BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009517
(533 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/476 (77%), Positives = 414/476 (86%)
Query: 58 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITF 117
VD+LNPKVLKCEYAVRGEIV AQRLQ++L+T PGS FDEILYCNIGNPQSLGQQP+TF
Sbjct: 25 VDNLNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTF 84
Query: 118 FREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177
FREVLALCDHP +L R E + LFSADSI RA QIL IPGRATGAYSHSQGI GLRD IA
Sbjct: 85 FREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIA 144
Query: 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGG 237
+GI +RDGFPA+ +DIFLTDGASP VH+MMQLLIR+E DGIL PIPQYPLYSASIALHGG
Sbjct: 145 SGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGG 204
Query: 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297
LVPYYL+E+TGWGLETS+VKKQLE A+++GI VRALVVINPGNPTGQVLAEENQ IV
Sbjct: 205 ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVK 264
Query: 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357
FCK EGLVLLADEVYQEN+YV KKFHSFKK+ RS+GYGE+D+ LVS+QSVSKGYYGECG
Sbjct: 265 FCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG 324
Query: 358 KRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417
KRGGY E+TGFSA VREQIYK+ASVNLCSNI+GQILASLVM+PPK DESY SY AE+DG
Sbjct: 325 KRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDG 384
Query: 418 ILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFYCR 477
IL+SLARRAK LE AFN LEGITCN+AEGAMY+FP+I LP PDAFY
Sbjct: 385 ILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYAL 444
Query: 478 RLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKFRN 533
RLL +TGIV+VPGSGFGQVPGTWHFRCTILPQEDKIPA+++R T FH+ FM ++R+
Sbjct: 445 RLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSEYRD 500
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/479 (45%), Positives = 306/479 (63%), Gaps = 11/479 (2%)
Query: 58 VDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITF 117
++S+NP+V EYAVRG IV A ++ ELQ F E++ NIG+ Q++GQQPITF
Sbjct: 25 LESMNPQVKAVEYAVRGPIVLKAGEIELELQRGI-KKPFTEVIRANIGDAQAMGQQPITF 83
Query: 118 FREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177
R+V+ALC +P++LD F D+ +RA +IL G + G+YS SQG+ +R+ +A
Sbjct: 84 LRQVMALCTYPNLLDSPS----FPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVA 139
Query: 178 AGIEARDG-FPADPNDIFLTDGASPAVHMMMQLLIR---SENDGILCPIPQYPLYSASIA 233
A I RDG PADP++I+LT GAS + ++++L+ G++ PIPQYPLYSA I+
Sbjct: 140 AYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVIS 199
Query: 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293
V YYLDE W L +E+++ ++ AK + L +INPGNPTGQV + +
Sbjct: 200 ELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQVQSRKCIE 258
Query: 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG-YGEKDISLVSFQSVSKGY 352
++ F +E L LLADEVYQ+NVY P+ +FHSFKKV MG ++ L SF S SKGY
Sbjct: 259 DVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGY 318
Query: 353 YGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYC 412
GECG RGGYMEV E++ Q+ K+ SV LC +SGQ +V++PP G+ES+E +
Sbjct: 319 MGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFS 378
Query: 413 AERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPD 472
E++ +L +LA++AK ED FN + GI CN +GAMY FPRI +P PD
Sbjct: 379 REKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPD 438
Query: 473 AFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKF 531
FYC +LL TGI +VPGSGFGQ GT+HFR TILP +K+ ++ ++ DFH NF++K+
Sbjct: 439 MFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEKY 497
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 196/465 (42%), Gaps = 81/465 (17%)
Query: 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLA 123
+ L EYA+R ++V A+ L+++ +++ NIG+P QP +E A
Sbjct: 15 RALSVEYAIR-DVVLPARELEKKGI---------KVIRLNIGDPVKFDFQPPEHMKE--A 62
Query: 124 LCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEAR 183
C ++ +G Y S+G+ LR I + +
Sbjct: 63 YC-------KAIKEG---------------------HNYYGDSEGLPELRKAIVEREKRK 94
Query: 184 DGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYY 243
+G P+D+ +T + A+ ++ L+ D IL P P YP Y+ + +GG V Y
Sbjct: 95 NGVDITPDDVRVTAAVTEALQLIFGALL-DPGDEILVPGPSYPPYTGLVKFYGGKPVEYR 153
Query: 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303
E W + +++K++ +A+ VINP NPTG + ++ I++ +
Sbjct: 154 TIEEEDWQPDIDDIRKKITD------RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYE 207
Query: 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 363
+ +++DE+Y Y E S G KD+ ++ +SK Y+ G R GYM
Sbjct: 208 IPVISDEIYDLMTYEGE---------HISPGSLTKDVPVIVMNGLSKVYFA-TGWRLGYM 257
Query: 364 ---EVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420
+ +EVRE I ++A + LC N Q A ++ P Y E +
Sbjct: 258 YFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPM-------DYLKE---YMK 307
Query: 421 SLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFYCRRLL 480
L R + N + GI+ K +GA Y+FP+I++ D + +L
Sbjct: 308 KLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKN----------DKEFVLDVL 357
Query: 481 NATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHK 525
+ ++ V GSGFG+ G HFR LP + + + R F K
Sbjct: 358 HNAHVLFVHGSGFGEY-GAGHFRAVFLPPIEILEEAMDRFEKFMK 401
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 160/361 (44%), Gaps = 43/361 (11%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCP 221
Y + G+ LR+ IA ++ ++G ADP +I + GA+ A M + ++ + + +L P
Sbjct: 58 YGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLK-DGEEVLIP 116
Query: 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281
P + Y+ ++ L GG V E + L E+KK + RAL++ +P N
Sbjct: 117 TPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD------KTRALIINSPCN 170
Query: 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341
PTG VL +++ I DF + L++++DEVY+ +Y + + ++ G E+ I+
Sbjct: 171 PTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYS----IASLDGMFERTIT 226
Query: 342 LVSFQSVSKGYYGECGKRGGYMEVTGFSAE--VREQIYKVASVNLCSNISGQILASLVMS 399
+ F + G R G++ + E V+ Q+Y C Q A+ +
Sbjct: 227 VNGFSKT----FAMTGWRLGFVAAPSWIIERMVKFQMYNAT----CPVTFIQYAAAKALK 278
Query: 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXX 459
+ ++ E E D RR K + N + G+ K +GA Y+FPRI+
Sbjct: 279 DERSW-KAVEEMRKEYD-------RRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIR---- 325
Query: 460 XXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTR 519
+ + +L + +VPGS FG+ G + R + +K+ + R
Sbjct: 326 -------DTGLTSKKFSELMLKEARVAVVPGSAFGKA-GEGYVRISYATAYEKLEEAMER 377
Query: 520 L 520
+
Sbjct: 378 M 378
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 160/361 (44%), Gaps = 43/361 (11%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCP 221
Y + G+ LR+ IA ++ ++G ADP +I + GA+ A M + ++ + + +L P
Sbjct: 59 YGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLK-DGEEVLIP 117
Query: 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281
P + Y+ ++ L GG V E + L E+KK + RAL++ +P N
Sbjct: 118 TPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD------KTRALIINSPCN 171
Query: 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341
PTG VL +++ I DF + L++++DEVY+ +Y + + ++ G E+ I+
Sbjct: 172 PTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYS----IASLDGMFERTIT 227
Query: 342 LVSFQSVSKGYYGECGKRGGYMEVTGFSAE--VREQIYKVASVNLCSNISGQILASLVMS 399
+ F + G R G++ + E V+ Q+Y C Q A+ +
Sbjct: 228 VNGFSKT----FAMTGWRLGFVAAPSWIIERMVKFQMYNAT----CPVTFIQYAAAKALK 279
Query: 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXX 459
+ ++ E E D RR K + N + G+ K +GA Y+FPRI+
Sbjct: 280 DERSW-KAVEEMRKEYD-------RRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIR---- 326
Query: 460 XXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTR 519
+ + +L + +VPGS FG+ G + R + +K+ + R
Sbjct: 327 -------DTGLTSKKFSELMLKEARVAVVPGSAFGKA-GEGYVRISYATAYEKLEEAMDR 378
Query: 520 L 520
+
Sbjct: 379 M 379
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 41/350 (11%)
Query: 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVH 204
+E A L+Q R Y + G LR+ IA ++ +G ++I +T+G ++
Sbjct: 49 VEAAKAALEQGKTR----YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIF 104
Query: 205 MMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264
+M +I D ++ P P + Y + L GT V T + + ++++ +
Sbjct: 105 NLMLAMIEP-GDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP- 162
Query: 265 KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324
+ LV P NPTG V + RAI + GL +L+DE+Y++ +Y + H
Sbjct: 163 -----KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILY--DDAQH 215
Query: 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNL 384
+ Y E+ + F Y G R G++ + +I ++ N+
Sbjct: 216 LSIGAASPEAY-ERSVVCSGFAKT----YAMTGWRVGFLAGPVPLVKAATKIQGHSTSNV 270
Query: 385 CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKA 444
C+ +A +YE+ +L++ A R + + DA N++ G+ C K
Sbjct: 271 CTFAQYGAIA------------AYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKP 318
Query: 445 EGAMYLFPRIQLPXXXXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGFG 494
+GA Y+FP I +C LL+ + VPG+ FG
Sbjct: 319 DGAFYMFPSIAKTGRSSLD-----------FCSELLDQHQVATVPGAAFG 357
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 158/375 (42%), Gaps = 34/375 (9%)
Query: 158 RATGAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSEN 215
+A + G+ R IA +E G DP + + GA+ A ++ +
Sbjct: 74 KAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETII-FCLADPG 132
Query: 216 DGILCPIPQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRAL 274
D L P P YP ++ + G L+P + + + + + + VK+ E A+ I V+ L
Sbjct: 133 DAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGL 192
Query: 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV--SRS 332
++ NP NP G L ++ ++++ F + + L+ DE+Y V+ +F S ++ +
