred HHHHhhhhhcCCCc---EEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence 9998875 78898 99999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCccc-----C-CCCceeecEEeccCCCC--Cc
Q 009516 357 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-----S-LGMTFYEPTVLSNVKSE--ML 428 (533)
Q Consensus 357 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-----~-~~~~~~~Ptvl~~~~~~--~~ 428 (533)
+++++++++|||+|+++++||++++.+++++.++|+++ .+|+++++||... + ..|+|++|||+.+++++ |+
T Consensus 320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~ 398 (534)
T 2y53_A 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL 398 (534)
T ss_dssp HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSS
T ss_pred HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCH
Confidence 99999999999999999999999999999999999999 6999999999742 1 24799999999999887 68
Q ss_pred ccccccccceEEEEeeC---CH-----HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc--ceeEEEECCCCC------
Q 009516 429 VSREEVFGPVAPLLCFK---TE-----EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI------ 492 (533)
Q Consensus 429 ~~~eE~FGPv~~v~~~~---~~-----~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l--~~G~V~iN~~~~------ 492 (533)
+++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+||||++..
T Consensus 399 i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~ 478 (534)
T 2y53_A 399 LHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTG 478 (534)
T ss_dssp TTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCC
T ss_pred HHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccc
Confidence 99999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ---CCCCCCccCcCCCCCCCC-ChHHHHHhhheeeEEEEe
Q 009516 493 ---STEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 493 ---~~~~~PfGG~~~SG~G~~-gg~~~l~~~~~~k~v~~~ 528 (533)
..+.+||||+|.||+|++ +|++++++|++.|+|...
T Consensus 479 ~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 479 HGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp SSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred cCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 246899999999999999 799999999999998764
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.6e-96 Score=784.54 Aligned_cols=445 Identities=25% Similarity=0.388 Sum_probs=402.5
Q ss_pred CCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 009516 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 148 (533)
Q Consensus 69 ~~~~~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 148 (533)
-..+++.||.||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 84 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV 84 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hh-HHHHHHHHHHHHHHHHHHHHhCcc-cCC--CCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEe
Q 009516 149 AV-GEVDYGAKFIEFYAEEAKRVYGEI-IPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 224 (533)
Q Consensus 149 a~-~Ev~~~~~~l~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlK 224 (533)
++ .|+..+++.++|+++.+++..+.. .+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 85 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 164 (457)
T 3lns_A 85 VDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIK 164 (457)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 98 599999999999999988765431 211 12356788999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCC
Q 009516 225 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELG 304 (533)
Q Consensus 225 ps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElg 304 (533)
||+.+|+++..+++++.++ +|+|++|+|+| +.+.++.|+. ++|++|+||||+.+|+.|++.+++++|| +++|||
T Consensus 165 ps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~p---v~lElG 238 (457)
T 3lns_A 165 PSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTP---VVLELG 238 (457)
T ss_dssp CCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCC---EEEECC
T ss_pred CCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCc---eEEECC
Confidence 9999999999999999999 99999999999 6788999998 6899999999999999999999999999 999999
Q ss_pred CCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHH
Q 009516 305 GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 384 (533)
Q Consensus 305 G~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~ 384 (533)
||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||+++++++
T Consensus 239 Gk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~ 313 (457)
T 3lns_A 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQV 313 (457)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHH
T ss_pred CCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 7776 99999999999
Q ss_pred HHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHc-CCCCcEE
Q 009516 385 EKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND-TNAGLAA 463 (533)
Q Consensus 385 ~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~-~~~gL~a 463 (533)
+++.++++++ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 314 ~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 314 QRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 9999999975 36999999764 35799999999999999999999999999999999999999999999 9999999
Q ss_pred EEEcCCHHHHHHHHhhcceeEEEECCCCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 464 YIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 464 ~v~s~d~~~~~~~a~~l~~G~V~iN~~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
+|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 390 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 390 YVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999999999999999999999754 467899999999999999999999999999999864
No 43
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=5e-95 Score=773.75 Aligned_cols=428 Identities=29% Similarity=0.446 Sum_probs=397.4
Q ss_pred CCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHH
Q 009516 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA 167 (533)
Q Consensus 89 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~ 167 (533)
.+.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++..++|+++..
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999997 59999999999988877
Q ss_pred HHHhCcccC---CCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcC
Q 009516 168 KRVYGEIIP---ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 244 (533)
Q Consensus 168 ~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aG 244 (533)
.+....... ....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 655432111 1112456889999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHH
Q 009516 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGA 324 (533)
Q Consensus 245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i 324 (533)
+|+|++|+|+|++ +.+..|+.| +|++|+||||+.+|+.|++.+++++|| +++|||||||+||++|||+|.|++.+
T Consensus 174 lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkp---v~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 174 LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTP---VTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCC---EEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCc---eEEecCCCCceEECCCCCHHHHHHHH
Confidence 9999999999954 455678888 899999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeC
Q 009516 325 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404 (533)
Q Consensus 325 ~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 404 (533)
++++|.|+||.|++++|+|||++++|+|+++|+++++++ +|+|.++++++||++++.+++++.+++ +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 699999999999999999999999998 69999999
Q ss_pred CcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcceeE
Q 009516 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 484 (533)
Q Consensus 405 g~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~ 484 (533)
|... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~ 401 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGG 401 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 9875 357999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCC--CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEec
Q 009516 485 VGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 485 V~iN~~~~--~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~~ 529 (533)
||||++.. ..+.+||||+|+||+|+++|.+|+++||+.|+|+++.