Sbjct: 193 ILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVF-DTPQFVSIAEILDEQE 251
Query: 333 MGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQI 392
M Y KD+ + + S+SK G G R G + F+ +V K++S L S +
Sbjct: 252 MTYCNKDLVHIVY-SLSKD-MGLPGFRVGI--IYSFNDDVVNCARKMSSFGLVSTQTQYF 307
Query: 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAF-NSLE--GITCNKAEGAMY 449
LA++ + DE + D L A R F N LE GI C K ++
Sbjct: 308 LAAM------LSDEKF------VDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLF 355
Query: 450 LFPRIQLPXXXXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGFG-QVPGTWHFRCTILP 508
+ ++ P ++ R ++N + + PGS F Q PG W C
Sbjct: 356 CWMDLR-PLLRESTFDSEMSL-----WRVIINDVKLNVSPGSSFECQEPG-WFRVCFANM 408
Query: 509 QEDKIPAIVTRLTDF 523
+ + + R+ F
Sbjct: 409 DDGTVDIALARIRRF 423
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 150/367 (40%), Gaps = 61/367 (16%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV-HMMMQLLIRSENDGILCP 221
Y+ +GI LR+ IA I R P+ + +T+GA A+ + M LL D ++
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALL--DPGDEVIVF 131
Query: 222 IPQYPLYSASIALHGGTL--VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279
P + Y I L GGT+ V ++ + LE E L K K A+++ +P
Sbjct: 132 SPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVE---GLLVGKTK-----AVLINSP 183
Query: 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339
NPTG V E +V KK +++DEVY VY E F S VS
Sbjct: 184 NNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE--FTSILDVSEGFD----- 236
Query: 340 ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVM 398
+V SK + G R GY+ S +V + K+ S C N Q A +
Sbjct: 237 -RIVYINGFSKS-HSMTGWRVGYLIS---SEKVATAVSKIQSHTTSCINTVAQYAALKAL 291
Query: 399 SPPKVGDESY--ESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQL 456
D SY +++ ++ ++ L + G+ + EGA YLF +++
Sbjct: 292 EV----DNSYMVQTFKERKNFVVERLKKM------------GVKFVEPEGAFYLFFKVR- 334
Query: 457 PXXXXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAI 516
D +C RLL + LVPGS F + PG R + +++
Sbjct: 335 -------------GDDVKFCERLLEEKKVALVPGSAFLK-PG--FVRLSFATSIERLTEA 378
Query: 517 VTRLTDF 523
+ R+ DF
Sbjct: 379 LDRIEDF 385
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
YSHS GI LR+ A+ + R P ++ +T+G S A+ + +I + D IL
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAI-LFSFAVIANPGDEILVLE 133
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA---AKAKGITVRALVVINP 279
P Y Y+A + G L+P G+ + + LE+ + KGI V+ NP
Sbjct: 134 PFYANYNAFAKIAGVKLIPVTRRXEEGFA-----IPQNLESFINERTKGI-----VLSNP 183
Query: 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317
NPTG V ++ R +V+ ++ GL L+ DEVY E V+
Sbjct: 184 CNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVF 221
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 164/385 (42%), Gaps = 58/385 (15%)
Query: 150 QILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209
+I+++ +A Y ++G LR+T+ + R G D NDI +T G+ A+ ++ ++
Sbjct: 57 EIMEKYADKAL-QYGTTKGFTPLRETLMKWLGKRYGISQD-NDIMITSGSQQALDLIGRV 114
Query: 210 LIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269
+ + D ++ P Y + + + LD+ G++ ++++L+ K++G
Sbjct: 115 FL-NPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---GMKVEILEEKLKELKSQGK 170
Query: 270 TVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV--PEKKFHSF 326
V+ + + NP G + E+ ++ +++ + +++ D+ Y E Y PEKK +
Sbjct: 171 KVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKAL 230
Query: 327 KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCS 386
R I L +F + G R G+M G +R+ S +LC+
Sbjct: 231 DNEGRV-------IYLGTFSKILA-----PGFRIGWM--VGDPGIIRKMEIAKQSTDLCT 276
Query: 387 NISGQILASLVMSP---PKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK 443
N+ GQ++A + K E + Y RD +L +L + F EG+ K
Sbjct: 277 NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEAL--------EEFMP-EGVKWTK 327
Query: 444 AEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFYCRRLLN---ATGIVLVPGSGF---GQVP 497
EG M+++ T+PD +++L G+ VPG F V
Sbjct: 328 PEGGMFIW----------------VTLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVK 371
Query: 498 GTWHFRCTILPQEDKIPAIVTRLTD 522
T T + EDKI + RL +
Sbjct: 372 NTMRLNFTYV-DEDKIMEGIKRLAE 395
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 162/385 (42%), Gaps = 58/385 (15%)
Query: 150 QILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209
+I+++ +A Y ++G LR+T+ + R G D NDI +T G+ A+ ++ ++
Sbjct: 102 EIMEKYADKAL-QYGTTKGFTPLRETLMKWLGKRYGISQD-NDIMITSGSQQALDLIGRV 159
Query: 210 LIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269
+ + D ++ P Y + + + LD+ G++ ++++L+ K++G
Sbjct: 160 FL-NPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---GMKVEILEEKLKELKSQGK 215
Query: 270 TVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV--PEKKFHSF 326
V+ + + NP G + E+ ++ +++ + +++ D+ Y E Y PEKK +
Sbjct: 216 KVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKAL 275
Query: 327 KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCS 386
R I L +F + G R G+M G +R+ S +LC+
Sbjct: 276 DNEGRV-------IYLGTFSKILA-----PGFRIGWM--VGDPGIIRKMEIAKQSTDLCT 321
Query: 387 NISGQILASLVMSP---PKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNK 443
N+ GQ++A + K E + Y RD +L +L EG+ K
Sbjct: 322 NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMP---------EGVKWTK 372
Query: 444 AEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFYCRRLLN---ATGIVLVPGSGF---GQVP 497
EG M+++ T+PD +++L G+ VPG F V
Sbjct: 373 PEGGMFIW----------------VTLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVK 416
Query: 498 GTWHFRCTILPQEDKIPAIVTRLTD 522
T T + EDKI + RL +
Sbjct: 417 NTMRLNFTYV-DEDKIMEGIKRLAE 440
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 136/306 (44%), Gaps = 35/306 (11%)
Query: 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216
G+ G Y+ S G R+ IA+ + P + D+ LT G S A+ + + +L +
Sbjct: 87 GKYNG-YAPSIGFLSSREEIASYYHCPEA-PLEAKDVILTSGCSQAIDLCLAVL-ANPGQ 143
Query: 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVV 276
IL P P + LY G + Y L W ++ +++ ++ A L+V
Sbjct: 144 NILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTA------CLIV 197
Query: 277 INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336
NP NP G V ++ + + I+ ++ + +LADE+Y + V+ + K+ +S
Sbjct: 198 NNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVF-SDCKYEPLATLS------ 250
Query: 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTG----FSAEVREQIYKVASVNL--CSNISG 390
D+ ++S ++K + G R G++ + F E+R+ + K++ L C+ + G
Sbjct: 251 -TDVPILSCGGLAKRWLVP-GWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQG 308
Query: 391 QILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYL 450
+ + L +P E Y + LS L A A ++ G+ + GAMYL
Sbjct: 309 ALKSILCRTP----GEFYHN-------TLSFLKSNADLCYGALAAIPGLRPVRPSGAMYL 357
Query: 451 FPRIQL 456
I++
Sbjct: 358 MVGIEM 363
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 150/388 (38%), Gaps = 72/388 (18%)
Query: 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA 199
F +++ RA DQ Y+ G+ LR+ +A + F +P + +T GA
Sbjct: 42 FLLEAVRRALGRQDQ--------YAPPAGLPALREALA------EEFAVEPESVVVTSGA 87
Query: 200 SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETSEVK 258
+ A+++++Q L+ D ++ P + +Y L G LD G+ L+ S ++
Sbjct: 88 TEALYVLLQSLV-GPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALE 146
Query: 259 KQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318
K L RAL++ P NPTG V E AI + L L++DEVY E
Sbjct: 147 KALTP------RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDE---- 196
Query: 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378
+ YGE+ L F G GKR +E TG+ +
Sbjct: 197 --------------LYYGERPRRLREFAPERTFTVGSAGKR---LEATGYRVG-----WI 234
Query: 379 VASVNLCSNISGQILASLVMSPPKVGDESYESY-CAERDGILSSL----ARRAKTLEDAF 433
V ++G + +P + E+ A R+G +L RR L
Sbjct: 235 VGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGL 294
Query: 434 NSLEGITCNKAEGAMYLFPRIQLPXXXXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGF 493
++ G+ EG +L +LP DAF RL+ + L+P S F
Sbjct: 295 RAM-GLRVYVPEGTYFLM--AELPGW------------DAF---RLVEEARVALIPASAF 336
Query: 494 G-QVPGTWHFRCTILPQEDKIPAIVTRL 520
+ P FR E+++ + RL
Sbjct: 337 YLEDPPKDLFRFAFCKTEEELHLALERL 364
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 159/373 (42%), Gaps = 45/373 (12%)
Query: 157 GRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216
G+ G Y+ S G R+ +A+ + P + D+ LT G S A+ + + +L +
Sbjct: 64 GKYNG-YAPSIGYLSSREEVASYYHCPEA-PLEAKDVILTSGCSQAIELCLAVL-ANPGQ 120
Query: 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVV 276
IL P P + LY G + Y L W ++ +++ ++ A LVV
Sbjct: 121 NILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTA------CLVV 174
Query: 277 INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336
NP NP G V ++ + + I+ +++ + +LADE+Y + V+ + K+ +S
Sbjct: 175 NNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVF-SDCKYEPMATLS------ 227
Query: 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTG----FSAEVREQIYKVASVNL--CSNISG 390
++ ++S ++ + G R G++ + F E+R+ + K++ L C+ + G
Sbjct: 228 -TNVPILSCGGLAXRWLVP-GWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQG 285
Query: 391 QILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYL 450
+ + L +P E Y+ LS L A A +++ G+ + GAMYL
Sbjct: 286 ALKSILQRTP----QEFYQD-------TLSFLKSNADLCYGALSAIPGLQPVRPSGAMYL 334
Query: 451 FPRIQLPXXXXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQE 510
I++ D + RL+ + +P + F + P FR I E
Sbjct: 335 MVGIEMEHFPEFEN-------DVEFTERLIAEQSVHCLPATCF-EYPN--FFRVVITVPE 384
Query: 511 DKIPAIVTRLTDF 523
+ +R+ +F
Sbjct: 385 VMMLEACSRIQEF 397
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 163/395 (41%), Gaps = 47/395 (11%)
Query: 107 PQS-LGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSH 165