T Consensus 402 V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 402 VAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred EEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 99999863 4678999999999999999999999999999998864
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.5e-95 Score=783.44 Aligned_cols=453 Identities=25% Similarity=0.323 Sum_probs=415.4
Q ss_pred ccccceecCEEeeCCCCCeEEeecCCCCCEEE-EEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhH
Q 009516 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIA-NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (533)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~tg~~l~-~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (533)
...++||||+|+.+. . ++||+||++++ +++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 28 ~~~~~~I~G~~~~~~--~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (528)
T 3v4c_A 28 PKGKHLVAGEWLDGA--G---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARA 102 (528)
T ss_dssp CCCCEEETTEEECCS--S---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEecCC--C---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 346789999999853 2 99999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHH--hCccc----CCC--CCCceeEEEeeeceEEEEEcCCCcc
Q 009516 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV--YGEII----PAT--LPDRRLFVLKQPVGVAGAITPWNFP 203 (533)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~--~~~~~----~~~--~~~~~~~~~~~P~GVv~~I~p~N~P 203 (533)
++|++++++|+|||+.+++.|+..+++.++||++.+++. .+... +.. .++...+++++|+|||++|+|||||
T Consensus 103 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 182 (528)
T 3v4c_A 103 EAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFP 182 (528)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSST
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcch
Confidence 999999999999999999999999999999999998872 22221 111 1234578899999999999999999
Q ss_pred hHHHH--HHHHHHhhcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeC
Q 009516 204 LAMIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 277 (533)
Q Consensus 204 ~~~~~--~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftG 277 (533)
+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.++++.|+.||+|++|+|||
T Consensus 183 ~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTG 262 (528)
T 3v4c_A 183 LAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTG 262 (528)
T ss_dssp TTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEES
T ss_pred HHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEEC
Confidence 99865 99999999999999999999999999998875 5689999999999998889999999999999999999
Q ss_pred CHHHHHHHHHHhhcCc--cccceeeecCCCCCcEEEccCC---CHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHH
Q 009516 278 STAVGKKLMAGAAGTV--KKVCRVSLELGGNAPCIVFDDA---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEK 351 (533)
Q Consensus 278 s~~~g~~i~~~~~~~~--k~~~~~~lElgG~~~~iV~~dA---d~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~-i~d~ 351 (533)
|+.+|+.|++.+++++ || +++|||||||+||++|| |++.|++.+++++|.|+||.|+|++|+|||++ +||+
T Consensus 263 S~~~G~~i~~~aa~~~~~~p---v~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~ 339 (528)
T 3v4c_A 263 SLAGGRALFDLCAARPEPIP---FFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADR 339 (528)
T ss_dssp CHHHHHHHHHHHHHSSSCCC---EEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHH
T ss_pred ChHHHHHHHHHHhhccCCCc---eEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHH
Confidence 9999999999999988 77 99999999999999999 88999999999999999999999999999997 9999
Q ss_pred HHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCC---Cc
Q 009516 352 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---ML 428 (533)
Q Consensus 352 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~---~~ 428 (533)
|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+.+++++ |+
T Consensus 340 f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~ 407 (528)
T 3v4c_A 340 FTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADH 407 (528)
T ss_dssp HHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCG
T ss_pred HHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccCh
Confidence 999999999998754 67899998888887877764 489999999975 4799999999988887 89
Q ss_pred ccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC--CHHHHHHHHhhcc--eeEEEECCCCC---CCCCCCccC
Q 009516 429 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLI---STEVAPFGG 501 (533)
Q Consensus 429 ~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~--d~~~~~~~a~~l~--~G~V~iN~~~~---~~~~~PfGG 501 (533)
+++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+||||++.. ..+.+||||
T Consensus 408 i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG 487 (528)
T 3v4c_A 408 ALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGG 487 (528)
T ss_dssp GGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCC
T ss_pred hhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCC
Confidence 9999999999999999999999999999999999999999 8999999999998 99999999654 347899999
Q ss_pred -cCCCCCCCCC--hHHHHHhhheeeEE
Q 009516 502 -VKQSGLGREG--SKYGMDEFLEIKYV 525 (533)
Q Consensus 502 -~~~SG~G~~g--g~~~l~~~~~~k~v 525 (533)
+|.||+|+++ |++|+++||+.|++
T Consensus 488 ~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 488 PYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp TTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 9999999985 99999999999975
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.8e-92 Score=762.62 Aligned_cols=443 Identities=20% Similarity=0.252 Sum_probs=408.0
Q ss_pred CCCCeEEeecCCCCCEE-EEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 009516 67 YDGKTLEVHNPATGEVI-ANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP 145 (533)
Q Consensus 67 ~~~~~~~v~~P~tg~~l-~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~ 145 (533)
.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||
T Consensus 4 ~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 83 (510)
T 1ez0_A 4 QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 83 (510)
T ss_dssp -CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 35788999999999999 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHH--HhCccc----CCCCC-C-ceeEEEeeeceEEEEEcCCCcchHHH--HHHHHHHh
Q 009516 146 LKEAVGEVDYGAKFIEFYAEEAKR--VYGEII----PATLP-D-RRLFVLKQPVGVAGAITPWNFPLAMI--TRKVGPAL 215 (533)
Q Consensus 146 ~~~a~~Ev~~~~~~l~~~a~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~GVv~~I~p~N~P~~~~--~~~l~~AL 215 (533)
+.+++.|+..+++.++||++.+++ ..+... +...+ + ...+++++|+|||++|+|||||+.+. .+++++||
T Consensus 84 ~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~AL 163 (510)
T 1ez0_A 84 EVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASAL 163 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHH
Confidence 999999999999999999999876 333322 11111 1 24678999999999999999999985 49999999
Q ss_pred hcCCEEEEecCCCchHHHHHHHHHH----HHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhc
Q 009516 216 ACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (533)
Q Consensus 216 aaGN~VVlKps~~tp~~~~~l~~ll----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~ 291 (533)
++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.++++.|+.||+|++|+||||+.+|+.|++.+++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 243 (510)
T 1ez0_A 164 AAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 243 (510)
T ss_dssp HHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc
Confidence 9999999999999999999999988 567999999999999777899999999999999999999999999999998
Q ss_pred Cc--cccceeeecCCCCCcEEEccCCCHH--HHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHhhcCccC
Q 009516 292 TV--KKVCRVSLELGGNAPCIVFDDADLN--VAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVG 366 (533)
Q Consensus 292 ~~--k~~~~~~lElgG~~~~iV~~dAd~d--~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G 366 (533)
++ || +++|||||||+||++|||+| .|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.++++++++
T Consensus 244 ~l~~~p---v~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~- 319 (510)
T 1ez0_A 244 RPEPIP---FYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP- 319 (510)
T ss_dssp SSSCCC---EEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC-
T ss_pred cCCCcc---EEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC-
Confidence 85 88 99999999999999999999 99999999999999999999999999999 999999999999999875
Q ss_pred CCCCCCcccCcccCHHHHHHHHHHHHHHH-HCCCeEEeCCcccCCCCceeecEEeccCCCC---CcccccccccceEEEE
Q 009516 367 DGFGEGVVQGPLINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---MLVSREEVFGPVAPLL 442 (533)
Q Consensus 367 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~---~~~~~eE~FGPv~~v~ 442 (533)
||++++.+.+++.+++++++ ++|+++++||. . |+|++|||+.+++++ |++++||+||||++|+
T Consensus 320 ---------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-~---g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~ 386 (510)
T 1ez0_A 320 ---------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-E---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIV 386 (510)
T ss_dssp ---------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-C---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEE
T ss_pred ---------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-C---CCEecCEEEEecCCccccCHHHcCCccCCeEEEE
Confidence 68899999999999999998 48999999997 2 799999999988777 9999999999999999
Q ss_pred eeCCHHHHHHHHHcCCCCcEEEEEcCCH--HHHHHHHhhc--ceeEEEECCCCC---CCCCCCccC-cCCCCCCCC--Ch
Q 009516 443 CFKTEEEAIHMANDTNAGLAAYIFTNNL--QRTWRVSEAL--EYGLVGVNEGLI---STEVAPFGG-VKQSGLGRE--GS 512 (533)
Q Consensus 443 ~~~~~~eai~~~n~~~~gL~a~v~s~d~--~~~~~~a~~l--~~G~V~iN~~~~---~~~~~PfGG-~~~SG~G~~--gg 512 (533)
+|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+||||++.. ..+.+|||| +|.||+|+. +|
T Consensus 387 ~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G 466 (510)
T 1ez0_A 387 VCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVG 466 (510)
T ss_dssp EESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSS
T ss_pred EeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCcc
Confidence 9999999999999999999999999987 7999999999 799999998764 346899999 799999865 89
Q ss_pred HHHHHhhheeeEEE
Q 009516 513 KYGMDEFLEIKYVC 526 (533)
Q Consensus 513 ~~~l~~~~~~k~v~ 526 (533)
++|+++|++.|++.
T Consensus 467 ~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 467 AEAIHRWLRPVAYQ 480 (510)
T ss_dssp GGGGGGGEEEEEEE
T ss_pred HHHHHHhheEEEEc
Confidence 99999999999764
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=3.1e-91 Score=793.88 Aligned_cols=434 Identities=26% Similarity=0.428 Sum_probs=410.5
Q ss_pred EeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHH
Q 009516 86 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165 (533)
Q Consensus 86 v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~ 165 (533)
++.++.+|++.|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++..|+..++++++||+.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCcc--cCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHc
Q 009516 166 EAKRVYGEI--IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 243 (533)
Q Consensus 166 ~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~a 243 (533)
.+++..+.. .+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.||+++..+++++.++
T Consensus 624 ~a~~~~g~~~~~~~-~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eA 702 (1001)
T 3haz_A 624 QGRKLFGSETAMPG-PTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA 702 (1001)
T ss_dssp HHHHHHSSCEECCC-CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhcCccccccC-CCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHh
Confidence 998877653 222 23677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcC---ccccceeeecCCCCCcEEEccCCCHHHH
Q 009516 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---VKKVCRVSLELGGNAPCIVFDDADLNVA 320 (533)
Q Consensus 244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~---~k~~~~~~lElgG~~~~iV~~dAd~d~a 320 (533)
|+|+|++|+|+|++.+ ++.|+.||+|++|+||||+.+|+.|++.++++ +|| +++|+|||||+||++|||+|.|
T Consensus 703 GlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~p---v~lElGGknp~IV~~dADld~A 778 (1001)
T 3haz_A 703 GIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVP---LIAETGGINAMIADATALPEQV 778 (1001)
T ss_dssp TCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCC---EEEECCCCEEEEECTTSCHHHH
T ss_pred CcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCce---EEeecCCcceEEEcCCCCHHHH
Confidence 9999999999998877 99999999999999999999999999998865 566 9999999999999999999999
Q ss_pred HHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCe
Q 009516 321 VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAK 400 (533)
Q Consensus 321 a~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~ 400 (533)
++.+++++|.|+||.|+|++|||||++++|+|+++|+++++++++|+|.++++++||+++..+.+++.++|++++.+| +
T Consensus 779 a~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~ 857 (1001)
T 3haz_A 779 ADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-R 857 (1001)
T ss_dssp HHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-E
T ss_pred HHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-e
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999888 8
Q ss_pred EEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCC--HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHh
Q 009516 401 VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 478 (533)
Q Consensus 401 v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~ 478 (533)
+ +||..+ .+|+|++|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+++.++++
T Consensus 858 v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~ 933 (1001)
T 3haz_A 858 L-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIID 933 (1001)
T ss_dssp E-EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHH
T ss_pred E-eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHH
Confidence 8 888765 3589999999985 7889999999999999999996 79999999999999999999999999999999
Q ss_pred hcceeEEEECCCCCCC--CCCCccCcCCCCCC-CCChHHHHHhhheeeEEEEec
Q 009516 479 ALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 479 ~l~~G~V~iN~~~~~~--~~~PfGG~~~SG~G-~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++++|+||||++.... +.+||||+|.||+| ++||++++++|++.|+|+++.
T Consensus 934 ~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 934 RVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred hCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999999999987643 57899999999999 569999999999999999864
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=4e-85 Score=695.82 Aligned_cols=405 Identities=16% Similarity=0.140 Sum_probs=339.9
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CCC
Q 009516 73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQ-------GKP 145 (533)
Q Consensus 73 ~v~~P~tg~~l~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~-------Gk~ 145 (533)
-++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred HH----HHhHHHHHHHHHHHHHHHHHHHHhCcccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCC
Q 009516 146 LK----EAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 219 (533)
Q Consensus 146 ~~----~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN 219 (533)
+. ++..|+..+++.++||++.+++..+...+.. .++...++.++|+|||++|+||| |...+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 98 4678999999999999998877766543321 13456789999999999999888 88777 89999999999
Q ss_pred EEEEecCCCchHHHHHHHHHHHHc----CCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccc
Q 009516 220 TVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (533)
Q Consensus 220 ~VVlKps~~tp~~~~~l~~ll~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~ 295 (533)
+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.++ +||
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~p 243 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIP 243 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSC
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCC
Confidence 999999999999999999999999 9 9999999999 6788999999999999999999999999999887 788
Q ss_pred cceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCccc
Q 009516 296 VCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 375 (533)
Q Consensus 296 ~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 375 (533)
+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++||
T Consensus 244 ---v~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------- 294 (463)
T 2h5g_A 244 ---VMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------- 294 (463)
T ss_dssp ---BCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------
T ss_pred ---EEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------
Confidence 999999999999999999999999999999999 999999999999999998
Q ss_pred CcccCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHH
Q 009516 376 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 455 (533)
Q Consensus 376 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n 455 (533)
||+ +++++++++++|++++.|+... ..++|+ +++|++++||+||||++|++|+|+||||+++|
T Consensus 295 ~p~--------~~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN 357 (463)
T 2h5g_A 295 TPL--------FDQIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIH 357 (463)
T ss_dssp SHH--------HHHHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHH
T ss_pred hHH--------HHHHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHH
Confidence 343 2345788889999998555422 223443 57899999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCC--CC--ChHHHHHhhheeeEEEEec
Q 009516 456 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--RE--GSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 456 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G--~~--gg~~~l~~~~~~k~v~~~~ 529 (533)
+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|+||+| ++ +|++|+++||+.|+|+++.