PQS L Q T F ++ AL ++ S QG D + L + Y+
Sbjct: 8 PQSKLPQLGTTIFTQMSALAQQHQAINLS--QGFPDFDGPRYLQERLAHHVAQGANQYAP 65
Query: 166 SQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ 224
G++ LR+ IA E G+ D + DI +T GA+ A++ + L+R+ D ++C P
Sbjct: 66 MTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRN-GDEVICFDPS 124
Query: 225 YPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN-PGNPT 283
Y Y+ +IAL GG + L+ + + A LV++N P NP+
Sbjct: 125 YDSYAPAIALSGGIV--------KRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPS 176
Query: 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343
V + + A+ + +++DEVY E++ ++ S + + + V
Sbjct: 177 ATVWQQADFAALWQAIAGHEIFVISDEVY-EHINFSQQGHASV------LAHPQLRERAV 229
Query: 344 SFQSVSKGYYGECGKRGGYMEVTGFSAEVRE-QIYKVASVNLCSNISGQILASLVMSPPK 402
+ S K Y+ K G + SAE+R+ Y SVN + ++ LA ++ + P+
Sbjct: 230 AVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLA---LADMLRAEPE 286
Query: 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXX 462
+ Y +RD ++++L + LE + C EG +L
Sbjct: 287 HYLALPDFYRQKRDILVNALNE---------SRLEILPC---EGTYFLL----------V 324
Query: 463 XXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVP 497
T+ D +C+ L G+ +P S F P
Sbjct: 325 DYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADP 359
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT-LVPYYLDEA 247
DPN + LT GA+ A + + + +L P P YP + + G +VP + +
Sbjct: 110 DPNHLVLTAGATSANETFI-FCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSS 168
Query: 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307
G+ + + +++ + A+ + + V+ ++V NP NP G + ++ F + +G+ L+
Sbjct: 169 NGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLI 228
Query: 308 ADEVY 312
+DE+Y
Sbjct: 229 SDEIY 233
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT-LVPYYLDEA 247
DPN + LT GA+ A + + + +L P P YP + + G +VP + +
Sbjct: 108 DPNHLVLTAGATSANETFI-FCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSS 166
Query: 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307
G+ + + +++ + A+ + + V+ ++V NP NP G + ++ F + +G+ L+
Sbjct: 167 NGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLI 226
Query: 308 ADEVY 312
+DE+Y
Sbjct: 227 SDEIY 231
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT-LVPYYLDEA 247
DPN + LT GA+ A + + + +L P P YP + + G +VP + +
Sbjct: 110 DPNHLVLTAGATSANETFI-FCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSS 168
Query: 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307
G+ + + +++ + A+ + + V+ ++V NP NP G + ++ F + +G+ L+
Sbjct: 169 NGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLI 228
Query: 308 ADEVY 312
+DE+Y
Sbjct: 229 SDEIY 233
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT-LVPYYLDEA 247
DPN + LT GA+ A + + + +L P P YP + + G +VP + +
Sbjct: 93 DPNHLVLTAGATSANETFI-FCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSS 151
Query: 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307
G+ + + +++ + A+ + + V+ ++V NP NP G + ++ F + +G+ L+
Sbjct: 152 NGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLI 211
Query: 308 ADEVY 312
+DE+Y
Sbjct: 212 SDEIY 216
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 151/368 (41%), Gaps = 69/368 (18%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPAD--PNDIFLTDGASPAVHMMMQLLIRSENDGILC 220
Y+ S+GI LR+ I+ +D + AD P++I +T G+S + + +I + D +L
Sbjct: 62 YTDSRGILELREKISEL--YKDKYKADIIPDNIIITGGSSLGLFFALSSII-DDGDEVLI 118
Query: 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280
P YP Y I G P + D + +E+ E EA K +A+++ +P
Sbjct: 119 QNPCYPCYKNFIRFLGAK--PVFCD----FTVESLE-----EALSDK---TKAIIINSPS 164
Query: 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDI 340
NP G+V+ R I +F + +++DE+Y VY E K +S + ++ EK I
Sbjct: 165 NPLGEVI----DREIYEFAYENIPYIISDEIYNGLVY--EGKCYSAIEFDENL---EKTI 215
Query: 341 SLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSP 400
+ F + Y G R GY+ E+ E I K+ +L +S
Sbjct: 216 LINGFSXL----YAMTGWRIGYVISND---EIIEAILKLQQ-------------NLFISA 255
Query: 401 PKVGD----ESYESYCA-ERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQ 455
P + +++E E + ++ RR + + G N GA Y+FP I
Sbjct: 256 PTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNNPIGAYYVFPNIG 314
Query: 456 LPXXXXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPA 515
+ +LL + L PG GFG G + R + + I
Sbjct: 315 EDGRE--------------FAYKLLKEKFVALTPGIGFGS-KGKNYIRISYANSYENIKE 359
Query: 516 IVTRLTDF 523
+ R+ +F
Sbjct: 360 GLERIKEF 367
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 134/358 (37%), Gaps = 43/358 (12%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y+ GI LR+ +A +G P + +T G S A+ + Q ++ D ++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVIVLS 122
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282
P + Y + GG +V G+ + V++ + +ALVV +P NP
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNP 176
Query: 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342
TG V +E A+ + L++DE+Y+ +Y E + S +V+
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY--EGEHFSPGRVAPE--------HT 226
Query: 343 VSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPK 402
++ +K + G R GY + +E I +ASV+ S S +A
Sbjct: 227 LTVNGAAKA-FAMTGWRIGY------ACGPKEVIKAMASVSRQSTTSPDTIAQWATLEAL 279
Query: 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXX 462
E+ ++ + + RR L + +L G+ + GA Y+
Sbjct: 280 TNQEASRAFV---EMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVL----------- 324
Query: 463 XXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRL 520
PD L G+ +VPG+ F H R + E+ + + R
Sbjct: 325 -MDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAF---GHVRLSYATSEENLRKALERF 378
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 134/358 (37%), Gaps = 43/358 (12%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y+ GI LR+ +A +G P + +T G S A+ + Q ++ D ++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVIVLS 122
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282
P + Y + GG +V G+ + V++ + +ALVV +P NP
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNP 176
Query: 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342
TG V +E A+ + L++DE+Y+ +Y E + S +V+
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY--EGEHFSPGRVAPE--------HT 226
Query: 343 VSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPK 402
++ +K + G R GY + +E I +ASV+ S S +A
Sbjct: 227 LTVNGAAKA-FAMTGWRIGY------ACGPKEVIKAMASVSRQSTTSPDTIAQWATLEAL 279
Query: 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXX 462
E+ ++ + + RR L + +L G+ + GA Y+
Sbjct: 280 TNQEASRAFV---EMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVL----------- 324
Query: 463 XXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRL 520
PD L G+ +VPG+ F H R + E+ + + R
Sbjct: 325 -MDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAF---GHVRLSYATSEENLRKALERF 378
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 134/358 (37%), Gaps = 43/358 (12%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y+ GI LR+ +A +G P + +T G S A+ + Q ++ D ++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVIVLS 122
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282
P + Y + GG +V G+ + V++ + +ALVV +P NP
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNP 176
Query: 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342
TG V +E A+ + L++DE+Y+ +Y E + S +V+
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY--EGEHFSPGRVAPE--------HT 226
Query: 343 VSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPK 402
++ +K + G R GY + +E I +ASV+ S S +A
Sbjct: 227 LTVNGAAKA-FAMTGWRIGY------ACGPKEVIKAMASVSRQSTTSPDTIAQWATLEAL 279
Query: 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXX 462
E+ ++ + + RR L + +L G+ + GA Y+
Sbjct: 280 TNQEASRAFV---EMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVL----------- 324
Query: 463 XXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRL 520
PD L G+ +VPG+ F H R + E+ + + R
Sbjct: 325 -MDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAF---GHVRLSYATSEENLRKALERF 378
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 134/358 (37%), Gaps = 43/358 (12%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y+ GI LR+ +A +G P + +T G S A+ + Q ++ D ++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVIVLS 122
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282
P + Y + GG +V G+ + V++ + +ALVV +P NP
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNP 176
Query: 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342
TG V +E A+ + L++DE+Y+ +Y E + S +V+
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY--EGEHFSPGRVAPE--------HT 226
Query: 343 VSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPK 402
++ +K + G R GY + +E I +ASV+ S S +A
Sbjct: 227 LTVNGAAKA-FAMTGWRIGY------ACGPKEVIKAMASVSSQSTTSPDTIAQWATLEAL 279
Query: 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXX 462
E+ ++ + + RR L + +L G+ + GA Y+
Sbjct: 280 TNQEASRAFV---EMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVL----------- 324
Query: 463 XXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRL 520
PD L G+ +VPG+ F H R + E+ + + R
Sbjct: 325 -MDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAF---GHVRLSYATSEENLRKALERF 378
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 14/215 (6%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y ++ L + ++ + D DI +G PA+ + +Q + E + +L
Sbjct: 62 YGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTK-EGEAVLINS 120
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282
P YP ++ S+ L+ LV L E G E QLE + V+ ++ NP NP
Sbjct: 121 PVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFE---QLENDIVEN-DVKLYLLCNPHNP 176
Query: 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342