T Consensus 358 ~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 358 KYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred cCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 99999999999999999999999999999999998777788999999999999 75 9999999999999998763
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=2.2e-82 Score=675.60 Aligned_cols=394 Identities=19% Similarity=0.180 Sum_probs=327.2
Q ss_pred HHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHh-HHHHH-HHHHHHHHHHH
Q 009516 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV-GEVDY-GAKFIEFYAEE 166 (533)
Q Consensus 93 dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~Ev~~-~~~~l~~~a~~ 166 (533)
.+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .+++ .|+.. ++..++|+++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999 8885 89998 99999999998
Q ss_pred HHHHh------CcccCCC-C-CCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHH
Q 009516 167 AKRVY------GEIIPAT-L-PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 238 (533)
Q Consensus 167 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ 238 (533)
+++.. +...+.. . .+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 88765 4432311 1 2456789999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEE
Q 009516 239 LAL----Q----AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCI 310 (533)
Q Consensus 239 ll~----~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~i 310 (533)
++. + +|+|+|++|+|+ ++.++++.|+.||+|++|+||||+.+|+.|++.+ +|| +++|||||||+|
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kp---v~lElGGk~p~i 245 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIP---VLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSC---BTTBCSCCEEEE
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCC---EEeecCCccceE
Confidence 995 8 999999999999 6668899999999999999999999999999876 677 999999999999
Q ss_pred EccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc---CCCCCCCcccCcccCHHHHHHH
Q 009516 311 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKV 387 (533)
Q Consensus 311 V~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gpli~~~~~~~~ 387 (533)
|++|||+|.|++.+++++|.|+| .|++++|+|||+++ |+|+++|.++++++++ |||.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999987 87643
Q ss_pred HHH-HHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEE
Q 009516 388 ETF-VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 466 (533)
Q Consensus 388 ~~~-i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~ 466 (533)
.++ +++++ ++++||. | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 344 56554 4667774 4 789997 78899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEECCCCCCCCCCCcc-----CcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 467 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFG-----GVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 467 s~d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfG-----G~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+|.++++++++++++|+||||++....+..||| |+|.||+|++ |++++++|++.|+|+++
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~ 439 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRG 439 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEEC
Confidence 9999999999999999999999987777789999 9999999999 99999999999999876
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=4.9e-81 Score=666.49 Aligned_cols=417 Identities=18% Similarity=0.248 Sum_probs=370.3
Q ss_pred EEeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-HHHHHHHHHHHH
Q 009516 85 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFY 163 (533)
Q Consensus 85 ~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~ 163 (533)
+++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. +...+++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 3455678999999999999999999999999999999999999999999999999999999988764 344444444333
Q ss_pred HHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHH----HH
Q 009516 164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA----EL 239 (533)
Q Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~----~l 239 (533)
.... +..+. ++ ..++...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++ ++
T Consensus 85 ~~~~-~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 IKDM-KTIGM-LK-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HTTC-CCSEE-EE-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhcc-cccce-ec-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 2211 11121 11 123567889999999999999999999999999999999999999999999999998765 45
Q ss_pred HHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCC-CCCcEEEccCCCHH
Q 009516 240 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELG-GNAPCIVFDDADLN 318 (533)
Q Consensus 240 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElg-G~~~~iV~~dAd~d 318 (533)
+.++|+|+|++|+|++++.+.++.|+.||+|++|+||||+.+ ++.+++++|| + +|+| ||+|+||++|||++
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kp---v-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTP---A-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSC---E-EEBCCCCCEEEECTTSCHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCc---E-EeeCCCCCeEEECCCCCHH
Confidence 688999999999999987899999999999999999999984 5666778888 8 7888 99999999999999
Q ss_pred HHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHh-------hcCccCCCC-CCCcccCcccCHHHHHHHHHH
Q 009516 319 VAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV-------KNLKVGDGF-GEGVVQGPLINKAALEKVETF 390 (533)
Q Consensus 319 ~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~~G~p~-~~~~~~Gpli~~~~~~~~~~~ 390 (533)
.|++.+++++|+|+||.|++++|||||+++||+|+++|+++. +++++|+|. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986 467889998 789999999999999999999
Q ss_pred HHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHH----HHHHcCCCCcEEEEE
Q 009516 391 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI----HMANDTNAGLAAYIF 466 (533)
Q Consensus 391 i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai----~~~n~~~~gL~a~v~ 466 (533)
++.++.+|+++++||.. ++++++++. ||+||||++|++|+|+|||| +++|+++|||+++||
T Consensus 314 ~~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~ 378 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIH 378 (464)
T ss_dssp TTCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred hhhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 99888899999999853 456788765 89999999999999999997 799999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEECCCCC---------CCCCCCccCcCCCCCCCCChHHHHHhhheeeEEEEe
Q 009516 467 TNNLQRTWRVSEALEYGLVGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 528 (533)
Q Consensus 467 s~d~~~~~~~a~~l~~G~V~iN~~~~---------~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v~~~ 528 (533)
|+|.++++++++++++|+||||++.. ..+.+|||| +.+|.|.++|..++++|++.|+|..+
T Consensus 379 t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 379 SEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp CSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999999864 467899998 78899999999999999999999764
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=4.3e-80 Score=652.25 Aligned_cols=387 Identities=20% Similarity=0.220 Sum_probs=345.6
Q ss_pred HHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHh--------HHHHHHHH
Q 009516 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV--------GEVDYGAK 158 (533)
Q Consensus 91 ~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~Ev~~~~~ 158 (533)
-+++++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999986 5554 69999999
Q ss_pred HHHHHHHHHHHHhCcccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009516 159 FIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236 (533)
Q Consensus 159 ~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l 236 (533)
.++||++++++ .+...+.. ..+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999987654 44433321 12455788999999999999886 478999999999999999999999999999999
Q ss_pred HHHHH----HcCCCCCceecccCC-hhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEE
Q 009516 237 AELAL----QAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311 (533)
Q Consensus 237 ~~ll~----~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV 311 (533)
++++. ++|+|+|++|+|+|. ..+.++.|..||+|++|+||||+.+|+.|++.+ .|| +++|||||||+||
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~---v~lELGGk~p~iV 243 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVP---VLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSC---BCCCCCCCEEEEE
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCC---EEEecCCCceEEE
Confidence 99998 689999999999984 466888999999999999999999999999887 477 9999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHH
Q 009516 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 391 (533)
Q Consensus 312 ~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 391 (533)
++|||+|.|++.+++++|.|+| .|+|++|+|||+++||+|+++|.+++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999988652
Q ss_pred HHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009516 392 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 471 (533)
Q Consensus 392 ~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 471 (533)
+.||... .+ |+ ||| ++.++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 298 ----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 360 (427)
T 1o20_A 298 ----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYS 360 (427)
T ss_dssp ----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred ----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHH
Confidence 2233221 12 34 885 3467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCC----CCChHHHHHhhheeeEEEEec
Q 009516 472 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 472 ~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G----~~gg~~~l~~~~~~k~v~~~~ 529 (533)
++.++++++++|+||||++....+.+||||.|+||+| +++|++++++||+.|+|+++.
T Consensus 361 ~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 361 NAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 9999999999999999997776778999999999997 468999999999999998864
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.5e-79 Score=651.25 Aligned_cols=389 Identities=20% Similarity=0.203 Sum_probs=335.4
Q ss_pred HHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHh--------HHHHHHHH
Q 009516 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EAV--------GEVDYGAK 158 (533)
Q Consensus 91 ~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~Ev~~~~~ 158 (533)
.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||+.. +++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999853 554 37899999
Q ss_pred HHHHHHHHHHHHhCcccCCC--CCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHH
Q 009516 159 FIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236 (533)
Q Consensus 159 ~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l 236 (533)
.++|++++.+. .+...+.. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 105 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 99999987643 34333321 23567889999999999999998 8 58899999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCceecccCChh-hHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEE
Q 009516 237 AELA----LQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIV 311 (533)
Q Consensus 237 ~~ll----~~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV 311 (533)
++++ .++|+|+|++|+|+|.+. ++++.|..||+|++|+||||+.+|+.+++.+ +|| +++|||||||+||
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~p---v~lELGGk~p~IV 255 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVP---MIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSC---BCCCCCCCCEEEE
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCC---EEEEcCCcCeEEE
Confidence 9997 799999999999998554 5788888999999999999999999998876 577 9999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCcc---CCCCCCCcccCcccCHHHHHHHH
Q 009516 312 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVE 388 (533)
Q Consensus 312 ~~dAd~d~aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gpli~~~~~~~~~ 388 (533)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 7653 13
Q ss_pred HHHHHHHHCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009516 389 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 468 (533)
Q Consensus 389 ~~i~~a~~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~ 468 (533)
++++++. + | ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 374 (444)
T 4ghk_A 318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTE 374 (444)
T ss_dssp HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECS
T ss_pred HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 5555431 1 1 12 3467899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEECCCCCCCCCCCccCcCCCCCC----CCChHHHHHhhheeeEEEEec
Q 009516 469 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 529 (533)
Q Consensus 469 d~~~~~~~a~~l~~G~V~iN~~~~~~~~~PfGG~~~SG~G----~~gg~~~l~~~~~~k~v~~~~ 529 (533)
|.+++.++++++++|+|+||++....+..||||.|+||+| +++|++|+++||+.|+|+++.
T Consensus 375 d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 375 DHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp BHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999999998877788999999999998 689999999999999998863
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.6e-77 Score=637.37 Aligned_cols=409 Identities=19% Similarity=0.248 Sum_probs=341.6
Q ss_pred EeCCCHHHHHHHHHHHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhH-HHHHHHHHH-HHH
Q 009516 86 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFI-EFY 163 (533)
Q Consensus 86 v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l-~~~ 163 (533)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.+ +||
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999986 777777776 454
Q ss_pred HHHHHHHhCcccCCCCCCceeEEEeeeceEEEEEcCCCcchHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHH--
Q 009516 164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL-- 241 (533)
Q Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~-- 241 (533)
+. .+..+. ++ ..++...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.
T Consensus 81 ~~--~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--cccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 43 122221 11 1234567889999999999999999999999999999999999999999999999998888875
Q ss_pred --HcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHH
Q 009516 242 --QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNV 319 (533)
Q Consensus 242 --~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~ 319 (533)
++|+|+|++|+|++++.+.++.|+.||+|++|+||||+.++ +.+++++|| +++|+|||+|+||++|||++.
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp---~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKP---AIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSC---EEECC--CEEEEECTTSCHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCC---EEecCCCCCeEEEeCCCCHHH
Confidence 78999999999999888999999999999999999999854 456678888 999999999999999999999
Q ss_pred HHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCC
Q 009516 320 AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 399 (533)
Q Consensus 320 aa~~i~~~~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 399 (533)
|++.++.++|+|+||.|++++|+|||+++||+|+++|+++ .||++++++.+++.++++++...|+
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999999999999875 2999999999999999987666677
Q ss_pred eEEeCCcccC---CCCceeecEE-------eccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCC----CCcEEEE
Q 009516 400 KVLLGGRRHS---LGMTFYEPTV-------LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN----AGLAAYI 465 (533)
Q Consensus 400 ~v~~gg~~~~---~~~~~~~Ptv-------l~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~----~gL~a~v 465 (533)
++ +||.... ..|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++|
T Consensus 295 ~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i 372 (452)
T 3my7_A 295 KI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGL 372 (452)
T ss_dssp GG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred eE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEE
Confidence 76 4765421 2479999997 778999999875 89999999999999999999999985 9999999
Q ss_pred EcCCHHHHHH---HHhhcceeEEEECCCCCCCCCCCccCcCCC-----------CCCCCChH-----HHHHhhheeeEEE
Q 009516 466 FTNNLQRTWR---VSEALEYGLVGVNEGLISTEVAPFGGVKQS-----------GLGREGSK-----YGMDEFLEIKYVC 526 (533)
Q Consensus 466 ~s~d~~~~~~---~a~~l~~G~V~iN~~~~~~~~~PfGG~~~S-----------G~G~~gg~-----~~l~~~~~~k~v~ 526 (533)
||+|.+++++ ++.++++|+|+||++. ||||.+.. |.|..||- -+.+++.+.|+|.
T Consensus 373 ~t~d~~~a~~i~~~a~~l~~G~V~VN~~~------~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~ 446 (452)
T 3my7_A 373 YTNQDVNADRIRYFGDKMKTARILINIPT------THGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVA 446 (452)
T ss_dssp ESCTTTCHHHHHHHHHHCCCSEEEESCCC------C----------------------------CCCCCGGGGEEEEEEE
T ss_pred EcCCHHHHHHHHHHHHhCCEEEEEECCCC------CCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEE
Confidence 9999887777 9999999999999864 46655532 44455443 3556666777665
Q ss_pred Ee
Q 009516 527 LG 528 (533)
Q Consensus 527 ~~ 528 (533)
.+
T Consensus 447 ~~ 448 (452)
T 3my7_A 447 KR 448 (452)
T ss_dssp CC
T ss_pred ee
Confidence 43
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.63 E-value=0.075 Score=54.10 Aligned_cols=258 Identities=17% Similarity=0.195 Sum_probs=151.5
Q ss_pred CCCceeEEEeeeceEEEEEcCC---CcchHHHHHHHHHHhhcCCE--EEEecCCCchHHHHHHHHHHHHcCCCCCceecc
Q 009516 179 LPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCT--VVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253 (533)
Q Consensus 179 ~~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~--VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v 253 (533)
.+|.....++.|+--|++-.|. .||... +....||-.+|+. |+.-|++.. .....+.-..+.+|+.. +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EE
Confidence 4577788899999999999994 366544 4457899999996 333444322 12223344457778764 22
Q ss_pred cCChhhHHhHHhc----CCCeeEEEeeCCHHHHHHHHHHhhcCccccceeeec-CCCCCcEEEc--cCCCHHHHHHHHHH
Q 009516 254 MGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSLE-LGGNAPCIVF--DDADLNVAVNGALA 326 (533)
Q Consensus 254 ~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~lE-lgG~~~~iV~--~dAd~d~aa~~i~~ 326 (533)
.-.|.+.-.+|.- -|.||+|+=.|..-+...=..-.. . +-.. .-|.+=++|. ++||.++.+.+++.
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g-~------VgIDm~AGPSEilViAD~~a~p~~vAaDLls 264 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG-Q------VGIDMVAGPSEILVISDGRTDPDWIAMDLFS 264 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT-T------BEECCCCCCCEEEEEECSCSCHHHHHHHHHH
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC-C------cCcccccccceEEEEeCCCCCHHHHHHHHHH
Confidence 2224443344443 578999999998887543322222 1 2222 2355554444 45899999999988
Q ss_pred HHhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeC
Q 009516 327 AKFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 404 (533)
Q Consensus 327 ~~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 404 (533)
.+=.... .+.++|.. .+.++..+.+.+.++.+. .. +...+-++.
T Consensus 265 QAEHd~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l~---------------r~---~i~~~sl~~----------- 310 (423)
T 4gic_A 265 QAEHDED-----AQAILISPDAAHLEAVQASIERLLPGME---------------RA---EVIRTSLER----------- 310 (423)
T ss_dssp HHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHGGGCT---------------TH---HHHHHHHHH-----------
T ss_pred hhccCCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhCc---------------cH---HHHHHHHhc-----------
Confidence 8765432 33455644 444555555555555442 11 111111110
Q ss_pred CcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ee
Q 009516 405 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YG 483 (533)
Q Consensus 405 g~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G 483 (533)
+| .++.++|.+|+++++|..-.= -.-|.++|.. .+..+++ +|
T Consensus 311 ------------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAG 353 (423)
T 4gic_A 311 ------------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAG 353 (423)
T ss_dssp ------------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCS
T ss_pred ------------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEec
Confidence 11 245679999999999984222 4566788875 5777777 99
Q ss_pred EEEECCCCC---C------CCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 484 LVGVNEGLI---S------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 484 ~V~iN~~~~---~------~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
.|++..++. + +..+|-+| ..|+.+..+.+.|+..-++
T Consensus 354 aIFlG~~tp~~~GDY~aG~NHvLPT~G-----~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 354 AIFMGRYTAEALGDYCAGPNHVLPTSG-----TARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp EEEEC----------------CCCCTT-----GGGTCCCCCGGGGEEEEEE
T ss_pred eeecCCCCchhhhhcCcCCCccCCCCC-----cccccCCCCHHHeeeeeeE
Confidence 999976543 1 23566555 4555555577888876544
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.34 E-value=0.18 Score=51.50 Aligned_cols=256 Identities=20% Similarity=0.246 Sum_probs=153.5
Q ss_pred CCceeEEEeeeceEEEEEcCC---CcchHHHHHHHHHHhhcCCEEEE--ecCCCchHHHHHHHHHHHHcCCCCCceeccc
Q 009516 180 PDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM 254 (533)
Q Consensus 180 ~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VVl--Kps~~tp~~~~~l~~ll~~aGlP~gvv~~v~ 254 (533)
+|.....++.|+--|++-.|. -||... +....||-.+|+.=|+ -|+.-.| .+.-..+.+|+.. ++. +
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~i~p----~iL~AA~l~Gv~e-Iy~-v- 184 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPPIAD----EILYAAQLCGVQD-VFN-V- 184 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTHHH-HHHHHHHHHHTCSEEEEEECSSCCH----HHHHHHHHTTCCE-EEE-C-
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchhHH-HHhhccHhhcCCCeEEEECCCCCCH----HHHHHHHHcCCCE-Eee-c-
Confidence 366667789999999999996 466544 4557899999986544 4442233 2334457788764 222 2
Q ss_pred CChhhHHhHHhc----CCCeeEEEeeCCHHHHHHHHHHhhcCccccceeee-cCCCCCcEEEc--cCCCHHHHHHHHHHH
Q 009516 255 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVCRVSL-ELGGNAPCIVF--DDADLNVAVNGALAA 327 (533)
Q Consensus 255 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~~~~~k~~~~~~l-ElgG~~~~iV~--~dAd~d~aa~~i~~~ 327 (533)
| |.+.-.+|.- -|+||+|+=.|..-+...=..-.... .. +-. -.-|.+=++|. ++||.++.+.+++..