G+V E I C+K ++L++DE++Q+ + SF VS KD +L
Sbjct: 177 GGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHV-SFNTVSPDF----KDFAL 231
Query: 343 VSFQSVSKGYYGECGKRGGY--MEVTGFSAEVREQ 375
V S +K + G + Y +E A+ + Q
Sbjct: 232 V-LSSATKT-FNIAGTKNSYAIIENPTLCAQFKHQ 264
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 133/358 (37%), Gaps = 43/358 (12%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y+ GI LR+ +A +G P + +T G A+ + Q ++ D ++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAIL-DPGDEVIVLS 122
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282
P + Y + GG +V G+ + V++ + +ALVV +P NP
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNP 176
Query: 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342
TG V +E A+ + L++DE+Y+ +Y E + S +V+
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY--EGEHFSPGRVAPE--------HT 226
Query: 343 VSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPK 402
++ +K + G R GY + +E I +ASV+ S S +A
Sbjct: 227 LTVNGAAKA-FAMTGWRIGY------ACGPKEVIKAMASVSSQSTTSPDTIAQWATLEAL 279
Query: 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXX 462
E+ ++ + + RR L + +L G+ + GA Y+
Sbjct: 280 TNQEASRAFV---EMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVL----------- 324
Query: 463 XXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRL 520
PD L G+ +VPG+ F H R + E+ + + R
Sbjct: 325 -MDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAF---GHVRLSYATSEENLRKALERF 378
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 148/362 (40%), Gaps = 53/362 (14%)
Query: 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAV-HMMMQLLIRSENDG 217
T YS S+GI LR I+ R DP ++ +T G+ + H+M+ L D
Sbjct: 68 THGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATL--DHGDT 125
Query: 218 ILCPIPQYP--LYSASIA---LHGGTLVPYYLDEATGWGLE-TSEVKKQLEAAKAKGITV 271
IL P P YP +Y A IA + LVP G++ +E+++ + + K
Sbjct: 126 ILVPNPSYPIHIYGAVIAGAQVRSVPLVP---------GIDFFNELERAIRESIPKP--- 173
Query: 272 RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSR 331
R +++ P NPT Q + + +V K+ ++++ D Y + VY +K S
Sbjct: 174 RMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVY------DGWKAPSI 227
Query: 332 SMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQ 391
G KDI+ V F ++SK Y G R G+M +I + +
Sbjct: 228 MQVPGAKDIA-VEFFTLSKS-YNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVA 285
Query: 392 ILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLF 451
+A+L V D + + Y RD ++ K L +A G + +MY++
Sbjct: 286 AIAALEGDQQCVRDIARQ-YQQRRDVLV-------KGLREA-----GWMVENPKASMYVW 332
Query: 452 PRIQLPXXXXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQED 511
+I P + ++LL + + PG GFG G H R ++ D
Sbjct: 333 AKIPEPYAHLGSLE---------FAKKLLQDAKVSVSPGIGFGDY-GDDHVRFALIENRD 382
Query: 512 KI 513
++
Sbjct: 383 RL 384
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 135/358 (37%), Gaps = 43/358 (12%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y+ GI LR+ +A +G P + +T G A+ + Q ++ D ++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAIL-DPGDEVIVLS 122
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282
P + Y + GG +V G+ + V++ + +ALVV +P NP
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNP 176
Query: 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342
TG V +E A+ + L++DE+Y+ +Y E + S +V+ E +++
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY--EGEHFSPGRVA-----PEHTLTV 229
Query: 343 VSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPK 402
+ + + G R GY + +E I +ASV+ S S +A
Sbjct: 230 ----NGAAXAFAMTGWRIGY------ACGPKEVIKAMASVSSQSTTSPDTIAQWATLEAL 279
Query: 403 VGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXXXXX 462
E+ ++ + + RR L + +L G+ + GA Y+
Sbjct: 280 TNQEASRAFV---EMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVL----------- 324
Query: 463 XXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRL 520
PD L G+ +VPG+ F H R + E+ + + R
Sbjct: 325 -MDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAF---GHVRLSYATSEENLRKALERF 378
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 127/341 (37%), Gaps = 50/341 (14%)
Query: 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRSENDGILC 220
AY+ +G G+RD +A + A G P D D + +T G A+ + + + + D +
Sbjct: 73 AYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATV-ARGDKVAI 131
Query: 221 PIPQYPLYSASIALHGGTLVPYYLD----EATGWGLETSEVKKQLEAAKAKGITVRALVV 276
P Y + G VP LD + T GL+ + +++ +A R +
Sbjct: 132 VQPDYFANRKLVEFFEGEXVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLF 185
Query: 277 INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336
NP NP G V + E I + G ++AD++Y Y S+ +
Sbjct: 186 SNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGA----SYTHLRAEAAVD 241
Query: 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV----REQIYKVASVNLCSNISGQI 392
+++ + S ++ GY F + E++ + S+ + S +
Sbjct: 242 AENVVTIXGPSXTESL-------SGYRLGVAFGSRAIIARXEKLQAIVSLR-AAGYSQAV 293
Query: 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFP 452
L P ++ + A RD +L L EG+ + YLFP
Sbjct: 294 LRGWFDEAPGWXEDRIARHQAIRDELLHVL-----------RGXEGVFARTPQAGSYLFP 342
Query: 453 RIQLPXXXXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGF 493
R LP V A + + L G+V+ PG+ F
Sbjct: 343 R--LP---------KLAVAPAEFVKILRLQAGVVVTPGTEF 372
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG-W 250
DI DG PA+ + +Q + D +L P Y ++ +I L+ LV L G +
Sbjct: 121 DILFIDGVVPAISIALQAF-SEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRF 179
Query: 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310
++ +++K + V+ ++ +P NP G+V ++ I + CKK G++L++DE
Sbjct: 180 EIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDE 234
Query: 311 VYQE 314
++Q+
Sbjct: 235 IHQD 238
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 173/436 (39%), Gaps = 73/436 (16%)
Query: 119 REVLALCDHPSILDRSETQGL-----FSADSIER-AWQILDQIPGRATGAYSHSQGIKGL 172
RE+L L + ++ S GL F ++I++ A ++L++ +A Y ++G L
Sbjct: 32 RELLKLVETSDVI--SLAGGLPAPETFPVETIKKIAVEVLEEHADKAL-QYGTTKGFTPL 88
Query: 173 RDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI 232
R +A +E R P +I G+ A+ ++ ++ + + D I+ P Y +
Sbjct: 89 RLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFL-NPGDPIVVEAPTYLAAIQAF 147
Query: 233 ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEEN 291
+ + LD+ G+ ++++LE + +G V+ + ++ NP G ++ +
Sbjct: 148 KYYDPEFISIPLDDK---GMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDR 204
Query: 292 QRAIVDFCKKEGLVLLADEVYQENVYV-----PEKKFHSFKKVSRSMGYGEKDISLVSFQ 346
++ +++ + +++ D Y E Y P K F + +V I L +F
Sbjct: 205 RKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRV----------IYLGTFS 254
Query: 347 SVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA-------SLVMS 399
+ G R G+ V +R+ S++LC+N GQ +A L
Sbjct: 255 KILA-----PGFRIGW--VAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEH 307
Query: 400 PPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLPXX 459
PK+ E Y RD +L +L EG+ K EG M++ R+ LP
Sbjct: 308 IPKI----IEFYKPRRDAMLEALEEYMP---------EGVEWTKPEGGMFV--RVTLPEG 352
Query: 460 XXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGF---GQVPGTWHFRCTILPQEDKIPAI 516
V A G+ VPG F T T +P+E I
Sbjct: 353 IDTKLMMERAV-----------AKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEET-IREG 400
Query: 517 VTRLTDFHKNFMDKFR 532
V RL + K M + +
Sbjct: 401 VRRLAETIKEEMKRVK 416
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 159 ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218
A Y+ +QG R IA + G + ++++ T GA+ ++ + + L D
Sbjct: 68 ALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEF 127
Query: 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278
+ P +P Y + G LV D + ++ +++++ A R +++ +
Sbjct: 128 ITIAPYFPEYKVFVNAAGARLVEVPAD-TEHFQIDFDALEERINA------HTRGVIINS 180
Query: 279 PGNPTGQVLAEENQRAIVDFCKKEG------LVLLADEVYQENVY 317
P NP+G V +EE + + D +K+ + ++ADE Y+E VY
Sbjct: 181 PNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVY 225
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 201 PAVHMMMQLLIRSEND---GILCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETSE 256
P+V M+ LIR ++ G++ P Y + +I + T++P L+ +A GW +
Sbjct: 94 PSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMG- 152
Query: 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316
+LEA AK + +++ +P NPTG+V + + D C++ G+ +++DE++ + V
Sbjct: 153 ---KLEAVLAKP-ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMV 208
Query: 317 Y 317
+
Sbjct: 209 W 209
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 28/199 (14%)
Query: 163 YSHSQGIKGLRDTIAAGIEAR-DGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGI-- 218
Y + G+ LR A ++ R DG D N+I G+ A+ +Q ++ +DGI
Sbjct: 62 YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 219 --LCPIPQYPLYSASIALHGGTL------VPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270
+ P P Y +Y + L GG + P + + W + EV K+
Sbjct: 122 AIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPD---WRSISEEVWKR---------- 168
Query: 271 VRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330
+ + V +P NP+G VL + + + D K G ++ +DE Y E + K + +
Sbjct: 169 TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAA 228
Query: 331 RSMGYGEKDISLVSFQSVS 349
+ G L+ F S+S
Sbjct: 229 Q---LGRSRQKLLXFTSLS 244
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 16/187 (8%)
Query: 137 QGLFSAD----SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND 192
QG FS +I+ A + LD IP YS ++G L +++ +
Sbjct: 64 QGFFSYSPPQFAIKEAQKALD-IP--MVNQYSPTRGRPSLINSLIKLYSPIYNTELKAEN 120
Query: 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLV------PYYLDE 246
+ +T GA+ + + L+ + D ++ P + Y +I L GG +V P LD+
Sbjct: 121 VTVTTGANEGILSCLMGLLNA-GDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQ 179
Query: 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306
G E + +Q E KA +A+++ P NP G+V E + + C K +V+
Sbjct: 180 RNTRGEEWTIDFEQFE--KAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVI 237
Query: 307 LADEVYQ 313
++DEVY+
Sbjct: 238 ISDEVYE 244
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 189 DPND-IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD-- 245
DPN+ I + GA ++ +Q L+ D ++ +P Y Y + + G VP ++
Sbjct: 83 DPNEEILVAVGAYGSLFNSIQGLV-DPGDEVIIMVPFYDCYEPMVRMAGA--VPVFIPLR 139
Query: 246 ---------EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296
++ W + E++ + + +A+++ P NP G+V + + I
Sbjct: 140 SKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIILNTPHNPLGKVYTRQELQVIA 193
Query: 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344
D C K + ++DEVY+ VY H+ K++ G E+ I++ S
Sbjct: 194 DLCVKHDTLCISDEVYEWLVYTG----HTHVKIATLPGMWERTITIGS 237
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCP 221
Y+ + G L +A+ G DP ++ +T G A+ Q L+ E D ++
Sbjct: 63 YTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALV-DEGDEVIII 121
Query: 222 IPQYPLYSASIALHGGTLVPYYLD----------EATGWGLETSEVKKQLEAAKAKGITV 271
P + Y + GG V L ++ W L+ E+ + +
Sbjct: 122 EPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS------RT 175
Query: 272 RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317
+ALV+ P NP G+V + E + C++ +V + DEVYQ VY
Sbjct: 176 KALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVY 221
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 189 DPND-IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD-- 245
DPN+ I + GA ++ +Q L+ D ++ +P Y Y + + G VP ++
Sbjct: 83 DPNEEILVAVGAYGSLFNSIQGLV-DPGDEVIIMVPFYDCYEPMVRMAGA--VPVFIPLR 139
Query: 246 ---------EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296
++ W + E++ + + +A+++ P NP G+V + + I
Sbjct: 140 SKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIILNTPHNPLGKVYTRQELQVIA 193
Query: 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344
D C K + ++DEVY+ VY H+ K++ G E+ I++ S
Sbjct: 194 DLCVKHDTLCISDEVYEWLVYTG----HTHVKIATLPGMWERTITIGS 237
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCP 221
Y+ + G L +A+ G DP ++ +T G A+ Q L+ E D ++
Sbjct: 63 YTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALV-DEGDEVIII 121
Query: 222 IPQYPLYSASIALHGGTLVPYYLD----------EATGWGLETSEVKKQLEAAKAKGITV 271
P + Y + GG V L ++ W L+ E+ + +
Sbjct: 122 EPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS------RT 175
Query: 272 RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317
+ALV+ P NP G+V + E + C++ +V + DEVYQ VY
Sbjct: 176 KALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVY 221
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCP 221
Y+ + G L +A+ G DP ++ +T G A+ Q L+ E D ++
Sbjct: 63 YTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALV-DEGDEVIII 121
Query: 222 IPQYPLYSASIALHGGTLVPYYLD----------EATGWGLETSEVKKQLEAAKAKGITV 271
P + Y + GG V L ++ W L+ E+ + +
Sbjct: 122 EPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS------RT 175
Query: 272 RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317
+ALV+ P NP G+V + E + C++ +V + DEVYQ VY
Sbjct: 176 KALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVY 221
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 24/230 (10%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y+ + G+ LR IA G DP + +T G+S + L S D +
Sbjct: 64 YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDS-GDRVGIGA 122
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282
P YP Y + G LVP L A E + Q A G+ + L V +P NP
Sbjct: 123 PGYPSYRQILRALG--LVPVDLPTA-------PENRLQPVPADFAGLDLAGLXVASPANP 173
Query: 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISL 342
TG L A+++ + +G ++DE+Y H + ++++ E
Sbjct: 174 TGTXLDHAAXGALIEAAQAQGASFISDEIY-----------HGIEYEAKAVTALELTDEC 222
Query: 343 VSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQI 392
S SK Y+ G R G+ V V E+I + + +C+ + Q+
Sbjct: 223 YVINSFSK-YFSXTGWRVGWXVVPEDQVRVVERIAQ--NXFICAPHASQV 269
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 35/251 (13%)
Query: 190 PNDIFLTDGASPAVHMMMQLLIRSENDGIL-CPIPQYPLYSASIALHG--GTLVPYYLDE 246
P + ++ GA + ++++ D IL CP P Y +YS S G VP LD
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCP-PTYGMYSVSAETIGVECRTVPT-LD- 131
Query: 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306
W L+ + +L+ V+ + V +P NPTGQ++ ++ R +++ + + +V
Sbjct: 132 --NWQLDLQGISDKLDG-------VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIV- 181
Query: 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366
+ADE Y E + P+ G+ + L +++SK + G R G+ T
Sbjct: 182 VADEAYIE--FCPQASLA---------GWLAEYPHLAILRTLSKA-FALAGLRCGF---T 226
Query: 367 GFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKV--GDESYESYCAERDGILSSLAR 424
+ EV + KV + S I A+ +SP + E AER+ ++++L +
Sbjct: 227 LANEEVINLLMKVIAPYPLSTPVADI-AAQALSPQGIVAMRERVAQIIAEREYLIAAL-K 284
Query: 425 RAKTLEDAFNS 435
+E F+S
Sbjct: 285 EIPCVEQVFDS 295
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 151 ILDQIPGRATGA-YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209
I+D + R Y ++ ++I + R + + + G PA+ +++
Sbjct: 50 IIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINE 109
Query: 210 LIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269
L ++ ND I+ P Y +++ + + L+ L + LE E + K
Sbjct: 110 LTKA-NDKIMIQEPVYSPFNSVVKNNNRELIISPLQK-----LENGNYIMDYEDIENKIK 163
Query: 270 TVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314
V+ ++ NP NP G+V ++ + + D C K + +++DE++ +
Sbjct: 164 DVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSD 208
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 35/251 (13%)
Query: 190 PNDIFLTDGASPAVHMMMQLLIRSENDGIL-CPIPQYPLYSASIALHG--GTLVPYYLDE 246
P + ++ GA + ++++ D IL CP P Y YS S G VP LD
Sbjct: 75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCP-PTYGXYSVSAETIGVECRTVPT-LD- 131
Query: 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306
W L+ + +L+ V+ + V +P NPTGQ++ ++ R +++ + + +V
Sbjct: 132 --NWQLDLQGISDKLDG-------VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIV- 181
Query: 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366
+ADE Y E + P+ G+ + L +++SK + G R G+ T
Sbjct: 182 VADEAYIE--FCPQASL---------AGWLAEYPHLAILRTLSKA-FALAGLRCGF---T 226
Query: 367 GFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKV--GDESYESYCAERDGILSSLAR 424
+ EV + KV + S I A+ +SP + E AER+ ++++L +
Sbjct: 227 LANEEVINLLXKVIAPYPLSTPVADI-AAQALSPQGIVAXRERVAQIIAEREYLIAAL-K 284
Query: 425 RAKTLEDAFNS 435
+E F+S
Sbjct: 285 EIPCVEQVFDS 295
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 101/270 (37%), Gaps = 26/270 (9%)
Query: 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 250
+++ L G S + +M I D L P P +P Y +G + Y W
Sbjct: 105 DNVVLCSGGSHGI-LMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDW 163
Query: 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310
+ E+++ K + L+V NP NP G + ++ IV ++ L L +DE
Sbjct: 164 EADLDEIRR------LKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDE 217
Query: 311 VYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG--YMEVTGF 368
+Y V+ + +F V+ E + V + + G Y++ G
Sbjct: 218 IYAGMVFKGKDPNATFTSVADF----ETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHGN 273
Query: 369 SAEVREQIYKVASV--NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426
E + +V + C+ + + +L+ +P + D I++ + A
Sbjct: 274 GPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQE-----------HLDQIVAKIEESA 322
Query: 427 KTLEDAFNSLEGITCNKAEGAMYLFPRIQL 456
L + G+ GAMYL RI L
Sbjct: 323 MYLYNHIGECIGLAPTMPRGAMYLMSRIDL 352
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 183 RDGFPADPNDIFLTDGASPAV----HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGT 238
+D A+ D+F T+G + A+ H + + + + D I P + Y L
Sbjct: 157 KDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYE 216
Query: 239 LVPYYLD--EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296
LV L E W +E +E++K K +++AL+V+NP NPT + AI
Sbjct: 217 LVEVDLHSYEKNDWEIEPNEIEK------LKDPSIKALIVVNPTNPTSKEFDTNALNAIK 270
Query: 297 DFCKKE-GLVLLADEVYQENVYVPEKK 322
+K L +++DEVY +VP K
Sbjct: 271 QAVEKNPKLXIISDEVY--GAFVPNFK 295
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 475 YCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTDFHKNFMDKFR 532
+ +L G+VLV G GFG PG LP ED I ++ + K + ++F+
Sbjct: 474 FLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTED-YALIGKQVLELLKEYYEEFK 530
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 153 DQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212
D + + T + H + ++ L + ++ R P ++ +T GA A++ +Q +
Sbjct: 67 DPLANQYTRGFGHPRLVQALSKLYSQLVD-RTINPM--TEVLVTVGAYEALYATIQGHV- 122
Query: 213 SENDGILCPIPQYPLYSASIALHGGT--LVPYYLDEATG------WGLETSEVKKQLEAA 264
E D ++ P + Y + GG +P ++ G W L+ +E++
Sbjct: 123 DEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK 182
Query: 265 KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319
+ +++ P NP G+V+ + + CKK ++ ++DEVY+ V+ P
Sbjct: 183 ------TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP 231
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 153 DQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212
D + + T + H + ++ L + ++ R P ++ +T GA A++ +Q +
Sbjct: 67 DPLANQYTRGFGHPRLVQALSKLYSQLVD-RTINPM--TEVLVTVGAYEALYATIQGHV- 122
Query: 213 SENDGILCPIPQYPLYSASIALHGGT--LVPYYLDEATG------WGLETSEVKKQLEAA 264
E D ++ P + Y + GG +P ++ G W L+ +E++
Sbjct: 123 DEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK 182
Query: 265 KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319
+ +++ P NP G+V+ + + CKK ++ ++DEVY+ V+ P
Sbjct: 183 ------TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP 231
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS 229