T Consensus 185 G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~-G~---VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQ 259 (434)
T 1kae_A 185 G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DG---AAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 259 (434)
T ss_dssp C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCT-TS---CEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhc-Cc---cccCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 3 4443334432 47899999888877643322211001 11 222 22355555544 458999999999888
Q ss_pred HhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhcCccCCCCCCCcccCcccCHHHHHHHHHHHHHHHHCCCeEEeCC
Q 009516 328 KFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 405 (533)
Q Consensus 328 ~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg 405 (533)
+=...- .+.++|.. ...++..+.+.+.+..+. . . +.++.++
T Consensus 260 AEHd~~-----a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~ia~~sl---------- 302 (434)
T 1kae_A 260 AEHGPD-----SQVILLTPAADMARRVAEAVERQLAELP---------------R---A----ETARQAL---------- 302 (434)
T ss_dssp HTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHTTCT---------------T---H----HHHHHHH----------
T ss_pred hccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHH----------
Confidence 765432 33455544 444555555555554441 0 0 1112211
Q ss_pred cccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-eeE
Q 009516 406 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGL 484 (533)
Q Consensus 406 ~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~ 484 (533)
..- .|+.++|.||+++++|..-.= -.-|.++|.. .+..+++ +|.
T Consensus 303 ------------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGa 347 (434)
T 1kae_A 303 ------------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGS 347 (434)
T ss_dssp ------------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSE
T ss_pred ------------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccc
Confidence 112 356779999999999984332 4567788874 5677776 999
Q ss_pred EEECCCCC---------CCCCCCccCcCCCCCCCCChHHHHHhhheeeEE
Q 009516 485 VGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 525 (533)
Q Consensus 485 V~iN~~~~---------~~~~~PfGG~~~SG~G~~gg~~~l~~~~~~k~v 525 (533)
|++..++. .+..+|-+|. .|+.|..+.+.|+..-++
T Consensus 348 IFlG~~tpe~~GDY~aG~NHvLPT~G~-----AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 348 VFLGDWSPESAGDYASGTNHVLPTYGY-----TATCSSLGLADFQKRMTV 392 (434)
T ss_dssp EEESTTCCHHHHHHTSSSCCCCCCTTG-----GGTCCCSCGGGGEEEEEE
T ss_pred hhcCCCCchhhcccccCCCcccCCCCc-----eeccCCCcHHhccceeeE
Confidence 99997654 2346776654 455555678888876554
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=57.86 E-value=28 Score=27.67 Aligned_cols=61 Identities=18% Similarity=0.158 Sum_probs=39.6
Q ss_pred cCHHHHHHHHHHHHHHH-HCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcC
Q 009516 379 INKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 457 (533)
Q Consensus 379 i~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~ 457 (533)
.+++.+++..+....++ +-|++++..|... .++.+.. .|-+.|+.|+|.+.+.++.|+-
T Consensus 15 ~d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~~---------~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~ 74 (99)
T 2fiu_A 15 RDSERYKDYVSTAKPAFERFGANFLARGGSV---------TELEGTA-----------RARNVVIEFPSVQHAIDCYNSP 74 (99)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEESCCE---------EEEESCC-----------CSEEEEEEESSHHHHHHHHHSH
T ss_pred CCHHHHHHHHHHHHHHHHHcCcEEEEECCCc---------eEEecCC-----------cCeEEEEECCCHHHHHHHHcCH
Confidence 34555555555555444 3688888876442 3444311 2367899999999999999875
Q ss_pred CC
Q 009516 458 NA 459 (533)
Q Consensus 458 ~~ 459 (533)
+|
T Consensus 75 ~Y 76 (99)
T 2fiu_A 75 EY 76 (99)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=57.35 E-value=24 Score=30.67 Aligned_cols=114 Identities=11% Similarity=0.011 Sum_probs=75.6
Q ss_pred eEEEEEcCCCc-chHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH-cCCCCCceecccC-ChhhHHhHHhcCC
Q 009516 192 GVAGAITPWNF-PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVMG-NAPDIGDALLTSP 268 (533)
Q Consensus 192 GVv~~I~p~N~-P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~-aGlP~gvv~~v~g-~~~~~~~~L~~~~ 268 (533)
|.|+++..-+- +-...+.+-...+.+|-.++-= .-| ++.|.+ .|+|-..++=++. ..+++++. +.+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gT----a~~L~e~~Gl~v~~v~k~~eGG~p~I~d~-I~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTT----GNLISRATGMNVNAMLSGPMGGDQQVGAL-ISEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTH----HHHHHHHHCCCCEEECCGGGTHHHHHHHH-HHTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHH----HHHHHHHhCceeEEEEecCCCCCchHHHH-HHCC
Confidence 65555544433 5555555666777788887752 223 455666 8999888876653 23456554 5567
Q ss_pred CeeEEEeeCC-------HHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccC
Q 009516 269 QVRKITFTGS-------TAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 333 (533)
Q Consensus 269 ~v~~V~ftGs-------~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~G 333 (533)
+|+.|+||-+ ..-+..|.+.+.....| +..-+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP---~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIP---VATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCC---EESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHHcCCC---EEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999977 45788899998877666 55332 367777777777653
No 57
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=52.99 E-value=19 Score=32.09 Aligned_cols=120 Identities=11% Similarity=-0.033 Sum_probs=79.2
Q ss_pred EEeeec-eEEEEEcCCCc-chHHHHHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH-cCCCCCceecccC-ChhhHH
Q 009516 186 VLKQPV-GVAGAITPWNF-PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVMG-NAPDIG 261 (533)
Q Consensus 186 ~~~~P~-GVv~~I~p~N~-P~~~~~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~-aGlP~gvv~~v~g-~~~~~~ 261 (533)
...-|. |.|+++..-+- +-...+.+-...+.+|..++. |.-| ++.|.+ .|+|-..++=++. ..++++
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gT----a~~L~e~~Gl~v~~v~k~~eGG~pqI~ 91 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTT----GALLQEKLGLKVHRLKSGPLGGDQQIG 91 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHH----HHHHHHHHCCCCEECSCGGGTHHHHHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHH----HHHHHHHhCceeEEEeecCCCCCchHH
Confidence 333443 76666655443 666666666677888998775 3334 455666 8999877775553 234565
Q ss_pred hHHhcCCCeeEEEeeCC-------HHHHHHHHHHhhcCccccceeeecCCCCCcEEEccCCCHHHHHHHHHHHHhhccC
Q 009516 262 DALLTSPQVRKITFTGS-------TAVGKKLMAGAAGTVKKVCRVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 333 (533)
Q Consensus 262 ~~L~~~~~v~~V~ftGs-------~~~g~~i~~~~~~~~k~~~~~~lElgG~~~~iV~~dAd~d~aa~~i~~~~f~~~G 333 (533)
+ ++.+.+|+.|+||-+ ..-+..|.+.+.....| +..-+ ..++.++.+.+++..