+ + D I + + + I + G PA+ +Q + EN+ +L P YP +
Sbjct: 62 ENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTK-ENESVLVQPPIYPPFF 120
Query: 230 ASIALHGGTLVPYYLDEATG-WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288
+ + L L + + ++ ++KQ + V+ ++ +P NP G+V
Sbjct: 121 EXVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQG------VKLXLLCSPHNPIGRVWK 174
Query: 289 EENQRAIVDFCKKEGLVLLADEVYQENVY 317
+E + C K ++++ADE++ + +Y
Sbjct: 175 KEELTKLGSLCTKYNVIVVADEIHSDIIY 203
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 126/301 (41%), Gaps = 34/301 (11%)
Query: 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPA-DPNDIFLTDGASPAVHMMMQLLIRSENDGI 218
T YS ++G L+ I +E G D +++ T G+ A+ ++ +L + E+ +
Sbjct: 78 TLQYSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCV 137
Query: 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA---LV 275
L P Y +I L + + G + + ++++L G + V
Sbjct: 138 L----DDPAYLGAINAFRQYLANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYV 193
Query: 276 VINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335
V N NP G + E ++A+V+ +K L ++ D+ Y Y E FK +G
Sbjct: 194 VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK-----IGG 248
Query: 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILAS 395
E+ + L +F V G R G V G +R+ + S +LCS LA+
Sbjct: 249 PERVVLLNTFSKVLA-----PGLRIG--XVAGSKEFIRKIVQAKQSADLCSPAITHRLAA 301
Query: 396 LVMSPPKVGDESYESYCAERDGILSSLARRAKT-----LEDAFNSLEGITCNKAEGAMYL 450
+ E Y+ + I L RR +T LE+ F+ + G+ K+EG +++
Sbjct: 302 RYL-------ERYDLLEQLKPTI--ELYRRKRTVXLNALEEYFSDIPGVKWVKSEGGLFI 352
Query: 451 F 451
+
Sbjct: 353 W 353
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 156/442 (35%), Gaps = 83/442 (18%)
Query: 119 REVLALCDHPSILDRSETQGLFSADSIER-AWQILDQIPGRATG--------AYSHSQGI 169
RE+ + HP++ + L + D+ E QI + A G Y QG
Sbjct: 59 RELEHIEKHPNV----QLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRGYGLEQGN 114
Query: 170 KGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS 229
K LR IA RD N++F++DGA + + QLL+ S N I P +P Y
Sbjct: 115 KTLRKAIAETF-YRD-LHVKSNEVFVSDGAQSDISRL-QLLLGS-NVTIAVQDPTFPAYI 170
Query: 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK-----------GITVRALVVI- 277
S + G T G + KK +T R V+
Sbjct: 171 DSSVIIGQT------------GHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFF 218
Query: 278 -NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336
+P NPTG V + + +VDF K G +++ D Y ++ + S ++ G
Sbjct: 219 CSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYA--AFIEDGSPRSIYEIP---GAR 273
Query: 337 EKDISLVSFQSVSKGYYGECGKRGGY-------MEVTGFSAEVREQIYKVASVNLCSNIS 389
E I + SF + G G R G+ + GF S N SNI+
Sbjct: 274 EVAIEVSSFSK----FAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIA 329
Query: 390 GQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDAFNSLEGITCNKAEGAMY 449
+ + S S +Y E K L D SL G+ A Y
Sbjct: 330 QAGGLACLSSGGLKEIRSVNNYYKE----------NRKILMDTLVSL-GLKVYGGVNAPY 378
Query: 450 LFPRIQLPXXXXXXXXXXXTVPDAFYCRRLLNATGIVLVPGSGFGQVPGTWHFRCTILPQ 509
L+ + D F +L T I+ VPGSGFG G + R + +
Sbjct: 379 LWVHFKGSKSW-----------DVF--NEILENTHIITVPGSGFGP-GGEEYLRISGFGR 424
Query: 510 EDKIPAIVTRLTDFHKNFMDKF 531
D I RL +F F
Sbjct: 425 RDHIVEASKRLQNFFNTRTKHF 446
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 31/212 (14%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y QG LR+ +A+ G AD +IF++DG+ + +Q++ S+ +
Sbjct: 107 YGAEQGQGALREAVASTFYGHAGRAAD--EIFISDGSKCDI-ARIQMMFGSKPT-VAVQD 162
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVK---------KQLEAAKAKGITVRA 273
P YP+Y + + G T + G G + E L AK I
Sbjct: 163 PSYPVYVDTSVMMGMT------GDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDI---- 212
Query: 274 LVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333
+ +P NPTG +V+F +K G +L+ D Y + P+ K +
Sbjct: 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCP----KTIYEIP 268
Query: 334 GYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365
G E I SF Y G G R G+ V
Sbjct: 269 GADEVAIETCSFSK----YAGFTGVRLGWTVV 296
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 33/178 (18%)
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT--VRALVVINPG 280
P + Y ++A G + + L EA GW QL A + +T + L + P
Sbjct: 106 PGFAEYGRALAQSGCEIRRWSLREADGW---------QLTDAILEALTPDLDCLFLCTPN 156
Query: 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVY-----QENVYVPEKKFHSFKKVSRSMGY 335
NPTG + +AI D CK + L+ DE + E ++P K + V RS+
Sbjct: 157 NPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSL-- 214
Query: 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQI 392
+Y G R GY+ + +A R + ++ SVN + ++G++
Sbjct: 215 --------------TKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAALAGEV 258
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 189 DP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYL-DE 246
DP ++ +T GA+ A+ + L+ ++ +L P Y YS +A+ G V L +
Sbjct: 84 DPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIE-PFYDSYSPVVAMAGAHRVTVPLVPD 142
Query: 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306
G+ L+ +++ + RAL++ +P NPTG VL+ AI + LV+
Sbjct: 143 GRGFALDADALRRAVTP------RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVV 196
Query: 307 LADEVYQENVY 317
+ DEVY+ V+
Sbjct: 197 ITDEVYEHLVF 207
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 21/234 (8%)
Query: 119 REVLALCDHPSILDRS---ETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDT 175
RE+L L P IL + LF + A + + G YS ++G LR
Sbjct: 23 RELLKLTQRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAF 82
Query: 176 IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH 235
+A I R P ++ +T G+ A+ ++ ++ + E +L P Y + L
Sbjct: 83 VAEWIGVR------PEEVLITTGSQQALDLVGKVFL-DEGSPVLLEAPSYMGAIQAFRLQ 135
Query: 236 GGTLVPYYLDEATGW-GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294
G P +L G G + +++ L+ + + + + + + NPTG + ++
Sbjct: 136 G----PRFLTVPAGEEGPDLDALEEVLKRERPRFLYL----IPSFQNPTGGLTPLPARKR 187
Query: 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348
++ + GLV++ D+ Y+E +Y E + S +++R GY I L SF V
Sbjct: 188 LLQMVMERGLVVVEDDAYRE-LYFGEARLPSLFELAREAGY-PGVIYLGSFSKV 239
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 195 LTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYL-DEATGWGLE 253
G PA+ ++ S D IL P Y + + I +G ++ L E + + +
Sbjct: 90 FASGVVPAISAXVRQFT-SPGDQILVQEPVYNXFYSVIEGNGRRVISSDLIYENSKYSVN 148
Query: 254 TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313
++++++L +VR V NP NP G +EE + I + C K ++L++DE++
Sbjct: 149 WADLEEKLATP-----SVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHG 203
Query: 314 ENVYVPE 320
+ V E
Sbjct: 204 DLVLTDE 210
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL 252
I L +GAS + + + L + IL +P Y Y + HG ++V YLDE +
Sbjct: 81 IVLGNGASEIIELSISLF-----EKILIIVPSYAEYEINAKKHGVSVVFSYLDE--NMCI 133
Query: 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312
+ ++ +++ V ++++ NP NP G ++ +E ++ +++ ++ DE +
Sbjct: 134 DYEDIISKID-------DVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAF 186
Query: 313 QENVYVPEKKF 323
E P F
Sbjct: 187 IEFTGDPSSSF 197
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 29/163 (17%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y QG K LR IA G D D+F++DGA + + + N I
Sbjct: 94 YGAEQGAKPLRAAIAKTFYGGLGIGDD--DVFVSDGAKCDISRLQVMF--GSNVTIAVQD 149
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQ-----LEAAKAKGI-----TVR 272
P YP Y S + G T G ++V+K + G TV
Sbjct: 150 PSYPAYVDSSVIMGQT------------GQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG 197
Query: 273 ALVVI---NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312
+I +P NPTG E +V+F KK G +++ D Y
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 29/163 (17%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y QG K LR IA G D D+F++DGA + + + N I
Sbjct: 94 YGAEQGAKPLRAAIAKTFYGGLGIGDD--DVFVSDGAKCDISRLQVMF--GSNVTIAVQD 149
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQ-----LEAAKAKGI-----TVR 272
P YP Y S + G T G ++V+K + G TV
Sbjct: 150 PSYPAYVDSSVIMGQT------------GQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG 197
Query: 273 ALVVI---NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312
+I +P NPTG E +V+F KK G +++ D Y
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 29/163 (17%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y QG K LR IA G D D+F++DGA + + + N I
Sbjct: 94 YGAEQGAKPLRAAIAKTFYGGLGIGDD--DVFVSDGAKCDISRLQVMF--GSNVTIAVQD 149
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQ-----LEAAKAKGI-----TVR 272
P YP Y S + G T G ++V+K + G TV
Sbjct: 150 PSYPAYVDSSVIMGQT------------GQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG 197
Query: 273 ALVVI---NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312
+I +P NPTG E +V+F KK G +++ D Y
Sbjct: 198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 57/152 (37%), Gaps = 7/152 (4%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y QG K LR IA G D D+F++DGA + + N I
Sbjct: 94 YGAEQGAKPLRAAIAKTFYGGLGIGDD--DVFVSDGAKCDISRLQVXF--GSNVTIAVQD 149
Query: 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI--NPG 280
P YP Y S + G T + D +E + R ++ +P
Sbjct: 150 PSYPAYVDSSVIXGQT-GQFNTDVQKYGNIEYXRCTPENGFFPDLSTVGRTDIIFFCSPN 208
Query: 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312
NPTG E +V+F KK G +++ D Y
Sbjct: 209 NPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 173 RDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI 232
+ T+ ++ R + + I T G PAV ++ + DG++ P Y + +I
Sbjct: 72 KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKP-GDGVIIITPVYYPFFMAI 130
Query: 233 ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292
++ L E G+ T + +K + +K K +AL+ +P NP G+V ++