T Consensus 92 d-~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP---~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 92 A-MIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIP---VAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp H-HHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCC---EESSH---------------HHHHHHHHSGGGGSC
T ss_pred H-HHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCC---EEeCH---------------HHHHHHHHHHhcccc
Confidence 5 455678999999977 23578899888877666 55332 367788888877653
No 58
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=48.61 E-value=30 Score=27.24 Aligned_cols=62 Identities=16% Similarity=0.158 Sum_probs=41.3
Q ss_pred cCHHHHHHHHHHHHHHHH-CCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHcC
Q 009516 379 INKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 457 (533)
Q Consensus 379 i~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~~ 457 (533)
.+++.+++..+....+++ -|++++..| .. .++.+.. -..-+.|+.|+|.+.+.++.|+-
T Consensus 14 ~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~~---------~~lEG~~----------~~~~~viieFps~~aa~a~y~Sp 73 (94)
T 3lo3_A 14 KDAEKLQQYGARVASTLAKYSGEVLVKG-SV---------EQLHGKF----------EHKAQVILEFPSREDAYNWYHSE 73 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCEEEEEE-EC---------EEEESCC----------CCSEEEEEEESSHHHHHHHHHSH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEc-cc---------ccccCCC----------CCCeEEEEECCCHHHHHHHHCCH
Confidence 355566666666555554 488888877 43 3444310 12567899999999999999986
Q ss_pred CCC
Q 009516 458 NAG 460 (533)
Q Consensus 458 ~~g 460 (533)
+|.
T Consensus 74 eYq 76 (94)
T 3lo3_A 74 EYQ 76 (94)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=46.20 E-value=24 Score=30.10 Aligned_cols=63 Identities=6% Similarity=-0.002 Sum_probs=45.3
Q ss_pred HHHHHHcCCCCCceecccCC-h----hhHHhHHhcCCCeeEEEeeCCH-----HHHHHHHHHhhcCccccceeeecC
Q 009516 237 AELALQAGIPPGVVNVVMGN-A----PDIGDALLTSPQVRKITFTGST-----AVGKKLMAGAAGTVKKVCRVSLEL 303 (533)
Q Consensus 237 ~~ll~~aGlP~gvv~~v~g~-~----~~~~~~L~~~~~v~~V~ftGs~-----~~g~~i~~~~~~~~k~~~~~~lEl 303 (533)
++.|.+.|+|-..++-++.. . +++.+. +.+.+|+.|++|-+. .-+..|++.+.....| ++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~-i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP---~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKL-IRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIP---LLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHH-HHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCC---EECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHH-HHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCC---eEcCH
Confidence 45667899999888877643 2 456555 456679999998665 3678888888877766 66543
No 60
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=45.56 E-value=16 Score=31.07 Aligned_cols=77 Identities=10% Similarity=0.050 Sum_probs=49.5
Q ss_pred HHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHH-cCCCCCceeccc-CChhhHHhHHhcCCCeeEEEeeCC-------H
Q 009516 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQ-AGIPPGVVNVVM-GNAPDIGDALLTSPQVRKITFTGS-------T 279 (533)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~-aGlP~gvv~~v~-g~~~~~~~~L~~~~~v~~V~ftGs-------~ 279 (533)
-+-...+.+|..++- |.-| ++.|.+ .|+|-..++=++ +..+++++. +.+.+|+.|+||-+ .
T Consensus 22 a~~~~~ll~Gf~l~A-----T~gT----a~~L~e~~Gl~v~~v~k~~~eG~p~I~d~-I~~geIdlVInt~~pl~~~~h~ 91 (134)
T 2xw6_A 22 CQRHREVLARFPLVA-----TGTT----GRRIEEATGLTVEKLLSGPLGGDQQMGAR-VAEGRILAVIFFRDPLTAQPHE 91 (134)
T ss_dssp HHHTHHHHTTSCEEE-----CHHH----HHHHHHHHCCCCEECSCGGGTHHHHHHHH-HHTTCEEEEEEECCTTTCCTTS
T ss_pred HHHHHHHhCCCEEEE-----ccHH----HHHHHHhhCceEEEEEecCCCCcchHHHH-HHCCCccEEEEccCcccCCCcc
Confidence 333445555665553 2333 355666 799988887776 534566655 45668999999987 2
Q ss_pred HHHHHHHHHhhcCccc
Q 009516 280 AVGKKLMAGAAGTVKK 295 (533)
Q Consensus 280 ~~g~~i~~~~~~~~k~ 295 (533)
.-+..|.+.+.....|
T Consensus 92 ~D~~~IrR~A~~~~IP 107 (134)
T 2xw6_A 92 PDVQALLRVCDVHGVP 107 (134)
T ss_dssp CCSHHHHHHHHHHTCC
T ss_pred chHHHHHHHHHHcCCC
Confidence 3457788877765555
No 61
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=41.04 E-value=84 Score=26.00 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHCCCeEEeCCcccC-CCCcee-----ecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHH
Q 009516 382 AALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFY-----EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 455 (533)
Q Consensus 382 ~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~~~~~-----~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n 455 (533)
+..+...+++++..+.|. ++.|+...+ ..+..+ +|+|.+++-.+ ..|..|= +.|+.++|.|||++++.
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~ 103 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAA 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHH
Confidence 345566667776666664 444332221 112222 24555553322 2456554 56779999999999998
Q ss_pred cCCCC
Q 009516 456 DTNAG 460 (533)
Q Consensus 456 ~~~~g 460 (533)
..++.
T Consensus 104 ~~P~~ 108 (124)
T 1s7i_A 104 KIPPG 108 (124)
T ss_dssp TCGGG
T ss_pred hCCcc
Confidence 87654
No 62
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=34.66 E-value=72 Score=27.19 Aligned_cols=66 Identities=12% Similarity=0.025 Sum_probs=43.7
Q ss_pred ccCHHHHHHHHHHHHHHH-HCCCeEEeCCcccCCCCceeecEEeccCCCCCcccccccccceEEEEeeCCHHHHHHHHHc
Q 009516 378 LINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 456 (533)
Q Consensus 378 li~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~v~~~~~~~eai~~~n~ 456 (533)
+.+++.+++..+....++ .-|++++..|... .++.+... |. ..-+.|+.|+|.+.+.++.|+
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~~---------~~lEG~~~-------e~-~~~~viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQFE---------LMLIGPQD-------EH-WDHVFIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---------EEEESCTT-------CC-CSEEEEEEESCHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCCc---------eeEECCCC-------CC-CCeEEEEECCCHHHHHHHHcC
Confidence 456666766666666554 3688888877553 34444211 11 146789999999999999887
Q ss_pred CCCC
Q 009516 457 TNAG 460 (533)
Q Consensus 457 ~~~g 460 (533)
-+|.