Sbjct: 131 KNQERKIIECELLEKDGY--YTIDFQKLEKLSKDKN--NKALLFCSPHNPVGRVWKKDEL 186
Query: 293 RAIVDFCKKEGLVLLADEVY 312
+ I D K L+L +DE++
Sbjct: 187 QKIKDIVLKSDLMLWSDEIH 206
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-LYSASIALHGGTLVPYYLDEAT 248
P I T+GA+ A +++ LI D ++ P Y LY +L G + + ++E
Sbjct: 81 PEQILQTNGATGANLLVLYSLIEP-GDHVISLYPTYQQLYDIPKSL-GAEVDLWQIEEEN 138
Query: 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308
GW L E +QL K I + N NPTG V +V+ + G +L+
Sbjct: 139 GW-LPDLEKLRQLIRPTTKXICIN-----NANNPTGAVXDRTYLEELVEIASEVGAYILS 192
Query: 309 DEVYQ 313
DEVY+
Sbjct: 193 DEVYR 197
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 183 RDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPY 242
R G+ A P IF +++ + +++ ++ P P YP + L T
Sbjct: 74 RYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSK-VIVPTPAYPPF---FHLLSATQREG 129
Query: 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302
+ATG G+ +V+K +A R++++ NP NP G V A E + D +
Sbjct: 130 IFIDATG-GINLHDVEKGFQAG------ARSILLCNPYNPLGXVFAPEWLNELCDLAHRY 182
Query: 303 GLVLLADEVYQENVY 317
+L DE++ V+
Sbjct: 183 DARVLVDEIHAPLVF 197
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI 222
Y G+ LR ++ + GF D +IF++DGA V + L N +
Sbjct: 71 YGPDFGLPALRQKLSE--DFYRGF-VDAKEIFISDGAK--VDLFRLLSFFGPNQTVAIQD 125
Query: 223 PQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281
P YP Y L G ++ + + E E + L + +P N
Sbjct: 126 PSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE-----------DTHIDILCLCSPNN 174
Query: 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319
PTG VL ++ RAIV + + +++L D Y + P
Sbjct: 175 PTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDP 212
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 18/90 (20%)
Query: 274 LVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333
+V+ NP NPTGQ L+ +D ++ LL DE Y + + SF+ +R +
Sbjct: 139 VVLANPSNPTGQALSAGE----LDQLRQRAGKLLIDETYVD--------YSSFR--ARGL 184
Query: 334 GYGEKDISLVSFQSVSKGYYGECGKRGGYM 363
YGE ++ F+S SK YG G R G +
Sbjct: 185 AYGENEL---VFRSFSKS-YGLAGLRLGAL 210
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 26/173 (15%)
Query: 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL------------ 210
YS+ QG D + + +I LT+G+ A + L
Sbjct: 79 YSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDK 138
Query: 211 -IRSENDGILCPI-PQYPLYSASI--ALHGGTLVPYYLDEATGWGLE-------TSEVKK 259
+S + IL P+ P+Y YS H ++P+ +DE T G E E +
Sbjct: 139 ESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPH-IDEVTHDGEEGFFKYRVDFEALE 197
Query: 260 QLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312
L A K I A+ P NPTG VL +E + + K+ + L+ D Y
Sbjct: 198 NLPALKEGRIG--AICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY 248
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 274 LVVIN-PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314
LV++N P NPTG+ L+ E + V K +L+ DE Y E
Sbjct: 157 LVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSE 198
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 24/184 (13%)
Query: 181 EARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL- 239
E D + + ++ T G + ++ ++L+ + + + P + Y + + G +
Sbjct: 75 EVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXAT-PTFVQYRQNALIEGAEVR 133
Query: 240 -VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298
+P D +++ L A K V + NP NPTG + + +A +D
Sbjct: 134 EIPLLQDGE-------HDLEGXLNAIDEKTTIVW---ICNPNNPTGNYIELADIQAFLDR 183
Query: 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358
+ LV+L DE Y E V P+ + H +K+ R+ +L+ ++ SK YG
Sbjct: 184 VPSDVLVVL-DEAYIEYV-TPQPEKH--EKLVRTYK------NLIITRTFSK-IYGLASA 232
Query: 359 RGGY 362
R GY
Sbjct: 233 RVGY 236
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 92/244 (37%), Gaps = 43/244 (17%)
Query: 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 250
N++ + +GA +++MM + RS + P P Y Y +A G
Sbjct: 77 NNVSVGNGADEIIYVMMLMFDRS----VFFP-PTYSCYRI-------------FAKAVGA 118
Query: 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310
+ K L + + + NP NPTG V E I+ K G + DE
Sbjct: 119 KFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDE 174
Query: 311 VYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370
Y E FH + + +K +L ++ SK + +R GY+ +
Sbjct: 175 AYYE--------FHG----ESYVDFLKKYENLAVIRTFSKA-FSLAAQRVGYVVAS---- 217
Query: 371 EVREQIYKVASVNLCSNIS--GQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKT 428
+ I V L N+S Q+ A + + ++ +E + ER+ + S+L
Sbjct: 218 --EKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYR 275
Query: 429 LEDA 432
+ D+
Sbjct: 276 ITDS 279
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 92/244 (37%), Gaps = 43/244 (17%)
Query: 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 250
N++ + +GA +++MM + RS + P P Y Y +A G
Sbjct: 89 NNVSVGNGADEIIYVMMLMFDRS----VFFP-PTYSCYRI-------------FAKAVGA 130
Query: 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310
+ K L + + + NP NPTG V E I+ K G + DE
Sbjct: 131 KFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDE 186
Query: 311 VYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370
Y E FH + + +K +L ++ SK + +R GY+ +
Sbjct: 187 AYYE--------FHG----ESYVDFLKKYENLAVIRTFSKA-FSLAAQRVGYVVAS---- 229
Query: 371 EVREQIYKVASVNLCSNIS--GQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKT 428
+ I V L N+S Q+ A + + ++ +E + ER+ + S+L
Sbjct: 230 --EKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYR 287
Query: 429 LEDA 432
+ D+
Sbjct: 288 ITDS 291
>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
pdb|4EU1|B Chain B, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
Length = 409
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 13/179 (7%)
Query: 196 TDGASPAVHMMMQLLIR--SENDGILCPIPQYPLYSASIALHGGTLVPY-YLDEATGWGL 252
T G + A+ + LL R + + I P YP + + A G L PY Y D AT GL
Sbjct: 110 TLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATK-GL 168
Query: 253 ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312
+ + + L+ A + LV NPTG ++ R + D K+ + D Y
Sbjct: 169 NLAGMLECLDKAPEGSVI---LVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAY 225
Query: 313 QENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371
Q + + +F V R + + +L+ QS S +G G R G + ++ SAE
Sbjct: 226 Q-GFATGQLDYDAF--VPRHL--VDMVPNLIVAQSFSXN-FGLYGHRCGALHISTASAE 278
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|B Chain B, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|C Chain C, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|D Chain D, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|E Chain E, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|F Chain F, Tyrosine Aminotransferase From E. Coli
Length = 397
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 14/95 (14%)
Query: 226 PLYSASIALHGG-----TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP- 279
P + +A+ G + P+Y DEAT G+ +++ L K + R++V+++P
Sbjct: 129 PTWENHVAIFAGAGFEVSTYPWY-DEATN-GVRFNDLLATL-----KTLPARSIVLLHPC 181
Query: 280 -GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313
NPTG L + A+++ K L+ D YQ
Sbjct: 182 CHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQ 216
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309
W + +K + A I + ++NP NPTG + + + K + D
Sbjct: 125 WAFDIEGLKAAVAAYSGPSI----VYLVNPNNPTGTITPADVIEPWIA-SKPANTXFIVD 179
Query: 310 EVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362
E Y E V P F+ +S + G ++I L+ ++ SK + G R GY
Sbjct: 180 EAYAEFVNDPR-----FRSISPXITQGAENIILL--KTFSK-IHAXAGXRVGY 224
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY4|B Chain B, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY5|A Chain A, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY5|B Chain B, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY8|A Chain A, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|1AY8|B Chain B, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|2AY1|A Chain A, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY1|B Chain B, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY2|A Chain A, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY2|B Chain B, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY3|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY3|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY4|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY4|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY5|A Chain A, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY5|B Chain B, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY6|A Chain A, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY6|B Chain B, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY7|A Chain A, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY7|B Chain B, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY8|A Chain A, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY8|B Chain B, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY9|A Chain A, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
pdb|2AY9|B Chain B, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
Length = 394
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 184 DGFPADPNDIFLTDGASPAVHMMMQLLIRSEND-GILCPIPQYPLYSASIALHGGTLVPY 242
DG ++ T G + A+ ++L + D + P +P + + + G + Y
Sbjct: 85 DGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTY 144
Query: 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302
+A G++ +K L AAK KG V L+ NPTG L + I +K
Sbjct: 145 RYFDAETRGVDFEGMKADLAAAK-KGDMV--LLHGCCHNPTGANLTLDQWAEIASILEKT 201
Query: 303 GLVLLADEVYQ 313
G + L D YQ
Sbjct: 202 GALPLIDLAYQ 212
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|B Chain B, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|C Chain C, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|D Chain D, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|E Chain E, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|F Chain F, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
Length = 397
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 226 PLYSASIALHGG-----TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP- 279
P + +A+ G + P+Y DEAT G+ +++ L+ +A I V+++P
Sbjct: 129 PTWENHVAIFAGAGFEVSTYPWY-DEATN-GVRFNDLLATLKTLQAGSI-----VLLHPC 181
Query: 280 -GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313
NPTG L + A+++ K L+ D YQ
Sbjct: 182 CHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQ 216
>pdb|1VBG|A Chain A, Pyruvate Phosphate Dikinase From Maize
pdb|1VBH|A Chain A, Pyruvate Phosphate Dikinase With Bound Mg-Pep From Maize
Length = 876
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 89 TNPGSHSFDEILYCNIGNPQSLGQQPITFFREV 121
TN G F EI+ +G PQ LG Q +T R+V
Sbjct: 698 TNQGVQVFPEIMVPLVGTPQELGHQ-VTLIRQV 729
>pdb|1TUO|A Chain A, Crystal Structure Of Putative Phosphomannomutase From
Thermus Thermophilus Hb8
Length = 464
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Query: 404 GDESYESYCAERDGILSSL------ARRAKTLEDAFNSLEGITCNKAEGAMYLFPRIQLP 457
G Y + ERDGIL+SL A K L + F +E +T G + + R+ LP
Sbjct: 335 GGVGYPEHLPERDGILTSLLLLESVAATGKDLAEQFKEVEALT-----GLTHAYDRLDLP 389
>pdb|1AOC|A Chain A, Japanese Horseshoe Crab Coagulogen
pdb|1AOC|B Chain B, Japanese Horseshoe Crab Coagulogen
Length = 175
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 122 LALCDHPSILDRSETQGLFSADSIERAWQILDQ---IPGRATGAYSH 165
+ LCD P +L R++ D IE+A + + Q + GR +SH
Sbjct: 7 ICLCDEPGVLGRTQIVTTEIKDKIEKAVEAVAQESGVSGRGFSIFSH 53
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 172 LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS 231
LRD +AA I + G ++++ +G++ ++Q L+++ + P YS
Sbjct: 71 LRDELAAYITKQTGVAVTRDNLWAANGSNE----ILQQLLQAFGGPGRTALGFQPSYSMH 126
Query: 232 IALHGGTLVPYYLDEATGWGLETS-EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290
L GT + A G + ++ LE +AK + + V P NPTG V + +
Sbjct: 127 PILAKGTHTEFI---AVSRGADFRIDMDVALEEIRAKQPDI--VFVTTPNNPTGDVTSLD 181
Query: 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPE-----KKFHSFKKVSRSM 333
+ I++ G+V++ DE Y E P +K+ + VSR+M
Sbjct: 182 DVERIINVAP--GIVIV-DEAYAEFSPSPSATTLLEKYPTKLVVSRTM 226
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 172 LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS 231
LRD +AA I + G ++++ +G++ ++Q L+++ + P YS
Sbjct: 74 LRDELAAYITKQTGVAVTRDNLWAANGSNE----ILQQLLQAFGGPGRTALGFQPSYSMH 129
Query: 232 IALHGGTLVPYYLDEATGWGLETS-EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290
L GT + A G + ++ LE +AK + + V P NPTG V + +
Sbjct: 130 PILAKGTHTEFI---AVSRGADFRIDMDVALEEIRAKQPDI--VFVTTPNNPTGDVTSLD 184
Query: 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPE-----KKFHSFKKVSRSM 333
+ I++ G+V++ DE Y E P +K+ + VSR+M
Sbjct: 185 DVERIINVAP--GIVIV-DEAYAEFSPSPSATTLLEKYPTKLVVSRTM 229
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 172 LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS 231
LRD +AA I + G ++++ +G++ ++Q L+++ + P YS
Sbjct: 74 LRDELAAYITKQTGVAVTRDNLWAANGSNE----ILQQLLQAFGGPGRTALGFQPSYSMH 129
Query: 232 IALHGGTLVPYYLDEATGWGLETS-EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290
L GT + A G + ++ LE +AK + + V P NPTG V + +
Sbjct: 130 PILAKGTHTEFI---AVSRGADFRIDMDVALEEIRAKQPDI--VFVTTPNNPTGDVTSLD 184
Query: 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPE-----KKFHSFKKVSRSM 333
+ I++ G+V++ DE Y E P +K+ + VSR+M
Sbjct: 185 DVERIINVAP--GIVIV-DEAYAEFSPSPSATTLLEKYPTKLVVSRTM 229
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334
V N NPTG L E ++ I + +K +++ D+ Y F F K R
Sbjct: 196 TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY---------FLQFNKF-RVPT 245
Query: 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA 394
+ D+ ++ S G R G++ TG + I + L + Q++
Sbjct: 246 FLSMDVDGRVIRADSFSXIISSGLRIGFL--TGPKPLIERVILHIQVSTLHPSTFNQLMI 303
Query: 395 SLVMSPPKVGDESY--------ESYCAERDGILSS 421
S ++ + G+E + + Y ++D IL++
Sbjct: 304 SQLLH--EWGEEGFMAHVDRVIDFYSNQKDAILAA 336
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334
V N NPTG L E ++ I + +K +++ D+ Y F F K R
Sbjct: 198 TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY---------FLQFNKF-RVPT 247
Query: 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA 394
+ D+ ++ S G R G++ TG + I + L + Q++
Sbjct: 248 FLSMDVDGRVIRADSFSXIISSGLRIGFL--TGPKPLIERVILHIQVSTLHPSTFNQLMI 305
Query: 395 SLVMSPPKVGDESY--------ESYCAERDGILSS 421
S ++ + G+E + + Y ++D IL++
Sbjct: 306 SQLLH--EWGEEGFMAHVDRVIDFYSNQKDAILAA 338
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 273 ALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312
+++ NP NPT Q +E R I + K ++++ D Y
Sbjct: 185 SIIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAY 224
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWG 251
D+ +T G+ + + +++I + D +L P Y S+ G ++ DE+ G
Sbjct: 110 DLCVTSGSQQGLXKVFEMII-NPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDES---G 165
Query: 252 LETSEVKKQL------EAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKKEGL 304
+ ++ L +A + T + L + N NPTG L E ++ I + +K
Sbjct: 166 IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225
Query: 305 VLLADEVY 312
+++ D+ Y
Sbjct: 226 LIIEDDPY 233
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334
V N NPTG L E ++ I + +K +++ D+ Y F F K R
Sbjct: 196 TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY---------FLQFNKF-RVPT 245
Query: 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA 394
+ D+ ++ S G R G++ TG + I + L + Q++
Sbjct: 246 FLSMDVDGRVIRADSFSKIISSGLRIGFL--TGPKPLIERVILHIQVSTLHPSTFNQLMI 303
Query: 395 SLVMSPPKVGDESY--------ESYCAERDGILSS 421
S ++ + G+E + + Y ++D IL++
Sbjct: 304 SQLLH--EWGEEGFMAHVDRVIDFYSNQKDAILAA 336
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334
V N NPTG L E ++ I + +K +++ D+ Y F F K R
Sbjct: 196 TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY---------FLQFNKF-RVPT 245
Query: 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA 394
+ D+ ++ S G R G++ TG + I + L + Q++
Sbjct: 246 FLSMDVDGRVIRADSFSKIISSGLRIGFL--TGPKPLIERVILHIQVSTLHPSTFNQLMI 303
Query: 395 SLVMSPPKVGDESY--------ESYCAERDGILSS 421
S ++ + G+E + + Y ++D IL++
Sbjct: 304 SQLLH--EWGEEGFMAHVDRVIDFYSNQKDAILAA 336
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334
V N NPTG L E ++ I + +K +++ D+ Y F F K R
Sbjct: 196 TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYY---------FLQFNKF-RVPT 245
Query: 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA 394
+ D+ ++ S G R G++ TG + I + L + Q++
Sbjct: 246 FLSMDVDGRVIRADSFSKIISSGLRIGFL--TGPKPLIERVILHIQVSTLHPSTFNQLMI 303
Query: 395 SLVMSPPKVGDESY--------ESYCAERDGILSS 421
S ++ + G+E + + Y ++D IL++
Sbjct: 304 SQLLH--EWGEEGFMAHVDRVIDFYSNQKDAILAA 336
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 181 EARDGFPADPND--IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY--SASIALHG 236
E R G DP + L H+++ L D +L P YP Y +A +A
Sbjct: 77 EGRYGVGLDPRREALALIGSQEGLAHLLLAL--TEPEDLLLLPEVAYPSYFGAARVASLR 134
Query: 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296
L+P D GL +++K E + + L++ P NPTG V +
Sbjct: 135 TFLIPLRED-----GL--ADLKAVPEGVWREA---KVLLLNYPNNPTGAVADWGYFEEAL 184
Query: 297 DFCKKEGLVLLADEVYQENVY 317
+K GL L+ D Y + VY
Sbjct: 185 GLARKHGLWLIHDNPYVDQVY 205
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 15/17 (88%)
Query: 478 RLLNATGIVLVPGSGFG 494
R+ + TGIVL+PG+GFG
Sbjct: 474 RIADETGIVLLPGAGFG 490
>pdb|3L6E|A Chain A, Crystal Structure Of Putative Short Chain
DehydrogenaseREDUCTASE Family Oxidoreductase From
Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966
pdb|3L6E|B Chain B, Crystal Structure Of Putative Short Chain
DehydrogenaseREDUCTASE Family Oxidoreductase From
Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966
Length = 235
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 355 ECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNI------------SGQILASLVMSPPK 402
C G + V ++AE QI +V NL S I G +LA+++ S +
Sbjct: 83 HCAGTGEFGPVGVYTAE---QIRRVXESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQ 139
Query: 403 VGDESYESYCAERDGILSSLARRAKTLEDA 432
VG + YCA + G L L+D+
Sbjct: 140 VGKANESLYCASKWGXRGFLESLRAELKDS 169
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 275 VVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY 312
V N NPTG L E ++ I + +K +++ D+ Y
Sbjct: 196 TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPY 233
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 278 NPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337
NP NPTG V E I+ K G + DE Y E FH + + +
Sbjct: 146 NPNNPTGHVFEREEIERIL----KTGAFVALDEAYYE--------FHG----ESYVDFLK 189
Query: 338 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNIS--GQILAS 395
K +L ++ SK + +R GY+ + + I V L N+S Q A
Sbjct: 190 KYENLAVIRTFSKA-FSLAAQRVGYVVAS------EKFIDAYNRVRLPFNVSYVSQXFAK 242
Query: 396 LVMSPPKVGDESYESYCAERDGILSSLARRAKTLEDA 432
+ + ++ +E + ER+ S+L + D+
Sbjct: 243 VALDHREIFEERTKFIVEERERXKSALREXGYRITDS 279
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,325,473
Number of Sequences: 62578
Number of extensions: 570534
Number of successful extensions: 1751
Number of sequences better than 100.0: 97
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1619
Number of HSP's gapped (non-prelim): 119
length of query: 533
length of database: 14,973,337
effective HSP length: 103
effective length of query: 430
effective length of database: 8,527,803
effective search space: 3666955290
effective search space used: 3666955290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)