T Consensus 108 peYq 111 (143)
T 3hhl_A 108 PVYR 111 (143)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6443
No 63
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=33.68 E-value=39 Score=31.33 Aligned_cols=70 Identities=13% Similarity=0.127 Sum_probs=47.3
Q ss_pred HHHHHHHhhcCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcCCCeeEEEeeCCHHHHHHH
Q 009516 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285 (533)
Q Consensus 208 ~~~l~~ALaaGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 285 (533)
+..++-.+..||-||++.+. +.....+..+|... +|.+.+++++.+ .+- ...-.-..+.++.+..+...+
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~iP~~v 90 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQIPPHV 90 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCCCCHHH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCcccCccc
Confidence 55678889999999999876 33455567778887 999999998652 221 112235566666665554443
No 64
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=31.57 E-value=22 Score=31.17 Aligned_cols=50 Identities=24% Similarity=0.318 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcC--CCeeEEEeeCCHHHH
Q 009516 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS--PQVRKITFTGSTAVG 282 (533)
Q Consensus 232 ~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~--~~v~~V~ftGs~~~g 282 (533)
....|.+++.+.|+..-...+++.+ .++.++|.+. .+.|.|..||++..+
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 4567888899999877777788887 7776665442 357889999998753
No 65
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=28.68 E-value=64 Score=28.27 Aligned_cols=52 Identities=19% Similarity=0.094 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHcCCCCCceecccCChhhHHhHHh---cCCCeeEEEeeCCHHH
Q 009516 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL---TSPQVRKITFTGSTAV 281 (533)
Q Consensus 230 p~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~---~~~~v~~V~ftGs~~~ 281 (533)
-.....|++.|.+.|+.--...+++.+...+.+++. ...+.|.|+.||++..
T Consensus 39 D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred cchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 345677899999999987667777776555555543 3456899999999874
No 66
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=27.97 E-value=1.3e+02 Score=21.49 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=25.3
Q ss_pred HHHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 100 ~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
.++.....|+.++.++|........+.-.++..++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556789999999998877766665555555543
No 67
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=25.78 E-value=25 Score=31.57 Aligned_cols=52 Identities=29% Similarity=0.250 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcC--CCeeEEEeeCCHHHH
Q 009516 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS--PQVRKITFTGSTAVG 282 (533)
Q Consensus 231 ~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~--~~v~~V~ftGs~~~g 282 (533)
.....|.+++.+.|+..-...+++.+...+.+.|... .+.|.|..||++..+
T Consensus 49 sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g 102 (185)
T 3rfq_A 49 HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVT 102 (185)
T ss_dssp SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 3556788999999987777777887666666555442 468899999998854
No 68
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=24.95 E-value=81 Score=23.81 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=29.3
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCC
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 256 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~ 256 (533)
++|-+|+|..|-. +..++.++.+.++|. ++-.+.|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999988776 667888899987776 88887774
No 69
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=24.92 E-value=77 Score=23.41 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=29.3
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCC
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 256 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~ 256 (533)
++|-+|+|..|-. +..++.++.+.++|. ++-.+.|+
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 6899999988766 667888899997776 88887774
No 70
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=24.84 E-value=92 Score=25.57 Aligned_cols=83 Identities=11% Similarity=0.116 Sum_probs=52.4
Q ss_pred HHHHHHHHhhccCCcccc--CCeEEEehhhHHHHHHHHHHHhhcCccCCCCCCCcc-------cCcccCHHHHHHHHHHH
Q 009516 321 VNGALAAKFRNSGQTCVC--ANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV-------QGPLINKAALEKVETFV 391 (533)
Q Consensus 321 a~~i~~~~f~~~GQ~C~a--~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~-------~Gpli~~~~~~~~~~~i 391 (533)
+...+.......+-.|.. ....|++...++++.+.+.+.+..+.--+|+.++.. ..|-++..- +..++
T Consensus 34 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~---~~~ll 110 (135)
T 2v9v_A 34 TRKLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARV---YQALL 110 (135)
T ss_dssp HHHHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHH---HHHHH
T ss_pred HHHHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHH---HHHHH
Confidence 444455555444444444 234489999999999999999998766666665532 223233333 45666
Q ss_pred HHHHHCCCeEEeCCc
Q 009516 392 EDAVSKGAKVLLGGR 406 (533)
Q Consensus 392 ~~a~~~Ga~v~~gg~ 406 (533)
+..+++|.-...|+.
T Consensus 111 ~~l~~~g~l~~~~~~ 125 (135)
T 2v9v_A 111 EEWSREGRLQLAANT 125 (135)
T ss_dssp HHHHHTTSEEECSSE
T ss_pred HHHHHCCCEEecCCE
Confidence 777778877766654
No 71
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=22.15 E-value=43 Score=29.30 Aligned_cols=52 Identities=21% Similarity=0.238 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHcCCCCCceecccCChhhHHhHHhc---CCCeeEEEeeCCHHHH
Q 009516 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT---SPQVRKITFTGSTAVG 282 (533)
Q Consensus 231 ~~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~---~~~v~~V~ftGs~~~g 282 (533)
.....|.+.|.+.|+......+++.+...+.++|.. +.+.|.|..||++..+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 455678888999998766667777765565555433 2368899999998753
No 72
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.92 E-value=1.7e+02 Score=22.05 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=24.5
Q ss_pred HHHhhHHhccCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009516 101 AFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (533)
Q Consensus 101 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (533)
++.....|+.|+.++|..........-+++..++.
T Consensus 49 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 49 SKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455679999999998877766665555555543
No 73
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=21.72 E-value=79 Score=24.12 Aligned_cols=36 Identities=17% Similarity=0.163 Sum_probs=29.2
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCC
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 256 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~ 256 (533)
++|-+|+|..|-. +..++.++.+.++|. ++-.+.|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999988776 667888899887776 78777764
No 74
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=20.51 E-value=24 Score=35.83 Aligned_cols=52 Identities=17% Similarity=0.182 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHcCCCCCceecccCChhhHHhHHhcC-CCeeEEEeeCCHHHHH
Q 009516 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS-PQVRKITFTGSTAVGK 283 (533)
Q Consensus 232 ~~~~l~~ll~~aGlP~gvv~~v~g~~~~~~~~L~~~-~~v~~V~ftGs~~~g~ 283 (533)
....|..++.+.|...-.+.+++.+...+.+.|.+. .+.|.|..||++.++.
T Consensus 212 n~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 212 NSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred hHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 445688889999987666677777655554444321 1478899999998764
No 75
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=20.35 E-value=68 Score=24.23 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=30.3
Q ss_pred cCCEEEEecCCCchHHHHHHHHHHHHcCCCCCceecccCC
Q 009516 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN 256 (533)
Q Consensus 217 aGN~VVlKps~~tp~~~~~l~~ll~~aGlP~gvv~~v~g~ 256 (533)
++|-+|+|..|-. +..++.++.+.+.+++++-.+.|+
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecC
Confidence 6899999988766 667888888887888899888775
Done!